Citrus Sinensis ID: 018381
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 357 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.983 | 0.720 | 0.740 | 1e-159 | |
| Q944A7 | 512 | Probable serine/threonine | no | no | 0.994 | 0.693 | 0.680 | 1e-147 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.952 | 0.731 | 0.474 | 2e-94 | |
| Q9LFP7 | 493 | Probable receptor-like pr | no | no | 0.498 | 0.361 | 0.361 | 2e-23 | |
| Q9SRH7 | 490 | Receptor-like serine/thre | no | no | 0.498 | 0.363 | 0.341 | 9e-22 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.504 | 0.439 | 0.353 | 1e-21 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.504 | 0.436 | 0.353 | 4e-21 | |
| Q8H186 | 389 | Probable receptor-like pr | no | no | 0.515 | 0.473 | 0.316 | 7e-21 | |
| O48814 | 395 | Serine/threonine-protein | no | no | 0.588 | 0.531 | 0.309 | 9e-21 | |
| O49839 | 426 | Protein kinase 2A, chloro | no | no | 0.501 | 0.420 | 0.317 | 2e-20 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 561 bits (1447), Expect = e-159, Method: Compositional matrix adjust.
Identities = 263/355 (74%), Positives = 303/355 (85%), Gaps = 4/355 (1%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPNETL+KHLFHWE+QPMKWAMR+RVAL++AQAL+YC+SKGRALYHDLN YR+LFD D N
Sbjct: 135 MPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDAN 194
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESV+YSFGTLLLDLLSGKHIPPS
Sbjct: 195 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 254
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIR +N MLMDS LEG FS+DDGTEL+RLASRCLQYEPRERPN KSLV+++ PLQ
Sbjct: 255 HALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQ 314
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
K+ E+ S+ L+G+P+ +T L+PLGEAC R DLTAIHEI+EK+GYKDDEG EL
Sbjct: 315 KDLEIASHQLLGVPNSATTT----ALSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTEL 370
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQMWTDQ+Q+TL KK+GD+AFR KDF AIECY+ FI+ GTM SPTV AR+ LCYL++
Sbjct: 371 SFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMN 430
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355
DMP+EAL +AMQAQVISP W A YLQA AL LG N+A LKDG LE+K++
Sbjct: 431 DMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAMLESKRN 485
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 521 bits (1343), Expect = e-147, Method: Compositional matrix adjust.
Identities = 243/357 (68%), Positives = 290/357 (81%), Gaps = 2/357 (0%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPN+TL+KHLFHWENQ ++WAMR+RV Y+A+ALDYCS++GR LYHDLN YR+LFD+DG+
Sbjct: 152 MPNDTLAKHLFHWENQTIEWAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGD 211
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLA+TPPEYLR GRV PESV YSFGT+LLDLLSGKHIPPS
Sbjct: 212 PRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPS 271
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALD+IRGKN ++LMDS LEG FS ++ T +V LAS+CLQYEPRERPN K LVA+L PLQ
Sbjct: 272 HALDMIRGKNIILLMDSHLEGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQ 331
Query: 181 KEAEVPSYTLMGI-PHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANE 239
+++VPSY ++GI A + L+PLGEACSR+DLTAIH+IL Y+DDEG NE
Sbjct: 332 TKSDVPSYVMLGIKKQEEAPSTPQRPLSPLGEACSRMDLTAIHQILVMTHYRDDEG-TNE 390
Query: 240 LSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL 299
LSFQ WT Q+++ L+++KRGD +FR KDF TAI+CY+ FID GTMVSPTVF RR LCYLL
Sbjct: 391 LSFQEWTQQMKDMLDARKRGDQSFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLL 450
Query: 300 SDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHR 356
D P AL DAMQAQ + PDWPTAFY+Q+ AL L MN DA + L + LE K+ R
Sbjct: 451 CDQPDAALRDAMQAQCVYPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKRQR 507
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 345 bits (886), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 168/354 (47%), Positives = 236/354 (66%), Gaps = 14/354 (3%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
M N+TL+K LF + Q M W++R+RVA ++A+ALDYC++ G A Y++L+ Y++LFD+DG+
Sbjct: 126 MANDTLAKRLFQRKYQTMDWSIRLRVAYFVAEALDYCNTAGFASYNNLSAYKVLFDEDGD 185
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
LSCFGLMK + + + TG V PE+V+Y FGT+L++LLSGK IPPS
Sbjct: 186 ACLSCFGLMKEINNDQ-------------ITTGSVNPENVIYRFGTVLVNLLSGKQIPPS 232
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HA ++I KN LMD L+G FS D+ + +LAS+CL+YE +E PN K +VA+L LQ
Sbjct: 233 HAPEMIHRKNVFKLMDPYLKGKFSIDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQ 292
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
E PSY ++ + + + L+PLGEAC R+DL +IH IL GY DD+ I EL
Sbjct: 293 TRTEAPSYEVVEMTNQEKDASSSSNLSPLGEACLRMDLASIHSILVLAGYDDDKDII-EL 351
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SF+ W +++E + ++ GD AF +DF TAI CY+ F++ ++V P+V+ARR L YL
Sbjct: 352 SFEEWIQEVKELQDVRRNGDRAFVEQDFKTAIACYSQFVEERSLVYPSVYARRSLSYLFC 411
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354
D P++AL D M AQ + PDWPTAFYLQ+ AL L MN D+ +TLK+ LE KK
Sbjct: 412 DEPEKALLDGMHAQGVFPDWPTAFYLQSVALAKLDMNTDSADTLKEAALLEVKK 465
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Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 111/199 (55%), Gaps = 21/199 (10%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG--RALYHDLNTYRILFDQD 58
MP +L HLF + P+ W++R+++AL A+ L + + +Y D T IL D D
Sbjct: 228 MPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDAD 286
Query: 59 GNPRLSCFGLMKNSRD-GKSY-STNL----AFTPPEYLRTGRVIPESVVYSFGTLLLDLL 112
N +LS FGL K++ D GK++ ST + + PEY+ TG + +S VYSFG +LL++L
Sbjct: 287 YNAKLSDFGLAKDAPDEGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 346
Query: 113 SG-----KHIPPS-HAL------DLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 160
+G K+ P H L L+ + F L+D LEGHFS ++ +LA++CL
Sbjct: 347 TGRRSMDKNRPNGEHNLVEWARPHLLDKRRFYRLLDPRLEGHFSIKGAQKVTQLAAQCLS 406
Query: 161 YEPRERPNAKSLVASLTPL 179
+P+ RP +V +L PL
Sbjct: 407 RDPKIRPKMSDVVEALKPL 425
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SRH7|Y3130_ARATH Receptor-like serine/threonine-protein kinase At3g01300 OS=Arabidopsis thaliana GN=At3g01300 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 21/199 (10%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG--RALYHDLNTYRILFDQD 58
MP +L HLF + P+ W++R+++AL A+ L + + +Y D T IL D +
Sbjct: 222 MPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDGE 280
Query: 59 GNPRLSCFGLMKNSRD-GKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLL 112
N +LS FGL K++ D GK++ + + PEY+ TG + +S VYSFG +LL++L
Sbjct: 281 YNAKLSDFGLAKDAPDEGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 340
Query: 113 SG-----KHIPPS-HAL------DLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 160
+G K+ P H L L+ + F L+D LEGHFS ++ +LA++CL
Sbjct: 341 TGRRSMDKNRPNGEHNLVEWARPHLLDKRRFYRLLDPRLEGHFSVKGAQKVTQLAAQCLS 400
Query: 161 YEPRERPNAKSLVASLTPL 179
+ + RP +V L PL
Sbjct: 401 RDSKIRPKMSEVVEVLKPL 419
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 108/201 (53%), Gaps = 21/201 (10%)
Query: 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYC-SSKGRALYHDLNTYRILFDQ 57
MP +L HLF QP+ W +R++VAL A+ L + SS+ R +Y D T IL D
Sbjct: 154 MPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDS 213
Query: 58 DGNPRLSCFGLMKNSRDG-KSY-STNL----AFTPPEYLRTGRVIPESVVYSFGTLLLDL 111
+ N +LS FGL K+ G KS+ ST + + PEYL TG + +S VYSFG +LL+L
Sbjct: 214 EYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLEL 273
Query: 112 LSGKHIP----PSHALDLIR--------GKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159
LSG+ PS +L+ + ++D+ L+ +S ++ ++ L+ RCL
Sbjct: 274 LSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCL 333
Query: 160 QYEPRERPNAKSLVASLTPLQ 180
E + RPN +V+ L +Q
Sbjct: 334 TTEIKLRPNMSEVVSHLEHIQ 354
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 111/201 (55%), Gaps = 21/201 (10%)
Query: 1 MPNETLSKHLFHWEN--QPMKWAMRVRVALYLAQALDYC-SSKGRALYHDLNTYRILFDQ 57
MP +L HLF + QP+ W +R++VAL A+ L + +++ +Y D T IL D
Sbjct: 155 MPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDS 214
Query: 58 DGNPRLSCFGLMKNSRDG-KSY-STNL----AFTPPEYLRTGRVIPESVVYSFGTLLLDL 111
+ N +LS FGL K+ G KS+ ST + + PEYL TG + +S VYS+G +LL++
Sbjct: 215 EYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEV 274
Query: 112 LSG-----KHIPPSH------ALDLIRGKNFLM-LMDSCLEGHFSNDDGTELVRLASRCL 159
LSG K+ PP A L+ K L ++D+ L+ +S ++ ++ LA RCL
Sbjct: 275 LSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCL 334
Query: 160 QYEPRERPNAKSLVASLTPLQ 180
+E + RPN +V+ L +Q
Sbjct: 335 TFEIKLRPNMNEVVSHLEHIQ 355
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 28/212 (13%)
Query: 1 MPNETLSKHLFHWENQ---PMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFD 56
M +L HLF N+ P+ W +R++VAL A+ L + S + +Y D+ IL D
Sbjct: 147 MHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLD 206
Query: 57 QDGNPRLSCFGLMKNSRDG----KSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTL 107
D N +LS FGL +RDG +SY + + PEY+ TG + S VYSFG +
Sbjct: 207 SDFNAKLSDFGL---ARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVV 263
Query: 108 LLDLLSGK----HIPPSHALDLI--------RGKNFLMLMDSCLEGHFSNDDGTELVRLA 155
LL+LL G+ H P+ +L+ + L+++D+ L + + L +A
Sbjct: 264 LLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIA 323
Query: 156 SRCLQYEPRERPNAKSLVASLTPLQKEAEVPS 187
+CL +EP+ RP +V +L LQ P+
Sbjct: 324 VQCLSFEPKSRPTMDQVVRALVQLQDSVVKPA 355
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O48814|BIK1_ARATH Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 29/239 (12%)
Query: 1 MPNETLSKHLFHWEN--QPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQ 57
M +L HLF +P+ W +RV VAL A+ L + S + +Y D+ IL D
Sbjct: 153 MQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDA 212
Query: 58 DGNPRLSCFGLMKNSRDGK-SYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL 111
D N +LS FGL ++ G SY + + PEY+ +G + S VYSFG LLL++
Sbjct: 213 DYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEI 272
Query: 112 LSGK----HIPPSHALDLI--------RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159
LSGK H P+ +L+ + L+++D+ L+ + ++ + +A +CL
Sbjct: 273 LSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCL 332
Query: 160 QYEPRERPNAKSLVASLTPLQKEAEVPSYT-------LMGIPHGTA-STKQTITLTPLG 210
+EP+ RP +V +L LQ PS T +G GT S+++ T P G
Sbjct: 333 SFEPKSRPTMDQVVRALQQLQDNLGKPSQTNPVKDTKKLGFKTGTTKSSEKRFTQKPFG 391
|
Required to activate the resistance responses to necrotrophic pathogens. Phosphorylates FLS2 and BAK1. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49839|APK2A_ARATH Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 100/208 (48%), Gaps = 29/208 (13%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYC-SSKGRALYHDLNTYRILFDQDG 59
MP +L HLF QP+ WA+R++VA+ A+ L + +K + +Y D IL D D
Sbjct: 172 MPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADF 231
Query: 60 NPRLSCFGLMKN--SRDGKSYSTNL----AFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 113
N +LS FGL K + D ST + + PEY+ TGR+ +S VYSFG +LL+L+S
Sbjct: 232 NAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELIS 291
Query: 114 GKHIPPSHALDLIRGKN-----------------FLMLMDSCLEGHFSNDDGTELVRLAS 156
G+ A+D G N +MD+ L G + LA
Sbjct: 292 GR-----RAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLAL 346
Query: 157 RCLQYEPRERPNAKSLVASLTPLQKEAE 184
+CL + + RP ++ +L L+ A+
Sbjct: 347 QCLNPDAKLRPKMSEVLVTLEQLESVAK 374
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 357 | ||||||
| 255558866 | 487 | receptor protein kinase, putative [Ricin | 1.0 | 0.733 | 0.904 | 0.0 | |
| 224059396 | 477 | predicted protein [Populus trichocarpa] | 1.0 | 0.748 | 0.890 | 0.0 | |
| 297745973 | 490 | unnamed protein product [Vitis vinifera] | 0.997 | 0.726 | 0.896 | 0.0 | |
| 359478579 | 512 | PREDICTED: probable serine/threonine-pro | 0.997 | 0.695 | 0.893 | 0.0 | |
| 224106345 | 475 | predicted protein [Populus trichocarpa] | 0.994 | 0.747 | 0.898 | 0.0 | |
| 145334843 | 359 | putative receptor protein kinase [Arabid | 1.0 | 0.994 | 0.873 | 0.0 | |
| 297796847 | 489 | hypothetical protein ARALYDRAFT_496029 [ | 1.0 | 0.730 | 0.873 | 0.0 | |
| 22327962 | 489 | putative receptor protein kinase [Arabid | 1.0 | 0.730 | 0.873 | 0.0 | |
| 449450772 | 485 | PREDICTED: probable serine/threonine-pro | 0.994 | 0.731 | 0.876 | 0.0 | |
| 225440554 | 491 | PREDICTED: probable serine/threonine-pro | 1.0 | 0.727 | 0.868 | 0.0 |
| >gi|255558866|ref|XP_002520456.1| receptor protein kinase, putative [Ricinus communis] gi|223540298|gb|EEF41869.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/357 (90%), Positives = 341/357 (95%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPNETLSKHLFHWENQPMKWAMR+RVAL+LAQAL+YCSSKGRALYHDLN YRILFDQDGN
Sbjct: 131 MPNETLSKHLFHWENQPMKWAMRLRVALFLAQALEYCSSKGRALYHDLNAYRILFDQDGN 190
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS
Sbjct: 191 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 250
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HA+DLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ+EPRERPNAK+LV +LT LQ
Sbjct: 251 HAIDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQHEPRERPNAKTLVTALTHLQ 310
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
KE EVPSY LMGIPHG AS K T++LTPLGEACSR+DLTAIHEIL+KVGYKDDEGIANEL
Sbjct: 311 KETEVPSYALMGIPHGAASPKPTVSLTPLGEACSRMDLTAIHEILQKVGYKDDEGIANEL 370
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQMWTDQIQETLN KKRGDAAFR KDF TAI+CYT FID GTMVSPTVFARRCLCYL+S
Sbjct: 371 SFQMWTDQIQETLNCKKRGDAAFRTKDFATAIDCYTQFIDVGTMVSPTVFARRCLCYLIS 430
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 357
DMPQEALGDAMQAQ +SP+WPTAFYLQAAALF LGM++DAQETLKDGT LEA+KHRN
Sbjct: 431 DMPQEALGDAMQAQAVSPEWPTAFYLQAAALFSLGMDSDAQETLKDGTTLEAQKHRN 487
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224059396|ref|XP_002299839.1| predicted protein [Populus trichocarpa] gi|222847097|gb|EEE84644.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/357 (89%), Positives = 337/357 (94%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPNETLSKHLFHWENQPMKWAMR+RVALYLAQAL+YCSSKGRALYHD N YRILFDQDGN
Sbjct: 121 MPNETLSKHLFHWENQPMKWAMRLRVALYLAQALEYCSSKGRALYHDFNAYRILFDQDGN 180
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESVVYSFGTLLLDLLSGKHIPPS
Sbjct: 181 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPS 240
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ+E RERPNAKSLV +LTPL
Sbjct: 241 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQFEARERPNAKSLVTALTPLL 300
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
K+ +VPSY LMGIPHGT S KQT++LTPLGEACSRLDLTAIHE+LEKVGY DDEGIANEL
Sbjct: 301 KDTQVPSYILMGIPHGTESPKQTMSLTPLGEACSRLDLTAIHEMLEKVGYNDDEGIANEL 360
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQMWTDQIQETLN KKRGDAAFRAKDF AI+CYT FIDGGTMVSPTVFARRCLCYL+S
Sbjct: 361 SFQMWTDQIQETLNCKKRGDAAFRAKDFNAAIDCYTQFIDGGTMVSPTVFARRCLCYLIS 420
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 357
D+PQ+ALGDAMQAQ +SP+WPTAFYLQAA+LF LGM+ DAQETLKDG++LEAK H N
Sbjct: 421 DLPQQALGDAMQAQAVSPEWPTAFYLQAASLFSLGMDTDAQETLKDGSSLEAKNHGN 477
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297745973|emb|CBI16029.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/356 (89%), Positives = 336/356 (94%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPNETLSKHLFHWE QPMKWAMR+RVALYLAQAL+YCSSKGRALYHDLN YR+LFDQDGN
Sbjct: 134 MPNETLSKHLFHWEAQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGN 193
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV ESVVYSFGTLLLDLLSGKHIPPS
Sbjct: 194 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTAESVVYSFGTLLLDLLSGKHIPPS 253
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA+SLV SLTPLQ
Sbjct: 254 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNARSLVTSLTPLQ 313
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
KE EVPSY LMGI T S +T+ LTPLGEACSR+DLTAIHEILEKVGYKDDEG+ANEL
Sbjct: 314 KETEVPSYVLMGIQQETVSPAETLPLTPLGEACSRMDLTAIHEILEKVGYKDDEGVANEL 373
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQMWT+QIQETLNSKKRGD AFRAKDF TAIECYT FIDGGTMVSPTVFARRCLCYL++
Sbjct: 374 SFQMWTNQIQETLNSKKRGDTAFRAKDFTTAIECYTQFIDGGTMVSPTVFARRCLCYLMN 433
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHR 356
+MPQEALGDAMQAQV+SPDW TAFYLQAAALF LGM+NDA+ETLKDGT LEAK++R
Sbjct: 434 EMPQEALGDAMQAQVVSPDWSTAFYLQAAALFSLGMDNDARETLKDGTTLEAKRNR 489
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478579|ref|XP_002280021.2| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/356 (89%), Positives = 334/356 (93%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPNETLSKHLFHWE QPMKWAMR+RVALYLAQAL+YCSSKGRALYHDLN YR+LFDQDGN
Sbjct: 134 MPNETLSKHLFHWEAQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGN 193
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV ESVVYSFGTLLLDLLSGKHIPPS
Sbjct: 194 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTAESVVYSFGTLLLDLLSGKHIPPS 253
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA+SLV SLTPLQ
Sbjct: 254 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNARSLVTSLTPLQ 313
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
KE EVPSY LMGI T S +T+ LTPLGEACSR+DLTAIHEILEKVGYKDDEG+ANEL
Sbjct: 314 KETEVPSYVLMGIQQETVSPAETLPLTPLGEACSRMDLTAIHEILEKVGYKDDEGVANEL 373
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQMWT+QIQETLNSKKRGD AFRAKDF TAIECYT FIDGGTMVSPTVFARRCLCYL++
Sbjct: 374 SFQMWTNQIQETLNSKKRGDTAFRAKDFTTAIECYTQFIDGGTMVSPTVFARRCLCYLMN 433
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHR 356
+MPQEALGDAMQAQV+SPDW TAFYLQAAALF LGM+NDA+ETLKDGT LE KK +
Sbjct: 434 EMPQEALGDAMQAQVVSPDWSTAFYLQAAALFSLGMDNDARETLKDGTTLEGKKQK 489
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224106345|ref|XP_002314137.1| predicted protein [Populus trichocarpa] gi|222850545|gb|EEE88092.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/355 (89%), Positives = 331/355 (93%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPNETLSKHLFHWENQPMKW MR+RVALYLAQALD CSSKGRALYHDLN YRILFDQD N
Sbjct: 121 MPNETLSKHLFHWENQPMKWTMRLRVALYLAQALDCCSSKGRALYHDLNAYRILFDQDAN 180
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESVVYSFGTLLLDLLSGKHIPPS
Sbjct: 181 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPS 240
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE RERPNAKSLV++L PLQ
Sbjct: 241 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEARERPNAKSLVSALAPLQ 300
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
KE EVPSY LMGIPHGT S KQT+ LTPLGEACSRLDLTAIH+ILEKVGYKDDEGIANEL
Sbjct: 301 KETEVPSYILMGIPHGTQSPKQTMLLTPLGEACSRLDLTAIHQILEKVGYKDDEGIANEL 360
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQMWTDQIQETLN KK GDAAFR KDF TAI+CYT FIDGGTMVSPTVFARR LCYL+S
Sbjct: 361 SFQMWTDQIQETLNCKKHGDAAFRTKDFNTAIDCYTQFIDGGTMVSPTVFARRSLCYLIS 420
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355
DMPQ+ALGD MQAQ +SP+WPTAFYLQAA LF LGM++DAQETLKDGT LEAK H
Sbjct: 421 DMPQQALGDTMQAQALSPEWPTAFYLQAATLFSLGMDSDAQETLKDGTYLEAKNH 475
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145334843|ref|NP_001078767.1| putative receptor protein kinase [Arabidopsis thaliana] gi|332009747|gb|AED97130.1| putative receptor protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/357 (87%), Positives = 338/357 (94%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MP ETLSKHLFHW++QPMKW+MR+RVALYLAQAL+YCSSKGRALYHDLN YRILFDQDGN
Sbjct: 1 MPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGN 60
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS
Sbjct: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIRGKNFLMLMDSCL+GHFSNDDGT+LVRLASRCLQYE RERPN KSLV+SL PLQ
Sbjct: 121 HALDLIRGKNFLMLMDSCLDGHFSNDDGTDLVRLASRCLQYEARERPNVKSLVSSLAPLQ 180
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
KE ++PS+ LMGIPHG AS K+T +LTPLG+ACSR DLTAIHEILEKVGYKDDEG+ANEL
Sbjct: 181 KETDIPSHVLMGIPHGAASPKETTSLTPLGDACSRHDLTAIHEILEKVGYKDDEGVANEL 240
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQ+WTDQIQETLNSKK+GDAAF+ KDF TA+ECYT FI+ GTMVSPTVFARRCLCYL+S
Sbjct: 241 SFQVWTDQIQETLNSKKQGDAAFKGKDFVTAVECYTQFIEDGTMVSPTVFARRCLCYLMS 300
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 357
+MPQEALGDAMQAQV+SP+WPTAFYLQAAALF LGM+ DA ETLKDGT+LEAKKH N
Sbjct: 301 NMPQEALGDAMQAQVVSPEWPTAFYLQAAALFSLGMDKDACETLKDGTSLEAKKHNN 357
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297796847|ref|XP_002866308.1| hypothetical protein ARALYDRAFT_496029 [Arabidopsis lyrata subsp. lyrata] gi|297312143|gb|EFH42567.1| hypothetical protein ARALYDRAFT_496029 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/357 (87%), Positives = 337/357 (94%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MP ETLSKHLFHW++QPMKW+MR+RVALYLAQAL+YCSSKGRALYHDLN YRILFDQDGN
Sbjct: 131 MPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGN 190
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS
Sbjct: 191 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 250
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIRGKNFLMLMDSCL+GHFSNDDGT+LVRLASRCLQYE RERPN KSLV+SL PLQ
Sbjct: 251 HALDLIRGKNFLMLMDSCLDGHFSNDDGTDLVRLASRCLQYEARERPNVKSLVSSLAPLQ 310
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
KE ++PSY LMGIPHG S K+T +LTPLG+ACSRLDLTAIHEILEKVGYKDDEG+ANEL
Sbjct: 311 KETDIPSYVLMGIPHGATSPKETTSLTPLGDACSRLDLTAIHEILEKVGYKDDEGVANEL 370
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQ+WTDQIQETLNSKK+GDAAF+ KDF TA+ECYT FI+ GTMVSPTVFARRCLCYL+S
Sbjct: 371 SFQVWTDQIQETLNSKKQGDAAFKGKDFVTAVECYTQFIEDGTMVSPTVFARRCLCYLMS 430
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 357
+MPQEALGDAMQAQV+SP+WPTAFYLQAAALF LGM+ DA ETLKDGT+LEAKK N
Sbjct: 431 NMPQEALGDAMQAQVVSPEWPTAFYLQAAALFSLGMDKDACETLKDGTSLEAKKQNN 487
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22327962|ref|NP_200709.2| putative receptor protein kinase [Arabidopsis thaliana] gi|9759232|dbj|BAB09644.1| protein kinase-like protein [Arabidopsis thaliana] gi|19715586|gb|AAL91617.1| AT5g59010/k19m22_210 [Arabidopsis thaliana] gi|111074228|gb|ABH04487.1| At5g59010 [Arabidopsis thaliana] gi|332009746|gb|AED97129.1| putative receptor protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/357 (87%), Positives = 338/357 (94%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MP ETLSKHLFHW++QPMKW+MR+RVALYLAQAL+YCSSKGRALYHDLN YRILFDQDGN
Sbjct: 131 MPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGN 190
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS
Sbjct: 191 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 250
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIRGKNFLMLMDSCL+GHFSNDDGT+LVRLASRCLQYE RERPN KSLV+SL PLQ
Sbjct: 251 HALDLIRGKNFLMLMDSCLDGHFSNDDGTDLVRLASRCLQYEARERPNVKSLVSSLAPLQ 310
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
KE ++PS+ LMGIPHG AS K+T +LTPLG+ACSR DLTAIHEILEKVGYKDDEG+ANEL
Sbjct: 311 KETDIPSHVLMGIPHGAASPKETTSLTPLGDACSRHDLTAIHEILEKVGYKDDEGVANEL 370
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQ+WTDQIQETLNSKK+GDAAF+ KDF TA+ECYT FI+ GTMVSPTVFARRCLCYL+S
Sbjct: 371 SFQVWTDQIQETLNSKKQGDAAFKGKDFVTAVECYTQFIEDGTMVSPTVFARRCLCYLMS 430
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 357
+MPQEALGDAMQAQV+SP+WPTAFYLQAAALF LGM+ DA ETLKDGT+LEAKKH N
Sbjct: 431 NMPQEALGDAMQAQVVSPEWPTAFYLQAAALFSLGMDKDACETLKDGTSLEAKKHNN 487
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449450772|ref|XP_004143136.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] gi|449496644|ref|XP_004160187.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/356 (87%), Positives = 331/356 (92%), Gaps = 1/356 (0%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPNETLS+HLFHWE QPMKWAMR+RVALYLAQAL+YCSSKGRALYHDLN YR+LFDQDGN
Sbjct: 130 MPNETLSRHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGN 189
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNL+FTPPEY+RTGR+ ESVVYSFGTLLLDLLSGKHIPPS
Sbjct: 190 PRLSCFGLMKNSRDGKSYSTNLSFTPPEYMRTGRISSESVVYSFGTLLLDLLSGKHIPPS 249
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE RERPN KSLV +LT LQ
Sbjct: 250 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYELRERPNVKSLVIALTALQ 309
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
KE EVPSY LMGI HG AS+KQ ++L+P GEACSR DLTAIHEILEK GYKDDEG+ANEL
Sbjct: 310 KETEVPSYVLMGISHGNASSKQ-MSLSPFGEACSRTDLTAIHEILEKAGYKDDEGVANEL 368
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQMWT QIQETLNSKKRGD+AFRAKDF TAI+CYT FIDGGTMVSPTVFARR LCYL+S
Sbjct: 369 SFQMWTSQIQETLNSKKRGDSAFRAKDFVTAIDCYTQFIDGGTMVSPTVFARRSLCYLMS 428
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHR 356
DMPQEALGDAMQAQV+SPDWPTA YLQAAALF LGM NDAQETL+DGT+LE KK R
Sbjct: 429 DMPQEALGDAMQAQVVSPDWPTALYLQAAALFILGMENDAQETLRDGTSLEFKKER 484
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225440554|ref|XP_002276280.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297740276|emb|CBI30458.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/357 (86%), Positives = 331/357 (92%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPNETL+KHLFHWE QPMKWAMR+RVALYLAQAL+YCSSKGRALYHDLN YR+LFDQDGN
Sbjct: 135 MPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGN 194
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESVVYSFGTLLLDLLSGKHIPPS
Sbjct: 195 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPS 254
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE RERPNAKSLV +L LQ
Sbjct: 255 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEARERPNAKSLVTALMSLQ 314
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
KE EVPSY LMGI H TAS + ++LTP GEAC R+DLTAIHEIL+K+GYKDDEGIANEL
Sbjct: 315 KETEVPSYILMGIAHDTASPAEPLSLTPFGEACLRMDLTAIHEILDKIGYKDDEGIANEL 374
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQMWT+Q+QETLNSKK GD AFRAKDF TAI+CYT FIDGGTMVSPTV+ARRCL YL++
Sbjct: 375 SFQMWTNQMQETLNSKKHGDTAFRAKDFTTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN 434
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 357
DMPQEALGDAMQAQV+SP+W TAFYLQAAALF LGM+ DAQETLKDGTNLE KK +N
Sbjct: 435 DMPQEALGDAMQAQVVSPEWATAFYLQAAALFSLGMDTDAQETLKDGTNLEVKKSKN 491
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 357 | ||||||
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 1.0 | 0.730 | 0.873 | 2.6e-173 | |
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.991 | 0.722 | 0.797 | 1.7e-155 | |
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.985 | 0.722 | 0.752 | 3.9e-147 | |
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.971 | 0.709 | 0.759 | 2.6e-143 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.983 | 0.720 | 0.740 | 2.6e-143 | |
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.991 | 0.691 | 0.684 | 3.3e-134 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.985 | 0.737 | 0.652 | 4.4e-123 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.994 | 0.725 | 0.633 | 1.2e-122 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.963 | 0.712 | 0.664 | 2.8e-121 | |
| TAIR|locus:2150074 | 499 | BSK10 "brassinosteroid-signali | 0.985 | 0.705 | 0.619 | 1.8e-119 |
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1684 (597.9 bits), Expect = 2.6e-173, P = 2.6e-173
Identities = 312/357 (87%), Positives = 338/357 (94%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MP ETLSKHLFHW++QPMKW+MR+RVALYLAQAL+YCSSKGRALYHDLN YRILFDQDGN
Sbjct: 131 MPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGN 190
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS
Sbjct: 191 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 250
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIRGKNFLMLMDSCL+GHFSNDDGT+LVRLASRCLQYE RERPN KSLV+SL PLQ
Sbjct: 251 HALDLIRGKNFLMLMDSCLDGHFSNDDGTDLVRLASRCLQYEARERPNVKSLVSSLAPLQ 310
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
KE ++PS+ LMGIPHG AS K+T +LTPLG+ACSR DLTAIHEILEKVGYKDDEG+ANEL
Sbjct: 311 KETDIPSHVLMGIPHGAASPKETTSLTPLGDACSRHDLTAIHEILEKVGYKDDEGVANEL 370
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQ+WTDQIQETLNSKK+GDAAF+ KDF TA+ECYT FI+ GTMVSPTVFARRCLCYL+S
Sbjct: 371 SFQVWTDQIQETLNSKKQGDAAFKGKDFVTAVECYTQFIEDGTMVSPTVFARRCLCYLMS 430
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 357
+MPQEALGDAMQAQV+SP+WPTAFYLQAAALF LGM+ DA ETLKDGT+LEAKKH N
Sbjct: 431 NMPQEALGDAMQAQVVSPEWPTAFYLQAAALFSLGMDKDACETLKDGTSLEAKKHNN 487
|
|
| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1516 (538.7 bits), Expect = 1.7e-155, P = 1.7e-155
Identities = 283/355 (79%), Positives = 318/355 (89%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MP+ETL+KHLFHWEN PMKWAMR+RVAL LAQAL+YCS+KGRALYHDLN YR+LFD+DGN
Sbjct: 132 MPHETLAKHLFHWENNPMKWAMRLRVALCLAQALEYCSNKGRALYHDLNAYRVLFDKDGN 191
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESVV+SFGT+LLDL+SGKHIPPS
Sbjct: 192 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVFSFGTVLLDLMSGKHIPPS 251
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIRGKN MLMDS LEGHFSN+DGTELVRLA+RCLQYE RERPN KSLV SL LQ
Sbjct: 252 HALDLIRGKNCAMLMDSALEGHFSNEDGTELVRLATRCLQYEARERPNVKSLVTSLVTLQ 311
Query: 181 KEAEVPSYTLMGIPHGTASTKQT-ITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANE 239
KE++V SY LMGIPH T + +++ ++LTP G+AC R+DLTAI EIL K+GYKDDEGIANE
Sbjct: 312 KESDVASYVLMGIPHETEAEEESPLSLTPFGDACLRVDLTAIQEILSKIGYKDDEGIANE 371
Query: 240 LSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL 299
LSFQMWT+Q+QE+LNSKK+GD AFR+KDF TA++CYT FIDGGTMVSPTV ARRCL YL+
Sbjct: 372 LSFQMWTNQMQESLNSKKQGDLAFRSKDFTTAVDCYTQFIDGGTMVSPTVHARRCLSYLM 431
Query: 300 SDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354
+D QEAL DA+QAQV+SPDWPTA YLQAA LF LGM DAQ+ LKDGT LEAKK
Sbjct: 432 NDNAQEALTDALQAQVVSPDWPTALYLQAACLFKLGMEADAQQALKDGTTLEAKK 486
|
|
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 268/356 (75%), Positives = 307/356 (86%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPNETL+KHLFHWE+QPMKWAMR+RVAL++AQAL+YC+ KGRALYHDLN YR+LFD D N
Sbjct: 135 MPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTGKGRALYHDLNAYRVLFDDDSN 194
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESV+YS+GTLLLDLLSGKHIPPS
Sbjct: 195 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSYGTLLLDLLSGKHIPPS 254
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIR +N ML+DSCLEG FS+DDGTEL+RLASRCLQYEPRERPN KSLV ++ PLQ
Sbjct: 255 HALDLIRDRNIQMLIDSCLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVTAMIPLQ 314
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
K+ E PS+ LMGIP S+ T L+PLGEAC R DLTAIHEILEK+ YKDDEG A EL
Sbjct: 315 KDLETPSHQLMGIP----SSASTTPLSPLGEACLRTDLTAIHEILEKLSYKDDEGAATEL 370
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQMWT+Q+Q++LN KK+GD AFR K+F AI+CY+ FI+GGTMVSPTV+ARR LCYL++
Sbjct: 371 SFQMWTNQMQDSLNFKKKGDVAFRHKEFANAIDCYSQFIEGGTMVSPTVYARRSLCYLMN 430
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHR 356
+MPQEAL DAMQAQVISP W A YLQA AL LG N+A LKDG+ LE+K++R
Sbjct: 431 EMPQEALNDAMQAQVISPAWHIASYLQAVALSALGQENEAHAALKDGSMLESKRNR 486
|
|
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1401 (498.2 bits), Expect = 2.6e-143, P = 2.6e-143
Identities = 269/354 (75%), Positives = 302/354 (85%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPNETL+KHLFHWE QPMKW MR+RV LYLAQAL+YC+SKGR LYHDLN YR+LFD++ N
Sbjct: 134 MPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECN 193
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGR+ PESV+YSFGTLLLDLLSGKHIPPS
Sbjct: 194 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPS 253
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIR +N L DSCL+G FS+ DGTELVRLASRCLQYE RERPN KSLV +LTPLQ
Sbjct: 254 HALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQ 313
Query: 181 KEAEVPSYTLMGIPH-GTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANE 239
KE EV S+ LMG+PH G+ S L+PLGEACSR DLTA+ EILEK+GYKDDEG+ NE
Sbjct: 314 KETEVLSHVLMGLPHSGSVSP-----LSPLGEACSRRDLTAMLEILEKLGYKDDEGVTNE 368
Query: 240 LSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL 299
LSF MWTDQ+QE+LNSKK+GD AFR KDF AIECYT FIDGG M+SPTV ARR LCYL+
Sbjct: 369 LSFHMWTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFIDGG-MISPTVCARRSLCYLM 427
Query: 300 SDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353
SDMP+EAL DA+QAQVISP W A YLQ+A+L LGM ++Q LK+G+NLEAK
Sbjct: 428 SDMPKEALDDAIQAQVISPVWHVASYLQSASLGILGMEKESQIALKEGSNLEAK 481
|
|
| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1401 (498.2 bits), Expect = 2.6e-143, P = 2.6e-143
Identities = 263/355 (74%), Positives = 303/355 (85%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPNETL+KHLFHWE+QPMKWAMR+RVAL++AQAL+YC+SKGRALYHDLN YR+LFD D N
Sbjct: 135 MPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDAN 194
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESV+YSFGTLLLDLLSGKHIPPS
Sbjct: 195 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 254
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIR +N MLMDS LEG FS+DDGTEL+RLASRCLQYEPRERPN KSLV+++ PLQ
Sbjct: 255 HALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQ 314
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
K+ E+ S+ L+G+P+ +T L+PLGEAC R DLTAIHEI+EK+GYKDDEG EL
Sbjct: 315 KDLEIASHQLLGVPNSATTT----ALSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTEL 370
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQMWTDQ+Q+TL KK+GD+AFR KDF AIECY+ FI+ GTM SPTV AR+ LCYL++
Sbjct: 371 SFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMN 430
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355
DMP+EAL +AMQAQVISP W A YLQA AL LG N+A LKDG LE+K++
Sbjct: 431 DMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAMLESKRN 485
|
|
| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1315 (468.0 bits), Expect = 3.3e-134, P = 3.3e-134
Identities = 245/358 (68%), Positives = 291/358 (81%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPN+TL+KHLFHWENQ ++WAMR+RV Y+A+ALDYCS++GR LYHDLN YR+LFD+DG+
Sbjct: 152 MPNDTLAKHLFHWENQTIEWAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGD 211
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMKNSRDGKSYSTNLA+TPPEYLR GRV PESV YSFGT+LLDLLSGKHIPPS
Sbjct: 212 PRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPS 271
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALD+IRGKN ++LMDS LEG FS ++ T +V LAS+CLQYEPRERPN K LVA+L PLQ
Sbjct: 272 HALDMIRGKNIILLMDSHLEGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQ 331
Query: 181 KEAEVPSYTLMGIP--HGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIAN 238
+++VPSY ++GI ST Q L+PLGEACSR+DLTAIH+IL Y+DDEG N
Sbjct: 332 TKSDVPSYVMLGIKKQEEAPSTPQR-PLSPLGEACSRMDLTAIHQILVMTHYRDDEG-TN 389
Query: 239 ELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYL 298
ELSFQ WT Q+++ L+++KRGD +FR KDF TAI+CY+ FID GTMVSPTVF RR LCYL
Sbjct: 390 ELSFQEWTQQMKDMLDARKRGDQSFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYL 449
Query: 299 LSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHR 356
L D P AL DAMQAQ + PDWPTAFY+Q+ AL L MN DA + L + LE K+ R
Sbjct: 450 LCDQPDAALRDAMQAQCVYPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKRQR 507
|
|
| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1210 (431.0 bits), Expect = 4.4e-123, P = 4.4e-123
Identities = 233/357 (65%), Positives = 285/357 (79%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPNETL+KHLFHWE +PMKW MR+RVAL+ A AL+YC+ G LYHDLNTYRILFD+ GN
Sbjct: 120 MPNETLAKHLFHWEKRPMKWEMRLRVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGN 179
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLSCFGLMK SR+GKSYSTNLAF PPEYLR G VIPESV +SFGTLLLDL+SG+HIPP+
Sbjct: 180 PRLSCFGLMKCSREGKSYSTNLAFAPPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPN 239
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDL RGKN+L+LMDS L+G FS++D TEL+ LASRCL+ EP ERP+ K L+++L+ L+
Sbjct: 240 HALDLFRGKNYLVLMDSALDGQFSDEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLE 299
Query: 181 KEAEV-PSYTLMGIP---HGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGY-KDDEG 235
K AE+ P+ IP + +TK+ + LTP GEAC R+DL+ +HE+LEK+GY +DD
Sbjct: 300 KRAELWPNVKEENIPTPSYTEPATKEPLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVV 359
Query: 236 IANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCL 295
+ NE SFQMWT Q+QE ++ KK GDAAFRAKDF TAIE YT F+ G +VSPTV ARRCL
Sbjct: 360 VTNEFSFQMWTGQMQENMDYKKHGDAAFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCL 419
Query: 296 CYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 352
CYL+SDM +EAL DAMQ QV SP++ A YLQAA L LGM +A+E L+ G++LEA
Sbjct: 420 CYLMSDMFREALSDAMQTQVASPEFSIALYLQAACLLKLGMEAEAKEALRHGSSLEA 476
|
|
| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1206 (429.6 bits), Expect = 1.2e-122, P = 1.2e-122
Identities = 226/357 (63%), Positives = 282/357 (78%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPN+TLSKHLFHWE QP+ W MRVR+A Y+A+ALDYC+ + R +YHDLN YRILFD++G+
Sbjct: 132 MPNDTLSKHLFHWEKQPLPWDMRVRIADYIAEALDYCNIENRKIYHDLNAYRILFDEEGD 191
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLS FGLMKNSRDGKSYSTNLA+TPPE+LRTGRVIPESV++S+GT+LLDLLSGKHIPPS
Sbjct: 192 PRLSTFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIFSYGTILLDLLSGKHIPPS 251
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALD+IRGKN L+LMDS LEG ++NDD T+LV LAS+CLQ E ++RP+ K L++++ PLQ
Sbjct: 252 HALDIIRGKNALLLMDSSLEGQYANDDATKLVDLASKCLQSEAKDRPDTKFLLSAVAPLQ 311
Query: 181 KEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANEL 240
K+ EV S+ LMG+P T T+ L+PLG+AC+++DL H+IL K GY+D+EG NEL
Sbjct: 312 KQEEVASHVLMGLPKNTVILP-TM-LSPLGKACAKMDLATFHDILLKTGYRDEEGAENEL 369
Query: 241 SFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS 300
SFQ WT Q+QE LN+KK GD AFR KDF +IE Y+ + + S TVFARR YL++
Sbjct: 370 SFQEWTQQVQEMLNTKKFGDIAFRDKDFKNSIEYYSKLVGMMPVPSATVFARRAFSYLMT 429
Query: 301 DMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 357
D + AL DAMQAQV P+WPTAFYLQA AL LGM DAQ+ L DG +AK+ +
Sbjct: 430 DQQELALRDAMQAQVCIPEWPTAFYLQALALSKLGMETDAQDMLNDGAAYDAKRQNS 486
|
|
| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
Identities = 236/355 (66%), Positives = 280/355 (78%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPNETL+KHLFHW+ +PMKWAMR+RVALY+++AL+YCS+ G LYHDLN YR+LFD++ N
Sbjct: 132 MPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHTLYHDLNAYRVLFDEECN 191
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
PRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGR+ ESV+YSFGTLLLDLL+GKHIPPS
Sbjct: 192 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAESVIYSFGTLLLDLLTGKHIPPS 251
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDLIR +N L DSCLEG FS+ DGTELVRL S CLQYE RERPN KSLV +L LQ
Sbjct: 252 HALDLIRDRNLQTLTDSCLEGQFSDSDGTELVRLTSCCLQYEARERPNIKSLVTALISLQ 311
Query: 181 KEAEVPSYTLMGIPH-GTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANE 239
K+ EV S+ LMG+P GT ++ + P EACS DLT++ EILEK+GYKDDE +
Sbjct: 312 KDTEVLSHVLMGLPQSGTFASPPS----PFAEACSGKDLTSMVEILEKIGYKDDE----D 363
Query: 240 LSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL 299
LSF MWT+Q+QE +NSKK+GD AFR KDF AIE YT F+D G M+S TV RR YL+
Sbjct: 364 LSF-MWTEQMQEAINSKKKGDIAFRRKDFSEAIEFYTQFLDLG-MISATVLVRRSQSYLM 421
Query: 300 SDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354
S+M +EAL DAM+AQ ISP W A YLQ+AAL LGM ++Q L +G+ LEA+K
Sbjct: 422 SNMAKEALDDAMKAQGISPVWYVALYLQSAALSVLGMEKESQIALTEGSILEARK 476
|
|
| TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1176 (419.0 bits), Expect = 1.8e-119, P = 1.8e-119
Identities = 223/360 (61%), Positives = 277/360 (76%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MPN TL+KHLFHWE +PMKW MR++VAL+ A+AL+YC+ KG LYHDLN YRI+FD+ G
Sbjct: 139 MPNGTLAKHLFHWEKRPMKWEMRLKVALHTARALEYCNDKGIDLYHDLNPYRIMFDKTGI 198
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120
P+LSCFGLMKNS +GK YSTNLAF PPEYLR G VI ESV +SFGTLLLDL+SG+HIPP+
Sbjct: 199 PKLSCFGLMKNSHEGKIYSTNLAFAPPEYLRLGTVIAESVTFSFGTLLLDLMSGRHIPPN 258
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180
HALDL RGKN+L+LMDS L+G FS++D TEL+ +ASRC + EP ERP+ K L A+L+ LQ
Sbjct: 259 HALDLFRGKNYLVLMDSALDGQFSDEDRTELIHVASRCFKTEPEERPSIKFLKATLSRLQ 318
Query: 181 KEAEV-P-------SYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKD 232
K A++ P S +P T +++ LTP G+ACSR DL++IHE+LEK+GY++
Sbjct: 319 KRAKLCPINVKRPMSPPSKNLPEKTKPATESLKLTPFGDACSRADLSSIHELLEKLGYEE 378
Query: 233 DEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFAR 292
D G+ NE SFQMWT ++QE ++ KK GDAAF AKDF TAIE YT F+ G VSPTV AR
Sbjct: 379 DNGVGNEFSFQMWTGEMQENMDYKKHGDAAFLAKDFDTAIEFYTEFMTGAPTVSPTVLAR 438
Query: 293 RCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 352
RCLCYL+++M EAL DAMQAQV SP+WP YLQAA LF L M +A+E L+ G+ LEA
Sbjct: 439 RCLCYLMTEMFSEALSDAMQAQVASPEWPIPLYLQAACLFKLEMEAEAKEALRHGSALEA 498
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_fgenesh4_pm.C_LG_I0650 | hypothetical protein (477 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 357 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 1e-16 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 6e-14 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 6e-11 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 4e-10 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 5e-10 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 4e-09 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 1e-08 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-08 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 6e-08 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 8e-08 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-07 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 9e-07 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 1e-06 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 2e-06 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 2e-06 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-06 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 8e-06 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 1e-05 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 2e-05 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 2e-05 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 3e-05 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 5e-05 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 5e-05 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 5e-05 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 5e-05 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 6e-05 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 7e-05 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 8e-05 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 8e-05 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 2e-04 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 2e-04 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 2e-04 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 2e-04 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 3e-04 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 3e-04 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 4e-04 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 6e-04 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 6e-04 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 7e-04 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 7e-04 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 7e-04 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 0.001 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 0.001 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 0.001 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 0.001 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 0.001 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 0.001 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 0.001 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 0.002 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 0.002 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 0.002 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 0.002 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 0.002 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 0.002 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 0.002 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 0.003 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 0.003 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 0.003 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 0.003 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 0.003 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 0.004 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 0.004 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 1e-16
Identities = 45/183 (24%), Positives = 66/183 (36%), Gaps = 47/183 (25%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQD- 58
+L L E + +R+ L + + L+Y S G + H DL IL D D
Sbjct: 73 CEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDSDN 129
Query: 59 GNPRLSCFGLMKNSRDGKSYST----NLAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLS 113
G +L+ FGL K KS A+ PE L E ++S G +L +L
Sbjct: 130 GKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-- 187
Query: 114 GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 173
DLIR + LQ +P +RP+AK ++
Sbjct: 188 ------PELKDLIR-----------------------------KMLQKDPEKRPSAKEIL 212
Query: 174 ASL 176
L
Sbjct: 213 EHL 215
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Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 6e-14
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 13/183 (7%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDG 59
L +L P+ ++AL + + L+Y S G + H DL IL D++G
Sbjct: 80 CEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLHSNG--IIHRDLKPENILLDENG 135
Query: 60 NPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESV-VYSFGTLLLDLLSG 114
+++ FGL K S T TP PE L G V V+S G +L +LL+G
Sbjct: 136 VVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTG 195
Query: 115 KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD--GTELVRLASRCLQYEPRERPNAKSL 172
K P S L + + ++ LE E L +CL +P +RP A+ +
Sbjct: 196 KP-PFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEI 254
Query: 173 VAS 175
+
Sbjct: 255 LQH 257
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Length = 260 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 6e-11
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 22/174 (12%)
Query: 14 ENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNS 72
+ + + + AL +A+ ++Y SK H DL L ++ ++S FGL ++
Sbjct: 96 RPKELSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRDL 153
Query: 73 RDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GK----HIPPSHA 122
D Y + PE L+ G+ +S V+SFG LL ++ + G+ + +
Sbjct: 154 YDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEV 213
Query: 123 LDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176
L+ ++ L +C EL +L +C +P +RP LV L
Sbjct: 214 LEYLKKGYRLPKPPNCPP---------ELYKLMLQCWAEDPEDRPTFSELVEIL 258
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Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 4e-10
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 22/170 (12%)
Query: 18 MKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGK 76
+ + + AL +A+ ++Y SK H DL L ++ ++S FGL ++ D
Sbjct: 99 LSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 156
Query: 77 SYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GK----HIPPSHALDLI 126
Y + PE L+ G+ +S V+SFG LL ++ + G+ + L+ +
Sbjct: 157 YYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYL 216
Query: 127 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176
+ L +C EL L +C +P +RP LV L
Sbjct: 217 KNGYRLPQPPNCPP---------ELYDLMLQCWAEDPEDRPTFSELVEIL 257
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Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 59.2 bits (143), Expect = 5e-10
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 24 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYSTNL 82
++ +L +A+ ++Y SK + ++ DL IL +DG ++S FGL + S + +
Sbjct: 103 LQFSLDVAEGMEYLESK-KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPV 161
Query: 83 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEG 141
+T PE L+ + +S V+S+G LL ++ S G+ P +L ++ C+E
Sbjct: 162 KWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK---------ECVEK 212
Query: 142 HFSNDDGTE----LVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182
+ + + L + C + EP++RP+ L L+KE
Sbjct: 213 GYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREK---LEKE 254
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 4e-09
Identities = 42/164 (25%), Positives = 63/164 (38%), Gaps = 25/164 (15%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDL---NTYRILFDQDGNPRLSCFGLMKNSRDGKSY 78
YL Q AL+Y SKG ++ DL N IL D+DG+ +L+ FGL + G+
Sbjct: 98 EARFYLRQILSALEYLHSKGI-VHRDLKPEN---ILLDEDGHVKLADFGLARQLDPGEKL 153
Query: 79 STN---LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK-----HIPPSHALDLIRGKN 130
+T + PE L ++S G +L +LL+GK I
Sbjct: 154 TTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPK 213
Query: 131 FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVA 174
E S E L + L +P +R A+ +
Sbjct: 214 PPFPPP---EWDISP----EAKDLIRKLLVKDPEKRLTAEEALQ 250
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Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 1e-08
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 21/156 (13%)
Query: 24 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-- 81
+++ A ++Y SK ++ DL L + ++S FG+ + DG ST
Sbjct: 97 IQMVENAAAGMEYLESK-HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM 155
Query: 82 ----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFL 132
+ +T PE L GR ES V+SFG LL + S +P + I L
Sbjct: 156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRL 215
Query: 133 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 168
+ C + + RL RC +Y+P +RP+
Sbjct: 216 PCPELCPD---------AVYRLMERCWEYDPGQRPS 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 4e-08
Identities = 43/159 (27%), Positives = 62/159 (38%), Gaps = 19/159 (11%)
Query: 25 RVALYLAQALDYC----SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST 80
R+ L AL C L+ DL I D + N +L FGL K S++
Sbjct: 109 RILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAK 168
Query: 81 NLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 136
TP PE L +S ++S G L+ +L + PP A +N L L
Sbjct: 169 TYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTA------RNQLQLAS 220
Query: 137 SCLEGHFSNDDG---TELVRLASRCLQYEPRERPNAKSL 172
EG F +EL + L +P +RP+ + L
Sbjct: 221 KIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEEL 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.5 bits (127), Expect = 6e-08
Identities = 46/195 (23%), Positives = 78/195 (40%), Gaps = 28/195 (14%)
Query: 1 MPNETLSKHL-------FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 53
M L +L E + + A+ +A+ ++Y +SK + ++ DL
Sbjct: 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVHRDLAARNC 136
Query: 54 LFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTL 107
L +D ++S FGL ++ D Y + + PE L+ G +S V+SFG L
Sbjct: 137 LVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVL 196
Query: 108 LLDLLS-GKH----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 162
L ++ + G + L+ +R L + C + EL L C Q +
Sbjct: 197 LWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPD---------ELYELMLSCWQLD 247
Query: 163 PRERPNAKSLVASLT 177
P +RP LV L
Sbjct: 248 PEDRPTFSELVERLE 262
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 8e-08
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 18/173 (10%)
Query: 24 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK--NSRDGKSYSTN 81
+ + + + +DY S+ R ++ DL IL + + ++S FGL K Y
Sbjct: 112 LLFSSQICKGMDYLGSQ-RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKE 170
Query: 82 LAFTP-----PEYLRTGRVIPESVVYSFGTLLLDLLS-GKH--IPPSHALDLIRGKNFLM 133
+P PE LRT + S V+SFG L +L + G PP+ L +I M
Sbjct: 171 PGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQM 230
Query: 134 LMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRERPNAKSLVASLTPL 179
++ LE E+ L C + EP++RP+ L+ + L
Sbjct: 231 IVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 52.1 bits (126), Expect = 1e-07
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 24/188 (12%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDG 59
MP L L + + +++AL +A+ ++Y SK H DL L ++
Sbjct: 83 MPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKGMEYLESKN--FVHRDLAARNCLVTENL 139
Query: 60 NPRLSCFGLMKN-SRDGKSYSTNLAFTP-----PEYLRTGRVIPESVVYSFGTLLLDLLS 113
++S FGL ++ D P PE L+ G+ +S V+SFG LL ++ +
Sbjct: 140 VVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFT 199
Query: 114 G-----KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 168
+ L+L+ L ++C + EL L +C Y+P +RP
Sbjct: 200 LGEQPYPGMSNEEVLELLEDGYRLPRPENCPD---------ELYELMLQCWAYDPEDRPT 250
Query: 169 AKSLVASL 176
LV L
Sbjct: 251 FSELVEDL 258
|
Length = 258 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 9e-07
Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 20/152 (13%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 81
R Y A+ AL+Y S G +Y DL IL D DG+ +L+ FGL K S +
Sbjct: 94 RARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT 152
Query: 82 LAFTP----PEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 136
TP PE L G+ ++V +S G LL ++L+GK PP ++ + +
Sbjct: 153 FCGTPEYLAPEVLL-GKGYGKAVDWWSLGVLLYEMLTGK--PP------FYAEDRKEIYE 203
Query: 137 SCLEG--HFSNDDGTELVRLASRCLQYEPRER 166
L+ F E L S LQ +P +R
Sbjct: 204 KILKDPLRFPEFLSPEARDLISGLLQKDPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 48.6 bits (117), Expect = 1e-06
Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 38/161 (23%)
Query: 30 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP--- 86
L AL Y S+ + L+ D+ I +G +L FG+ K S+ +
Sbjct: 112 LCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGI------SKVLSSTVDLAKTVV 164
Query: 87 --PEYLRTGRVIPE----------SVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLML 134
P YL PE S ++S G +L +L + KH P G+N L L
Sbjct: 165 GTPYYLS-----PELCQNKPYNYKSDIWSLGCVLYELCTLKH--P------FEGENLLEL 211
Query: 135 MDSCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSL 172
L+G + + +EL L S LQ +P ERP+ +
Sbjct: 212 ALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQI 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 2e-06
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQEALGDAMQ 312
G+ ++ D+ A+E Y ++ + P + Y +EAL D +
Sbjct: 4 LNLGNLYYKLGDYDEALEYYEKALE----LDPDNADAYYNLAAAYYKLGKYEEALEDYEK 59
Query: 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353
A + PD A+Y A + LG +A E + L+
Sbjct: 60 ALELDPDNAKAYYNLGLAYYKLGKYEEALEAYEKALELDPN 100
|
Length = 100 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 2e-06
Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 20/170 (11%)
Query: 18 MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS 77
+K V+ AL A + Y SK ++ DL L ++ ++S FG+ + DG
Sbjct: 90 LKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY 148
Query: 78 YSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIR 127
S+ L +T PE L GR ES V+S+G LL + S P A + +
Sbjct: 149 SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE 208
Query: 128 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177
+ C + ++ ++ RC Y+P RP L L
Sbjct: 209 KGYRMSCPQKCPD---------DVYKVMQRCWDYKPENRPKFSELQKELA 249
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 48.6 bits (114), Expect = 3e-06
Identities = 55/287 (19%), Positives = 95/287 (33%), Gaps = 29/287 (10%)
Query: 1 MPNETLSKHL-FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG 59
+ +L L P+ + + + + AL+Y SKG ++ D+ IL D+DG
Sbjct: 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDG 138
Query: 60 NPRLSC-FGLMKNSRDGKSYSTN----------LAFTPPEYLR---TGRVIPESVVYSFG 105
FGL K D S S+ + PE L S ++S G
Sbjct: 139 RVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLG 198
Query: 106 TLLLDLLSGKH--------IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157
L +LL+G S L +I + + S L L +
Sbjct: 199 ITLYELLTGLPPFEGEKNSSATSQTLKIIL-ELPTPSLASPLSPSNPELISKAASDLLKK 257
Query: 158 CLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLD 217
L +P+ R ++ S ++ L ++ L + S ++L P EA
Sbjct: 258 LLAKDPKNRLSSSSDLSH--DLLAHLKLKESDLSDLLKPDDSAPLRLSLPPSLEALIS-- 313
Query: 218 LTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFR 264
I DD + EL+ + + + ++ R
Sbjct: 314 SLNSLAISGSDLKLDDSNFSKELAPNGVSSSPHNSSSLLLSTASSKR 360
|
Length = 384 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 8e-06
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 29/180 (16%)
Query: 18 MKWAMRVRVALYLAQALDY--CSSKGRALYHDLNTYRILFDQDGNPRLSCFGL-----MK 70
+ W R ++A+ +A+AL + C + +L+ +I+ D P L L
Sbjct: 777 LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL-RLSLPGLLCTD 835
Query: 71 NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK- 129
S A+ PE T + +S +Y FG +L++LL+GK P+ A + G
Sbjct: 836 TKCFISS-----AYVAPETRETKDITEKSDIYGFGLILIELLTGKS--PADAEFGVHGSI 888
Query: 130 -----------NFLMLMDSCLEGHFS--NDDGTELVRLASRCLQYEPRERPNAKSLVASL 176
+ M +D + G S ++ E++ LA C +P RP A ++ +L
Sbjct: 889 VEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948
|
Length = 968 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 1e-05
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 17 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 76
P++ + + + LDY S+ R ++ D+ +L + G+ +L+ FG+ D +
Sbjct: 97 PLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155
Query: 77 SYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL 132
TP PE ++ ++ ++S G ++L G+ PP+ L +R FL
Sbjct: 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMRVL-FL 212
Query: 133 MLMDS--CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 173
+ +S LEG +S CL +PR RP AK L+
Sbjct: 213 IPKNSPPTLEGQYSK----PFKEFVEACLNKDPRFRPTAKELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 19/150 (12%)
Query: 32 QALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL---MKNSRDGKSYSTNLAFTPPE 88
+ L+Y S G ++ D+ IL DG +L FGL + +++ + + PE
Sbjct: 109 KGLEYLHSNGI-IHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPE 167
Query: 89 YLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH------ALDLIRGKNFLMLMDSCLEGH 142
+ ++ ++S G ++L GK PP AL I L
Sbjct: 168 VINGKPYDYKADIWSLGITAIELAEGK--PPYSELPPMKALFKIATNGPPGL----RNPE 221
Query: 143 FSNDDGTELVRLASRCLQYEPRERPNAKSL 172
+D E +CLQ P +RP A+ L
Sbjct: 222 KWSD---EFKDFLKKCLQKNPEKRPTAEQL 248
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 2e-05
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 32/187 (17%)
Query: 2 PNETLSKHLFHWENQPMK----WAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 57
N L K L +P+ W +++ L L + SK + L+ D+ + + D
Sbjct: 82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILL----GLAHLHSK-KILHRDIKSLNLFLDA 136
Query: 58 DGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLS 113
N ++ G+ K D +++ + TP PE +S V++ G +L + +
Sbjct: 137 YDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCT 196
Query: 114 GKHIPPSHA-------LDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 166
GKH P A L +IRG + +S L +L +CL + R+R
Sbjct: 197 GKH--PFDANNQGALILKIIRGVF------PPVSQMYSQQ----LAQLIDQCLTKDYRQR 244
Query: 167 PNAKSLV 173
P+ L+
Sbjct: 245 PDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 3e-05
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 81
R Y A+ L + SKG +Y DL IL D DG+ +++ FG+ K + G + +
Sbjct: 97 RATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCT 155
Query: 82 LAFTP----PEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPSHALD 124
TP PE L G+ SV +SFG LL ++L G+ P H D
Sbjct: 156 FCGTPDYIAPEIL-LGQKYNTSVDWWSFGVLLYEMLIGQ--SPFHGHD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 5e-05
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 23/159 (14%)
Query: 31 AQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-------LA 83
A ++Y SK ++ DL L ++ ++S FG M +G Y+ + +
Sbjct: 103 AAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFG-MSREEEGGIYTVSDGLKQIPIK 160
Query: 84 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSC 138
+T PE L GR ES V+S+G LL + S P + I + C
Sbjct: 161 WTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLC 220
Query: 139 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177
E E+ RL +C Y+P RP+ + L
Sbjct: 221 PE---------EIYRLMLQCWAYDPENRPSFSEIYNELQ 250
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 5e-05
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 86 PPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP---PSH--ALDLIRGKNFLMLMDSCLE 140
PE L+ G +S V+SFG +L ++ + P S+ L + L L ++C +
Sbjct: 189 APESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPD 248
Query: 141 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 178
+L+ L C QY P+ RP +V+SL
Sbjct: 249 ---------KLLELMRMCWQYNPKMRPTFLEIVSSLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 5e-05
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 26 VALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYS- 79
V YLA+ ALD+ S G +Y DL IL D++G+ +L+ FGL K S D K+YS
Sbjct: 100 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158
Query: 80 -TNLAFTPPEYL-RTGRVIPESVVYSFGTLLLDLLSG 114
+ + PE + R G +SFG L+ ++L+G
Sbjct: 159 CGTVEYMAPEVVNRRGHTQSAD-WWSFGVLMFEMLTG 194
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 27 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTNLAFT 85
AL + + ++Y K ++ DL +L +D ++S FGL K + G S + +T
Sbjct: 108 ALDVCEGMEYLEEK-NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWT 166
Query: 86 PPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHAL-DLIRG--KNFLMLMDSCLEG 141
PE LR + +S V+SFG LL ++ S +P P L D++ K + M EG
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM---EAPEG 223
Query: 142 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177
E+ ++ C + +P +RP K L L
Sbjct: 224 C-----PPEVYKVMKDCWELDPAKRPTFKQLREQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 6e-05
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 19/159 (11%)
Query: 26 VALYLAQ---ALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMK--NSRDGKSYS 79
+ Y Q L Y S G H D+ IL D DG +L+ FG K + +
Sbjct: 103 IRKYTRQILEGLAYLHSNGIV--HRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT 160
Query: 80 TNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM 135
++ TP PE +R + ++S G ++++ +GK P S + + +
Sbjct: 161 GSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKP-PWSELGNPMA----ALYK 215
Query: 136 DSCLEGH--FSNDDGTELVRLASRCLQYEPRERPNAKSL 172
E +CL+ +P++RP A L
Sbjct: 216 IGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADEL 254
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 7e-05
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 18/152 (11%)
Query: 30 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP--- 86
+ + LDY S+ + ++ D+ +L + G +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 87 -PEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPPSHALDLIRGKNFLMLMDSCLEG 141
PE ++ ++ ++S G ++L G+ + P L LI N LEG
Sbjct: 169 APEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN-----PPTLEG 223
Query: 142 HFSNDDGTELVRLASRCLQYEPRERPNAKSLV 173
++S L CL EP RP AK L+
Sbjct: 224 NYSK----PLKEFVEACLNKEPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 8e-05
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 27 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY-------S 79
A + + + Y S+ ++ DL +L D D ++ FGL K +G Y
Sbjct: 113 AQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 171
Query: 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKHIPPSHALDLIRGKNFLM--- 133
+ + + E L+ + S V+SFG L +LL+ K PP ++I K M
Sbjct: 172 SPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVV 231
Query: 134 ----LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176
L++ + + E+ L C + E + RP +SL+ L
Sbjct: 232 RLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPIL 278
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 8e-05
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYL-LSDMPQEALGDAMQAQ 314
K G+A F+ D+ AIE Y ++ + + L YL L +EAL D +A
Sbjct: 7 KNLGNALFKLGDYDEAIEAYEKALELDPD-NAEAYYNLALAYLKLGKDYEEALEDLEKAL 65
Query: 315 VISP 318
+ P
Sbjct: 66 ELDP 69
|
Length = 69 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 2e-04
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 16/119 (13%)
Query: 6 LSKHLFHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPR 62
L HL+ E+ V +Y+A+ ALD+ G +Y D+ IL D +G+
Sbjct: 92 LFTHLYQREHFTES-----EVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVV 145
Query: 63 LSCFGLMK-----NSRDGKSYSTNLAFTPPEYLRTGRVIPESVV--YSFGTLLLDLLSG 114
L+ FGL K S+ + + PE +R G + V +S G L +LL+G
Sbjct: 146 LTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 18/154 (11%)
Query: 32 QALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG----LMKNSRDGKSYSTNLAFTP- 86
+ L+Y S G+ ++ D+ IL +DG+ +++ FG L + TP
Sbjct: 113 KGLEYLHSNGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPC 171
Query: 87 ---PEYLRTGRVIPESV-VYSFGTLLLDLLSGK----HIPPSHALDLIRGKNFLMLMDSC 138
PE + ++SFG ++L +G PP L L + L
Sbjct: 172 WMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGA 231
Query: 139 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
+S ++ S CLQ +P +RP A+ L
Sbjct: 232 DYKKYSK----SFRKMISLCLQKDPSKRPTAEEL 261
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 2e-04
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 81
R Y AQ L++ + R +Y DL +L D DGN R+S GL +DG+S +
Sbjct: 98 RACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156
Query: 82 LAFTP----PEYLRTGRVIPESVVY-SFGTLLLDLLSGK 115
A TP PE L+ G SV Y + G L ++++ +
Sbjct: 157 YAGTPGFMAPELLQ-GEEYDFSVDYFALGVTLYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 2e-04
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 22 MRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 81
M V+ +A ++Y SSK ++ DL + +++ N ++ FGL K +G Y
Sbjct: 113 MLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQG 171
Query: 82 LAFTPP------EYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKN 130
P E L +S V+SFG + ++ + P S D +R N
Sbjct: 172 RIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN 231
Query: 131 FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176
L CL+G +S L S C P++RP+ ++L L
Sbjct: 232 RLKQPPDCLDGLYS---------LMSSCWLLNPKDRPSFETLRCEL 268
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 3e-04
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 81
R Y A+ L + SKG +Y DL ++ D+DG+ +++ FG+ K + G + ++
Sbjct: 97 RATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST 155
Query: 82 LAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD 124
TP PE L+ + +SFG LL ++L G+ P H D
Sbjct: 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQ--SPFHGDD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 3e-04
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 11/102 (10%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDGKSYST 80
R Y A+ AL + KG +Y DL +L D +G+ +L+ FG+ K +GK+ ST
Sbjct: 97 RARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST 155
Query: 81 NLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP 118
TP PE L+ P ++ G LL ++L G H P
Sbjct: 156 -FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 4e-04
Identities = 36/184 (19%), Positives = 77/184 (41%), Gaps = 21/184 (11%)
Query: 7 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66
S +L + + + + + A +++ + Y + + ++ DL +L + ++S F
Sbjct: 113 SSYLDNPDERALTMGDLISFAWQISRGMQYLAEM-KLVHRDLAARNVLVAEGRKMKISDF 171
Query: 67 GLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKH--- 116
GL ++ + SY + + E L +S V+SFG LL ++++ G +
Sbjct: 172 GLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 231
Query: 117 -IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175
I P +L++ + ++C E E+ L C + EP +RP +
Sbjct: 232 GIAPERLFNLLKTGYRMERPENCSE---------EMYNLMLTCWKQEPDKRPTFADISKE 282
Query: 176 LTPL 179
L +
Sbjct: 283 LEKM 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 6e-04
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 81
R Y A+ L + KG +Y DL +L D+DG+ +++ FG+ K + +G+ ++
Sbjct: 97 RARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST 155
Query: 82 LAFTP----PEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPSHALD 124
TP PE L+ G+ ESV +SFG LL ++L G+ P H D
Sbjct: 156 FCGTPDYIAPEILK-GQKYNESVDWWSFGVLLYEMLIGQ--SPFHGED 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 40.9 bits (95), Expect = 6e-04
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 32 QALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----P 87
QALD+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 126 QALDFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 184
Query: 88 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 147
E + P+ ++S G + ++++ G+ PP + +R L L+ + N +
Sbjct: 185 EVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 239
Query: 148 GTELV--RLASRCLQYEPRERPNAKSL-----------VASLTPL 179
V +RCL+ + R +AK L ++SLTPL
Sbjct: 240 RLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLTPL 284
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 7e-04
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 26 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFT 85
V L + +AL ++G ++ D+ + IL DG +LS FG +L T
Sbjct: 121 VCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT 179
Query: 86 P----PEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPPSHALDLIR 127
P PE + PE ++S G ++++++ G+ + PP A+ +IR
Sbjct: 180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 229
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 7e-04
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 44/216 (20%)
Query: 30 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDG---KSYSTNLAFT 85
+ ALDY S+ +Y DL ++ D+DG+ +++ FGL K +DG K++ +
Sbjct: 104 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 163
Query: 86 PPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-LMLMDSCLEG 141
PE L GR + + G ++ +++ G+ P + D K F L+LM+ E
Sbjct: 164 APEVLEDNDYGRAVD---WWGLGVVMYEMMCGRL--PFYNQD--HEKLFELILME---EI 213
Query: 142 HFSNDDGTELVRLASRCLQYEPRER-----PNAKSLV-----ASLT--PLQKEAEVPSYT 189
F E L S L+ +P++R +AK ++ A + + ++ VP +
Sbjct: 214 RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFK 273
Query: 190 LMGIPHGTASTK----------QTITLTPLGEACSR 215
P T+ T Q IT+TP + S
Sbjct: 274 ----PQVTSETDTRYFDEEFTAQMITITPPDQDDSM 305
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 7e-04
Identities = 46/176 (26%), Positives = 68/176 (38%), Gaps = 40/176 (22%)
Query: 30 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK--NSRDGKSYSTNLAFT-- 85
L + L Y S G L+ D+ IL + DG +L+ FGL + R+ Y TN T
Sbjct: 109 LLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY-TNRVITLW 166
Query: 86 --PPEYL----RTGRVIPESVVYSFGTLLLDLLSGKHIPP----SHALDLI--------- 126
PPE L R G PE ++S G +L +L GK I L+ I
Sbjct: 167 YRPPELLLGATRYG---PEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTD 223
Query: 127 ---RGKNFLMLMD---------SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAK 170
G + L + L F + + L + L +P++R +A
Sbjct: 224 ENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISAD 279
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.001
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 24 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST-NL 82
++ +L + +A++Y + ++ DL +L +D ++S FGL K + + +
Sbjct: 105 LKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 163
Query: 83 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP 118
+T PE LR + +S V+SFG LL ++ S +P
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.001
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 25/160 (15%)
Query: 26 VALYLAQALDYCSSKGRALYH-------DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY 78
VA+Y+ Q L +G A H D+ IL +DG +L+ FG+ D
Sbjct: 101 VAVYVYQVL-----QGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155
Query: 79 STNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLML 134
++ TP PE + S ++S G +++LL+G PP + L+ + F ++
Sbjct: 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGN--PPYYDLNPMAAL-FRIV 212
Query: 135 MDSC--LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
D L S EL +C Q +P RP AK L
Sbjct: 213 QDDHPPLPEGISP----ELKDFLMQCFQKDPNLRPTAKQL 248
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.001
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 39/201 (19%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
+P+ +L ++L +N+ + +++ A+ + + +DY S+ + ++ DL +L + +
Sbjct: 90 LPSGSLKEYLPRNKNK-INLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQ 147
Query: 61 PRLSCFGLMKNSRDGKSYST-------NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 113
++ FGL K K Y T + + PE L + S V+SFG L +LL+
Sbjct: 148 VKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT 207
Query: 114 G------------KHIPPSHA----LDLIR----GKNFLMLMDSCLEGHFSNDDGTELVR 153
K I P+H L+R GK L +C E E+ +
Sbjct: 208 YCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKR-LPRPPNCPE---------EVYQ 257
Query: 154 LASRCLQYEPRERPNAKSLVA 174
L +C +++P +R ++L+
Sbjct: 258 LMRKCWEFQPSKRTTFQNLIE 278
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.001
Identities = 52/228 (22%), Positives = 86/228 (37%), Gaps = 62/228 (27%)
Query: 15 NQPMKWAMRV------RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 68
+Q +K A R+ ++++ + + L Y K + ++ D+ IL + G +L FG+
Sbjct: 87 DQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 146
Query: 69 -------MKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKH-IPP 119
M NS G +SY + PE L+ +S ++S G L+++ G++ IPP
Sbjct: 147 SGQLIDSMANSFVGTRSYMS------PERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200
Query: 120 ---------------------------SHALDLIRGKNFLMLMDSCLE--------GHFS 144
H D R L+D + G FS
Sbjct: 201 PDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFS 260
Query: 145 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMG 192
E +CL+ P+ER + K L P K AE+ G
Sbjct: 261 ----DEFQDFVDKCLKKNPKERADLKELTKH--PFIKRAELEEVDFAG 302
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.001
Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 13/158 (8%)
Query: 27 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN----- 81
A+ +A + Y SK R ++ DL IL D ++ FGLM+ + +
Sbjct: 103 AVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLK 161
Query: 82 --LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 139
A+ PE LRT S V+ FG L ++ + P + + G L +D
Sbjct: 162 VPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAG----LSGSQILKKIDKEG 217
Query: 140 EG-HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176
E ++ + +C + P +RP +L L
Sbjct: 218 ERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFL 255
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.001
Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 40/186 (21%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST- 80
++ LY +Q ++Y SK R ++ DL T IL + + ++ FGL K K Y
Sbjct: 109 KLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKV 167
Query: 81 ------NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI---PPS----------- 120
+ + PE L + S V+SFG +L +L + PP+
Sbjct: 168 REPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQ 227
Query: 121 ------HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVA 174
H ++L++ L C E+ + C +P +RP+ L
Sbjct: 228 GQMIVYHLIELLKNNGRLPAPPGC---------PAEIYAIMKECWNNDPSQRPSFSELAL 278
Query: 175 SLTPLQ 180
+ ++
Sbjct: 279 QVEAIR 284
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.001
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 28/119 (23%)
Query: 33 ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRT 92
AL+Y SK +Y DL IL D++G+ +L+ FG K RD ++++ L T PEYL
Sbjct: 113 ALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-RTWT--LCGT-PEYL-- 165
Query: 93 GRVIPESVV----------YSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 141
PE + ++ G L+ ++L G PP N + + L G
Sbjct: 166 ---APEVIQSKGHNKAVDWWALGILIYEMLVG--YPP------FFDDNPFGIYEKILAG 213
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 27 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 86
A +A AL Y S +Y DL IL D G+ L+ FGL K + ++ TP
Sbjct: 102 AAEIASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP 160
Query: 87 ----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD 124
PE LR + G +L ++L G +PP ++ D
Sbjct: 161 EYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRD 200
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.002
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 29/159 (18%)
Query: 30 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG---LMKNSRDGK-SYSTNLAFT 85
+ + LDY +K ++ D+ +L + G +++ FG +++N+ D ++ + +
Sbjct: 108 ILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYM 167
Query: 86 PPEYLRTGRVIPESVVY-----SFGTLLLDLLSGKH-IPPSHALDLIRGKNFLM--LMDS 137
PE R+ ES Y S G LL+ GK P LM + D
Sbjct: 168 SPE-----RIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFE----LMQAICDG 218
Query: 138 CL----EGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
FS + + + S CLQ +P++RP+A L
Sbjct: 219 PPPSLPAEEFS-PEFRDFI---SACLQKDPKKRPSAAEL 253
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 39.3 bits (91), Expect = 0.002
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 23/170 (13%)
Query: 32 QALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----P 87
QAL++ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 88 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 147
E + P+ ++S G + ++++ G+ PP + +R L L+ + N +
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 240
Query: 148 GTELV--RLASRCLQYEPRERPNAKSL-----------VASLTPLQKEAE 184
+ +RCL + +R +AK L ++SLTPL A+
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAK 290
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 39.3 bits (91), Expect = 0.002
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 15 NQPMKWAMRV------RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 68
+Q +K A R+ +V++ + + L Y K + ++ D+ IL + G +L FG+
Sbjct: 91 DQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGV 150
Query: 69 MKNSRD--GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKH-IPPSHALDL 125
D S+ ++ PE L+ +S ++S G L++L G++ IPP A +L
Sbjct: 151 SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL 210
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.002
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 26 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFT 85
V L + +AL + ++G ++ D+ + IL DG +LS FG +L T
Sbjct: 120 VCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGT 178
Query: 86 P----PEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPPSHALDLIRGKNFLMLMDS 137
P PE + E ++S G ++++++ G+ + PP A+ IR D+
Sbjct: 179 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIR--------DN 230
Query: 138 CLEGHFSNDDGT--ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPS 187
L N L R L +P +R A L+ P +A PS
Sbjct: 231 -LPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH--PFLAKAGPPS 279
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.002
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
Query: 25 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSYSTNL 82
+V++ + + L Y K + ++ D+ IL + G +L FG+ D S+
Sbjct: 107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 83 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKH-IPPSHALDLIRGKNFLMLMDSCLEG 141
++ PE L+ +S ++S G L+++ G++ IPP A K ++ +EG
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA------KELELMFGCPVEG 220
Query: 142 HFSNDDGTELVRLASRCL-QYEPRERP 167
+ + + R R L Y P RP
Sbjct: 221 DPAESETSPRPRPPGRPLSSYGPDSRP 247
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.002
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 34/167 (20%)
Query: 26 VALYLAQALDYCSSKGRALYHDLNT-YR------ILFDQDGNPRLSCFGLMKNS---RDG 75
+ LY Q L G HD NT +R IL D +G +L+ FG+ K
Sbjct: 104 IRLYTRQILL-----GLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA 158
Query: 76 KSYSTNLAFTPPEYL-RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-------R 127
KS+ + + PE + + G + ++S G +L++ +GK PP L+ + R
Sbjct: 159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK--PPWSQLEGVAAVFKIGR 216
Query: 128 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVA 174
K + D H S D+ + + CLQ +P RP A L+
Sbjct: 217 SKELPPIPD-----HLS-DEAKDFILK---CLQRDPSLRPTAAELLE 254
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.003
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 23/168 (13%)
Query: 14 ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN-PRLSCFGLMKNS 72
E+Q + W V+++L L D + L+ D+ + I ++G +L FG+ +
Sbjct: 100 EDQILSWF--VQISLGLKHIHDR-----KILHRDIKSQNIFLSKNGMVAKLGDFGIARQL 152
Query: 73 RDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG 128
D + TP PE + ++ ++S G +L +L + KH P G
Sbjct: 153 NDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKH--P------FEG 204
Query: 129 KNFLMLMDSCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLV 173
N L+ +G+F S + +L L S+ + PR+RP+ S++
Sbjct: 205 NNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSIL 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.003
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 24 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-- 81
+ +A+ +A ++Y SS ++ DL L + ++S FGL SRD YS +
Sbjct: 127 LHIAIQIAAGMEYLSSH-HFVHRDLAARNCLVGEGLTVKISDFGL---SRDI--YSADYY 180
Query: 82 ---------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 113
+ + PPE + G+ ES ++SFG +L ++ S
Sbjct: 181 RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.003
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 27/185 (14%)
Query: 24 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY--STN 81
V A +A+ ++Y +S+ + ++ DL +L +D +++ FGL ++ + Y +TN
Sbjct: 137 VSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTN 195
Query: 82 ----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG-----KHIPPSHALDLIRGKNFL 132
+ + PE L +S V+SFG LL ++ + IP L++
Sbjct: 196 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK----- 250
Query: 133 MLMDSCLEGHFSNDDGT---ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYT 189
EGH + EL + C P +RP K LV L + Y
Sbjct: 251 -------EGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTSTDEYL 303
Query: 190 LMGIP 194
+ +P
Sbjct: 304 DLSVP 308
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.003
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 19/163 (11%)
Query: 26 VALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL 82
V YL Q A+ Y G L+ D+ T I + G +L FG+ K S + +
Sbjct: 103 VLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETV 161
Query: 83 AFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC 138
TP PE + + +S +++ G +L +LL+ K N L L+
Sbjct: 162 VGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRT--------FDATNPLNLVVKI 213
Query: 139 LEGHFSNDDG---TELVRLASRCLQYEPRERPNAKSLVASLTP 178
++G+++ +EL+ L LQ +P +RP A ++
Sbjct: 214 VQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 38.5 bits (89), Expect = 0.003
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 32 QALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----P 87
+ LDY S+ + ++ D+ +L + G+ +L+ FG+ D + TP P
Sbjct: 112 KGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170
Query: 88 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 147
E ++ ++ ++S G ++L G+ PP+ + +R L L+ + +
Sbjct: 171 EVIQQSAYDSKADIWSLGITAIELAKGE--PPNSDMHPMR---VLFLIPKNNPPTLTGEF 225
Query: 148 GTELVRLASRCLQYEPRERPNAKSLV 173
CL +P RP AK L+
Sbjct: 226 SKPFKEFIDACLNKDPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 38.3 bits (89), Expect = 0.004
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 81
R Y A+ AL + G +Y DL IL D +G+ +L+ FG+ K +T
Sbjct: 97 RSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTT 155
Query: 82 LAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHA 122
TP PE L+ P ++ G L+ ++++G+ PP A
Sbjct: 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQ--PPFEA 198
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 38.3 bits (89), Expect = 0.004
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 34/177 (19%)
Query: 17 PMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDG 75
+ W ++ VA LA AL + KG L H ++ +L ++ + + +K S G
Sbjct: 98 NISW--KLEVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153
Query: 76 KSYST--------NLAFTPPEYLRTGRVIP-ESVVYSFGTLLLDLLSGKHIPPSHALDLI 126
S + + + PPE + + + + +SFGT L ++ SG P
Sbjct: 154 ISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKP-------- 205
Query: 127 RGKNFLMLMDSCLEGHFSND-------DGTELVRLASRCLQYEPRERPNAKSLVASL 176
L +DS + F D TEL L ++C+ YEP RP+ ++++ L
Sbjct: 206 -----LSALDSQKKLQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 38.3 bits (89), Expect = 0.004
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 42 RALYHDLNTYRILFDQDGNPRLSCFGL---MKNSRDGKSYSTNLAFTPPEYLRTGRVIPE 98
R +Y DL +L D GN R+S GL +K + K + + PE L+
Sbjct: 115 RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFS 174
Query: 99 SVVYSFGTLLLDLLSGK 115
++ G L ++++G+
Sbjct: 175 VDWFALGCTLYEMIAGR 191
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 357 | |||
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.98 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.98 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.98 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.98 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.97 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.97 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.97 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.97 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.97 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.97 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.97 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.97 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.97 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.97 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.97 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.97 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.97 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.97 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.97 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.97 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.97 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.97 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.97 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.97 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.97 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.97 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.97 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.97 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.97 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.97 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.97 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.97 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.97 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.97 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.97 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.97 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.97 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.97 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.97 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.97 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.97 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.97 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.97 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.97 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.97 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.97 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.97 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.97 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.97 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.97 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.97 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.97 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.97 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.97 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.97 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.97 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.97 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.97 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.97 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.97 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.97 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.97 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.97 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.97 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.97 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.97 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.97 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.97 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.97 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.97 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.97 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.97 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.97 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.97 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.97 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.97 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.97 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.97 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.97 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.97 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.97 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.97 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.97 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.97 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.96 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.96 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.96 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.96 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.96 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.96 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.96 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.96 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.96 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.96 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.96 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.96 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.96 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.96 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.96 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.96 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.96 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.96 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.96 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.96 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.96 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.96 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.96 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.96 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.96 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.96 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.96 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.96 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.96 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.96 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.96 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.96 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.96 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.96 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.96 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.96 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.96 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.96 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.96 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.96 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.96 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.96 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.96 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.96 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.96 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.96 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.96 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.96 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.96 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.96 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.96 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.96 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.96 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.96 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.96 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.96 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.96 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.96 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.96 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.96 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.96 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.96 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.96 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.95 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.95 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.95 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.95 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.95 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.95 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.95 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.95 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.95 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.95 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.95 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.95 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.95 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.95 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.95 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.95 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.95 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.95 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.95 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.95 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.95 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.95 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.95 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.95 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.95 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.95 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.95 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.95 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.95 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.95 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.95 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.95 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.95 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.95 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.95 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.95 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.95 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.94 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.94 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.94 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.94 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.94 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.94 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.94 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.94 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.94 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.94 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.94 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.94 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.94 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.94 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.94 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.94 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.94 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.94 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.94 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.94 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.94 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.94 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.94 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.94 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.94 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.94 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.94 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.94 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.94 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.94 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.94 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.94 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.94 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.94 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.93 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.93 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.93 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.93 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.93 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.93 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.93 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.93 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.93 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.93 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.93 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.93 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.92 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.92 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.92 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.92 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.92 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.92 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.91 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.91 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.91 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.91 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.91 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.9 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.89 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.89 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.88 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.86 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.85 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.85 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.84 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.82 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.81 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.81 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.8 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.79 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.77 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.75 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.73 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.73 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.73 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.73 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.72 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.72 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.7 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.7 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.69 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.68 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.66 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.66 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.66 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.65 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.64 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.64 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.63 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.6 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.57 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.57 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.53 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.51 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.49 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.49 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.45 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.44 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.44 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.43 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.43 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.43 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.43 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.43 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.42 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.39 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.39 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.38 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.37 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.37 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.37 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.37 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.37 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.36 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.36 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.35 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.34 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.34 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.33 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.32 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.32 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.31 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.31 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.3 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.27 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.26 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.26 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.25 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.25 | |
| KOG1308 | 377 | consensus Hsp70-interacting protein Hip/Transient | 99.25 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.25 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.25 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.24 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.23 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.23 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.22 | |
| COG5010 | 257 | TadD Flp pilus assembly protein TadD, contains TPR | 99.21 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.19 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.18 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.18 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.16 | |
| PRK10803 | 263 | tol-pal system protein YbgF; Provisional | 99.15 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.14 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 99.14 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.14 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.12 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.12 | |
| PLN03098 | 453 | LPA1 LOW PSII ACCUMULATION1; Provisional | 99.11 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 99.11 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.1 | |
| COG4235 | 287 | Cytochrome c biogenesis factor [Posttranslational | 99.1 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.09 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.08 | |
| PRK10049 | 765 | pgaA outer membrane protein PgaA; Provisional | 99.08 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.07 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.05 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.05 | |
| KOG1173 | 611 | consensus Anaphase-promoting complex (APC), Cdc16 | 99.05 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 99.02 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.01 | |
| PRK11447 | 1157 | cellulose synthase subunit BcsC; Provisional | 99.01 | |
| PF13429 | 280 | TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2 | 99.0 |
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=286.60 Aligned_cols=169 Identities=20% Similarity=0.309 Sum_probs=142.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~ 77 (357)
|++|||++++. ..+.+++...-+|+.+|++||.|||. .+ ||||||||+|||++..|.|||||||.++....+ .+
T Consensus 160 MDgGSLd~~~k--~~g~i~E~~L~~ia~~VL~GL~YLh~~~~-IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~t 236 (364)
T KOG0581|consen 160 MDGGSLDDILK--RVGRIPEPVLGKIARAVLRGLSYLHEERK-IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANT 236 (364)
T ss_pred cCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhccC-eeeccCCHHHeeeccCCCEEeccccccHHhhhhhccc
Confidence 78999999994 45889999999999999999999996 66 999999999999999999999999999865544 57
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccc---cCCCCChh-hHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC---LEGHFSND-DGTELVR 153 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~ 153 (357)
++||..|||||.+.++.|+.++||||||++++|+++|+.|+..... ....+..++... ..+..|.. ++++++.
T Consensus 237 fvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~---~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~ 313 (364)
T KOG0581|consen 237 FVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP---PYLDIFELLCAIVDEPPPRLPEGEFSPEFRS 313 (364)
T ss_pred ccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC---CCCCHHHHHHHHhcCCCCCCCcccCCHHHHH
Confidence 8999999999999999999999999999999999999998766410 011122222211 11234444 7889999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
||..||++||.+|||+.+++.|
T Consensus 314 FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 314 FVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HHHHHhcCCcccCCCHHHHhcC
Confidence 9999999999999999999997
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=286.86 Aligned_cols=180 Identities=27% Similarity=0.403 Sum_probs=152.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-CeEEecCCcccccCC---C-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRD---G- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~---~- 75 (357)
|++|+|.+++++..++.+++..+++|+.||++||.|||++++||||||||+|||++.++ ++||+|||+++.... .
T Consensus 122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~ 201 (362)
T KOG0192|consen 122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSM 201 (362)
T ss_pred CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccc
Confidence 78999999997545789999999999999999999999998789999999999999997 999999999986553 2
Q ss_pred CccccCCCCCCccccc--cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLR--TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
+...||+.|||||++. ...++.++||||||+++|||+||+.||.....- .....++....+..++..+++.+..
T Consensus 202 ~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~----~~~~~v~~~~~Rp~~p~~~~~~l~~ 277 (362)
T KOG0192|consen 202 TSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV----QVASAVVVGGLRPPIPKECPPHLSS 277 (362)
T ss_pred cCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH----HHHHHHHhcCCCCCCCccCCHHHHH
Confidence 2358999999999999 568999999999999999999999998765321 1122233334455566668899999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCccccccC
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQKEAE 184 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~ 184 (357)
+|.+||..||..||++.+++..|+.+.....
T Consensus 278 l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 278 LMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred HHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999998876543
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=272.30 Aligned_cols=181 Identities=33% Similarity=0.588 Sum_probs=152.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CceeecCCCCCeeeCCCCCeEEecCCcccccCC-CCc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG--RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-GKS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-~~~ 77 (357)
|+||||+++|+.....+++|.++++|+.++|+||+|||... +||||||||+|||||+++.+||+|||+++.... ...
T Consensus 154 m~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~ 233 (361)
T KOG1187|consen 154 MPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTS 233 (361)
T ss_pred cCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccc
Confidence 78999999997533339999999999999999999999965 599999999999999999999999999987664 332
Q ss_pred c----ccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcc-----------hhHhhhcCccccccccccC-C
Q 018381 78 Y----STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH-----------ALDLIRGKNFLMLMDSCLE-G 141 (357)
Q Consensus 78 ~----~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~~-~ 141 (357)
. .||.+|++||+...+..+.++|||||||+++||+||+.+.... ....+....+.+++++.+. .
T Consensus 234 ~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~ 313 (361)
T KOG1187|consen 234 VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEG 313 (361)
T ss_pred eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCC
Confidence 2 7999999999999999999999999999999999999765421 1233444567778888776 5
Q ss_pred CCCh-hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 142 HFSN-DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 142 ~~~~-~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
.++. .....+..+..+|+..+|..||+|.+|++.|+.+..
T Consensus 314 ~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 314 EYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred CCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 5554 567779999999999999999999999999855543
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=274.52 Aligned_cols=176 Identities=26% Similarity=0.361 Sum_probs=153.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCcc--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY-- 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-- 78 (357)
|++|||.+||....++.+...+.+.|+.|||+||+||++++ +|||||-..||||+++..+||+|||+++...++...
T Consensus 283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~-~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~ 361 (468)
T KOG0197|consen 283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN-YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS 361 (468)
T ss_pred cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC-ccchhhhhhheeeccCceEEEcccccccccCCCceeec
Confidence 78999999997657889999999999999999999999999 999999999999999999999999999955544321
Q ss_pred c---cCCCCCCccccccCCCCccccccchHHHHHHHHhC-CCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 79 S---TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG-KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 79 ~---gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
. -++-|.|||++..++++.+||||||||+||||+|- +.|++. +....+.+.++...+.+.|..||+.+.++
T Consensus 362 ~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~-----msn~ev~~~le~GyRlp~P~~CP~~vY~l 436 (468)
T KOG0197|consen 362 EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG-----MSNEEVLELLERGYRLPRPEGCPDEVYEL 436 (468)
T ss_pred CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCC-----CCHHHHHHHHhccCcCCCCCCCCHHHHHH
Confidence 2 24679999999999999999999999999999984 445444 34455677778888888999999999999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
|..||..+|++|||+..+...|+.+...
T Consensus 437 M~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 437 MKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred HHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 9999999999999999999888876554
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=250.45 Aligned_cols=170 Identities=20% Similarity=0.244 Sum_probs=141.0
Q ss_pred CCCCchhhhhc--cCCCCCCCHHHHHHHHHHHHHHHHHHhcC---CCceeecCCCCCeeeCCCCCeEEecCCcccccCCC
Q 018381 1 MPNETLSKHLF--HWENQPMKWAMRVRVALYLAQALDYCSSK---GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~--~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 75 (357)
+.+|+|...|. +++++.+++.++|+++.|++.||..||++ +.|+||||||.||+|+.+|.|||+|||+++.....
T Consensus 102 c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~ 181 (375)
T KOG0591|consen 102 CDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSK 181 (375)
T ss_pred hcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcch
Confidence 46899999996 35678899999999999999999999993 33999999999999999999999999999988765
Q ss_pred C----ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCC-hhhHHH
Q 018381 76 K----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS-NDDGTE 150 (357)
Q Consensus 76 ~----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 150 (357)
. +++|||.||+||.+.+.+|+.+|||||+||++|||+.-+.||.+.....+..+. ... ... +.| ...+.+
T Consensus 182 ~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI--~qg--d~~-~~p~~~YS~~ 256 (375)
T KOG0591|consen 182 TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKI--EQG--DYP-PLPDEHYSTD 256 (375)
T ss_pred hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHH--HcC--CCC-CCcHHHhhhH
Confidence 4 568999999999999999999999999999999999999999887443333221 111 111 223 557889
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+..||..|+..||..||+.-.++..
T Consensus 257 l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 257 LRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred HHHHHHHHccCCcccCCCcchHHHH
Confidence 9999999999999999985444444
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-37 Score=267.47 Aligned_cols=173 Identities=23% Similarity=0.374 Sum_probs=139.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-CCCeEEecCCcccccCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRD----- 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~----- 74 (357)
+++|||.+++.+. ++.|++..+..+.+||++||.|||+++ ||||||||+|||++. ++.+||+|||+++....
T Consensus 98 ~~~GsL~~~~~~~-g~~l~E~~v~~ytr~iL~GL~ylHs~g-~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~ 175 (313)
T KOG0198|consen 98 APGGSLSDLIKRY-GGKLPEPLVRRYTRQILEGLAYLHSKG-IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKS 175 (313)
T ss_pred cCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCcccceEEEeCCCCeEEeccCccccccccccccc
Confidence 5899999999643 338999999999999999999999999 999999999999999 79999999999875542
Q ss_pred --CCccccCCCCCCccccccCC-CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 75 --GKSYSTNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 75 --~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
.....||+.|||||++.++. ....+|||||||++.||+||+.||... .... ............+.+|...+.+.
T Consensus 176 ~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~~--~~~~~ig~~~~~P~ip~~ls~~a 252 (313)
T KOG0198|consen 176 DSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FEEA--EALLLIGREDSLPEIPDSLSDEA 252 (313)
T ss_pred cccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cchH--HHHHHHhccCCCCCCCcccCHHH
Confidence 23568999999999999643 345999999999999999999887652 0000 00111111112235677788999
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhCc
Q 018381 152 VRLASRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
.+|+.+|+..+|++|||+.+++.|.-.
T Consensus 253 ~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 253 KDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred HHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 999999999999999999999998443
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=264.30 Aligned_cols=171 Identities=21% Similarity=0.271 Sum_probs=140.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC---CCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~-- 75 (357)
|.||+|.+++. .++.+.+..-..++.|++.|+.|||++| |+||||||+|||+..+ ..+||+|||+|+..+..
T Consensus 258 v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~G-I~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sf 334 (475)
T KOG0615|consen 258 VEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQG-IIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSF 334 (475)
T ss_pred ecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcC-cccccCCcceEEeccCCcceEEEecccchhhcccccee
Confidence 68999999996 6788999999999999999999999999 9999999999999866 67999999999988654
Q ss_pred -CccccCCCCCCccccccCCC---CccccccchHHHHHHHHhCCCCCCcchhHh-hhcCccccccccccCCCCChhhHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRV---IPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~---~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
.+++||+.|.|||++.+..+ ..+.|+||+||++|-+++|.+||.....+. +.... ......+.+..-..++++
T Consensus 335 m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI--~~G~y~f~p~~w~~Isee 412 (475)
T KOG0615|consen 335 MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQI--LKGRYAFGPLQWDRISEE 412 (475)
T ss_pred hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHH--hcCcccccChhhhhhhHH
Confidence 47899999999999987554 237799999999999999999988764333 11110 000111222223457889
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
..++|.+||+.||+.|||+.+++.|-
T Consensus 413 a~dlI~~mL~VdP~~R~s~~eaL~hp 438 (475)
T KOG0615|consen 413 ALDLINWMLVVDPENRPSADEALNHP 438 (475)
T ss_pred HHHHHHHhhEeCcccCcCHHHHhcCh
Confidence 99999999999999999999999983
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=267.96 Aligned_cols=167 Identities=18% Similarity=0.300 Sum_probs=142.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
|+||+|.|.+ ....+++.++..|+++++.||+|||.++ |+|||||.+|||++.+|.+||+|||+|...... .
T Consensus 352 m~ggsLTDvV---t~~~~~E~qIA~Icre~l~aL~fLH~~g-IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~ 427 (550)
T KOG0578|consen 352 MEGGSLTDVV---TKTRMTEGQIAAICREILQGLKFLHARG-IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS 427 (550)
T ss_pred cCCCchhhhh---hcccccHHHHHHHHHHHHHHHHHHHhcc-eeeeccccceeEeccCCcEEEeeeeeeeccccccCccc
Confidence 6899999999 5667999999999999999999999999 999999999999999999999999999866543 4
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC-ccccccccccCCCCChhhHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-NFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
+.+||+.|||||++....|+++.||||||++++||+-|.+||.... .++.. .+.. ........+...++.+++|+
T Consensus 428 TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~--PlrAlyLIa~--ng~P~lk~~~klS~~~kdFL 503 (550)
T KOG0578|consen 428 TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN--PLRALYLIAT--NGTPKLKNPEKLSPELKDFL 503 (550)
T ss_pred cccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC--hHHHHHHHhh--cCCCCcCCccccCHHHHHHH
Confidence 6789999999999999999999999999999999999998877531 11111 0111 11222234667889999999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 018381 156 SRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+||+.|+.+|+++.++|+|
T Consensus 504 ~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 504 DRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HHHhhcchhcCCCHHHHhcC
Confidence 99999999999999999997
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=266.77 Aligned_cols=166 Identities=22% Similarity=0.315 Sum_probs=141.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
.|||+|.++|. .-+.|++.....++.||+.||+|||++| ||||||||+||||+.||++||+|||.++....
T Consensus 156 A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~G-IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~ 232 (604)
T KOG0592|consen 156 APNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNG-IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQE 232 (604)
T ss_pred cCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeEcCCCcEEEeeccccccCChhhcccc
Confidence 48999999995 4589999999999999999999999999 99999999999999999999999999985432
Q ss_pred ---------C--CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCC
Q 018381 75 ---------G--KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 143 (357)
Q Consensus 75 ---------~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
. .+++||..|.+||++..+..++.+|+|+|||++|.|+.|++||.....- ..+++++. +.-.+
T Consensus 233 ~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney----liFqkI~~--l~y~f 306 (604)
T KOG0592|consen 233 NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY----LIFQKIQA--LDYEF 306 (604)
T ss_pred CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH----HHHHHHHH--hcccC
Confidence 1 3478999999999999999999999999999999999999888754211 11222222 12246
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+++.++.+.+||.++|+.||++|++..+|.+|
T Consensus 307 p~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 307 PEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred CCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 77777999999999999999999999999887
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=253.00 Aligned_cols=167 Identities=23% Similarity=0.269 Sum_probs=138.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC----CCC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~ 76 (357)
+.||.|+-+|. +.+.|++..+.-++.+|+.||.|||+++ ||||||||+||||+..|+++|+|||+++..- ...
T Consensus 107 ~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~g-IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~ 183 (357)
T KOG0598|consen 107 LNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKG-IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATR 183 (357)
T ss_pred cCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHeeecCCCcEEEeccccchhcccCCCccc
Confidence 57999999994 6789999999999999999999999999 9999999999999999999999999998443 234
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+++||+.|||||++.+..++..+|-||+|+++|||++|.+||.......+....... . ....+...+.+.++++.
T Consensus 184 tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~----k-~~~~p~~ls~~ardll~ 258 (357)
T KOG0598|consen 184 TFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKG----K-LPLPPGYLSEEARDLLK 258 (357)
T ss_pred cccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcC----c-CCCCCccCCHHHHHHHH
Confidence 679999999999999999999999999999999999999998876433322211111 1 11234446788999999
Q ss_pred HhccCCCCCCC----CHHHHHHH
Q 018381 157 RCLQYEPRERP----NAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rp----s~~~v~~~ 175 (357)
++|+.||++|. ++.+|..|
T Consensus 259 ~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 259 KLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred HHhccCHHHhcCCCCChHHhhcC
Confidence 99999999995 55565544
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=267.07 Aligned_cols=166 Identities=19% Similarity=0.273 Sum_probs=142.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
+++|+|.+++. ..+++++.++..++.||+.||.|||+.+ |||||||..|++|+++.+|||+|||||..... ..
T Consensus 100 C~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~-IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~ 176 (592)
T KOG0575|consen 100 CHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLG-IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKK 176 (592)
T ss_pred cCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcC-ceecccchhheeecCcCcEEecccceeeeecCcccccc
Confidence 57899999984 6789999999999999999999999999 99999999999999999999999999986653 35
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+.+|||.|+|||++.....+..+||||+||++|.|++|++||........-.. .+..+ -.+|...+.+..+||.
T Consensus 177 TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~--Ik~~~----Y~~P~~ls~~A~dLI~ 250 (592)
T KOG0575|consen 177 TLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNK--IKLNE----YSMPSHLSAEAKDLIR 250 (592)
T ss_pred eecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHH--HHhcC----cccccccCHHHHHHHH
Confidence 78999999999999988899999999999999999999999876532221111 11111 1235577789999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
.+|..+|.+|||+++|+.|
T Consensus 251 ~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 251 KLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred HHhcCCcccCCCHHHHhcC
Confidence 9999999999999999987
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=266.41 Aligned_cols=168 Identities=18% Similarity=0.280 Sum_probs=145.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
|+||.|++++. .++++++.++.++++||+.|+.|||.-+ |+||||||+|+||+..+.+||+|||+|.....+ .+
T Consensus 94 v~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~-icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeT 170 (786)
T KOG0588|consen 94 VPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFN-ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLET 170 (786)
T ss_pred cCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhc-ceeccCCchhhhhhcccCEeeeccceeecccCCccccc
Confidence 68999999996 6899999999999999999999999999 999999999999999999999999999866655 47
Q ss_pred cccCCCCCCccccccCCC-CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
.+|++.|.+||++.|.+| +.++||||+|||||.|+||+.||.++....+-. ++....+ ..|..++.+..+||.
T Consensus 171 SCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLl----KV~~G~f--~MPs~Is~eaQdLLr 244 (786)
T KOG0588|consen 171 SCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLL----KVQRGVF--EMPSNISSEAQDLLR 244 (786)
T ss_pred cCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHH----HHHcCcc--cCCCcCCHHHHHHHH
Confidence 799999999999999998 569999999999999999999998654332211 1111112 246778899999999
Q ss_pred HhccCCCCCCCCHHHHHHHhC
Q 018381 157 RCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+||..||..|.|+++|++|-.
T Consensus 245 ~ml~VDp~~RiT~~eI~kHP~ 265 (786)
T KOG0588|consen 245 RMLDVDPSTRITTEEILKHPF 265 (786)
T ss_pred HHhccCccccccHHHHhhCch
Confidence 999999999999999999843
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=257.57 Aligned_cols=167 Identities=23% Similarity=0.268 Sum_probs=140.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC-CCeEEecCCcccccC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSR----DG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~----~~ 75 (357)
+.||+|.++|. +.+++.+.++.+++.|+++|++|||+++ |+||||||+|||++.+ +.+||+|||++.... ..
T Consensus 102 ~~gGdL~~~i~--~~g~l~E~~ar~~F~Qlisav~y~H~~g-i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l 178 (370)
T KOG0583|consen 102 CSGGDLFDYIV--NKGRLKEDEARKYFRQLISAVAYCHSRG-IVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLL 178 (370)
T ss_pred cCCccHHHHHH--HcCCCChHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcc
Confidence 46899999995 4789999999999999999999999999 9999999999999999 999999999998772 23
Q ss_pred CccccCCCCCCccccccCC-CC-ccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhh-HHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGR-VI-PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD-GTELV 152 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~-~~-~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 152 (357)
.+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||.......+... +.... -.+|..+ ++++.
T Consensus 179 ~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k----i~~~~--~~~p~~~~S~~~~ 252 (370)
T KOG0583|consen 179 KTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK----IRKGE--FKIPSYLLSPEAR 252 (370)
T ss_pred cCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH----HhcCC--ccCCCCcCCHHHH
Confidence 5779999999999999866 75 689999999999999999999986432222211 11111 1244555 88999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHh
Q 018381 153 RLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
.++.+||..+|.+|+++.+|+.+=
T Consensus 253 ~Li~~mL~~~P~~R~t~~~i~~h~ 276 (370)
T KOG0583|consen 253 SLIEKMLVPDPSTRITLLEILEHP 276 (370)
T ss_pred HHHHHHcCCCcccCCCHHHHhhCh
Confidence 999999999999999999999763
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=245.99 Aligned_cols=169 Identities=17% Similarity=0.222 Sum_probs=138.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC------CCeEEecCCcccccCC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD------GNPRLSCFGLMKNSRD 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~------~~~kl~Dfg~~~~~~~ 74 (357)
|.||+|.+||. ..+.+++.++..++.||+.||++||+++ ||||||||+||||+.+ -.+||+|||+|+....
T Consensus 91 C~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~-IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~ 167 (429)
T KOG0595|consen 91 CNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENN-IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQP 167 (429)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCcceEEeccCCCCCCCceEEecccchhhhCCc
Confidence 57999999995 5669999999999999999999999999 9999999999999865 4589999999998876
Q ss_pred C---CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 75 G---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 75 ~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
+ .+.+|++.|||||+++.++|+.|+|+||+|+++|++++|+.||.......+.. ..+. ........+......+
T Consensus 168 ~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~--~~~k-~~~~~~~~~~~~s~~~ 244 (429)
T KOG0595|consen 168 GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLL--YIKK-GNEIVPVLPAELSNPL 244 (429)
T ss_pred hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHH--HHhc-cccccCchhhhccCch
Confidence 5 36799999999999999999999999999999999999999988654443332 1111 1112222344455567
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 018381 152 VRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+++...+..+|.+|.++.+.+.+
T Consensus 245 ~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 245 RELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred hhhhhHHHhcCccccCchHHhhhh
Confidence 788999999999999887777655
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=252.93 Aligned_cols=173 Identities=20% Similarity=0.286 Sum_probs=150.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC---CCc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---GKS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~---~~~ 77 (357)
++.|-|.+.|. .+++++....+.|..+|+.|+.|||... |||||||+-||||+.+..|||+|||.++.... ..+
T Consensus 194 Ca~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hK-IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMS 270 (904)
T KOG4721|consen 194 CAQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHK-IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMS 270 (904)
T ss_pred cccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhh-HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhh
Confidence 46789999994 7889999999999999999999999998 99999999999999999999999999986554 357
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
+.||..|||||++...+.+.|.||||||||||||+||..|+.+. -....+..+....+..+.|..||+.+.-||+.
T Consensus 271 FaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdV----dssAIIwGVGsNsL~LpvPstcP~GfklL~Kq 346 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDV----DSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQ 346 (904)
T ss_pred hhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCcccc----chheeEEeccCCcccccCcccCchHHHHHHHH
Confidence 88999999999999999999999999999999999999886542 11122334444555667788999999999999
Q ss_pred hccCCCCCCCCHHHHHHHhCccc
Q 018381 158 CLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 158 cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
||...|..||++++|+.||+...
T Consensus 347 cw~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 347 CWNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred HHhcCCCCCccHHHHHHHHhhcC
Confidence 99999999999999999988643
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=246.77 Aligned_cols=174 Identities=20% Similarity=0.247 Sum_probs=135.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
|.+||+.+.+...-...|++..+..|++++++||.|||.+| .||||||+.||||+.+|.|||+|||.+......
T Consensus 106 Ma~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G-~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~ 184 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG-HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQV 184 (516)
T ss_pred hcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC-ceecccccccEEEcCCCcEEEcCceeeeeecccCceee
Confidence 67999999997666677999999999999999999999999 999999999999999999999999986532211
Q ss_pred ---CccccCCCCCCcccccc--CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccccccc----ccCCCCChh
Q 018381 76 ---KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS----CLEGHFSND 146 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 146 (357)
.+++||++|||||+++. ..|+.|+||||||++..||++|..||.....-.+--..+....+. .+...-...
T Consensus 185 ~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~ 264 (516)
T KOG0582|consen 185 TRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKK 264 (516)
T ss_pred EeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhh
Confidence 45689999999999654 568999999999999999999999875321000000001111110 111111123
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 147 DGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 147 ~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+..++++|..||++||.+|||+++++++
T Consensus 265 ~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 265 FSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred hcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 45689999999999999999999999875
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=255.58 Aligned_cols=161 Identities=23% Similarity=0.375 Sum_probs=128.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC------CccccCCCCCCccc
Q 018381 16 QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEY 89 (357)
Q Consensus 16 ~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~ 89 (357)
.++++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+++.|+|||+
T Consensus 169 ~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 247 (338)
T cd05102 169 SPLTMEDLICYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPES 247 (338)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHH
Confidence 35889999999999999999999999 999999999999999999999999999754322 12345678999999
Q ss_pred cccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC
Q 018381 90 LRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 168 (357)
Q Consensus 90 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps 168 (357)
+.+..++.++|||||||++|||++ |..||........ +............+..+++.+.+++.+||..||++|||
T Consensus 248 ~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs 323 (338)
T cd05102 248 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE----FCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPT 323 (338)
T ss_pred hhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH----HHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcC
Confidence 998889999999999999999997 8888765321110 00001011111234456788999999999999999999
Q ss_pred HHHHHHHhCcccc
Q 018381 169 AKSLVASLTPLQK 181 (357)
Q Consensus 169 ~~~v~~~l~~~~~ 181 (357)
+.++++.|+.+..
T Consensus 324 ~~el~~~l~~~~~ 336 (338)
T cd05102 324 FSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=233.85 Aligned_cols=167 Identities=22% Similarity=0.253 Sum_probs=139.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC---c
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---S 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~ 77 (357)
||.|.|+|||. ..-.+++....+|++|+.+|++|||.++ ||||||||+|||++++.++||+|||++.....+. .
T Consensus 105 ~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~-IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLre 181 (411)
T KOG0599|consen 105 MPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARN-IVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRE 181 (411)
T ss_pred cccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhh-hhhcccChhheeeccccceEEeccceeeccCCchhHHH
Confidence 68899999995 5678999999999999999999999999 9999999999999999999999999999887775 4
Q ss_pred cccCCCCCCcccccc------CCCCccccccchHHHHHHHHhCCCCCCcchh----HhhhcCccccccccccCCCCChhh
Q 018381 78 YSTNLAFTPPEYLRT------GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL----DLIRGKNFLMLMDSCLEGHFSNDD 147 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 147 (357)
.+|||+|+|||.+.- ..|+...|+|++||++|.|+.|..||+-... ..+..++ ..++.+--.+.
T Consensus 182 lCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGk------yqF~speWadi 255 (411)
T KOG0599|consen 182 LCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGK------YQFRSPEWADI 255 (411)
T ss_pred hcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcc------cccCCcchhhc
Confidence 689999999998753 4577889999999999999999988764321 1111111 11222222356
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 148 GTELVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 148 ~~~~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
+.+..+||.+||+.||.+|.|++++++|-
T Consensus 256 s~~~KdLIsrlLqVdp~~Ritake~LaHp 284 (411)
T KOG0599|consen 256 SATVKDLISRLLQVDPTKRITAKEALAHP 284 (411)
T ss_pred cccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence 78899999999999999999999999973
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=255.69 Aligned_cols=175 Identities=23% Similarity=0.368 Sum_probs=141.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
++|-||+.+|+. ....|+..+.+.|++||+.|+.|||.++ |||||||..||++.++++|||+|||++.....
T Consensus 469 CeGsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK~-IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q 546 (678)
T KOG0193|consen 469 CEGSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAKN-IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQ 546 (678)
T ss_pred ccCchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhhh-hhhhhccccceEEccCCcEEEecccceeeeeeeccccc
Confidence 578899999953 5678999999999999999999999999 99999999999999999999999999863321
Q ss_pred CCccccCCCCCCcccccc---CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccC---CCCChhhH
Q 018381 75 GKSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE---GHFSNDDG 148 (357)
Q Consensus 75 ~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 148 (357)
.....|.+.|||||+++. .+|++.+||||||+++|||++|..|+.....+ ..+..+.+.... .....+++
T Consensus 547 ~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d----qIifmVGrG~l~pd~s~~~s~~p 622 (678)
T KOG0193|consen 547 LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD----QIIFMVGRGYLMPDLSKIRSNCP 622 (678)
T ss_pred cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh----heEEEecccccCccchhhhccCH
Confidence 124467889999999975 57899999999999999999999997733221 111111122111 12345788
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 149 TELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 149 ~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
.++.+|+..||.+++++||.+.+|+..|+.+..
T Consensus 623 k~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 623 KAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred HHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 999999999999999999999999998777655
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=248.35 Aligned_cols=173 Identities=16% Similarity=0.225 Sum_probs=141.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Ccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~ 78 (357)
++||+|.+++. ..+.+++.+.+.++.|++.||.|||+. + ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 104 ~~~g~L~~~l~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~ 180 (283)
T PHA02988 104 CTRGYLREVLD--KEKDLSFKTKLDMAIDCCKGLYNLYKYTN-KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKN 180 (283)
T ss_pred CCCCcHHHHHh--hCCCCChhHHHHHHHHHHHHHHHHHhcCC-CCCCcCChhhEEECCCCcEEEcccchHhhhccccccc
Confidence 57899999995 456799999999999999999999985 6 899999999999999999999999998854432 345
Q ss_pred ccCCCCCCcccccc--CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 79 STNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 79 ~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
.||..|+|||++.+ ..++.++|||||||++|||++|+.||.......+... ......+...+..+++.+.+++.
T Consensus 181 ~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~~l~~li~ 256 (283)
T PHA02988 181 VNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDL----IINKNNSLKLPLDCPLEIKCIVE 256 (283)
T ss_pred cCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHhcCCCCCCCCcCcHHHHHHHH
Confidence 68899999999976 6789999999999999999999999875432221111 11111222344467889999999
Q ss_pred HhccCCCCCCCCHHHHHHHhCccc
Q 018381 157 RCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
+||+.||++|||+.+++..|+.+.
T Consensus 257 ~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 257 ACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HHhcCCcccCcCHHHHHHHHHHHH
Confidence 999999999999999999988764
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=245.98 Aligned_cols=167 Identities=18% Similarity=0.293 Sum_probs=141.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
|.||++.+.+. .+..+++..+.-++++++.|+.|||..+ .+|||||+.|||+..+|.+||+|||++...... .
T Consensus 93 ~~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~-kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~ 169 (467)
T KOG0201|consen 93 CGGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEK-KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRK 169 (467)
T ss_pred hcCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcc-eecccccccceeEeccCcEEEEecceeeeeechhhccc
Confidence 46899999993 4556699999999999999999999999 999999999999999999999999998755433 5
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+++||+.|||||++.+..|+.++||||||++.+||++|.+|+... ....+...+.....+.....+++.+++||.
T Consensus 170 tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~-----hPmrvlflIpk~~PP~L~~~~S~~~kEFV~ 244 (467)
T KOG0201|consen 170 TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKL-----HPMRVLFLIPKSAPPRLDGDFSPPFKEFVE 244 (467)
T ss_pred cccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCccc-----CcceEEEeccCCCCCccccccCHHHHHHHH
Confidence 789999999999999889999999999999999999999876542 113333344443333444467788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
.||.++|+.||++.++++|
T Consensus 245 ~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 245 ACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred HHhhcCcccCcCHHHHhhh
Confidence 9999999999999999987
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-33 Score=245.29 Aligned_cols=169 Identities=20% Similarity=0.291 Sum_probs=136.6
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Ccccc
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYST 80 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~g 80 (357)
.+|++++.++ ++.|++..+..|+.||++||+|+|..| +.|||+||+|||+..+..+||+|||+||..... +.++.
T Consensus 94 ~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G-fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVS 171 (538)
T KOG0661|consen 94 CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG-FFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVS 171 (538)
T ss_pred hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC-cccccCChhheEecccceeEecccccccccccCCCcchhhh
Confidence 4788888664 889999999999999999999999999 999999999999999999999999999976543 56788
Q ss_pred CCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcch--hHhhhc---------------Cc--------cccc
Q 018381 81 NLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHA--LDLIRG---------------KN--------FLML 134 (357)
Q Consensus 81 t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~--~~~~~~---------------~~--------~~~~ 134 (357)
|.||+|||++.. +.|+.+.|||++|||++|+.+-++.|++.. ...++. .. +-..
T Consensus 172 TRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~ 251 (538)
T KOG0661|consen 172 TRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQV 251 (538)
T ss_pred cccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcC
Confidence 999999998755 778999999999999999999998888651 111110 00 1111
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 135 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....+..-.+ ..+.++.++|.+|+.+||++|||+.+++++
T Consensus 252 ~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 252 KPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1111111122 367899999999999999999999999997
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-32 Score=245.73 Aligned_cols=172 Identities=18% Similarity=0.262 Sum_probs=137.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
+++|+|.+++.......+++.+++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++...... ..
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG 160 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence 57899998886444567999999999999999999999999 999999999999999999999999998865432 24
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
..||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... .+..... .....++...+..+.+|+.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~-~~~~~~~-~~~~~~~~~~s~~~~~li~~ 238 (285)
T cd05631 161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKRE-EVDRRVK-EDQEEYSEKFSEDAKSICRM 238 (285)
T ss_pred CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHH-HHHHHhh-cccccCCccCCHHHHHHHHH
Confidence 568999999999999899999999999999999999999986532111000 0000000 11122444567889999999
Q ss_pred hccCCCCCCCC-----HHHHHHH
Q 018381 158 CLQYEPRERPN-----AKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rps-----~~~v~~~ 175 (357)
||..||.+||+ +.++++|
T Consensus 239 ~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 239 LLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred HhhcCHHHhcCCCCCCHHHHhcC
Confidence 99999999997 7888876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.4e-33 Score=232.25 Aligned_cols=157 Identities=18% Similarity=0.263 Sum_probs=137.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
++||.|+.+++ ..++|++..+..++.||+.||+|||+.+ |++|||||+|||+|.+|.+||+|||+++..... -+.+
T Consensus 126 v~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~-iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlC 202 (355)
T KOG0616|consen 126 VPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLD-IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLC 202 (355)
T ss_pred cCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcC-eeeccCChHHeeeccCCcEEEEeccceEEecCcEEEec
Confidence 58999999995 6789999999999999999999999999 999999999999999999999999999976654 4779
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
|||.|+|||.++..+++.++|=|||||++|||+.|..||...... ..+.+++.... .+|...+.++++|+...|
T Consensus 203 GTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~----~iY~KI~~~~v--~fP~~fs~~~kdLl~~LL 276 (355)
T KOG0616|consen 203 GTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI----QIYEKILEGKV--KFPSYFSSDAKDLLKKLL 276 (355)
T ss_pred CCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH----HHHHHHHhCcc--cCCcccCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998875331 11223333322 367778889999999999
Q ss_pred cCCCCCC
Q 018381 160 QYEPRER 166 (357)
Q Consensus 160 ~~~p~~R 166 (357)
+.|-.+|
T Consensus 277 ~vD~t~R 283 (355)
T KOG0616|consen 277 QVDLTKR 283 (355)
T ss_pred hhhhHhh
Confidence 9999999
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-32 Score=249.73 Aligned_cols=166 Identities=19% Similarity=0.268 Sum_probs=137.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 77 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 153 (323)
T cd05571 77 ANGGELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCccc
Confidence 57899999995 4568999999999999999999999999 99999999999999999999999999875322 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|||++|+.||............. .. ...++...++.+.++|.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~----~~--~~~~p~~~~~~~~~li~ 227 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL----ME--EIRFPRTLSPEAKSLLA 227 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHH----cC--CCCCCCCCCHHHHHHHH
Confidence 4568999999999998889999999999999999999999987543322211110 01 11244556788999999
Q ss_pred HhccCCCCCCC-----CHHHHHHH
Q 018381 157 RCLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rp-----s~~~v~~~ 175 (357)
+||..||++|| ++.++++|
T Consensus 228 ~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 228 GLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HHccCCHHHcCCCCCCCHHHHHcC
Confidence 99999999999 89999886
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-32 Score=231.09 Aligned_cols=160 Identities=19% Similarity=0.375 Sum_probs=127.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC-CC---CccccCCCCCCccc
Q 018381 14 ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR-DG---KSYSTNLAFTPPEY 89 (357)
Q Consensus 14 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~-~~---~~~~gt~~y~aPE~ 89 (357)
....++...+.+++.|++.|+.|||+.+ +|||||||+||||+.+|.+||||||+|+... ++ +.++.|.||.|||.
T Consensus 94 ~p~G~~~~~vk~~l~Q~l~ai~~cHk~n-~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPEL 172 (396)
T KOG0593|consen 94 YPNGVPSELVKKYLYQLLKAIHFCHKNN-CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPEL 172 (396)
T ss_pred ccCCCCHHHHHHHHHHHHHHhhhhhhcC-eecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhh
Confidence 4567899999999999999999999999 9999999999999999999999999999766 33 34678999999999
Q ss_pred ccc-CCCCccccccchHHHHHHHHhCCCCCCcchh-------------------HhhhcCccc-ccccc------ccCCC
Q 018381 90 LRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL-------------------DLIRGKNFL-MLMDS------CLEGH 142 (357)
Q Consensus 90 ~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-------------------~~~~~~~~~-~~~~~------~~~~~ 142 (357)
+.+ .+|+...|||++||++.||++|.+.|++... ..+....+. .+.-+ .+...
T Consensus 173 LvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k 252 (396)
T KOG0593|consen 173 LVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERK 252 (396)
T ss_pred hcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhh
Confidence 988 7899999999999999999999988887511 111111111 00000 01111
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+ +..+.-+.+++..||..||++|++.++++.|
T Consensus 253 ~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 253 Y-PKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred c-ccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 1 1345578999999999999999999999876
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-32 Score=246.62 Aligned_cols=176 Identities=14% Similarity=0.222 Sum_probs=140.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 90 ~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 167 (316)
T cd05108 90 MPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEERR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYH 167 (316)
T ss_pred CCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEecCCCcEEEccccccccccCCCccee
Confidence 578999999953 4557999999999999999999999999 99999999999999999999999999986543221
Q ss_pred ---cccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 78 ---YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 78 ---~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
..++..|++||++.+..++.++|||||||++|||++ |..|+.+.....+. ...........+..++..+.+
T Consensus 168 ~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 242 (316)
T cd05108 168 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----SILEKGERLPQPPICTIDVYM 242 (316)
T ss_pred ccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHhCCCCCCCCCCCCHHHHH
Confidence 223568999999998889999999999999999997 88887653222211 111111122234456678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
++.+||..+|++||++.+++..|..+....
T Consensus 243 li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 243 IMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 999999999999999999999988776543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-32 Score=242.07 Aligned_cols=172 Identities=20% Similarity=0.297 Sum_probs=139.1
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
+++|+|.+++.... ...+++.+++.++.|++.||.|||+.+ ++|+||||+||++++++.+||+||
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~L~df 168 (283)
T cd05048 90 LAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVKISDF 168 (283)
T ss_pred CCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccccceEEEcCCCcEEECCC
Confidence 46899999995321 156899999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++..... ....+++.|+|||.+.++.++.++|||||||++|||++ |..||......... ..+....
T Consensus 169 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~-----~~i~~~~ 243 (283)
T cd05048 169 GLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVI-----EMIRSRQ 243 (283)
T ss_pred cceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHcCC
Confidence 998754322 23345788999999988889999999999999999998 88887654322221 1111112
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
....+..++..+.+|+.+||..+|++||++.+|+++|+.
T Consensus 244 ~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 244 LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 223455678899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-33 Score=260.10 Aligned_cols=227 Identities=19% Similarity=0.258 Sum_probs=177.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
|+||+|..||+. +.+.|++.++..++++|+.||.||.+++ +|||||...|||++.+..+|++|||++|...+..
T Consensus 712 MENGsLDsFLR~-~DGqftviQLVgMLrGIAsGMkYLsdm~-YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~y 789 (996)
T KOG0196|consen 712 MENGSLDSFLRQ-NDGQFTVIQLVGMLRGIASGMKYLSDMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY 789 (996)
T ss_pred hhCCcHHHHHhh-cCCceEeehHHHHHHHHHHHhHHHhhcC-chhhhhhhhheeeccceEEEeccccceeecccCCCccc
Confidence 799999999954 5677999999999999999999999999 9999999999999999999999999999765443
Q ss_pred -cccc--CCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 -SYST--NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 -~~~g--t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
+..| .+.|.|||.+...+++.+|||||||+++||.++ |.+|++. +.++.+++-++..++.+.|.+||..+.
T Consensus 790 tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd-----mSNQdVIkaIe~gyRLPpPmDCP~aL~ 864 (996)
T KOG0196|consen 790 TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD-----MSNQDVIKAIEQGYRLPPPMDCPAALY 864 (996)
T ss_pred cccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc-----cchHHHHHHHHhccCCCCCCCCcHHHH
Confidence 1222 468999999999999999999999999999875 7788765 455666777778888888999999999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCccccccCCCccc-----ccCCCCCCCCCCCccccCccccccccchhHHHHHHHHh
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYT-----LMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEK 227 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 227 (357)
+|+..||++|-.+||.+.+|+.+|.++......-... ..+.+-...+.+.-+...++++.-....+....+.+..
T Consensus 865 qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~~lld~~~~~~~~f~sv~~WL~aIkm~rY~~~F~~ 944 (996)
T KOG0196|consen 865 QLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQPLLDRSGSDFTPFRSVGDWLEAIKMGRYKEHFAA 944 (996)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCcccccCCCCCCCcccCCHHHHHHHhhhhHHHHHHHh
Confidence 9999999999999999999999999887653221111 11111112222233334445555555555556677777
Q ss_pred hcCCCch
Q 018381 228 VGYKDDE 234 (357)
Q Consensus 228 ~~~~~~~ 234 (357)
.++.+-+
T Consensus 945 ag~~s~~ 951 (996)
T KOG0196|consen 945 AGYTSFE 951 (996)
T ss_pred cCcccHH
Confidence 7776544
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-32 Score=223.37 Aligned_cols=172 Identities=19% Similarity=0.210 Sum_probs=138.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC---CCeEEecCCcccccCCCC-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~- 76 (357)
|.||+|..-|. .+..+++..+-..++||+++|.|+|.++ |||||+||.|+|+... .-+||+|||+++....+.
T Consensus 92 m~G~dl~~eIV--~R~~ySEa~aSH~~rQiLeal~yCH~n~-IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~ 168 (355)
T KOG0033|consen 92 VTGGELFEDIV--AREFYSEADASHCIQQILEALAYCHSNG-IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA 168 (355)
T ss_pred ccchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeeeeccCCCceeecccceEEEeCCccc
Confidence 67888887775 3467889999999999999999999999 9999999999999643 348999999999887543
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
.+.|||+||+||++...+++..+|||+.||+||-|+.|.+||++.....+-...... ...+..+.-+.++++.++|
T Consensus 169 ~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g--~yd~~~~~w~~is~~Ak~L 246 (355)
T KOG0033|consen 169 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAG--AYDYPSPEWDTVTPEAKSL 246 (355)
T ss_pred cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhcc--ccCCCCcccCcCCHHHHHH
Confidence 457899999999999999999999999999999999999999884332222111111 1112222234567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhC
Q 018381 155 ASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+++||..||.+|.|+.+.+.|-+
T Consensus 247 vrrML~~dP~kRIta~EAL~HpW 269 (355)
T KOG0033|consen 247 IRRMLTVNPKKRITADEALKHPW 269 (355)
T ss_pred HHHHhccChhhhccHHHHhCCch
Confidence 99999999999999999998843
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-32 Score=241.82 Aligned_cols=167 Identities=21% Similarity=0.243 Sum_probs=137.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
+++|+|.+++. ..+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....
T Consensus 83 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (291)
T cd05612 83 VPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLC 159 (291)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEEecCcchhccCCccccc
Confidence 57899999995 4568999999999999999999999999 999999999999999999999999998865443 3457
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
||+.|+|||++.+..++.++|||||||++|+|++|+.||........... .... ...++...+..+.++|.+||
T Consensus 160 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~----i~~~--~~~~~~~~~~~~~~li~~~l 233 (291)
T cd05612 160 GTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEK----ILAG--KLEFPRHLDLYAKDLIKKLL 233 (291)
T ss_pred CChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhC--CcCCCccCCHHHHHHHHHHc
Confidence 89999999999988889999999999999999999998865432211111 1111 11234455678999999999
Q ss_pred cCCCCCCCC-----HHHHHHHh
Q 018381 160 QYEPRERPN-----AKSLVASL 176 (357)
Q Consensus 160 ~~~p~~Rps-----~~~v~~~l 176 (357)
+.||.+||+ +.+++.|-
T Consensus 234 ~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 234 VVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred CCCHHHccCCccCCHHHHhcCc
Confidence 999999995 89998873
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-32 Score=227.22 Aligned_cols=176 Identities=16% Similarity=0.134 Sum_probs=141.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC---CCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~-- 75 (357)
|+||.|+..|..+....|++.++-.|++||+.|+.|||+.+ |.||||||+|+|... |..+||+|||+++.....
T Consensus 141 meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n-IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~ 219 (400)
T KOG0604|consen 141 MEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN-IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGD 219 (400)
T ss_pred ccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc-hhhccCChhheeeecCCCCcceEecccccccccCCCcc
Confidence 68999999998777788999999999999999999999999 999999999999964 446899999999966543
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccccc--ccccCCCCChhhHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM--DSCLEGHFSNDDGTELV 152 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 152 (357)
.+.+-|+.|.|||++...+|+..+|+||+||++|-|++|.+||+...-..+....-.++. ...+..+--..+++..+
T Consensus 220 L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aK 299 (400)
T KOG0604|consen 220 LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAK 299 (400)
T ss_pred ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHH
Confidence 355679999999999999999999999999999999999998875421111111111111 11122122234688899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
++|+.+|..+|.+|.|+.+++.|-+
T Consensus 300 dlIR~LLkt~PteRlTI~~~m~hpw 324 (400)
T KOG0604|consen 300 DLIRKLLKTEPTERLTIEEVMDHPW 324 (400)
T ss_pred HHHHHHhcCCchhheeHHHhhcCch
Confidence 9999999999999999999999843
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-32 Score=245.09 Aligned_cols=167 Identities=19% Similarity=0.255 Sum_probs=137.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 77 ~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 153 (328)
T cd05593 77 VNGGELFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSGK-IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMK 153 (328)
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccc
Confidence 47899999984 4567999999999999999999999999 99999999999999999999999999875322 12
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||............. . ....++...++++.++|.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~----~--~~~~~p~~~~~~~~~li~ 227 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL----M--EDIKFPRTLSADAKSLLS 227 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhc----c--CCccCCCCCCHHHHHHHH
Confidence 4568999999999998889999999999999999999999986543222211110 0 011234556788999999
Q ss_pred HhccCCCCCCC-----CHHHHHHHh
Q 018381 157 RCLQYEPRERP-----NAKSLVASL 176 (357)
Q Consensus 157 ~cl~~~p~~Rp-----s~~~v~~~l 176 (357)
+||..||++|+ ++.++++|-
T Consensus 228 ~~L~~dP~~R~~~~~~~~~~il~h~ 252 (328)
T cd05593 228 GLLIKDPNKRLGGGPDDAKEIMRHS 252 (328)
T ss_pred HHcCCCHHHcCCCCCCCHHHHhcCC
Confidence 99999999997 899998873
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=235.23 Aligned_cols=173 Identities=20% Similarity=0.305 Sum_probs=140.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.......+++..++.++.|++.||.|||+++ ++||||||+||++++++.+||+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~ 162 (263)
T cd05052 84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 162 (263)
T ss_pred CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence 47899999996545567999999999999999999999999 9999999999999999999999999987654432
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|+|||.+.+..++.++|||||||++|||++ |..|+......... ...........+..++..+.++
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l 237 (263)
T cd05052 163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-----ELLEKGYRMERPEGCPPKVYEL 237 (263)
T ss_pred CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHCCCCCCCCCCCCHHHHHH
Confidence 1223567999999998889999999999999999998 88777653222111 1111122233455677899999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
|.+||..+|++|||+.++++.|+.+
T Consensus 238 i~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 238 MRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHccCCcccCCCHHHHHHHHHhh
Confidence 9999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=220.84 Aligned_cols=168 Identities=20% Similarity=0.237 Sum_probs=131.4
Q ss_pred chhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----cccc
Q 018381 5 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SYST 80 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~g 80 (357)
+|+..|. .....|+..++..++.++++|++|||++. |+||||||.|+|++.+|.+||+|||+++.+.... ..+.
T Consensus 86 dLe~vIk-d~~i~l~pa~iK~y~~m~LkGl~y~H~~~-IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~ 163 (318)
T KOG0659|consen 86 DLEVVIK-DKNIILSPADIKSYMLMTLKGLAYCHSKW-ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVV 163 (318)
T ss_pred cHHHHhc-ccccccCHHHHHHHHHHHHHHHHHHHhhh-hhcccCCccceEEcCCCcEEeecccchhccCCCCccccccee
Confidence 5666664 36678999999999999999999999999 9999999999999999999999999999776432 2367
Q ss_pred CCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchh-------------------Hhhhc----Cccccccc
Q 018381 81 NLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL-------------------DLIRG----KNFLMLMD 136 (357)
Q Consensus 81 t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-------------------~~~~~----~~~~~~~~ 136 (357)
|.+|.|||.+.| ..|+...||||.||++.||+-|.+.+++... +.+.. ..+.....
T Consensus 164 TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~ 243 (318)
T KOG0659|consen 164 TRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPK 243 (318)
T ss_pred eeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCC
Confidence 999999999988 5689999999999999999999876665411 00000 00110111
Q ss_pred cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 137 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 137 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.... .-+.++++..+++..+|.+||.+|++++|++++
T Consensus 244 ~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 244 PPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred Ccccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11111 112356677999999999999999999999988
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-32 Score=243.67 Aligned_cols=166 Identities=20% Similarity=0.251 Sum_probs=136.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 75 ~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 151 (312)
T cd05585 75 INGGELFHHLQ--REGRFDLSRARFYTAELLCALENLHKFN-VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTN 151 (312)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccc
Confidence 57999999995 4567999999999999999999999999 99999999999999999999999999875322 22
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||........... .... ...++...++.+.++|.
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~li~ 225 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRK----ILQE--PLRFPDGFDRDAKDLLI 225 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHH----HHcC--CCCCCCcCCHHHHHHHH
Confidence 45689999999999988899999999999999999999999875432222111 1111 11244556788999999
Q ss_pred HhccCCCCCCCC---HHHHHHH
Q 018381 157 RCLQYEPRERPN---AKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps---~~~v~~~ 175 (357)
+||..||.+||+ +.+++.|
T Consensus 226 ~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 226 GLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHcCCCHHHcCCCCCHHHHHcC
Confidence 999999999975 6777766
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-32 Score=233.88 Aligned_cols=167 Identities=20% Similarity=0.320 Sum_probs=132.0
Q ss_pred chhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC------Ccc
Q 018381 5 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------KSY 78 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~ 78 (357)
+|...|. .+..|+...+..++.||++||.|+|+.+ |+||||||+|+|++.+..+||||||+|+..... +.+
T Consensus 111 DL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAn-ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeY 187 (359)
T KOG0660|consen 111 DLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSAN-VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEY 187 (359)
T ss_pred HHHHHHH--cCccccHHHHHHHHHHHHHhcchhhccc-ccccccchhheeeccCCCEEeccccceeeccccCcccchhcc
Confidence 5666673 5566999999999999999999999999 999999999999999999999999999977421 345
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcch-------------------hHhhhcCcccccc---
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHA-------------------LDLIRGKNFLMLM--- 135 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~-------------------~~~~~~~~~~~~~--- 135 (357)
+.|.+|.|||.+.. ..|+.+.||||+||++.||++|+..|++.. ...+........+
T Consensus 188 VaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~sl 267 (359)
T KOG0660|consen 188 VATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSL 267 (359)
T ss_pred eeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhC
Confidence 67999999998755 678999999999999999999999887640 1111111111111
Q ss_pred cccc----CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 DSCL----EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 ~~~~----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+... ...++ +..+...+|+.+||+.||.+|+|+++.++|
T Consensus 268 p~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 268 PQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred CCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1111 11122 456789999999999999999999999997
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=238.90 Aligned_cols=175 Identities=16% Similarity=0.227 Sum_probs=139.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++.. ..+.+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 167 (279)
T cd05111 90 SPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHR-MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYF 167 (279)
T ss_pred CCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEEcCCccceeccCCCcccc
Confidence 479999999953 4567999999999999999999999999 999999999999999999999999999754322
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
....++..|++||++.++.++.++|||||||++|||++ |..||........ ...+........+..++..+.+
T Consensus 168 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 242 (279)
T cd05111 168 YSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-----PDLLEKGERLAQPQICTIDVYM 242 (279)
T ss_pred cCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHCCCcCCCCCCCCHHHHH
Confidence 12345678999999998889999999999999999998 8888765322111 1111111111223345677899
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
++.+||..+|++|||+.++++.|..+...
T Consensus 243 li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 243 VMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred HHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 99999999999999999999998876643
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-32 Score=249.24 Aligned_cols=159 Identities=20% Similarity=0.342 Sum_probs=127.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC------ccccCCCCCCccc
Q 018381 16 QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEY 89 (357)
Q Consensus 16 ~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~ 89 (357)
.++++.++++++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++...... ...+++.|+|||+
T Consensus 207 ~~l~~~~~~~i~~qi~~aL~yLH~~g-iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~ 285 (374)
T cd05106 207 WPLDLDDLLRFSSQVAQGMDFLASKN-CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPES 285 (374)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHCC-EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHH
Confidence 35899999999999999999999999 9999999999999999999999999987554322 1234567999999
Q ss_pred cccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC
Q 018381 90 LRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 168 (357)
Q Consensus 90 ~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps 168 (357)
+.+..++.++|||||||++|+|++ |+.||....... .+............+...++++.++|.+||+.||.+|||
T Consensus 286 ~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs 361 (374)
T cd05106 286 IFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS----KFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPT 361 (374)
T ss_pred hcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH----HHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence 988889999999999999999997 988876532111 111111111222233345688999999999999999999
Q ss_pred HHHHHHHhCcc
Q 018381 169 AKSLVASLTPL 179 (357)
Q Consensus 169 ~~~v~~~l~~~ 179 (357)
+.++++.|+.+
T Consensus 362 ~~~l~~~l~~~ 372 (374)
T cd05106 362 FSQISQLIQRQ 372 (374)
T ss_pred HHHHHHHHHHH
Confidence 99999998765
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=240.19 Aligned_cols=172 Identities=20% Similarity=0.253 Sum_probs=133.2
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++.......+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 92 ~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 170 (290)
T cd07862 92 DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 170 (290)
T ss_pred CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEcCCCCEEEccccceEeccCCccccccc
Confidence 468888885444567999999999999999999999999 999999999999999999999999998765432 2456
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC-----------ccc---cccccccC-----
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------NFL---MLMDSCLE----- 140 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-----------~~~---~~~~~~~~----- 140 (357)
||+.|+|||++.+..++.++|||||||++|||++|+.||........... .+. ......+.
T Consensus 171 ~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (290)
T cd07862 171 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQ 250 (290)
T ss_pred ccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCC
Confidence 89999999999888899999999999999999999988765421110000 000 00000000
Q ss_pred --CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 141 --GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 141 --~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....+..++.+.+++.+||+.||++|||+.++++|
T Consensus 251 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 251 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred CHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 00112356778999999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-31 Score=259.20 Aligned_cols=347 Identities=18% Similarity=0.142 Sum_probs=216.2
Q ss_pred CCCCchhhhhccC---------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccc
Q 018381 1 MPNETLSKHLFHW---------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 71 (357)
Q Consensus 1 ~~~gsL~~~l~~~---------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~ 71 (357)
++||+|.+++... ....+++..++.++.||++||.|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G-IIHRDLKPeNILLd~dg~vKLiDFGLAk~ 162 (932)
T PRK13184 84 IEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG-VLHRDLKPDNILLGLFGEVVILDWGAAIF 162 (932)
T ss_pred CCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchheEEEcCCCCEEEEecCccee
Confidence 5799999988521 1234677889999999999999999999 99999999999999999999999999875
Q ss_pred cCC----------------------CCccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC
Q 018381 72 SRD----------------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK 129 (357)
Q Consensus 72 ~~~----------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~ 129 (357)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 163 i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~ 242 (932)
T PRK13184 163 KKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYR 242 (932)
T ss_pred cccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhh
Confidence 411 0123589999999999998999999999999999999999998765321111110
Q ss_pred ccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC-CHHHHHHHhCccccccCC--Cccc-----------------
Q 018381 130 NFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP-NAKSLVASLTPLQKEAEV--PSYT----------------- 189 (357)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-s~~~v~~~l~~~~~~~~~--~~~~----------------- 189 (357)
...............++.+.+++.+||..||++|| +++++++.|+........ +...
T Consensus 243 ---~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~~~l~~~~~~~wk~~e~iLl 319 (932)
T PRK13184 243 ---DVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVKATLMTKKKSCWKFYEPILL 319 (932)
T ss_pred ---hhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccccccccccccchhccccchhhh
Confidence 11111111011124567899999999999999995 667777766554332100 0000
Q ss_pred ccCCCCCCCCCC-------------Ccc-----------------ccCccccccccc-----------------hhHHHH
Q 018381 190 LMGIPHGTASTK-------------QTI-----------------TLTPLGEACSRL-----------------DLTAIH 222 (357)
Q Consensus 190 ~~~~~~~~~~~~-------------~~~-----------------~~~~~~~~~~~~-----------------~~~~~~ 222 (357)
....+....++. .+. ..+|. ....+. ....++
T Consensus 320 sk~~~~l~~s~~~w~s~~is~ie~~~~~rie~~~~~~~~~~~~g~~l~p~-~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 398 (932)
T PRK13184 320 SKYFPMLESSPAQWYSLMISKIESSSETRLEYTVTKKGLHEGFGILLPPS-EEAERGDFYCGYGLWLHIKNNELSVSLVK 398 (932)
T ss_pred hhhcccccCCchhheeccccccccccceeeeeeeccCccccccceecCcc-cccccCccccccceeeecccccceeeeec
Confidence 000000000000 000 00000 000000 000011
Q ss_pred HHHHhhcCCCchhhHhHhhhh-----------------hh-----------------hHHHHHh--------------HH
Q 018381 223 EILEKVGYKDDEGIANELSFQ-----------------MW-----------------TDQIQET--------------LN 254 (357)
Q Consensus 223 ~il~~~~~~~~~~~~~~l~~~-----------------~~-----------------~~~~~~~--------------~~ 254 (357)
..+........ -.+....+. .| .++.+.. ..
T Consensus 399 ~~~~~~~~~~~-~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (932)
T PRK13184 399 NGLEIQKKSQE-IISQQETFAIAIEKSNHRISLFVDQTLWIIHIDYLPSRGGRIGIIIQDLQDIMSNIAIFESSGALRVS 477 (932)
T ss_pred ccceeecCCcc-cccccceeeEEEEEecchhhhhcccceEEEeeeccccCCceEEEEEecchhhccceEEEEecCceeee
Confidence 00100000000 000000000 00 0000110 01
Q ss_pred HHHhhhHHhhcCChhHHHHHHHHHhccCCC--CchHHHhhHHHHHHhc----C---ChHHHHHHHHHHHhhCCCChHHHH
Q 018381 255 SKKRGDAAFRAKDFPTAIECYTHFIDGGTM--VSPTVFARRCLCYLLS----D---MPQEALGDAMQAQVISPDWPTAFY 325 (357)
Q Consensus 255 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~--~~~~~~~~~a~~~~~~----~---~~~~A~~~~~~al~~~p~~~~a~~ 325 (357)
-..-.+++...+.|++|+..|++.-..=|. ...++.+..|..++.. | .+++|+..+++ +.-.|.-|--|.
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 556 (932)
T PRK13184 478 CLAVPDAFLAEKLYDQALIFYRRIRESFPGRKEGYEAQFRLGITLLEKASEQGDPRDFTQALSEFSY-LHGGVGAPLEYL 556 (932)
T ss_pred cccCcHHHHhhHHHHHHHHHHHHHhhcCCCcccchHHHHHhhHHHHHHHHhcCChHHHHHHHHHHHH-hcCCCCCchHHH
Confidence 133455777888999999999999987775 2445778888877654 2 47777777765 345588888899
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 326 LQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 326 ~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
..|.+|-.+|+|+|-+++|.-|++.-|+.
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (932)
T PRK13184 557 GKALVYQRLGEYNEEIKSLLLALKRYSQH 585 (932)
T ss_pred hHHHHHHHhhhHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999988764
|
|
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=244.08 Aligned_cols=160 Identities=21% Similarity=0.352 Sum_probs=127.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC------CccccCCCCCCcccc
Q 018381 17 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYL 90 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~ 90 (357)
.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....++..|+|||++
T Consensus 169 ~l~~~~~~~~~~qi~~aL~~lH~~~-ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~ 247 (337)
T cd05054 169 PLTLEDLISYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESI 247 (337)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHh
Confidence 7899999999999999999999999 999999999999999999999999999864322 223456789999999
Q ss_pred ccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCH
Q 018381 91 RTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 169 (357)
Q Consensus 91 ~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~ 169 (357)
.+..++.++|||||||++|||++ |..||.....+.. +............+...++.+.+++.+||+.+|++||++
T Consensus 248 ~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~ 323 (337)
T cd05054 248 FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE----FCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTF 323 (337)
T ss_pred cCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH----HHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCH
Confidence 99999999999999999999998 8888754211110 001111111112234456789999999999999999999
Q ss_pred HHHHHHhCcccc
Q 018381 170 KSLVASLTPLQK 181 (357)
Q Consensus 170 ~~v~~~l~~~~~ 181 (357)
.+++++|..+..
T Consensus 324 ~ell~~l~~~~~ 335 (337)
T cd05054 324 SELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHHh
Confidence 999999987643
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=234.42 Aligned_cols=173 Identities=21% Similarity=0.314 Sum_probs=139.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
+++|+|.+++.......+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 160 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccccchheEEEcCCCcEEecCCccceeccccCCCCc
Confidence 47899999996544456999999999999999999999999 999999999999999999999999998754432 2334
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
++..|+|||++.+..++.++|||||||++|+|++ |+.|+.......... .+........+..+++.+.+++.+|
T Consensus 161 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~~ 235 (256)
T cd05082 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP-----RVEKGYKMDAPDGCPPVVYDVMKQC 235 (256)
T ss_pred cceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHhcCCCCCCCCCCCHHHHHHHHHH
Confidence 5678999999988889999999999999999997 887765432222111 0111112233455678899999999
Q ss_pred ccCCCCCCCCHHHHHHHhCcc
Q 018381 159 LQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~l~~~ 179 (357)
|..+|++|||+.++++.|+.+
T Consensus 236 l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 236 WHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred hcCChhhCcCHHHHHHHHhcC
Confidence 999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=217.17 Aligned_cols=175 Identities=17% Similarity=0.229 Sum_probs=137.1
Q ss_pred CCchhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCeeeCCCCCeEEecCCcccccCCC---C
Q 018381 3 NETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---K 76 (357)
Q Consensus 3 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~ 76 (357)
.|||.+++... .+..+++.+++.|+.+|++||.+||+.. ++.||||||.|||+++.+.++|.|||.+....-. .
T Consensus 107 ~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~ 186 (302)
T KOG2345|consen 107 RGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGS 186 (302)
T ss_pred cccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeech
Confidence 58999998642 4457999999999999999999999986 5999999999999999999999999998754321 1
Q ss_pred ----------ccccCCCCCCcccccc---CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccc-cccccccCCC
Q 018381 77 ----------SYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL-MLMDSCLEGH 142 (357)
Q Consensus 77 ----------~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 142 (357)
.-..|..|+|||.+.- ...+.++|||||||++|+|+.|..||..... ++..+. ......+.-+
T Consensus 187 ~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---~GgSlaLAv~n~q~s~P 263 (302)
T KOG2345|consen 187 RQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---QGGSLALAVQNAQISIP 263 (302)
T ss_pred HHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---cCCeEEEeeeccccccC
Confidence 1245899999998853 4568899999999999999999999865421 222221 1122222222
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
-....++.+.++|..||+.||.+||++.+++..+..+.
T Consensus 264 ~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 264 NSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred CCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 23347789999999999999999999999999887653
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=242.06 Aligned_cols=166 Identities=19% Similarity=0.201 Sum_probs=136.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 100 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 176 (329)
T PTZ00263 100 VVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSKD-IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLC 176 (329)
T ss_pred CCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceec
Confidence 47899999995 4567999999999999999999999999 999999999999999999999999999865443 3457
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
||+.|+|||++.+..++.++|||||||++|+|++|..||......... ....... ..++...+..+.++|.+||
T Consensus 177 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----~~i~~~~--~~~p~~~~~~~~~li~~~L 250 (329)
T PTZ00263 177 GTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIY----EKILAGR--LKFPNWFDGRARDLVKGLL 250 (329)
T ss_pred CChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHH----HHHhcCC--cCCCCCCCHHHHHHHHHHh
Confidence 899999999999888999999999999999999999998654221111 1111111 1234446678999999999
Q ss_pred cCCCCCCCC-----HHHHHHH
Q 018381 160 QYEPRERPN-----AKSLVAS 175 (357)
Q Consensus 160 ~~~p~~Rps-----~~~v~~~ 175 (357)
+.||.+||+ +.+++.|
T Consensus 251 ~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 251 QTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred hcCHHHcCCCCCCCHHHHhcC
Confidence 999999986 7888877
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-32 Score=242.90 Aligned_cols=169 Identities=19% Similarity=0.179 Sum_probs=147.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
++||+|.+.|.++++..|+++.++.|+.|++.|+.|||++. |+|||||+.||+++.++.|||+|||+++..... .
T Consensus 86 ~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~-iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~ 164 (426)
T KOG0589|consen 86 CEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR-VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLAS 164 (426)
T ss_pred cCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhhccccCceeecchhhhhhcCCchhhhh
Confidence 57999999998767788999999999999999999999888 999999999999999999999999999977654 3
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+.+||+.||+||.+.+.+|+.++|+|||||++|||++-+.+|.......+..+..... -.+.+...+.+++.+|.
T Consensus 165 tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-----~~Plp~~ys~el~~lv~ 239 (426)
T KOG0589|consen 165 TVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-----YSPLPSMYSSELRSLVK 239 (426)
T ss_pred eecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-----CCCCCccccHHHHHHHH
Confidence 6789999999999999999999999999999999999998887654443333322222 22456677889999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
.||..+|..||++.+++.+
T Consensus 240 ~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 240 SMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHhhcCCccCCCHHHHhhC
Confidence 9999999999999999986
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=243.45 Aligned_cols=166 Identities=19% Similarity=0.289 Sum_probs=136.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 77 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 153 (323)
T cd05595 77 ANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccc
Confidence 57899999884 4568999999999999999999999999 999999999999999999999999998753221 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.++.++.++|||||||++|+|++|+.||............ ... ...++...++.+.++|.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~----~~~--~~~~p~~~~~~~~~li~ 227 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI----LME--EIRFPRTLSPEAKSLLA 227 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH----hcC--CCCCCCCCCHHHHHHHH
Confidence 356899999999999888999999999999999999999998654322211111 011 11234556788999999
Q ss_pred HhccCCCCCCC-----CHHHHHHH
Q 018381 157 RCLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rp-----s~~~v~~~ 175 (357)
+||..||++|+ ++.++++|
T Consensus 228 ~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 228 GLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HHccCCHHHhCCCCCCCHHHHHcC
Confidence 99999999998 89999886
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=255.21 Aligned_cols=169 Identities=18% Similarity=0.273 Sum_probs=138.8
Q ss_pred CCCCchhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----
Q 018381 1 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---- 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~---- 74 (357)
+++|+|.++|..+ ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 121 ~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~ 199 (496)
T PTZ00283 121 ANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-MIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSD 199 (496)
T ss_pred CCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEeCCCCEEEEecccCeeccccccc
Confidence 4789999998532 3467999999999999999999999999 99999999999999999999999999875432
Q ss_pred --CCccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 75 --GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 75 --~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............ ... .....+..+++++.
T Consensus 200 ~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~----~~~-~~~~~~~~~~~~l~ 274 (496)
T PTZ00283 200 DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKT----LAG-RYDPLPPSISPEMQ 274 (496)
T ss_pred cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH----hcC-CCCCCCCCCCHHHH
Confidence 23457899999999999888999999999999999999999998754322211111 111 11124556778899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 018381 153 RLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+++.+||..+|.+||++.+++.+
T Consensus 275 ~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 275 EIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHHHHcccChhhCcCHHHHHhC
Confidence 99999999999999999999886
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=222.63 Aligned_cols=162 Identities=21% Similarity=0.273 Sum_probs=130.6
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC---ccccCCCCCCcc
Q 018381 12 HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---SYSTNLAFTPPE 88 (357)
Q Consensus 12 ~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE 88 (357)
.+-.+++++..+=++...+++||.||-.+..|||||+||+|||+|+.|.+||||||++....++. ...|.+.|||||
T Consensus 182 krik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPE 261 (391)
T KOG0983|consen 182 KRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPE 261 (391)
T ss_pred HHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccccccCCccccCcc
Confidence 34578899999999999999999999998779999999999999999999999999987665543 456889999999
Q ss_pred cccc---CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCC
Q 018381 89 YLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRE 165 (357)
Q Consensus 89 ~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~ 165 (357)
.+.. .+|+.++||||||++++||+||+.|+.+...+...-..+....++.++ .....++.+.+++..||++|+.+
T Consensus 262 Ridp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~--~~~gFSp~F~~fv~~CL~kd~r~ 339 (391)
T KOG0983|consen 262 RIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLP--GHMGFSPDFQSFVKDCLTKDHRK 339 (391)
T ss_pred ccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCC--cccCcCHHHHHHHHHHhhcCccc
Confidence 9864 467889999999999999999999998753222111111111122222 22346789999999999999999
Q ss_pred CCCHHHHHHH
Q 018381 166 RPNAKSLVAS 175 (357)
Q Consensus 166 Rps~~~v~~~ 175 (357)
||...++++|
T Consensus 340 RP~Y~~Ll~h 349 (391)
T KOG0983|consen 340 RPKYNKLLEH 349 (391)
T ss_pred CcchHHHhcC
Confidence 9999999987
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-31 Score=240.77 Aligned_cols=175 Identities=21% Similarity=0.310 Sum_probs=136.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--Ccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~ 78 (357)
++||+|.+++. ....+++..+..++.|++.||.|||+++.|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 85 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (331)
T cd06649 85 MDGGSLDQVLK--EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (331)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence 57899999995 45679999999999999999999998644999999999999999999999999998755432 345
Q ss_pred ccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC---ccc-----------------------
Q 018381 79 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK---NFL----------------------- 132 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~---~~~----------------------- 132 (357)
.||+.|+|||++.+..++.++|||||||++|||++|+.||.......+... ...
T Consensus 163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
T cd06649 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG 242 (331)
T ss_pred CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccc
Confidence 789999999999988899999999999999999999999864322111100 000
Q ss_pred ------------cccc---cccCCCC-ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 133 ------------MLMD---SCLEGHF-SNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 133 ------------~~~~---~~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
...+ ....... ....++++.+||.+||..||++|||+.++++|..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 0000 0000011 1135678999999999999999999999999843
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-32 Score=244.89 Aligned_cols=167 Identities=21% Similarity=0.285 Sum_probs=136.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----G 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~ 75 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++.... .
T Consensus 77 ~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~-ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (325)
T cd05594 77 ANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 153 (325)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccc
Confidence 57899999884 45689999999999999999999997 78 99999999999999999999999999875322 1
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||............. .. ...++...++++.++|
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~----~~--~~~~p~~~~~~~~~li 227 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL----ME--EIRFPRTLSPEAKSLL 227 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh----cC--CCCCCCCCCHHHHHHH
Confidence 24568999999999998889999999999999999999999986543222111110 00 1123445677899999
Q ss_pred HHhccCCCCCCC-----CHHHHHHHh
Q 018381 156 SRCLQYEPRERP-----NAKSLVASL 176 (357)
Q Consensus 156 ~~cl~~~p~~Rp-----s~~~v~~~l 176 (357)
.+||..||++|+ ++.++++|-
T Consensus 228 ~~~L~~dP~~R~~~~~~~~~~il~h~ 253 (325)
T cd05594 228 SGLLKKDPKQRLGGGPDDAKEIMQHK 253 (325)
T ss_pred HHHhhcCHHHhCCCCCCCHHHHhcCC
Confidence 999999999996 899999873
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=233.50 Aligned_cols=171 Identities=19% Similarity=0.230 Sum_probs=137.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++. ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 77 AELGPLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEETN-FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 46899999994 4467999999999999999999999999 99999999999999999999999999876543221
Q ss_pred ----cccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 78 ----YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 78 ----~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
..++..|+|||++....++.++|+|||||++|||++ |..||........ ...+........+..+++++.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~l~ 228 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV-----TQMIESGERMECPQRCPPEMY 228 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHCCCCCCCCCCCCHHHH
Confidence 123578999999988888999999999999999998 8888764322111 111112222234556778999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
++|.+||+.||++||++.+|...|+..
T Consensus 229 ~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 229 DLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=242.23 Aligned_cols=166 Identities=19% Similarity=0.276 Sum_probs=135.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 78 ~~~g~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~~-ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (320)
T cd05590 78 VNGGDLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTS 154 (320)
T ss_pred CCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccc
Confidence 57899999984 4567999999999999999999999999 99999999999999999999999999875322 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||.......+.... ... ...++...+.++.++|.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i----~~~--~~~~~~~~~~~~~~li~ 228 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI----LND--EVVYPTWLSQDAVDILK 228 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH----hcC--CCCCCCCCCHHHHHHHH
Confidence 456899999999999888999999999999999999999998754322221111 111 11234456778999999
Q ss_pred HhccCCCCCCCCH------HHHHHH
Q 018381 157 RCLQYEPRERPNA------KSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~------~~v~~~ 175 (357)
+||+.||.+||++ .+++.|
T Consensus 229 ~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 229 AFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred HHcccCHHHCCCCCCCCCHHHHHcC
Confidence 9999999999998 667665
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=240.83 Aligned_cols=166 Identities=20% Similarity=0.319 Sum_probs=134.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 78 ~~gg~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~ 154 (316)
T cd05592 78 LNGGDLMFHIQ--SSGRFDEARARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAS 154 (316)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccc
Confidence 47999999984 4567999999999999999999999999 99999999999999999999999999875432 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||........... ... ....++...+.++.+++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~----i~~--~~~~~~~~~~~~~~~ll~ 228 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS----ILN--DRPHFPRWISKEAKDCLS 228 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHH----HHc--CCCCCCCCCCHHHHHHHH
Confidence 45689999999999988899999999999999999999999875432221111 000 112234556778999999
Q ss_pred HhccCCCCCCCCHH-HHHHH
Q 018381 157 RCLQYEPRERPNAK-SLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~-~v~~~ 175 (357)
+||..+|++||++. +++.+
T Consensus 229 ~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 229 KLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred HHccCCHHHcCCChHHHHcC
Confidence 99999999999875 56554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=243.96 Aligned_cols=166 Identities=17% Similarity=0.194 Sum_probs=137.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 113 ~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~ 189 (340)
T PTZ00426 113 VIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSLN-IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLC 189 (340)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceec
Confidence 57899999995 4567999999999999999999999999 999999999999999999999999999865432 3557
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
||+.|+|||++.+..++.++|+|||||++|||++|..||.......... ...... ..++...++.+.++|.+||
T Consensus 190 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~----~i~~~~--~~~p~~~~~~~~~li~~~l 263 (340)
T PTZ00426 190 GTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQ----KILEGI--IYFPKFLDNNCKHLMKKLL 263 (340)
T ss_pred CChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHH----HHhcCC--CCCCCCCCHHHHHHHHHHc
Confidence 8999999999998889999999999999999999999987543221111 111111 1234456678999999999
Q ss_pred cCCCCCCC-----CHHHHHHH
Q 018381 160 QYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 160 ~~~p~~Rp-----s~~~v~~~ 175 (357)
+.+|.+|+ ++.++++|
T Consensus 264 ~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 264 SHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ccCHHHcCCCCCCCHHHHHcC
Confidence 99999995 89999887
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=237.16 Aligned_cols=162 Identities=19% Similarity=0.218 Sum_probs=132.7
Q ss_pred CCC-CCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---------CccccCCCC
Q 018381 15 NQP-MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---------KSYSTNLAF 84 (357)
Q Consensus 15 ~~~-l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---------~~~~gt~~y 84 (357)
.++ +++.++++++++++.||+|||.++ ||||||||+|+||+++|++||+|||.+.....+ ....|||.|
T Consensus 203 d~~els~~~Ar~ylrDvv~GLEYLH~Qg-iiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF 281 (576)
T KOG0585|consen 203 DKPELSEQQARKYLRDVVLGLEYLHYQG-IIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAF 281 (576)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccc
Confidence 345 899999999999999999999999 999999999999999999999999998866332 135799999
Q ss_pred CCccccccCC----CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhcc
Q 018381 85 TPPEYLRTGR----VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 160 (357)
Q Consensus 85 ~aPE~~~~~~----~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 160 (357)
+|||...++. .+.+.||||+||+||.|+.|+.||.+... ...+.+++...+.-+..+.+.+.+++||.++|.
T Consensus 282 ~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~----~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~ 357 (576)
T KOG0585|consen 282 FAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE----LELFDKIVNDPLEFPENPEINEDLKDLIKRLLE 357 (576)
T ss_pred cchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH----HHHHHHHhcCcccCCCcccccHHHHHHHHHHhh
Confidence 9999988743 25688999999999999999999887632 222333444444333334567899999999999
Q ss_pred CCCCCCCCHHHHHHHhCcccc
Q 018381 161 YEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 161 ~~p~~Rps~~~v~~~l~~~~~ 181 (357)
+||++|.+..+|..|.+-...
T Consensus 358 KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 358 KDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred cChhheeehhhheecceeccC
Confidence 999999999999998766544
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=241.26 Aligned_cols=166 Identities=19% Similarity=0.274 Sum_probs=134.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. .++.+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 78 ~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05620 78 LNGGDLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAS 154 (316)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCcee
Confidence 47899999984 4567999999999999999999999999 99999999999999999999999999874321 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||............ .. ....++...+.++.++|.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~li~ 228 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESI--RV----DTPHYPRWITKESKDILE 228 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH--Hh----CCCCCCCCCCHHHHHHHH
Confidence 456899999999999889999999999999999999999998754322211110 00 011234446678999999
Q ss_pred HhccCCCCCCCCH-HHHHHH
Q 018381 157 RCLQYEPRERPNA-KSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~-~~v~~~ 175 (357)
+||..||++||++ .+++.|
T Consensus 229 ~~l~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 229 KLFERDPTRRLGVVGNIRGH 248 (316)
T ss_pred HHccCCHHHcCCChHHHHcC
Confidence 9999999999998 466655
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=236.24 Aligned_cols=175 Identities=15% Similarity=0.222 Sum_probs=138.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. ....+++.+++.++.||+.||.|||+++ ++||||||+|||+++++.+||+|||+++.......
T Consensus 90 ~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~ 167 (279)
T cd05109 90 MPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH 167 (279)
T ss_pred CCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCCCceeecccccceee
Confidence 578999999953 3467999999999999999999999999 99999999999999999999999999886543221
Q ss_pred ---cccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 78 ---YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 78 ---~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
..+++.|++||.+.+..++.++|||||||++|||++ |..||.......... .+........+..++..+.+
T Consensus 168 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 242 (279)
T cd05109 168 ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPD-----LLEKGERLPQPPICTIDVYM 242 (279)
T ss_pred cCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-----HHHCCCcCCCCccCCHHHHH
Confidence 234568999999988889999999999999999998 777765432211111 11111111223456778999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
++.+||..||++||++.+++..|..+...
T Consensus 243 li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 243 IMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 99999999999999999999988766443
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=241.87 Aligned_cols=163 Identities=20% Similarity=0.244 Sum_probs=139.4
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----ccc
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SYS 79 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~ 79 (357)
|+|+.+|. ..+.++++++..|+.++++||.|||+.+ |+|||+||.|||++.+|.+|+||||+++....++ +..
T Consensus 85 g~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~r-ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsik 161 (808)
T KOG0597|consen 85 GDLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNR-ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIK 161 (808)
T ss_pred hhHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcC-cccccCCcceeeecCCCceeechhhhhhhcccCceeeeecc
Confidence 68999994 6889999999999999999999999999 9999999999999999999999999999777654 346
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
|||.|||||++.+++|+..+|+||+||++||+.+|++||.....-.+...... ++ ..+|...+..+..+++-.|
T Consensus 162 GtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~---d~---v~~p~~~S~~f~nfl~gLL 235 (808)
T KOG0597|consen 162 GTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILK---DP---VKPPSTASSSFVNFLQGLL 235 (808)
T ss_pred CcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc---CC---CCCcccccHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999875432222111111 11 1235567788999999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 018381 160 QYEPRERPNAKSLVAS 175 (357)
Q Consensus 160 ~~~p~~Rps~~~v~~~ 175 (357)
.+||.+|.+..+++.|
T Consensus 236 ~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 236 IKDPAQRLTWTDLLGH 251 (808)
T ss_pred hcChhhcccHHHHhcC
Confidence 9999999999999876
|
|
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=244.35 Aligned_cols=171 Identities=20% Similarity=0.264 Sum_probs=134.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. .++.+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~ 163 (332)
T cd05614 87 VSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKLG-IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERT 163 (332)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCcc
Confidence 57899999995 4567999999999999999999999999 999999999999999999999999998754322
Q ss_pred CccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....||+.|+|||++.+. .++.++|||||||++|||++|+.||.................. ....++...+..+.++
T Consensus 164 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l 241 (332)
T cd05614 164 YSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPPFPSFIGPEAQDL 241 (332)
T ss_pred ccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCHHHHHH
Confidence 235689999999999864 4688999999999999999999988532110000000000110 1123344567889999
Q ss_pred HHHhccCCCCCCC-----CHHHHHHHh
Q 018381 155 ASRCLQYEPRERP-----NAKSLVASL 176 (357)
Q Consensus 155 i~~cl~~~p~~Rp-----s~~~v~~~l 176 (357)
+.+||..||++|| ++.+++.|-
T Consensus 242 i~~~l~~dp~~R~~~~~~~~~~~l~h~ 268 (332)
T cd05614 242 LHKLLRKDPKKRLGAGPQGASEIKEHP 268 (332)
T ss_pred HHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence 9999999999999 788888873
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=245.72 Aligned_cols=170 Identities=18% Similarity=0.293 Sum_probs=138.8
Q ss_pred CCCCchhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC-CCCCeEEecCCccccc----C
Q 018381 1 MPNETLSKHLFHWENQPM--KWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNS----R 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~----~ 73 (357)
+|||||.++|.. .=+++ .+.++-.+.+||++||.|||+.. |||||||-+||||+ -.|.+||+|||.++.. +
T Consensus 654 VPGGSLSsLLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~-IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP 731 (1226)
T KOG4279|consen 654 VPGGSLSSLLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENK-IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP 731 (1226)
T ss_pred CCCCcHHHHHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcc-eeeccccCCcEEEeeccceEEecccccchhhccCCc
Confidence 699999999964 23566 88899999999999999999999 99999999999997 5788999999998743 3
Q ss_pred CCCccccCCCCCCccccccC--CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 74 DGKSYSTNLAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 74 ~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
...++.||+.|||||++..| .|+.++|||||||++.||.||++||..-.... ..+.++.-...-+++|...+.+.
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq---AAMFkVGmyKvHP~iPeelsaea 808 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ---AAMFKVGMYKVHPPIPEELSAEA 808 (1226)
T ss_pred cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh---HhhhhhcceecCCCCcHHHHHHH
Confidence 45688999999999999875 46789999999999999999998876432111 01111111122345688889999
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 018381 152 VRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.+|.+|+..||.+||++.+++..
T Consensus 809 k~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 809 KNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHHHHHHcCCCcccCccHHHhccC
Confidence 999999999999999999999874
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-31 Score=235.24 Aligned_cols=176 Identities=23% Similarity=0.338 Sum_probs=138.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++. ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~~~l~~~~~---~~~l~~~~~~~i~~~l~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 165 (283)
T cd05080 90 VPLGSLRDYLP---KHKLNLAQLLLFAQQICEGMAYLHSQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 165 (283)
T ss_pred CCCCCHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccChheEEEcCCCcEEEeecccccccCCcchhhc
Confidence 46899999993 456999999999999999999999999 9999999999999999999999999988654322
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchh---HhhhcC-------ccccccccccCCCC
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL---DLIRGK-------NFLMLMDSCLEGHF 143 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~---~~~~~~-------~~~~~~~~~~~~~~ 143 (357)
...++..|++||++.+..++.++||||||+++|+|++|..|+..... +..... ............+.
T Consensus 166 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (283)
T cd05080 166 VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPC 245 (283)
T ss_pred cCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCC
Confidence 12345679999999888899999999999999999999988643211 101000 01111111222233
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
+..++..+.+++.+||..+|++|||+.+++..|+.+.
T Consensus 246 ~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 246 PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 4556789999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=241.57 Aligned_cols=166 Identities=19% Similarity=0.292 Sum_probs=135.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 83 ~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~ 159 (323)
T cd05616 83 VNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTK 159 (323)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccc
Confidence 57899999984 4567999999999999999999999999 99999999999999999999999999875432 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|||++|+.||........... .... ...++...+.++.+++.
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~li~ 233 (323)
T cd05616 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IMEH--NVAYPKSMSKEAVAICK 233 (323)
T ss_pred cCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHH----HHhC--CCCCCCcCCHHHHHHHH
Confidence 45689999999999999999999999999999999999999875432221111 1111 11234556788999999
Q ss_pred HhccCCCCCCCCH-----HHHHHH
Q 018381 157 RCLQYEPRERPNA-----KSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~-----~~v~~~ 175 (357)
+||+.+|.+|++. .+++.|
T Consensus 234 ~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 234 GLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred HHcccCHHhcCCCCCCCHHHHhcC
Confidence 9999999999974 566554
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=241.42 Aligned_cols=173 Identities=17% Similarity=0.136 Sum_probs=138.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC-CCccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-GKSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-~~~~~ 79 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....
T Consensus 83 ~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~ 159 (333)
T cd05600 83 VPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELG-YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVV 159 (333)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcc
Confidence 57999999994 4568999999999999999999999999 99999999999999999999999999886543 34567
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhc--CccccccccccCCCCChhhHHHHHHHHHH
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG--KNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
||+.|+|||++.+..++.++|||||||++|||++|..||.......... ...................+.++.++|.+
T Consensus 160 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~ 239 (333)
T cd05600 160 GSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITK 239 (333)
T ss_pred cCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHH
Confidence 8999999999998899999999999999999999999986543221110 00111111111101112456789999999
Q ss_pred hccCCCCCCCCHHHHHHHh
Q 018381 158 CLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 158 cl~~~p~~Rps~~~v~~~l 176 (357)
||..+|.+||++.+++.+-
T Consensus 240 ~l~~~~~rr~s~~~ll~h~ 258 (333)
T cd05600 240 LINDPSRRFGSLEDIKNHP 258 (333)
T ss_pred HhhChhhhcCCHHHHHhCc
Confidence 9999999999999999873
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-31 Score=244.76 Aligned_cols=157 Identities=20% Similarity=0.346 Sum_probs=124.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC------ccccCCCCCCcccc
Q 018381 17 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYL 90 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~ 90 (357)
.+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...++..|+|||++
T Consensus 210 ~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~ 288 (375)
T cd05104 210 ALDTEDLLSFSYQVAKGMSFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESI 288 (375)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHh
Confidence 5899999999999999999999999 9999999999999999999999999987554322 12345679999999
Q ss_pred ccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCH
Q 018381 91 RTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 169 (357)
Q Consensus 91 ~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~ 169 (357)
.+..++.++|||||||++|||++ |..||.....+. .+...+........+...+.++.+||.+||..||++|||+
T Consensus 289 ~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 364 (375)
T cd05104 289 FNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS----KFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTF 364 (375)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH----HHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCH
Confidence 98899999999999999999998 776665432111 0111111111122233456789999999999999999999
Q ss_pred HHHHHHhCc
Q 018381 170 KSLVASLTP 178 (357)
Q Consensus 170 ~~v~~~l~~ 178 (357)
.+|++.|+.
T Consensus 365 ~eil~~l~~ 373 (375)
T cd05104 365 KQIVQLIEQ 373 (375)
T ss_pred HHHHHHHHh
Confidence 999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-31 Score=235.26 Aligned_cols=176 Identities=21% Similarity=0.248 Sum_probs=139.2
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
++||+|.+++.... .+.+++.+++.++.||+.||.|||+++ ++||||||+||+++.++.+||+||
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df 167 (291)
T cd05094 89 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVGANLLVKIGDF 167 (291)
T ss_pred CCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEECCC
Confidence 47899999995321 245899999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++..... ....++..|+|||++.+..++.++|||||||++|+|++ |..|+.......... ......
T Consensus 168 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-----~~~~~~ 242 (291)
T cd05094 168 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE-----CITQGR 242 (291)
T ss_pred CcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHhCCC
Confidence 998754332 22345778999999998889999999999999999998 888765432221111 011111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
....+..++..+.+++.+||..+|++||++.++++.|..+...
T Consensus 243 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 243 VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1122334567899999999999999999999999999887553
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=232.44 Aligned_cols=172 Identities=21% Similarity=0.279 Sum_probs=138.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++.......+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR 161 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEecCCCcEEECCCccceecCCCceecc
Confidence 47899999996555677999999999999999999999999 9999999999999999999999999998654322
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|+|||++.++.++.++|+|||||++|+|++ |..||........... +. .....+....++..+.++
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~l 236 (261)
T cd05072 162 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSA-LQ----RGYRMPRMENCPDELYDI 236 (261)
T ss_pred CCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHH-HH----cCCCCCCCCCCCHHHHHH
Confidence 2234678999999988888999999999999999998 8877764322211111 01 111112233466789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
+.+||..+|++||++.++.+.|+.
T Consensus 237 i~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 237 MKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHHccCCcccCcCHHHHHHHHhc
Confidence 999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-31 Score=223.23 Aligned_cols=169 Identities=21% Similarity=0.257 Sum_probs=132.5
Q ss_pred chhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccccc
Q 018381 5 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYST 80 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~g 80 (357)
+|..++. .-+.+|...++.-+..|+++|+.|||... |+||||||+|+|+++.|.+||+|||+|+.++.. +..+.
T Consensus 162 DLksl~d-~m~q~F~~~evK~L~~QlL~glk~lH~~w-ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVV 239 (419)
T KOG0663|consen 162 DLKSLME-TMKQPFLPGEVKTLMLQLLRGLKHLHDNW-ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVV 239 (419)
T ss_pred hHHHHHH-hccCCCchHHHHHHHHHHHHHHHHHhhce-eEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEE
Confidence 3455552 24578999999999999999999999999 999999999999999999999999999987754 34567
Q ss_pred CCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchh-H---------------hhhc---------Cccccc
Q 018381 81 NLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL-D---------------LIRG---------KNFLML 134 (357)
Q Consensus 81 t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-~---------------~~~~---------~~~~~~ 134 (357)
|++|.|||.+.+ ..|+...||||+|||+.||+++++.|++... + .+.+ ..+...
T Consensus 240 TLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~ 319 (419)
T KOG0663|consen 240 TLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEH 319 (419)
T ss_pred EeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCC
Confidence 999999999988 4578999999999999999999988876410 0 0000 011111
Q ss_pred cccccCCCCChh-hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 135 MDSCLEGHFSND-DGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 135 ~~~~~~~~~~~~-~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....++..|+.. .++...+|+..+|.+||.+|.|+.+.++|
T Consensus 320 pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 320 PYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred CchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 111222223222 56788999999999999999999999998
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=231.85 Aligned_cols=172 Identities=18% Similarity=0.250 Sum_probs=138.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. ....+++.++++++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.......
T Consensus 76 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 76 ASGGPLNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKN-FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred CCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcC-eeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 478999999953 4567999999999999999999999999 99999999999999999999999999875433221
Q ss_pred ----cccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 78 ----YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 78 ----~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
..++..|+|||++.+..++.++|||||||++|++++ |..||........ ...+........+..+++++.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~ 228 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV-----MSFIEQGKRLDCPAECPPEMY 228 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH-----HHHHHCCCCCCCCCCCCHHHH
Confidence 122568999999988889999999999999999996 8888764322111 111111122334556778999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
++|.+||..+|++||++.+|.+.|+.+
T Consensus 229 ~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 229 ALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=236.05 Aligned_cols=172 Identities=19% Similarity=0.293 Sum_probs=136.0
Q ss_pred CCCCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---
Q 018381 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 75 (357)
++||+|.+++.. .....+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 75 ~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 153 (280)
T cd05608 75 MNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR-IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK 153 (280)
T ss_pred CCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc
Confidence 578999988743 23467999999999999999999999999 999999999999999999999999998755432
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||................... ...++...+..+.++
T Consensus 154 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 231 (280)
T cd05608 154 TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSF 231 (280)
T ss_pred ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHH
Confidence 23468999999999999999999999999999999999999886432110000000011111 112344567889999
Q ss_pred HHHhccCCCCCCC-----CHHHHHHH
Q 018381 155 ASRCLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rp-----s~~~v~~~ 175 (357)
+.+||+.||++|| ++.+++.|
T Consensus 232 i~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 232 CEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred HHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999999 77888876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=230.79 Aligned_cols=170 Identities=25% Similarity=0.300 Sum_probs=134.7
Q ss_pred chhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC-CCeEEecCCcccccCCC---Ccc
Q 018381 5 TLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSRDG---KSY 78 (357)
Q Consensus 5 sL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~---~~~ 78 (357)
||.+++.. ..+..++.-.+.-+..||.+||.|||+.+ |+||||||+|+|+|.+ |.+||||||.|+....+ .++
T Consensus 107 tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~-IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSY 185 (364)
T KOG0658|consen 107 TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG-ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISY 185 (364)
T ss_pred HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC-cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeE
Confidence 56677742 24678888999999999999999999998 9999999999999975 89999999999966544 466
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcch----------------hHhhhcCcc-------ccc
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHA----------------LDLIRGKNF-------LML 134 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~----------------~~~~~~~~~-------~~~ 134 (357)
..|..|+|||.+.+ ..|+.+.||||.||++.||+-|+..|++.. .+.+...+. .+.
T Consensus 186 icSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~i 265 (364)
T KOG0658|consen 186 ICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQI 265 (364)
T ss_pred EEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCccc
Confidence 78999999999988 568999999999999999999999888751 111111111 111
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 135 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....+..-+....+++..+|+.++|+++|.+|.++.+++.|
T Consensus 266 k~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 266 KAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred ccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 11111112344578899999999999999999999999986
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=251.58 Aligned_cols=169 Identities=20% Similarity=0.243 Sum_probs=136.9
Q ss_pred CCCCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---
Q 018381 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 75 (357)
++||+|.+++.. ....++++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK-MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 579999998853 23457999999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 76 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||.......+... ..... ....+..++..+.
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~----~~~~~-~~~~~~~~s~~~~ 300 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQ----VLYGK-YDPFPCPVSSGMK 300 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhCC-CCCCCccCCHHHH
Confidence 244689999999999988899999999999999999999999865422211111 11111 1123445667899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 018381 153 RLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
++|.+||..+|++||++.+++.+
T Consensus 301 ~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 301 ALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHHHHhccChhhCcCHHHHHhC
Confidence 99999999999999999999764
|
|
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=240.23 Aligned_cols=166 Identities=17% Similarity=0.244 Sum_probs=135.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 78 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05591 78 VNGGDLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT 154 (321)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeecccceecccCCcccc
Confidence 47899999984 4567999999999999999999999999 99999999999999999999999999875332 22
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||........... ..... ..++...+.++.+++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~----i~~~~--~~~p~~~~~~~~~ll~ 228 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFES----ILHDD--VLYPVWLSKEAVSILK 228 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHH----HHcCC--CCCCCCCCHHHHHHHH
Confidence 45689999999999988899999999999999999999999875432221111 11111 1234445678999999
Q ss_pred HhccCCCCCCC-------CHHHHHHH
Q 018381 157 RCLQYEPRERP-------NAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rp-------s~~~v~~~ 175 (357)
+||+.||++|| ++.+++.+
T Consensus 229 ~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 229 AFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 99999999999 88888876
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-31 Score=239.36 Aligned_cols=166 Identities=20% Similarity=0.260 Sum_probs=136.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 47899999994 4567899999999999999999999999 999999999999999999999999998743322 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...... ....+...++.+.++|.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~li~ 232 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTI----DKILKG--KLNLPPYLTPEARDLLK 232 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHH----HHHHcC--CCCCCCCCCHHHHHHHH
Confidence 346899999999999888899999999999999999999988654322111 111111 11234556788999999
Q ss_pred HhccCCCCCCC-----CHHHHHHH
Q 018381 157 RCLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rp-----s~~~v~~~ 175 (357)
+||..+|++|| ++.+++.+
T Consensus 233 ~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 233 KLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred HHcccCHhHcCCCCCCCHHHHhcC
Confidence 99999999999 89998886
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-31 Score=240.33 Aligned_cols=166 Identities=20% Similarity=0.299 Sum_probs=134.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 83 ~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05587 83 VNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTR 159 (324)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCcee
Confidence 47899999994 4567999999999999999999999999 99999999999999999999999999874321 12
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||........... ... ....++...+..+.+++.
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~----i~~--~~~~~~~~~~~~~~~li~ 233 (324)
T cd05587 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQS----IME--HNVSYPKSLSKEAVSICK 233 (324)
T ss_pred eecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH----HHc--CCCCCCCCCCHHHHHHHH
Confidence 45689999999999988899999999999999999999998865432211111 111 112234456778999999
Q ss_pred HhccCCCCCCCCH-----HHHHHH
Q 018381 157 RCLQYEPRERPNA-----KSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~-----~~v~~~ 175 (357)
+||..+|.+|++. .++++|
T Consensus 234 ~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 234 GLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcC
Confidence 9999999999976 666665
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-31 Score=232.76 Aligned_cols=173 Identities=23% Similarity=0.261 Sum_probs=136.1
Q ss_pred CCCCchhhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC
Q 018381 1 MPNETLSKHLFH----WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~----~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 76 (357)
+++|+|.+++.. .....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 88 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (272)
T cd05075 88 MKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS-FIHRDLAARNCMLNENMNVCVADFGLSKKIYNGD 166 (272)
T ss_pred CCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhheEEcCCCCEEECCCCcccccCccc
Confidence 468999988742 12346899999999999999999999999 9999999999999999999999999988654322
Q ss_pred ------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHH
Q 018381 77 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 149 (357)
Q Consensus 77 ------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
...+++.|++||++.+..++.++|+|||||++|+|++ |..||......... ..+........+..++.
T Consensus 167 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 241 (272)
T cd05075 167 YYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIY-----DYLRQGNRLKQPPDCLD 241 (272)
T ss_pred ceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCH
Confidence 2235678999999998889999999999999999999 67776543221111 11111111123445677
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
.+.++|.+||..+|++|||+.++++.|+.+
T Consensus 242 ~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 242 GLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-31 Score=233.14 Aligned_cols=172 Identities=19% Similarity=0.240 Sum_probs=137.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+|++|||.+.......
T Consensus 88 ~~~~~L~~~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~~-iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 165 (266)
T cd05064 88 MSNGALDSFLRK-HEGQLVAGQLMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTT 165 (266)
T ss_pred CCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeeccccHhhEEEcCCCcEEECCCcccccccccchhcc
Confidence 478999999953 3467999999999999999999999999 9999999999999999999999999876443221
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|+|||++.++.++.++|||||||++||+++ |..||......... ..+......+.+..++..+.++
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l 240 (266)
T cd05064 166 MSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVI-----KAVEDGFRLPAPRNCPNLLHQL 240 (266)
T ss_pred cCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHH-----HHHHCCCCCCCCCCCCHHHHHH
Confidence 2234678999999998899999999999999999775 88887654222111 1111111223355677889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
+.+||..+|.+||++.+|++.|..+
T Consensus 241 i~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 241 MLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHcCCCchhCCCHHHHHHHHHhh
Confidence 9999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=241.48 Aligned_cols=170 Identities=15% Similarity=0.280 Sum_probs=134.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC----CCC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++... ...
T Consensus 78 ~~~g~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (329)
T cd05588 78 VSGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTS 154 (329)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEECcCccccccccCCCccc
Confidence 57999999884 4568999999999999999999999999 9999999999999999999999999987422 123
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC-----ccccccccccCCCCChhhHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----NFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
...||+.|+|||++.+..++.++|+|||||++|+|++|+.||........... ......... ...+..++..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~ 232 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ--IRIPRSLSVKA 232 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC--CCCCCCCCHHH
Confidence 45789999999999998899999999999999999999998853211000000 000111111 12345567789
Q ss_pred HHHHHHhccCCCCCCCC------HHHHHHH
Q 018381 152 VRLASRCLQYEPRERPN------AKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps------~~~v~~~ 175 (357)
.++|.+||..||.+|++ +.+++.|
T Consensus 233 ~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 233 SSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 99999999999999987 6788776
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-31 Score=235.80 Aligned_cols=176 Identities=22% Similarity=0.242 Sum_probs=132.9
Q ss_pred CCCCchhhhhccCC-----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEE
Q 018381 1 MPNETLSKHLFHWE-----------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRL 63 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl 63 (357)
+++|+|.+++.... ...+++.++++++.||+.||.|||+.+ |+||||||+|||++.++.+||
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl 179 (304)
T cd05096 101 MENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATRNCLVGENLTIKI 179 (304)
T ss_pred CCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccCcchhheEEcCCccEEE
Confidence 47899999884321 135788999999999999999999999 999999999999999999999
Q ss_pred ecCCcccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCC--CCCCcchhHhhhcCc--ccc
Q 018381 64 SCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK--HIPPSHALDLIRGKN--FLM 133 (357)
Q Consensus 64 ~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~--~~~~~~~~~~~~~~~--~~~ 133 (357)
+|||+++...... ...++..|+|||++.++.++.++|||||||++|+|+++. .|+............ ...
T Consensus 180 ~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~ 259 (304)
T cd05096 180 ADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFR 259 (304)
T ss_pred CCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhh
Confidence 9999987543322 234577899999998888999999999999999999754 444432211111000 000
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 134 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
..........++.++..+.++|.+||..+|.+|||+.+|.+.|+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 260 DQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred hccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 00011111224456788999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-31 Score=240.21 Aligned_cols=166 Identities=22% Similarity=0.248 Sum_probs=134.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 78 ~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~g-ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (323)
T cd05575 78 VNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTS 154 (323)
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccc
Confidence 47899999995 4568999999999999999999999999 99999999999999999999999999875322 22
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.......+... ..... ...+...+..+.++|.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~----i~~~~--~~~~~~~~~~~~~li~ 228 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDN----ILNKP--LRLKPNISVSARHLLE 228 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHH----HHcCC--CCCCCCCCHHHHHHHH
Confidence 34689999999999998899999999999999999999999875432221111 11111 1223445778999999
Q ss_pred HhccCCCCCCCCHH----HHHHH
Q 018381 157 RCLQYEPRERPNAK----SLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~----~v~~~ 175 (357)
+||+.||.+||++. +++.+
T Consensus 229 ~~l~~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 229 GLLQKDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred HHhhcCHHhCCCCCCCHHHHHcC
Confidence 99999999999874 66554
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=241.45 Aligned_cols=170 Identities=16% Similarity=0.282 Sum_probs=134.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.... ..
T Consensus 78 ~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (329)
T cd05618 78 VNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 154 (329)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccc
Confidence 57899999884 4568999999999999999999999999 99999999999999999999999999875322 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc----c-ccccccccCCCCChhhHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN----F-LMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~ 151 (357)
...||+.|+|||++.+..++.++|+|||||++|+|++|+.||............ . ...... ...++...+..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~~~~~ 232 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKA 232 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC--CCCCCCCCCHHH
Confidence 456899999999999988999999999999999999999987521100000000 0 001111 112455667889
Q ss_pred HHHHHHhccCCCCCCCC------HHHHHHH
Q 018381 152 VRLASRCLQYEPRERPN------AKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps------~~~v~~~ 175 (357)
.++|.+||+.||++||+ +.+++.|
T Consensus 233 ~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 233 ASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 99999999999999998 4677766
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=235.32 Aligned_cols=174 Identities=22% Similarity=0.306 Sum_probs=138.4
Q ss_pred CCCCchhhhhcc--------------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFH--------------WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~--------------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
+++|+|.+++.. .....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 98 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~Nil~~~~~~~kL~Df 176 (293)
T cd05053 98 AAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK-CIHRDLAARNVLVTEDHVMKIADF 176 (293)
T ss_pred CCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-ccccccceeeEEEcCCCeEEeCcc
Confidence 468999999853 23467999999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...++..|+|||++.+..++.++|||||||++|+|++ |..|+......... .......
T Consensus 177 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~~~~~~~ 251 (293)
T cd05053 177 GLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-----KLLKEGY 251 (293)
T ss_pred ccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH-----HHHHcCC
Confidence 9988654322 1234567999999988889999999999999999997 87776654222111 1111111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
....+..++..+.+++.+||..+|++|||+.++++.|+.+.
T Consensus 252 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 252 RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 22334456778999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=238.75 Aligned_cols=166 Identities=20% Similarity=0.277 Sum_probs=134.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ....+++.++..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 78 ~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05619 78 LNGGDLMFHIQ--SCHKFDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC 154 (316)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCcee
Confidence 47899999994 4567999999999999999999999999 99999999999999999999999999874322 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||........... .... ...++...+..+.+++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~--i~~~----~~~~~~~~~~~~~~li~ 228 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS--IRMD----NPCYPRWLTREAKDILV 228 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHH--HHhC----CCCCCccCCHHHHHHHH
Confidence 45689999999999988899999999999999999999998865432211110 0001 11233446678999999
Q ss_pred HhccCCCCCCCCHH-HHHHH
Q 018381 157 RCLQYEPRERPNAK-SLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~-~v~~~ 175 (357)
+||..+|++||++. +++.+
T Consensus 229 ~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 229 KLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred HHhccCHhhcCCChHHHHcC
Confidence 99999999999997 66654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=251.81 Aligned_cols=176 Identities=23% Similarity=0.327 Sum_probs=146.6
Q ss_pred CCCCchhhhhccC--------CC----CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCc
Q 018381 1 MPNETLSKHLFHW--------EN----QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 68 (357)
Q Consensus 1 ~~~gsL~~~l~~~--------~~----~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 68 (357)
|.+|+|.+||.-. .+ .+|+..+.+.|+.||+.||.||.+.. +|||||-.+|+||+++..|||+|||+
T Consensus 571 m~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~-FVHRDLATRNCLVge~l~VKIsDfGL 649 (774)
T KOG1026|consen 571 MDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH-FVHRDLATRNCLVGENLVVKISDFGL 649 (774)
T ss_pred cccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc-ccccchhhhhceeccceEEEeccccc
Confidence 6789999999631 12 23899999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCc------cccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCC
Q 018381 69 MKNSRDGKS------YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEG 141 (357)
Q Consensus 69 ~~~~~~~~~------~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
+|..-.... ..-.+.|||||.+..+++|.+||||||||+|||+++ |+.|+.+. .+..+++.+......
T Consensus 650 sRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~gl-----Sn~EVIe~i~~g~lL 724 (774)
T KOG1026|consen 650 SRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGL-----SNQEVIECIRAGQLL 724 (774)
T ss_pred chhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccccc-----chHHHHHHHHcCCcc
Confidence 985433221 122578999999999999999999999999999987 66676653 333444444444445
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 142 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 142 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
+.|.+||.++.+||..||+..|.+||++++|...|+.....
T Consensus 725 ~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 725 SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 67889999999999999999999999999999998876554
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-31 Score=242.38 Aligned_cols=170 Identities=25% Similarity=0.260 Sum_probs=135.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 83 ~~~~~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (350)
T cd05573 83 MPGGDLMNLLI--RKDVFPEETARFYIAELVLALDSVHKLG-FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREY 159 (350)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccc
Confidence 47899999995 3378999999999999999999999999 9999999999999999999999999987544322
Q ss_pred -----------------------------ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhh
Q 018381 77 -----------------------------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR 127 (357)
Q Consensus 77 -----------------------------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~ 127 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~ 239 (350)
T cd05573 160 YLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETY 239 (350)
T ss_pred cccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHH
Confidence 346899999999999989999999999999999999999998764322111
Q ss_pred cCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC-HHHHHHHh
Q 018381 128 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN-AKSLVASL 176 (357)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps-~~~v~~~l 176 (357)
.. +... ......+.....++.+.++|.+||. +|.+||+ +.+++.|.
T Consensus 240 ~~-i~~~-~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp 286 (350)
T cd05573 240 NK-IINW-KESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHP 286 (350)
T ss_pred HH-Hhcc-CCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCC
Confidence 11 0000 0111111122257889999999997 9999999 99999873
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-31 Score=233.68 Aligned_cols=173 Identities=16% Similarity=0.237 Sum_probs=134.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC---c
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---S 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~ 77 (357)
++||+|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++....... .
T Consensus 75 ~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~ 153 (277)
T cd05607 75 MNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD-IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQ 153 (277)
T ss_pred CCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeec
Confidence 47899999886545567999999999999999999999999 9999999999999999999999999987654432 3
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
..|+..|+|||++.+..++.++|||||||++|+|++|+.||....................... .....+.++.+++.+
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~ 232 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF-EHQNFTEESKDICRL 232 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc-ccccCCHHHHHHHHH
Confidence 4688999999999988899999999999999999999998764321110000001111111110 112456789999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 018381 158 CLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rps~~~v~~~ 175 (357)
||+.||.+||++.++++.
T Consensus 233 ~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 233 FLAKKPEDRLGSREKNDD 250 (277)
T ss_pred HhccCHhhCCCCccchhh
Confidence 999999999999665543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=239.07 Aligned_cols=166 Identities=17% Similarity=0.282 Sum_probs=136.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++.... ..
T Consensus 78 ~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (318)
T cd05570 78 VNGGDLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS 154 (318)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccc
Confidence 47899999884 4568999999999999999999999999 99999999999999999999999999874322 12
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|+|||||++|+|++|+.||........... .... ...++...+..+.++|.
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~----i~~~--~~~~~~~~~~~~~~li~ 228 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQS----ILED--EVRYPRWLSKEAKSILK 228 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHH----HHcC--CCCCCCcCCHHHHHHHH
Confidence 34689999999999998999999999999999999999999865432222111 0111 11234456778999999
Q ss_pred HhccCCCCCCCCH-----HHHHHH
Q 018381 157 RCLQYEPRERPNA-----KSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~-----~~v~~~ 175 (357)
+||..||++||++ .+++.+
T Consensus 229 ~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 229 SFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HHccCCHHHcCCCCCCCHHHHhcC
Confidence 9999999999999 888876
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-32 Score=237.51 Aligned_cols=170 Identities=26% Similarity=0.440 Sum_probs=132.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.++|.......+++.+++.|+.||++||.|||+++ ++|++|+++||+++.++.+||+|||+++.....
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~ 161 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN-IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN 161 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 47899999997655688999999999999999999999999 999999999999999999999999998866322
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
........|+|||++.+..++.++||||||+++|||++ |+.|+.......+ ...+........+..++..+.+
T Consensus 162 ~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 236 (259)
T PF07714_consen 162 DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEI-----IEKLKQGQRLPIPDNCPKDIYS 236 (259)
T ss_dssp STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHH-----HHHHHTTEETTSBTTSBHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccceeccchhHHHHH
Confidence 22345678999999998889999999999999999999 5666554322111 1111122223345567788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 018381 154 LASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l 176 (357)
+|.+||..+|++|||+.++++.|
T Consensus 237 li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 237 LIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHHhcC
Confidence 99999999999999999999875
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-31 Score=238.12 Aligned_cols=165 Identities=19% Similarity=0.318 Sum_probs=134.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|..++ ..+.+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.... ..
T Consensus 84 ~~~~~L~~~~---~~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05589 84 AAGGDLMMHI---HTDVFSEPRAVFYAACVVLGLQYLHENK-IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTS 159 (324)
T ss_pred CCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCccc
Confidence 4789999888 4567999999999999999999999999 99999999999999999999999999875322 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|+|||||++|+|++|+.||........... .... ...++...+..+.++|.
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~li~ 233 (324)
T cd05589 160 TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDS----IVND--EVRYPRFLSREAISIMR 233 (324)
T ss_pred ccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhC--CCCCCCCCCHHHHHHHH
Confidence 45689999999999988899999999999999999999999875432211111 1111 11234456788999999
Q ss_pred HhccCCCCCCC-----CHHHHHHH
Q 018381 157 RCLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rp-----s~~~v~~~ 175 (357)
+||+.||.+|| ++.+++++
T Consensus 234 ~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 234 RLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred HHhhcCHhHcCCCCCCCHHHHhhC
Confidence 99999999999 57777776
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-31 Score=230.54 Aligned_cols=172 Identities=23% Similarity=0.311 Sum_probs=139.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++....+..+++.++..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~ 162 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSS 162 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccCcceEEEcCCceEEEccccchhhcCCcccccc
Confidence 47899999997655678999999999999999999999999 9999999999999999999999999987654321
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
...++..|++||++.+..++.++|+||||+++|+|++ |+.|+......... ...........+..+++.+.++|
T Consensus 163 ~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i 237 (261)
T cd05148 163 DKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVY-----DQITAGYRMPCPAKCPQEIYKIM 237 (261)
T ss_pred CCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHH-----HHHHhCCcCCCCCCCCHHHHHHH
Confidence 2235678999999988889999999999999999998 77777543211111 11111222234456678899999
Q ss_pred HHhccCCCCCCCCHHHHHHHhCc
Q 018381 156 SRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
.+||..+|.+|||+.++++.|+.
T Consensus 238 ~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 238 LECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred HHHcCCCchhCcCHHHHHHHHhc
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-31 Score=249.25 Aligned_cols=173 Identities=17% Similarity=0.169 Sum_probs=140.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCeeeCCCCCeEEecCCcccccCCCC---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 76 (357)
|+||+|-|++..+-...|++.++++|+.|+++|+.+||... ||||||||-+||||+.+|..||||||.+.......
T Consensus 124 C~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~ 203 (738)
T KOG1989|consen 124 CKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSA 203 (738)
T ss_pred ccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccH
Confidence 57899999996544556999999999999999999999976 69999999999999999999999999986432221
Q ss_pred ----------ccccCCCCCCcccc---ccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCC
Q 018381 77 ----------SYSTNLAFTPPEYL---RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 143 (357)
Q Consensus 77 ----------~~~gt~~y~aPE~~---~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
....|+.|++||++ .+.+.++|+|||+|||+||.|+....||..... ..++...+.-+.
T Consensus 204 ~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--------laIlng~Y~~P~ 275 (738)
T KOG1989|consen 204 QEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--------LAILNGNYSFPP 275 (738)
T ss_pred HHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--------eeEEeccccCCC
Confidence 12468999999987 456789999999999999999999999865321 223333333333
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
.+..+..+.+||..||+.+|++||++.+|+..+..+..
T Consensus 276 ~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 276 FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 35688999999999999999999999999998755433
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=229.80 Aligned_cols=172 Identities=24% Similarity=0.307 Sum_probs=137.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.......+++.+++.++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05070 82 MSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN-YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEEeCCceEEeCCceeeeeccCcccccc
Confidence 46899999996444567999999999999999999999999 9999999999999999999999999987554322
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|+|||++.+..++.++|+||||+++|+|++ |..||......... .........+.+...+..+.++
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l 235 (260)
T cd05070 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL-----EQVERGYRMPCPQDCPISLHEL 235 (260)
T ss_pred cCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH-----HHHHcCCCCCCCCcCCHHHHHH
Confidence 2234568999999988889999999999999999999 77776543221111 1111112223344567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
+.+||..+|++|||+.++.+.|+.
T Consensus 236 i~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 236 MLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHcccCcccCcCHHHHHHHHhc
Confidence 999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=229.56 Aligned_cols=172 Identities=23% Similarity=0.298 Sum_probs=138.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05069 82 MGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN-YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCeEEECCCccceEccCCccccc
Confidence 46889999996544556899999999999999999999999 9999999999999999999999999987553322
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|+|||+..+..++.++|+||||+++|+|++ |..||........... .........+...+..+.++
T Consensus 161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l 235 (260)
T cd05069 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQ-----VERGYRMPCPQGCPESLHEL 235 (260)
T ss_pred CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHcCCCCCCCcccCHHHHHH
Confidence 2245678999999988889999999999999999999 7777765422211110 11111222344567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
+.+||..+|++||++.++++.|+.
T Consensus 236 i~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 236 MKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHccCCcccCcCHHHHHHHHhc
Confidence 999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=228.94 Aligned_cols=169 Identities=22% Similarity=0.333 Sum_probs=133.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC--------eEEecCCccccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN--------PRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~--------~kl~Dfg~~~~~ 72 (357)
+++|+|.+++.. .+..+++..++.++.||+.||.|||+++ |+||||||+||+++.++. ++++|||++...
T Consensus 81 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 81 VKFGSLDTYLKK-NKNLINISWKLEVAKQLAWALHFLEDKG-LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred CCCCcHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 478999999953 3457999999999999999999999999 999999999999987765 699999998876
Q ss_pred CCCCccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 73 RDGKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 73 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|..++........ .. ..... ....+...+.++
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~-~~---~~~~~--~~~~~~~~~~~~ 232 (258)
T cd05078 159 LPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK-KL---QFYED--RHQLPAPKWTEL 232 (258)
T ss_pred CCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH-HH---HHHHc--cccCCCCCcHHH
Confidence 66666778999999999986 4578899999999999999999654432211110 00 00011 112344455789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 152 VRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
.+++.+||+.+|++|||+.++++.|.
T Consensus 233 ~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 233 ANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHHHhccChhhCCCHHHHHHhcC
Confidence 99999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=229.07 Aligned_cols=171 Identities=20% Similarity=0.280 Sum_probs=137.2
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC--ccc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--SYS 79 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~ 79 (357)
++|+|.+++....+..+++.++..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN-YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEARE 162 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccC
Confidence 6899999996444467999999999999999999999999 9999999999999999999999999988654321 112
Q ss_pred ---cCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 80 ---TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 80 ---gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
.+..|+|||++.+..++.++|+||||+++|+|++ |+.||.......... .+........+..++..+.+++
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li 237 (261)
T cd05068 163 GAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQ-----QVDQGYRMPCPPGCPKELYDIM 237 (261)
T ss_pred CCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-----HHHcCCCCCCCCcCCHHHHHHH
Confidence 2357999999998889999999999999999999 887775532221111 1111111223445678899999
Q ss_pred HHhccCCCCCCCCHHHHHHHhCc
Q 018381 156 SRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
.+||..+|++||++.++...|+.
T Consensus 238 ~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 238 LDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHHhhcCcccCCCHHHHHHHHhc
Confidence 99999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=230.02 Aligned_cols=173 Identities=24% Similarity=0.290 Sum_probs=138.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++....+..+++.++..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||.++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~ 160 (262)
T cd05071 82 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 160 (262)
T ss_pred CCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcccEEEcCCCcEEeccCCceeeccccccccc
Confidence 47899999996444567899999999999999999999999 9999999999999999999999999987554322
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|++||+..+..++.++|+|||||++|+|++ |..||.......... ..........+...+..+.++
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~l 235 (262)
T cd05071 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-----QVERGYRMPCPPECPESLHDL 235 (262)
T ss_pred cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHH-----HHhcCCCCCCccccCHHHHHH
Confidence 2235678999999988889999999999999999999 666665432221111 111111122344567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
+.+||+.+|++||++.++++.|+..
T Consensus 236 i~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 236 MCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHHccCCcccCCCHHHHHHHHHHh
Confidence 9999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-31 Score=230.49 Aligned_cols=174 Identities=20% Similarity=0.264 Sum_probs=133.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 79 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 79 MKHGDLRNFIRS-ETHNPTVKDLIGFGLQVAKGMEYLASKK-FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 468999999953 3456788899999999999999999999 999999999999999999999999998754321
Q ss_pred ---CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 76 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
....++..|+|||++.+..++.++|||||||++|||++|..|+....... .....+........+...+..+.
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 232 (262)
T cd05058 157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF----DITVYLLQGRRLLQPEYCPDPLY 232 (262)
T ss_pred cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHhcCCCCCCCCcCCHHHH
Confidence 12234678999999988889999999999999999999655543221110 00111111111122334567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
+++.+||..+|++||++.+++..|+.+.
T Consensus 233 ~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 233 EVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 9999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=230.51 Aligned_cols=172 Identities=22% Similarity=0.284 Sum_probs=138.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ..+.+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 87 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (266)
T cd05033 87 MENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYT 164 (266)
T ss_pred CCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCCEEECccchhhccccccccee
Confidence 468999999953 4458999999999999999999999999 9999999999999999999999999998664211
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...+++.|+|||.+.+..++.++||||||+++|+|++ |..||......... .........+.+..+++.+.+
T Consensus 165 ~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~ 239 (266)
T cd05033 165 TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVI-----KAVEDGYRLPPPMDCPSALYQ 239 (266)
T ss_pred ccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHHH
Confidence 1234578999999998889999999999999999998 88777543222211 111111122234456788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
++.+||+.+|++||++.+++++|..+
T Consensus 240 li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 240 LMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=229.53 Aligned_cols=172 Identities=21% Similarity=0.305 Sum_probs=137.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCcc--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY-- 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-- 78 (357)
+++|+|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++........
T Consensus 77 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 77 APLGPLLKYLK--KRREIPVSDLKELAHQVAMGMAYLESKH-FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CCCCcHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHhhcC-eeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 46899999995 3447999999999999999999999999 999999999999999999999999998755433211
Q ss_pred -----ccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 79 -----STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 79 -----~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
.++..|+|||++.+..++.++|||||||++|+|++ |..||........ ...+........+..++..+.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~ 228 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEV-----IAMLESGERLPRPEECPQEIY 228 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHH-----HHHHHcCCcCCCCCCCCHHHH
Confidence 22467999999998889999999999999999998 8877654321111 111111112234455678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
++|.+||..+|++||++.++++.|+.+.
T Consensus 229 ~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 229 SIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 9999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=234.46 Aligned_cols=176 Identities=19% Similarity=0.225 Sum_probs=137.8
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
+++|+|.+++.... ...+++.+++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+||
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~df 163 (297)
T cd05089 85 APYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ-FIHRDLAARNVLVGENLASKIADF 163 (297)
T ss_pred cCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCcCCcceEEECCCCeEEECCc
Confidence 47899999995321 135899999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCC---CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCC
Q 018381 67 GLMKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGH 142 (357)
Q Consensus 67 g~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
|++...... .....+..|+|||++.+..++.++|||||||++|||++ |..||.......... .........
T Consensus 164 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~-----~~~~~~~~~ 238 (297)
T cd05089 164 GLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYE-----KLPQGYRME 238 (297)
T ss_pred CCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-----HHhcCCCCC
Confidence 998643321 11223457999999988889999999999999999997 888876543222111 111112222
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+..++..+.+|+.+||..+|.+|||+.+++..|..+...
T Consensus 239 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 239 KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 3445678899999999999999999999999998776654
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=240.15 Aligned_cols=170 Identities=16% Similarity=0.264 Sum_probs=133.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 78 ~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (327)
T cd05617 78 VNGGDLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS 154 (327)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCcee
Confidence 57999999884 4567999999999999999999999999 99999999999999999999999999875321 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhh-hc--CccccccccccCCCCChhhHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-RG--KNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||........ .. ......... ...++...+..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~ 232 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--PIRIPRFLSVKASH 232 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--CCCCCCCCCHHHHH
Confidence 45789999999999988999999999999999999999998853211000 00 000111111 11244556778999
Q ss_pred HHHHhccCCCCCCCCH------HHHHHH
Q 018381 154 LASRCLQYEPRERPNA------KSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~------~~v~~~ 175 (357)
++.+||..||.+|+++ .+++.|
T Consensus 233 li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 233 VLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 9999999999999984 577665
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=232.55 Aligned_cols=171 Identities=19% Similarity=0.251 Sum_probs=134.4
Q ss_pred CCCchhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCC
Q 018381 2 PNETLSKHLFHW--------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 67 (357)
Q Consensus 2 ~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg 67 (357)
++++|.+++... .+..+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||
T Consensus 91 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~kl~Dfg 169 (283)
T cd05091 91 SHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH-VVHKDLATRNVLVFDKLNVKISDLG 169 (283)
T ss_pred CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhheEecCCCceEecccc
Confidence 578888887421 1346899999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccC
Q 018381 68 LMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLE 140 (357)
Q Consensus 68 ~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (357)
+++...... ...+++.|+|||++.++.++.++|||||||++|||++ |..|+........ ...+.....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-----~~~i~~~~~ 244 (283)
T cd05091 170 LFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV-----IEMIRNRQV 244 (283)
T ss_pred cccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHcCCc
Confidence 987543321 2345678999999988889999999999999999998 6666554322111 111111112
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCc
Q 018381 141 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 141 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
...+..++..+.+++..||+.+|.+||++.+|+..|+.
T Consensus 245 ~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 245 LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 23455678889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=234.58 Aligned_cols=174 Identities=19% Similarity=0.284 Sum_probs=137.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.......+++.+++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||+++......
T Consensus 121 ~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 199 (302)
T cd05055 121 CCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVV 199 (302)
T ss_pred CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eehhhhccceEEEcCCCeEEECCCcccccccCCCceee
Confidence 47899999996434455999999999999999999999999 9999999999999999999999999987554322
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...++..|+|||++.+..++.++|||||||++|+|++ |..|+........ +............+...++.+.+
T Consensus 200 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 275 (302)
T cd05055 200 KGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK----FYKLIKEGYRMAQPEHAPAEIYD 275 (302)
T ss_pred cCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH----HHHHHHcCCcCCCCCCCCHHHHH
Confidence 2245678999999998889999999999999999998 8877654321110 11111111121223345678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
++.+||..+|++|||+.+++..|..+
T Consensus 276 li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 276 IMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 99999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=231.43 Aligned_cols=171 Identities=20% Similarity=0.264 Sum_probs=136.1
Q ss_pred CCCCchhhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCc
Q 018381 1 MPNETLSKHLFHW------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 68 (357)
Q Consensus 1 ~~~gsL~~~l~~~------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 68 (357)
++||+|.+++... ....+++.++..++.|++.|+.|||+.+ ++||||||+||+++.++.+||+|||+
T Consensus 90 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~kl~d~g~ 168 (280)
T cd05049 90 MEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-FVHRDLATRNCLVGYDLVVKIGDFGM 168 (280)
T ss_pred CCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eeccccccceEEEcCCCeEEECCccc
Confidence 4789999999532 1245899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCC
Q 018381 69 MKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEG 141 (357)
Q Consensus 69 ~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
++..... ....+++.|+|||++.++.++.++|||||||++|+|++ |..||.......... ........
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~-----~~~~~~~~ 243 (280)
T cd05049 169 SRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIE-----CITQGRLL 243 (280)
T ss_pred ceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-----HHHcCCcC
Confidence 8754322 22345678999999999999999999999999999998 988876532221111 11111111
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 142 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 142 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
..+...+..+.+++.+||..+|++||++.++++.|.
T Consensus 244 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 244 QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 223456788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-31 Score=238.60 Aligned_cols=163 Identities=21% Similarity=0.220 Sum_probs=132.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 78 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~g-iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~ 154 (325)
T cd05602 78 INGGELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTS 154 (325)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcc
Confidence 57899999995 4567899999999999999999999999 99999999999999999999999999874322 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.......... ...... ...++..+..+.++|.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~----~i~~~~--~~~~~~~~~~~~~li~ 228 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD----NILNKP--LQLKPNITNSARHLLE 228 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHH----HHHhCC--cCCCCCCCHHHHHHHH
Confidence 4568999999999999889999999999999999999999987543222111 111111 1233456778999999
Q ss_pred HhccCCCCCCCCHHHH
Q 018381 157 RCLQYEPRERPNAKSL 172 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v 172 (357)
+||+.+|.+||++.+.
T Consensus 229 ~~l~~~p~~R~~~~~~ 244 (325)
T cd05602 229 GLLQKDRTKRLGAKDD 244 (325)
T ss_pred HHcccCHHHCCCCCCC
Confidence 9999999999987643
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=227.42 Aligned_cols=171 Identities=24% Similarity=0.334 Sum_probs=138.9
Q ss_pred CCCCchhhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC
Q 018381 1 MPNETLSKHLFHWE-------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 73 (357)
+++|+|.+++.... ...+++.+++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||.+....
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC-cccCccCcceEEECCCCcEEEcccccccccc
Confidence 36899999995321 478999999999999999999999999 9999999999999999999999999998665
Q ss_pred CC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChh
Q 018381 74 DG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 146 (357)
Q Consensus 74 ~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (357)
.. ....++..|+|||.+.+..++.++||||||+++|+|++ |..||.......... ..........+..
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~ 231 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLE-----YLRKGYRLPKPEY 231 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHH-----HHHcCCCCCCCcc
Confidence 43 23456889999999988888999999999999999999 577776542221111 1111122234556
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 147 DGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 147 ~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
++.++.+++.+||..+|++|||+.+++.+|+
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 232 CPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 6789999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=233.16 Aligned_cols=176 Identities=21% Similarity=0.238 Sum_probs=137.5
Q ss_pred CCCCchhhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcc
Q 018381 1 MPNETLSKHLFHW-----------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 69 (357)
Q Consensus 1 ~~~gsL~~~l~~~-----------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 69 (357)
+++|+|.+++... ....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~ 167 (288)
T cd05093 89 MKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFGMS 167 (288)
T ss_pred CCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEeccCCcc
Confidence 4789999998531 1235999999999999999999999999 999999999999999999999999998
Q ss_pred cccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCC
Q 018381 70 KNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGH 142 (357)
Q Consensus 70 ~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
+..... ....++..|+|||++.+..++.++|+|||||++|+|++ |..||............ ... ....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i----~~~-~~~~ 242 (288)
T cd05093 168 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI----TQG-RVLQ 242 (288)
T ss_pred ccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HcC-CcCC
Confidence 754322 12234678999999998889999999999999999998 77776543222111110 000 0111
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+..++..+.+++.+||+.+|.+|||+.+++..|+.+...
T Consensus 243 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 243 RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 2334567899999999999999999999999998877643
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-31 Score=243.02 Aligned_cols=180 Identities=21% Similarity=0.356 Sum_probs=149.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
|+||+|.+||.+ .+..++..+++.++.+.++||+|||+++ +|||||-.+|||++.++.+||+|||+++......
T Consensus 243 ~~gGsL~~~L~k-~~~~v~~~ek~~~~~~AA~Gl~YLh~k~-~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~ 320 (474)
T KOG0194|consen 243 CNGGSLDDYLKK-NKKSLPTLEKLRFCYDAARGLEYLHSKN-CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKF 320 (474)
T ss_pred cCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHhHHHHHHHCC-CcchhHhHHHheecCCCeEEeCccccccCCcceeeccc
Confidence 689999999953 4457999999999999999999999999 9999999999999999999999999988665221
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
...-...|+|||.+..+.++.++|||||||++||+++ |..|+++........ ++.....+...+...|..+..++
T Consensus 321 ~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~----kI~~~~~r~~~~~~~p~~~~~~~ 396 (474)
T KOG0194|consen 321 LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKA----KIVKNGYRMPIPSKTPKELAKVM 396 (474)
T ss_pred cccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHH----HHHhcCccCCCCCCCHHHHHHHH
Confidence 1124578999999999999999999999999999998 677777653332221 22233445556667889999999
Q ss_pred HHhccCCCCCCCCHHHHHHHhCccccccCCC
Q 018381 156 SRCLQYEPRERPNAKSLVASLTPLQKEAEVP 186 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~~ 186 (357)
.+||..+|++||+|.++.+.|+.+......+
T Consensus 397 ~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~~ 427 (474)
T KOG0194|consen 397 KQCWKKDPEDRPTMSTIKKKLEALEKKKEAF 427 (474)
T ss_pred HHhccCChhhccCHHHHHHHHHHHHhccccc
Confidence 9999999999999999999998887776554
|
|
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=229.34 Aligned_cols=173 Identities=19% Similarity=0.255 Sum_probs=136.6
Q ss_pred CCCCchhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC
Q 018381 1 MPNETLSKHLFHW----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 76 (357)
+++|+|.+++... ....+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 89 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 167 (273)
T cd05035 89 MKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN-FIHRDLAARNCMLREDMTVCVADFGLSKKIYSGD 167 (273)
T ss_pred cCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchheEEECCCCeEEECCccceeeccccc
Confidence 4789999888432 2347899999999999999999999999 9999999999999999999999999988654322
Q ss_pred ------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHH
Q 018381 77 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 149 (357)
Q Consensus 77 ------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
...++..|++||++.+..++.++|||||||++|||++ |..||......... ..+........+..++.
T Consensus 168 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 242 (273)
T cd05035 168 YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIY-----DYLRHGNRLKQPEDCLD 242 (273)
T ss_pred cccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCCCCcCCCH
Confidence 1234578999999988889999999999999999999 77666543221111 11111111223455678
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
.+.+++.+||+.||++|||+.++++.|+.+
T Consensus 243 ~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 243 ELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=231.70 Aligned_cols=171 Identities=18% Similarity=0.268 Sum_probs=133.9
Q ss_pred CCCCchhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCccccc
Q 018381 1 MPNETLSKHLFHWE--------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 72 (357)
+++|+|.+++.... ...+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 169 (277)
T cd05062 91 MTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 169 (277)
T ss_pred CCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCcchheEEEcCCCCEEECCCCCcccc
Confidence 47899999985321 234688999999999999999999999 999999999999999999999999998754
Q ss_pred CCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCCh
Q 018381 73 RDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 145 (357)
Q Consensus 73 ~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
.... ...+++.|+|||++.++.++.++|||||||++|||++ |..||......... +..........+.
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~-----~~~~~~~~~~~~~ 244 (277)
T cd05062 170 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVL-----RFVMEGGLLDKPD 244 (277)
T ss_pred CCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHcCCcCCCCC
Confidence 3321 2244678999999998889999999999999999999 56666543221111 1111111112344
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
.++..+.+++.+||+.+|++|||+.+++..|+
T Consensus 245 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 245 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 56778999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=228.06 Aligned_cols=172 Identities=23% Similarity=0.304 Sum_probs=138.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++....+..+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc
Confidence 46899999986545568999999999999999999999999 9999999999999999999999999987554221
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|+|||++.+..++.++|+||||+++|+|++ |+.||.......... ........+.+...+.++.++
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l 235 (260)
T cd05067 161 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQ-----NLERGYRMPRPDNCPEELYEL 235 (260)
T ss_pred cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHH-----HHHcCCCCCCCCCCCHHHHHH
Confidence 2345678999999988888999999999999999999 888876442221111 111111222344566789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
+.+||..+|++||++++++..|+.
T Consensus 236 i~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 236 MRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHccCChhhCCCHHHHHHHhhc
Confidence 999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=230.78 Aligned_cols=170 Identities=11% Similarity=0.134 Sum_probs=133.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
+++|+|.+++.......+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||+++.... ..
T Consensus 91 ~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~ 169 (272)
T cd06637 91 CGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN 169 (272)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHEEECCCCCEEEccCCCceecccccccCC
Confidence 46899999996434567999999999999999999999999 99999999999999999999999999875432 23
Q ss_pred ccccCCCCCCcccccc-----CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 77 SYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
...|++.|+|||++.+ ..++.++|+|||||++|+|++|+.||.......... ..............++..+
T Consensus 170 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 245 (272)
T cd06637 170 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----LIPRNPAPRLKSKKWSKKF 245 (272)
T ss_pred cccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH----HHhcCCCCCCCCCCcCHHH
Confidence 4568899999999863 457789999999999999999998875431111110 0011111111223456789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 018381 152 VRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+++.+||..+|.+|||+.+++.+
T Consensus 246 ~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 246 QSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred HHHHHHHcCCChhhCCCHHHHhhC
Confidence 999999999999999999999876
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=223.86 Aligned_cols=168 Identities=21% Similarity=0.246 Sum_probs=128.3
Q ss_pred chhhhhccCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CCcc
Q 018381 5 TLSKHLFHWEN--QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSY 78 (357)
Q Consensus 5 sL~~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~ 78 (357)
+|.+|+..... ..++...+..++.||+.||+|||+.+ |+||||||+||||+++|.+||+|||+|+...- ..+.
T Consensus 102 DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~-IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~e 180 (323)
T KOG0594|consen 102 DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG-ILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPE 180 (323)
T ss_pred cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCcceEEECCCCcEeeeccchHHHhcCCccccccc
Confidence 45666632221 46788999999999999999999999 99999999999999999999999999985552 2345
Q ss_pred ccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhH----------------hhhcCcccccccc--cc
Q 018381 79 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALD----------------LIRGKNFLMLMDS--CL 139 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~----------------~~~~~~~~~~~~~--~~ 139 (357)
++|.+|.|||++.+. .|+...||||+||++.||++++..|++...- .+... ....+. .+
T Consensus 181 vvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v--~~~~~~k~~f 258 (323)
T KOG0594|consen 181 VVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGV--SSLPDYKAPF 258 (323)
T ss_pred EEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCc--cccccccccC
Confidence 789999999999885 6889999999999999999999888765210 00000 000000 11
Q ss_pred CCCC-Ch-------hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 140 EGHF-SN-------DDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 140 ~~~~-~~-------~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.... +. ...+...+++.+||+++|..|.|+..++.|
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 259 PKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 1111 11 122579999999999999999999999998
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=227.38 Aligned_cols=169 Identities=20% Similarity=0.257 Sum_probs=138.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++|++|.+++....+..+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~ 159 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK-ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN 159 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence 47899999996544678999999999999999999999999 9999999999999999999999999987554332
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...+++.|+|||++.+..++.++|+|||||++|+|++|+.||.......... ..... .....+...+..+.+++.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~i~ 234 (256)
T cd08529 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALIL----KIIRG-VFPPVSQMYSQQLAQLID 234 (256)
T ss_pred ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHHcC-CCCCCccccCHHHHHHHH
Confidence 3467889999999998888999999999999999999999886543221111 11111 111233356678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||+.+|++||++.+++.+
T Consensus 235 ~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 235 QCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHccCCcccCcCHHHHhhC
Confidence 9999999999999999876
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=232.00 Aligned_cols=171 Identities=16% Similarity=0.183 Sum_probs=131.9
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Ccccc
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYST 80 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~g 80 (357)
++|.+++.......+++.++..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....+
T Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 169 (288)
T cd07863 91 QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVV 169 (288)
T ss_pred cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccCccccccCcccCCCccc
Confidence 57888885444456999999999999999999999999 999999999999999999999999998865433 23467
Q ss_pred CCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC-----------cccc---ccccccC------
Q 018381 81 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------NFLM---LMDSCLE------ 140 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-----------~~~~---~~~~~~~------ 140 (357)
|..|+|||++.+..++.++|||||||++|+|++|+.||........... .+.. .....+.
T Consensus 170 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (288)
T cd07863 170 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRP 249 (288)
T ss_pred cccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCc
Confidence 8999999999988899999999999999999999987754321110000 0000 0000000
Q ss_pred -CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 141 -GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 141 -~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....+.++..+.++|.+||+.||++|||+.+++.|
T Consensus 250 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 250 VQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred hHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 01112456778999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-31 Score=246.89 Aligned_cols=171 Identities=23% Similarity=0.306 Sum_probs=130.2
Q ss_pred Cchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-CeEEecCCcccccCCC---Cc
Q 018381 4 ETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 4 gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~---~~ 77 (357)
|+|.+++.. ..+..+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... ..
T Consensus 151 ~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~-IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~ 229 (440)
T PTZ00036 151 QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVS 229 (440)
T ss_pred ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCcCHHHEEEcCCCCceeeeccccchhccCCCCccc
Confidence 566666632 24578999999999999999999999999 99999999999998665 6999999999865432 24
Q ss_pred cccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh-hhc------C-----------ccc-----c
Q 018381 78 YSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRG------K-----------NFL-----M 133 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~------~-----------~~~-----~ 133 (357)
..||+.|+|||++.+ ..++.++|||||||++|||++|..||.+..... +.. . .+. .
T Consensus 230 ~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~ 309 (440)
T PTZ00036 230 YICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPD 309 (440)
T ss_pred CCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCc
Confidence 578999999999876 468999999999999999999998886542110 000 0 000 0
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 134 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.....+...++...++++.+||.+||+.||.+|||+.+++.|
T Consensus 310 ~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 310 VKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred cCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 000111112333456789999999999999999999999987
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=237.25 Aligned_cols=161 Identities=22% Similarity=0.265 Sum_probs=131.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ....+++.++..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.... ..
T Consensus 78 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05603 78 VNGGELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTS 154 (321)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccc
Confidence 57899998884 4567999999999999999999999999 99999999999999999999999999875322 22
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|||++|..||........... .... ...++...+..+.+++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~----i~~~--~~~~~~~~~~~~~~li~ 228 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDN----ILHK--PLQLPGGKTVAACDLLV 228 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHH----HhcC--CCCCCCCCCHHHHHHHH
Confidence 45689999999999988899999999999999999999999865432221111 1111 11234456678999999
Q ss_pred HhccCCCCCCCCHH
Q 018381 157 RCLQYEPRERPNAK 170 (357)
Q Consensus 157 ~cl~~~p~~Rps~~ 170 (357)
+||+.+|.+||++.
T Consensus 229 ~~l~~~p~~R~~~~ 242 (321)
T cd05603 229 GLLHKDQRRRLGAK 242 (321)
T ss_pred HHccCCHhhcCCCC
Confidence 99999999998753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=233.75 Aligned_cols=158 Identities=24% Similarity=0.323 Sum_probs=125.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC-----ccccCCCCCCcc
Q 018381 14 ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SYSTNLAFTPPE 88 (357)
Q Consensus 14 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE 88 (357)
.+-.|++.++.-+++||+.||+|||+++ |+|||||.+||||+.+|.+||+|||||+++.... ..+.|+||.|||
T Consensus 211 p~vkft~~qIKc~mkQLl~Gl~~cH~~g-vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPE 289 (560)
T KOG0600|consen 211 PGVKFTEPQIKCYMKQLLEGLEYCHSRG-VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPE 289 (560)
T ss_pred CCcccChHHHHHHHHHHHHHHHHHhhcC-eeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChH
Confidence 3557999999999999999999999999 9999999999999999999999999999766443 446799999999
Q ss_pred cccc-CCCCccccccchHHHHHHHHhCCCCCCcchh----------------HhhhcCccccccc-cccCC--CC-----
Q 018381 89 YLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL----------------DLIRGKNFLMLMD-SCLEG--HF----- 143 (357)
Q Consensus 89 ~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~----------------~~~~~~~~~~~~~-~~~~~--~~----- 143 (357)
.+.| ..|+.+.|+||.|||+.||+.|++++++... +.|. ..++.. ..+.. .+
T Consensus 290 LLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~---~~kLP~~~~~kp~~~y~r~l~ 366 (560)
T KOG0600|consen 290 LLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP---VSKLPHATIFKPQQPYKRRLR 366 (560)
T ss_pred HhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc---cccCCcccccCCCCcccchHH
Confidence 9988 5689999999999999999999988776410 0111 001110 00000 00
Q ss_pred --ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 144 --SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 144 --~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
-...+....+|+..+|..||.+|.|+.+++.+
T Consensus 367 E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 367 ETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred HHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 11346778899999999999999999999876
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=232.18 Aligned_cols=172 Identities=19% Similarity=0.267 Sum_probs=137.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC---c
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---S 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~ 77 (357)
+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||+++...... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER-IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 47899999886444567999999999999999999999999 9999999999999999999999999988654332 3
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
..|++.|+|||++.+..++.++|+|||||++|+|++|..||.+....... ..+...+.. ....++...+..+.++|.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR-EEVERRVKE-DQEEYSEKFSEAARSICRQ 238 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH-HHHHHHhhh-cccccCcccCHHHHHHHHH
Confidence 46899999999999888999999999999999999999988753221110 001111111 1122344567789999999
Q ss_pred hccCCCCCCC-----CHHHHHHH
Q 018381 158 CLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rp-----s~~~v~~~ 175 (357)
||..||.+|| ++.+++.+
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 239 LLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HccCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999 88899887
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=231.23 Aligned_cols=171 Identities=20% Similarity=0.234 Sum_probs=134.2
Q ss_pred CCCCchhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCC
Q 018381 1 MPNETLSKHLFHWE-------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 67 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg 67 (357)
+++|+|.+++.... ...+++.+++.++.|++.|+.|||+.+ ++||||||+||++++++.+||+|||
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~nil~~~~~~~kL~dfg 167 (280)
T cd05092 89 MRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH-FVHRDLATRNCLVGQGLVVKIGDFG 167 (280)
T ss_pred CCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC-eecccccHhhEEEcCCCCEEECCCC
Confidence 47899999985321 135899999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccC
Q 018381 68 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLE 140 (357)
Q Consensus 68 ~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (357)
+++..... ....+++.|+|||++.+..++.++|||||||++|+|++ |..||......... ........
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~~~~~~~~ 242 (280)
T cd05092 168 MSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI-----ECITQGRE 242 (280)
T ss_pred ceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH-----HHHHcCcc
Confidence 98754322 12334678999999998889999999999999999998 77776543211111 00111111
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 141 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 141 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
...+..+++.+.+++.+||+.||++||++.+|++.|+
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 243 LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1233456778999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=226.31 Aligned_cols=167 Identities=20% Similarity=0.312 Sum_probs=131.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC-------eEEecCCcccccC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN-------PRLSCFGLMKNSR 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~-------~kl~Dfg~~~~~~ 73 (357)
+++|+|..++. .....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +|++|||++....
T Consensus 86 ~~~~~l~~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~ 163 (262)
T cd05077 86 VEFGPLDLFMH-RKSDVLTTPWKFKVAKQLASALSYLEDKD-LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVL 163 (262)
T ss_pred ccCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHhhhCC-eECCCCCcccEEEecCCccCCCCceeEeCCCCCCcccc
Confidence 46889988884 24567999999999999999999999999 999999999999986664 8999999988766
Q ss_pred CCCccccCCCCCCccccc-cCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 74 DGKSYSTNLAFTPPEYLR-TGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 74 ~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
......++..|+|||++. +..++.++|||||||++|+|++ |..|+......... ....... ......+.++
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~ 236 (262)
T cd05077 164 SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-----RFYEGQC--MLVTPSCKEL 236 (262)
T ss_pred CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-----HHHhcCc--cCCCCChHHH
Confidence 656667889999999987 4667889999999999999984 66665433211110 0001111 1122235679
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 152 VRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
.+||.+||..||++||++.+|+.++
T Consensus 237 ~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 237 ADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHhc
Confidence 9999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=213.79 Aligned_cols=166 Identities=17% Similarity=0.126 Sum_probs=127.6
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCccccCCC
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 83 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~ 83 (357)
|||.+++.. .+.++++.+++.|+.||+.||.|||+.+ ||+|||++.++.+|+ ||+++...... ..||+.
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 899999953 4667999999999999999999999997 999999999999999 99988665433 368899
Q ss_pred CCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccc-c-CCCCChhhHH--HHHHHHHHhc
Q 018381 84 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC-L-EGHFSNDDGT--ELVRLASRCL 159 (357)
Q Consensus 84 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~--~~~~li~~cl 159 (357)
|+|||++.+..++.++|||||||++|||++|+.||............+....... . ....+..... .+.++|.+||
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 149 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA 149 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence 9999999999999999999999999999999988754311000000000000000 0 0011223333 6999999999
Q ss_pred cCCCCCCCCHHHHHHHhCccc
Q 018381 160 QYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 160 ~~~p~~Rps~~~v~~~l~~~~ 180 (357)
..+|.+||++.++++++....
T Consensus 150 ~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 150 SRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hcccccccCHHHHHHHHHHHH
Confidence 999999999999999976553
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=234.15 Aligned_cols=176 Identities=20% Similarity=0.304 Sum_probs=138.6
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
+++|+|.+++..+. ...+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 103 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nili~~~~~~kl~D~ 181 (304)
T cd05101 103 ASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADF 181 (304)
T ss_pred CCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC-eeecccccceEEEcCCCcEEECCC
Confidence 46899999996421 245899999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...+++.|+|||++.+..++.++||||||+++|+|++ |..|+.......+.. .+....
T Consensus 182 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-----~~~~~~ 256 (304)
T cd05101 182 GLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-----LLKEGH 256 (304)
T ss_pred ccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH-----HHHcCC
Confidence 9988654321 2234678999999988889999999999999999998 666665432222111 111111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
....+..++..+.+++.+||..+|++|||+.++++.|..+...
T Consensus 257 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 257 RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1123445678899999999999999999999999999876544
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=234.44 Aligned_cols=176 Identities=22% Similarity=0.323 Sum_probs=139.0
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
+++|+|.+++.... ...+++.++..++.||+.||.|||+++ ++||||||+||+++.++.+||+||
T Consensus 100 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~~kL~Df 178 (314)
T cd05099 100 AAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR-CIHRDLAARNVLVTEDNVMKIADF 178 (314)
T ss_pred CCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeeccccceeEEEcCCCcEEEccc
Confidence 47899999995421 246899999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...++..|+|||++.++.++.++|+|||||++|+|++ |..||.......... ......
T Consensus 179 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~-----~~~~~~ 253 (314)
T cd05099 179 GLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK-----LLREGH 253 (314)
T ss_pred cccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCC
Confidence 9998554321 1123467999999988889999999999999999999 777765432211111 111111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
....+..++.++.+++.+||..+|++|||+.++++.|..+...
T Consensus 254 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 254 RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 1223455677899999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=236.25 Aligned_cols=173 Identities=21% Similarity=0.316 Sum_probs=133.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--Ccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~ 78 (357)
+++|+|.+++. ..+.+++..+..++.|++.||.|||++++++|+||||+|||++.++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 162 (333)
T cd06650 85 MDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (333)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccC
Confidence 47899999995 45679999999999999999999998633999999999999999999999999998754332 345
Q ss_pred ccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC-------ccc-------------------
Q 018381 79 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-------NFL------------------- 132 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-------~~~------------------- 132 (357)
.||..|+|||++.+..++.++|+|||||++|+|++|+.||........... ...
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
T cd06650 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYG 242 (333)
T ss_pred CCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhc
Confidence 689999999999988899999999999999999999998864322111100 000
Q ss_pred ----------cccc---cccCCCCC-hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 133 ----------MLMD---SCLEGHFS-NDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 133 ----------~~~~---~~~~~~~~-~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.... .......+ ...+.++.+||.+||+.||++|||+.+++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 243 PDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred ccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 0000 00000011 1235679999999999999999999999886
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=232.78 Aligned_cols=158 Identities=12% Similarity=0.098 Sum_probs=124.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----------CccccCCCC
Q 018381 16 QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----------KSYSTNLAF 84 (357)
Q Consensus 16 ~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----------~~~~gt~~y 84 (357)
...++..+..++.|++.||.|||+++ ++||||||+|||++.++.++|+|||+++..... ....||+.|
T Consensus 121 ~~~~~~~~~~i~~qi~~~l~~lH~~~-iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y 199 (294)
T PHA02882 121 KCKNKKLIKNIMKDMLTTLEYIHEHG-ISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYY 199 (294)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccc
Confidence 35688899999999999999999999 999999999999999999999999998754211 224689999
Q ss_pred CCccccccCCCCccccccchHHHHHHHHhCCCCCCcchh-Hh-hhc--Ccc-ccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 85 TPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL-DL-IRG--KNF-LMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 85 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-~~-~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
+|||++.+..++.++|||||||++|||++|+.||..... .. ... ..+ ........ ....++..+.+++..||
T Consensus 200 ~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 276 (294)
T PHA02882 200 AGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKI---KIKNANKFIYDFIECVT 276 (294)
T ss_pred cCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHH
Confidence 999999998999999999999999999999999865411 10 000 001 11111111 12345688999999999
Q ss_pred cCCCCCCCCHHHHHHHhC
Q 018381 160 QYEPRERPNAKSLVASLT 177 (357)
Q Consensus 160 ~~~p~~Rps~~~v~~~l~ 177 (357)
..+|++||++.++++.|+
T Consensus 277 ~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 277 KLSYEEKPDYDALIKIFD 294 (294)
T ss_pred hCCCCCCCCHHHHHHhhC
Confidence 999999999999998763
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=236.02 Aligned_cols=160 Identities=18% Similarity=0.287 Sum_probs=131.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... ..
T Consensus 83 ~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~ 159 (323)
T cd05615 83 VNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTR 159 (323)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeccccccccCCCCcccc
Confidence 57899999994 4567999999999999999999999999 99999999999999999999999999875432 22
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|+|||||++|+|++|+.||.......... ...... ..++...+..+.+++.
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~----~i~~~~--~~~p~~~~~~~~~li~ 233 (323)
T cd05615 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ----SIMEHN--VSYPKSLSKEAVSICK 233 (323)
T ss_pred CccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHH----HHHhCC--CCCCccCCHHHHHHHH
Confidence 4568999999999998889999999999999999999999887543221111 111111 1234456678999999
Q ss_pred HhccCCCCCCCCH
Q 018381 157 RCLQYEPRERPNA 169 (357)
Q Consensus 157 ~cl~~~p~~Rps~ 169 (357)
+||..+|.+|++.
T Consensus 234 ~~l~~~p~~R~~~ 246 (323)
T cd05615 234 GLMTKHPSKRLGC 246 (323)
T ss_pred HHcccCHhhCCCC
Confidence 9999999999974
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=231.14 Aligned_cols=172 Identities=20% Similarity=0.312 Sum_probs=135.4
Q ss_pred CCCCchhhhhccCC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEec
Q 018381 1 MPNETLSKHLFHWE---------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSC 65 (357)
Q Consensus 1 ~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~D 65 (357)
+++|+|.+++.... ...+++.++..++.|++.||.|||+++ ++||||||+||+++.++.+||+|
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~nili~~~~~~kl~d 167 (283)
T cd05090 89 LNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF-FVHKDLAARNILIGEQLHVKISD 167 (283)
T ss_pred CCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC-eehhccccceEEEcCCCcEEecc
Confidence 46889999984211 235899999999999999999999999 99999999999999999999999
Q ss_pred CCcccccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccc
Q 018381 66 FGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSC 138 (357)
Q Consensus 66 fg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 138 (357)
||+++..... ....++..|+|||++.++.++.++|+|||||++|||++ |..||........ ...+...
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~-----~~~~~~~ 242 (283)
T cd05090 168 LGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV-----IEMVRKR 242 (283)
T ss_pred ccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHcC
Confidence 9998754322 23345678999999988889999999999999999998 8777654322111 1111111
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCc
Q 018381 139 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 139 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
.....+..+++.+.+++.+||..+|.+||++.+|+++|..
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 243 QLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1112344567889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=229.03 Aligned_cols=173 Identities=20% Similarity=0.240 Sum_probs=134.8
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
+++|+|.+++.... ...+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 78 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 78 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccccceEEEcCCCeEEECCC
Confidence 47899999995321 135899999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCC---CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCC
Q 018381 67 GLMKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGH 142 (357)
Q Consensus 67 g~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
|+++..... .....+..|+|||++.+..++.++|+|||||++|||++ |..||......... ..........
T Consensus 157 gl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~-----~~~~~~~~~~ 231 (270)
T cd05047 157 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-----EKLPQGYRLE 231 (270)
T ss_pred CCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHH-----HHHhCCCCCC
Confidence 998633221 11223567999999988889999999999999999997 88887543221111 1111111222
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
.+..++..+.+++.+||..+|.+|||+.+++..|..+
T Consensus 232 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 232 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 3344567899999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=238.46 Aligned_cols=170 Identities=21% Similarity=0.346 Sum_probs=130.0
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------- 75 (357)
+++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 163 (338)
T cd07859 87 ESDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 163 (338)
T ss_pred CCCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEccCccccccccccCccccc
Confidence 468888884 4567999999999999999999999999 999999999999999999999999998754321
Q ss_pred CccccCCCCCCcccccc--CCCCccccccchHHHHHHHHhCCCCCCcchhHh-------------------hhcCccccc
Q 018381 76 KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-------------------IRGKNFLML 134 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-------------------~~~~~~~~~ 134 (357)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... +........
T Consensus 164 ~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 243 (338)
T cd07859 164 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRY 243 (338)
T ss_pred cCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHH
Confidence 23468999999999875 578899999999999999999998886432100 000000000
Q ss_pred c---ccccCCCC---ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 135 M---DSCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 135 ~---~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
. .......+ -+..++.+.+++.+||..+|++|||+.+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 244 LSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 00000000 01345678999999999999999999999987
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=255.57 Aligned_cols=177 Identities=23% Similarity=0.355 Sum_probs=143.2
Q ss_pred CCCCchhhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC
Q 018381 1 MPNETLSKHLFHW-----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~-----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 75 (357)
|+||+|..||++. +...++....+.|+.||++|+.||++++ +|||||..+||||+....|||+|||+|+..-..
T Consensus 777 M~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~-fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~ 855 (1025)
T KOG1095|consen 777 MEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH-FVHRDLAARNCLLDERRVVKIADFGLARDIYDK 855 (1025)
T ss_pred cccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC-CcCcchhhhheeecccCcEEEcccchhHhhhhc
Confidence 7899999999642 1567999999999999999999999999 999999999999999999999999999943322
Q ss_pred Ccc------ccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccc-ccccccCCCCChhhH
Q 018381 76 KSY------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM-LMDSCLEGHFSNDDG 148 (357)
Q Consensus 76 ~~~------~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 148 (357)
..+ .-...|||||.+..+.++.|+|||||||++||++|...++++.. .+..+.. ..... +.+.|..||
T Consensus 856 ~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~----~n~~v~~~~~~gg-RL~~P~~CP 930 (1025)
T KOG1095|consen 856 DYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR----SNFEVLLDVLEGG-RLDPPSYCP 930 (1025)
T ss_pred hheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc----chHHHHHHHHhCC-ccCCCCCCC
Confidence 211 12467999999999999999999999999999999655444321 1111112 12222 556788899
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 149 TELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 149 ~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
+.+.++|..||+.+|++||++..|++.+..+....
T Consensus 931 ~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 931 EKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred hHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 99999999999999999999999999887766553
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=226.40 Aligned_cols=172 Identities=24% Similarity=0.380 Sum_probs=138.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
+++|+|.+++.......+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (254)
T cd05083 80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSK 158 (254)
T ss_pred CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCcEEECCCccceeccccCCCCC
Confidence 47899999996544557999999999999999999999999 999999999999999999999999998755432 2233
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
.+..|+|||++.++.++.++|+|||||++|+|++ |+.||.......... ..........+..++..+.+++.+|
T Consensus 159 ~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~~ 233 (254)
T cd05083 159 LPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKE-----CVEKGYRMEPPEGCPADVYVLMTSC 233 (254)
T ss_pred CCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHH-----HHhCCCCCCCCCcCCHHHHHHHHHH
Confidence 4578999999988889999999999999999997 887775543222111 1111122223445678899999999
Q ss_pred ccCCCCCCCCHHHHHHHhCc
Q 018381 159 LQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~l~~ 178 (357)
|..+|++||++.++++.|+.
T Consensus 234 l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 234 WETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred cCCChhhCcCHHHHHHHHcc
Confidence 99999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=230.14 Aligned_cols=171 Identities=18% Similarity=0.279 Sum_probs=134.4
Q ss_pred CCCCchhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC---CeEEecCCccccc
Q 018381 1 MPNETLSKHLFHWE-----NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~~~~~ 72 (357)
++||+|.+++.... ...+++.++++++.||+.||.|||+++ ++||||||+||+++.++ .+||+|||+++..
T Consensus 91 ~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~ 169 (277)
T cd05036 91 MAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH-FIHRDIAARNCLLTCKGPGRVAKIADFGMARDI 169 (277)
T ss_pred CCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchheEEEeccCCCcceEeccCcccccc
Confidence 46899999995322 136899999999999999999999999 99999999999998655 5899999998865
Q ss_pred CCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCCh
Q 018381 73 RDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 145 (357)
Q Consensus 73 ~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
.... ....+..|+|||++.+..++.++|||||||++|+|++ |..||......... ..+........+.
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~-----~~~~~~~~~~~~~ 244 (277)
T cd05036 170 YRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVM-----EFVTGGGRLDPPK 244 (277)
T ss_pred CCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHcCCcCCCCC
Confidence 3221 1223467999999998889999999999999999997 88777654222211 1111112223445
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
.++..+.+++.+||..+|++|||+.+|+++|.
T Consensus 245 ~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 245 GCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 56788999999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=240.97 Aligned_cols=168 Identities=19% Similarity=0.181 Sum_probs=133.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. +..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 125 ~~gg~L~~~l~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~ 200 (370)
T cd05596 125 MPGGDLVNLMS---NYDIPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRC 200 (370)
T ss_pred CCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccC
Confidence 57999999993 456899999999999999999999999 999999999999999999999999998755432
Q ss_pred CccccCCCCCCccccccC----CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCC--hhhHH
Q 018381 76 KSYSTNLAFTPPEYLRTG----RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS--NDDGT 149 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 149 (357)
....||+.|+|||++.+. .++.++|||||||++|||++|+.||......... ...........++ ...+.
T Consensus 201 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~ 276 (370)
T cd05596 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY----SKIMDHKNSLTFPDDIEISK 276 (370)
T ss_pred CCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHH----HHHHcCCCcCCCCCcCCCCH
Confidence 245689999999998653 3788999999999999999999998764322111 1111111111122 24578
Q ss_pred HHHHHHHHhccCCCCC--CCCHHHHHHHh
Q 018381 150 ELVRLASRCLQYEPRE--RPNAKSLVASL 176 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~--Rps~~~v~~~l 176 (357)
.+.++|.+||..+|.+ |+++.+++.|-
T Consensus 277 ~~~~li~~~L~~~p~r~~R~s~~ell~h~ 305 (370)
T cd05596 277 QAKDLICAFLTDREVRLGRNGVDEIKSHP 305 (370)
T ss_pred HHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence 8999999999999988 99999999883
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=227.13 Aligned_cols=170 Identities=24% Similarity=0.319 Sum_probs=134.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 77 (357)
++||+|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (256)
T cd05059 81 MANGCLLNYLRE-RKGKLGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS 158 (256)
T ss_pred CCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHhhEEECCCCcEEECCcccceeccccccccc
Confidence 478999999953 3457999999999999999999999999 99999999999999999999999999875543221
Q ss_pred --cccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 78 --YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 78 --~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
..++..|+|||.+.+..++.++|+||||+++|+|++ |..||......... ...........+..++..+.++
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l 233 (256)
T cd05059 159 QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV-----ESVSAGYRLYRPKLAPTEVYTI 233 (256)
T ss_pred CCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH-----HHHHcCCcCCCCCCCCHHHHHH
Confidence 123457999999998889999999999999999999 67676543211111 1111112223344567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhC
Q 018381 155 ASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+.+||..+|++|||+.++++.|.
T Consensus 234 i~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 234 MYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred HHHHhcCChhhCcCHHHHHHHhC
Confidence 99999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=246.74 Aligned_cols=170 Identities=19% Similarity=0.268 Sum_probs=129.1
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeecCCCCCeeeCCCC----------------CeEEec
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDG----------------NPRLSC 65 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~iiH~dlkp~Nill~~~~----------------~~kl~D 65 (357)
||+|.+++. ..+.+++.++..|+.||+.||.|||+ .+ ||||||||+|||++.++ .+||+|
T Consensus 215 g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~g-IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~D 291 (467)
T PTZ00284 215 GPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICD 291 (467)
T ss_pred CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEecCCcccccccccccCCCCceEEECC
Confidence 678888885 35689999999999999999999998 48 99999999999998765 499999
Q ss_pred CCcccccCC-CCccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHh----h-----------hcC
Q 018381 66 FGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL----I-----------RGK 129 (357)
Q Consensus 66 fg~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~----~-----------~~~ 129 (357)
||++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... + ...
T Consensus 292 fG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~ 371 (467)
T PTZ00284 292 LGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGR 371 (467)
T ss_pred CCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhh
Confidence 998865433 335679999999999999999999999999999999999999886532110 0 000
Q ss_pred ----cccccccc--ccCCCC---------------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 130 ----NFLMLMDS--CLEGHF---------------SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 130 ----~~~~~~~~--~~~~~~---------------~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....+... .+.... .....+.+.+||.+||+.||++|||+.++++|
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 372 CGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred ccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 00000000 000000 00123568899999999999999999999996
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=230.28 Aligned_cols=172 Identities=16% Similarity=0.207 Sum_probs=130.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|..+. .....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~~l~~~~--~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 82 VEKNMLELLE--EMPNGVPPEKVRSYIYQLIKAIHWCHKND-IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred CCCCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 3566665444 24567999999999999999999999999 999999999999999999999999998865432
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHh-h-hcCc------------------ccccc
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-I-RGKN------------------FLMLM 135 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~-~~~~------------------~~~~~ 135 (357)
....||+.|+|||++.+..++.++|+|||||++|||++|+.||....... . .... .....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 23468999999999998889999999999999999999998886532110 0 0000 00000
Q ss_pred ccccC------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 DSCLE------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 ~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+... .......+..+.++|.+||+.||++|||+.++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 00111246779999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=238.92 Aligned_cols=169 Identities=17% Similarity=0.141 Sum_probs=129.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+.+++.++..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~g-ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~ 159 (363)
T cd05628 83 LPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQLG-FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEF 159 (363)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCCEEEeeccCcccccccccccc
Confidence 57999999995 4568999999999999999999999999 999999999999999999999999998743211
Q ss_pred ----------------------------------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcc
Q 018381 76 ----------------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH 121 (357)
Q Consensus 76 ----------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~ 121 (357)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~ 239 (363)
T cd05628 160 YRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (363)
T ss_pred cccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence 1346899999999999888999999999999999999999998754
Q ss_pred hhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCC---CCCCHHHHHHH
Q 018381 122 ALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR---ERPNAKSLVAS 175 (357)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~---~Rps~~~v~~~ 175 (357)
........ +... ......+.....++++.++|.+++. +|. .||++.+|+.|
T Consensus 240 ~~~~~~~~-i~~~-~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 240 TPQETYKK-VMNW-KETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CHHHHHHH-HHcC-cCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCC
Confidence 32211111 0000 0001001112345778899888654 444 45899999987
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=233.09 Aligned_cols=176 Identities=20% Similarity=0.242 Sum_probs=137.2
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
++||+|.+++.... ...+++.+++.++.||+.||.|||+++ ++||||||+|||++.++.+||+||
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dlkp~Nili~~~~~~kl~df 168 (303)
T cd05088 90 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADF 168 (303)
T ss_pred CCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEecCCCcEEeCcc
Confidence 47899999995321 236899999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCC---CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCC
Q 018381 67 GLMKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGH 142 (357)
Q Consensus 67 g~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
|+++..... ....++..|+|||++.+..++.++|||||||++|||++ |..||......... ..........
T Consensus 169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-----~~~~~~~~~~ 243 (303)
T cd05088 169 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-----EKLPQGYRLE 243 (303)
T ss_pred ccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHH-----HHHhcCCcCC
Confidence 998643221 11223567999999988888999999999999999998 88887543221111 1111111222
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+...+..+.+++.+||..+|++||++.+++..|..+...
T Consensus 244 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 244 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 3344567899999999999999999999999998776544
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=234.54 Aligned_cols=176 Identities=22% Similarity=0.312 Sum_probs=139.2
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
+++|+|.+++..+. ...+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 106 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~~kL~df 184 (307)
T cd05098 106 ASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADF 184 (307)
T ss_pred CCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHHheEEcCCCcEEECCC
Confidence 46899999996422 235899999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...+++.|+|||++.+..++.++|+|||||++|+|++ |..|+.......+. ..+....
T Consensus 185 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~-----~~~~~~~ 259 (307)
T cd05098 185 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-----KLLKEGH 259 (307)
T ss_pred cccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH-----HHHHcCC
Confidence 9987554321 1123468999999998889999999999999999998 77666543222111 1111112
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
....+..++.++.++|.+||..+|++|||+.++++.|..+...
T Consensus 260 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 260 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 2233455678899999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=226.28 Aligned_cols=170 Identities=24% Similarity=0.335 Sum_probs=134.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. .+..+++.+++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++.......
T Consensus 75 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 152 (252)
T cd05084 75 VQGGDFLTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAST 152 (252)
T ss_pred ccCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEEcCCCcEEECccccCccccccccccc
Confidence 468999999952 3457999999999999999999999999 9999999999999999999999999987543321
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...++..|+|||.+.++.++.++|+|||||++|+|++ |..|+........ ............+..++..+.+
T Consensus 153 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 227 (252)
T cd05084 153 GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT-----REAIEQGVRLPCPELCPDAVYR 227 (252)
T ss_pred CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH-----HHHHHcCCCCCCcccCCHHHHH
Confidence 1122456999999998889999999999999999998 7666543221111 1111111222344556788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhC
Q 018381 154 LASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
++.+||..+|++|||+.++++.|.
T Consensus 228 li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 228 LMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHh
Confidence 999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-31 Score=238.06 Aligned_cols=161 Identities=20% Similarity=0.233 Sum_probs=131.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 78 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 78 VNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcc
Confidence 57899999884 4568999999999999999999999999 99999999999999999999999999875322 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.......+... ..... ...++..+..+.+++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~ll~ 228 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDN----ILHKP--LVLRPGASLTAWSILE 228 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHH----HHcCC--ccCCCCCCHHHHHHHH
Confidence 45689999999999998899999999999999999999998875432221111 11111 1123345678999999
Q ss_pred HhccCCCCCCCCHH
Q 018381 157 RCLQYEPRERPNAK 170 (357)
Q Consensus 157 ~cl~~~p~~Rps~~ 170 (357)
+||..+|.+||++.
T Consensus 229 ~ll~~~p~~R~~~~ 242 (325)
T cd05604 229 ELLEKDRQRRLGAK 242 (325)
T ss_pred HHhccCHHhcCCCC
Confidence 99999999999875
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=232.46 Aligned_cols=175 Identities=15% Similarity=0.255 Sum_probs=138.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 167 (303)
T cd05110 90 MPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 167 (303)
T ss_pred cCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcC-eeccccccceeeecCCCceEEccccccccccCcccccc
Confidence 478999999853 3457899999999999999999999999 9999999999999999999999999998554321
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...++..|++||++.+..++.++|||||||++|||++ |+.||.......... ..........+..++..+.+
T Consensus 168 ~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 242 (303)
T cd05110 168 ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD-----LLEKGERLPQPPICTIDVYM 242 (303)
T ss_pred cCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHCCCCCCCCCCCCHHHHH
Confidence 2234678999999988889999999999999999997 887876532221111 11111111223345678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
++.+||..+|++||++.++++.|..+...
T Consensus 243 li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 243 VMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999998876544
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=225.44 Aligned_cols=170 Identities=18% Similarity=0.283 Sum_probs=133.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ..+.+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05114 81 MENGCLLNYLRQ-RQGKLSKDMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS 158 (256)
T ss_pred CCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcceEEEcCCCeEEECCCCCccccCCCceecc
Confidence 478999999953 3457999999999999999999999999 9999999999999999999999999987543322
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|+|||++.+..++.++|+||||+++|+|++ |+.||........... +........+...+..+.++
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~-----i~~~~~~~~~~~~~~~~~~l 233 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEM-----ISRGFRLYRPKLASMTVYEV 233 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-----HHCCCCCCCCCCCCHHHHHH
Confidence 2234568999999988888999999999999999999 7777654321111100 00001111233345789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhC
Q 018381 155 ASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+.+||..+|++||++.+++..|.
T Consensus 234 i~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 234 MYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HHHHccCCcccCcCHHHHHHhhC
Confidence 99999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-30 Score=224.71 Aligned_cols=172 Identities=22% Similarity=0.260 Sum_probs=136.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++.......+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||+++.....
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV 155 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC-ccccccCcccEEEecCCEEEecccccccccccccccee
Confidence 46899999996433367999999999999999999999999 999999999999999999999999998765432
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
....++..|+|||++.+..++.++|||||||++|+|++ |..|+........... ... .......+...+..+.
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~ 231 (257)
T cd05040 156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKK-IDK---EGERLERPEACPQDIY 231 (257)
T ss_pred cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHh---cCCcCCCCccCCHHHH
Confidence 12346788999999998889999999999999999998 9888753321111100 000 1111122334567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+++.+||..+|++|||+.++++.|.
T Consensus 232 ~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 232 NVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHHHHCCCCcccCCCHHHHHHHhc
Confidence 9999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=212.82 Aligned_cols=169 Identities=21% Similarity=0.238 Sum_probs=144.2
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC--CCccc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSYS 79 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--~~~~~ 79 (357)
++|+|+..|..+....+++.....++.|++.|+.|||.++ ||||||||+|+|++..+..||+|||-+..... -.+.+
T Consensus 105 ~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~-VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlc 183 (281)
T KOG0580|consen 105 PRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLC 183 (281)
T ss_pred CCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC-cccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeee
Confidence 6799999997666788999999999999999999999999 99999999999999999999999998775543 35789
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
||.-|++||+..+...+...|+|++|++.||++.|.+||.....+ ..+.++.... -.+|..++....++|.+|+
T Consensus 184 gt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~----etYkrI~k~~--~~~p~~is~~a~dlI~~ll 257 (281)
T KOG0580|consen 184 GTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS----ETYKRIRKVD--LKFPSTISGGAADLISRLL 257 (281)
T ss_pred cccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH----HHHHHHHHcc--ccCCcccChhHHHHHHHHh
Confidence 999999999999999999999999999999999999998765322 2222222222 2345678889999999999
Q ss_pred cCCCCCCCCHHHHHHHhC
Q 018381 160 QYEPRERPNAKSLVASLT 177 (357)
Q Consensus 160 ~~~p~~Rps~~~v~~~l~ 177 (357)
.++|.+|.+..+++.|-.
T Consensus 258 ~~~p~~r~~l~~v~~hpw 275 (281)
T KOG0580|consen 258 VKNPIERLALTEVMDHPW 275 (281)
T ss_pred ccCccccccHHHHhhhHH
Confidence 999999999999998843
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-31 Score=239.32 Aligned_cols=166 Identities=20% Similarity=0.208 Sum_probs=132.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
+++|+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 78 ~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 78 MSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYD-IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred CCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence 47899999985 4567999999999999999999999999 99999999999999999999999999875322 22
Q ss_pred ccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCC-hhhHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS-NDDGTELVRL 154 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 154 (357)
...||+.|+|||++.+. .++.++|||||||++|+|++|+.||.......+.... ..... .++ ...++.+.++
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i----~~~~~--~~~~~~~~~~~~~l 228 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNI----AFGKV--RFPKNVLSDEGRQF 228 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHH----HcCCC--CCCCccCCHHHHHH
Confidence 45689999999998764 4788999999999999999999998764322211110 00000 111 2346789999
Q ss_pred HHHhccCCCCCCC----CHHHHHHH
Q 018381 155 ASRCLQYEPRERP----NAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rp----s~~~v~~~ 175 (357)
|.+||..||++|| ++.++++|
T Consensus 229 i~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 229 VKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred HHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 9999999999998 57777775
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=239.80 Aligned_cols=170 Identities=18% Similarity=0.236 Sum_probs=129.9
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC-----CCc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-----GKS 77 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-----~~~ 77 (357)
+|+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 166 ~~~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~ylH~~~-IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~ 242 (391)
T PHA03212 166 KTDLYCYLA--AKRNIAICDILAIERSVLRAIQYLHENR-IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYG 242 (391)
T ss_pred CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHhEEEcCCCCEEEEeCCccccccccccccccc
Confidence 467888884 4567999999999999999999999999 99999999999999999999999999874322 123
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchh--------Hhh----h--cC-----------ccc
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL--------DLI----R--GK-----------NFL 132 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~--------~~~----~--~~-----------~~~ 132 (357)
..||+.|+|||++.+..++.++|||||||++|||++|+.|+..... ..+ . +. ...
T Consensus 243 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~ 322 (391)
T PHA03212 243 WAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLD 322 (391)
T ss_pred ccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHH
Confidence 5789999999999988899999999999999999999977653210 000 0 00 000
Q ss_pred ----ccccccc-----CCCC--ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 133 ----MLMDSCL-----EGHF--SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 133 ----~~~~~~~-----~~~~--~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....... +..+ ....+.++.++|.+||+.||.+|||+.+++.+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 323 EIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000 0000 01346689999999999999999999999986
|
|
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-30 Score=225.82 Aligned_cols=177 Identities=16% Similarity=0.200 Sum_probs=139.7
Q ss_pred CCCCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC--
Q 018381 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 76 (357)
+++|+|.+++.. .....+++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd08229 84 ADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred cCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEECcchhhhccccCCcc
Confidence 468899998852 23467999999999999999999999999 9999999999999999999999999987654322
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|+|||++.+..++.++|+||||+++|+|++|..||.....+...... ...........+...++.+.++
T Consensus 163 ~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l 240 (267)
T cd08229 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK--KIEQCDYPPLPSDHYSEELRQL 240 (267)
T ss_pred cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh--hhhcCCCCCCCcccccHHHHHH
Confidence 346788999999998888899999999999999999999987643222111110 0001111111123467789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
+.+||..+|++|||+.+|++.++++.
T Consensus 241 i~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 241 VNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 99999999999999999999887653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=228.57 Aligned_cols=170 Identities=17% Similarity=0.208 Sum_probs=138.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-CeEEecCCcccccCCCCccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDGKSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~~~~ 79 (357)
++||+|.+++. .+..+++.+++.++.|+++||.|||+.+ ++||||||+||+++.++ .++|+|||+++.........
T Consensus 91 ~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 167 (267)
T PHA03390 91 IKDGDLFDLLK--KEGKLSEAEVKKIIRQLVEALNDLHKHN-IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYD 167 (267)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCC
Confidence 47899999995 3348999999999999999999999999 99999999999999988 99999999988776666677
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
++..|+|||++.+..++.++|+||||+++|+|++|+.||.......+....+...... ........++.+.++|.+||
T Consensus 168 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l 245 (267)
T PHA03390 168 GTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK--KLPFIKNVSKNANDFVQSML 245 (267)
T ss_pred CCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc--cCCcccccCHHHHHHHHHHh
Confidence 8999999999998889999999999999999999999886432221111111111111 11233356788999999999
Q ss_pred cCCCCCCCC-HHHHHHH
Q 018381 160 QYEPRERPN-AKSLVAS 175 (357)
Q Consensus 160 ~~~p~~Rps-~~~v~~~ 175 (357)
+.+|.+||+ ++++++|
T Consensus 246 ~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 246 KYNINYRLTNYNEIIKH 262 (267)
T ss_pred ccChhhCCchHHHHhcC
Confidence 999999995 6999876
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=226.06 Aligned_cols=170 Identities=22% Similarity=0.292 Sum_probs=134.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||.++......
T Consensus 81 ~~~~~l~~~i~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05113 81 MSNGCLLNYLRE-HGKRFQPSQLLEMCKDVCEGMAYLESKQ-FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS 158 (256)
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence 468999999953 3447999999999999999999999999 9999999999999999999999999987544322
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|++||++.+..++.++|||||||++|+|++ |..||............ ........+...+..+.++
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l 233 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV-----SQGLRLYRPHLASEKVYAI 233 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH-----hcCCCCCCCCCCCHHHHHH
Confidence 1234567999999988889999999999999999998 88776543222111110 0111111233356789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhC
Q 018381 155 ASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+.+||..+|.+||++.+++..|+
T Consensus 234 i~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 234 MYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHcCCCcccCCCHHHHHHhhC
Confidence 99999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-31 Score=238.34 Aligned_cols=166 Identities=22% Similarity=0.268 Sum_probs=134.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ....+++.++..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 80 ~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~ 156 (318)
T cd05582 80 LRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY 156 (318)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCcee
Confidence 47899999994 4567999999999999999999999999 999999999999999999999999998765433 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||........... .... ...++...++.+.++|.
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~li~ 230 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTM----ILKA--KLGMPQFLSPEAQSLLR 230 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHH----HHcC--CCCCCCCCCHHHHHHHH
Confidence 45689999999999988889999999999999999999999865422211111 1111 11234456788999999
Q ss_pred HhccCCCCCCCCH-----HHHHHH
Q 018381 157 RCLQYEPRERPNA-----KSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~-----~~v~~~ 175 (357)
+||+.||.+||++ .+++.+
T Consensus 231 ~~l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 231 ALFKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred HHhhcCHhHcCCCCCCCHHHHhCC
Confidence 9999999999994 555544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=233.19 Aligned_cols=171 Identities=17% Similarity=0.191 Sum_probs=128.1
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CCcc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~ 78 (357)
+|+|.+++. ...+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ....
T Consensus 86 ~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 163 (303)
T cd07869 86 HTDLCQYMD-KHPGGLHPENVKLFLFQLLRGLSYIHQRY-ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNE 163 (303)
T ss_pred CcCHHHHHH-hCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCC
Confidence 467888874 24567999999999999999999999999 99999999999999999999999999874432 1234
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchh--Hhhhc------Cc----c------cccccccc
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL--DLIRG------KN----F------LMLMDSCL 139 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~--~~~~~------~~----~------~~~~~~~~ 139 (357)
.+|+.|+|||++.+ ..++.++|||||||++|+|++|..||..... ..... .. + ........
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (303)
T cd07869 164 VVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERF 243 (303)
T ss_pred cccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccc
Confidence 67899999999865 4578899999999999999999998865311 00000 00 0 00000000
Q ss_pred CCCCC---------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 140 EGHFS---------NDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 140 ~~~~~---------~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....+ ...+..+.+++.+||+.||.+|||+.++++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 244 TLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00000 0123578899999999999999999999986
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-30 Score=227.09 Aligned_cols=176 Identities=15% Similarity=0.182 Sum_probs=139.3
Q ss_pred CCCCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC--
Q 018381 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 76 (357)
+++|+|.+++.. .....+++.+++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~ 162 (267)
T cd08228 84 ADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred cCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCCHHHEEEcCCCCEEECccccceeccchhHH
Confidence 468899988842 23456899999999999999999999999 9999999999999999999999999987654322
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccccccc-ccCCCCChhhHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS-CLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 153 (357)
...+++.|+|||.+.+..++.++|+||||+++|+|++|+.|+.....+... ....+.. ......+...+..+.+
T Consensus 163 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd08228 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS---LCQKIEQCDYPPLPTEHYSEKLRE 239 (267)
T ss_pred HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHH---HHHHHhcCCCCCCChhhcCHHHHH
Confidence 346788999999998888899999999999999999999987654221111 0011111 1111122345678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
+|.+||..+|++||++.++++.|+.++
T Consensus 240 li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 240 LVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 999999999999999999999988754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=226.07 Aligned_cols=169 Identities=18% Similarity=0.232 Sum_probs=137.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++.......+++.+++.++.|++.|+.|||+++ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~-i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH-ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence 47899999996544567999999999999999999999999 999999999999999999999999998755432 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...+++.|+|||++.+..++.++|+||||+++++|++|+.||.......... ..... .....+...++.+.+++.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~li~ 235 (257)
T cd08223 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVY----RIIEG-KLPPMPKDYSPELGELIA 235 (257)
T ss_pred cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH----HHHhc-CCCCCccccCHHHHHHHH
Confidence 3467899999999998888999999999999999999998876432221111 11111 111234456788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|++||++.+++++
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 236 TMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHhccCcccCCCHHHHhcC
Confidence 9999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=228.73 Aligned_cols=177 Identities=20% Similarity=0.325 Sum_probs=136.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.......
T Consensus 89 ~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 166 (284)
T cd05081 89 LPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSKR-YVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYK 166 (284)
T ss_pred cCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHhhEEECCCCeEEECCCcccccccCCCccee
Confidence 478999999942 3457999999999999999999999999 99999999999999999999999999886543321
Q ss_pred ----cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhh---cCc--------cccccccccCCC
Q 018381 78 ----YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR---GKN--------FLMLMDSCLEGH 142 (357)
Q Consensus 78 ----~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~---~~~--------~~~~~~~~~~~~ 142 (357)
..++..|+|||++.+..++.++|+|||||++|||++|..++......... ... ............
T Consensus 167 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (284)
T cd05081 167 VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLP 246 (284)
T ss_pred ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCC
Confidence 12234699999998888999999999999999999987664332111110 000 001111111222
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
.+..++..+.++|.+||..+|++|||+.+|++.|+.+
T Consensus 247 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 247 APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 3445678899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=227.17 Aligned_cols=169 Identities=17% Similarity=0.236 Sum_probs=136.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++.....
T Consensus 86 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 162 (263)
T cd06625 86 MPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGT 162 (263)
T ss_pred CCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceeccccccccc
Confidence 47899999985 4567999999999999999999999999 999999999999999999999999998754321
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
....++..|+|||++.+..++.++||||||+++|+|++|+.||........ .............+...+..+.+
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 238 (263)
T cd06625 163 GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA----IFKIATQPTNPQLPSHVSPDARN 238 (263)
T ss_pred cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH----HHHHhccCCCCCCCccCCHHHHH
Confidence 234577899999999988899999999999999999999988754311110 01111111222345566788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 018381 154 LASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l 176 (357)
+|.+||..+|++|||+.+++.+.
T Consensus 239 li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 239 FLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred HHHHHhhcCcccCCCHHHHhhCC
Confidence 99999999999999999999873
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-30 Score=233.63 Aligned_cols=177 Identities=21% Similarity=0.313 Sum_probs=139.2
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
+++|+|.+++..+. ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+||
T Consensus 100 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nill~~~~~~kL~Df 178 (334)
T cd05100 100 ASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK-CIHRDLAARNVLVTEDNVMKIADF 178 (334)
T ss_pred CCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCc
Confidence 46899999985321 235899999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..||.......... .+....
T Consensus 179 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~-----~~~~~~ 253 (334)
T cd05100 179 GLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK-----LLKEGH 253 (334)
T ss_pred ccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH-----HHHcCC
Confidence 9987554322 1223467999999998889999999999999999998 777765432222111 111111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
....+..++..+.+++.+||..+|++|||+.+++..|+.+....
T Consensus 254 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 254 RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 22234456678999999999999999999999999998887543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-30 Score=237.91 Aligned_cols=170 Identities=17% Similarity=0.182 Sum_probs=133.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 83 ~~~~~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~-i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~ 160 (330)
T cd05601 83 QPGGDLLSLLNR-YEDQFDEDMAQFYLAELVLAIHSVHQMG-YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS 160 (330)
T ss_pred CCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEcccCchHheEECCCCCEEeccCCCCeECCCCCceee
Confidence 479999999953 3468999999999999999999999999 9999999999999999999999999997654332
Q ss_pred -ccccCCCCCCccccc------cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHH
Q 018381 77 -SYSTNLAFTPPEYLR------TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 149 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~------~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
...||+.|+|||++. ...++.++|||||||++|+|++|+.||........... +... ......+.....+.
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~-i~~~-~~~~~~~~~~~~~~ 238 (330)
T cd05601 161 KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNN-IMNF-QRFLKFPEDPKVSS 238 (330)
T ss_pred ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHH-HHcC-CCccCCCCCCCCCH
Confidence 236899999999986 45677899999999999999999999865422111100 0000 00111111224567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+.+++.+||. +|.+|||+.+++.|
T Consensus 239 ~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 239 DFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred HHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 89999999997 99999999999986
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-30 Score=228.56 Aligned_cols=171 Identities=20% Similarity=0.295 Sum_probs=135.7
Q ss_pred CCCCchhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCccccc
Q 018381 1 MPNETLSKHLFHWE--------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 72 (357)
+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~di~p~nill~~~~~~kl~dfg~~~~~ 169 (277)
T cd05032 91 MAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK-FVHRDLAARNCMVAEDLTVKIGDFGMTRDI 169 (277)
T ss_pred CCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccChheEEEcCCCCEEECCcccchhh
Confidence 36899999985321 235789999999999999999999999 999999999999999999999999998754
Q ss_pred CCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCCh
Q 018381 73 RDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 145 (357)
Q Consensus 73 ~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
... ....++..|+|||.+.++.++.++|||||||++||+++ |..|+......... +..........+.
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~ 244 (277)
T cd05032 170 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVL-----KFVIDGGHLDLPE 244 (277)
T ss_pred ccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHH-----HHHhcCCCCCCCC
Confidence 332 23345788999999988889999999999999999998 87776543222111 1111111123344
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
.++..+.++|.+||..+|++|||+.+++..|+
T Consensus 245 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 245 NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 56788999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-30 Score=233.30 Aligned_cols=167 Identities=19% Similarity=0.202 Sum_probs=135.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
+|||++.-+|. ..+.|++..+..++.+++.|+.-+|..| +|||||||+|+|||..|++||+||||+.....
T Consensus 223 lPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~g-yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~ 299 (550)
T KOG0605|consen 223 LPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLG-YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIES 299 (550)
T ss_pred cCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcC-cccccCChhheeecCCCCEeeccccccchhhhhhhhhh
Confidence 69999999995 6789999999999999999999999999 99999999999999999999999999842100
Q ss_pred -------------------C-----C---------------------ccccCCCCCCccccccCCCCccccccchHHHHH
Q 018381 75 -------------------G-----K---------------------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL 109 (357)
Q Consensus 75 -------------------~-----~---------------------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 109 (357)
. . +.+|||-|||||++.+.+|+..+|-||||||+|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Imy 379 (550)
T KOG0605|consen 300 YRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMY 379 (550)
T ss_pred hcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHH
Confidence 0 0 136899999999999999999999999999999
Q ss_pred HHHhCCCCCCcchhHhhhcCccccccc--cccCCCCChhhHHHHHHHHHHhccCCCCCCC---CHHHHHHH
Q 018381 110 DLLSGKHIPPSHALDLIRGKNFLMLMD--SCLEGHFSNDDGTELVRLASRCLQYEPRERP---NAKSLVAS 175 (357)
Q Consensus 110 el~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp---s~~~v~~~ 175 (357)
||+.|-+||........- .+++. ..+..+....++++..+||.+||. ||++|. .+.||.+|
T Consensus 380 EmLvGyPPF~s~tp~~T~----rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 380 EMLVGYPPFCSETPQETY----RKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKH 445 (550)
T ss_pred HHHhCCCCCCCCCHHHHH----HHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcC
Confidence 999999998876433221 12221 122222233456889999999998 999994 68888776
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-30 Score=236.66 Aligned_cols=118 Identities=18% Similarity=0.224 Sum_probs=105.3
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC--CeEEecCCcccccCCC-Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG--NPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
.-+|+++|...+-..|+...+..|+.||+.||.+||+.+ |||+||||+||||-+-+ .+||+|||.+...... -+++
T Consensus 271 ~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~-IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYi 349 (586)
T KOG0667|consen 271 STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG-IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYI 349 (586)
T ss_pred hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCChhheeeccCCcCceeEEecccccccCCcceeee
Confidence 357999997666678999999999999999999999999 99999999999997543 6999999999866543 3677
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH 121 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~ 121 (357)
.+..|+|||++.|.+|+.+.||||||||+.||++|.+.|++.
T Consensus 350 QSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 350 QSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred eccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 889999999999999999999999999999999998877765
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-30 Score=238.82 Aligned_cols=169 Identities=18% Similarity=0.165 Sum_probs=132.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. .++.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (364)
T cd05599 83 LPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKLG-YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEF 159 (364)
T ss_pred CCCcHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEeecccceeccccccccc
Confidence 47899999995 4567999999999999999999999999 999999999999999999999999998643211
Q ss_pred -------------------------------------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCC
Q 018381 76 -------------------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP 118 (357)
Q Consensus 76 -------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~ 118 (357)
.+..||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf 239 (364)
T cd05599 160 YRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPF 239 (364)
T ss_pred cccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCC
Confidence 0235899999999999888999999999999999999999998
Q ss_pred CcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC---HHHHHHH
Q 018381 119 PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN---AKSLVAS 175 (357)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps---~~~v~~~ 175 (357)
........... +.. ....+..+.....++.+.++|.+|+. +|.+|++ +.+++.|
T Consensus 240 ~~~~~~~~~~~-i~~-~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 240 CSDNPQETYRK-IIN-WKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCHHHHHHH-HHc-CCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 75422111100 000 00111111112356789999999996 9999987 9999887
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-30 Score=228.90 Aligned_cols=177 Identities=19% Similarity=0.372 Sum_probs=135.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 167 (284)
T cd05079 90 LPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYT 167 (284)
T ss_pred cCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccchheEEEcCCCCEEECCCccccccccCcccee
Confidence 478999999942 3457899999999999999999999999 9999999999999999999999999987554322
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhh------cC-c---cccccccccCCCC
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR------GK-N---FLMLMDSCLEGHF 143 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~------~~-~---~~~~~~~~~~~~~ 143 (357)
...++..|+|||++.+..++.++|||||||++|+|++++.|.......... .. . ...........+.
T Consensus 168 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (284)
T cd05079 168 VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPR 247 (284)
T ss_pred ecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCC
Confidence 234567899999998888999999999999999999987654321110000 00 0 0000011111222
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
+..++..+.+|+.+||..+|++|||+.++++.|+.+
T Consensus 248 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 248 PPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 345678899999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-30 Score=225.38 Aligned_cols=172 Identities=25% Similarity=0.369 Sum_probs=138.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC-ccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-SYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~ 79 (357)
+++|+|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++...... ...
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~ 160 (256)
T cd05039 82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGK 160 (256)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccchhcccceEEEeCCCCEEEcccccccccccccccCC
Confidence 46899999996544458999999999999999999999999 9999999999999999999999999988664332 223
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
.+..|+|||++.++.++.++|+||||+++|+|++ |..||.......... .+........+...++.+.++|.+|
T Consensus 161 ~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~~ 235 (256)
T cd05039 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP-----HVEKGYRMEAPEGCPPEVYKVMKDC 235 (256)
T ss_pred CcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-----HHhcCCCCCCccCCCHHHHHHHHHH
Confidence 4567999999988889999999999999999997 887775443222211 1111112223445678899999999
Q ss_pred ccCCCCCCCCHHHHHHHhCc
Q 018381 159 LQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~l~~ 178 (357)
|..+|++|||+.++++.|+.
T Consensus 236 l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 236 WELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred hccChhhCcCHHHHHHHHhc
Confidence 99999999999999999865
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-30 Score=231.33 Aligned_cols=171 Identities=20% Similarity=0.308 Sum_probs=130.1
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
.|+|.+++.. .+..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 86 ~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~ 163 (288)
T cd07871 86 DSDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRK-ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNE 163 (288)
T ss_pred CcCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCc
Confidence 3688888842 4556899999999999999999999999 999999999999999999999999998754322 234
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhh----------------c----Ccccccccc
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR----------------G----KNFLMLMDS 137 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~----------------~----~~~~~~~~~ 137 (357)
.+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... . ..+....-+
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (288)
T cd07871 164 VVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFP 243 (288)
T ss_pred eecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccC
Confidence 67899999999875 56788999999999999999999888654211100 0 000000000
Q ss_pred ccCC----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 CLEG----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 ~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.... ......+.++.++|.+||+.||.+|||+.+++.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 244 QYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred ccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 0012345778999999999999999999999876
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-30 Score=238.32 Aligned_cols=167 Identities=19% Similarity=0.196 Sum_probs=131.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ...+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 125 ~~gg~L~~~l~---~~~~~~~~~~~~~~qil~aL~~LH~~~-IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~ 200 (370)
T cd05621 125 MPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRC 200 (370)
T ss_pred CCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEEecccceecccCCceec
Confidence 57999999993 456899999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCCCCCCccccccC----CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCC--hhhHH
Q 018381 76 KSYSTNLAFTPPEYLRTG----RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS--NDDGT 149 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 149 (357)
.+..||+.|+|||++.+. .++.++|+|||||++|+|++|+.||......... ...........++ ...+.
T Consensus 201 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~----~~i~~~~~~~~~p~~~~~s~ 276 (370)
T cd05621 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTY----SKIMDHKNSLNFPEDVEISK 276 (370)
T ss_pred ccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCcccCCCCcccCCH
Confidence 245689999999998753 3678999999999999999999998754321111 1111111111122 23567
Q ss_pred HHHHHHHHhccCCCCC--CCCHHHHHHH
Q 018381 150 ELVRLASRCLQYEPRE--RPNAKSLVAS 175 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~--Rps~~~v~~~ 175 (357)
.+.+++.+||..++.+ |+++.++++|
T Consensus 277 ~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 277 HAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred HHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 8999999999866544 8899999998
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-30 Score=226.62 Aligned_cols=172 Identities=22% Similarity=0.259 Sum_probs=136.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. ..+.+++.++..++.|++.|+.|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 88 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 165 (268)
T cd05063 88 MENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMN-YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTY 165 (268)
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEEcCCCcEEECCCccceecccccccce
Confidence 478999999953 3467999999999999999999999999 99999999999999999999999999875543211
Q ss_pred ----cccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 78 ----YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 78 ----~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...+..|+|||++.+..++.++|||||||++|||++ |..|+......... ..+......+.+..++..+.
T Consensus 166 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~ 240 (268)
T cd05063 166 TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVM-----KAINDGFRLPAPMDCPSAVY 240 (268)
T ss_pred eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHH-----HHHhcCCCCCCCCCCCHHHH
Confidence 112457999999988888999999999999999997 88887543221111 11111122223445678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
+++.+||..+|++||++.+|++.|..+
T Consensus 241 ~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 241 QLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-30 Score=228.50 Aligned_cols=175 Identities=19% Similarity=0.237 Sum_probs=138.2
Q ss_pred CCCCchhhhhccCCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC
Q 018381 1 MPNETLSKHLFHWEN------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 74 (357)
+++|+|.+++..... ..+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++....
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~ 169 (280)
T cd05043 91 MNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG-VIHKDIAARNCVIDEELQVKITDNALSRDLFP 169 (280)
T ss_pred CCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCHhhEEEcCCCcEEECCCCCcccccC
Confidence 368999999853221 56999999999999999999999999 99999999999999999999999999985533
Q ss_pred CC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhh
Q 018381 75 GK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 147 (357)
Q Consensus 75 ~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (357)
.. ...++..|+|||++.+..++.++|||||||++|++++ |+.||.......+. ...........+..+
T Consensus 170 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~ 244 (280)
T cd05043 170 MDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMA-----AYLKDGYRLAQPINC 244 (280)
T ss_pred CceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHH-----HHHHcCCCCCCCCcC
Confidence 21 2345678999999988888999999999999999999 88877543211111 111111111223446
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 148 GTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 148 ~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
++.+.+++.+||..+|++|||+.+++..|..+..
T Consensus 245 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 245 PDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 7789999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-30 Score=238.19 Aligned_cols=165 Identities=19% Similarity=0.323 Sum_probs=136.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC----CCC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~ 76 (357)
+.||++..++ +.+.|++..+..++..|+.||.|||+++ ||+||||.+|||||.+|.+||+|||+++... ...
T Consensus 451 ~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~-IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~Ts 526 (694)
T KOG0694|consen 451 VAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG-IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTS 526 (694)
T ss_pred cCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC-ceeeecchhheEEcccCcEEecccccccccCCCCCccc
Confidence 3577744433 5689999999999999999999999999 9999999999999999999999999998543 345
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+++|||.|||||++.++.|+.+.|=|||||++|||+.|..||+++..+..-.. ++. ....+|..++.+...|++
T Consensus 527 TfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~Fds----I~~--d~~~yP~~ls~ea~~il~ 600 (694)
T KOG0694|consen 527 TFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDS----IVN--DEVRYPRFLSKEAIAIMR 600 (694)
T ss_pred cccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH----Hhc--CCCCCCCcccHHHHHHHH
Confidence 78999999999999999999999999999999999999999986533322111 111 112357778899999999
Q ss_pred HhccCCCCCCCC-----HHHHHHH
Q 018381 157 RCLQYEPRERPN-----AKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps-----~~~v~~~ 175 (357)
++|.++|++|.- +.+|..|
T Consensus 601 ~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 601 RLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred HHhccCcccccCCCCCCchhhhhC
Confidence 999999999954 5666654
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-30 Score=229.94 Aligned_cols=172 Identities=20% Similarity=0.324 Sum_probs=136.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC---c
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---S 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~ 77 (357)
++||+|.+++.......+++.++..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++....... .
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 160 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence 47899999986444557999999999999999999999999 9999999999999999999999999987554332 3
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
..|+..|+|||++.+..++.++|+|||||++|+|++|..||......... ........ .....++...++.+.+++.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05630 161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVK-EVQEEYSEKFSPDARSLCKM 238 (285)
T ss_pred CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-HHHHhhhh-hhhhhcCccCCHHHHHHHHH
Confidence 46899999999999888999999999999999999999988653211000 00001110 11112344566789999999
Q ss_pred hccCCCCCCCC-----HHHHHHH
Q 018381 158 CLQYEPRERPN-----AKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rps-----~~~v~~~ 175 (357)
||+.||.+||| +.++++|
T Consensus 239 ~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 239 LLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred HhhcCHHHccCCCCCchHHHHcC
Confidence 99999999999 8899886
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-30 Score=237.35 Aligned_cols=170 Identities=20% Similarity=0.188 Sum_probs=131.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 83 ~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 83 IPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMG-FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 57999999995 4567999999999999999999999999 99999999999999999999999999753210
Q ss_pred ---------------------------------------------CCccccCCCCCCccccccCCCCccccccchHHHHH
Q 018381 75 ---------------------------------------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL 109 (357)
Q Consensus 75 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 109 (357)
..+..||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~ 239 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILF 239 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHH
Confidence 01346899999999999888999999999999999
Q ss_pred HHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh--ccCCCCCCCCHHHHHHH
Q 018381 110 DLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC--LQYEPRERPNAKSLVAS 175 (357)
Q Consensus 110 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c--l~~~p~~Rps~~~v~~~ 175 (357)
||++|..||............ .. .......+.....++++.++|.+| +..++..|+++.+++.|
T Consensus 240 elltG~~Pf~~~~~~~~~~~i-~~-~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 240 EMLVGQPPFLAPTPTETQLKV-IN-WENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHhCCCCCcCCCHHHHHHHH-Hc-cccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 999999998654322111110 00 011111111224567899999884 45556669999999987
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=227.29 Aligned_cols=176 Identities=17% Similarity=0.235 Sum_probs=133.1
Q ss_pred CCCCchhhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccc
Q 018381 1 MPNETLSKHLFHWE---------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 71 (357)
Q Consensus 1 ~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~ 71 (357)
+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++.
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 179 (296)
T cd05051 101 MENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN-FVHRDLATRNCLVGKNYTIKIADFGMSRN 179 (296)
T ss_pred CCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhceeecCCCceEEccccceee
Confidence 36889999985321 136899999999999999999999999 99999999999999999999999999875
Q ss_pred cCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh--CCCCCCcchhHh-hhcC-ccccccccccCC
Q 018381 72 SRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS--GKHIPPSHALDL-IRGK-NFLMLMDSCLEG 141 (357)
Q Consensus 72 ~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~--g~~~~~~~~~~~-~~~~-~~~~~~~~~~~~ 141 (357)
.... ....+++.|+|||++.++.++.++|||||||++|||++ |..|+....... +... ............
T Consensus 180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (296)
T cd05051 180 LYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYL 259 (296)
T ss_pred cccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccC
Confidence 4322 22345678999999988889999999999999999998 444543321111 1110 000000111111
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 142 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 142 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
..+..++.++.+++.+||+.+|++|||+.+|++.|.
T Consensus 260 ~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 260 PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 223445678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-30 Score=236.94 Aligned_cols=167 Identities=17% Similarity=0.205 Sum_probs=126.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 154 ~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 226 (353)
T PLN00034 154 MDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRH-IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCN 226 (353)
T ss_pred CCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEcccccceeccccccccc
Confidence 355666433 24567888999999999999999999 999999999999999999999999998765432 3
Q ss_pred ccccCCCCCCcccccc-----CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 77 SYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
...||..|+|||++.. ...+.++|||||||++|||++|+.||.......+... ............+..++.++
T Consensus 227 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l 304 (353)
T PLN00034 227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASL--MCAICMSQPPEAPATASREF 304 (353)
T ss_pred ccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHH--HHHHhccCCCCCCCccCHHH
Confidence 4578999999998843 2235689999999999999999998863211111000 00000011122344567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 152 VRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
.+||.+||..||++|||+.++++|-
T Consensus 305 ~~li~~~l~~~P~~Rpt~~ell~hp 329 (353)
T PLN00034 305 RHFISCCLQREPAKRWSAMQLLQHP 329 (353)
T ss_pred HHHHHHHccCChhhCcCHHHHhcCc
Confidence 9999999999999999999999983
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-30 Score=223.48 Aligned_cols=168 Identities=23% Similarity=0.349 Sum_probs=132.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-------CeEEecCCcccccC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-------NPRLSCFGLMKNSR 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-------~~kl~Dfg~~~~~~ 73 (357)
+++|+|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+||+++.++ .+||+|||++....
T Consensus 82 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~ 159 (259)
T cd05037 82 VKFGPLDVFLHR-EKNNVSLHWKLDVAKQLASALHYLEDKK-LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVL 159 (259)
T ss_pred CCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhhCC-eecccCccceEEEecCccccCCceeEEeCCCCcccccc
Confidence 478999999953 3347999999999999999999999999 99999999999999887 79999999998766
Q ss_pred CCCccccCCCCCCccccccC--CCCccccccchHHHHHHHHhC-CCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 74 DGKSYSTNLAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSG-KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 74 ~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
......++..|+|||++.+. .++.++|+|||||++|+|++| ..|+........ ..... . ....+......
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~--~~~~~---~--~~~~~~~~~~~ 232 (259)
T cd05037 160 SREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK--ERFYQ---D--QHRLPMPDCAE 232 (259)
T ss_pred cccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH--HHHHh---c--CCCCCCCCchH
Confidence 65566678899999999876 688899999999999999996 444432211100 00000 0 01112222378
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+.++|.+||..+|.+|||+.++++.|+
T Consensus 233 ~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 233 LANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-30 Score=225.24 Aligned_cols=171 Identities=19% Similarity=0.270 Sum_probs=135.3
Q ss_pred CCCCchhhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-----CeEEecCCccc
Q 018381 1 MPNETLSKHLFHW-----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-----NPRLSCFGLMK 70 (357)
Q Consensus 1 ~~~gsL~~~l~~~-----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-----~~kl~Dfg~~~ 70 (357)
++||+|.+++... ....+++.+++.++.|++.||.|||+++ ++|+||||+||+++.++ .++|+|||+++
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC-cccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 4789999999542 2245899999999999999999999999 99999999999999877 89999999987
Q ss_pred ccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCC
Q 018381 71 NSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHF 143 (357)
Q Consensus 71 ~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
..... ....++..|+|||++.++.++.++|||||||++|+|++ |..||......... ..+........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~-----~~~~~~~~~~~ 234 (269)
T cd05044 160 DIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVL-----QHVTAGGRLQK 234 (269)
T ss_pred ccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHH-----HHHhcCCccCC
Confidence 54322 12345678999999998899999999999999999998 88887643221111 11111111223
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+...+..+.++|.+||..+|++||++.++++.|.
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 235 PENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred cccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 4456788999999999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-30 Score=229.50 Aligned_cols=168 Identities=18% Similarity=0.246 Sum_probs=135.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
++||+|.+++ .+..+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 99 ~~~~~L~~~~---~~~~~~~~~~~~i~~ql~~aL~~LH~~g-i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 174 (296)
T cd06654 99 LAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (296)
T ss_pred cCCCCHHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEECccccchhccccccccC
Confidence 4789999999 3457899999999999999999999999 999999999999999999999999998754332 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...+++.|+|||.+.+..++.++|+|||||++|+|++|+.||.......... ............+...+..+.++|.
T Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~ 251 (296)
T cd06654 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY---LIATNGTPELQNPEKLSAIFRDFLN 251 (296)
T ss_pred cccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH---HHhcCCCCCCCCccccCHHHHHHHH
Confidence 3467899999999988888999999999999999999999886542211100 0001111111223446678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|++||++.+++.+
T Consensus 252 ~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 252 RCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHCcCCcccCcCHHHHhhC
Confidence 9999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-30 Score=229.25 Aligned_cols=174 Identities=18% Similarity=0.289 Sum_probs=137.9
Q ss_pred CCCCchhhhhccC----------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC
Q 018381 1 MPNETLSKHLFHW----------------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 58 (357)
Q Consensus 1 ~~~gsL~~~l~~~----------------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~ 58 (357)
+++|+|.+++... ....+++.+++.++.|++.||.|||+.+ ++||||||+||+++++
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-ivH~dikp~nill~~~ 163 (290)
T cd05045 85 AKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK-LVHRDLAARNVLVAEG 163 (290)
T ss_pred cCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC-eehhhhhhheEEEcCC
Confidence 4688999987421 1246899999999999999999999999 9999999999999999
Q ss_pred CCeEEecCCcccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcc
Q 018381 59 GNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNF 131 (357)
Q Consensus 59 ~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~ 131 (357)
+.+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|+|++ |..||.......+
T Consensus 164 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~----- 238 (290)
T cd05045 164 RKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL----- 238 (290)
T ss_pred CcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHH-----
Confidence 999999999987543221 2234678999999988888999999999999999998 8877765422221
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 132 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
............+..++..+.+++.+||..+|++||++.++++.|+.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 239 FNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 1111111222334456778999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.6e-30 Score=222.48 Aligned_cols=170 Identities=25% Similarity=0.392 Sum_probs=136.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 74 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 151 (250)
T cd05085 74 VPGGDFLSFLRK-KKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSS 151 (250)
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccChheEEEcCCCeEEECCCccceeccccccccC
Confidence 478999999843 3457899999999999999999999999 9999999999999999999999999987543321
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|+|||++.++.++.++|+||||+++|++++ |..||.......... ..........+..++..+.++
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l 226 (250)
T cd05085 152 GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQARE-----QVEKGYRMSCPQKCPDDVYKV 226 (250)
T ss_pred CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCCCHHHHHH
Confidence 2234567999999998889999999999999999998 887876542222111 111112223344567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhC
Q 018381 155 ASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+.+||..+|++||++.++.+.|.
T Consensus 227 i~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 227 MQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHcccCcccCCCHHHHHHHhc
Confidence 99999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-30 Score=227.88 Aligned_cols=172 Identities=19% Similarity=0.271 Sum_probs=136.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
+++|+|.+++.......+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG 160 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence 47899999886444557999999999999999999999999 999999999999999999999999998754332 23
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
..|+..|+|||++.+..++.++|+|||||++|+|++|..||........... ....+... ...++...+..+.+|+.+
T Consensus 161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~li~~ 238 (285)
T cd05632 161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREE-VDRRVLET-EEVYSAKFSEEAKSICKM 238 (285)
T ss_pred CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHhhhcc-ccccCccCCHHHHHHHHH
Confidence 4689999999999988899999999999999999999998865422111111 11111110 112344566789999999
Q ss_pred hccCCCCCCCC-----HHHHHHH
Q 018381 158 CLQYEPRERPN-----AKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rps-----~~~v~~~ 175 (357)
||+.+|.+||+ +.+++.+
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 239 LLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred HccCCHhHcCCCcccChHHHHcC
Confidence 99999999999 7777775
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=223.51 Aligned_cols=175 Identities=18% Similarity=0.156 Sum_probs=129.8
Q ss_pred CCCCchhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHW---ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-- 75 (357)
+++|+|.+++... ....+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||+++.....
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~ 155 (269)
T cd05087 77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY 155 (269)
T ss_pred CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence 5789999999532 1235678888999999999999999999 999999999999999999999999998754322
Q ss_pred ----CccccCCCCCCccccccC-------CCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCC
Q 018381 76 ----KSYSTNLAFTPPEYLRTG-------RVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHF 143 (357)
Q Consensus 76 ----~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
....++..|+|||++.+. .++.++|+||||+++|||++ |..||.........................
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (269)
T cd05087 156 YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRL 235 (269)
T ss_pred eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCcc
Confidence 123467889999998642 35789999999999999996 988876432221111111111111111112
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
....++.+.+++.+|| .+|++|||+.+|+..|+
T Consensus 236 ~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 236 KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 2245677999999999 68999999999998875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-30 Score=227.19 Aligned_cols=170 Identities=11% Similarity=0.163 Sum_probs=133.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
+++|+|.+++.......+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++..... ..
T Consensus 101 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 179 (282)
T cd06636 101 CGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN 179 (282)
T ss_pred CCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCC
Confidence 46889999996545567999999999999999999999999 99999999999999999999999999875432 23
Q ss_pred ccccCCCCCCccccc-----cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 77 SYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
...|++.|+|||++. +..++.++|+|||||++|+|++|..||...... ...................+..+
T Consensus 180 ~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 255 (282)
T cd06636 180 TFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM----RALFLIPRNPPPKLKSKKWSKKF 255 (282)
T ss_pred cccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH----hhhhhHhhCCCCCCcccccCHHH
Confidence 456889999999885 345778999999999999999999887543211 11111111111111123456789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 018381 152 VRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.++|.+||+.||.+|||+.+++++
T Consensus 256 ~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 256 IDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred HHHHHHHhCCChhhCcCHHHHhcC
Confidence 999999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=223.73 Aligned_cols=176 Identities=18% Similarity=0.254 Sum_probs=139.5
Q ss_pred CCCCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---
Q 018381 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 75 (357)
+++|+|.+++.. ..+..+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.....
T Consensus 84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~ 162 (267)
T cd08224 84 ADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR-IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred CCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecCCcChhhEEECCCCcEEEeccceeeeccCCCcc
Confidence 478999998853 23466899999999999999999999999 999999999999999999999999998754432
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCCh-hhHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN-DDGTELVR 153 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 153 (357)
....+++.|+|||.+.+..++.++|+|||||++|+|++|+.|+.....+... ...........+.+. ..+..+.+
T Consensus 163 ~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd08224 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS---LCKKIEKCDYPPLPADHYSEELRD 239 (267)
T ss_pred cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHH---HHhhhhcCCCCCCChhhcCHHHHH
Confidence 2346788999999998888999999999999999999999887543211111 001111111112222 45678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
+|.+||..+|++|||+.+|++.|+.+.
T Consensus 240 ~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 240 LVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-30 Score=237.91 Aligned_cols=168 Identities=18% Similarity=0.220 Sum_probs=136.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCeeeCC-CCCeEEecCCcccccCC--CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRD--GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~--~~ 76 (357)
|..|+|..|+. ..+.++...+..|++||++||.|||++. ||||||||.+||+|+. .|.|||+|+|||..... ..
T Consensus 125 ~TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ak 202 (632)
T KOG0584|consen 125 FTSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAK 202 (632)
T ss_pred ccCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccc
Confidence 57899999995 5678899999999999999999999987 5999999999999975 68899999999986554 34
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+.+|||.|||||+.. ..|+...||||||++++||+|+..|+..+....-. +.++.....+..+..-..+++++||.
T Consensus 203 svIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQI---YKKV~SGiKP~sl~kV~dPevr~fIe 278 (632)
T KOG0584|consen 203 SVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQI---YKKVTSGIKPAALSKVKDPEVREFIE 278 (632)
T ss_pred eeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHH---HHHHHcCCCHHHhhccCCHHHHHHHH
Confidence 678999999999998 78999999999999999999999998755322211 12222221111122223578999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||.. ..+|||+.++|.+
T Consensus 279 kCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 279 KCLAT-KSERLSAKELLKD 296 (632)
T ss_pred HHhcC-chhccCHHHHhhC
Confidence 99999 8999999999985
|
|
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=222.83 Aligned_cols=172 Identities=20% Similarity=0.307 Sum_probs=137.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++....+..+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 160 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc
Confidence 46899999996545567899999999999999999999999 9999999999999999999999999987554322
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|+|||++.++.++.++|+|||||++|++++ |..||........... .........+...+..+.++
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 235 (260)
T cd05073 161 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA-----LERGYRMPRPENCPEELYNI 235 (260)
T ss_pred cCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHH-----HhCCCCCCCcccCCHHHHHH
Confidence 1234567999999988888999999999999999998 7877765322211110 01111112234556789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
+.+||..+|++||++.+++..|..
T Consensus 236 i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 236 MMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHcccCcccCcCHHHHHHHHhc
Confidence 999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-30 Score=238.77 Aligned_cols=169 Identities=20% Similarity=0.187 Sum_probs=132.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 83 ~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~ 159 (376)
T cd05598 83 IPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (376)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccc
Confidence 57999999995 4567999999999999999999999999 99999999999999999999999999742210
Q ss_pred -----------------------------------------CCccccCCCCCCccccccCCCCccccccchHHHHHHHHh
Q 018381 75 -----------------------------------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 113 (357)
Q Consensus 75 -----------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~ 113 (357)
.....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~ 239 (376)
T cd05598 160 YQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 239 (376)
T ss_pred cccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhh
Confidence 012468999999999998889999999999999999999
Q ss_pred CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC---CHHHHHHH
Q 018381 114 GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP---NAKSLVAS 175 (357)
Q Consensus 114 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp---s~~~v~~~ 175 (357)
|+.||............ .........+.....++.+.++|.+|+ .+|.+|+ ++.+++.|
T Consensus 240 G~~Pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 240 GQPPFLADTPAETQLKV--INWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred CCCCCCCCCHHHHHHHH--hccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99998754322111110 000111111122345678889999976 5999999 89999987
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=224.33 Aligned_cols=175 Identities=16% Similarity=0.174 Sum_probs=128.2
Q ss_pred CCCCchhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWE---NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-- 75 (357)
+++|+|.+++.... ....++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 155 (269)
T cd05042 77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY 155 (269)
T ss_pred CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-EecccccHhheEecCCCcEEEeccccccccccchh
Confidence 47899999995422 234578889999999999999999999 999999999999999999999999998653221
Q ss_pred ----CccccCCCCCCcccccc-------CCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCC
Q 018381 76 ----KSYSTNLAFTPPEYLRT-------GRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHF 143 (357)
Q Consensus 76 ----~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
....+++.|+|||++.. ..++.++|||||||++|||++ |..|+.........................
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (269)
T cd05042 156 YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQL 235 (269)
T ss_pred eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcc
Confidence 22345677999998753 346779999999999999999 566655432111111111111111111223
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+...+..+.+++..|| .||++|||+.+|++.|.
T Consensus 236 ~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 236 DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 3456678889999999 59999999999998763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=224.27 Aligned_cols=168 Identities=24% Similarity=0.335 Sum_probs=130.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-------CeEEecCCcccccC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-------NPRLSCFGLMKNSR 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-------~~kl~Dfg~~~~~~ 73 (357)
+++|+|..++.. ..+.+++..++.++.||+.||.|||+++ |+||||||+|||++..+ .+|++|||++....
T Consensus 98 ~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~ 175 (274)
T cd05076 98 VEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKN-LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTAL 175 (274)
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCC-ccCCCCCcccEEEeccCcccCccceeeecCCccccccc
Confidence 578999999843 4568999999999999999999999999 99999999999997543 37999999987655
Q ss_pred CCCccccCCCCCCcccccc-CCCCccccccchHHHHHHHH-hCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 74 DGKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLL-SGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 74 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
......++..|+|||.+.+ ..++.++|||||||++|||+ +|..|+......... ...... ...+....+.+
T Consensus 176 ~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~ 248 (274)
T cd05076 176 SREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-----RFYEKK--HRLPEPSCKEL 248 (274)
T ss_pred cccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH-----HHHHhc--cCCCCCCChHH
Confidence 5455567889999998875 55789999999999999995 677776543211110 011111 11222334579
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 152 VRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
.++|.+||..+|++|||+.++++.|.
T Consensus 249 ~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 249 ATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHHHHcccChhhCcCHHHHHHhhC
Confidence 99999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-30 Score=237.23 Aligned_cols=169 Identities=16% Similarity=0.147 Sum_probs=130.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~g-ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~ 159 (360)
T cd05627 83 LPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQLG-FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEF 159 (360)
T ss_pred CCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEeeccCCccccccccccc
Confidence 57999999995 4567999999999999999999999999 999999999999999999999999998643211
Q ss_pred ----------------------------------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcc
Q 018381 76 ----------------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH 121 (357)
Q Consensus 76 ----------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~ 121 (357)
.+..||+.|+|||++.+..++.++|+|||||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~ 239 (360)
T cd05627 160 YRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (360)
T ss_pred ccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCC
Confidence 1246899999999999989999999999999999999999998654
Q ss_pred hhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC---HHHHHHH
Q 018381 122 ALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN---AKSLVAS 175 (357)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps---~~~v~~~ 175 (357)
......... .. ....+..+.....++++.++|.+|+. +|.+|++ +.+++.|
T Consensus 240 ~~~~~~~~i-~~-~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 240 TPQETYRKV-MN-WKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CHHHHHHHH-Hc-CCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 322211110 00 00001101111256789999998774 9999984 7788776
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-30 Score=236.78 Aligned_cols=169 Identities=20% Similarity=0.186 Sum_probs=130.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||++.....
T Consensus 83 ~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~al~~lH~~~-ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 83 IPGGDMMSLLI--RMGIFPEDLARFYIAELTCAVESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 57999999995 3467999999999999999999999999 99999999999999999999999999752210
Q ss_pred ---------------------------------------------CCccccCCCCCCccccccCCCCccccccchHHHHH
Q 018381 75 ---------------------------------------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL 109 (357)
Q Consensus 75 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 109 (357)
..+..||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 01246899999999999888999999999999999
Q ss_pred HHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC---HHHHHHH
Q 018381 110 DLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN---AKSLVAS 175 (357)
Q Consensus 110 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps---~~~v~~~ 175 (357)
||++|+.||............ .. .......+.....++++.++|.+|+ .+|.+|++ +.+++.|
T Consensus 240 elltG~~Pf~~~~~~~~~~~i-~~-~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKV-IN-WQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHH-Hc-cCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 999999998754221111100 00 0111111122345678889898876 59999987 8888876
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-30 Score=234.52 Aligned_cols=167 Identities=14% Similarity=0.192 Sum_probs=128.0
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Ccccc
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYST 80 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~g 80 (357)
|+|.+++. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....|
T Consensus 106 ~~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 180 (355)
T cd07874 106 ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 180 (355)
T ss_pred ccHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCccc
Confidence 45555552 35899999999999999999999999 999999999999999999999999999865443 24578
Q ss_pred CCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC------------------cccccc-------
Q 018381 81 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------------------NFLMLM------- 135 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~------------------~~~~~~------- 135 (357)
|+.|+|||++.+..++.++|||||||++|+|++|+.||........... ......
T Consensus 181 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (355)
T cd07874 181 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA 260 (355)
T ss_pred cCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccc
Confidence 9999999999988899999999999999999999998865321000000 000000
Q ss_pred ----ccc-----c--CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 ----DSC-----L--EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 ----~~~-----~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
... . ....+...+..+.++|.+||..||.+|||+.++++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 261 GLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred cccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000 0 001112235678999999999999999999999997
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-30 Score=223.73 Aligned_cols=169 Identities=18% Similarity=0.225 Sum_probs=137.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++....+..+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR-VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYAC 158 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEECCCCcEEEcccCcceeecccccccc
Confidence 47899999986445567899999999999999999999999 999999999999999999999999998755432 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...+++.|+|||++.+..++.++|+||||+++|+|++|..||........... .........+...+..+.++|.
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~ 233 (255)
T cd08219 159 TYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILK-----VCQGSYKPLPSHYSYELRSLIK 233 (255)
T ss_pred cccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHH-----HhcCCCCCCCcccCHHHHHHHH
Confidence 35688899999999888899999999999999999999998865432211111 0011111234456678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|++|||+.+++..
T Consensus 234 ~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 234 QMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHhCCcccCCCHHHHhhc
Confidence 9999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=234.72 Aligned_cols=171 Identities=20% Similarity=0.187 Sum_probs=131.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 125 ~~gg~L~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~ 200 (371)
T cd05622 125 MPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 200 (371)
T ss_pred CCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccc
Confidence 57999999993 456899999999999999999999999 999999999999999999999999998755432
Q ss_pred CccccCCCCCCccccccC----CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTG----RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
....||+.|+|||++.+. .++.++|||||||++|||++|+.||........... +.... .....+.....+..+
T Consensus 201 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~-i~~~~-~~~~~~~~~~~s~~~ 278 (371)
T cd05622 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK-IMNHK-NSLTFPDDNDISKEA 278 (371)
T ss_pred cCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHH-HHcCC-CcccCCCcCCCCHHH
Confidence 245689999999998753 378899999999999999999999875432111110 00000 011111123467889
Q ss_pred HHHHHHhccCCCCC--CCCHHHHHHHhC
Q 018381 152 VRLASRCLQYEPRE--RPNAKSLVASLT 177 (357)
Q Consensus 152 ~~li~~cl~~~p~~--Rps~~~v~~~l~ 177 (357)
.++|..||..++.+ |+++.++++|..
T Consensus 279 ~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 279 KNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred HHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 99999999844443 789999998853
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=221.50 Aligned_cols=170 Identities=25% Similarity=0.387 Sum_probs=135.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++++|.+++.. ....+++..++.++.+++.||.|||+++ ++||||||+||+++.++.+||+|||+++......
T Consensus 74 ~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 151 (251)
T cd05041 74 VPGGSLLTFLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS 151 (251)
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EehhhcCcceEEEcCCCcEEEeeccccccccCCcceec
Confidence 468999999953 3457899999999999999999999999 9999999999999999999999999987554221
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...++..|+|||.+.++.++.++|+|||||++|+|++ |..||.......... ..........+...+..+.+
T Consensus 152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 226 (251)
T cd05041 152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRE-----RIESGYRMPAPQLCPEEIYR 226 (251)
T ss_pred cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHH-----HHhcCCCCCCCccCCHHHHH
Confidence 1223567999999988889999999999999999999 666665432211111 11111122234456788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhC
Q 018381 154 LASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
++.+||..+|++|||+.++++.|+
T Consensus 227 li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 227 LMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHhccChhhCcCHHHHHHHhh
Confidence 999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=223.47 Aligned_cols=169 Identities=18% Similarity=0.227 Sum_probs=132.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++. ....+++.++..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 88 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06646 88 CGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSKG-KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRK 164 (267)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEECcCccceeecccccccC
Confidence 47899999984 4567999999999999999999999999 999999999999999999999999998755322 2
Q ss_pred ccccCCCCCCccccc---cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccC---CCCChhhHHH
Q 018381 77 SYSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE---GHFSNDDGTE 150 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 150 (357)
...+++.|+|||.+. ...++.++|+|||||++|+|++|+.|+........ ........+. .......+..
T Consensus 165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 240 (267)
T cd06646 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA----LFLMSKSNFQPPKLKDKTKWSST 240 (267)
T ss_pred ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh----heeeecCCCCCCCCccccccCHH
Confidence 346788999999884 34567899999999999999999988753311100 0011011111 0112235678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
+.++|.+||..+|++|||+.+++.+|
T Consensus 241 ~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 241 FHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 99999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-29 Score=223.49 Aligned_cols=166 Identities=19% Similarity=0.321 Sum_probs=139.3
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC-CCCCeEEecCCcccccCCC---Cc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
++|+|+|||.+ ....+.+....+++.||+.|+.|||.-. ||||||||+||++- .-|.|||.|||++..+..+ .+
T Consensus 100 D~GDl~DyImK-He~Gl~E~La~kYF~QI~~AI~YCHqLH-VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~T 177 (864)
T KOG4717|consen 100 DGGDLFDYIMK-HEEGLNEDLAKKYFAQIVHAISYCHQLH-VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTT 177 (864)
T ss_pred CCchHHHHHHh-hhccccHHHHHHHHHHHHHHHHHHhhhh-hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhc
Confidence 47899999964 5677999999999999999999999999 99999999999875 5688999999999877665 46
Q ss_pred cccCCCCCCccccccCCCC-ccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
.+|++.|-|||.+.+..|+ ++.|||||||+||-|++|+.||...... ..+..+++..+ ..|..++.++++||.
T Consensus 178 sCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS----ETLTmImDCKY--tvPshvS~eCrdLI~ 251 (864)
T KOG4717|consen 178 SCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS----ETLTMIMDCKY--TVPSHVSKECRDLIQ 251 (864)
T ss_pred ccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch----hhhhhhhcccc--cCchhhhHHHHHHHH
Confidence 7899999999999998886 5889999999999999999887643211 11222223322 257788999999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
.||+.||++|.+.++|..+
T Consensus 252 sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 252 SMLVRDPKKRASLEEIVST 270 (864)
T ss_pred HHHhcCchhhccHHHHhcc
Confidence 9999999999999999875
|
|
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=222.81 Aligned_cols=172 Identities=24% Similarity=0.326 Sum_probs=137.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++....+..+++.++..++.|++.|+.|||+++ ++|+||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN-YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR 161 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcchheEEEcCCCCEEECccccceeccchhhhhh
Confidence 47899999996544567999999999999999999999999 9999999999999999999999999987654321
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|+|||.+.+..++.++|+||||+++|+|++ |+.||.......... ..........+...+..+.++
T Consensus 162 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 236 (261)
T cd05034 162 EGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLE-----QVERGYRMPRPPNCPEELYDL 236 (261)
T ss_pred hccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCCCHHHHHH
Confidence 2234568999999998889999999999999999998 887775432211111 011111222334457789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
+.+||..+|++||++.++.+.|+.
T Consensus 237 i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 237 MLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHcccCcccCCCHHHHHHHHhc
Confidence 999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=232.63 Aligned_cols=169 Identities=19% Similarity=0.277 Sum_probs=129.9
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-CccccC
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt 81 (357)
+++|.+++ ..+.+++.++..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....||
T Consensus 103 ~~~l~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t 178 (343)
T cd07878 103 GADLNNIV---KCQKLSDEHVQFLIYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVAT 178 (343)
T ss_pred CCCHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCChhhEEECCCCCEEEcCCccceecCCCcCCcccc
Confidence 67888877 4567999999999999999999999999 999999999999999999999999998865443 345789
Q ss_pred CCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh-hh------cCcc------------ccccccc--c
Q 018381 82 LAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IR------GKNF------------LMLMDSC--L 139 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~------~~~~------------~~~~~~~--~ 139 (357)
+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... +. +... ....... .
T Consensus 179 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (343)
T cd07878 179 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHM 258 (343)
T ss_pred ccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccc
Confidence 99999999876 567889999999999999999998886431100 00 0000 0000000 0
Q ss_pred CC----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 140 EG----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 140 ~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.. ......++.+.++|.+||..||++|||+.+++.|
T Consensus 259 ~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 259 PQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred cchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 0001234568899999999999999999999987
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-30 Score=236.50 Aligned_cols=170 Identities=18% Similarity=0.151 Sum_probs=130.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 159 (377)
T cd05629 83 LPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKLG-FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAY 159 (377)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 47999999995 4568999999999999999999999999 999999999999999999999999998632110
Q ss_pred ----------------------------------------------CccccCCCCCCccccccCCCCccccccchHHHHH
Q 018381 76 ----------------------------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL 109 (357)
Q Consensus 76 ----------------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 109 (357)
.+..||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (377)
T cd05629 160 YQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMF 239 (377)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhh
Confidence 0235899999999999888999999999999999
Q ss_pred HHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCC---CCHHHHHHHh
Q 018381 110 DLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER---PNAKSLVASL 176 (357)
Q Consensus 110 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R---ps~~~v~~~l 176 (357)
||++|..||........... +.. ....+..+.....+.++.++|.+||. +|.+| +++.+++.|-
T Consensus 240 elltG~~Pf~~~~~~~~~~~-i~~-~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp 306 (377)
T cd05629 240 ECLIGWPPFCSENSHETYRK-IIN-WRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHP 306 (377)
T ss_pred hhhcCCCCCCCCCHHHHHHH-HHc-cCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCC
Confidence 99999998865422111000 000 00011111112356789999999997 67665 5999999873
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=224.02 Aligned_cols=172 Identities=22% Similarity=0.267 Sum_probs=135.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. ..+.+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++.......
T Consensus 87 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g-~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 164 (269)
T cd05065 87 MENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 164 (269)
T ss_pred CCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccChheEEEcCCCcEEECCCccccccccCccccc
Confidence 468999999953 3567999999999999999999999999 99999999999999999999999999875433211
Q ss_pred ----ccc--CCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 78 ----YST--NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 78 ----~~g--t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
..+ +..|++||++.+..++.++|||||||++|||++ |..||.......... .+......+.+..++..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~ 239 (269)
T cd05065 165 YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIN-----AIEQDYRLPPPMDCPTA 239 (269)
T ss_pred cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHH-----HHHcCCcCCCcccCCHH
Confidence 111 347999999998889999999999999999886 888875432221111 11111222234456788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
+.+++.+||..+|++||++.+++..|+.+
T Consensus 240 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 240 LHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 99999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=221.18 Aligned_cols=175 Identities=14% Similarity=0.130 Sum_probs=127.5
Q ss_pred CCCCchhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC-----
Q 018381 1 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----- 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----- 73 (357)
+++|+|.+++... ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++....
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 155 (268)
T cd05086 77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN-FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI 155 (268)
T ss_pred CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-eeccCCccceEEEcCCccEEecccccccccCcchhh
Confidence 4789999999532 1245778888999999999999999999 9999999999999999999999999976422
Q ss_pred -CCCccccCCCCCCcccccc-------CCCCccccccchHHHHHHHHhCC-CCCCcchhHhhhcCccccccccccCCCCC
Q 018381 74 -DGKSYSTNLAFTPPEYLRT-------GRVIPESVVYSFGTLLLDLLSGK-HIPPSHALDLIRGKNFLMLMDSCLEGHFS 144 (357)
Q Consensus 74 -~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (357)
......++..|+|||++.. ..++.++|||||||++|||+++. .|+.........................+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (268)
T cd05086 156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLE 235 (268)
T ss_pred hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccC
Confidence 1234467889999998853 23467899999999999999764 45433211111000001101111122223
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 145 NDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 145 ~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
...++.+.+++..|| .+|++||++.+|++.|.
T Consensus 236 ~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 236 LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 345678899999999 67999999999998764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-30 Score=240.72 Aligned_cols=171 Identities=20% Similarity=0.251 Sum_probs=129.2
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC------C
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------K 76 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~ 76 (357)
+|+|.+++.. ..+.+++.+++.|+.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++..... .
T Consensus 243 ~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 243 RSDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence 4688888842 3457999999999999999999999999 999999999999999999999999998754322 1
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcch------------hHhhhcCccc--cccc------
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHA------------LDLIRGKNFL--MLMD------ 136 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~------------~~~~~~~~~~--~~~~------ 136 (357)
...||+.|+|||++.+..++.++|||||||++|||++|..+++... ...+...... ....
T Consensus 321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l 400 (461)
T PHA03211 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL 400 (461)
T ss_pred ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence 3468999999999999889999999999999999999876543221 0111110000 0000
Q ss_pred ---------cccCCCCC-------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 137 ---------SCLEGHFS-------NDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 137 ---------~~~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
........ ...+..+.+||.+||+.||.+|||+.++++|
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000000 0123578999999999999999999999997
|
|
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=235.33 Aligned_cols=170 Identities=18% Similarity=0.271 Sum_probs=132.1
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC------C
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------K 76 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~ 76 (357)
+++|.+++. ....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 169 ~~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~g-ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~ 245 (392)
T PHA03207 169 KCDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRG-IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCY 245 (392)
T ss_pred CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEccCccccccCccccccccc
Confidence 468888883 5678999999999999999999999999 999999999999999999999999998754432 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhH----hhhc-------Cc--cc-----------
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD----LIRG-------KN--FL----------- 132 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~----~~~~-------~~--~~----------- 132 (357)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... .+.. .. +.
T Consensus 246 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~ 325 (392)
T PHA03207 246 GWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHF 325 (392)
T ss_pred ccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHH
Confidence 346899999999999888999999999999999999999998653210 0000 00 00
Q ss_pred cccccccCCCCC-------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 133 MLMDSCLEGHFS-------NDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 133 ~~~~~~~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.......+..+. ...+.++.++|.+||..||++|||+.+++.+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 326 KQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000011110 1235678899999999999999999999998
|
|
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=224.41 Aligned_cols=176 Identities=20% Similarity=0.256 Sum_probs=132.5
Q ss_pred CCCCchhhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccc
Q 018381 1 MPNETLSKHLFHWE---------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 71 (357)
Q Consensus 1 ~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~ 71 (357)
+++|+|.+++.... ...+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 179 (296)
T cd05095 101 MENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGKNYTIKIADFGMSRN 179 (296)
T ss_pred CCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-eecccCChheEEEcCCCCEEeccCccccc
Confidence 46899999985321 135788999999999999999999999 99999999999999999999999999875
Q ss_pred cCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh--CCCCCCcchhHhhhcC--ccccccccccCC
Q 018381 72 SRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS--GKHIPPSHALDLIRGK--NFLMLMDSCLEG 141 (357)
Q Consensus 72 ~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~--g~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 141 (357)
..... ...+++.|++||+..++.++.++|+|||||++|||++ |..|+........... ............
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (296)
T cd05095 180 LYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYL 259 (296)
T ss_pred ccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccC
Confidence 43321 2234578999999888889999999999999999998 5556543221111100 000000000111
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 142 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 142 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+.+..+++.+.+++.+||+.||++||++.+|.+.|+
T Consensus 260 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 260 PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 223456688999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=223.77 Aligned_cols=171 Identities=16% Similarity=0.174 Sum_probs=132.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++.. ..+++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 84 ~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (282)
T cd06643 84 CAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD 161 (282)
T ss_pred cCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEccCCCEEEccccccccccccccccc
Confidence 468899888743 4568999999999999999999999999 999999999999999999999999998654322 3
Q ss_pred ccccCCCCCCccccc-----cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 77 SYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
...+++.|+|||++. +..++.++|+|||||++|+|++|+.||........... ....... ....+...+..+
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~ 238 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLK-IAKSEPP--TLAQPSRWSSEF 238 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHH-HhhcCCC--CCCCccccCHHH
Confidence 446889999999984 34567899999999999999999988754321111000 0000001 111233456789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 152 VRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
.++|.+||..+|.+||++.+++.+-
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 239 KDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred HHHHHHHccCChhhCcCHHHHhcCC
Confidence 9999999999999999999998873
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=232.88 Aligned_cols=168 Identities=14% Similarity=0.166 Sum_probs=127.2
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Ccccc
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYST 80 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~g 80 (357)
|+|.+++. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....|
T Consensus 110 ~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~-ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 184 (359)
T cd07876 110 ANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV 184 (359)
T ss_pred cCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcc
Confidence 44555552 35889999999999999999999999 999999999999999999999999998754332 23467
Q ss_pred CCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHh-hh----c--C-----------cccccc--cccc-
Q 018381 81 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IR----G--K-----------NFLMLM--DSCL- 139 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~----~--~-----------~~~~~~--~~~~- 139 (357)
|+.|+|||++.+..++.++|||||||++|+|++|+.||....... +. . . ...... .+..
T Consensus 185 t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (359)
T cd07876 185 TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYP 264 (359)
T ss_pred cCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCC
Confidence 899999999998899999999999999999999999886431100 00 0 0 000000 0000
Q ss_pred ----C-----------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 140 ----E-----------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 140 ----~-----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
. .......++.+.++|.+||..||++|||+.+++.|-
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 265 GISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred CcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 0 001112356789999999999999999999999973
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=225.87 Aligned_cols=169 Identities=20% Similarity=0.217 Sum_probs=134.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--Ccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~ 78 (357)
++||+|.+++. ..+.+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ...
T Consensus 79 ~~~~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (279)
T cd05633 79 MNGGDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 155 (279)
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCc
Confidence 57899999985 4567999999999999999999999999 999999999999999999999999998754332 234
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
.||+.|+|||.+.+ ..++.++|+|||||++|+|++|..||.......... .... ........+...+..+.++|.+
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~li~~ 232 (279)
T cd05633 156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRM-TLTVNVELPDSFSPELKSLLEG 232 (279)
T ss_pred CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH--HHHH-hhcCCcCCccccCHHHHHHHHH
Confidence 68999999999864 457889999999999999999999886431111000 0000 0111223345567889999999
Q ss_pred hccCCCCCCC-----CHHHHHHH
Q 018381 158 CLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rp-----s~~~v~~~ 175 (357)
||..||.+|| ++.++++|
T Consensus 233 ~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 233 LLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HhcCCHHHhcCCCCCCHHHHHhC
Confidence 9999999999 69999987
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=234.02 Aligned_cols=167 Identities=14% Similarity=0.180 Sum_probs=127.8
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Ccccc
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYST 80 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~g 80 (357)
++|.+++. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+
T Consensus 113 ~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~ 187 (364)
T cd07875 113 ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 187 (364)
T ss_pred CCHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcc
Confidence 45666662 35889999999999999999999999 999999999999999999999999999865443 34578
Q ss_pred CCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcc------------------c----------
Q 018381 81 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF------------------L---------- 132 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~------------------~---------- 132 (357)
|+.|+|||++.+..++.++|||||||++|+|++|+.||............. .
T Consensus 188 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (364)
T cd07875 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYA 267 (364)
T ss_pred cCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcC
Confidence 999999999999889999999999999999999999886531110000000 0
Q ss_pred -----ccccc---ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 133 -----MLMDS---CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 133 -----~~~~~---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..... .............+.++|.+||..||.+|||+.++++|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred CCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000 00000111234578999999999999999999999997
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=223.12 Aligned_cols=175 Identities=22% Similarity=0.305 Sum_probs=138.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++......
T Consensus 88 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 165 (270)
T cd05056 88 APLGELRSYLQV-NKYSLDLASLILYSYQLSTALAYLESKR-FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKA 165 (270)
T ss_pred CCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccChheEEEecCCCeEEccCceeeecccccceec
Confidence 478999999953 3456999999999999999999999999 9999999999999999999999999987554332
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|+|||.+.+..++.++||||||+++|+|++ |..||.......... .+ ........+..++..+.++
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~l 240 (270)
T cd05056 166 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIG-RI----ENGERLPMPPNCPPTLYSL 240 (270)
T ss_pred CCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH-HH----HcCCcCCCCCCCCHHHHHH
Confidence 1223467999999988888999999999999999986 988876542211110 00 0111112345567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
|.+||..+|++|||+.+++..|..+...
T Consensus 241 i~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 241 MTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999998876543
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.6e-30 Score=221.91 Aligned_cols=165 Identities=19% Similarity=0.274 Sum_probs=141.0
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Ccc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSY 78 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~ 78 (357)
.+|.|+|||. ..+.|++.+..+|++||++|+.|||..+ ++|||||.+|||+|.|+.+||+|||++..+... .++
T Consensus 136 S~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknr-VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTF 212 (668)
T KOG0611|consen 136 SGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNR-VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTF 212 (668)
T ss_pred CCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhcc-ceecccchhheeecCCCCeeeeccchhhhhccccHHHHh
Confidence 4799999996 5789999999999999999999999999 999999999999999999999999999887765 478
Q ss_pred ccCCCCCCccccccCCC-CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCC-ChhhHHHHHHHHH
Q 018381 79 STNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF-SNDDGTELVRLAS 156 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~ 156 (357)
+|++-|.+||.+.+.+| ++..|-|||||+||.|+.|..||.+.....+- ...-++.+ .+..|.+..-||+
T Consensus 213 CGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lv--------rQIs~GaYrEP~~PSdA~gLIR 284 (668)
T KOG0611|consen 213 CGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLV--------RQISRGAYREPETPSDASGLIR 284 (668)
T ss_pred cCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHH--------HHhhcccccCCCCCchHHHHHH
Confidence 99999999999999887 67999999999999999999999876433321 11112222 2234567889999
Q ss_pred HhccCCCCCCCCHHHHHHHhC
Q 018381 157 RCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+||-.+|++|.|+.+|..|-+
T Consensus 285 wmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 285 WMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred HHHhcCcccchhHHHHhhhhe
Confidence 999999999999999988753
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-30 Score=234.10 Aligned_cols=176 Identities=18% Similarity=0.256 Sum_probs=153.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC--cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--SY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~ 78 (357)
|.+|+|.|||++.++.-++.-..+.++.||.+|++||..++ +|||||...|+|++++..||++|||+++...... .+
T Consensus 345 M~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn-FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAH 423 (1157)
T KOG4278|consen 345 MCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAH 423 (1157)
T ss_pred ccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhccccccceEEeeccchhhhhcCCceecc
Confidence 78999999998877788999999999999999999999999 9999999999999999999999999999766443 23
Q ss_pred cc---CCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 79 ST---NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 79 ~g---t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
.| .+-|.|||-+....++.++|||+|||+|||+.| |..|+++. .-.++..+++..++..-|..|++.+.+|
T Consensus 424 AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----dlSqVY~LLEkgyRM~~PeGCPpkVYeL 498 (1157)
T KOG4278|consen 424 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVYGLLEKGYRMDGPEGCPPKVYEL 498 (1157)
T ss_pred cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----cHHHHHHHHhccccccCCCCCCHHHHHH
Confidence 33 578999999999999999999999999999987 66677664 2234456677778888899999999999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
++.||..+|.+||++.++.+.|+.+...
T Consensus 499 MraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 499 MRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred HHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 9999999999999999999988776544
|
|
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-29 Score=220.14 Aligned_cols=170 Identities=19% Similarity=0.249 Sum_probs=137.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.......+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE 159 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence 57899999996444567999999999999999999999999 9999999999999999999999999987554332
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...+++.|+|||++.+..++.++|+||||+++|+|++|..||.......... ........ ..+...+..+.+++.
T Consensus 160 ~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~i~ 234 (256)
T cd08221 160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVV----KIVQGNYT-PVVSVYSSELISLVH 234 (256)
T ss_pred ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHH----HHHcCCCC-CCccccCHHHHHHHH
Confidence 4568899999999988888999999999999999999998876532211111 11111111 123445678999999
Q ss_pred HhccCCCCCCCCHHHHHHHh
Q 018381 157 RCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~l 176 (357)
+||..+|++||++.++++++
T Consensus 235 ~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 235 SLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HHcccCcccCCCHHHHhhCc
Confidence 99999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=225.92 Aligned_cols=177 Identities=23% Similarity=0.344 Sum_probs=137.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++.+++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++.......
T Consensus 90 ~~~~~l~~~l~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 167 (284)
T cd05038 90 LPSGSLRDYLQR-HRDQINLKRLLLFSSQICKGMDYLGSQR-YIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYY 167 (284)
T ss_pred CCCCCHHHHHHh-CccccCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccccccccccCCccee
Confidence 468999999953 3446999999999999999999999999 9999999999999999999999999988665321
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhh----------cCccccccccccCCCC
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR----------GKNFLMLMDSCLEGHF 143 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 143 (357)
...++..|++||.+.+..++.++|+||||+++|||++|..|+......... ...+............
T Consensus 168 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (284)
T cd05038 168 VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPR 247 (284)
T ss_pred ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCC
Confidence 123456799999998888999999999999999999999886543211110 0000111111122223
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
+..++..+.+++.+||..+|++|||+.+|++.|+.+
T Consensus 248 ~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 248 PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 345668899999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=231.13 Aligned_cols=160 Identities=21% Similarity=0.321 Sum_probs=125.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC------ccccCCCCCCcccc
Q 018381 17 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYL 90 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~ 90 (357)
.+++.++..++.||++||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...++..|+|||++
T Consensus 175 ~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 253 (343)
T cd05103 175 VLTLEDLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 253 (343)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHh
Confidence 4789999999999999999999999 9999999999999999999999999987543221 22346779999999
Q ss_pred ccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCH
Q 018381 91 RTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 169 (357)
Q Consensus 91 ~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~ 169 (357)
.+..++.++|+||||+++|+|++ |..|+........ .............+...++.+.+++.+||..+|++|||+
T Consensus 254 ~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~ 329 (343)
T cd05103 254 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 329 (343)
T ss_pred cCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH----HHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence 88889999999999999999997 7777654311100 001111111112233345689999999999999999999
Q ss_pred HHHHHHhCcccc
Q 018381 170 KSLVASLTPLQK 181 (357)
Q Consensus 170 ~~v~~~l~~~~~ 181 (357)
.+|+++|+.+..
T Consensus 330 ~eil~~l~~~~~ 341 (343)
T cd05103 330 SELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHHHHh
Confidence 999999987654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=228.05 Aligned_cols=172 Identities=13% Similarity=0.208 Sum_probs=124.1
Q ss_pred CCchhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee----CCCCCeEEecCCcccc
Q 018381 3 NETLSKHLFHW-------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKN 71 (357)
Q Consensus 3 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~~~~ 71 (357)
+++|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 45666666311 1236899999999999999999999999 9999999999999 4567899999999975
Q ss_pred cCCC-------CccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC--------------
Q 018381 72 SRDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-------------- 129 (357)
Q Consensus 72 ~~~~-------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-------------- 129 (357)
.... ....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.....+.....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 5422 23567999999999876 4578899999999999999999988753211000000
Q ss_pred ---------cccccc----------ccccC--------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 130 ---------NFLMLM----------DSCLE--------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 130 ---------~~~~~~----------~~~~~--------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...... ..... .......+..+.++|.+||+.||.+|||+.++++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000 00000 00001123467899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=223.76 Aligned_cols=174 Identities=15% Similarity=0.199 Sum_probs=139.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 167 (279)
T cd05057 90 MPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYH 167 (279)
T ss_pred CCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecccCcceEEEcCCCeEEECCCcccccccCccccee
Confidence 478999999953 4557999999999999999999999999 99999999999999999999999999876543321
Q ss_pred ---cccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 78 ---YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 78 ---~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
..++..|++||.+....++.++|+||||+++||+++ |+.||.......+... +........+..++..+.+
T Consensus 168 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 242 (279)
T cd05057 168 AEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDL-----LEKGERLPQPPICTIDVYM 242 (279)
T ss_pred cCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH-----HhCCCCCCCCCCCCHHHHH
Confidence 123567999999988888999999999999999998 9888765432222111 1111112233445678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
++.+||..+|++||++.++++.|..+..
T Consensus 243 ~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 243 VLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred HHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.3e-30 Score=229.70 Aligned_cols=165 Identities=21% Similarity=0.297 Sum_probs=126.7
Q ss_pred chhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC------cc
Q 018381 5 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------SY 78 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~ 78 (357)
+|..+|..+......| .+..+..|++.++.++|..| |||.||||.|+|+- .|.+||+|||.|......+ +.
T Consensus 445 DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g-IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQ 521 (677)
T KOG0596|consen 445 DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG-IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQ 521 (677)
T ss_pred cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc-eeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccc
Confidence 6888885433333445 78889999999999999999 99999999999998 7899999999998776543 45
Q ss_pred ccCCCCCCccccccC-----------CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhh
Q 018381 79 STNLAFTPPEYLRTG-----------RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 147 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (357)
+||+.||+||.+... +.+.++|||||||+||+|+.|+.||... ...+. .+..+.++...-+|+...
T Consensus 522 vGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-~n~~a--Kl~aI~~P~~~Iefp~~~ 598 (677)
T KOG0596|consen 522 VGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-INQIA--KLHAITDPNHEIEFPDIP 598 (677)
T ss_pred cCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-HHHHH--HHHhhcCCCccccccCCC
Confidence 799999999988642 2567899999999999999999876532 21121 223333333322333322
Q ss_pred -HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 148 -GTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 148 -~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..++.+++..||..||++||++.++++|
T Consensus 599 ~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 599 ENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred CchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 2349999999999999999999999987
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=223.05 Aligned_cols=167 Identities=18% Similarity=0.349 Sum_probs=135.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++++|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~-ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06628 88 VPGGSVAALLN--NYGAFEETLVRNFVRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTK 164 (267)
T ss_pred cCCCCHHHHHH--hccCccHHHHHHHHHHHHHHHHHHHhcC-cccccCCHHHEEEcCCCCEEecccCCCcccccccccCC
Confidence 46899999994 3467999999999999999999999999 999999999999999999999999998755421
Q ss_pred -----CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 76 -----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 76 -----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
....|+..|+|||.+.+..++.++|+|||||++|+|++|+.||....... .+..... ......+...+..
T Consensus 165 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~ 239 (267)
T cd06628 165 TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ----AIFKIGE-NASPEIPSNISSE 239 (267)
T ss_pred ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH----HHHHHhc-cCCCcCCcccCHH
Confidence 12357889999999988888999999999999999999999886532111 0011101 1122334456788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.++|.+||+.+|++||++.+++++
T Consensus 240 ~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 240 AIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred HHHHHHHHccCCchhCcCHHHHhhC
Confidence 9999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=222.14 Aligned_cols=166 Identities=18% Similarity=0.323 Sum_probs=134.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++ ..+.+++..+..++.|++.|+.|||+++ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~-ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06642 84 LGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSER-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred cCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhcCC-eeccCCChheEEEeCCCCEEEccccccccccCcchhhh
Confidence 4789999998 4567999999999999999999999999 9999999999999999999999999987554322
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...++..|+|||++.+..++.++|+|||||++|||++|+.|+........ ............+...+..+.++|.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~ 234 (277)
T cd06642 160 TFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-----LFLIPKNSPPTLEGQYSKPFKEFVE 234 (277)
T ss_pred cccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-----HhhhhcCCCCCCCcccCHHHHHHHH
Confidence 34578899999999988889999999999999999999988653211110 0111111111233345678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|++||++.+++.+
T Consensus 235 ~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 235 ACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHccCCcccCcCHHHHHHh
Confidence 9999999999999999986
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=233.77 Aligned_cols=166 Identities=22% Similarity=0.297 Sum_probs=133.4
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee-CCCCCeEEecCCcccccCCC-Cccc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF-DQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill-~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
.||-|.+.+. ....+. .++..|+.+|+.|+.|||++| ||||||||+|||+ +..|+++|+|||.++..... .+.+
T Consensus 399 ~g~ell~ri~--~~~~~~-~e~~~w~~~lv~Av~~LH~~g-vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~ 474 (612)
T KOG0603|consen 399 DGGELLRRIR--SKPEFC-SEASQWAAELVSAVDYLHEQG-VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPA 474 (612)
T ss_pred cccHHHHHHH--hcchhH-HHHHHHHHHHHHHHHHHHhcC-eeecCCChhheeecCCCCcEEEEEechhhhCchhhcccc
Confidence 4555555553 222333 777889999999999999999 9999999999999 68999999999999877655 2335
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
-|..|.|||++....+++++|+||||++||+|++|+.|+.....+ .+.......+.+...++...++|+++||
T Consensus 475 ~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s~~vS~~AKdLl~~LL 547 (612)
T KOG0603|consen 475 LTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFSECVSDEAKDLLQQLL 547 (612)
T ss_pred hhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccccccCHHHHHHHHHhc
Confidence 688999999999999999999999999999999999988654322 1122222233445678899999999999
Q ss_pred cCCCCCCCCHHHHHHHhCc
Q 018381 160 QYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 160 ~~~p~~Rps~~~v~~~l~~ 178 (357)
+.||.+||++.++..|-..
T Consensus 548 ~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 548 QVDPALRLGADEIGAHPWF 566 (612)
T ss_pred cCChhhCcChhhhccCcch
Confidence 9999999999999988443
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=230.35 Aligned_cols=171 Identities=13% Similarity=0.206 Sum_probs=128.6
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 79 (357)
.|+|.+++.. ....+++.+++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 140 ~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 217 (357)
T PHA03209 140 SSDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQR-IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA 217 (357)
T ss_pred CCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEecCccccccccCccccccc
Confidence 4788888843 4568999999999999999999999999 999999999999999999999999998754322 2456
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchh----Hhhh--cCcccc------ccccccC-------
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL----DLIR--GKNFLM------LMDSCLE------- 140 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~----~~~~--~~~~~~------~~~~~~~------- 140 (357)
||+.|+|||++.+..++.++|||||||++|||+++..+++.... .... ...+.. ..+..+.
T Consensus 218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 297 (357)
T PHA03209 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRL 297 (357)
T ss_pred ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHH
Confidence 89999999999988899999999999999999987655432100 0000 000000 0000000
Q ss_pred ------------CCC-------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 141 ------------GHF-------SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 141 ------------~~~-------~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..+ ....+.++.++|.+||+.||.+|||+.+++.|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 298 VRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 000 01234567789999999999999999999987
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=234.98 Aligned_cols=173 Identities=19% Similarity=0.260 Sum_probs=136.7
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------ 76 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------ 76 (357)
+++|.+++.......+++.+++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 219 ~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~ 297 (400)
T cd05105 219 DSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN-CVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKG 297 (400)
T ss_pred hhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccC
Confidence 456677775445678999999999999999999999999 9999999999999999999999999987543321
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
...++..|+|||++.+..++.++|||||||++|||++ |..||.....+... ...+........+..++..+.+++
T Consensus 298 ~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li 373 (400)
T cd05105 298 STFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTF----YNKIKSGYRMAKPDHATQEVYDIM 373 (400)
T ss_pred CcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHH----HHHHhcCCCCCCCccCCHHHHHHH
Confidence 2345678999999988889999999999999999997 88777653211110 011111112223445678899999
Q ss_pred HHhccCCCCCCCCHHHHHHHhCccc
Q 018381 156 SRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
.+||..+|++||++.+|.+.|+.+.
T Consensus 374 ~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 374 VKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHHCccCHhHCcCHHHHHHHHHHHc
Confidence 9999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-29 Score=221.45 Aligned_cols=170 Identities=18% Similarity=0.174 Sum_probs=131.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++. ..+.+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 88 ~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06645 88 CGGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKG-KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRK 164 (267)
T ss_pred cCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccc
Confidence 46899999984 4568999999999999999999999999 999999999999999999999999998644322 3
Q ss_pred ccccCCCCCCccccc---cCCCCccccccchHHHHHHHHhCCCCCCcchhHh-hhcCccccccccccCCCCChhhHHHHH
Q 018381 77 SYSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...|+..|+|||++. .+.++.++|+|||||++|+|++|..|+....... ...........+... .....+..+.
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 242 (267)
T cd06645 165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK--DKMKWSNSFH 242 (267)
T ss_pred cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccc--ccCCCCHHHH
Confidence 456899999999974 4567889999999999999999998875431110 000000000011110 1113456799
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 018381 153 RLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
++|.+||..+|++|||+.+++.+
T Consensus 243 ~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 243 HFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred HHHHHHccCCchhCcCHHHHhcC
Confidence 99999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=225.36 Aligned_cols=168 Identities=17% Similarity=0.227 Sum_probs=134.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++ ....+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 98 ~~~~~L~~~~---~~~~l~~~~~~~i~~~l~~al~~LH~~~-i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (296)
T cd06655 98 LAGGSLTDVV---TETCMDEAQIAAVCRECLQALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRS 173 (296)
T ss_pred cCCCcHHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccchhcccccccCC
Confidence 4789999998 3457999999999999999999999999 999999999999999999999999998754432 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...++..|+|||.+.+..++.++|+|||||++|+|++|+.||.......... .... ........+..+++.+.++|.
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~li~ 250 (296)
T cd06655 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-LIAT--NGTPELQNPEKLSPIFRDFLN 250 (296)
T ss_pred CcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHh--cCCcccCCcccCCHHHHHHHH
Confidence 3467889999999998888999999999999999999998876532111000 0000 000111123446678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|.+||++.+++.+
T Consensus 251 ~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 251 RCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred HHhhcChhhCCCHHHHhhC
Confidence 9999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-29 Score=218.95 Aligned_cols=170 Identities=16% Similarity=0.198 Sum_probs=135.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++++|.+++. ..+..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~L~~~l~-~~~~~l~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (256)
T cd06612 80 CGAGSVSDIMK-ITNKTLTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRN 157 (256)
T ss_pred CCCCcHHHHHH-hCccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEECCCCcEEEcccccchhcccCccccc
Confidence 46889999984 24578999999999999999999999999 9999999999999999999999999987654332
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...++..|+|||++.+..++.++||||||+++|+|++|+.|+......... ..... ........+...+..+.++|.
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~i~ 234 (256)
T cd06612 158 TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI-FMIPN--KPPPTLSDPEKWSPEFNDFVK 234 (256)
T ss_pred cccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh-hhhcc--CCCCCCCchhhcCHHHHHHHH
Confidence 345788999999999888899999999999999999999887643111100 00000 001111123345678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||+.+|++|||+.+++.+
T Consensus 235 ~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 235 KCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred HHHhcChhhCcCHHHHhcC
Confidence 9999999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-29 Score=218.90 Aligned_cols=170 Identities=19% Similarity=0.207 Sum_probs=140.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC-------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR------- 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~------- 73 (357)
|+||+|...+.++.++.|++..+..++.+|+-||+|||..| ||.|||||+||||.++|++.|+||.|+....
T Consensus 159 CpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG-ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~ 237 (459)
T KOG0610|consen 159 CPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG-IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVK 237 (459)
T ss_pred CCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc-eeeccCCcceeEEecCCcEEeeeccccccCCCCCeeec
Confidence 68999999998888899999999999999999999999999 9999999999999999999999998853110
Q ss_pred -----------------------------C------------------------CCccccCCCCCCccccccCCCCcccc
Q 018381 74 -----------------------------D------------------------GKSYSTNLAFTPPEYLRTGRVIPESV 100 (357)
Q Consensus 74 -----------------------------~------------------------~~~~~gt~~y~aPE~~~~~~~~~~~D 100 (357)
. ..+++||-.|+|||++.|..-+.+.|
T Consensus 238 s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVD 317 (459)
T KOG0610|consen 238 SSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVD 317 (459)
T ss_pred cCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhh
Confidence 0 01246788999999999999999999
Q ss_pred ccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC----HHHHHHH
Q 018381 101 VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN----AKSLVAS 175 (357)
Q Consensus 101 v~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps----~~~v~~~ 175 (357)
=|+|||++|||+.|..||.+...+. .+..++-....-+..+.++..+++||++.|++||.+|.. +.+|.+|
T Consensus 318 WWtfGIflYEmLyG~TPFKG~~~~~----Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 318 WWTFGIFLYEMLYGTTPFKGSNNKE----TLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRH 392 (459)
T ss_pred HHHHHHHHHHHHhCCCCcCCCCchh----hHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcC
Confidence 9999999999999999998764332 222333332222223367789999999999999999987 8888776
|
|
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=223.31 Aligned_cols=176 Identities=18% Similarity=0.226 Sum_probs=132.0
Q ss_pred CCCCchhhhhccCC----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCccc
Q 018381 1 MPNETLSKHLFHWE----------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 70 (357)
Q Consensus 1 ~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 70 (357)
++||+|.+++.... ...+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++
T Consensus 99 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nill~~~~~~kl~dfg~~~ 177 (295)
T cd05097 99 MENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNHYTIKIADFGMSR 177 (295)
T ss_pred CCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC-eeccccChhhEEEcCCCcEEeccccccc
Confidence 57899999984321 124789999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHhC--CCCCCcchhHhhhcC--ccccccccccC
Q 018381 71 NSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG--KHIPPSHALDLIRGK--NFLMLMDSCLE 140 (357)
Q Consensus 71 ~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g--~~~~~~~~~~~~~~~--~~~~~~~~~~~ 140 (357)
...... ...++..|+|||++.++.++.++|+|||||++|+|+++ ..||........... ...........
T Consensus 178 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (295)
T cd05097 178 NLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIY 257 (295)
T ss_pred ccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhcccccc
Confidence 543321 22346789999999888899999999999999999984 445443221111100 00000001111
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 141 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 141 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
...+...++.+.+|+.+||..+|++|||+.+|++.|.
T Consensus 258 ~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 258 LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1123345678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-29 Score=225.00 Aligned_cols=174 Identities=18% Similarity=0.249 Sum_probs=134.9
Q ss_pred CCCCchhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCccccc
Q 018381 1 MPNETLSKHLFHWE--------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 72 (357)
+++|+|.+++.... ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dikp~nili~~~~~~~L~Dfg~~~~~ 169 (288)
T cd05061 91 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDI 169 (288)
T ss_pred CCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCCChheEEEcCCCcEEECcCCccccc
Confidence 47899999995321 234577889999999999999999999 999999999999999999999999998754
Q ss_pred CCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCCh
Q 018381 73 RDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 145 (357)
Q Consensus 73 ~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
... ....++..|+|||.+.++.++.++|+|||||++|||++ |..|+.......... .+........+.
T Consensus 170 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~-----~~~~~~~~~~~~ 244 (288)
T cd05061 170 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK-----FVMDGGYLDQPD 244 (288)
T ss_pred cccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCCCCCCC
Confidence 322 12244678999999998889999999999999999998 566665432221111 110011112234
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
.+++.+.+++.+||+.+|++|||+.++++.|....
T Consensus 245 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 245 NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 55678999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=223.04 Aligned_cols=166 Identities=17% Similarity=0.287 Sum_probs=134.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++. ..++++.+++.++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||+++..... .
T Consensus 81 ~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (274)
T cd06609 81 CGGGSCLDLLK---PGKLDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRN 156 (274)
T ss_pred eCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEcccccceeecccccccc
Confidence 46899999994 348999999999999999999999999 999999999999999999999999998765433 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChh-hHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND-DGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li 155 (357)
...+++.|++||++.+..++.++|||||||++|+|++|+.||........ ............+.. .+..+.+++
T Consensus 157 ~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l 231 (274)
T cd06609 157 TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV-----LFLIPKNNPPSLEGNKFSKPFKDFV 231 (274)
T ss_pred cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH-----HHHhhhcCCCCCcccccCHHHHHHH
Confidence 45678899999999988899999999999999999999988754321111 011111111112222 567899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 018381 156 SRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+||..+|++|||+++++.+
T Consensus 232 ~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 232 SLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred HHHhhCChhhCcCHHHHhhC
Confidence 99999999999999999886
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-29 Score=221.78 Aligned_cols=167 Identities=17% Similarity=0.298 Sum_probs=136.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
++||+|.+++ ..+++++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~L~~~i---~~~~l~~~~~~~~~~~l~~~l~~lh~~~-ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06640 84 LGGGSALDLL---RAGPFDEFQIATMLKEILKGLDYLHSEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred CCCCcHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCcCCChhhEEEcCCCCEEEcccccceeccCCccccc
Confidence 4789999999 3467999999999999999999999999 999999999999999999999999998754432 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...++..|+|||++.+..++.++|+|||||++|+|++|..|+........ ............+..++..+.+++.
T Consensus 160 ~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~ 234 (277)
T cd06640 160 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-----LFLIPKNNPPTLTGEFSKPFKEFID 234 (277)
T ss_pred cccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-----hhhhhcCCCCCCchhhhHHHHHHHH
Confidence 34578899999999888889999999999999999999988754321111 1111111122344567788999999
Q ss_pred HhccCCCCCCCCHHHHHHHh
Q 018381 157 RCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~l 176 (357)
+||..+|++||++.+++.+-
T Consensus 235 ~~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06640 235 ACLNKDPSFRPTAKELLKHK 254 (277)
T ss_pred HHcccCcccCcCHHHHHhCh
Confidence 99999999999999999873
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=229.33 Aligned_cols=172 Identities=17% Similarity=0.148 Sum_probs=131.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++.+ .+..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~-iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~ 160 (332)
T cd05623 83 YVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 160 (332)
T ss_pred cCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEeecchheecccCCccee
Confidence 478999999953 3567999999999999999999999999 999999999999999999999999998754322
Q ss_pred CccccCCCCCCccccc-----cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 76 KSYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
....||+.|+|||++. .+.++.++|||||||++|||++|+.||....................+ ......+++.
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~-p~~~~~~s~~ 239 (332)
T cd05623 161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF-PAQVTDVSED 239 (332)
T ss_pred cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccC-CCccccCCHH
Confidence 2346899999999986 345788999999999999999999998754221111110000000001 1112346788
Q ss_pred HHHHHHHhccCCCCC--CCCHHHHHHH
Q 018381 151 LVRLASRCLQYEPRE--RPNAKSLVAS 175 (357)
Q Consensus 151 ~~~li~~cl~~~p~~--Rps~~~v~~~ 175 (357)
+.+++.+|+..++++ |+++.++++|
T Consensus 240 ~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 240 AKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 999999999765554 5899999988
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-29 Score=228.22 Aligned_cols=174 Identities=20% Similarity=0.220 Sum_probs=130.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
+++|+|.+++.......+++.+++.++.|++.||.|||+++ |+||||||+|||++.++.++++|||.+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 57899999996444567999999999999999999999999 99999999999999999999999986442211
Q ss_pred -----CCccccCCCCCCcccccc--CCCCccccccchHHHHHHHHhCCCCCCcchhHhhh----cCccccccc-------
Q 018381 75 -----GKSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR----GKNFLMLMD------- 136 (357)
Q Consensus 75 -----~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~----~~~~~~~~~------- 136 (357)
.....++..|+|||++.+ ..++.++|||||||++|||++|+.||......... ........+
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAE 239 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhh
Confidence 112345778999999976 45789999999999999999999988643111100 000000000
Q ss_pred ------------c-----------------ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 137 ------------S-----------------CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 137 ------------~-----------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
. ....+.....++.+.+++.+||+.||++|||+.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 240 ELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred hcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 0 00001112345689999999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-29 Score=221.52 Aligned_cols=172 Identities=22% Similarity=0.274 Sum_probs=136.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 77 (357)
++||+|.+++.. ....+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++.......
T Consensus 87 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd05066 87 MENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY 164 (267)
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeehhhchhcEEECCCCeEEeCCCCcccccccccceee
Confidence 478999999953 4467899999999999999999999999 99999999999999999999999999886543221
Q ss_pred ----cccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 78 ----YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 78 ----~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
..++..|++||++.++.++.++|+||||+++|++++ |..||.......... ........+.+..+++.+.
T Consensus 165 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd05066 165 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIK-----AIEEGYRLPAPMDCPAALH 239 (267)
T ss_pred ecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHH-----HHhCCCcCCCCCCCCHHHH
Confidence 122457999999998889999999999999999886 988875432211111 0011111223345678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
+++.+||+.+|.+||++.++++.|..+
T Consensus 240 ~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 240 QLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=221.85 Aligned_cols=167 Identities=18% Similarity=0.248 Sum_probs=132.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~-i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (266)
T cd06651 88 MPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGT 164 (266)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCCCccccccccccCC
Confidence 46889999995 3457999999999999999999999999 999999999999999999999999998744321
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
....++..|+|||++.+..++.++|+|||||++|+|++|+.||....... .............++...++.+.+
T Consensus 165 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 240 (266)
T cd06651 165 GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA----AIFKIATQPTNPQLPSHISEHARD 240 (266)
T ss_pred ccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH----HHHHHhcCCCCCCCchhcCHHHHH
Confidence 12457889999999998888999999999999999999998875431111 011111111122344556677888
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
++ +||..+|++||++.+++.|
T Consensus 241 li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 241 FL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred HH-HHhcCChhhCcCHHHHhcC
Confidence 88 6777899999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=223.71 Aligned_cols=172 Identities=23% Similarity=0.306 Sum_probs=133.6
Q ss_pred CCCCchhhhhccC--------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC
Q 018381 1 MPNETLSKHLFHW--------------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60 (357)
Q Consensus 1 ~~~gsL~~~l~~~--------------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~ 60 (357)
+++|+|.+++... ....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-i~H~dl~p~nil~~~~~~ 168 (288)
T cd05050 90 MAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-FVHRDLATRNCLVGENMV 168 (288)
T ss_pred CCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-eecccccHhheEecCCCc
Confidence 4688999998531 1235889999999999999999999999 999999999999999999
Q ss_pred eEEecCCcccccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccc
Q 018381 61 PRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 133 (357)
Q Consensus 61 ~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~ 133 (357)
++|+|||+++..... .....+..|+|||.+.+..++.++|||||||++|+|++ |..||.......... .
T Consensus 169 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~----~ 244 (288)
T cd05050 169 VKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIY----Y 244 (288)
T ss_pred eEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH----H
Confidence 999999998754322 12234667999999988889999999999999999997 766765432221110 0
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCc
Q 018381 134 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
..... ....+..++..+.++|.+||+.+|.+|||+.++++.|++
T Consensus 245 ~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 245 VRDGN-VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HhcCC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 01111 112234567889999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-29 Score=220.39 Aligned_cols=170 Identities=16% Similarity=0.186 Sum_probs=135.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCcccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST 80 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~g 80 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||+++.........+
T Consensus 79 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (260)
T cd05611 79 LNGGDCASLIK--TLGGLPEDWAKQYIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVG 155 (260)
T ss_pred cCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEeecccceeccccccCCC
Confidence 47899999994 4467999999999999999999999999 99999999999999999999999999887665566678
Q ss_pred CCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhcc
Q 018381 81 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 160 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 160 (357)
+..|++||.+.+..++.++|+||||+++|+|++|..||............... ...........++..+.++|.+||+
T Consensus 156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~l~ 233 (260)
T cd05611 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR--RINWPEEVKEFCSPEAVDLINRLLC 233 (260)
T ss_pred CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc--ccCCCCcccccCCHHHHHHHHHHcc
Confidence 99999999998887899999999999999999999988654222111100000 0111112233467889999999999
Q ss_pred CCCCCCCCHH---HHHHH
Q 018381 161 YEPRERPNAK---SLVAS 175 (357)
Q Consensus 161 ~~p~~Rps~~---~v~~~ 175 (357)
.+|++||++. +++.+
T Consensus 234 ~~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 234 MDPAKRLGANGYQEIKSH 251 (260)
T ss_pred CCHHHccCCCcHHHHHcC
Confidence 9999999664 55444
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-29 Score=218.18 Aligned_cols=172 Identities=16% Similarity=0.151 Sum_probs=133.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++++|.+++.. ....+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 82 ~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (262)
T cd06613 82 CGGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK 159 (262)
T ss_pred CCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCChhhEEECCCCCEEECccccchhhhhhhhccc
Confidence 367899998842 3468999999999999999999999999 999999999999999999999999998754432 2
Q ss_pred ccccCCCCCCccccccC---CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTG---RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...++..|++||.+.+. .++.++|+|||||++|+|++|+.|+................... .....+...+.++.+
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 238 (262)
T cd06613 160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPP-PKLKDKEKWSPVFHD 238 (262)
T ss_pred cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-ccccchhhhhHHHHH
Confidence 34678899999999776 78889999999999999999998876432111100000000000 111123345678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
++.+||..+|.+|||+.+++.+
T Consensus 239 li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 239 FIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred HHHHHcCCChhhCCCHHHHhcC
Confidence 9999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-29 Score=230.02 Aligned_cols=172 Identities=22% Similarity=0.322 Sum_probs=151.1
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCccc--
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYS-- 79 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-- 79 (357)
|-|.|..||. .++..|+..+...++.||+.||.|||++. +|||||...|||+.....|||+|||+++...+...+.
T Consensus 473 ~~GELr~yLq-~nk~sL~l~tL~ly~~Qi~talaYLeSkr-fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS 550 (974)
T KOG4257|consen 473 PLGELREYLQ-QNKDSLPLRTLTLYCYQICTALAYLESKR-FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS 550 (974)
T ss_pred cchhHHHHHH-hccccchHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhheeecCcceeeecccchhhhccccchhhcc
Confidence 5689999994 57788999999999999999999999998 9999999999999999999999999999877655332
Q ss_pred -c--CCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 80 -T--NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 80 -g--t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
| .+-|||||-+....++.+||||-|||++||++. |..||.+ ..+..++..++..-+.+.|+.||+.+..|+
T Consensus 551 ~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg-----vkNsDVI~~iEnGeRlP~P~nCPp~LYslm 625 (974)
T KOG4257|consen 551 RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG-----VKNSDVIGHIENGERLPCPPNCPPALYSLM 625 (974)
T ss_pred ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc-----ccccceEEEecCCCCCCCCCCCChHHHHHH
Confidence 2 467999999999999999999999999999975 7788776 455666666777777788999999999999
Q ss_pred HHhccCCCCCCCCHHHHHHHhCccc
Q 018381 156 SRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
.+||.++|.+||++.++...|..+.
T Consensus 626 skcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 626 SKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred HHHhccCcccCCcHHHHHHHHHHHH
Confidence 9999999999999999988875543
|
|
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=224.21 Aligned_cols=168 Identities=20% Similarity=0.262 Sum_probs=133.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
+++++|.+++ ..+.+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++..... ..
T Consensus 101 ~~~~~L~~~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~ 176 (292)
T cd06658 101 LEGGALTDIV---THTRMNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK 176 (292)
T ss_pred CCCCcHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCc
Confidence 4789999988 3456999999999999999999999999 99999999999999999999999999864432 22
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...++..|+|||.+.+..++.++|+||||+++|||++|+.||......... ..+......... .....+..+.+++.
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~li~ 253 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM-RRIRDNLPPRVK--DSHKVSSVLRGFLD 253 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhcCCCccc--cccccCHHHHHHHH
Confidence 346889999999998888899999999999999999999987643211100 001111111111 12235667999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|.+|||+.+++++
T Consensus 254 ~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 254 LMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHccCChhHCcCHHHHhhC
Confidence 9999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-29 Score=227.38 Aligned_cols=172 Identities=19% Similarity=0.166 Sum_probs=130.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++.+ .+..+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 83 ~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (331)
T cd05597 83 YVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLG-YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS 160 (331)
T ss_pred CCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc
Confidence 579999999942 3567999999999999999999999999 9999999999999999999999999987543322
Q ss_pred -ccccCCCCCCcccccc-----CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 77 -SYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...||+.|+|||++.. +.++.++|||||||++|+|++|+.||....................+. ......++.
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~ 239 (331)
T cd05597 161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFP-PDVTDVSEE 239 (331)
T ss_pred cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCC-CccCCCCHH
Confidence 2468999999999863 456789999999999999999999986542211111100000000011 112235678
Q ss_pred HHHHHHHhccCCCCC--CCCHHHHHHH
Q 018381 151 LVRLASRCLQYEPRE--RPNAKSLVAS 175 (357)
Q Consensus 151 ~~~li~~cl~~~p~~--Rps~~~v~~~ 175 (357)
+.++|.+||..++++ |+++.+++.|
T Consensus 240 ~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 240 AKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHHHHHHHccCcccccCCCCHHHHhcC
Confidence 999999988654443 7899999998
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=223.51 Aligned_cols=172 Identities=20% Similarity=0.246 Sum_probs=141.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC---c
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---S 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~ 77 (357)
|-||+|.=+|....+..|++..++.++.+|+.||++||... ||.|||||+|||+|+.|++.|+|+|+|.....+. .
T Consensus 267 MNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~-iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~ 345 (591)
T KOG0986|consen 267 MNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR-IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRG 345 (591)
T ss_pred ecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc-eeeccCChhheeeccCCCeEeeccceEEecCCCCcccc
Confidence 67999999997666678999999999999999999999999 9999999999999999999999999999877665 3
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
.+||.+|||||++.++.|+...|-|||||++|||+.|+.||....... ....+.+.+- .-..+++...+++.++|.+.
T Consensus 346 rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv-k~eEvdrr~~-~~~~ey~~kFS~eakslc~~ 423 (591)
T KOG0986|consen 346 RVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV-KREEVDRRTL-EDPEEYSDKFSEEAKSLCEG 423 (591)
T ss_pred ccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh-hHHHHHHHHh-cchhhcccccCHHHHHHHHH
Confidence 478999999999999999999999999999999999999987542211 1111111111 11234667788999999999
Q ss_pred hccCCCCCCCC-----HHHHHHH
Q 018381 158 CLQYEPRERPN-----AKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rps-----~~~v~~~ 175 (357)
.|++||.+|.- +.+|.+|
T Consensus 424 LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 424 LLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred HHccCHHHhccCCCcCcchhhhC
Confidence 99999999964 4455554
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=232.50 Aligned_cols=170 Identities=18% Similarity=0.255 Sum_probs=129.1
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----Cc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KS 77 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~ 77 (357)
+++|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... ..
T Consensus 87 ~~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~ 163 (372)
T cd07853 87 QSDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAG-ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQ 163 (372)
T ss_pred ccCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHHEEECCCCCEEeccccceeecccCccccCCC
Confidence 356777773 4568999999999999999999999999 999999999999999999999999998754322 22
Q ss_pred cccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhc--------Ccc----------cc-cccc
Q 018381 78 YSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG--------KNF----------LM-LMDS 137 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~--------~~~----------~~-~~~~ 137 (357)
..+|+.|+|||++.+. .++.++|||||||++|||++|+.||.......... ... .. ....
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 243 (372)
T cd07853 164 EVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRG 243 (372)
T ss_pred CCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhC
Confidence 3578899999998874 46889999999999999999998886432110000 000 00 0000
Q ss_pred ccC-------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 CLE-------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 ~~~-------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
... .......++++.++|.+||..||++|||+.+++.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 244 PHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred CCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000 01122346789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=229.18 Aligned_cols=169 Identities=18% Similarity=0.244 Sum_probs=134.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCccccc----CCCC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS----RDGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~----~~~~ 76 (357)
|+||.....+.+ =+++|++.++.-++.|++.||.|||+++ |||||||..|||++-+|.++|+|||.+-.. ....
T Consensus 111 C~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~~-iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRD 188 (1187)
T KOG0579|consen 111 CGGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQN-IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRD 188 (1187)
T ss_pred cCCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhcc-hhhhhccccceEEEecCcEeeecccccccchhHHhhhc
Confidence 567777776643 4789999999999999999999999999 999999999999999999999999986422 2335
Q ss_pred ccccCCCCCCccccc-----cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhc-CccccccccccCCCCChhhHHH
Q 018381 77 SYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-KNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
+++|||.|||||++. ..+|+.++||||||++|.||..+.+|...- +.++. ..+.+.-++.+ --|...+..
T Consensus 189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel--npMRVllKiaKSePPTL--lqPS~Ws~~ 264 (1187)
T KOG0579|consen 189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL--NPMRVLLKIAKSEPPTL--LQPSHWSRS 264 (1187)
T ss_pred cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc--chHHHHHHHhhcCCCcc--cCcchhhhH
Confidence 889999999999875 478999999999999999999998664321 11111 11111112222 235567788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.+|+.+||.++|..||++.++++|
T Consensus 265 F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 265 FSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HHHHHHHHHhcCCccCCCHHHHhhC
Confidence 9999999999999999999999987
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=232.36 Aligned_cols=158 Identities=20% Similarity=0.291 Sum_probs=126.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC------CccccCCCCCCcccc
Q 018381 17 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYL 90 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~ 90 (357)
.+++.+++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... ....++..|+|||++
T Consensus 235 ~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~ 313 (401)
T cd05107 235 ALSYMDLVGFSYQVANGMEFLASKN-CVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESI 313 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCC-cCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHh
Confidence 5788899999999999999999999 999999999999999999999999998754321 123467889999999
Q ss_pred ccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCH
Q 018381 91 RTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 169 (357)
Q Consensus 91 ~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~ 169 (357)
.+..++.++|||||||++|||++ |..|+........ ....+....+...+..++..+.+++.+||..+|.+||++
T Consensus 314 ~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~ 389 (401)
T cd05107 314 FNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ----FYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDF 389 (401)
T ss_pred cCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH----HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCH
Confidence 88888999999999999999998 7777654321111 001111111223344567889999999999999999999
Q ss_pred HHHHHHhCcc
Q 018381 170 KSLVASLTPL 179 (357)
Q Consensus 170 ~~v~~~l~~~ 179 (357)
.+|+..|+.+
T Consensus 390 ~ell~~L~~~ 399 (401)
T cd05107 390 SQLVHLVGDL 399 (401)
T ss_pred HHHHHHHHHH
Confidence 9999998765
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-29 Score=219.03 Aligned_cols=173 Identities=20% Similarity=0.280 Sum_probs=133.9
Q ss_pred CCCCchhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC---
Q 018381 1 MPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 76 (357)
++|++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~-i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~ 159 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT 159 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc
Confidence 47899999995322 257999999999999999999999999 9999999999999999999999999987544322
Q ss_pred -----ccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCC-ChhhHH
Q 018381 77 -----SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF-SNDDGT 149 (357)
Q Consensus 77 -----~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 149 (357)
...++..|++||++... .++.++|+|||||++|+|++|+.||............... ......... ....++
T Consensus 160 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 238 (267)
T cd06610 160 RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN-DPPSLETGADYKKYSK 238 (267)
T ss_pred ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC-CCCCcCCccccccccH
Confidence 23578899999998876 6788999999999999999999987543211100000000 111111111 124567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+.+++.+||..+|++|||+.+++.|
T Consensus 239 ~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 239 SFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 89999999999999999999999886
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-29 Score=219.89 Aligned_cols=167 Identities=17% Similarity=0.211 Sum_probs=133.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
++||+|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++....
T Consensus 88 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 164 (265)
T cd06652 88 MPGGSIKDQLK--SYGALTENVTRKYTRQILEGVSYLHSNM-IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGT 164 (265)
T ss_pred cCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEecCCCCEEECcCcccccccccccccc
Confidence 47899999995 3456899999999999999999999999 99999999999999999999999999874432
Q ss_pred -CCccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 75 -GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 75 -~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
.....++..|+|||++.+..++.++|+|||||++|+|++|+.||........ .............+...+..+.+
T Consensus 165 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 240 (265)
T cd06652 165 GMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA----IFKIATQPTNPVLPPHVSDHCRD 240 (265)
T ss_pred ccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH----HHHHhcCCCCCCCchhhCHHHHH
Confidence 2234678899999999888889999999999999999999988754311111 11111111122345556678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
++.+||. +|++||++.+++.+
T Consensus 241 ~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 241 FLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred HHHHHhc-ChhhCCCHHHHhcC
Confidence 9999995 99999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-29 Score=226.19 Aligned_cols=170 Identities=21% Similarity=0.197 Sum_probs=135.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++....+..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (316)
T cd05574 83 CPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG-IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS 161 (316)
T ss_pred cCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChHHeEEcCCCCEEEeecchhhcccccccccc
Confidence 36889999996444578999999999999999999999999 999999999999999999999999997643221
Q ss_pred ----------------------------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhh
Q 018381 76 ----------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR 127 (357)
Q Consensus 76 ----------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~ 127 (357)
....||..|+|||++.+..++.++||||||+++|+|++|+.||.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~ 241 (316)
T cd05574 162 KALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETF 241 (316)
T ss_pred cccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHH
Confidence 1235788999999999888899999999999999999999998654322111
Q ss_pred cCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC----HHHHHHH
Q 018381 128 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN----AKSLVAS 175 (357)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps----~~~v~~~ 175 (357)
................+..+.++|.+||..+|++||+ +.+++.+
T Consensus 242 ----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 242 ----SNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred ----HHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 1111111111112225788999999999999999999 8888876
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-29 Score=218.03 Aligned_cols=169 Identities=21% Similarity=0.250 Sum_probs=135.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-CeEEecCCcccccCCC---C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDG---K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~---~ 76 (357)
+++|+|.+++....+..+++..++.++.|++.||.|||+++ ++|+||||+||+++.++ .+||+|||++...... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL-ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 47899999996544567999999999999999999999999 99999999999998554 5899999998865433 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...++..|+|||.+.+...+.++||||||+++|+|++|+.|+........... .... .....+...+..+.+++.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~l~~li~ 234 (256)
T cd08220 160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLK----IMSG-TFAPISDRYSPDLRQLIL 234 (256)
T ss_pred ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHH----HHhc-CCCCCCCCcCHHHHHHHH
Confidence 34678899999999988889999999999999999999988765422211111 1111 111234456778999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|++|||+.+++.+
T Consensus 235 ~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 235 SMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HHccCChhhCCCHHHHhhC
Confidence 9999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-29 Score=223.80 Aligned_cols=168 Identities=18% Similarity=0.265 Sum_probs=134.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
++||+|.+++ ....+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .
T Consensus 98 ~~~~~L~~~~---~~~~~~~~~~~~~~~~l~~~L~~LH~~~-i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~ 173 (297)
T cd06656 98 LAGGSLTDVV---TETCMDEGQIAAVCRECLQALDFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 173 (297)
T ss_pred cCCCCHHHHH---HhCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEECcCccceEccCCccCcC
Confidence 4789999999 3467899999999999999999999999 999999999999999999999999998754432 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...+++.|++||.+.+..++.++|+|||||++|+|++|..||....... . ..............+...+..+.+++.
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~li~ 250 (297)
T cd06656 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR--A-LYLIATNGTPELQNPERLSAVFRDFLN 250 (297)
T ss_pred cccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch--h-eeeeccCCCCCCCCccccCHHHHHHHH
Confidence 3467889999999998888999999999999999999998875432110 0 000000111111123445677999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|++||++.+++.+
T Consensus 251 ~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 251 RCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred HHccCChhhCcCHHHHhcC
Confidence 9999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-29 Score=218.15 Aligned_cols=169 Identities=19% Similarity=0.292 Sum_probs=133.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ..+.+++..++.++.|++.|+.|||+.+ ++|+||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (256)
T cd05112 81 MEHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS 158 (256)
T ss_pred CCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccccceEEEcCCCeEEECCCcceeecccCccccc
Confidence 468999999853 3467899999999999999999999999 9999999999999999999999999987543321
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|+|||++.++.++.++|+||||+++|||++ |..||.......+... .........+...+..+.++
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l 233 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVET-----INAGFRLYKPRLASQSVYEL 233 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH-----HhCCCCCCCCCCCCHHHHHH
Confidence 2234578999999998889999999999999999998 8777654322211111 01111111223346789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 018381 155 ASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l 176 (357)
+.+||..+|++|||+.++++.|
T Consensus 234 ~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 234 MQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHHHcccChhhCCCHHHHHHhh
Confidence 9999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-29 Score=225.94 Aligned_cols=170 Identities=21% Similarity=0.196 Sum_probs=140.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC----CCeEEecCCcccccCCC-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD----GNPRLSCFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~~~~~~~~- 75 (357)
+.||.|++.|... .+++..+..++.||+.++.|||+.+ |+||||||+|+|+... +.+|++|||++......
T Consensus 118 ~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g-vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~ 193 (382)
T KOG0032|consen 118 CEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG-VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE 193 (382)
T ss_pred cCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc
Confidence 4689999999754 4999999999999999999999999 9999999999999633 57999999999977763
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...+||+.|+|||++....++..+||||+||++|.|++|..||........... ....+..+..+.-...+....+
T Consensus 194 ~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~--i~~~~~~f~~~~w~~is~~akd 271 (382)
T KOG0032|consen 194 RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLA--ILRGDFDFTSEPWDDISESAKD 271 (382)
T ss_pred eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHH--HHcCCCCCCCCCccccCHHHHH
Confidence 356899999999999989999999999999999999999999887643222111 1111112333334456889999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 018381 154 LASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l 176 (357)
+|..|+..||.+|+|+.++++|-
T Consensus 272 ~i~~ll~~dp~~R~ta~~~L~Hp 294 (382)
T KOG0032|consen 272 FIRKLLEFDPRKRLTAAQALQHP 294 (382)
T ss_pred HHHHhcccCcccCCCHHHHhcCc
Confidence 99999999999999999999973
|
|
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-29 Score=227.61 Aligned_cols=172 Identities=17% Similarity=0.153 Sum_probs=131.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. .+..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 83 ~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~~-iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 160 (331)
T cd05624 83 YVGGDLLTLLSK-FEDRLPEDMARFYIAEMVLAIHSIHQLH-YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS 160 (331)
T ss_pred CCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee
Confidence 579999999953 3568999999999999999999999999 9999999999999999999999999987554322
Q ss_pred -ccccCCCCCCcccccc-----CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 77 -SYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...||+.|+|||++.+ +.++.++|+|||||++|+|++|+.||....................+. .....+++.
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p-~~~~~~~~~ 239 (331)
T cd05624 161 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP-SHITDVSEE 239 (331)
T ss_pred ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCC-CccccCCHH
Confidence 2468999999999875 467889999999999999999999986542211111100000000011 111235678
Q ss_pred HHHHHHHhccCCCCC--CCCHHHHHHH
Q 018381 151 LVRLASRCLQYEPRE--RPNAKSLVAS 175 (357)
Q Consensus 151 ~~~li~~cl~~~p~~--Rps~~~v~~~ 175 (357)
+.++|.+||..++++ |+++.++++|
T Consensus 240 ~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 240 AKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred HHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 999999999876654 4688989887
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-29 Score=220.97 Aligned_cols=169 Identities=21% Similarity=0.235 Sum_probs=134.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC--CCcc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--~~~~ 78 (357)
++||+|.+++. ..+.+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.... ....
T Consensus 79 ~~g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (278)
T cd05606 79 MNGGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 155 (278)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCc
Confidence 47899999984 4567999999999999999999999999 99999999999999999999999999875432 2345
Q ss_pred ccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 79 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
.|+..|+|||++.++ .++.++|+||+||++|+|++|+.||.......... ..... .......+...+..+.+++.+
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~--~~~~~-~~~~~~~~~~~s~~~~~li~~ 232 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMT-LTMAVELPDSFSPELRSLLEG 232 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH--HHHHh-hccCCCCCCcCCHHHHHHHHH
Confidence 789999999999754 57899999999999999999999886531110000 00000 011122344457889999999
Q ss_pred hccCCCCCCC-----CHHHHHHH
Q 018381 158 CLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rp-----s~~~v~~~ 175 (357)
||..+|.+|| ++.+++++
T Consensus 233 ~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 233 LLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred HhhcCHHhccCCCCCCHHHHHhC
Confidence 9999999999 99999876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-29 Score=225.21 Aligned_cols=172 Identities=13% Similarity=0.212 Sum_probs=124.0
Q ss_pred CCchhhhhcc-------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee----CCCCCeEEecCCcccc
Q 018381 3 NETLSKHLFH-------WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKN 71 (357)
Q Consensus 3 ~gsL~~~l~~-------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~~~~ 71 (357)
+++|.+++.. .....+++..+..++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||+++.
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 3566666531 12246899999999999999999999999 9999999999999 5667899999999985
Q ss_pred cCCC-------CccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC--------------
Q 018381 72 SRDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-------------- 129 (357)
Q Consensus 72 ~~~~-------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-------------- 129 (357)
.... ....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.....+.....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 5432 23467899999999876 4578899999999999999999988753211100000
Q ss_pred ------cccc---------ccccccC------------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 130 ------NFLM---------LMDSCLE------------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 130 ------~~~~---------~~~~~~~------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+.. ....... ..........+.+++.+||+.||.+|||+.+++.|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000 0000000 00011123568889999999999999999999976
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-29 Score=222.78 Aligned_cols=161 Identities=20% Similarity=0.265 Sum_probs=125.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---CccccCCCCCCccc
Q 018381 14 ENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYSTNLAFTPPEY 89 (357)
Q Consensus 14 ~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~ 89 (357)
....+++..+..++.|++.||.|||+. + ++||||||+||+++.++.+||+|||+++..... ....|++.|+|||+
T Consensus 100 ~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~ 178 (288)
T cd06616 100 LKSVIPEEILGKIAVATVKALNYLKEELK-IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPER 178 (288)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHHhhcCC-eeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccCccCHHH
Confidence 357899999999999999999999985 7 999999999999999999999999998754332 23467899999999
Q ss_pred cccC---CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCC
Q 018381 90 LRTG---RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 166 (357)
Q Consensus 90 ~~~~---~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 166 (357)
+.+. .++.++|||||||++|+|++|+.||..................+.+....+..++..+.++|.+||+.+|++|
T Consensus 179 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 258 (288)
T cd06616 179 IDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKR 258 (288)
T ss_pred hccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhC
Confidence 9775 6788999999999999999999887643211000001001111112222223467789999999999999999
Q ss_pred CCHHHHHHH
Q 018381 167 PNAKSLVAS 175 (357)
Q Consensus 167 ps~~~v~~~ 175 (357)
||+.+|+.+
T Consensus 259 pt~~~i~~~ 267 (288)
T cd06616 259 PKYKELLEH 267 (288)
T ss_pred cCHHHHhcC
Confidence 999999987
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-29 Score=220.10 Aligned_cols=172 Identities=20% Similarity=0.257 Sum_probs=133.0
Q ss_pred CCCchhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC-
Q 018381 2 PNETLSKHLFHW----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 76 (357)
Q Consensus 2 ~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 76 (357)
++|+|.+++... ....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~ 168 (273)
T cd05074 90 KHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDY 168 (273)
T ss_pred CCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccchhhEEEcCCCCEEECcccccccccCCcc
Confidence 578898887421 2235899999999999999999999999 9999999999999999999999999988554321
Q ss_pred -----ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 77 -----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 77 -----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...+++.|++||.+.+..++.++|||||||++|+|++ |+.|+.......... ..........+...+..
T Consensus 169 ~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 243 (273)
T cd05074 169 YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYN-----YLIKGNRLKQPPDCLED 243 (273)
T ss_pred eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHH-----HHHcCCcCCCCCCCCHH
Confidence 2234578999999988888999999999999999999 776664432111110 00000111123345678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
+.+++.+||..+|++|||+.+++..|+.+
T Consensus 244 ~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 244 VYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 99999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-29 Score=217.34 Aligned_cols=170 Identities=23% Similarity=0.349 Sum_probs=133.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.......+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.......
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (258)
T smart00219 83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN-FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKK 161 (258)
T ss_pred cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC-eeecccccceEEEccCCeEEEcccCCceeccccccccc
Confidence 46899999995322223999999999999999999999999 99999999999999999999999999876554321
Q ss_pred --cccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 78 --YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 78 --~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
..+++.|++||.+.+..++.++|+||||+++|+|++ |..|+.......+.. ..........+...+..+.++
T Consensus 162 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 236 (258)
T smart00219 162 KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLE-----YLKKGYRLPKPENCPPEIYKL 236 (258)
T ss_pred ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHhcCCCCCCCCcCCHHHHHH
Confidence 225688999999988888999999999999999998 666654322111111 011111122334467889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 018381 155 ASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l 176 (357)
+.+||..+|++|||+.++++.|
T Consensus 237 i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 237 MLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHCcCChhhCcCHHHHHhhC
Confidence 9999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=217.60 Aligned_cols=172 Identities=20% Similarity=0.267 Sum_probs=133.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++.....
T Consensus 90 ~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 166 (272)
T cd06629 90 VPGGSIGSCLR--TYGRFEEQLVRFFTEQVLEGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQ 166 (272)
T ss_pred CCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHhhCC-eeecCCChhhEEEcCCCeEEEeeccccccccccccccc
Confidence 47899999995 3368999999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccCCCCCCccccccCC--CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
....++..|++||++.... ++.++|+||||+++|++++|..|+....................+.......++..+.
T Consensus 167 ~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T cd06629 167 NMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVAL 246 (272)
T ss_pred cccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHH
Confidence 2345788999999987654 7889999999999999999998875431110000000011111111122234578899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 018381 153 RLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
++|.+||..+|++|||+.+++.+
T Consensus 247 ~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 247 DFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred HHHHHHhcCChhhCCCHHHHhhC
Confidence 99999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.6e-29 Score=220.57 Aligned_cols=168 Identities=19% Similarity=0.251 Sum_probs=133.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
++|++|.+++. .+.+++.++..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... .
T Consensus 98 ~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 173 (285)
T cd06648 98 LEGGALTDIVT---HTRMNEEQIATVCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK 173 (285)
T ss_pred cCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccc
Confidence 46899999994 367999999999999999999999999 999999999999999999999999987644322 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...|+..|+|||.+.+..++.++|+|||||++|+|++|+.||.......... .......... ..+..++..+.+++.
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~l~~li~ 250 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMK-RIRDNLPPKL--KNLHKVSPRLRSFLD 250 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHH-HHHhcCCCCC--cccccCCHHHHHHHH
Confidence 3468899999999988888999999999999999999998876432111100 0111111111 112235678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|++|||+.+++++
T Consensus 251 ~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 251 RMLVRDPAQRATAAELLNH 269 (285)
T ss_pred HHcccChhhCcCHHHHccC
Confidence 9999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=219.75 Aligned_cols=170 Identities=15% Similarity=0.184 Sum_probs=131.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
++||+|..++.. ....+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 91 ~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 168 (292)
T cd06644 91 CPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMK-IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRD 168 (292)
T ss_pred CCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCC-eeecCCCcceEEEcCCCCEEEccCccceeccccccccc
Confidence 478899888742 3567999999999999999999999999 999999999999999999999999987643322 2
Q ss_pred ccccCCCCCCcccccc-----CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 77 SYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
...+++.|+|||++.+ ..++.++|+|||||++|+|++|..||......... ........+ ....+...+.++
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~ 245 (292)
T cd06644 169 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL-LKIAKSEPP--TLSQPSKWSMEF 245 (292)
T ss_pred eecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHH-HHHhcCCCc--cCCCCcccCHHH
Confidence 4467889999999853 44677999999999999999999887543211100 001111111 111233456789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 018381 152 VRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.++|.+||..+|++||++.+++++
T Consensus 246 ~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 246 RDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred HHHHHHHhcCCcccCcCHHHHhcC
Confidence 999999999999999999999886
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=221.59 Aligned_cols=174 Identities=19% Similarity=0.289 Sum_probs=133.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeecCCCCCeeeCCCCCeEEecCCcccccCC--CCc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--~~~ 77 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||++ + ++|+||||+|||++.++.+||+|||++..... ...
T Consensus 81 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 157 (308)
T cd06615 81 MDGGSLDQVLK--KAGRIPENILGKISIAVLRGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 157 (308)
T ss_pred cCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EEECCCChHHEEEecCCcEEEccCCCccccccccccc
Confidence 47899999995 347799999999999999999999985 6 99999999999999999999999999875433 234
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhc---Ccccccc-------------------
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG---KNFLMLM------------------- 135 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~---~~~~~~~------------------- 135 (357)
..++..|+|||++.+..++.++|+|||||++|+|++|+.|+.......... .......
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (308)
T cd06615 158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPM 237 (308)
T ss_pred CCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchh
Confidence 578899999999988888999999999999999999998875432111100 0000000
Q ss_pred ------cc---ccCCCCC-hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 136 ------DS---CLEGHFS-NDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 136 ------~~---~~~~~~~-~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+. ......+ ...+.++.++|.+||..+|++|||+.+++.+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 289 (308)
T cd06615 238 AIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289 (308)
T ss_pred hHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 00 0000011 124567999999999999999999999999843
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=218.78 Aligned_cols=172 Identities=13% Similarity=0.126 Sum_probs=132.7
Q ss_pred CCCCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---
Q 018381 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 75 (357)
++||+|.+++.. ..+..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~ 180 (286)
T cd06638 102 CNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK-TIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR 180 (286)
T ss_pred cCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC-ccccCCCHHhEEECCCCCEEEccCCceeecccCCCc
Confidence 478999998742 23467899999999999999999999999 999999999999999999999999998754432
Q ss_pred -CccccCCCCCCcccccc-----CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHH
Q 018381 76 -KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 149 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
....|++.|+|||++.. ..++.++|+|||||++|+|++|+.|+......... ......... ....+...+.
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~ 257 (286)
T cd06638 181 RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL-FKIPRNPPP--TLHQPELWSN 257 (286)
T ss_pred cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH-hhccccCCC--cccCCCCcCH
Confidence 23468899999998853 44788999999999999999999887643211100 000111101 1112233456
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
.+.++|.+||+.+|++|||+.++++++
T Consensus 258 ~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 258 EFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 799999999999999999999999874
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=247.85 Aligned_cols=168 Identities=17% Similarity=0.233 Sum_probs=137.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
|.+|+|.+.+. .++..++.-...+..|++.|+.|||+.| ||||||||.||+++.+|.+|++|||.|......
T Consensus 1316 C~~GsLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~g-IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1316 CEGGSLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHG-IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred hccCcHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcC-ceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence 57999999994 5667788888889999999999999999 999999999999999999999999999855443
Q ss_pred ---CccccCCCCCCccccccCC---CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHH
Q 018381 76 ---KSYSTNLAFTPPEYLRTGR---VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 149 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
....||+.|||||++.+.+ -..+.||||+|||+.||+||+.||.....+ + .+...+...-.+.+|...+.
T Consensus 1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-~---aIMy~V~~gh~Pq~P~~ls~ 1468 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-W---AIMYHVAAGHKPQIPERLSS 1468 (1509)
T ss_pred HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-h---HHHhHHhccCCCCCchhhhH
Confidence 2457999999999998744 345899999999999999999998643111 1 11112222334456777899
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+..++|..||+.||+.|-++.|++++
T Consensus 1469 ~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1469 EGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred hHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 99999999999999999999999887
|
|
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-29 Score=218.83 Aligned_cols=169 Identities=17% Similarity=0.233 Sum_probs=134.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
++||+|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 84 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (265)
T cd06631 84 VPGGSISSILN--RFGPLPEPVFCKYTKQILDGVAYLHNNC-VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGT 160 (265)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccc
Confidence 47899999994 3467899999999999999999999999 99999999999999999999999999874321
Q ss_pred ----CCccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 75 ----GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 75 ----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
.....++..|+|||++.+..++.++|+|||||++|+|++|..||....... ....... ........+...+..
T Consensus 161 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~ 237 (265)
T cd06631 161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA--AMFYIGA-HRGLMPRLPDSFSAA 237 (265)
T ss_pred ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH--HHHHhhh-ccCCCCCCCCCCCHH
Confidence 123457889999999998888999999999999999999998876421110 0000000 001112234456788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.++|++||..+|++||++.+++.+
T Consensus 238 ~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 238 AIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred HHHHHHHHhcCCcccCCCHHHHhcC
Confidence 9999999999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=220.23 Aligned_cols=171 Identities=14% Similarity=0.099 Sum_probs=131.7
Q ss_pred CCCCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---
Q 018381 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 75 (357)
++||+|.+++.. ..+..+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 106 ~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~ 184 (291)
T cd06639 106 CNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR-IIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR 184 (291)
T ss_pred CCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEeecccchhccccccc
Confidence 468999998842 23567999999999999999999999999 999999999999999999999999998754432
Q ss_pred -CccccCCCCCCccccccC-----CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHH
Q 018381 76 -KSYSTNLAFTPPEYLRTG-----RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 149 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
....++..|+|||++... .++.++|+|||||++|+|++|+.|+......... ......... ....+...+.
T Consensus 185 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~ 261 (291)
T cd06639 185 RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTL-FKIPRNPPP--TLLHPEKWCR 261 (291)
T ss_pred ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHH-HHHhcCCCC--CCCcccccCH
Confidence 234678899999998643 2578999999999999999999887643211000 000000000 1111233456
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+.++|.+||+.+|++||++.+++.|
T Consensus 262 ~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 262 SFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 79999999999999999999999986
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=215.91 Aligned_cols=169 Identities=17% Similarity=0.234 Sum_probs=136.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.......+++.+++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 46889999986444457899999999999999999999999 9999999999999999999999999987554432
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...|++.|+|||++.++..+.++|+|||||++++|++|+.|+........... ..... ....+...+..+.++|.
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~li~ 234 (256)
T cd08218 160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLK----IIRGS-YPPVSSHYSYDLRNLVS 234 (256)
T ss_pred hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHH----HhcCC-CCCCcccCCHHHHHHHH
Confidence 34578899999999888889999999999999999999988764322211111 01111 11234456778999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|++||++.+|+++
T Consensus 235 ~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 235 QLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHhhCChhhCcCHHHHhhC
Confidence 9999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-29 Score=219.79 Aligned_cols=172 Identities=19% Similarity=0.306 Sum_probs=134.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~ 77 (357)
+++++|.+++.. ....+++..+..++.|++.||.|||+ .+ ++|+||||+||+++.++.++|+|||.+...... ..
T Consensus 81 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~-i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 158 (265)
T cd06605 81 MDGGSLDKILKE-VQGRIPERILGKIAVAVLKGLTYLHEKHK-IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT 158 (265)
T ss_pred cCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHcCCCC-eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc
Confidence 467899999953 23789999999999999999999999 88 999999999999999999999999998754322 23
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhc-CccccccccccCCCCChh-hHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-KNFLMLMDSCLEGHFSND-DGTELVRLA 155 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~li 155 (357)
..++..|+|||++.+..++.++|+||||+++|+|++|+.|+.......... .......... ....+.. .+..+.++|
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li 237 (265)
T cd06605 159 FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP-PPRLPSGKFSPDFQDFV 237 (265)
T ss_pred ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-CCCCChhhcCHHHHHHH
Confidence 568889999999998889999999999999999999998876431000000 0000111111 1112222 667899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 018381 156 SRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+||..+|++|||+.+++.+
T Consensus 238 ~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 238 NLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred HHHcCCCchhCcCHHHHhhC
Confidence 99999999999999999876
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=221.63 Aligned_cols=168 Identities=21% Similarity=0.253 Sum_probs=133.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++ ....+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 100 ~~~~~L~~~~---~~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~ 175 (297)
T cd06659 100 LQGGALTDIV---SQTRLNEEQIATVCESVLQALCYLHSQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 175 (297)
T ss_pred CCCCCHHHHH---hhcCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHeEEccCCcEEEeechhHhhccccccccc
Confidence 4788999888 3467999999999999999999999999 999999999999999999999999998754322 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...++..|+|||++.+..++.++|||||||++|||++|+.||......... ..+....... .......+..+.++|.
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~l~~~i~ 252 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM-KRLRDSPPPK--LKNAHKISPVLRDFLE 252 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHhccCCCC--ccccCCCCHHHHHHHH
Confidence 456889999999998888999999999999999999999887643211100 0000000000 1112345677999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|++||++.+++.+
T Consensus 253 ~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 253 RMLTREPQERATAQELLDH 271 (297)
T ss_pred HHhcCCcccCcCHHHHhhC
Confidence 9999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-29 Score=217.58 Aligned_cols=169 Identities=20% Similarity=0.242 Sum_probs=137.9
Q ss_pred CCCCchhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHh-----cCCCceeecCCCCCeeeCCCCCeEEecCCcccccC
Q 018381 1 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCS-----SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH-----~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 73 (357)
+++|+|.+++... ....+++.+++.++.||+.||.||| +.+ ++|+||||+||+++.++.+||+|||++....
T Consensus 83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~-i~h~dl~p~nili~~~~~~kl~d~g~~~~~~ 161 (265)
T cd08217 83 CEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT-VLHRDLKPANIFLDANNNVKLGDFGLAKILG 161 (265)
T ss_pred ccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc-ceecCCCHHHEEEecCCCEEEeccccccccc
Confidence 4688999998532 2568999999999999999999999 888 9999999999999999999999999988655
Q ss_pred CCC----ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHH
Q 018381 74 DGK----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 149 (357)
Q Consensus 74 ~~~----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
... ...++..|++||++.+..++.++|+||||+++|+|++|+.|+.......+. ..+........+...+.
T Consensus 162 ~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 236 (265)
T cd08217 162 HDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLA-----SKIKEGKFRRIPYRYSS 236 (265)
T ss_pred CCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHH-----HHHhcCCCCCCccccCH
Confidence 433 346789999999998888899999999999999999999887654322211 11111111234455678
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+.+++.+||..+|++||++.+|+++
T Consensus 237 ~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 237 ELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhhC
Confidence 89999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=218.18 Aligned_cols=171 Identities=14% Similarity=0.141 Sum_probs=132.1
Q ss_pred CCCCchhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---
Q 018381 1 MPNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 75 (357)
+++++|.+++.... +..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++......
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~ 169 (275)
T cd06608 91 CGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK-VIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGR 169 (275)
T ss_pred CCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEEccCCeEEECCCccceecccchhh
Confidence 46889999885322 578999999999999999999999999 999999999999999999999999998754332
Q ss_pred -CccccCCCCCCcccccc-----CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHH
Q 018381 76 -KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 149 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
....++..|+|||++.. ..++.++|||||||++|+|++|+.||......... ......... ....+...+.
T Consensus 170 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~ 246 (275)
T cd06608 170 RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRAL-FKIPRNPPP--TLKSPENWSK 246 (275)
T ss_pred hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHH-HHhhccCCC--CCCchhhcCH
Confidence 24467889999998754 34677899999999999999999887643111110 001111111 1111223567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+.++|.+||..||++|||+.+++.+
T Consensus 247 ~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 247 KFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred HHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 89999999999999999999999876
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-28 Score=219.63 Aligned_cols=169 Identities=21% Similarity=0.286 Sum_probs=129.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--Ccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~ 78 (357)
+++|+|..+. .+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ...
T Consensus 81 ~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 153 (279)
T cd06619 81 MDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK-ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTY 153 (279)
T ss_pred CCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCC
Confidence 3567775442 5789999999999999999999999 999999999999999999999999998754432 345
Q ss_pred ccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhh--cCccccc-cccccCCCCChhhHHHHHHHH
Q 018381 79 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR--GKNFLML-MDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~li 155 (357)
.+|..|+|||++.+..++.++|+|||||++|+|++|+.||......... ....... .............++++.++|
T Consensus 154 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 233 (279)
T cd06619 154 VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFI 233 (279)
T ss_pred CCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHH
Confidence 7899999999999888999999999999999999999887542110000 0000000 000001111223456899999
Q ss_pred HHhccCCCCCCCCHHHHHHHh
Q 018381 156 SRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~l 176 (357)
.+||..+|++||++.+++.+.
T Consensus 234 ~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 234 TQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred HHHhhCChhhCCCHHHHhcCc
Confidence 999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-29 Score=222.14 Aligned_cols=169 Identities=27% Similarity=0.396 Sum_probs=132.9
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC----CCCc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DGKS 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~~ 77 (357)
++|+|.+++. ..+.+++.+++.++.||++||.+||+.+ ++|+||||+||+++.++.++|+|||.+.... ....
T Consensus 81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~-i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKG-IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTT-EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred cccccccccc--cccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence 5679999994 4678999999999999999999999999 9999999999999999999999999987521 2234
Q ss_pred cccCCCCCCccccc-cCCCCccccccchHHHHHHHHhCCCCCCcchhHh---hhcCccccccccccCCCCChhhHHHHHH
Q 018381 78 YSTNLAFTPPEYLR-TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL---IRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 78 ~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
..++..|+|||++. +...+.++|+||+|+++|+|++|..|+....... .............. .........+.+
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 235 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS--QQSREKSEELRD 235 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT--TSHTTSHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc--cccchhHHHHHH
Confidence 56789999999998 7788999999999999999999998887641110 00000000000000 011112478999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+|.+||+.||++|||+.+++++
T Consensus 236 li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 236 LIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHHHSSSSGGGSTTHHHHHTS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999876
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-29 Score=220.57 Aligned_cols=171 Identities=18% Similarity=0.200 Sum_probs=128.6
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
+|+|.+++.. .++.+++..++.++.||++||.|||+++ ++||||||+||+++.++.+||+|||+++..... ...
T Consensus 82 ~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (284)
T cd07839 82 DQDLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHN-VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAE 159 (284)
T ss_pred CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCC
Confidence 4678887743 3567999999999999999999999999 999999999999999999999999998754432 234
Q ss_pred ccCCCCCCccccccCC-CCccccccchHHHHHHHHhCCCCCCcchhH--hhhc-------C------ccccccccc----
Q 018381 79 STNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALD--LIRG-------K------NFLMLMDSC---- 138 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~--~~~~-------~------~~~~~~~~~---- 138 (357)
.+++.|+|||++.+.. ++.++|||||||++|+|++|..|+...... .... . ......+..
T Consensus 160 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07839 160 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPM 239 (284)
T ss_pred ccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCC
Confidence 5688999999987644 688999999999999999999886432110 0000 0 000000000
Q ss_pred cC-----CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 139 LE-----GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 139 ~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.. ....+..++++.++|.+||..||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 240 YPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred CCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 00 01112356789999999999999999999999886
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=217.80 Aligned_cols=172 Identities=21% Similarity=0.290 Sum_probs=133.9
Q ss_pred CCCCchhhhhccCCC-------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC
Q 018381 1 MPNETLSKHLFHWEN-------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 73 (357)
+++|+|.+++..... ..+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.++++|||+++...
T Consensus 90 ~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~ 168 (275)
T cd05046 90 TDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR-FVHRDLAARNCLVSSQREVKVSLLSLSKDVY 168 (275)
T ss_pred cCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC-cccCcCccceEEEeCCCcEEEcccccccccC
Confidence 468999999953321 26999999999999999999999999 9999999999999999999999999986433
Q ss_pred CC-----CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhh
Q 018381 74 DG-----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 147 (357)
Q Consensus 74 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (357)
.. ....++..|++||.+.+..++.++||||||+++|+|++ |..||.......... ...........+..+
T Consensus 169 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~ 244 (275)
T cd05046 169 NSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLN----RLQAGKLELPVPEGC 244 (275)
T ss_pred cccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHH----HHHcCCcCCCCCCCC
Confidence 21 23345678999999988888999999999999999998 666654322111111 111111111223456
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 148 GTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 148 ~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+..+.+++.+||..+|.+|||+.+++..|.
T Consensus 245 ~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 245 PSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 778999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=217.15 Aligned_cols=172 Identities=17% Similarity=0.258 Sum_probs=135.7
Q ss_pred CCCCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-- 75 (357)
++|++|.+++.. .....+++..++.++.|++.||.|||+ .+ ++|+||||+||+++.++.+||+|||++......
T Consensus 91 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 169 (269)
T cd08528 91 IEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR-IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESK 169 (269)
T ss_pred CCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc-eeecCCCHHHEEECCCCcEEEecccceeecccccc
Confidence 468899988742 245679999999999999999999997 56 999999999999999999999999998765543
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....++..|++||++.++.++.++|+||||+++|+|++|+.|+.......... ...............++.+.++
T Consensus 170 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~l 245 (269)
T cd08528 170 LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLAT----KIVEAVYEPLPEGMYSEDVTDV 245 (269)
T ss_pred cccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHH----HHhhccCCcCCcccCCHHHHHH
Confidence 24567889999999998888999999999999999999998875432211111 1111111111112346789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhC
Q 018381 155 ASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
|.+||+.||++||++.++.++++
T Consensus 246 i~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 246 ITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHCCCCCccCCCHHHHHHHhc
Confidence 99999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=214.31 Aligned_cols=162 Identities=22% Similarity=0.285 Sum_probs=129.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
++||+|.+++. ....+++..+..++.|+++||.|||+++ ++||||||+||+++.++.++++|||.+...... ....
T Consensus 67 ~~~~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~ 143 (237)
T cd05576 67 AEGGKLWSHIS--KFLNIPEECVKRWAAEMVVALDALHREG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEA 143 (237)
T ss_pred CCCCCHHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEecccchhccccccccCC
Confidence 47899999995 3456999999999999999999999999 999999999999999999999999987654432 2344
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
++..|+|||...++.++.++|+||+|+++|+|++|..|+...... . ........+...++.+.++|.+||
T Consensus 144 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~~li~~~l 213 (237)
T cd05576 144 VENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------I----NTHTTLNIPEWVSEEARSLLQQLL 213 (237)
T ss_pred cCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------c----ccccccCCcccCCHHHHHHHHHHc
Confidence 577899999998888899999999999999999998765422110 0 000111234456678999999999
Q ss_pred cCCCCCCCCH-----HHHHHH
Q 018381 160 QYEPRERPNA-----KSLVAS 175 (357)
Q Consensus 160 ~~~p~~Rps~-----~~v~~~ 175 (357)
+.||++||++ .+++.|
T Consensus 214 ~~dp~~R~~~~~~~~~~~~~h 234 (237)
T cd05576 214 QFNPTERLGAGVAGVEDIKSH 234 (237)
T ss_pred cCCHHHhcCCCccchHHHHcC
Confidence 9999999986 555543
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-29 Score=229.20 Aligned_cols=170 Identities=19% Similarity=0.295 Sum_probs=144.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCcc--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY-- 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-- 78 (357)
.+.|||.+.|++..+..|.....+.++.||+.||.||.+++ +|||||-..|+|+-.-..|||+||||.+....+..+
T Consensus 192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr-lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv 270 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR-LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV 270 (1039)
T ss_pred cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhhhhheecccceeeeecccceeccCCCCcceE
Confidence 37899999997656788999999999999999999999999 999999999999999889999999999976654422
Q ss_pred -----ccCCCCCCccccccCCCCccccccchHHHHHHHHhC-CCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 79 -----STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG-KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 79 -----~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
.-...|+|||.+...+++.++|||+|||++|||+++ ..||.+. ....+.+.++..-+.+.+..|++++.
T Consensus 271 m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~-----~g~qIL~~iD~~erLpRPk~csedIY 345 (1039)
T KOG0199|consen 271 MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC-----RGIQILKNIDAGERLPRPKYCSEDIY 345 (1039)
T ss_pred ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC-----CHHHHHHhccccccCCCCCCChHHHH
Confidence 225689999999999999999999999999999985 4677664 22334455555555667889999999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHh
Q 018381 153 RLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
+++..||..+|.+|||+..|.+.+
T Consensus 346 ~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 346 QIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHHHhccCCccccccHHHHHHhH
Confidence 999999999999999999997543
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-29 Score=225.50 Aligned_cols=166 Identities=20% Similarity=0.250 Sum_probs=136.8
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCccccCCC
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 83 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~ 83 (357)
||-.|.| +..++++-+.++..|+.+.+.||.|||+.+ .||||||..|||+++.|.|||+|||.+....+..+++|||.
T Consensus 110 GSAsDll-eVhkKplqEvEIAAi~~gaL~gLaYLHS~~-~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPy 187 (948)
T KOG0577|consen 110 GSASDLL-EVHKKPLQEVEIAAITHGALQGLAYLHSHN-RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPY 187 (948)
T ss_pred ccHHHHH-HHHhccchHHHHHHHHHHHHHHHHHHHHhh-HHhhhccccceEecCCCeeeeccccchhhcCchhcccCCcc
Confidence 5556666 346789999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred CCCcccccc---CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhcc
Q 018381 84 FTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 160 (357)
Q Consensus 84 y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 160 (357)
|||||++.- |.|+-+.||||||+++.||.-.++|.++... +-.--.+...-.+.+. ....+..++.|+..||+
T Consensus 188 wMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA-MSALYHIAQNesPtLq---s~eWS~~F~~Fvd~CLq 263 (948)
T KOG0577|consen 188 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESPTLQ---SNEWSDYFRNFVDSCLQ 263 (948)
T ss_pred ccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-HHHHHHHHhcCCCCCC---CchhHHHHHHHHHHHHh
Confidence 999998853 7899999999999999999999877654311 0000111111122221 44567889999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 018381 161 YEPRERPNAKSLVAS 175 (357)
Q Consensus 161 ~~p~~Rps~~~v~~~ 175 (357)
+-|.+|||..+++.|
T Consensus 264 KipqeRptse~ll~H 278 (948)
T KOG0577|consen 264 KIPQERPTSEELLKH 278 (948)
T ss_pred hCcccCCcHHHHhhc
Confidence 999999999999887
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-28 Score=220.24 Aligned_cols=174 Identities=21% Similarity=0.254 Sum_probs=131.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||.+......
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~-ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 81 MAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG-FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred cCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 47899999996544567999999999999999999999999 999999999999999999999999987643221
Q ss_pred ------CccccCCCCCCcccccc--CCCCccccccchHHHHHHHHhCCCCCCcchhHhh--hc--Ccccccc--------
Q 018381 76 ------KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI--RG--KNFLMLM-------- 135 (357)
Q Consensus 76 ------~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~--~~--~~~~~~~-------- 135 (357)
....++..|+|||++.+ ..++.++|+|||||++|+|++|+.||........ .. .......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 12346778999999875 3578899999999999999999998864311110 00 0000000
Q ss_pred ----------------ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 ----------------DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 ----------------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
............+.++.+++.+||..+|++|||+.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0000111122345789999999999999999999999987
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=235.83 Aligned_cols=172 Identities=20% Similarity=0.244 Sum_probs=125.0
Q ss_pred CCchhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----
Q 018381 3 NETLSKHLFHWE---NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---- 75 (357)
+++|.+++.... .......++..|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 246 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g-IiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 324 (501)
T PHA03210 246 DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK-LIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAF 324 (501)
T ss_pred ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEeCCCceecCcccccc
Confidence 356666664211 223456778899999999999999999 999999999999999999999999999865432
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchh-----HhhhcCc--------c-------ccc
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL-----DLIRGKN--------F-------LML 134 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-----~~~~~~~--------~-------~~~ 134 (357)
....||+.|+|||++.+..++.++|||||||++|||++|..++..... ....... + ...
T Consensus 325 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 404 (501)
T PHA03210 325 DYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDY 404 (501)
T ss_pred cccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHH
Confidence 235689999999999998999999999999999999999865442210 0000000 0 000
Q ss_pred cccc-c---CCCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 135 MDSC-L---EGHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 135 ~~~~-~---~~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+... + ...+ ....+..+.++|.+||..||++|||+.+++.+
T Consensus 405 i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 405 IDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred hhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0000 0 0000 01234567888999999999999999999987
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=220.84 Aligned_cols=169 Identities=18% Similarity=0.144 Sum_probs=130.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~g~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (305)
T cd05609 83 VEGGDCATLLK--NIGALPVDMARMYFAETVLALEYLHNYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL 159 (305)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence 47899999994 4467999999999999999999999999 999999999999999999999999988632110
Q ss_pred --------------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCC
Q 018381 76 --------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 141 (357)
Q Consensus 76 --------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
....++..|+|||.+.+..++.++|+|||||++|+|++|..||.+.....+.......... . .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~--~-~ 236 (305)
T cd05609 160 YEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE--W-P 236 (305)
T ss_pred cccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC--C-C
Confidence 1234678899999998888999999999999999999999988754322211111110000 0 0
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 142 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 142 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
......+..+.++|.+||+.+|++||++..+.+.
T Consensus 237 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~l 270 (305)
T cd05609 237 EGDEALPADAQDLISRLLRQNPLERLGTGGAFEV 270 (305)
T ss_pred CccccCCHHHHHHHHHHhccChhhccCccCHHHH
Confidence 1112456789999999999999999985444443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-28 Score=217.42 Aligned_cols=172 Identities=18% Similarity=0.299 Sum_probs=133.2
Q ss_pred CCCCchhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--C
Q 018381 1 MPNETLSKHLFHW-ENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~ 76 (357)
+++++|.+++... ....+++..+..++.|++.||.|||+. + ++|+||||+||+++.++.+||+|||++...... .
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN-IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK 159 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC-EeeCCCCHHHEEECCCCCEEEeecCCcccccCCccc
Confidence 4789999988431 134799999999999999999999974 7 999999999999999999999999998755332 3
Q ss_pred ccccCCCCCCccccccCC------CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 77 SYSTNLAFTPPEYLRTGR------VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...++..|+|||++.+.. ++.++|+|||||++|+|++|+.||.......... ....... ......+...+.+
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~ 237 (286)
T cd06622 160 TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFA-QLSAIVD-GDPPTLPSGYSDD 237 (286)
T ss_pred cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHH-HHHHHhh-cCCCCCCcccCHH
Confidence 446788999999986543 4789999999999999999999886432211110 0011111 1112344557788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.++|.+||..+|++||++.+++.+
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 238 AQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred HHHHHHHHcccCcccCCCHHHHhcC
Confidence 9999999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-28 Score=216.13 Aligned_cols=170 Identities=20% Similarity=0.258 Sum_probs=136.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
++||+|.+++. ....+++.++..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ..
T Consensus 75 ~~~~~L~~~l~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~-~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~ 151 (262)
T cd05572 75 CLGGELWTILR--DRGLFDEYTARFYIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWT 151 (262)
T ss_pred CCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEEcCCCCEEEeeCCcccccCccccccc
Confidence 47899999995 3456999999999999999999999999 999999999999999999999999998865543 23
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
..++..|++||.+.+..++.++|+||||+++|+|++|..|+.....+... .............++...+..+.++|.+
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 229 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPME--IYNDILKGNGKLEFPNYIDKAAKDLIKQ 229 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHH--HHHHHhccCCCCCCCcccCHHHHHHHHH
Confidence 46788999999998888899999999999999999999887654311100 0111111112223444557889999999
Q ss_pred hccCCCCCCCC-----HHHHHHH
Q 018381 158 CLQYEPRERPN-----AKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rps-----~~~v~~~ 175 (357)
||..+|++||+ +.+++++
T Consensus 230 ~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 230 LLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred HccCChhhCcCCcccCHHHHhcC
Confidence 99999999999 7888775
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-28 Score=219.36 Aligned_cols=167 Identities=20% Similarity=0.205 Sum_probs=132.1
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCccccCCC
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 83 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~ 83 (357)
|+|.+++. .....+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++..........++..
T Consensus 99 g~l~~~~~-~~~~~l~~~~~~~~~~ql~~~L~~LH~~~-i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~ 176 (307)
T cd06607 99 GSASDILE-VHKKPLQEVEIAAICHGALQGLAYLHSHE-RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPY 176 (307)
T ss_pred CCHHHHHH-HcccCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCcc
Confidence 66777663 23457999999999999999999999999 99999999999999999999999999987766667788999
Q ss_pred CCCccccc---cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhcc
Q 018381 84 FTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 160 (357)
Q Consensus 84 y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 160 (357)
|+|||++. .+.++.++||||||+++|+|++|..|+........... ... .......+...+..+.++|.+||.
T Consensus 177 y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~li~~~l~ 252 (307)
T cd06607 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH-IAQ---NDSPTLSSNDWSDYFRNFVDSCLQ 252 (307)
T ss_pred ccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH-Hhc---CCCCCCCchhhCHHHHHHHHHHhc
Confidence 99999874 35678899999999999999999988764321111000 000 000011122356789999999999
Q ss_pred CCCCCCCCHHHHHHHh
Q 018381 161 YEPRERPNAKSLVASL 176 (357)
Q Consensus 161 ~~p~~Rps~~~v~~~l 176 (357)
.+|++||++.+++.+.
T Consensus 253 ~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 253 KIPQDRPSSEELLKHR 268 (307)
T ss_pred CChhhCcCHHHHhcCh
Confidence 9999999999999873
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-29 Score=223.33 Aligned_cols=170 Identities=19% Similarity=0.279 Sum_probs=128.8
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Cccc
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYS 79 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~ 79 (357)
++|.+++.. .+..+++.++..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....
T Consensus 88 ~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 165 (309)
T cd07872 88 KDLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEV 165 (309)
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECccccceecCCCcccccccc
Confidence 578887743 4556899999999999999999999999 999999999999999999999999998754322 2345
Q ss_pred cCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc--------------------cccccccc
Q 018381 80 TNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN--------------------FLMLMDSC 138 (357)
Q Consensus 80 gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~--------------------~~~~~~~~ 138 (357)
+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||............ +.....+.
T Consensus 166 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (309)
T cd07872 166 VTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPK 245 (309)
T ss_pred ccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCc
Confidence 7899999998865 45788999999999999999999888654221100000 00000000
Q ss_pred cCC----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 139 LEG----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 139 ~~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
... .....++.++.++|.+||..||.+|||+.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 246 YKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred cCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 000 0112356788999999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=215.42 Aligned_cols=170 Identities=17% Similarity=0.272 Sum_probs=131.4
Q ss_pred CCCCchhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-CCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPM--KWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~-- 75 (357)
+++++|.+++.. ....+ ++..+..++.||+.||.|||+++ |+||||||+||+++. ++.++|+|||++......
T Consensus 87 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~ 164 (268)
T cd06624 87 VPGGSLSALLRS-KWGPLKDNEQTIIFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP 164 (268)
T ss_pred CCCCCHHHHHHH-hcccCCCcHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCeEEEecchhheecccCCC
Confidence 478999999953 23455 88999999999999999999999 999999999999976 678999999998754322
Q ss_pred --CccccCCCCCCccccccCC--CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 76 --KSYSTNLAFTPPEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
....++..|+|||++.+.. ++.++|+||||+++|+|++|+.|+......... ............++...++++
T Consensus 165 ~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 241 (268)
T cd06624 165 CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA---MFKVGMFKIHPEIPESLSAEA 241 (268)
T ss_pred ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh---HhhhhhhccCCCCCcccCHHH
Confidence 2345789999999987643 678999999999999999999887542111100 000000011123455667889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 018381 152 VRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+++.+||..+|++|||+.+++.+
T Consensus 242 ~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 242 KNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred HHHHHHHcCCCchhCCCHHHHHhC
Confidence 999999999999999999999886
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=219.74 Aligned_cols=172 Identities=19% Similarity=0.214 Sum_probs=136.0
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCccccCC
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL 82 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~ 82 (357)
.|+|.+++. ....++++.++..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||++..........+++
T Consensus 108 ~g~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 185 (317)
T cd06635 108 LGSASDLLE-VHKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTP 185 (317)
T ss_pred CCCHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCc
Confidence 367777774 24567999999999999999999999999 9999999999999999999999999988776666778899
Q ss_pred CCCCccccc---cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 83 AFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 83 ~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
.|+|||++. .+.++.++|||||||++|+|++|+.||.......... ...............+..+.+++.+||
T Consensus 186 ~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~~l 261 (317)
T cd06635 186 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY----HIAQNESPTLQSNEWSDYFRNFVDSCL 261 (317)
T ss_pred cccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHH----HHHhccCCCCCCccccHHHHHHHHHHc
Confidence 999999974 3567889999999999999999998875432111100 011111111112345677999999999
Q ss_pred cCCCCCCCCHHHHHHHhCccc
Q 018381 160 QYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 160 ~~~p~~Rps~~~v~~~l~~~~ 180 (357)
+.+|.+||++.+++.++....
T Consensus 262 ~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 262 QKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred cCCcccCcCHHHHHhChhhhc
Confidence 999999999999999866544
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=248.61 Aligned_cols=164 Identities=15% Similarity=0.123 Sum_probs=122.4
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-------------------CCCeEE
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-------------------DGNPRL 63 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-------------------~~~~kl 63 (357)
+++|.++|. ...+.+++.+++.++.||++||.|||+++ |+||||||+||||+. ++.+|+
T Consensus 63 ~~~L~~~l~-~~~~~~~~~~~~~i~~qi~~al~~lH~~g-IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki 140 (793)
T PLN00181 63 DVSLRQWLD-NPDRSVDAFECFHVFRQIVEIVNAAHSQG-IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKS 140 (793)
T ss_pred CccHHHHHh-cccccccHHHHHHHHHHHHHHHHHHHhCC-eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccc
Confidence 679999994 24567999999999999999999999999 999999999999954 445677
Q ss_pred ecCCcccccCCC--------------------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchh
Q 018381 64 SCFGLMKNSRDG--------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL 123 (357)
Q Consensus 64 ~Dfg~~~~~~~~--------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~ 123 (357)
+|||+++..... ....||+.|||||++.+..++.++|||||||++|||++|..|+.....
T Consensus 141 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~ 220 (793)
T PLN00181 141 REIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR 220 (793)
T ss_pred cccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH
Confidence 777776532110 013478899999999999999999999999999999998866442211
Q ss_pred HhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 124 DLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+.... ....++ ...........++.+||..+|.+||++.+++++
T Consensus 221 -~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 221 -TMSSLR-HRVLPP-----QILLNWPKEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred -HHHHHH-HhhcCh-----hhhhcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence 110000 001111 111123456788999999999999999999987
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-28 Score=212.10 Aligned_cols=170 Identities=22% Similarity=0.262 Sum_probs=134.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+...... ..
T Consensus 79 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 156 (253)
T cd05122 79 CSGGSLKDLLKS-TNQTLTESQIAYVCKELLKGLEYLHSNG-IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT 156 (253)
T ss_pred CCCCcHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhcCC-EecCCCCHHHEEEccCCeEEEeeccccccccccccccc
Confidence 468999999853 3368999999999999999999999999 999999999999999999999999998866554 35
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
..++..|++||.+.+...+.++|+||||+++|+|++|+.|+............ ........ ..+...+..+.++|.+
T Consensus 157 ~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~i~~ 233 (253)
T cd05122 157 MVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKI-ATNGPPGL--RNPEKWSDEFKDFLKK 233 (253)
T ss_pred eecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH-HhcCCCCc--CcccccCHHHHHHHHH
Confidence 56889999999998888899999999999999999999887654111110000 00000000 1112236789999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 018381 158 CLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rps~~~v~~~ 175 (357)
||..||++|||+.+++.+
T Consensus 234 ~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 234 CLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred HccCChhhCCCHHHHhcC
Confidence 999999999999999876
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-28 Score=215.79 Aligned_cols=166 Identities=18% Similarity=0.264 Sum_probs=131.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
++|++|.+++. .+.+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~L~~~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06917 84 AEGGSVRTLMK---AGPIAEKYISVIIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRS 159 (277)
T ss_pred CCCCcHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccc
Confidence 46899999983 458999999999999999999999999 999999999999999999999999998765433 2
Q ss_pred ccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCCh-hhHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN-DDGTELVRL 154 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l 154 (357)
...|+..|+|||.+.++ .++.++|+|||||++|+|++|..||.......... ..........+. ..+.++.++
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 234 (277)
T cd06917 160 TFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM-----LIPKSKPPRLEDNGYSKLLREF 234 (277)
T ss_pred cccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh-----ccccCCCCCCCcccCCHHHHHH
Confidence 34688899999998754 46889999999999999999998876532211110 000001111122 256789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.+||..+|++||++.+++.+
T Consensus 235 i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 235 VAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred HHHHcCCCcccCcCHHHHhhC
Confidence 999999999999999999886
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=216.79 Aligned_cols=170 Identities=16% Similarity=0.227 Sum_probs=132.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++.. .+..+++.+++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 84 CDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHK-VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred cCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 478999999842 4567999999999999999999999999 999999999999999999999999987644322 2
Q ss_pred ccccCCCCCCccccc-----cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 77 SYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
...+++.|++||++. +..++.++|+||||+++|+|++|+.||......... ........+. ...+...+..+
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~ 238 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVL-LKILKSEPPT--LDQPSKWSSSF 238 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHH-HHHhcCCCCC--cCCcccCCHHH
Confidence 346889999999875 344677999999999999999999887643211100 0001100111 11233456789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 018381 152 VRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.++|.+||..+|.+||++.+++++
T Consensus 239 ~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 239 NDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHHHHHHhccChhhCcCHHHHhcC
Confidence 999999999999999999999887
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=217.15 Aligned_cols=166 Identities=19% Similarity=0.251 Sum_probs=135.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
+++|+|.+++. ..+.+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||+++..... ....
T Consensus 83 ~~~~~L~~~~~--~~~~l~~~~~~~~~~qil~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 159 (290)
T cd05580 83 VPGGELFSHLR--KSGRFPEPVARFYAAQVVLALEYLHSLD-IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLC 159 (290)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCC
Confidence 46899999995 3468999999999999999999999999 999999999999999999999999998865543 3446
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
+++.|++||.+.+...+.++|+||||+++|+|++|..||........... .... ...++...+..+.++|.+||
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~--~~~~~~~~~~~l~~li~~~l 233 (290)
T cd05580 160 GTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEK----ILEG--KVRFPSFFSPDAKDLIRNLL 233 (290)
T ss_pred CCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HhcC--CccCCccCCHHHHHHHHHHc
Confidence 88999999999888888999999999999999999988765432111111 1111 11234455788999999999
Q ss_pred cCCCCCCC-----CHHHHHHH
Q 018381 160 QYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 160 ~~~p~~Rp-----s~~~v~~~ 175 (357)
..+|.+|+ ++.+++.+
T Consensus 234 ~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 234 QVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred cCCHHHccCcccCCHHHHHcC
Confidence 99999998 78888776
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-28 Score=217.18 Aligned_cols=172 Identities=19% Similarity=0.256 Sum_probs=134.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
++||+|.+++.......+++.+++.++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 75 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 153 (277)
T cd05577 75 MNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR-IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKG 153 (277)
T ss_pred CCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccc
Confidence 46899999996544457999999999999999999999999 999999999999999999999999998754432 23
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
..++..|++||++.++.++.++|+|||||++|+|++|+.||......... ..+..... ......+...++.+.++|.+
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~li~~ 231 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK-EELKRRTL-EMAVEYPDKFSPEAKDLCEA 231 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH-HHHHhccc-cccccCCccCCHHHHHHHHH
Confidence 45778999999998888899999999999999999999887543210000 00000000 01112344557889999999
Q ss_pred hccCCCCCCC-----CHHHHHHH
Q 018381 158 CLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rp-----s~~~v~~~ 175 (357)
||+.+|.+|| ++.+++.|
T Consensus 232 ~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 232 LLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred HccCChhHccCCCcccHHHHHhC
Confidence 9999999999 66667765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=216.98 Aligned_cols=172 Identities=19% Similarity=0.297 Sum_probs=129.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++++|..++. ....+++.++..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 82 CDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHN-CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred cCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence 46777777763 3457999999999999999999999999 9999999999999999999999999988654432
Q ss_pred ccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhH-hh-h-----cCc------------cc-ccc
Q 018381 77 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALD-LI-R-----GKN------------FL-MLM 135 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~-~-----~~~------------~~-~~~ 135 (357)
...++..|+|||++.+ ..++.++|+||||+++|+|++|+.||...... .. . ... +. ...
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 3457889999999876 45788999999999999999999887643211 00 0 000 00 000
Q ss_pred ccccCCC-----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 DSCLEGH-----FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 ~~~~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+..... .-...+..+.+++.+||..+|++||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0000000 011346779999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-28 Score=217.70 Aligned_cols=171 Identities=20% Similarity=0.233 Sum_probs=127.8
Q ss_pred CchhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 4 ETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 4 gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
|+|.+++.... +..+++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ...
T Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (285)
T cd07861 83 MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR-VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHE 161 (285)
T ss_pred CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCC
Confidence 67888874322 367999999999999999999999999 999999999999999999999999998754322 223
Q ss_pred ccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhh----------------cC----cccccccc
Q 018381 79 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR----------------GK----NFLMLMDS 137 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~----------------~~----~~~~~~~~ 137 (357)
.+++.|+|||++.+. .++.++|+|||||++|+|++|+.||......... .. .+....+.
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (285)
T cd07861 162 VVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPK 241 (285)
T ss_pred cccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccc
Confidence 568899999988753 4688999999999999999999887643110000 00 00000000
Q ss_pred c---cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 C---LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 ~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
. .........++++.++|.+||..||.+|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 242 WKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred cCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0 0000112356788999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=213.95 Aligned_cols=168 Identities=20% Similarity=0.254 Sum_probs=134.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
++|++|.+++. ....+++..++.++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 84 ~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 160 (258)
T cd06632 84 VPGGSLAKLLK--KYGSFPEPVIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS 160 (258)
T ss_pred cCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccceeccccccccc
Confidence 47899999994 3457999999999999999999999999 999999999999999999999999998754432 34
Q ss_pred cccCCCCCCccccccCC-CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
..++..|++||.+.... ++.++|+|||||++|+|++|+.||......... ...........++...++.+.+++.
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~ 236 (258)
T cd06632 161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV----FKIGRSKELPPIPDHLSDEAKDFIL 236 (258)
T ss_pred cCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHH----HHHHhcccCCCcCCCcCHHHHHHHH
Confidence 56788999999987766 889999999999999999999887543211100 0101101112234456788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|++||++.+++.+
T Consensus 237 ~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 237 KCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred HHhhcCcccCcCHHHHhcC
Confidence 9999999999999999876
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-28 Score=216.13 Aligned_cols=177 Identities=20% Similarity=0.310 Sum_probs=136.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeecCCCCCeeeCCCCCeEEecCCcccccCC--CCc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--~~~ 77 (357)
+++|+|.+++. ..+.+++..+..++.+++.||.|||+. + ++|+||||+||+++.++.++|+|||++..... ...
T Consensus 85 ~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~ 161 (284)
T cd06620 85 MDCGSLDRIYK--KGGPIPVEILGKIAVAVVEGLTYLYNVHR-IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT 161 (284)
T ss_pred CCCCCHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHHhcC-eeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence 47899999884 356799999999999999999999974 6 99999999999999999999999999865432 234
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhh---hcC----ccccccccccCCCCCh-hhHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI---RGK----NFLMLMDSCLEGHFSN-DDGT 149 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~-~~~~ 149 (357)
..|+..|+|||++.+..++.++|+|||||++|+|++|..||........ ... ......... ...++. ..+.
T Consensus 162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 240 (284)
T cd06620 162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-PPRLPSSDFPE 240 (284)
T ss_pred cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-CCCCCchhcCH
Confidence 5689999999999888889999999999999999999998864322100 000 001111111 111122 2567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
.+.+++.+||..||++|||+.+++++..-++.
T Consensus 241 ~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 241 DLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 89999999999999999999999998554443
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-28 Score=212.43 Aligned_cols=168 Identities=21% Similarity=0.305 Sum_probs=131.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++++|.+++. .+..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 81 CSGGTLEELLE--HGRILDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred CCCCcHHHHHh--hcCCCChHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 46899999995 3456899999999999999999999999 9999999999999999999999999987654321
Q ss_pred ----ccccCCCCCCccccccCC---CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCCh--hh
Q 018381 77 ----SYSTNLAFTPPEYLRTGR---VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN--DD 147 (357)
Q Consensus 77 ----~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 147 (357)
...++..|++||++.+.. .+.++||||||+++|++++|+.||............... ......+. .+
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 233 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA----GHKPPIPDSLQL 233 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc----CCCCCCCccccc
Confidence 235678999999998765 788999999999999999999987543111100000000 11111222 23
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 148 GTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 148 ~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+..+.++|.+||+.+|++|||+.+++.+
T Consensus 234 ~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 234 SPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 6789999999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-28 Score=216.45 Aligned_cols=168 Identities=18% Similarity=0.245 Sum_probs=133.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++ ....+++.++..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 98 ~~~~~L~~~~---~~~~l~~~~~~~i~~~l~~al~~LH~~g-i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~ 173 (293)
T cd06647 98 LAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 173 (293)
T ss_pred CCCCcHHHHH---hhcCCCHHHHHHHHHHHHHHHHHHHhCC-EeeccCCHHHEEEcCCCCEEEccCcceecccccccccc
Confidence 4789999999 3456899999999999999999999999 999999999999999999999999987654332 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...+++.|++||++.++.++.++|+|||||++|++++|+.||.......... ............+...+..+.++|.
T Consensus 174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~ 250 (293)
T cd06647 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---LIATNGTPELQNPEKLSAIFRDFLN 250 (293)
T ss_pred cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee---ehhcCCCCCCCCccccCHHHHHHHH
Confidence 3457889999999988888999999999999999999998886532111000 0000111111122335678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|++||++.+++.|
T Consensus 251 ~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 251 RCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHccCChhhCcCHHHHhcC
Confidence 9999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-28 Score=241.64 Aligned_cols=170 Identities=21% Similarity=0.225 Sum_probs=128.9
Q ss_pred CCCCchhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC------CceeecCCCCCeeeCC---------------
Q 018381 1 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKG------RALYHDLNTYRILFDQ--------------- 57 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~------~iiH~dlkp~Nill~~--------------- 57 (357)
+++|+|.++|... ..+.+++..++.|+.||+.||.|||+.+ +||||||||+||||+.
T Consensus 96 ~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ 175 (1021)
T PTZ00266 96 CDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNL 175 (1021)
T ss_pred CCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccccccc
Confidence 4789999999532 2367999999999999999999999832 2999999999999964
Q ss_pred --CCCeEEecCCcccccCCC---CccccCCCCCCcccccc--CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc
Q 018381 58 --DGNPRLSCFGLMKNSRDG---KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN 130 (357)
Q Consensus 58 --~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~ 130 (357)
.+.+||+|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||....... .
T Consensus 176 ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~----q 251 (1021)
T PTZ00266 176 NGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFS----Q 251 (1021)
T ss_pred CCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHH----H
Confidence 234899999998865432 34578999999999864 457889999999999999999999886421100 0
Q ss_pred cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 131 FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+...+..... ......+.++.+||..||..+|.+||++.+++.+
T Consensus 252 li~~lk~~p~-lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 252 LISELKRGPD-LPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred HHHHHhcCCC-CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 0000100001 0112346789999999999999999999999864
|
|
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=213.86 Aligned_cols=170 Identities=19% Similarity=0.296 Sum_probs=135.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 76 (357)
+++++|.+++. ....+++..++.++.|+++|+.|||+ .+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lh~~~~-~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~ 157 (264)
T cd06623 81 MDGGSLADLLK--KVGKIPEPVLAYIARQILKGLDYLHTKRH-IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC 157 (264)
T ss_pred cCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHhccCC-CccCCCCHHHEEECCCCCEEEccCccceecccCCCcc
Confidence 46899999995 34789999999999999999999999 98 9999999999999999999999999988654332
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChh-hHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND-DGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l 154 (357)
...++..|+|||.+.+..++.++|+||||+++|+|++|+.|+.......... ....... ......+.. .+..+.++
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~l~~l 235 (264)
T cd06623 158 NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFE-LMQAICD-GPPPSLPAEEFSPEFRDF 235 (264)
T ss_pred cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHH-HHHHHhc-CCCCCCCcccCCHHHHHH
Confidence 3457889999999998888999999999999999999998875542100000 0001111 111122333 67889999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
|.+||..+|++||++.+++++
T Consensus 236 i~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 236 ISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHccCChhhCCCHHHHHhC
Confidence 999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-28 Score=215.69 Aligned_cols=168 Identities=19% Similarity=0.322 Sum_probs=128.7
Q ss_pred CCchhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC---
Q 018381 3 NETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 76 (357)
Q Consensus 3 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 76 (357)
+|+|.+++... .+..+++.+++.++.||+.||.|||++ + ++||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 161 (283)
T cd06617 83 DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKT 161 (283)
T ss_pred cccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 46787777431 345799999999999999999999997 7 9999999999999999999999999987654322
Q ss_pred ccccCCCCCCcccccc----CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCC-ChhhHHHH
Q 018381 77 SYSTNLAFTPPEYLRT----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF-SNDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 151 (357)
...++..|+|||++.+ ..++.++|+|||||++|+|++|+.|+....... . ......... .... ....+.++
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~--~~~~~~~~~-~~~~~~~~~~~~l 237 (283)
T cd06617 162 IDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF-Q--QLKQVVEEP-SPQLPAEKFSPEF 237 (283)
T ss_pred cccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH-H--HHHHHHhcC-CCCCCccccCHHH
Confidence 2457889999998865 345789999999999999999998875321100 0 000111110 1111 12356789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 018381 152 VRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.++|.+||..+|++||++.+++.+
T Consensus 238 ~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 238 QDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred HHHHHHHccCChhhCcCHHHHhcC
Confidence 999999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-29 Score=209.69 Aligned_cols=166 Identities=16% Similarity=0.223 Sum_probs=139.3
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
-||..|.++ ..+++|++.++..+++..++||.|||... -||||||..|||++-+|..||+|||.+....+. .+.
T Consensus 112 AGSiSDI~R-~R~K~L~E~EIs~iL~~TLKGL~YLH~~~-KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTV 189 (502)
T KOG0574|consen 112 AGSISDIMR-ARRKPLSEQEISAVLRDTLKGLQYLHDLK-KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTV 189 (502)
T ss_pred CCcHHHHHH-HhcCCccHHHHHHHHHHHHhHHHHHHHHH-HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcc
Confidence 578888884 46789999999999999999999999987 999999999999999999999999999866554 467
Q ss_pred ccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCC--CChhhHHHHHHHHH
Q 018381 79 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH--FSNDDGTELVRLAS 156 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~ 156 (357)
+||+.|||||++..-.|+.++||||||++..||..|++|+... -.....-+++....+. .|...+.++.++++
T Consensus 190 IGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDI-----HPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~ 264 (502)
T KOG0574|consen 190 IGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDI-----HPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIR 264 (502)
T ss_pred ccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccc-----cccceeEeccCCCCCCCCChHhhhhHHHHHHH
Confidence 8999999999999999999999999999999999999776542 1122222222222222 35567889999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
.||.+.|++|-|+.++++|
T Consensus 265 ~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 265 SCLIKKPEERKTALRLCEH 283 (502)
T ss_pred HHhcCCHHHHHHHHHHhhh
Confidence 9999999999999999987
|
|
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-28 Score=215.04 Aligned_cols=175 Identities=17% Similarity=0.241 Sum_probs=134.4
Q ss_pred CCCCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--C
Q 018381 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~ 76 (357)
++||+|.+++.. .....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 161 (287)
T cd06621 83 CEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK-IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG 161 (287)
T ss_pred cCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecCCeEEEeeccccccccccccc
Confidence 468999988742 23567899999999999999999999999 999999999999999999999999998754432 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhH---hhhcCc-cccccccccCCCCC--hhhHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD---LIRGKN-FLMLMDSCLEGHFS--NDDGTE 150 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~--~~~~~~ 150 (357)
...++..|++||.+.+..++.++|||||||++|+|++|+.|+...... ...... ........+..... ...++.
T Consensus 162 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (287)
T cd06621 162 TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEE 241 (287)
T ss_pred cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHH
Confidence 446788999999999888999999999999999999999887644110 000000 00000011111111 234678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
+.++|.+||..+|.+|||+.+++.+-
T Consensus 242 ~~~li~~~l~~~p~~Rpt~~eil~~~ 267 (287)
T cd06621 242 FKDFIKQCLEKDPTRRPTPWDMLEHP 267 (287)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHhCc
Confidence 99999999999999999999999973
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-28 Score=213.99 Aligned_cols=171 Identities=19% Similarity=0.287 Sum_probs=134.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-CeEEecCCcccccCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~---- 75 (357)
+++|+|.+++. ..+++++..+..++.||+.||.|||+++ ++|+||||+||+++.++ .+||+|||++......
T Consensus 85 ~~~~~L~~~l~--~~~~~~~~~~~~~~~ql~~al~~LH~~~-i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 161 (268)
T cd06630 85 MAGGSVSHLLS--KYGAFKEAVIINYTEQLLRGLSYLHENQ-IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA 161 (268)
T ss_pred cCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEcccccccccccccccC
Confidence 47899999995 4568999999999999999999999999 99999999999998776 5999999998754432
Q ss_pred ----CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 76 ----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 76 ----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
....++..|+|||.+.+..++.++|+||+|+++|+|++|..||......... ...............+...++.+
T Consensus 162 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 240 (268)
T cd06630 162 GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL-ALIFKIASATTAPSIPEHLSPGL 240 (268)
T ss_pred CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH-HHHHHHhccCCCCCCchhhCHHH
Confidence 1235788999999998888899999999999999999999887532110000 00011111112233455667889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 018381 152 VRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+++.+||..+|.+||++.+++.+
T Consensus 241 ~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 241 RDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred HHHHHHHcCCCcccCcCHHHHhcC
Confidence 999999999999999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-28 Score=214.59 Aligned_cols=170 Identities=18% Similarity=0.247 Sum_probs=133.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
++|++|.+++.. ....+++.+++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 97 ~~~~~L~~~l~~-~~~~l~~~~~~~i~~~i~~~L~~lH~~g-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 174 (286)
T cd06614 97 MDGGSLTDIITQ-NFVRMNEPQIAYVCREVLQGLEYLHSQN-VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRN 174 (286)
T ss_pred cCCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhc
Confidence 468999999953 2248999999999999999999999999 999999999999999999999999987654332 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...++..|++||.+.+..++.++|+|||||++|+|++|+.|+............ .. ........+..++..+.++|.
T Consensus 175 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~l~~li~ 251 (286)
T cd06614 175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLI-TT--KGIPPLKNPEKWSPEFKDFLN 251 (286)
T ss_pred cccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-Hh--cCCCCCcchhhCCHHHHHHHH
Confidence 345788999999998888899999999999999999999887543211110000 00 000011112235678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||+.+|.+|||+.+++.+
T Consensus 252 ~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 252 KCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred HHhccChhhCcCHHHHhhC
Confidence 9999999999999999886
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-28 Score=213.40 Aligned_cols=166 Identities=22% Similarity=0.268 Sum_probs=135.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
++|++|.+++. ...++++.++..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~l~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 158 (258)
T cd05578 82 LLGGDLRYHLS--QKVKFSEEQVKFWICEIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS 158 (258)
T ss_pred CCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEEcCCCCEEEeecccccccCCCccccc
Confidence 46899999994 3368999999999999999999999999 999999999999999999999999998765443 23
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchh---HhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL---DLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
..|+..|+|||++.+..++.++|+||||+++|+|++|..|+..... ..+.. .... .....+...+..+.++
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~ 232 (258)
T cd05578 159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRA-----KQET-ADVLYPATWSTEAIDA 232 (258)
T ss_pred cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHH-----Hhcc-ccccCcccCcHHHHHH
Confidence 4678899999999888889999999999999999999998775431 11111 1110 1223455567899999
Q ss_pred HHHhccCCCCCCCCH--HHHHHH
Q 018381 155 ASRCLQYEPRERPNA--KSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~--~~v~~~ 175 (357)
|.+||..+|.+||++ .+++.+
T Consensus 233 i~~~l~~~p~~R~~~~~~~l~~~ 255 (258)
T cd05578 233 INKLLERDPQKRLGDNLKDLKNH 255 (258)
T ss_pred HHHHccCChhHcCCccHHHHhcC
Confidence 999999999999999 776654
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-28 Score=217.60 Aligned_cols=170 Identities=18% Similarity=0.169 Sum_probs=133.8
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCccccCC
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL 82 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~ 82 (357)
.|+|.+++.. ...++++.++..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++..........+++
T Consensus 98 ~~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 175 (308)
T cd06634 98 LGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTP 175 (308)
T ss_pred CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCc
Confidence 3677777742 4567999999999999999999999999 9999999999999999999999999988776666778899
Q ss_pred CCCCccccc---cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 83 AFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 83 ~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
.|+|||.+. .+.++.++|||||||++|+|++|..|+.......... ...............+..+.++|.+||
T Consensus 176 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~cl 251 (308)
T cd06634 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY----HIAQNESPALQSGHWSEYFRNFVDSCL 251 (308)
T ss_pred cccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH----HHhhcCCCCcCcccccHHHHHHHHHHh
Confidence 999999975 3457889999999999999999998875432111110 000011111112345678999999999
Q ss_pred cCCCCCCCCHHHHHHHhCc
Q 018381 160 QYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 160 ~~~p~~Rps~~~v~~~l~~ 178 (357)
..+|++||++.+++.+...
T Consensus 252 ~~~P~~Rp~~~~ll~~~~~ 270 (308)
T cd06634 252 QKIPQDRPTSEVLLKHRFV 270 (308)
T ss_pred hCCcccCCCHHHHhhCccc
Confidence 9999999999999988443
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.1e-28 Score=214.05 Aligned_cols=166 Identities=19% Similarity=0.311 Sum_probs=134.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++ ....+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~l~~~i---~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06641 84 LGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred CCCCcHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHccCC-eecCCCCHHhEEECCCCCEEEeecccceecccchhhhc
Confidence 4689999998 4567999999999999999999999999 999999999999999999999999998754432 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...++..|++||.+.+...+.++|+|||||++|+|++|..|+......... ..+........+..++..+.+++.
T Consensus 160 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~ 234 (277)
T cd06641 160 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVL-----FLIPKNNPPTLEGNYSKPLKEFVE 234 (277)
T ss_pred cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHH-----HHHhcCCCCCCCcccCHHHHHHHH
Confidence 346788999999998888899999999999999999999887543211110 011111112233456678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|.+||++.+++.+
T Consensus 235 ~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 235 ACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHccCChhhCcCHHHHHhC
Confidence 9999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-28 Score=218.31 Aligned_cols=171 Identities=18% Similarity=0.304 Sum_probs=129.5
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
.|+|.+++.. .+..+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ...
T Consensus 87 ~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (301)
T cd07873 87 DKDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNE 164 (301)
T ss_pred ccCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCccccc
Confidence 3688888843 4567899999999999999999999999 999999999999999999999999998754322 233
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhh-----------cCccccccc---------c
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-----------GKNFLMLMD---------S 137 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~-----------~~~~~~~~~---------~ 137 (357)
.+++.|+|||++.+ ..++.++|||||||++|+|++|+.||......... ...+..... +
T Consensus 165 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (301)
T cd07873 165 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYP 244 (301)
T ss_pred ceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccC
Confidence 56889999999865 34688999999999999999999888653211100 000000000 0
Q ss_pred ccC----CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 CLE----GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 ~~~----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
... ......+++.+.++|.+||..||.+|||+.+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 245 KYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred ccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000 00122456789999999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-28 Score=219.02 Aligned_cols=174 Identities=21% Similarity=0.280 Sum_probs=129.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++.......+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++++|||.+......
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 81 MAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG-YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred ccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 46789999986444456999999999999999999999999 999999999999999999999999754322110
Q ss_pred ------CccccCCCCCCccccccC--CCCccccccchHHHHHHHHhCCCCCCcchhHhh-----hcCccc----------
Q 018381 76 ------KSYSTNLAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-----RGKNFL---------- 132 (357)
Q Consensus 76 ------~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-----~~~~~~---------- 132 (357)
....++..|++||++.+. .++.++|||||||++|+|++|+.||........ ......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCE 239 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchh
Confidence 112345679999999763 468899999999999999999988764321110 000000
Q ss_pred --------------------------cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 133 --------------------------MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 133 --------------------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...........+..++..+.++|++||..||++|||+.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0000011111223467789999999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.9e-28 Score=211.10 Aligned_cols=169 Identities=17% Similarity=0.242 Sum_probs=134.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC-eEEecCCcccccCCCC---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN-PRLSCFGLMKNSRDGK--- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~-~kl~Dfg~~~~~~~~~--- 76 (357)
+++++|.+++.+..+..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++. +||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK-ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence 46899999996544456899999999999999999999999 999999999999998864 6999999987554432
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
...|++.|+|||++.+..++.++|+||||+++|+|++|..|+.......... ...... ........+..+.++|
T Consensus 160 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~i 234 (257)
T cd08225 160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL----KICQGY-FAPISPNFSRDLRSLI 234 (257)
T ss_pred cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH----HHhccc-CCCCCCCCCHHHHHHH
Confidence 2357889999999988888999999999999999999998876432221111 111111 1122334567899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 018381 156 SRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+||..+|++|||+.+++.+
T Consensus 235 ~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 235 SQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHHhccChhhCcCHHHHhhC
Confidence 99999999999999999886
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-28 Score=215.61 Aligned_cols=171 Identities=20% Similarity=0.271 Sum_probs=129.9
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----Cc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KS 77 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~ 77 (357)
+++|.+++.. ....+++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (286)
T cd07832 82 PSDLSEVLRD-EERPLPEAQVKSYMRMLLKGVAYMHANG-IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSH 159 (286)
T ss_pred CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcccc
Confidence 7899999853 3477999999999999999999999999 999999999999999999999999998765432 23
Q ss_pred cccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC-----------------cccccccccc
Q 018381 78 YSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------------NFLMLMDSCL 139 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-----------------~~~~~~~~~~ 139 (357)
..++..|+|||++.+. .++.++|||||||++|+|++|..++........... ..........
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T cd07832 160 QVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITF 239 (286)
T ss_pred ccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccC
Confidence 4678899999998754 458899999999999999999766543311000000 0000000000
Q ss_pred C-------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 140 E-------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 140 ~-------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
. ....+..+..+.++|.+||..+|++|||+.+++.|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 240 PESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 00112345789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=212.29 Aligned_cols=172 Identities=19% Similarity=0.212 Sum_probs=131.0
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC---ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---SYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~ 79 (357)
+++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++....... ...
T Consensus 89 ~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 167 (287)
T cd07838 89 DQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR-IVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVV 167 (287)
T ss_pred ccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhEEEccCCCEEEeccCcceeccCCccccccc
Confidence 357888885433456999999999999999999999999 9999999999999999999999999987654332 335
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccc------------------ccccccC-
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM------------------LMDSCLE- 140 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~------------------~~~~~~~- 140 (357)
++..|+|||++.+..++.++|+|||||++|+|++|..||............+.. .......
T Consensus 168 ~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (287)
T cd07838 168 VTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPR 247 (287)
T ss_pred ccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhccccccc
Confidence 688899999999888899999999999999999998776543211100000000 0000000
Q ss_pred --CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 141 --GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 141 --~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....+..+..+.++|.+||..||.+||++.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 248 SFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred chhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 00112345778999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-28 Score=212.43 Aligned_cols=167 Identities=18% Similarity=0.206 Sum_probs=134.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
+++++|.+++. ..+.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++....
T Consensus 88 ~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (264)
T cd06653 88 MPGGSIKDQLK--AYGALTENVTRRYTRQILQGVSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGT 164 (264)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECccccccccccccccCc
Confidence 36899999984 3456899999999999999999999999 99999999999999999999999999875432
Q ss_pred -CCccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 75 -GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 75 -~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
.....++..|+|||++.+..++.++|+|||||++|+|++|+.||....... .+...........++...++.+.+
T Consensus 165 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~ 240 (264)
T cd06653 165 GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA----AIFKIATQPTKPMLPDGVSDACRD 240 (264)
T ss_pred cccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH----HHHHHHcCCCCCCCCcccCHHHHH
Confidence 123457889999999988888999999999999999999998876431111 111111122223356667788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
++.+||+ +|..||++.+++.|
T Consensus 241 ~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 241 FLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred HHHHHhc-CcccCccHHHHhcC
Confidence 9999999 57999999998876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-28 Score=210.52 Aligned_cols=169 Identities=21% Similarity=0.289 Sum_probs=136.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++++|.+++. ....+++.+++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 83 ~~~~~L~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (260)
T cd06606 83 VSGGSLSSLLK--KFGKLPEPVIRKYTRQILEGLAYLHSNG-IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG 159 (260)
T ss_pred cCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEcccccEEeccccccccc
Confidence 36899999995 3348999999999999999999999999 9999999999999999999999999987655432
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...++..|++||.+.+...+.++||||||+++|+|++|..||........ ..............+...+..+.++
T Consensus 160 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (260)
T cd06606 160 TGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA---ALYKIGSSGEPPEIPEHLSEEAKDF 236 (260)
T ss_pred ccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH---HHHhccccCCCcCCCcccCHHHHHH
Confidence 34678899999999888889999999999999999999988765421100 0011111112223445567899999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
|.+||..+|++||++.+++.+
T Consensus 237 i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 237 LRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred HHHhCcCChhhCCCHHHHhhC
Confidence 999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-28 Score=210.16 Aligned_cols=173 Identities=16% Similarity=0.207 Sum_probs=134.1
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC--------------------CCCe
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ--------------------DGNP 61 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~--------------------~~~~ 61 (357)
-|-|++++|...+-.+++..++..|+.|+++++.|||+.+ ++|.||||+|||+.+ +..+
T Consensus 173 lG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k-l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I 251 (415)
T KOG0671|consen 173 LGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK-LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAI 251 (415)
T ss_pred cChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc-eeecCCChheEEEeccceEEEeccCCccceeccCCCcce
Confidence 3558999997666789999999999999999999999999 999999999999831 2348
Q ss_pred EEecCCcccccCCCC-ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchh-------HhhhcCcccc
Q 018381 62 RLSCFGLMKNSRDGK-SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL-------DLIRGKNFLM 133 (357)
Q Consensus 62 kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-------~~~~~~~~~~ 133 (357)
+|+|||.++...... +.+.|..|.|||++.+-+++..+||||+||||+|+.+|...|..+.. +.+-+..-..
T Consensus 252 ~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~ 331 (415)
T KOG0671|consen 252 KVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSR 331 (415)
T ss_pred EEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHH
Confidence 999999998766544 55789999999999999999999999999999999999988876521 0000000000
Q ss_pred cccc-------------------------ccCCC--------CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 134 LMDS-------------------------CLEGH--------FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 134 ~~~~-------------------------~~~~~--------~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
++.. .+... .......++.+|+++||.+||.+|+|+.|++.|
T Consensus 332 mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 332 MIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred HhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 0000 00000 112345679999999999999999999999986
|
|
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=214.77 Aligned_cols=171 Identities=20% Similarity=0.239 Sum_probs=129.8
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
+++|.+++.. ....+++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ...
T Consensus 89 ~~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 166 (293)
T cd07843 89 EHDLKSLMET-MKQPFLQSEVKCLMLQLLSGVAHLHDNW-ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQL 166 (293)
T ss_pred CcCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccc
Confidence 3578888743 3457999999999999999999999999 999999999999999999999999998865443 234
Q ss_pred ccCCCCCCccccccCC-CCccccccchHHHHHHHHhCCCCCCcchhHhhh-------------------c------Cccc
Q 018381 79 STNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------------------G------KNFL 132 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~-------------------~------~~~~ 132 (357)
.+++.|+|||.+.+.. .+.++|+||||+++|+|++|..||......... . ....
T Consensus 167 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (293)
T cd07843 167 VVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFT 246 (293)
T ss_pred cccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccc
Confidence 5688999999987644 588999999999999999999887543111000 0 0000
Q ss_pred cccccccCCCCChh-hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 133 MLMDSCLEGHFSND-DGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 133 ~~~~~~~~~~~~~~-~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
......+...++.. .++.+.++|++||+.+|++|||+.+++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 247 KYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred cccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00011111222322 46789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=216.28 Aligned_cols=167 Identities=20% Similarity=0.202 Sum_probs=131.3
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCccccCC
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL 82 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~ 82 (357)
.|+|.+++. ....++++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++..........|+.
T Consensus 104 ~~~l~~~l~-~~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~ 181 (313)
T cd06633 104 LGSASDLLE-VHKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTP 181 (313)
T ss_pred CCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccc
Confidence 367777774 34567999999999999999999999999 9999999999999999999999999987666556677899
Q ss_pred CCCCccccc---cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 83 AFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 83 ~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
.|+|||++. .+.++.++|||||||++|+|++|..|+............ .. ...........+..+.+++.+||
T Consensus 182 ~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~l~~li~~~l 257 (313)
T cd06633 182 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-AQ---NDSPTLQSNEWTDSFRGFVDYCL 257 (313)
T ss_pred cccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-Hh---cCCCCCCccccCHHHHHHHHHHc
Confidence 999999984 356788999999999999999999887653211100000 00 00111112234567999999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 018381 160 QYEPRERPNAKSLVAS 175 (357)
Q Consensus 160 ~~~p~~Rps~~~v~~~ 175 (357)
+.+|.+||++.+++.+
T Consensus 258 ~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 258 QKIPQERPASAELLRH 273 (313)
T ss_pred cCChhhCcCHHHHhcC
Confidence 9999999999999977
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=214.37 Aligned_cols=168 Identities=20% Similarity=0.254 Sum_probs=132.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++++|.+++ ..+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 99 ~~~~~L~~~~---~~~~~~~~~~~~~~~ql~~~l~~lH~~g-ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 174 (292)
T cd06657 99 LEGGALTDIV---THTRMNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174 (292)
T ss_pred CCCCcHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEcccccceeccccccccc
Confidence 4788999988 3457899999999999999999999999 999999999999999999999999987654322 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...+++.|++||.+.+..++.++|+||||+++|+|++|..||.......... .........+. .....+..+.+++.
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~l~~li~ 251 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDNLPPKLK--NLHKVSPSLKGFLD 251 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhhCCcccC--CcccCCHHHHHHHH
Confidence 3467899999999988888999999999999999999998876432111100 00111111111 12235677999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|.+||++.+++.+
T Consensus 252 ~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 252 RLLVRDPAQRATAAELLKH 270 (292)
T ss_pred HHHhCCcccCcCHHHHhcC
Confidence 9999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.9e-28 Score=213.96 Aligned_cols=172 Identities=17% Similarity=0.287 Sum_probs=128.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++++|.++.. ....+++.+++.++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 82 VDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred CCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence 45777877763 3456999999999999999999999999 999999999999999999999999998754332 2
Q ss_pred ccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh-hhc-----Cccc--------------ccc
Q 018381 77 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRG-----KNFL--------------MLM 135 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~-----~~~~--------------~~~ 135 (357)
...++..|+|||++.+ ..++.++||||||+++|+|++|+.||....... ... ..+. ...
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 3457889999999875 446789999999999999999997775432100 000 0000 000
Q ss_pred ccccC-----CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 DSCLE-----GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 ~~~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+... ....+..+..+.+++.+||..+|++||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000 00122456789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=209.87 Aligned_cols=169 Identities=22% Similarity=0.264 Sum_probs=137.4
Q ss_pred CCCCchhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC--
Q 018381 1 MPNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 76 (357)
+++++|.+++.... +..+++.+++.++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 159 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL 159 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence 46889999995432 478999999999999999999999999 9999999999999999999999999987654432
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...+++.|+|||.+.+..++.++|+||+|+++|+|++|+.|+............ ... .....+...+..+.++
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~ 234 (258)
T cd08215 160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKI----LKG-QYPPIPSQYSSELRNL 234 (258)
T ss_pred ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHH----hcC-CCCCCCCCCCHHHHHH
Confidence 346788999999998888899999999999999999999887654322211111 111 1122344567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.+||..+|++|||+.+++.+
T Consensus 235 i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 235 VSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHHcCCChhhCcCHHHHhcC
Confidence 999999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=213.75 Aligned_cols=171 Identities=20% Similarity=0.304 Sum_probs=129.7
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC-----
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----- 76 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----- 76 (357)
+++.|..++. ....+++.+++.++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 83 ~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (288)
T cd07833 83 ERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSHN-IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLT 159 (288)
T ss_pred CCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEEeeecccccCCCcccccc
Confidence 4555655552 4466999999999999999999999999 9999999999999999999999999987654332
Q ss_pred ccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHh-h-hc------------------Cccc--c
Q 018381 77 SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-I-RG------------------KNFL--M 133 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~-~~------------------~~~~--~ 133 (357)
...++..|+|||++.+. .++.++|+||||+++|+|++|+.||....... . .. ..+. .
T Consensus 160 ~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07833 160 DYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVA 239 (288)
T ss_pred CcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccc
Confidence 34678899999999887 78899999999999999999998776431110 0 00 0000 0
Q ss_pred cccc----ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 134 LMDS----CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 134 ~~~~----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.... .....++..++.++.++|++||..+|++|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 240 FPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 0000 00011223347889999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=209.03 Aligned_cols=169 Identities=20% Similarity=0.221 Sum_probs=136.9
Q ss_pred CCCCchhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--C
Q 018381 1 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~ 76 (357)
+++++|.+++.+. .+..+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||+++..... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~-i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 159 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK-ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK 159 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEEecCCcEEEeeccchhhhccCCcc
Confidence 4688999998532 2467999999999999999999999999 999999999999999999999999998765443 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...++..|++||.+.+..++.++|+||||+++|+|++|+.|+.......+... .........+...+.++.+++.
T Consensus 160 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~ 234 (256)
T cd08530 160 TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYK-----VQRGKYPPIPPIYSQDLQNFIR 234 (256)
T ss_pred cccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-----HhcCCCCCCchhhCHHHHHHHH
Confidence 34578899999999988889999999999999999999988765432221111 1111112234456788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|++||++.+++.+
T Consensus 235 ~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 235 SMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HHcCCCcccCCCHHHHhcC
Confidence 9999999999999999876
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=219.20 Aligned_cols=168 Identities=15% Similarity=0.222 Sum_probs=128.4
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++. . .+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 104 ~~~l~~~~~---~-~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 178 (353)
T cd07850 104 DANLCQVIQ---M-DLDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 178 (353)
T ss_pred CCCHHHHHh---h-cCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCc
Confidence 356777763 1 2899999999999999999999999 999999999999999999999999999865443 2345
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHh-hhc--------------------------C---
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRG--------------------------K--- 129 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~--------------------------~--- 129 (357)
++..|+|||++.+..++.++|||||||++|+|++|+.||....... +.. .
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (353)
T cd07850 179 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKY 258 (353)
T ss_pred ccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCC
Confidence 7889999999998889999999999999999999998876431100 000 0
Q ss_pred ---cccccccccc----CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 130 ---NFLMLMDSCL----EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 130 ---~~~~~~~~~~----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+........ ....+...+..+.++|.+||..||++|||+.+++.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 259 AGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred CCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000000 000012346678999999999999999999999987
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=209.16 Aligned_cols=167 Identities=21% Similarity=0.290 Sum_probs=135.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (254)
T cd06627 81 AENGSLRQIIK--KFGPFPESLVAVYVYQVLQGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA 157 (254)
T ss_pred CCCCcHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEECCCCCEEEeccccceecCCCccccc
Confidence 46789999995 3478999999999999999999999999 9999999999999999999999999988655433
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...++..|++||...+..++.++|+||||+++|+|++|..|+......... .... .......+...+..+.+++.
T Consensus 158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~i~ 232 (254)
T cd06627 158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAAL----FRIV-QDDHPPLPEGISPELKDFLM 232 (254)
T ss_pred ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHH----HHHh-ccCCCCCCCCCCHHHHHHHH
Confidence 346788999999998877889999999999999999999887543211000 0000 11112334556788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..+|++|||+.+++.+
T Consensus 233 ~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 233 QCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHHhCChhhCcCHHHHhcC
Confidence 9999999999999999865
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=212.89 Aligned_cols=171 Identities=19% Similarity=0.252 Sum_probs=129.0
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
+++|.+++....+..+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ...
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (284)
T cd07860 82 HQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 160 (284)
T ss_pred ccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccc
Confidence 357888885445678999999999999999999999999 999999999999999999999999998754332 223
Q ss_pred ccCCCCCCccccccCC-CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc------------------------ccc
Q 018381 79 STNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN------------------------FLM 133 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~------------------------~~~ 133 (357)
.+++.|+|||++.+.. ++.++|+|||||++|+|+||+.||............ +..
T Consensus 161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd07860 161 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPK 240 (284)
T ss_pred cccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhccc
Confidence 4678999999887644 578999999999999999999887653211000000 000
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 134 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.....+. ......++.+.++|.+||..||.+|||+.+++.+
T Consensus 241 ~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 241 WARQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred ccccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0000000 0112345678999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=212.29 Aligned_cols=170 Identities=21% Similarity=0.260 Sum_probs=128.6
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++.. ....+++.+++.++.|++.||.|||+.+ ++||||||+||+++. +.+||+|||+++..... ....
T Consensus 83 ~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~~ 159 (282)
T cd07831 83 DMNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNG-IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTEYI 159 (282)
T ss_pred CccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEcC-CCeEEEecccccccccCCCcCCCC
Confidence 4688888843 3467999999999999999999999999 999999999999999 99999999998755432 2345
Q ss_pred cCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh-hh------cCcc---------ccccccccCC-
Q 018381 80 TNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IR------GKNF---------LMLMDSCLEG- 141 (357)
Q Consensus 80 gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~------~~~~---------~~~~~~~~~~- 141 (357)
++..|+|||++.+ +.++.++|+|||||++|||++|..||....... .. +... .......+..
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (282)
T cd07831 160 STRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSK 239 (282)
T ss_pred CCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCccc
Confidence 7889999997754 456889999999999999999998886432110 00 0000 0000000000
Q ss_pred ------CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 142 ------HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 142 ------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
......+..+.++|.+||..+|++||++.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 240 KGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0112456889999999999999999999999886
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=217.06 Aligned_cols=168 Identities=17% Similarity=0.271 Sum_probs=126.6
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-------C
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-------K 76 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~ 76 (357)
++|.+++ ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 92 ~~l~~~~---~~~~l~~~~~~~i~~ql~~aL~~LH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 167 (336)
T cd07849 92 TDLYKLI---KTQHLSNDHIQYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLT 167 (336)
T ss_pred cCHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcC
Confidence 4666666 4567999999999999999999999999 999999999999999999999999998754322 1
Q ss_pred ccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh-hh------c----Cccc--------ccc-
Q 018381 77 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IR------G----KNFL--------MLM- 135 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~------~----~~~~--------~~~- 135 (357)
...||..|+|||.+.+ ..++.++|||||||++|+|++|+.||....... +. . .... ...
T Consensus 168 ~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (336)
T cd07849 168 EYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIK 247 (336)
T ss_pred CcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHh
Confidence 2467889999998754 467889999999999999999998875431100 00 0 0000 000
Q ss_pred --ccccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 --DSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 --~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+...... ..+..++.+.++|.+||..+|.+|||+.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 248 SLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000 011245679999999999999999999999998
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=213.75 Aligned_cols=171 Identities=18% Similarity=0.177 Sum_probs=128.6
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----cc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~ 78 (357)
+|+|.+++.. ....+++..++.++.||++||.|||+++ ++|+||||+||+++.++.++|+|||+++...... ..
T Consensus 85 ~~~L~~~i~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (298)
T cd07841 85 ETDLEKVIKD-KSIVLTPADIKSYMLMTLRGLEYLHSNW-ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQ 162 (298)
T ss_pred CCCHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCChhhEEEcCCCCEEEccceeeeeccCCCcccccc
Confidence 7899999953 2247999999999999999999999999 9999999999999999999999999987654332 23
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh-hhc----------------CccccccccccC
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRG----------------KNFLMLMDSCLE 140 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~----------------~~~~~~~~~~~~ 140 (357)
.+++.|+|||.+.+ ..++.++|+|||||++|+|++|..+|....... ... ............
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (298)
T cd07841 163 VVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPF 242 (298)
T ss_pred ccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccccccc
Confidence 45788999998865 456889999999999999999976554321100 000 000000000000
Q ss_pred C-----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 141 G-----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 141 ~-----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
. ......+..+.++|.+||..+|++|||+.+++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 243 PPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred CCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0 0112346789999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=209.46 Aligned_cols=165 Identities=23% Similarity=0.298 Sum_probs=130.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++. ..+.+++..++.++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 75 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 151 (265)
T cd05579 75 LPGGDLASLLE--NVGSLDEDVARIYIAEIVLALEYLHSNG-IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL 151 (265)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc
Confidence 46889999995 3348999999999999999999999999 999999999999999999999999998754332
Q ss_pred -------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChh--
Q 018381 76 -------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND-- 146 (357)
Q Consensus 76 -------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 146 (357)
....++..|++||.+.+...+.++|+||||+++|+|++|..||........... ...... ..+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~----~~~~~~--~~~~~~~ 225 (265)
T cd05579 152 NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQN----ILNGKI--EWPEDVE 225 (265)
T ss_pred ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HhcCCc--CCCcccc
Confidence 123567899999999888888999999999999999999988765432221111 000011 11222
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 018381 147 DGTELVRLASRCLQYEPRERPNAKSLVA 174 (357)
Q Consensus 147 ~~~~~~~li~~cl~~~p~~Rps~~~v~~ 174 (357)
.+..+.+++.+||+.+|.+|||+..+.+
T Consensus 226 ~~~~~~~~i~~~l~~~p~~Rpt~~~~~~ 253 (265)
T cd05579 226 VSDEAIDLISKLLVPDPEKRLGAKSIEE 253 (265)
T ss_pred CCHHHHHHHHHHhcCCHhhcCCCccHHH
Confidence 3688999999999999999999944433
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-29 Score=205.27 Aligned_cols=168 Identities=18% Similarity=0.250 Sum_probs=128.9
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---CccccCCC
Q 018381 7 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYSTNLA 83 (357)
Q Consensus 7 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~ 83 (357)
+.+++..++..+++..+-+|..-.++||.||-..-.|||||+||+|||++..|.+||||||.+.....+ +.-.|...
T Consensus 153 Yk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrp 232 (361)
T KOG1006|consen 153 YKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRP 232 (361)
T ss_pred HHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCcc
Confidence 444445567889999999999999999999988766999999999999999999999999998755443 23468899
Q ss_pred CCCcccccc--CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccC--CCCChhhHHHHHHHHHHhc
Q 018381 84 FTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE--GHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 84 y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl 159 (357)
|||||.+.. ..|+.+|||||||+++||+.||..|+..+.. .+..-......++.+. ..-..+.+..+..+|..||
T Consensus 233 YmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-vfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl 311 (361)
T KOG1006|consen 233 YMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-VFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCL 311 (361)
T ss_pred ccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-HHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHh
Confidence 999999865 3478899999999999999999988765422 1111111111122111 1112235678999999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 018381 160 QYEPRERPNAKSLVAS 175 (357)
Q Consensus 160 ~~~p~~Rps~~~v~~~ 175 (357)
.+|-+.||...+++++
T Consensus 312 ~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 312 IKDRSDRPKYDDLKKF 327 (361)
T ss_pred hcccccCcchhhhhcC
Confidence 9999999999999875
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-27 Score=216.87 Aligned_cols=170 Identities=18% Similarity=0.276 Sum_probs=130.4
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
+++|.+++. ..+.+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ...
T Consensus 92 ~~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 168 (337)
T cd07858 92 DTDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEY 168 (337)
T ss_pred CCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcCccccccCCCccccccc
Confidence 467888884 4567999999999999999999999999 999999999999999999999999998865433 234
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh----------------h---hcCccccc---c
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL----------------I---RGKNFLML---M 135 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~----------------~---~~~~~~~~---~ 135 (357)
.++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||....... . ........ .
T Consensus 169 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (337)
T cd07858 169 VVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSL 248 (337)
T ss_pred ccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhc
Confidence 67889999998865 457889999999999999999998875431100 0 00000000 0
Q ss_pred ccccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 DSCLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 ~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...... .....+++.+.++|++||..+|.+|||+.+++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 249 PYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred CcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 000000 0122456789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=212.12 Aligned_cols=169 Identities=20% Similarity=0.297 Sum_probs=126.0
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Cccc
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYS 79 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~ 79 (357)
|+|.+++.+ ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 87 ~~L~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (291)
T cd07844 87 TDLKQYMDD-CGGGLSMHNVRLFLFQLLRGLAYCHQRR-VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEV 164 (291)
T ss_pred CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCHHHEEEcCCCCEEECccccccccCCCCccccccc
Confidence 588888853 3458999999999999999999999999 999999999999999999999999998754321 2234
Q ss_pred cCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchh--Hhhh-------c---Cc---------ccccc--
Q 018381 80 TNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL--DLIR-------G---KN---------FLMLM-- 135 (357)
Q Consensus 80 gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~--~~~~-------~---~~---------~~~~~-- 135 (357)
++..|+|||++.+ ..++.++||||||+++|+|++|+.||..... +... . .. .....
T Consensus 165 ~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (291)
T cd07844 165 VTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFP 244 (291)
T ss_pred cccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccccc
Confidence 6788999999875 4578899999999999999999988754320 0000 0 00 00000
Q ss_pred ---ccccCCCCChhhH--HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 ---DSCLEGHFSNDDG--TELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 ---~~~~~~~~~~~~~--~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
........ .... ..+.+++.+||..+|++|||+.+++.+
T Consensus 245 ~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 245 FYPPRPLINHA-PRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred ccCChhHHHhC-cCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00000000 0122 678899999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-27 Score=216.15 Aligned_cols=169 Identities=20% Similarity=0.286 Sum_probs=130.7
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC-------
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------- 76 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------- 76 (357)
++|.+++. .+..+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 88 ~~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~g-i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~ 164 (330)
T cd07834 88 TDLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSAN-VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLT 164 (330)
T ss_pred hhHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccCceEeeccccccccccc
Confidence 47888884 4458999999999999999999999999 9999999999999999999999999988654332
Q ss_pred ccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhc-------------------Cccccccc
Q 018381 77 SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------------------KNFLMLMD 136 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-------------------~~~~~~~~ 136 (357)
...++..|+|||++.+. .++.++|+||||+++|+|++|+.||.......... ......+.
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (330)
T cd07834 165 EYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLK 244 (330)
T ss_pred ccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHh
Confidence 34578899999999887 78899999999999999999998886542111000 00000000
Q ss_pred c---ccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 137 S---CLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 137 ~---~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
. ... .......+..+.++|.+||..+|++||++.+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 245 SLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred hcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 000 00112356789999999999999999999999986
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=212.50 Aligned_cols=171 Identities=18% Similarity=0.243 Sum_probs=127.2
Q ss_pred CchhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-CCCeEEecCCcccccCCC----
Q 018381 4 ETLSKHLFHWE---NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG---- 75 (357)
Q Consensus 4 gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~---- 75 (357)
|+|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+||+++. ++.+||+|||+++.....
T Consensus 90 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~ 168 (295)
T cd07837 90 SDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG-VMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSY 168 (295)
T ss_pred cCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEecCCCeEEEeecccceecCCCcccc
Confidence 57888875322 356899999999999999999999999 999999999999998 889999999998754322
Q ss_pred CccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh-h----hc---C---cc---ccccc----
Q 018381 76 KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-I----RG---K---NF---LMLMD---- 136 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~----~~---~---~~---~~~~~---- 136 (357)
....+++.|+|||++.+ ..++.++|+||||+++|+|++|..||....... . .. . .+ .....
T Consensus 169 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (295)
T cd07837 169 THEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEF 248 (295)
T ss_pred CCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhc
Confidence 22356789999998865 456889999999999999999998876531110 0 00 0 00 00000
Q ss_pred cccC----CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 137 SCLE----GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 137 ~~~~----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+... ....+..+..+.++|.+||..+|.+||++.+++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 249 PQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 00112356789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.2e-28 Score=204.48 Aligned_cols=165 Identities=20% Similarity=0.282 Sum_probs=137.4
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC----CCCc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DGKS 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~~ 77 (357)
-||.|+-+|. ..+.+++.....+-.+|+.||.|||+++ ||.||||.+|.|++.+|++||+|||+++..- ..++
T Consensus 251 nGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~-ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kT 327 (516)
T KOG0690|consen 251 NGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRN-IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKT 327 (516)
T ss_pred cCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCC-eeeeechhhhheeccCCceEeeecccchhcccccceecc
Confidence 4788888884 4678999999999999999999999999 9999999999999999999999999998432 3467
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
++|||.|+|||++....|+.+.|-|.+||++|||++|+.||.....+.+-.-. .-. ...+|...+++...|+.-
T Consensus 328 FCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI----l~e--d~kFPr~ls~eAktLLsG 401 (516)
T KOG0690|consen 328 FCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI----LME--DLKFPRTLSPEAKTLLSG 401 (516)
T ss_pred ccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH----Hhh--hccCCccCCHHHHHHHHH
Confidence 89999999999999999999999999999999999999999865332221110 111 123677778899999999
Q ss_pred hccCCCCCCC-----CHHHHHHH
Q 018381 158 CLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rp-----s~~~v~~~ 175 (357)
.|.+||.+|. .+.+|.++
T Consensus 402 LL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 402 LLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred HhhcChHhhcCCCchhHHHHHhh
Confidence 9999999994 46666654
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-27 Score=212.20 Aligned_cols=173 Identities=21% Similarity=0.282 Sum_probs=132.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++. ....+++..+..++.|+++||.|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 87 ~~~~~L~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~-~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 163 (288)
T cd05583 87 VNGGELFTHLY--QREHFTESEVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERA 163 (288)
T ss_pred CCCCcHHHHHh--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEEECcccccccccccccc
Confidence 46899999985 3467999999999999999999999999 9999999999999999999999999987543322
Q ss_pred -ccccCCCCCCccccccCC--CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...|+..|++||.+.+.. .+.++|+||||+++|+|++|..|+................... ....+...+..+.+
T Consensus 164 ~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~ 241 (288)
T cd05583 164 YSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--KPPFPKTMSAEARD 241 (288)
T ss_pred ccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--CCCCCcccCHHHHH
Confidence 235788999999987654 6789999999999999999998875321100000000001111 11234445678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
++.+||+.+|++|||+.++...|..
T Consensus 242 li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 242 FIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred HHHHHhcCCHhhccCcchHHHHhcC
Confidence 9999999999999998777665443
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-27 Score=215.81 Aligned_cols=170 Identities=18% Similarity=0.302 Sum_probs=129.5
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------- 75 (357)
+|+|.+++. .++.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 91 ~~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 167 (334)
T cd07855 91 ESDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYF 167 (334)
T ss_pred hhhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcc
Confidence 467888884 4566999999999999999999999999 999999999999999999999999998754321
Q ss_pred -CccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh-------h------------hcCccccc
Q 018381 76 -KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-------I------------RGKNFLML 134 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-------~------------~~~~~~~~ 134 (357)
....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||....... . ........
T Consensus 168 ~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 247 (334)
T cd07855 168 MTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKY 247 (334)
T ss_pred cccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHH
Confidence 13467889999999865 457889999999999999999998886431100 0 00000000
Q ss_pred cccc-cCCC-----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 135 MDSC-LEGH-----FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 135 ~~~~-~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.... .... .....+..+.++|.+||+.+|++||++.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 248 IQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred HhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0000 0000 112356789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-27 Score=211.69 Aligned_cols=169 Identities=21% Similarity=0.310 Sum_probs=126.9
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC---cc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---SY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~ 78 (357)
+++|.+++.. ....+++.++..++.||+.||.|||+. + ++||||+|+||+++.++.+||+|||++....... ..
T Consensus 97 ~~~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~ 174 (296)
T cd06618 97 STCLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHG-VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRS 174 (296)
T ss_pred CcCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCC
Confidence 3455555532 345899999999999999999999984 7 9999999999999999999999999987554322 23
Q ss_pred ccCCCCCCccccccCC----CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccc-cCCCCChhhHHHHHH
Q 018381 79 STNLAFTPPEYLRTGR----VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC-LEGHFSNDDGTELVR 153 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 153 (357)
.++..|+|||++.+.. ++.++|+||||+++|+|++|+.||.....+. .. ........ ...+....++..+.+
T Consensus 175 ~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~l~~ 251 (296)
T cd06618 175 AGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF-EV--LTKILQEEPPSLPPNEGFSPDFCS 251 (296)
T ss_pred CCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH-HH--HHHHhcCCCCCCCCCCCCCHHHHH
Confidence 4678999999987543 7889999999999999999999876421110 00 00001000 001111235678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 018381 154 LASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l 176 (357)
++.+||..+|++||++.+++.+.
T Consensus 252 li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 252 FVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred HHHHHccCChhhCCCHHHHhcCh
Confidence 99999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=229.21 Aligned_cols=155 Identities=19% Similarity=0.273 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-CCCeEEecCCcccccCCC-----CccccCCCCCCccccccC
Q 018381 20 WAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG-----KSYSTNLAFTPPEYLRTG 93 (357)
Q Consensus 20 ~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~~~~~ 93 (357)
...+..++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++..... ....+|+.|+|||.+...
T Consensus 254 ~~~i~~i~~qll~aL~yLH~~g-IiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~ 332 (566)
T PLN03225 254 NKIIQTIMRQILFALDGLHSTG-IVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMS 332 (566)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC-EEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhcc
Confidence 3456689999999999999999 999999999999985 678999999999754322 345789999999965432
Q ss_pred ----------------------CCCccccccchHHHHHHHHhCCCCCCcchhHh---hhcCc-----cccccccccCCC-
Q 018381 94 ----------------------RVIPESVVYSFGTLLLDLLSGKHIPPSHALDL---IRGKN-----FLMLMDSCLEGH- 142 (357)
Q Consensus 94 ----------------------~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~- 142 (357)
.++.++|||||||++|||+++..++....... +.... +...........
T Consensus 333 ~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 412 (566)
T PLN03225 333 TQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDL 412 (566)
T ss_pred CCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhh
Confidence 23345699999999999999875543321111 11100 001111110000
Q ss_pred -----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 143 -----FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 143 -----~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..........+||.+||+.||++|||+.++++|
T Consensus 413 ~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 413 RRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred hhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCC
Confidence 000112345689999999999999999999998
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-27 Score=210.52 Aligned_cols=172 Identities=19% Similarity=0.253 Sum_probs=128.9
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
+++|.+++.......+++.+++.++.|+++||.|||+.+ ++|+||+|+||+++.++.++|+|||+++..... ...
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~-~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 159 (283)
T cd07835 81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR-VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHE 159 (283)
T ss_pred CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCcc
Confidence 468888885433357999999999999999999999999 999999999999999999999999998754322 223
Q ss_pred ccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHh-----hhcC---------------cccccccc
Q 018381 79 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-----IRGK---------------NFLMLMDS 137 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-----~~~~---------------~~~~~~~~ 137 (357)
.++..|+|||++.+. .++.++|+||||+++|+|++|+.||....... .+.. .+......
T Consensus 160 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd07835 160 VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK 239 (283)
T ss_pred ccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccc
Confidence 457899999988764 46889999999999999999998875432110 0000 00000000
Q ss_pred ---ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 ---CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 ---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..........+..+.++|.+||..+|.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 240 WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00001123345789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=216.20 Aligned_cols=170 Identities=17% Similarity=0.246 Sum_probs=128.8
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------- 75 (357)
+++|.+++. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 165 (332)
T cd07857 89 EADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSAN-VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGF 165 (332)
T ss_pred cCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHeEEcCCCCEEeCcCCCceeccccccccccc
Confidence 568888884 4568999999999999999999999999 999999999999999999999999998754321
Q ss_pred -CccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhh-------------------cCc---c
Q 018381 76 -KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------------------GKN---F 131 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~-------------------~~~---~ 131 (357)
....||..|+|||++.+ ..++.++|+|||||++|+|++|+.||......... ... .
T Consensus 166 ~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
T cd07857 166 MTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNY 245 (332)
T ss_pred ccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHH
Confidence 22467899999998765 46788999999999999999999877543110000 000 0
Q ss_pred ccccccccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 132 LMLMDSCLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 132 ~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.......... ......+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 246 IRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000 0112245789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-27 Score=207.85 Aligned_cols=172 Identities=15% Similarity=0.258 Sum_probs=130.6
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++....+..+++.+++.++.|++.+|.|||+++ ++|+||+|+||+++.++.++|+|||++...... ....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 159 (283)
T cd07830 81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG-FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYV 159 (283)
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCC
Confidence 789999886444468999999999999999999999999 999999999999999999999999998765443 2346
Q ss_pred cCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh-hh---------------c-CccccccccccC-
Q 018381 80 TNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IR---------------G-KNFLMLMDSCLE- 140 (357)
Q Consensus 80 gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~---------------~-~~~~~~~~~~~~- 140 (357)
++..|+|||++.+ ..++.++|+||||+++++|++|+.||+...... .. . ............
T Consensus 160 ~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd07830 160 STRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQ 239 (283)
T ss_pred CcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccc
Confidence 7889999998854 456889999999999999999998875432110 00 0 000000000000
Q ss_pred ------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 141 ------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 141 ------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.......+..+.++|.+||+.+|++|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 240 FAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00011225779999999999999999999999876
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-27 Score=204.31 Aligned_cols=165 Identities=26% Similarity=0.308 Sum_probs=133.9
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Cc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~ 77 (357)
++++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 76 ~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lh~~~-~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 152 (250)
T cd05123 76 PGGELFSHLS--KEGRFSEERARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT 152 (250)
T ss_pred CCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccC
Confidence 6899999994 3457999999999999999999999999 999999999999999999999999998765432 24
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
..++..|++||...+...+.++|+||||+++|+|++|..||.......... .... ....++...+..+.+++.+
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~----~~~~--~~~~~~~~~~~~l~~~i~~ 226 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYE----KILK--DPLRFPEFLSPEARDLISG 226 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHH----HHhc--CCCCCCCCCCHHHHHHHHH
Confidence 467889999999988888899999999999999999998876442211111 1111 1123444557889999999
Q ss_pred hccCCCCCCCCH---HHHHHH
Q 018381 158 CLQYEPRERPNA---KSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rps~---~~v~~~ 175 (357)
||..||++||++ .+++.+
T Consensus 227 ~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 227 LLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred HhcCCHhhCCCcccHHHHHhC
Confidence 999999999999 666654
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-27 Score=210.17 Aligned_cols=171 Identities=17% Similarity=0.201 Sum_probs=125.9
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
+++|.+++.. ....+++.++..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+++..... ...
T Consensus 86 ~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 163 (291)
T cd07870 86 HTDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSE 163 (291)
T ss_pred cCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCc
Confidence 3677777643 3456889999999999999999999999 999999999999999999999999998753321 233
Q ss_pred ccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhH--hhhc----------------Ccccccccccc
Q 018381 79 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALD--LIRG----------------KNFLMLMDSCL 139 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~--~~~~----------------~~~~~~~~~~~ 139 (357)
.+++.|+|||++.+. .++.++|||||||++|+|++|..||...... .+.. ...........
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (291)
T cd07870 164 VVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWF 243 (291)
T ss_pred cccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhc
Confidence 568899999998753 4788999999999999999999887543211 0000 00000000000
Q ss_pred CCCC---------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 140 EGHF---------SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 140 ~~~~---------~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.... ....+..+.+++.+|+..||.+|||+.+++.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 244 LPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred cccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000 00124678999999999999999999999876
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-27 Score=209.97 Aligned_cols=171 Identities=20% Similarity=0.300 Sum_probs=130.3
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----cc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~ 78 (357)
.++|.+++.. ....+++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||.+....... ..
T Consensus 81 ~~~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~ 158 (283)
T cd05118 81 DTDLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSHG-ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHY 158 (283)
T ss_pred CCCHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHCC-eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCc
Confidence 3578887743 3468999999999999999999999999 9999999999999999999999999987654432 34
Q ss_pred ccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhh-hc----------Cccccccc------ccc-
Q 018381 79 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-RG----------KNFLMLMD------SCL- 139 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-~~----------~~~~~~~~------~~~- 139 (357)
.++..|++||.+.+. ..+.++|+||||+++|+|++|+.||........ .. ........ ..+
T Consensus 159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05118 159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP 238 (283)
T ss_pred cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhc
Confidence 577889999998876 678899999999999999999988754321100 00 00000000 000
Q ss_pred ---C---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 140 ---E---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 140 ---~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
. .......+..+.++|.+||..||.+||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 239 KKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred cccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 01122456789999999999999999999999876
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-27 Score=211.18 Aligned_cols=170 Identities=20% Similarity=0.272 Sum_probs=131.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++. ....+++.++..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (290)
T cd05613 87 INGGELFTHLS--QRERFKEQEVQIYSGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERA 163 (290)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEECCCCCEEEeeCccceeccccccccc
Confidence 57899999995 4567999999999999999999999999 999999999999999999999999998765432
Q ss_pred CccccCCCCCCccccccC--CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
....|+..|++||.+.+. ..+.++||||||+++|+|++|..|+......... ..+...... ...+++...+..+.+
T Consensus 164 ~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~ 241 (290)
T cd05613 164 YSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ-AEISRRILK-SEPPYPQEMSALAKD 241 (290)
T ss_pred ccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccH-HHHHHHhhc-cCCCCCccCCHHHHH
Confidence 134578999999998753 4678999999999999999999887532110000 000000000 112234456778999
Q ss_pred HHHHhccCCCCCCC-----CHHHHHHH
Q 018381 154 LASRCLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rp-----s~~~v~~~ 175 (357)
++.+||..+|++|| ++.+++.+
T Consensus 242 ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 242 IIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 99999999999997 77777775
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-27 Score=213.66 Aligned_cols=168 Identities=20% Similarity=0.264 Sum_probs=126.9
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC-------
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------- 76 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------- 76 (357)
++|.+++. .+.+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+++......
T Consensus 93 ~~L~~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~-i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 168 (337)
T cd07852 93 TDLHAVIR---ANILEDVHKRYIMYQLLKALKYIHSGN-VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPV 168 (337)
T ss_pred cCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcc
Confidence 57888873 338899999999999999999999999 9999999999999999999999999987543221
Q ss_pred --ccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhc-------------------C---cc
Q 018381 77 --SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------------------K---NF 131 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-------------------~---~~ 131 (357)
...||..|+|||.+.+ ..++.++|+||||+++|+|++|+.||.......... . .+
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (337)
T cd07852 169 LTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATM 248 (337)
T ss_pred hhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHh
Confidence 2457889999998865 456889999999999999999998875431110000 0 00
Q ss_pred ccccccc---cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 132 LMLMDSC---LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 132 ~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....... .........+..+.++|.+||+.+|++|||+.+++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 249 LDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000 0001112256789999999999999999999999986
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.5e-27 Score=211.19 Aligned_cols=173 Identities=19% Similarity=0.214 Sum_probs=128.6
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
+++|.+++.. ....+++.++..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ...
T Consensus 91 ~~~l~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~ 168 (309)
T cd07845 91 EQDLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPK 168 (309)
T ss_pred CCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcc
Confidence 3577777742 3467999999999999999999999999 999999999999999999999999998865432 122
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhc-------Ccccccc------c---c-ccC
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------KNFLMLM------D---S-CLE 140 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-------~~~~~~~------~---~-~~~ 140 (357)
.+++.|+|||++.+ ..++.++|+|||||++|+|++|+.||.......... ....... . . ...
T Consensus 169 ~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (309)
T cd07845 169 VVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLP 248 (309)
T ss_pred cccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccccccccc
Confidence 45778999999875 457889999999999999999998876432111000 0000000 0 0 000
Q ss_pred C-CC------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 141 G-HF------SNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 141 ~-~~------~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
. .. ....++.+.++|.+||..||++|||+.+++.|-.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~ 292 (309)
T cd07845 249 KQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSY 292 (309)
T ss_pred CCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 0 00 0123667899999999999999999999998743
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-27 Score=208.59 Aligned_cols=166 Identities=23% Similarity=0.309 Sum_probs=134.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++. ..+.+++.+++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~l~--~~~~l~~~~~~~i~~ql~~~l~~Lh~~~-~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~ 160 (280)
T cd05581 84 APNGELLQYIR--KYGSLDEKCTRFYAAEILLALEYLHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES 160 (280)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence 36899999995 3458999999999999999999999999 9999999999999999999999999987543321
Q ss_pred --------------------ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccc
Q 018381 77 --------------------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 136 (357)
Q Consensus 77 --------------------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (357)
...++..|++||++.+..++.++|+||||++++++++|..|+........ +....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~- 235 (280)
T cd05581 161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT----FQKIL- 235 (280)
T ss_pred CCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH----HHHHH-
Confidence 23467889999999888889999999999999999999988765421111 11111
Q ss_pred cccCCCCChhhHHHHHHHHHHhccCCCCCCCCH----HHHHHH
Q 018381 137 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNA----KSLVAS 175 (357)
Q Consensus 137 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~----~~v~~~ 175 (357)
.....++...++.+.++|.+||..+|++||++ .+++.|
T Consensus 236 -~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 236 -KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred -hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 11123445567889999999999999999999 888776
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-27 Score=218.11 Aligned_cols=168 Identities=20% Similarity=0.277 Sum_probs=142.2
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Ccc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSY 78 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~ 78 (357)
.+|.+++|+. ..+.+.+..+..++.|+++|++|||+++ |||||||.+||||+.+..+||+|||++.++..+ .++
T Consensus 138 ~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~-ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~ 214 (596)
T KOG0586|consen 138 SGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKN-IVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTF 214 (596)
T ss_pred cCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcc-eeccccchhhcccccccceeeeccccceeeccccccccc
Confidence 4799999995 5667777999999999999999999999 999999999999999999999999999877654 578
Q ss_pred ccCCCCCCccccccCCC-CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 79 STNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
+|++.|.|||++.+.++ ++.+|+||+|+++|.|++|..||.+......+...+. ..++ ++...+.++.++|++
T Consensus 215 cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~----gk~r--Ip~~ms~dce~lLrk 288 (596)
T KOG0586|consen 215 CGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR----GKYR--IPFYMSCDCEDLLRK 288 (596)
T ss_pred CCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee----eeec--ccceeechhHHHHHH
Confidence 99999999999999776 6799999999999999999999887654444333222 2222 234456789999999
Q ss_pred hccCCCCCCCCHHHHHHHhCc
Q 018381 158 CLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 158 cl~~~p~~Rps~~~v~~~l~~ 178 (357)
+|..+|.+|++++++..+-+.
T Consensus 289 ~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 289 FLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred hhccCccccCCHHHhhhhccc
Confidence 999999999999999998543
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-27 Score=229.28 Aligned_cols=164 Identities=21% Similarity=0.284 Sum_probs=121.5
Q ss_pred CCchhhhhccCCCCCC-CHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC--------
Q 018381 3 NETLSKHLFHWENQPM-KWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR-------- 73 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l-~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~-------- 73 (357)
.-+|.+++. .+... .....++++++|++||.|+|++| +|||||||.||++++++.|||+|||++....
T Consensus 680 ~~ll~~iI~--~N~~~~~~d~~wrLFreIlEGLaYIH~~g-iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~ 756 (1351)
T KOG1035|consen 680 KTLLRDIIR--RNHFNSQRDEAWRLFREILEGLAYIHDQG-IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQ 756 (1351)
T ss_pred hhHHHHHHH--hcccchhhHHHHHHHHHHHHHHHHHHhCc-eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhh
Confidence 345666663 22222 57789999999999999999999 9999999999999999999999999997511
Q ss_pred --------------CCCccccCCCCCCccccccC---CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccc
Q 018381 74 --------------DGKSYSTNLAFTPPEYLRTG---RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 136 (357)
Q Consensus 74 --------------~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (357)
+.++.+||.-|+|||++.+. +|+.|+|||||||+++||+. ||......... +..+..
T Consensus 757 ~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~i---L~~LR~ 830 (1351)
T KOG1035|consen 757 DLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASI---LTNLRK 830 (1351)
T ss_pred ccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHH---HHhccc
Confidence 11245789999999999874 48999999999999999985 44443211111 111112
Q ss_pred cccCC--CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 137 SCLEG--HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 137 ~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..++. .+..+..+.-..+|+++++.||++|||+.+++..
T Consensus 831 g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 831 GSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred CCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence 22221 1233344556799999999999999999999874
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=239.33 Aligned_cols=175 Identities=23% Similarity=0.414 Sum_probs=136.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh---cCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS---SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 77 (357)
|+||+|.+++. .++|.++.+++.||++||.||| +.+ |+||||||+||+++.++.+++. ||..........
T Consensus 765 ~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~ 837 (968)
T PLN00113 765 IEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPA-VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTK 837 (968)
T ss_pred CCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCC-eecCCCCHHhEEECCCCceEEE-eccccccccCCC
Confidence 58999999993 3899999999999999999999 556 9999999999999999888876 776654444445
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchh------Hh----hhcCccccccccccCC--CCCh
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL------DL----IRGKNFLMLMDSCLEG--HFSN 145 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~------~~----~~~~~~~~~~~~~~~~--~~~~ 145 (357)
..+|+.|+|||++.+..++.++|||||||++|||++|+.|+..... .. ..........++.... ..+.
T Consensus 838 ~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (968)
T PLN00113 838 CFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQ 917 (968)
T ss_pred ccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccH
Confidence 5788999999999998999999999999999999999998743210 00 0011111222332222 2234
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
....++.+++.+||+.+|++||||.++++.|+.+...
T Consensus 918 ~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 918 NEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred HHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 4566788999999999999999999999999877553
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-27 Score=207.19 Aligned_cols=179 Identities=17% Similarity=0.218 Sum_probs=136.1
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CCceeecCCCCCeeeCCCCCeEEecCCcccccC
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK--------GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 73 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 73 (357)
|+|||.+|| ....++|....+|+..+++||+|||+. .+|+|||||+.||||.+|++.-|+|||+|..+.
T Consensus 291 ~kGsL~dyL---~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~ 367 (534)
T KOG3653|consen 291 PKGSLCDYL---KANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLE 367 (534)
T ss_pred cCCcHHHHH---HhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEec
Confidence 689999999 678999999999999999999999973 139999999999999999999999999998665
Q ss_pred CCC------ccccCCCCCCccccccCC------CCccccccchHHHHHHHHhCCCCCCcc-----------------hhH
Q 018381 74 DGK------SYSTNLAFTPPEYLRTGR------VIPESVVYSFGTLLLDLLSGKHIPPSH-----------------ALD 124 (357)
Q Consensus 74 ~~~------~~~gt~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~~g~~~~~~~-----------------~~~ 124 (357)
.+. ..+||..|||||++.+.- ...+.||||+|.++|||++........ ..+
T Consensus 368 p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e 447 (534)
T KOG3653|consen 368 PGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLE 447 (534)
T ss_pred CCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHH
Confidence 432 357999999999998622 124789999999999999876533210 122
Q ss_pred hhhcCccccccccccCCCC-ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 125 LIRGKNFLMLMDSCLEGHF-SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
.++.-.+.+-.++.++..+ ...-..-+.+.+..||..|++.|.|+.-+.+.+..+....
T Consensus 448 ~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 448 EMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred HHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 2222222222233322221 1234567999999999999999999999988877765543
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=205.50 Aligned_cols=171 Identities=23% Similarity=0.284 Sum_probs=129.4
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----cc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~ 78 (357)
+++|.+++.. ....+++.+++.++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~~l~~~i~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (282)
T cd07829 81 DMDLKKYLDK-RPGPLSPNLIKSIMYQLLRGLAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158 (282)
T ss_pred CcCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence 4689999942 2257999999999999999999999999 9999999999999999999999999987654332 23
Q ss_pred ccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhh-------------------cCc-ccccccc
Q 018381 79 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------------------GKN-FLMLMDS 137 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~-------------------~~~-~~~~~~~ 137 (357)
.++..|+|||++.+. .++.++|||||||++|||++|..||......... ... .......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (282)
T cd07829 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK 238 (282)
T ss_pred ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence 457789999998776 7788999999999999999998777543211000 000 0000000
Q ss_pred ccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 CLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 ~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.... ...+..+..+.++|.+||..+|++||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 239 FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0000 0011236789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-27 Score=214.18 Aligned_cols=170 Identities=16% Similarity=0.237 Sum_probs=129.4
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Ccccc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYST 80 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~g 80 (357)
.+++|.+++ ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....+
T Consensus 104 ~~~~L~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~ 179 (345)
T cd07877 104 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 179 (345)
T ss_pred cccCHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEcCCCCEEEeccccccccccccccccc
Confidence 367888777 3457999999999999999999999999 999999999999999999999999998865443 23567
Q ss_pred CCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh-hhc------C---cc------------cccccc
Q 018381 81 NLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRG------K---NF------------LMLMDS 137 (357)
Q Consensus 81 t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~------~---~~------------~~~~~~ 137 (357)
+..|+|||.+.+ ..++.++|||||||++|+|++|+.||....... ... . .. ....+.
T Consensus 180 ~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (345)
T cd07877 180 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 259 (345)
T ss_pred CCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcc
Confidence 899999999866 467889999999999999999998875431110 000 0 00 000000
Q ss_pred ccCCCC---ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 CLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 ~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.....+ ....++.+.++|.+||..||.+||++.+++.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 260 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred cCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000000 11245678999999999999999999999987
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=209.19 Aligned_cols=171 Identities=20% Similarity=0.235 Sum_probs=125.0
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------ 76 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------ 76 (357)
+++|.+++. .....+++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 102 ~~~l~~~l~-~~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 179 (310)
T cd07865 102 EHDLAGLLS-NKNVKFTLSEIKKVMKMLLNGLYYIHRNK-ILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNR 179 (310)
T ss_pred CcCHHHHHH-hcccCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCC
Confidence 356777773 23457999999999999999999999999 9999999999999999999999999987543221
Q ss_pred --ccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhh-------hcCccc---------ccccc
Q 018381 77 --SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-------RGKNFL---------MLMDS 137 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-------~~~~~~---------~~~~~ 137 (357)
...++..|+|||++.+. .++.++|+||||+++|+|++|..|+........ .+.... .....
T Consensus 180 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (310)
T cd07865 180 YTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKK 259 (310)
T ss_pred ccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhh
Confidence 23467889999988764 368899999999999999999987754321100 000000 00000
Q ss_pred -ccCCC----C-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 -CLEGH----F-----SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 -~~~~~----~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..... . +......+.++|.+||..||.+|||+.+++.|
T Consensus 260 ~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 260 MELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred ccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 00000 0 01123567899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=204.13 Aligned_cols=168 Identities=14% Similarity=0.211 Sum_probs=133.6
Q ss_pred CCCCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---
Q 018381 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 75 (357)
+++++|.+++.. ..+..+++.+++.++.|++.||.|||+.+ ++|+||||+||+++. +.+||+|||+++.....
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~ 161 (260)
T cd08222 84 CEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR-ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDL 161 (260)
T ss_pred CCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCChhheEeec-CCEeecccCceeecCCCccc
Confidence 478899988853 24567999999999999999999999999 999999999999984 67999999998755332
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....+++.|++||.+.+..++.++|+||||+++|+|++|..|+.......... .... ......+...+.++.++
T Consensus 162 ~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~l 236 (260)
T cd08222 162 ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVL----RIVE-GPTPSLPETYSRQLNSI 236 (260)
T ss_pred ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH----HHHc-CCCCCCcchhcHHHHHH
Confidence 23457889999999988888899999999999999999998876432111111 1111 11112344567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
|.+||..+|++||++.+++.+
T Consensus 237 i~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 237 MQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred HHHHhcCChhhCcCHHHHhhC
Confidence 999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.2e-27 Score=207.63 Aligned_cols=170 Identities=25% Similarity=0.304 Sum_probs=127.8
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC-----cc
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 78 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~ 78 (357)
++|.+++.. ....+++.+++.++.||+.||.|||+.+ ++|+||||+||++++++.+||+|||++....... ..
T Consensus 84 ~~l~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~-~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 161 (287)
T cd07840 84 HDLTGLLDS-PEVKFTESQIKCYMKQLLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNR 161 (287)
T ss_pred ccHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEEcCCCCEEEccccceeeccCCCccccccc
Confidence 578888842 3368999999999999999999999999 9999999999999999999999999987654432 23
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC-----------cc---ccc-----c---
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------NF---LML-----M--- 135 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-----------~~---~~~-----~--- 135 (357)
.++..|+|||.+.+ ..++.++||||||+++|+|++|+.||........... .+ ..+ .
T Consensus 162 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (287)
T cd07840 162 VITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPK 241 (287)
T ss_pred ccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhcccc
Confidence 45788999998765 4578899999999999999999988764321110000 00 000 0
Q ss_pred ---ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 ---DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 ---~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...+...+...++..+.+++.+||..+|.+||++.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 242 KPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000001111136789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-27 Score=199.64 Aligned_cols=160 Identities=17% Similarity=0.255 Sum_probs=121.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC----CCeEEecCCcccccCCC-------CccccCCC
Q 018381 15 NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD----GNPRLSCFGLMKNSRDG-------KSYSTNLA 83 (357)
Q Consensus 15 ~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~~~~~~~~-------~~~~gt~~ 83 (357)
.+.++...+..|++||++|+.|||++. |+||||||.||||..+ |.|||+|||+++.+... ...+.|++
T Consensus 126 ~~~lp~~mvKsilwQil~Gv~YLH~NW-vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiW 204 (438)
T KOG0666|consen 126 AKQLPRSMVKSILWQILDGVHYLHSNW-VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIW 204 (438)
T ss_pred hccCCHHHHHHHHHHHHhhhHHHhhhh-eeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEE
Confidence 467999999999999999999999999 9999999999999877 89999999999976543 23456899
Q ss_pred CCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcc-----------------------cccccc--
Q 018381 84 FTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-----------------------LMLMDS-- 137 (357)
Q Consensus 84 y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~-----------------------~~~~~~-- 137 (357)
|.|||.+.| ..|+++.|||++||++.||+|-++.|.+...+.-....+ .++.+.
T Consensus 205 YRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~ 284 (438)
T KOG0666|consen 205 YRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQT 284 (438)
T ss_pred ecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHH
Confidence 999999988 568999999999999999999987776542111111000 000000
Q ss_pred ---ccC-CCCCh-----------hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 ---CLE-GHFSN-----------DDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 ---~~~-~~~~~-----------~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.++ ..+.. .-++...+|+.++|++||-+|.|+.+.+++
T Consensus 285 ~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 285 LLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 000 00000 013347899999999999999999999998
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=210.28 Aligned_cols=172 Identities=16% Similarity=0.230 Sum_probs=126.2
Q ss_pred CCchhhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC----CCCeEEecCCcccccCCC
Q 018381 3 NETLSKHLFH---WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ----DGNPRLSCFGLMKNSRDG 75 (357)
Q Consensus 3 ~gsL~~~l~~---~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~----~~~~kl~Dfg~~~~~~~~ 75 (357)
+++|.+++.. .....+++..++.++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||+++.....
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~ 165 (316)
T cd07842 87 EHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAP 165 (316)
T ss_pred CcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEEcCCCCccceEEECCCccccccCCC
Confidence 3466666532 12247899999999999999999999999 999999999999999 899999999998754322
Q ss_pred -------CccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHh----------h-----------
Q 018381 76 -------KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDL----------I----------- 126 (357)
Q Consensus 76 -------~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~----------~----------- 126 (357)
....+++.|+|||++.+. .++.++|||||||++|+|++|..||.....+. +
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 245 (316)
T cd07842 166 LKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPT 245 (316)
T ss_pred cccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCc
Confidence 234568899999988764 57889999999999999999998876432111 0
Q ss_pred --------hcCccccccccccCCCCC---------h--hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 127 --------RGKNFLMLMDSCLEGHFS---------N--DDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 127 --------~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....+...........++ . ..+..+.+++.+||+.||++|||+.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 246 EKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred hhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000000000000001111 0 334578999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-27 Score=214.38 Aligned_cols=169 Identities=18% Similarity=0.268 Sum_probs=129.9
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-CccccC
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt 81 (357)
+++|.+++ ....+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ....++
T Consensus 103 ~~~L~~~~---~~~~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~ 178 (343)
T cd07851 103 GADLNNIV---KCQKLSDDHIQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVAT 178 (343)
T ss_pred CCCHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEccccccccccccccCCccc
Confidence 67898888 3467999999999999999999999999 999999999999999999999999998865433 345678
Q ss_pred CCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh-hhc------Cc------------cc---cccccc
Q 018381 82 LAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRG------KN------------FL---MLMDSC 138 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~------~~------------~~---~~~~~~ 138 (357)
..|+|||.+.+ ..++.++|||||||++|+|++|+.||....... ... .. .. ......
T Consensus 179 ~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (343)
T cd07851 179 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQM 258 (343)
T ss_pred ccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhcccc
Confidence 89999999865 357889999999999999999998876432110 000 00 00 000000
Q ss_pred cCCCC---ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 139 LEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 139 ~~~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....+ ....+..+.++|.+||..+|++|||+.+++.+
T Consensus 259 ~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 259 PKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred CCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00000 11236789999999999999999999999987
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=208.27 Aligned_cols=172 Identities=17% Similarity=0.189 Sum_probs=126.4
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-CCCeEEecCCcccccCCC----Cc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG----KS 77 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~----~~ 77 (357)
+++|.+++.......+++..+..++.||+.||.|||+++ ++|+||+|+||+++. ++.+||+|||++...... ..
T Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (294)
T PLN00009 84 DLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTH 162 (294)
T ss_pred cccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCcceEEEECCCCEEEEcccccccccCCCcccccc
Confidence 357777775444455789999999999999999999999 999999999999985 557999999998754322 23
Q ss_pred cccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhH-hhhc------Ccccccc------------cc
Q 018381 78 YSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALD-LIRG------KNFLMLM------------DS 137 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~~~------~~~~~~~------------~~ 137 (357)
..+++.|+|||++.+. .++.++|+|||||++|+|++|..||...... .... ....... .+
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (294)
T PLN00009 163 EVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFP 242 (294)
T ss_pred CceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcc
Confidence 3568899999998764 5688999999999999999999887643111 0000 0000000 00
Q ss_pred ccCC----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 CLEG----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 ~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.... ...+..++.+.+++.+||..+|++||++.+++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 243 KWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred cCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 0122356779999999999999999999999985
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.6e-27 Score=212.44 Aligned_cols=177 Identities=20% Similarity=0.206 Sum_probs=136.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 77 (357)
|+||+|.+|+....-..+.-...++|+.||++||+||.+.+ +|||||.+.|||++.++++||+|||+++..-.+..
T Consensus 617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n-fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN-FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc-hhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 68999999996432233455667789999999999999999 99999999999999999999999999995443332
Q ss_pred ---cccCCCCCCccccccCCCCccccccchHHHHHHHHh--CCCCCCcchhHhhhcCcccccccc---ccCCCCChhhHH
Q 018381 78 ---YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS--GKHIPPSHALDLIRGKNFLMLMDS---CLEGHFSNDDGT 149 (357)
Q Consensus 78 ---~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~--g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 149 (357)
.+-.+.|||+|.+..++++.+||||+||+++||+++ ...|+.....+..-. +...+.+. ..-...|.-|+.
T Consensus 696 qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vve-n~~~~~~~~~~~~~l~~P~~cp~ 774 (807)
T KOG1094|consen 696 QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVE-NAGEFFRDQGRQVVLSRPPACPQ 774 (807)
T ss_pred ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHH-hhhhhcCCCCcceeccCCCcCcH
Confidence 234689999999999999999999999999999965 445655432222211 11111111 111223566888
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
.+.++|.+||..+..+|||++++..+|...
T Consensus 775 ~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 775 GLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 999999999999999999999999988653
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.7e-27 Score=213.32 Aligned_cols=164 Identities=16% Similarity=0.246 Sum_probs=124.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-CccccCCCCCCcccccc-C
Q 018381 16 QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRT-G 93 (357)
Q Consensus 16 ~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE~~~~-~ 93 (357)
..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....++..|+|||++.+ .
T Consensus 112 ~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 190 (342)
T cd07879 112 HPLSEDKVQYLVYQMLCGLKYIHSAG-IIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWM 190 (342)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCcc
Confidence 46899999999999999999999999 999999999999999999999999998765433 23467889999999876 4
Q ss_pred CCCccccccchHHHHHHHHhCCCCCCcchhHh-hhc------------------Cccc---cccccccCCCC---ChhhH
Q 018381 94 RVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRG------------------KNFL---MLMDSCLEGHF---SNDDG 148 (357)
Q Consensus 94 ~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~------------------~~~~---~~~~~~~~~~~---~~~~~ 148 (357)
.++.++|||||||++|||++|+.||....... +.. .... ........... .+..+
T Consensus 191 ~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (342)
T cd07879 191 HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKAS 270 (342)
T ss_pred ccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCC
Confidence 57889999999999999999999886532110 000 0000 00000000000 11345
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH--hCccc
Q 018381 149 TELVRLASRCLQYEPRERPNAKSLVAS--LTPLQ 180 (357)
Q Consensus 149 ~~~~~li~~cl~~~p~~Rps~~~v~~~--l~~~~ 180 (357)
..+.++|.+||+.||.+||++.+++.| ++...
T Consensus 271 ~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 271 PQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 678999999999999999999999976 44443
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.9e-27 Score=208.81 Aligned_cols=168 Identities=18% Similarity=0.226 Sum_probs=138.5
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Ccc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSY 78 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~ 78 (357)
-||.|-..|+ .++.|+..+...++.-+++|++|||+++ ||.|||||+|++++.+|.+||.|||+++....+ .++
T Consensus 503 lGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~-iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTF 579 (732)
T KOG0614|consen 503 LGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKG-IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTF 579 (732)
T ss_pred cCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcC-ceeccCChhheeeccCCceEEeehhhHHHhccCCceeee
Confidence 4777777774 6789999999999999999999999999 999999999999999999999999999977654 478
Q ss_pred ccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 79 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
+||+.|.|||.+.+...+.+.|.||||+++|||++|.+||.+. .++.....+.+-++ .-.+|..++....++|++.
T Consensus 580 cGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~-dpmktYn~ILkGid---~i~~Pr~I~k~a~~Lik~L 655 (732)
T KOG0614|consen 580 CGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV-DPMKTYNLILKGID---KIEFPRRITKTATDLIKKL 655 (732)
T ss_pred cCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC-chHHHHHHHHhhhh---hhhcccccchhHHHHHHHH
Confidence 9999999999999888899999999999999999999888753 11111111111111 1245667778899999999
Q ss_pred ccCCCCCCCC-----HHHHHHHh
Q 018381 159 LQYEPRERPN-----AKSLVASL 176 (357)
Q Consensus 159 l~~~p~~Rps-----~~~v~~~l 176 (357)
+..+|.+|.- +.+|.+|-
T Consensus 656 Cr~~P~ERLG~~~~gI~DIkkH~ 678 (732)
T KOG0614|consen 656 CRDNPTERLGYQKGGINDIKKHR 678 (732)
T ss_pred HhcCcHhhhccccCChHHHHhhh
Confidence 9999999964 77887774
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-27 Score=226.51 Aligned_cols=175 Identities=18% Similarity=0.274 Sum_probs=141.1
Q ss_pred CCCCchhhhhccCC------C--------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE------N--------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~------~--------~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
+.+|+|.+|+++.. . ..++....+.++.||+.|++||+++. +|||||-.+|||+..+..+||+||
T Consensus 384 ~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~-~vHRDLAaRNVLi~~~~~~kIaDF 462 (609)
T KOG0200|consen 384 AEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP-CVHRDLAARNVLITKNKVIKIADF 462 (609)
T ss_pred ccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC-ccchhhhhhhEEecCCCEEEEccc
Confidence 46899999996432 0 24999999999999999999999998 999999999999999999999999
Q ss_pred CcccccCCCCcc-----cc--CCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDGKSY-----ST--NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~~~-----~g--t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++.......+ .+ ...|||||.+....++.++|||||||++||+++...++..... ....+.+.+....
T Consensus 463 Glar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~---~~~~l~~~l~~G~ 539 (609)
T KOG0200|consen 463 GLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP---PTEELLEFLKEGN 539 (609)
T ss_pred cceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC---cHHHHHHHHhcCC
Confidence 999965443322 22 2349999999999999999999999999999986654433210 0111223445555
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
+...|..|++++.++++.||..+|++||++.++.+.|...
T Consensus 540 r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 540 RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 6667888999999999999999999999999999988874
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=224.08 Aligned_cols=168 Identities=20% Similarity=0.215 Sum_probs=137.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
||||+|-.++.+ .. ++|+.-+..++..|+-||.-+|+.| +|||||||+|||||..|++||+|||.+-.....
T Consensus 157 ~pGGDlltLlSk-~~-~~pE~~ArFY~aEiVlAldslH~mg-yVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s 233 (1317)
T KOG0612|consen 157 MPGGDLLTLLSK-FD-RLPEDWARFYTAEIVLALDSLHSMG-YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRS 233 (1317)
T ss_pred ccCchHHHHHhh-cC-CChHHHHHHHHHHHHHHHHHHHhcc-ceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEe
Confidence 799999999953 33 8999999999999999999999999 999999999999999999999999998755533
Q ss_pred CccccCCCCCCcccccc-----CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCC--hhhH
Q 018381 76 KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS--NDDG 148 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 148 (357)
.+.+|||-|++||+++. +.|++.+|-||+||++|||+.|..||+.+..-..-+ ++++..-...|| ..++
T Consensus 234 ~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~----KIm~hk~~l~FP~~~~VS 309 (1317)
T KOG0612|consen 234 SVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYG----KIMNHKESLSFPDETDVS 309 (1317)
T ss_pred ccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHH----HHhchhhhcCCCcccccC
Confidence 24589999999999864 568899999999999999999999998653322222 222222222334 4578
Q ss_pred HHHHHHHHHhccCCCCCCCC---HHHHHHHh
Q 018381 149 TELVRLASRCLQYEPRERPN---AKSLVASL 176 (357)
Q Consensus 149 ~~~~~li~~cl~~~p~~Rps---~~~v~~~l 176 (357)
++..+||.+.+. +|+.|.. +.++..|.
T Consensus 310 eeakdLI~~ll~-~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 310 EEAKDLIEALLC-DREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred HHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence 999999999884 8888987 99998873
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=208.01 Aligned_cols=170 Identities=18% Similarity=0.208 Sum_probs=124.2
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC-------
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------- 76 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------- 76 (357)
++|.+++.. ....+++.++..++.|+++||.|||+++ ++|+||||+||+++.++.+||+|||+++......
T Consensus 99 ~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 176 (311)
T cd07866 99 HDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENH-ILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGG 176 (311)
T ss_pred cCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCC
Confidence 456666632 3567999999999999999999999999 9999999999999999999999999987543211
Q ss_pred --------ccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC-----------------c
Q 018381 77 --------SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------------N 130 (357)
Q Consensus 77 --------~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-----------------~ 130 (357)
...+++.|+|||++.+. .++.++|||||||++|+|++|+.||........... .
T Consensus 177 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T cd07866 177 GGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRS 256 (311)
T ss_pred cccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhh
Confidence 12457889999988653 578899999999999999999988754321100000 0
Q ss_pred cccccccccCCCCC-------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 131 FLMLMDSCLEGHFS-------NDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 131 ~~~~~~~~~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.............+ ....+.+.++|.+||..+|.+|||+.+++.+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 257 LPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred cccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 00000000000001 1223678899999999999999999999876
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-26 Score=193.75 Aligned_cols=172 Identities=23% Similarity=0.245 Sum_probs=130.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC---eEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~~~~~~~~-- 75 (357)
|.||+|..+|. +...|++.++-++.++|+.||.|||.+| |.||||||+|||-..... +|||||.+.......
T Consensus 158 m~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kg-IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~ 234 (463)
T KOG0607|consen 158 MRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKG-IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNND 234 (463)
T ss_pred ccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcC-cccccCCccceeecCCCCcCceeeeccccccccccCCC
Confidence 67999999995 6789999999999999999999999999 999999999999865443 799999875422211
Q ss_pred ---------CccccCCCCCCcccccc-----CCCCccccccchHHHHHHHHhCCCCCCcc-----hhHhhhcCc--cccc
Q 018381 76 ---------KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSH-----ALDLIRGKN--FLML 134 (357)
Q Consensus 76 ---------~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~-----~~~~~~~~~--~~~~ 134 (357)
.+.+|+..|||||+..- ..|+.++|+|||||++|-|++|..||.+. .|+.-+... ...+
T Consensus 235 ~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~L 314 (463)
T KOG0607|consen 235 CSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKL 314 (463)
T ss_pred CCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHH
Confidence 13467788999997632 45788999999999999999999998764 111100000 0011
Q ss_pred cccccCC--CCCh----hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 135 MDSCLEG--HFSN----DDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 135 ~~~~~~~--~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
......+ +||. .++.+..++|...|..|+.+|.++.+++.|
T Consensus 315 FesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 315 FESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred HHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 1111111 2333 467889999999999999999999999885
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-26 Score=208.75 Aligned_cols=169 Identities=20% Similarity=0.332 Sum_probs=129.2
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-CccccC
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt 81 (357)
+++|.+++ ....+++..+..++.|+++||.|||+.+ ++|+||+|+||+++.++.+||+|||+++..... ....++
T Consensus 93 ~~~L~~~~---~~~~~~~~~~~~~~~ql~~aL~~LH~~~-iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 168 (328)
T cd07856 93 GTDLHRLL---TSRPLEKQFIQYFLYQILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVST 168 (328)
T ss_pred ccCHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCccc
Confidence 56888887 4567899999999999999999999999 999999999999999999999999998755432 345678
Q ss_pred CCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh-h--------------hc----Ccccccccc-ccC
Q 018381 82 LAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-I--------------RG----KNFLMLMDS-CLE 140 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~--------------~~----~~~~~~~~~-~~~ 140 (357)
..|+|||++.+ ..++.++|+|||||++|+|++|+.||....... . .. ....+.... ...
T Consensus 169 ~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (328)
T cd07856 169 RYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKR 248 (328)
T ss_pred ccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhcccc
Confidence 89999998866 567899999999999999999998876432100 0 00 000000000 000
Q ss_pred CCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 141 GHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 141 ~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
... .+..+..+.++|.+||+.+|++||++.+++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 249 EPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred CCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 011 12346789999999999999999999999887
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-26 Score=210.94 Aligned_cols=168 Identities=17% Similarity=0.219 Sum_probs=124.1
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-CCCeEEecCCcccccCCC-------
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG------- 75 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~------- 75 (357)
++|.+++ ..+.+++..++.++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||+++.....
T Consensus 100 ~~L~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 175 (342)
T cd07854 100 TDLANVL---EQGPLSEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYL 175 (342)
T ss_pred ccHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCceEEECCcccceecCCcccccccc
Confidence 5777777 3457999999999999999999999999 999999999999974 567899999998754321
Q ss_pred CccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhh-h----cC---------ccc----cccc
Q 018381 76 KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-R----GK---------NFL----MLMD 136 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-~----~~---------~~~----~~~~ 136 (357)
....++..|+|||++.+ ..++.++|+|||||++|+|++|+.||........ . .. ... ....
T Consensus 176 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (342)
T cd07854 176 SEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVR 255 (342)
T ss_pred ccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhh
Confidence 12356889999998754 4578899999999999999999998864311000 0 00 000 0000
Q ss_pred -cccCC-----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 137 -SCLEG-----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 137 -~~~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..... ......+.++.++|.+||..||.+|||+.+++.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 256 NDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00000 0112345678999999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-26 Score=205.12 Aligned_cols=171 Identities=16% Similarity=0.228 Sum_probs=127.7
Q ss_pred CchhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 4 ETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 4 gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
|+|.+++.... ...+++.++..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||+++..... ...
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (284)
T cd07836 82 KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR-VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNE 160 (284)
T ss_pred ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccc
Confidence 57888885322 357999999999999999999999999 999999999999999999999999998754322 234
Q ss_pred ccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC-----------------ccccccccccC
Q 018381 79 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------------NFLMLMDSCLE 140 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~ 140 (357)
.++..|++||++.+. .++.++|+|||||++|+|++|+.||........... ...........
T Consensus 161 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd07836 161 VVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPR 240 (284)
T ss_pred cccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccC
Confidence 568899999998663 468899999999999999999988764321110000 00000000000
Q ss_pred ------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 141 ------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 141 ------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....+..+..+.+++.+||+.+|.+||++.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 241 YPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred CChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00112346778999999999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-26 Score=210.58 Aligned_cols=169 Identities=15% Similarity=0.222 Sum_probs=129.2
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-CccccC
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt 81 (357)
+++|.+++ ....+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++...... ....++
T Consensus 103 ~~~l~~~~---~~~~l~~~~~~~i~~qi~~al~~LH~~g-i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 178 (343)
T cd07880 103 GTDLGKLM---KHEKLSEDRIQFLVYQMLKGLKYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVT 178 (343)
T ss_pred CCCHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccccccccCccccccC
Confidence 56777777 3467999999999999999999999999 999999999999999999999999998865443 234678
Q ss_pred CCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhh-----hc--------------Cccc---cccccc
Q 018381 82 LAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-----RG--------------KNFL---MLMDSC 138 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-----~~--------------~~~~---~~~~~~ 138 (357)
+.|++||++.+ ..++.++|+|||||++|+|++|..||........ .. .... ..+...
T Consensus 179 ~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (343)
T cd07880 179 RWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRF 258 (343)
T ss_pred CcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhcccc
Confidence 99999999876 4578899999999999999999988764321100 00 0000 000000
Q ss_pred cC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 139 LE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 139 ~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.. ......++..+.++|.+||..||++|||+.+++.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 259 RKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred CcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00112456679999999999999999999999976
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.1e-26 Score=207.69 Aligned_cols=170 Identities=19% Similarity=0.200 Sum_probs=128.5
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------- 75 (357)
.|+|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++.....
T Consensus 103 ~~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~-i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 179 (335)
T PTZ00024 103 ASDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWY-FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLS 179 (335)
T ss_pred ccCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHeEECCCCCEEECCccceeeccccccccccc
Confidence 468888884 4567999999999999999999999999 999999999999999999999999998754410
Q ss_pred -----------CccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhc-------Cc----cc
Q 018381 76 -----------KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------KN----FL 132 (357)
Q Consensus 76 -----------~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-------~~----~~ 132 (357)
....+++.|+|||++.+. .++.++|+|||||++|+|++|+.||.......... .. +.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 259 (335)
T PTZ00024 180 KDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWP 259 (335)
T ss_pred ccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCc
Confidence 122457889999998764 46889999999999999999998876442111000 00 00
Q ss_pred c------------ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 133 M------------LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 133 ~------------~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
. ....... ......+..+.++|.+||..+|++|||+.+++.+-
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 260 QAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred chhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 0 0000000 01123467799999999999999999999999873
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=198.78 Aligned_cols=171 Identities=20% Similarity=0.286 Sum_probs=134.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCeeeCC---CCCeEEecCCcccccCCCC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~ 76 (357)
|+|.+|.-||. +.+.+++.++..|+.||+.||.||.... ||||-||||.|||+-+ -|.+||.|||+++......
T Consensus 550 ceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddS 627 (775)
T KOG1151|consen 550 CEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDS 627 (775)
T ss_pred cCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCc
Confidence 57889998884 7789999999999999999999998854 6999999999999853 3679999999998665432
Q ss_pred -----------ccccCCCCCCccccccC----CCCccccccchHHHHHHHHhCCCCCCcc--hhHhhhcCcccccccccc
Q 018381 77 -----------SYSTNLAFTPPEYLRTG----RVIPESVVYSFGTLLLDLLSGKHIPPSH--ALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 77 -----------~~~gt~~y~aPE~~~~~----~~~~~~Dv~slG~~l~el~~g~~~~~~~--~~~~~~~~~~~~~~~~~~ 139 (357)
...||.||++||++.-+ +.+.+.||||+||++|..+.|+.||... ..+.++...+.+..+-.+
T Consensus 628 y~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqF 707 (775)
T KOG1151|consen 628 YNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQF 707 (775)
T ss_pred cCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccC
Confidence 24689999999988643 4688999999999999999999998754 222333333333222222
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
. .-+-++.+...+|++||++.-++|....++..+
T Consensus 708 P--~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 708 P--PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred C--CCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 2 223467889999999999999999988877654
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-26 Score=203.49 Aligned_cols=169 Identities=23% Similarity=0.260 Sum_probs=125.7
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC-----cc
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 78 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~ 78 (357)
|+|.+++.. ....+++.+++.++.||+.||.|||+.+ |+|+||||+||++++++.+||+|||++....... ..
T Consensus 100 ~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 177 (302)
T cd07864 100 HDLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNK 177 (302)
T ss_pred ccHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccc
Confidence 466666632 3457999999999999999999999999 9999999999999999999999999987654322 22
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh-h------hcCc----cccccc----------
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-I------RGKN----FLMLMD---------- 136 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~------~~~~----~~~~~~---------- 136 (357)
.++..|++||++.+ ...+.++|||||||++|+|++|+.||....... . .... +.....
T Consensus 178 ~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T cd07864 178 VITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPK 257 (302)
T ss_pred eeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccc
Confidence 45778999998865 346889999999999999999998775431100 0 0000 000000
Q ss_pred ----cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 137 ----SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 137 ----~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.... ......+..+.+++.+||..+|.+|||+.+++.+
T Consensus 258 ~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 258 KQYRRRLR-EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred cccccchh-hhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 0111346789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=195.23 Aligned_cols=167 Identities=23% Similarity=0.274 Sum_probs=132.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
+++|+|.+++.. ...+++.+++.++.+++.++.|||+.+ ++|+||+|+||+++.++.++|+|||.+...... ..
T Consensus 69 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~ 145 (244)
T smart00220 69 CDGGDLFDLLKK--RGRLSEDEARFYARQILSALEYLHSNG-IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTT 145 (244)
T ss_pred CCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCcCHHHeEECCCCcEEEccccceeeecccccccc
Confidence 356799999842 333999999999999999999999999 999999999999999999999999998866553 34
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCc-chhHhhhcCccccccccccCCCCChh--hHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS-HALDLIRGKNFLMLMDSCLEGHFSND--DGTELVRL 154 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 154 (357)
..++..|++||.+.+..++.++|+||||+++++|++|..|+.. ....... .............. .+..+.++
T Consensus 146 ~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 220 (244)
T smart00220 146 FVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELF-----KKIGKPKPPFPPPEWKISPEAKDL 220 (244)
T ss_pred ccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH-----HHHhccCCCCccccccCCHHHHHH
Confidence 5678899999999888889999999999999999999988755 2111111 11111111011111 56789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.+||..+|++||++.+++++
T Consensus 221 i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 221 IRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HHHHccCCchhccCHHHHhhC
Confidence 999999999999999999874
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.3e-26 Score=185.73 Aligned_cols=170 Identities=18% Similarity=0.249 Sum_probs=126.3
Q ss_pred chhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC--------
Q 018381 5 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-------- 76 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------- 76 (357)
+|.-.|. .....++..++.+++.++++||.|+|... |+|||+||.|+||+.+|.+||+|||+++.+....
T Consensus 109 DLaGlLs-n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k-ilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kpryt 186 (376)
T KOG0669|consen 109 DLAGLLS-NRKVRFSLSEIKKVMKGLMNGLYYIHRNK-ILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYT 186 (376)
T ss_pred hHHHHhc-CccccccHHHHHHHHHHHHHHHHHHHHhh-HHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcc
Confidence 3444552 23467999999999999999999999998 9999999999999999999999999998655432
Q ss_pred ccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchh----------------HhhhcC---cccccc-
Q 018381 77 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL----------------DLIRGK---NFLMLM- 135 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~----------------~~~~~~---~~~~~~- 135 (357)
..+.|++|++||.+.+ ..++++.|||.-||++.||++|...+.+... +.|.+. .....+
T Consensus 187 nrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie 266 (376)
T KOG0669|consen 187 NRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIE 266 (376)
T ss_pred cceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhcc
Confidence 2244899999999887 5689999999999999999999977655410 111110 000001
Q ss_pred -ccccCCCC--------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 136 -DSCLEGHF--------SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 136 -~~~~~~~~--------~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
++.....+ +..-.++..+++..++..||.+|+++++++.|-
T Consensus 267 ~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 267 LEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred CCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence 00000000 111234788999999999999999999999883
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=209.40 Aligned_cols=175 Identities=19% Similarity=0.207 Sum_probs=131.0
Q ss_pred CCCCchhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC--CCCC--eEEecCCcccccCCC
Q 018381 1 MPNETLSKHLFHW-ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDGN--PRLSCFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~--~~~~--~kl~Dfg~~~~~~~~ 75 (357)
+.||||+..+.+- +...|++.+.+.++.+++.||.|||+.+ ||||||||.||++- .+|+ .||+|||.|+...++
T Consensus 99 C~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~-IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~ 177 (732)
T KOG4250|consen 99 CSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG-IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDN 177 (732)
T ss_pred cCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCcEEEeecCCCceEEeeecccccccCCCC
Confidence 5799999999642 3467999999999999999999999999 99999999999974 4454 799999999988776
Q ss_pred C---ccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh---------hhcC-c-ccccc----c
Q 018381 76 K---SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL---------IRGK-N-FLMLM----D 136 (357)
Q Consensus 76 ~---~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~---------~~~~-~-~~~~~----~ 136 (357)
. +..||..|++||+... ..|+...|.|||||++|+.+||..||-....+. ...+ . +.-.. +
T Consensus 178 s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eN 257 (732)
T KOG4250|consen 178 SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEEN 257 (732)
T ss_pred CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccC
Confidence 5 6689999999999984 788999999999999999999999986542210 0000 0 00000 0
Q ss_pred --cccC--CCC----ChhhHHHHHHHHHHhccCCCCCCC--CHHHHHHHh
Q 018381 137 --SCLE--GHF----SNDDGTELVRLASRCLQYEPRERP--NAKSLVASL 176 (357)
Q Consensus 137 --~~~~--~~~----~~~~~~~~~~li~~cl~~~p~~Rp--s~~~v~~~l 176 (357)
-.+. .++ .......+...+..+|..+|.+|- .+.+....+
T Consensus 258 gpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~ 307 (732)
T KOG4250|consen 258 GPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEV 307 (732)
T ss_pred CceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHH
Confidence 0011 111 223445677888889999999997 555555443
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-26 Score=182.56 Aligned_cols=111 Identities=18% Similarity=0.247 Sum_probs=97.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC--c-cccCCCCCCcccc
Q 018381 14 ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--S-YSTNLAFTPPEYL 90 (357)
Q Consensus 14 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~-~~gt~~y~aPE~~ 90 (357)
.++.+++..+=+|+..++.||.|||++-.+||||+||+||||+.+|+||+||||.+....++- + -.|.-.|||||.+
T Consensus 141 ~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri 220 (282)
T KOG0984|consen 141 KGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERI 220 (282)
T ss_pred cCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhc
Confidence 678899999999999999999999998669999999999999999999999999987665542 2 4577899999988
Q ss_pred cc----CCCCccccccchHHHHHHHHhCCCCCCcchhH
Q 018381 91 RT----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALD 124 (357)
Q Consensus 91 ~~----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~ 124 (357)
.. ..|+.+|||||||+++.||.+++.|+..+..+
T Consensus 221 ~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp 258 (282)
T KOG0984|consen 221 NPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP 258 (282)
T ss_pred CcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence 64 36788999999999999999999998766433
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-25 Score=196.74 Aligned_cols=159 Identities=21% Similarity=0.314 Sum_probs=133.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC----CCC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~ 76 (357)
+.||+|--.|. +-+.+.+..++.++.+|+-||-+||+++ ||.||||.+||+++.+|++||+|||+++..- ...
T Consensus 432 vnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kg-IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTk 508 (683)
T KOG0696|consen 432 VNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTK 508 (683)
T ss_pred ecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCC-eeeeeccccceEeccCCceEeeecccccccccCCccee
Confidence 35888877773 6688999999999999999999999999 9999999999999999999999999998432 345
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+++||+.|+|||.+..++|+.+.|-|||||+||||+.|+.||.+...+.+- ..+.+.. ..+|...+.+...++.
T Consensus 509 TFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF----~aI~ehn--vsyPKslSkEAv~ick 582 (683)
T KOG0696|consen 509 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF----QAIMEHN--VSYPKSLSKEAVAICK 582 (683)
T ss_pred eecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHH----HHHHHcc--CcCcccccHHHHHHHH
Confidence 789999999999999999999999999999999999999998876333221 1111221 2467778889999999
Q ss_pred HhccCCCCCCCC
Q 018381 157 RCLQYEPRERPN 168 (357)
Q Consensus 157 ~cl~~~p~~Rps 168 (357)
..|.+.|.+|..
T Consensus 583 g~ltK~P~kRLG 594 (683)
T KOG0696|consen 583 GLLTKHPGKRLG 594 (683)
T ss_pred HHhhcCCccccC
Confidence 999999999953
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-25 Score=190.40 Aligned_cols=158 Identities=18% Similarity=0.241 Sum_probs=124.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---CccccCCCCCCccccccC
Q 018381 17 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYSTNLAFTPPEYLRTG 93 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~~ 93 (357)
.++-.++..|+.|++.|+.|||+.+ |+||||||+||++..++.+||.|||+++..... +.++.|..|.|||++.+.
T Consensus 114 elDH~tis~i~yq~~~~ik~lhs~~-IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~ 192 (369)
T KOG0665|consen 114 ELDHETISYILYQMLCGIKHLHSAG-IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGM 192 (369)
T ss_pred hcchHHHHHHHHHHHHHHHHHHhcc-eeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheecc
Confidence 4667788999999999999999999 999999999999999999999999999876654 345778999999999998
Q ss_pred CCCccccccchHHHHHHHHhCCCCCCcc-------------------hhHh--------------hhcCcccccc-cccc
Q 018381 94 RVIPESVVYSFGTLLLDLLSGKHIPPSH-------------------ALDL--------------IRGKNFLMLM-DSCL 139 (357)
Q Consensus 94 ~~~~~~Dv~slG~~l~el~~g~~~~~~~-------------------~~~~--------------~~~~~~~~~~-~~~~ 139 (357)
.+.+..||||+||++.||++|+..|++. +.+. .....+.+.+ +..+
T Consensus 193 ~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f 272 (369)
T KOG0665|consen 193 GYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLF 272 (369)
T ss_pred CCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccc
Confidence 8999999999999999999999887754 0000 0001111111 1111
Q ss_pred CC--CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 140 EG--HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 140 ~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.. +.+.......++++.+||..+|++|.|+++++.|
T Consensus 273 ~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 273 PVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred cccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 11 1122345678999999999999999999999998
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-25 Score=204.04 Aligned_cols=167 Identities=19% Similarity=0.245 Sum_probs=127.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC-------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR------- 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~------- 73 (357)
+|||++-.+|. ..+.|.+..+..++.++.+|+++.|..| +|||||||+|||||.+|++||+|||||.-+.
T Consensus 711 IPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmG-FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskY 787 (1034)
T KOG0608|consen 711 IPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 787 (1034)
T ss_pred cCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhcc-ceecccCccceEEccCCceeeeeccccccceecccccc
Confidence 68999999996 5788999999999999999999999999 9999999999999999999999999985221
Q ss_pred --CCC-------------------------------------ccccCCCCCCccccccCCCCccccccchHHHHHHHHhC
Q 018381 74 --DGK-------------------------------------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG 114 (357)
Q Consensus 74 --~~~-------------------------------------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g 114 (357)
.+. +++||+.|+|||++....++..+|-||.|||||||+.|
T Consensus 788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g 867 (1034)
T KOG0608|consen 788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVG 867 (1034)
T ss_pred ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhC
Confidence 110 13589999999999998999999999999999999999
Q ss_pred CCCCCcchhHhh--hcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC---CHHHHHHH
Q 018381 115 KHIPPSHALDLI--RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP---NAKSLVAS 175 (357)
Q Consensus 115 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp---s~~~v~~~ 175 (357)
+.||-....... +..++...++ -.+..+.+.++.++|.+++ .+++.|. -.++|..|
T Consensus 868 ~~pf~~~tp~~tq~kv~nw~~~l~----~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaH 928 (1034)
T KOG0608|consen 868 QPPFLADTPGETQYKVINWRNFLH----IPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAH 928 (1034)
T ss_pred CCCccCCCCCcceeeeeehhhccc----cccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcC
Confidence 998865422111 1122222222 2333455667777776544 3666774 24445444
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-26 Score=205.25 Aligned_cols=166 Identities=19% Similarity=0.214 Sum_probs=136.4
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC---CCeEEecCCcccccCCC---C
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKNSRDG---K 76 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~---~ 76 (357)
+|+..+.|...+++.|++..-..++.||+.||.|||.++ |+|+||||+|||+... ..+||||||+++..+.. .
T Consensus 646 ~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn-IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRr 724 (888)
T KOG4236|consen 646 HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN-IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRR 724 (888)
T ss_pred cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc-eeeccCCchheeeccCCCCCceeeccccceeecchhhhhh
Confidence 577777777778899999999999999999999999999 9999999999999754 36999999999988765 3
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcch--hHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHA--LDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
+.+||+.|+|||+++...|...-|+||+||++|--++|..||..+. .+.+++..+ +.++ ..-.++++...++
T Consensus 725 sVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaF--MyPp----~PW~eis~~Aidl 798 (888)
T KOG4236|consen 725 SVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAF--MYPP----NPWSEISPEAIDL 798 (888)
T ss_pred hhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccc--ccCC----CchhhcCHHHHHH
Confidence 6789999999999999999999999999999999999998876432 222222211 1111 1123466789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
|...|+..-.+|.|....+.|
T Consensus 799 In~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 799 INNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred HHHHHHHHHHHhcchHhhccc
Confidence 999999999999999888775
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-25 Score=185.39 Aligned_cols=170 Identities=16% Similarity=0.245 Sum_probs=125.2
Q ss_pred chhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCcc-----c
Q 018381 5 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY-----S 79 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-----~ 79 (357)
+|.+.|. ...+++...+.-++.||++||.|||+.+ |+||||||.|.|++.|..+||||||+++........ +
T Consensus 142 DLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~-ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEV 218 (449)
T KOG0664|consen 142 DLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN-ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEV 218 (449)
T ss_pred hhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc-hhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHH
Confidence 3444453 5678999999999999999999999999 999999999999999999999999999977655433 3
Q ss_pred cCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcc----------------hhHhhh---cCcccccccccc
Q 018381 80 TNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSH----------------ALDLIR---GKNFLMLMDSCL 139 (357)
Q Consensus 80 gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~----------------~~~~~~---~~~~~~~~~~~~ 139 (357)
.|-.|.|||.++| ..|+.+.||||+||++.||+..+..|... ..+.++ .+....+++...
T Consensus 219 VTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~ 298 (449)
T KOG0664|consen 219 VTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGL 298 (449)
T ss_pred HHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCC
Confidence 4778999999998 56889999999999999999877665432 001111 111111111111
Q ss_pred CCC---------CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 140 EGH---------FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 140 ~~~---------~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+.+ .+..-..+...+...++..||++|.+..+.+.++.
T Consensus 299 k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 299 RAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred CCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 100 11122345667888999999999999998888753
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-25 Score=208.83 Aligned_cols=173 Identities=16% Similarity=0.237 Sum_probs=144.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc-c-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS-Y- 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~- 78 (357)
||+|+|.||++ .++..+-....+.|..||++||.|||.+. ++||||-.+||||..-..+|+.|||+++....... +
T Consensus 779 mP~G~LlDyvr-~hr~~igsq~lLnw~~QIAkgM~YLe~qr-lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~ 856 (1177)
T KOG1025|consen 779 MPLGCLLDYVR-EHRDNIGSQDLLNWCYQIAKGMKYLEEQR-LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS 856 (1177)
T ss_pred cccchHHHHHH-HhhccccHHHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhheeecCCCeEEEEecchhhccCccccccc
Confidence 79999999995 36788999999999999999999999998 99999999999999999999999999997654432 2
Q ss_pred ----ccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 79 ----STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 79 ----~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...+.|||=|.+...+++.++|||||||++||++| |..|+.+... ..+...++...+..-|+.++-++..
T Consensus 857 ~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~-----~eI~dlle~geRLsqPpiCtiDVy~ 931 (1177)
T KOG1025|consen 857 APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA-----EEIPDLLEKGERLSQPPICTIDVYM 931 (1177)
T ss_pred ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH-----HHhhHHHhccccCCCCCCccHHHHH
Confidence 12467999999999999999999999999999987 6677665432 2333444444445567789999999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
++.+||..|++.||+++++...+.+..
T Consensus 932 ~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 932 VMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred HHHHHhccCcccCccHHHHHHHHHHHh
Confidence 999999999999999999988775543
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=192.67 Aligned_cols=177 Identities=17% Similarity=0.220 Sum_probs=136.2
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----C--CceeecCCCCCeeeCCCCCeEEecCCcccccCC
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-----G--RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 74 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-----~--~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 74 (357)
|+|||+||| +...++....++++..+++||++||.. | .|.|||||+.|||+..+|.+-|+|+|||.....
T Consensus 292 e~GSL~DyL---~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~ 368 (513)
T KOG2052|consen 292 EHGSLYDYL---NRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 368 (513)
T ss_pred cCCcHHHHH---hhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecc
Confidence 689999999 568999999999999999999999952 2 299999999999999999999999999975543
Q ss_pred C--------CccccCCCCCCccccccCC----C--CccccccchHHHHHHHHhCC----------CCCCcc-----hhHh
Q 018381 75 G--------KSYSTNLAFTPPEYLRTGR----V--IPESVVYSFGTLLLDLLSGK----------HIPPSH-----ALDL 125 (357)
Q Consensus 75 ~--------~~~~gt~~y~aPE~~~~~~----~--~~~~Dv~slG~~l~el~~g~----------~~~~~~-----~~~~ 125 (357)
. ...+||-.|||||++...- + -..+||||||.++||++... .||.+. ..+.
T Consensus 369 ~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~ee 448 (513)
T KOG2052|consen 369 DTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEE 448 (513)
T ss_pred cCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHH
Confidence 3 3457999999999996521 1 23689999999999997532 233322 2222
Q ss_pred hhcCccccccccccC-CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 126 IRGKNFLMLMDSCLE-GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 126 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
+..-.-.+..++.+. .+...++...+.++|+.||..+|..|.|+--|.+.|.++.+
T Consensus 449 MrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 449 MRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 332222222333332 23345677889999999999999999999999999888764
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-25 Score=216.19 Aligned_cols=67 Identities=27% Similarity=0.359 Sum_probs=61.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 70 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 70 (357)
++||+|.+++. ..+.+++..++.|+.||+.||.|||+.+ ||||||||+||||+.++.+||+|||+++
T Consensus 86 ~~g~~L~~li~--~~~~l~~~~~~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 86 LIGGDVKSLLH--IYGYFDEEMAVKYISEVALALDYLHRHG-IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 47899999994 3467999999999999999999999999 9999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.4e-25 Score=190.68 Aligned_cols=171 Identities=21% Similarity=0.231 Sum_probs=137.0
Q ss_pred Cchhhhhc-----c-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc
Q 018381 4 ETLSKHLF-----H-WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS 77 (357)
Q Consensus 4 gsL~~~l~-----~-~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 77 (357)
|+|..||. + ...+.++--+...++.|++.|++|||..+ |||.||...|++|++..++||+|=.++|...+...
T Consensus 373 gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~-ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DY 451 (563)
T KOG1024|consen 373 GNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG-VIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDY 451 (563)
T ss_pred chHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC-cccchhhhhcceehhheeEEeccchhccccCcccc
Confidence 78888885 1 12356788899999999999999999999 99999999999999999999999999986554432
Q ss_pred c------ccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 78 Y------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 78 ~------~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
. ..+..||+||.+....++.++|||||||++|||+| |+.|+... ....+..++-...+..-|.+||++
T Consensus 452 hcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI-----DPfEm~~ylkdGyRlaQP~NCPDe 526 (563)
T KOG1024|consen 452 HCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI-----DPFEMEHYLKDGYRLAQPFNCPDE 526 (563)
T ss_pred cccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc-----CHHHHHHHHhccceecCCCCCcHH
Confidence 2 23568999999999999999999999999999988 44454321 111222223333444457789999
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
+..++..||...|++||+++|+..-|....
T Consensus 527 Lf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 527 LFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred HHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 999999999999999999999998776543
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-24 Score=201.06 Aligned_cols=175 Identities=16% Similarity=0.124 Sum_probs=123.2
Q ss_pred CCCCchhhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC
Q 018381 1 MPNETLSKHLFHWE----------------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 58 (357)
Q Consensus 1 ~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~ 58 (357)
++||+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.+
T Consensus 267 ~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~-ivHrDLKp~NILl~~~ 345 (507)
T PLN03224 267 ESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIG-IVHRDIKPENLLVTVD 345 (507)
T ss_pred CCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCchHhEEECCC
Confidence 46888888875311 123577889999999999999999999 9999999999999999
Q ss_pred CCeEEecCCcccccCCCC---c--cccCCCCCCccccccCCC----------------------CccccccchHHHHHHH
Q 018381 59 GNPRLSCFGLMKNSRDGK---S--YSTNLAFTPPEYLRTGRV----------------------IPESVVYSFGTLLLDL 111 (357)
Q Consensus 59 ~~~kl~Dfg~~~~~~~~~---~--~~gt~~y~aPE~~~~~~~----------------------~~~~Dv~slG~~l~el 111 (357)
+.+||+|||+++...... . ..+|+.|+|||.+..... ..+.|+||+||++|+|
T Consensus 346 ~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em 425 (507)
T PLN03224 346 GQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQM 425 (507)
T ss_pred CcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHH
Confidence 999999999987543322 1 234789999998864221 1246999999999999
Q ss_pred HhCCC-CCCcc--hhHhhhc-Cc----cccccccccCCCCChhhHHHHHHHHHHhccCCC---CCCCCHHHHHHHh
Q 018381 112 LSGKH-IPPSH--ALDLIRG-KN----FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP---RERPNAKSLVASL 176 (357)
Q Consensus 112 ~~g~~-~~~~~--~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p---~~Rps~~~v~~~l 176 (357)
++|.. |+... ....... .. +................++...+++.++|..+| .+|+|+.+++.|-
T Consensus 426 ~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp 501 (507)
T PLN03224 426 CVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHR 501 (507)
T ss_pred HhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCC
Confidence 99986 33221 1111110 00 011111111111223456889999999999876 6899999999983
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.6e-25 Score=171.18 Aligned_cols=169 Identities=20% Similarity=0.254 Sum_probs=125.5
Q ss_pred chhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccccc
Q 018381 5 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYST 80 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~g 80 (357)
+|.+|.. .-++.++...+..++.|+++||.++|+.+ +.||||||.|.||+.+|+.|++|||+++-++-. +..+.
T Consensus 86 dlkkyfd-slng~~d~~~~rsfmlqllrgl~fchshn-vlhrdlkpqnllin~ngelkladfglarafgipvrcysaevv 163 (292)
T KOG0662|consen 86 DLKKYFD-SLNGDLDPEIVRSFMLQLLRGLGFCHSHN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV 163 (292)
T ss_pred HHHHHHH-hcCCcCCHHHHHHHHHHHHhhhhhhhhhh-hhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceee
Confidence 3444542 24678999999999999999999999999 999999999999999999999999999866543 33456
Q ss_pred CCCCCCccccccCC-CCccccccchHHHHHHHHhCCCC-CCcch-hHhhhc-------------CccccccccccCCCCC
Q 018381 81 NLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHI-PPSHA-LDLIRG-------------KNFLMLMDSCLEGHFS 144 (357)
Q Consensus 81 t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~-~~~~~-~~~~~~-------------~~~~~~~~~~~~~~~~ 144 (357)
|.+|.+|+++.+.+ |+.+.|+||-||++.|+.....| |++.. .+.+.. ..+.++.+...-+.++
T Consensus 164 tlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~yp 243 (292)
T KOG0662|consen 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYP 243 (292)
T ss_pred eeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCcc
Confidence 89999999999865 68899999999999999865444 55431 111110 0011111111111111
Q ss_pred ---------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 145 ---------NDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 145 ---------~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.....-++++++.|..+|.+|.+++..+++
T Consensus 244 attswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 244 ATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred ccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 2234567899999999999999999998876
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-24 Score=204.60 Aligned_cols=170 Identities=11% Similarity=0.165 Sum_probs=138.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
|-|||..|++..-.+..+.|.-+..|++.++.|+.+||... +||||||-.|||++.++.|||+|||++..... ..
T Consensus 103 C~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk-viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRn 181 (953)
T KOG0587|consen 103 CGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRN 181 (953)
T ss_pred cCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc-eeeecccCceEEEeccCcEEEeeeeeeeeeeccccccc
Confidence 46899999996545788999999999999999999999998 99999999999999999999999999875443 35
Q ss_pred ccccCCCCCCcccccc-----CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccccc-ccccCCCCChhhHHH
Q 018381 77 SYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM-DSCLEGHFSNDDGTE 150 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 150 (357)
+++||+.|||||++.- ..|+.++|+||||++..||..|.+|+... ..-..+.... .+.....-+...+.+
T Consensus 182 T~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm----HPmraLF~IpRNPPPkLkrp~kWs~~ 257 (953)
T KOG0587|consen 182 TFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM----HPMRALFLIPRNPPPKLKRPKKWSKK 257 (953)
T ss_pred CcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc----chhhhhccCCCCCCccccchhhHHHH
Confidence 7899999999999854 34677999999999999999998765432 1112222221 222222235667899
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.++|..||.+|..+||++.++++|
T Consensus 258 FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 258 FNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred HHHHHHHHHhhccccCcchhhhccC
Confidence 9999999999999999999999876
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-24 Score=205.52 Aligned_cols=167 Identities=25% Similarity=0.266 Sum_probs=119.9
Q ss_pred CchhhhhccC-CC-CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC---C--CCeEEecCCcccccCCCC
Q 018381 4 ETLSKHLFHW-EN-QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---D--GNPRLSCFGLMKNSRDGK 76 (357)
Q Consensus 4 gsL~~~l~~~-~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~---~--~~~kl~Dfg~~~~~~~~~ 76 (357)
-||.|++... .. ....--..+.++.|+++||.+||+.+ ||||||||.||||+. + ..++|+|||+++....+.
T Consensus 587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~-iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK-IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc-cccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence 3788888421 00 01111345778999999999999998 999999999999975 3 358999999998665443
Q ss_pred -------ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHH
Q 018381 77 -------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 149 (357)
Q Consensus 77 -------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
...||-+|+|||++.....+.+.||+|+||++|+.++|...+++.... +..++..-...........++
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl~~~~~L~~L~~~~d~-- 741 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANILTGNYTLVHLEPLPDC-- 741 (903)
T ss_pred chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH--hhhhhhcCccceeeeccCchH--
Confidence 346899999999999888888999999999999999985444333211 111111111111111111122
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+..+||.+|+..+|..||++.+|+.|
T Consensus 742 eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 742 EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 78999999999999999999999987
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.4e-24 Score=182.06 Aligned_cols=162 Identities=17% Similarity=0.311 Sum_probs=130.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCccccc----CCCC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS----RDGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~----~~~~ 76 (357)
++||+|--++ ++.+.+|++.+..+..+|+-||.|||++| ||.||||.+|||++..|.+||.|+|+++.. ...+
T Consensus 333 v~ggdlmfhm--qrqrklpeeharfys~ei~lal~flh~rg-iiyrdlkldnvlldaeghikltdygmcke~l~~gd~ts 409 (593)
T KOG0695|consen 333 VNGGDLMFHM--QRQRKLPEEHARFYSAEICLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTS 409 (593)
T ss_pred ecCcceeeeh--hhhhcCcHHHhhhhhHHHHHHHHHHhhcC-eeeeeccccceEEccCCceeecccchhhcCCCCCcccc
Confidence 5788887666 35678999999999999999999999999 999999999999999999999999999843 2346
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhh----hcCccccccccccCCCCChhhHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI----RGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
+++|||.|.|||.+++..|+.+.|-|+|||+++||+.|+.||.--..+.. ..-.++.+++..++ +|...+-...
T Consensus 410 tfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir--iprslsvkas 487 (593)
T KOG0695|consen 410 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR--IPRSLSVKAS 487 (593)
T ss_pred cccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc--ccceeehhhH
Confidence 78999999999999999999999999999999999999999863321111 11112233333333 3444556677
Q ss_pred HHHHHhccCCCCCCC
Q 018381 153 RLASRCLQYEPRERP 167 (357)
Q Consensus 153 ~li~~cl~~~p~~Rp 167 (357)
.+++..|.+||.+|.
T Consensus 488 ~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 488 HVLKGFLNKDPKERL 502 (593)
T ss_pred HHHHHhhcCCcHHhc
Confidence 889999999999995
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.3e-23 Score=173.58 Aligned_cols=107 Identities=21% Similarity=0.325 Sum_probs=104.1
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
....++.++.+|+.+++.++|++|+..|++||+++|. ++.+|.|||.+|.++|+|+.|+++|+.||.+||.+.++|-++
T Consensus 77 ~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~RL 155 (304)
T KOG0553|consen 77 DKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGRL 155 (304)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHHH
Confidence 4567899999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|.+|+.+|+|++|++.|++||++||+|.
T Consensus 156 G~A~~~~gk~~~A~~aykKaLeldP~Ne 183 (304)
T KOG0553|consen 156 GLAYLALGKYEEAIEAYKKALELDPDNE 183 (304)
T ss_pred HHHHHccCcHHHHHHHHHhhhccCCCcH
Confidence 9999999999999999999999999974
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-23 Score=168.51 Aligned_cols=158 Identities=22% Similarity=0.239 Sum_probs=120.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC-CCeEEecCCcccccCCCCc---cccCCCCCCcccccc
Q 018381 17 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSRDGKS---YSTNLAFTPPEYLRT 92 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~---~~gt~~y~aPE~~~~ 92 (357)
.|+.-.+...+.++++||.|||++| |+|||+||.|++|+.. -.++|+|.|+|.++..+.. .+.+..|--||.+..
T Consensus 128 tl~d~dIryY~~elLkALdyCHS~G-ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVd 206 (338)
T KOG0668|consen 128 TLTDYDIRYYIYELLKALDYCHSMG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206 (338)
T ss_pred hhchhhHHHHHHHHHHHHhHHHhcC-cccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheee
Confidence 4566677889999999999999999 9999999999999965 4599999999998887654 356778899998876
Q ss_pred -CCCCccccccchHHHHHHHHhCCCCCCcchhH--------------hhh------------------cCcccccccccc
Q 018381 93 -GRVIPESVVYSFGTLLLDLLSGKHIPPSHALD--------------LIR------------------GKNFLMLMDSCL 139 (357)
Q Consensus 93 -~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~--------------~~~------------------~~~~~~~~~~~~ 139 (357)
+.++.+-|+|||||++..|+..+.||+-...+ .+. +....+.....+
T Consensus 207 y~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi 286 (338)
T KOG0668|consen 207 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFI 286 (338)
T ss_pred chhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhC
Confidence 56788999999999999999999998743100 000 000001111111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...-..-.+++..+++.+.|.+|..+|+|+.+.+.|
T Consensus 287 ~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 287 NSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred CccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 111122345889999999999999999999999987
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-23 Score=188.35 Aligned_cols=170 Identities=19% Similarity=0.232 Sum_probs=128.9
Q ss_pred chhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-CeEEecCCcccccCCCC--cccc
Q 018381 5 TLSKHLFHW-ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDGK--SYST 80 (357)
Q Consensus 5 sL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~--~~~g 80 (357)
+|.+.|... .+-.|....+..++.|+.-||..|-..+ |+|.||||+|||++++. .+||||||.|.....+. .+..
T Consensus 519 NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~-vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLV 597 (752)
T KOG0670|consen 519 NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG-VLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLV 597 (752)
T ss_pred hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC-eeecccCccceEeccCcceeeeccCccccccccccccHHHH
Confidence 566666432 2346788889999999999999999999 99999999999999765 47999999998776654 3455
Q ss_pred CCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhh----------------hcCccc------------
Q 018381 81 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI----------------RGKNFL------------ 132 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~----------------~~~~~~------------ 132 (357)
+..|.|||.+.|-+|+...|+||+||+||||.||+..|++...+.+ ....+.
T Consensus 598 SRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~ 677 (752)
T KOG0670|consen 598 SRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLY 677 (752)
T ss_pred HHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEE
Confidence 7789999999999999999999999999999999999887521111 000000
Q ss_pred ------------ccc---cc------c-cC-CCCC---hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 133 ------------MLM---DS------C-LE-GHFS---NDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 133 ------------~~~---~~------~-~~-~~~~---~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.++ .+ . +. ..++ +....++.+|+..||..||.+|.|..+.|.|
T Consensus 678 ~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 678 IEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred EeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 000 00 0 00 0111 2345679999999999999999999999987
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=166.01 Aligned_cols=136 Identities=29% Similarity=0.450 Sum_probs=119.9
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-CCCeEEecCCcccccCCC----C
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+|++|.+++.. ....+++..++.++.++++++.+||+.+ ++|+||+|.||+++. ++.++|+|||.+...... .
T Consensus 74 ~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~ 151 (215)
T cd00180 74 EGGSLKDLLKE-NEGKLSEDEILRILLQILEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLK 151 (215)
T ss_pred CCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhh
Confidence 57899999842 2257999999999999999999999999 999999999999999 899999999998866543 3
Q ss_pred ccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
...+...|++||.+... ..+.++|+|++|+++++| ..+.+++
T Consensus 152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l 194 (215)
T cd00180 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLI 194 (215)
T ss_pred cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHH
Confidence 34577899999999876 778899999999999998 5799999
Q ss_pred HHhccCCCCCCCCHHHHHHHh
Q 018381 156 SRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~l 176 (357)
..|+..+|++||++.++++++
T Consensus 195 ~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 195 RKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHhhCCcccCcCHHHHhhCC
Confidence 999999999999999998764
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-21 Score=162.77 Aligned_cols=169 Identities=20% Similarity=0.229 Sum_probs=120.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC--CCCCeEEecCCcccccCCCC-c
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDGNPRLSCFGLMKNSRDGK-S 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~--~~~~~kl~Dfg~~~~~~~~~-~ 77 (357)
.|-|+|.+-+ ....+-+.-..+++.|+++|+.|||+++ +||||||.+||||- +...+||||||+.+..+..- .
T Consensus 104 aP~gdL~snv---~~~GigE~~~K~v~~ql~SAi~fMHskn-lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~ 179 (378)
T KOG1345|consen 104 APRGDLRSNV---EAAGIGEANTKKVFAQLLSAIEFMHSKN-LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY 179 (378)
T ss_pred Cccchhhhhc---CcccccHHHHHHHHHHHHHHHHHhhccc-hhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence 3778999888 5577889999999999999999999999 99999999999984 33469999999987555432 2
Q ss_pred cccCCCCCCcccccc---CC--CCccccccchHHHHHHHHhCCCCCCcchhHh---hhcCccccccccccCCCCChhhHH
Q 018381 78 YSTNLAFTPPEYLRT---GR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDL---IRGKNFLMLMDSCLEGHFSNDDGT 149 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~---~~--~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
..-+..|.+||.... ++ ..+.+|+|.||++++..+||+.||.-..... +.-..+..-.....+..+. ..++
T Consensus 180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~-~fs~ 258 (378)
T KOG1345|consen 180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFN-PFSE 258 (378)
T ss_pred hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhc-ccCH
Confidence 334678999987643 22 4678999999999999999999886321100 0001111111111111121 2456
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHH
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVA 174 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~ 174 (357)
.+.++.++-|..++++|--..++.+
T Consensus 259 ~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 259 KALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred HHHHHHHHhcCCcccccchhHHHHH
Confidence 7888899999999999965555544
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-21 Score=172.70 Aligned_cols=53 Identities=15% Similarity=0.178 Sum_probs=48.5
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 55 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill 55 (357)
|-+|..+|...+-+.++...+..|+.||+.||.|||.+..|||.||||+|||+
T Consensus 169 GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 169 GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL 221 (590)
T ss_pred hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence 56788888766778899999999999999999999998779999999999998
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.8e-21 Score=177.72 Aligned_cols=171 Identities=17% Similarity=0.150 Sum_probs=131.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC----CCC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~ 76 (357)
+-||+|++--+ -.+++++.++..++++.+.|+.|||+++ -+|||||-.|||+++.|.+|++|||.+-.+. ...
T Consensus 94 cgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~g-k~hRdiKGanilltd~gDvklaDfgvsaqitati~Krk 170 (829)
T KOG0576|consen 94 CGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQG-KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRK 170 (829)
T ss_pred cCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCC-cccccccccceeecccCceeecccCchhhhhhhhhhhh
Confidence 35789988664 6789999999999999999999999999 9999999999999999999999999976544 346
Q ss_pred ccccCCCCCCcccc---ccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 77 SYSTNLAFTPPEYL---RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 ~~~gt~~y~aPE~~---~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
+++||+.|||||+. ..+.|...+|+|++|+...|+---+.|-+.- ...-.-.-+.+..-......-.....+.+.+
T Consensus 171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl-hpmr~l~LmTkS~~qpp~lkDk~kws~~fh~ 249 (829)
T KOG0576|consen 171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL-HPMRALFLMTKSGFQPPTLKDKTKWSEFFHN 249 (829)
T ss_pred cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc-chHHHHHHhhccCCCCCcccCCccchHHHHH
Confidence 78999999999976 3477889999999999999997666543221 1100000001111111111223446788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
|++.|+.++|++||+++.++.|
T Consensus 250 fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 250 FVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred HHHHHhcCCCccCCChhhheec
Confidence 9999999999999999988764
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-20 Score=181.16 Aligned_cols=169 Identities=17% Similarity=0.144 Sum_probs=131.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+|+ +|+.++. ..+.++..++.-+++|++.|+.|||+.| +.|||||++|+++..+|.+||+|||.+..+...
T Consensus 403 ~~~-Dlf~~~~--~~~~~~~~e~~c~fKqL~~Gv~y~h~~G-iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~ 478 (601)
T KOG0590|consen 403 CPY-DLFSLVM--SNGKLTPLEADCFFKQLLRGVKYLHSMG-LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNI 478 (601)
T ss_pred ccH-HHHHHHh--cccccchhhhhHHHHHHHHHHHHHHhcC-ceeccCccccEEEecCCceEEeecCcceeeccCcchhh
Confidence 355 7888884 3457899999999999999999999999 999999999999999999999999998754432
Q ss_pred ---CccccCCCCCCccccccCCCCc-cccccchHHHHHHHHhCCCCCCcchhHhhh-----cCccccccccccCCCCChh
Q 018381 76 ---KSYSTNLAFTPPEYLRTGRVIP-ESVVYSFGTLLLDLLSGKHIPPSHALDLIR-----GKNFLMLMDSCLEGHFSND 146 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~-~~Dv~slG~~l~el~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 146 (357)
....|+-+|+|||++.+..|.+ ..||||.|+++..|++|+.||.......-. ........... ...-..
T Consensus 479 ~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 556 (601)
T KOG0590|consen 479 HESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGP--NRLLSL 556 (601)
T ss_pred hhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccCh--HHHHHh
Confidence 2356889999999999999987 579999999999999999887543111100 00000000000 011234
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 147 DGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 147 ~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+...+.+|.+||+.+|.+|.|+.+|++.
T Consensus 557 lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 557 LPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred chhhHHHHHHHHccCChhheecHHHHhhC
Confidence 67889999999999999999999999874
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.9e-20 Score=156.30 Aligned_cols=175 Identities=21% Similarity=0.247 Sum_probs=136.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceee-cCCCCCeeeCCCCCeEEecCCcccccCCCCccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~-dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 79 (357)
||-|||+..|++..+-.++-.++.+++.++++|+.|||+-.+++-| -|.+..|+|+++.+.+|+ .+-.++........
T Consensus 269 mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~gr~ 347 (448)
T KOG0195|consen 269 MPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVGRA 347 (448)
T ss_pred ccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeeccccc
Confidence 7899999999877777889999999999999999999998877777 899999999999887664 22222222223334
Q ss_pred cCCCCCCccccccCCCC---ccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 80 TNLAFTPPEYLRTGRVI---PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~---~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
-.+.||+||.++..+-+ .++|+|||.+++|||.|...||..... ++-. .++.-..++..+|++.+..+.+++.
T Consensus 348 y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlsp--mecg--mkialeglrv~ippgis~hm~klm~ 423 (448)
T KOG0195|consen 348 YSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSP--MECG--MKIALEGLRVHIPPGISRHMNKLMN 423 (448)
T ss_pred cCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCc--hhhh--hhhhhccccccCCCCccHHHHHHHH
Confidence 47899999999875433 478999999999999999988765321 1111 1222334555678889999999999
Q ss_pred HhccCCCCCCCCHHHHHHHhCccc
Q 018381 157 RCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
-|+..||.+||.+..|+-.|++++
T Consensus 424 icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 424 ICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHhcCCCCcCCCcceehhhHHHhc
Confidence 999999999999999998887654
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.4e-21 Score=172.82 Aligned_cols=116 Identities=13% Similarity=0.176 Sum_probs=104.2
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC--CCccc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSYS 79 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--~~~~~ 79 (357)
+|-+|+++|- .+..+++.++..|++||+.|+++||+.+ |||||||-+||.++.+|.+||+|||.+..... ...+.
T Consensus 653 ~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~-ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f~ 729 (772)
T KOG1152|consen 653 EGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQG-IVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFV 729 (772)
T ss_pred CCcchhhhhh--ccCccchHHHHHHHHHHHhccccccccC-ceecccccccEEEecCCeEEEeeccchhhhcCCCcceee
Confidence 4668999993 5678999999999999999999999999 99999999999999999999999999875544 46889
Q ss_pred cCCCCCCccccccCCC-CccccccchHHHHHHHHhCCCCCCc
Q 018381 80 TNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPS 120 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~ 120 (357)
||..|.|||++.|.+| +..-|||++|+++|.++....|+++
T Consensus 730 gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 730 GTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred eeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 9999999999999888 5578999999999999988877653
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.3e-20 Score=161.68 Aligned_cols=158 Identities=25% Similarity=0.300 Sum_probs=115.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-CCCeEEecCCccccc-----------------CC--CC
Q 018381 17 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNS-----------------RD--GK 76 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~-----------------~~--~~ 76 (357)
.++..++..+++.++.||.++|.+| ||||||||+|+|.+. .+.-.|+|||++... .. +.
T Consensus 128 ~l~~~~i~~Yl~~ll~Al~~~h~~G-IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~ 206 (418)
T KOG1167|consen 128 SLSLAEIRWYLRNLLKALAHLHKNG-IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGK 206 (418)
T ss_pred cCCHHHHHHHHHHHHHHhhhhhccC-ccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccC
Confidence 5778899999999999999999999 999999999999984 566789999998510 00 00
Q ss_pred -----------------------------ccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchh---
Q 018381 77 -----------------------------SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL--- 123 (357)
Q Consensus 77 -----------------------------~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~--- 123 (357)
...||++|.|||++.. +.-+++.||||.||+++.+++++.||+....
T Consensus 207 ~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~ 286 (418)
T KOG1167|consen 207 DVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDAD 286 (418)
T ss_pred cccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccc
Confidence 1247999999999976 4558899999999999999999999864310
Q ss_pred -----------Hhhh------cC-------c----------cccc-cccccC--------CCCChhhHHHHHHHHHHhcc
Q 018381 124 -----------DLIR------GK-------N----------FLML-MDSCLE--------GHFSNDDGTELVRLASRCLQ 160 (357)
Q Consensus 124 -----------~~~~------~~-------~----------~~~~-~~~~~~--------~~~~~~~~~~~~~li~~cl~ 160 (357)
..++ +. + +... ...... .......+..+.+++.+|+.
T Consensus 287 al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le 366 (418)
T KOG1167|consen 287 ALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLE 366 (418)
T ss_pred hHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHcc
Confidence 0000 00 0 0000 000000 01111234578999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 018381 161 YEPRERPNAKSLVAS 175 (357)
Q Consensus 161 ~~p~~Rps~~~v~~~ 175 (357)
.||.+|.|+++.++|
T Consensus 367 ~np~kRitAEeALkH 381 (418)
T KOG1167|consen 367 LNPQKRITAEDALKH 381 (418)
T ss_pred CChhhcccHHHHhcC
Confidence 999999999999987
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-19 Score=153.89 Aligned_cols=118 Identities=23% Similarity=0.245 Sum_probs=102.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++++|.+++.. ....+++..+..++.+++.++.+||+.+ ++|+||+|.||+++.++.++|+|||++......
T Consensus 79 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (225)
T smart00221 79 CEGGDLFDYLRK-KGGKLSEEEARFYLRQILEALEYLHSLG-IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALL 156 (225)
T ss_pred cCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccc
Confidence 367799999953 2222899999999999999999999998 999999999999999999999999998866544
Q ss_pred CccccCCCCCCcccc-ccCCCCccccccchHHHHHHHHhCCCCCCc
Q 018381 76 KSYSTNLAFTPPEYL-RTGRVIPESVVYSFGTLLLDLLSGKHIPPS 120 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~~g~~~~~~ 120 (357)
....++..|++||.+ ....++.++|+||||+++++|++|+.||..
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 345678899999998 566778899999999999999999998865
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-19 Score=163.00 Aligned_cols=160 Identities=23% Similarity=0.346 Sum_probs=118.2
Q ss_pred CCCchhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 2 PNETLSKHLFH-WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 2 ~~gsL~~~l~~-~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
.-++|.+||.+ +.....++.....++.|++.|++| ++ .+|+|+||.||++..+..+||.|||+........
T Consensus 339 ~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~-~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~ 414 (516)
T KOG1033|consen 339 EKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG-LIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAP 414 (516)
T ss_pred hhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc-chhhhccccccccccchhhhhhhhhheeecccCCcccc
Confidence 34689999963 334567899999999999999999 88 9999999999999999999999999976443322
Q ss_pred ------ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCC-CCCCcchhHhhhcCccccccccccCCCCChhhHH
Q 018381 77 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK-HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 149 (357)
Q Consensus 77 ------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
...||.+||+||.+.+..|+.++||||||++++|++.-. ..+.. ...+..+-+..+.+.+-.+. +
T Consensus 415 ~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er-------~~t~~d~r~g~ip~~~~~d~-p 486 (516)
T KOG1033|consen 415 AAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER-------IATLTDIRDGIIPPEFLQDY-P 486 (516)
T ss_pred hhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH-------HHhhhhhhcCCCChHHhhcC-c
Confidence 346899999999999999999999999999999998721 11111 11111111112221111122 3
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHH
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLV 173 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~ 173 (357)
.-..|+++++...|.+||++.++.
T Consensus 487 ~e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 487 EEYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred HHHHHHHHhcCCCcccCchHHHHh
Confidence 345899999999999999655443
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.5e-18 Score=154.09 Aligned_cols=179 Identities=16% Similarity=0.142 Sum_probs=134.9
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC-----CCeEEecCCcccccC---
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-----GNPRLSCFGLMKNSR--- 73 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~-----~~~kl~Dfg~~~~~~--- 73 (357)
-|.||.++......+.++..++++|+.|++.+|++||+.| ++||||||+|++++.. ..+.|.|||+++...
T Consensus 103 ~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G-~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~ 181 (322)
T KOG1164|consen 103 LGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG-FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVG 181 (322)
T ss_pred cCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC-cccCCcCHHHeeecCCCCcccceEEEEecCCCccccccC
Confidence 4678888774434588999999999999999999999999 9999999999999865 358999999998221
Q ss_pred CC-----------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCC
Q 018381 74 DG-----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 142 (357)
Q Consensus 74 ~~-----------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
.. ..+.||..|.++.+..+...+.+.|+||++.++.+++.|..||........ ...+...........
T Consensus 182 ~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~~~~~~~~ 260 (322)
T KOG1164|consen 182 DSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDPRKLLTDR 260 (322)
T ss_pred CCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHhhhhcccc
Confidence 11 124589999999999999999999999999999999999988865321111 011111111111110
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.....+..+..+...+-..+...+|....+...|......
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 261 FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 2334556788888888889999999999999987766544
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.4e-18 Score=144.54 Aligned_cols=176 Identities=14% Similarity=0.154 Sum_probs=136.8
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-----CeEEecCCcccccCCC--
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-----NPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-----~~kl~Dfg~~~~~~~~-- 75 (357)
|-||+|+. +++++.|+..+++.++.|++.-++|+|++. +|.|||||+|+||+.-+ .+.++|||+++.+.+.
T Consensus 107 GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH~k~-LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 107 GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVHEKD-LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHHhcc-eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 66888876 678999999999999999999999999999 99999999999998544 3789999999976543
Q ss_pred ---------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccccccc---ccCCCC
Q 018381 76 ---------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS---CLEGHF 143 (357)
Q Consensus 76 ---------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 143 (357)
++..||..||+=-...+..-+.+.|+-|+|-++.+.+.|..||.+-..+..+ ..+.++-+. ......
T Consensus 185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK-~kYeKIGe~Kr~T~i~~L 263 (449)
T KOG1165|consen 185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNK-EKYEKIGETKRSTPIEVL 263 (449)
T ss_pred cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchH-HHHHHhccccccCCHHHH
Confidence 3567999999988778888889999999999999999999999864222111 111121111 111122
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
..+.|.++...+...-..+-.+-|..+-+...+..+..
T Consensus 264 c~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 264 CEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred HhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 34567889999888888899999998888776655544
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-17 Score=146.01 Aligned_cols=161 Identities=16% Similarity=0.170 Sum_probs=120.3
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee--CCCCC--eEEecCCcccccC------
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF--DQDGN--PRLSCFGLMKNSR------ 73 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill--~~~~~--~kl~Dfg~~~~~~------ 73 (357)
.||.+|+ ..+..+.....-|+.|+++|+.|||..+ |.|||+|++|||+ ++|+. +.|+|||.+--..
T Consensus 327 ~tLr~yl---~~~~~s~r~~~~~laQlLEav~hL~~hg-vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlql 402 (598)
T KOG4158|consen 327 QTLREYL---WTRHRSYRTGRVILAQLLEAVTHLHKHG-VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQL 402 (598)
T ss_pred hhHHHHH---hcCCCchHHHHHHHHHHHHHHHHHHHcc-chhhcccccceEEEecCCCCcEEEEcccceeeecccccccc
Confidence 3677888 5567778888889999999999999999 9999999999998 44543 6899999764221
Q ss_pred ----CCCccccCCCCCCcccccc--CCC----CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCC
Q 018381 74 ----DGKSYSTNLAFTPPEYLRT--GRV----IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 143 (357)
Q Consensus 74 ----~~~~~~gt~~y~aPE~~~~--~~~----~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
..-...|+-..||||+... ++. -.++|.|+.|.+.||+++...||+....-.+....+++ ...+..
T Consensus 403 py~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe----~qLPal 478 (598)
T KOG4158|consen 403 PYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQE----SQLPAL 478 (598)
T ss_pred ccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhh----hhCCCC
Confidence 1123456778899998864 222 24899999999999999999998864322222222211 112345
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHH
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSL 172 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v 172 (357)
+..+++.+++++...|+.||++|++..-.
T Consensus 479 p~~vpp~~rqlV~~lL~r~pskRvsp~iA 507 (598)
T KOG4158|consen 479 PSRVPPVARQLVFDLLKRDPSKRVSPNIA 507 (598)
T ss_pred cccCChHHHHHHHHHhcCCccccCCccHH
Confidence 67788999999999999999999875543
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.4e-18 Score=156.09 Aligned_cols=181 Identities=19% Similarity=0.221 Sum_probs=133.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+.-|||.|.+. .....+++.....++++|+.||.|+|...-..|+.+++.|++++....+||+|||+.......
T Consensus 29 c~rGsl~D~i~-~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~ 107 (484)
T KOG1023|consen 29 CSRGSLLDILS-NEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEA 107 (484)
T ss_pred ecCccHHhHHh-ccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccc
Confidence 35699999995 356789999999999999999999999862399999999999999999999999997655321
Q ss_pred -CccccCCCCCCccccccCC-------CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcc---ccccccccCCCCC
Q 018381 76 -KSYSTNLAFTPPEYLRTGR-------VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF---LMLMDSCLEGHFS 144 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~-------~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 144 (357)
.......-|.|||.+.+.. .+.+.|+||||++++|+++.+.||.......-....+ .......+++...
T Consensus 108 ~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~ 187 (484)
T KOG1023|consen 108 HHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIE 187 (484)
T ss_pred cchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchh
Confidence 1112245799999998631 3567999999999999999999987642221111111 1111122222221
Q ss_pred -h-hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 145 -N-DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 145 -~-~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
. ..++++..++..||..+|..||++.+|...++.+...
T Consensus 188 ~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 188 LLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred hhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 1 3455799999999999999999999999887765543
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-18 Score=150.14 Aligned_cols=138 Identities=20% Similarity=0.229 Sum_probs=95.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc-cccCCCCCCcccccc----
Q 018381 18 MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS-YSTNLAFTPPEYLRT---- 92 (357)
Q Consensus 18 l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~gt~~y~aPE~~~~---- 92 (357)
+...-++.+..|+++.+++||+.| ++|+||||+|++++.+|.++|+||+.....+.... ...+..|.|||....
T Consensus 142 l~~~arl~lT~Q~I~lvA~Lh~~G-lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~ 220 (288)
T PF14531_consen 142 LAFAARLSLTVQMIRLVANLHSYG-LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQF 220 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSC
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcc-eEecccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhccc
Confidence 344455667799999999999999 99999999999999999999999998776655433 344678999997743
Q ss_pred ----CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCC
Q 018381 93 ----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 166 (357)
Q Consensus 93 ----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 166 (357)
-.++.+.|.|+||+++|.|.||..||........... .+. .+. +.|+.++.||..+|..+|.+|
T Consensus 221 ~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~--------~f~-~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 221 GQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW--------DFS-RCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG--------GGT-TSS----HHHHHHHHHHT-SSGGGS
T ss_pred CcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc--------cch-hcC-CcCHHHHHHHHHHccCCcccC
Confidence 2467899999999999999999998764421111111 222 223 788999999999999999987
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.1e-17 Score=149.67 Aligned_cols=107 Identities=24% Similarity=0.447 Sum_probs=102.5
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+..+...+..|+.+|+.|+|..|+..|++||+.+|+ ++.+|.|||.||.++|.+..|++|++++|+++|++.++|.+.
T Consensus 354 ~pe~A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RK 432 (539)
T KOG0548|consen 354 NPEKAEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRK 432 (539)
T ss_pred ChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 3555778889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|.++..+.+|+.|+++|++++++||++.
T Consensus 433 g~al~~mk~ydkAleay~eale~dp~~~ 460 (539)
T KOG0548|consen 433 GAALRAMKEYDKALEAYQEALELDPSNA 460 (539)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchhH
Confidence 9999999999999999999999999864
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.7e-17 Score=129.29 Aligned_cols=109 Identities=17% Similarity=0.248 Sum_probs=101.7
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCC----chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChH
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV----SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT 322 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~ 322 (357)
.....+..++..|+.+|+.|+|++|...|..||++.|.. ...+|.|||.|+++++.++.||.+|.|||+++|.+-+
T Consensus 90 k~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty~k 169 (271)
T KOG4234|consen 90 KAIEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTYEK 169 (271)
T ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchhHH
Confidence 346778899999999999999999999999999999971 2348999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 323 AFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 323 a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|+.++|.+|..+.+|++|+++|++.+++||.++
T Consensus 170 Al~RRAeayek~ek~eealeDyKki~E~dPs~~ 202 (271)
T KOG4234|consen 170 ALERRAEAYEKMEKYEEALEDYKKILESDPSRR 202 (271)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchH
Confidence 999999999999999999999999999999754
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-16 Score=126.41 Aligned_cols=100 Identities=13% Similarity=0.154 Sum_probs=96.8
Q ss_pred HHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhC
Q 018381 255 SKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGL 334 (357)
Q Consensus 255 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~l 334 (357)
+...|..++..|++++|+..|++++.++|. +..+|+++|.++..+|++++|+..|++|++++|+++.+++++|.++..+
T Consensus 27 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l~~~ 105 (144)
T PRK15359 27 VYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCLKMM 105 (144)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc
Confidence 556799999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhhccccccc
Q 018381 335 GMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 335 g~~~~A~~~~~~al~l~p~~~ 355 (357)
|++++|+..|+++++++|++.
T Consensus 106 g~~~eAi~~~~~Al~~~p~~~ 126 (144)
T PRK15359 106 GEPGLAREAFQTAIKMSYADA 126 (144)
T ss_pred CCHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999863
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.2e-17 Score=145.20 Aligned_cols=172 Identities=24% Similarity=0.276 Sum_probs=127.9
Q ss_pred CCCCchhhhhccCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-CeEEecCCcccccCC---
Q 018381 1 MPNETLSKHLFHWEN--QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRD--- 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~--- 74 (357)
+.+++|.+++.. .. ..++......++.|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||+++....
T Consensus 80 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~-~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 80 VDGGSLEDLLKK-IGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred CCCCcHHHHHHh-cccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence 467888877632 12 37999999999999999999999999 99999999999999988 699999999874432
Q ss_pred -------CCccccCCCCCCcccccc---CCCCccccccchHHHHHHHHhCCCCCCcchh----HhhhcCccccccccccC
Q 018381 75 -------GKSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL----DLIRGKNFLMLMDSCLE 140 (357)
Q Consensus 75 -------~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~ 140 (357)
.....||..|++||.+.+ ...+...|+||+|++++++++|..|+..... .... ..+.....+...
T Consensus 158 ~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~ 236 (384)
T COG0515 158 TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTL-KIILELPTPSLA 236 (384)
T ss_pred cccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHH-HHHHhcCCcccc
Confidence 245578999999999987 5678899999999999999999988554321 0110 000111100011
Q ss_pred CCCCh----hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 141 GHFSN----DDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 141 ~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..... .....+.+++..|+..+|..|.+.......
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 237 SPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11111 123578999999999999999988877665
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.69 E-value=9e-17 Score=145.58 Aligned_cols=103 Identities=29% Similarity=0.494 Sum_probs=99.7
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
+..++.+|+.+|..|+|+.|+.+|.+||.++|. +..+|.||+.+|..+|+|++|+++..+.++++|+++++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 356788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 018381 332 FGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
..+|+|++|+..|.++|+.||+|.
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~ 104 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNK 104 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchH
Confidence 999999999999999999999874
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.2e-17 Score=135.72 Aligned_cols=180 Identities=12% Similarity=0.121 Sum_probs=135.6
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC---CCeEEecCCcccccCCC----
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKNSRDG---- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~---- 75 (357)
|-||+++. .-..+.++..+++.++-|++.-++|+|.++ +|||||||+|.|.+-+ ..+.|+|||+++.+.+.
T Consensus 94 GPsLEdLf-nfC~R~ftmkTvLMLaDQml~RiEyvH~r~-fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~ 171 (341)
T KOG1163|consen 94 GPSLEDLF-NFCSRRFTMKTVLMLADQMLSRIEYVHLRN-FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQ 171 (341)
T ss_pred CccHHHHH-HHHhhhhhHHhHHHHHHHHHHHHHHHHhhc-cccccCCccceeeccccccceEEEEeccchhhhccccccc
Confidence 56888876 346788999999999999999999999999 9999999999998743 35889999999865432
Q ss_pred -------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccC---CCCCh
Q 018381 76 -------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE---GHFSN 145 (357)
Q Consensus 76 -------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 145 (357)
....||..|.+=-...+...+.+.|+-|+|.++.++..|..||.+..... +.+...++.+.... .....
T Consensus 172 HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~t-k~QKyEkI~EkK~s~~ie~LC~ 250 (341)
T KOG1163|consen 172 HIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAAT-KKQKYEKISEKKMSTPIEVLCK 250 (341)
T ss_pred cCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhh-HHHHHHHHHHhhcCCCHHHHhC
Confidence 34578888877666666666788999999999999999999988652211 11222222222221 11234
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccccCC
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 185 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~ 185 (357)
+.|.++...+..|-..--++-|....+.+.++.+......
T Consensus 251 G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~ 290 (341)
T KOG1163|consen 251 GFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNH 290 (341)
T ss_pred CCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccc
Confidence 5678899999999999999999998888887776655433
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.8e-16 Score=141.49 Aligned_cols=102 Identities=24% Similarity=0.333 Sum_probs=98.5
Q ss_pred HHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q 018381 253 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALF 332 (357)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 332 (357)
..+..+|..++..|+|++|+..|++||+++|. ++.+|+++|.+|+.+|++++|+.++++|++++|+++.+|+++|.+|+
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 35778899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhccccccc
Q 018381 333 GLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 333 ~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
.+|+|++|+.+|+++++++|++.
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~~ 104 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGDS 104 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999864
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.3e-16 Score=155.49 Aligned_cols=163 Identities=19% Similarity=0.226 Sum_probs=115.2
Q ss_pred chhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCccccc--CCC--C----
Q 018381 5 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS--RDG--K---- 76 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~--~~~--~---- 76 (357)
+|+|.|. .+.-+...+.+-|+.|++.||.-+|..| |+|||||.+||||+.-..+.|+||...+.. +.. .
T Consensus 106 nLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~g-VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~f 182 (1431)
T KOG1240|consen 106 NLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKLG-VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTF 182 (1431)
T ss_pred hhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHcC-ccccccccceEEEeeechhhhhcccccCCccCCCCCcccceE
Confidence 5777773 2334677788889999999999999999 999999999999999999999999876632 111 1
Q ss_pred ---ccccCCCCCCcccccc----------CC-CCccccccchHHHHHHHHhCCCCCCc-chhHhhhcCccccccccccCC
Q 018381 77 ---SYSTNLAFTPPEYLRT----------GR-VIPESVVYSFGTLLLDLLSGKHIPPS-HALDLIRGKNFLMLMDSCLEG 141 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~----------~~-~~~~~Dv~slG~~l~el~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 141 (357)
+...-.+|+|||.+.. .. .+++.||||+||++.||++-..|.+. ...=.++... ....+..+.
T Consensus 183 FFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~-~~~~e~~Le- 260 (1431)
T KOG1240|consen 183 FFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN-ADDPEQLLE- 260 (1431)
T ss_pred EEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC-ccCHHHHHH-
Confidence 1122357999997754 12 56789999999999999886544332 2111111111 111111111
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 142 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 142 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+. ...++++|..|++.||.+|.++++.++.
T Consensus 261 ~Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 261 KIE---DVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred hCc---CccHHHHHHHHHccCchhccCHHHHHHh
Confidence 111 2369999999999999999999999886
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.4e-17 Score=148.76 Aligned_cols=152 Identities=22% Similarity=0.241 Sum_probs=125.9
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCccccC
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 81 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt 81 (357)
.||.|...+. ....+++.....+...++-+++++|+.+ ++|||+|++||+++.+|.+|+.|||+++..-..+..+||
T Consensus 80 rgg~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~-iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt 156 (612)
T KOG0603|consen 80 RGGDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLG-IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGT 156 (612)
T ss_pred ccchhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhH-HHHhcccccceeecccCccccCCchhhhHhHhhhhcccc
Confidence 3566766663 5567888888899999999999999999 999999999999999999999999999977766666999
Q ss_pred CCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccC
Q 018381 82 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 161 (357)
Q Consensus 82 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~ 161 (357)
..|||||++. ....+.|-||||++.++|++|..||.......+.. .....|........+++..++..
T Consensus 157 ~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~----------~~~~~p~~l~~~a~~~~~~l~~r 224 (612)
T KOG0603|consen 157 YEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRILK----------AELEMPRELSAEARSLFRQLFKR 224 (612)
T ss_pred hhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHHhh----------hccCCchhhhHHHHHHHHHHHhh
Confidence 9999999998 56778999999999999999999987632222111 11235667788899999999999
Q ss_pred CCCCCCC
Q 018381 162 EPRERPN 168 (357)
Q Consensus 162 ~p~~Rps 168 (357)
+|..|.-
T Consensus 225 ~p~nrLg 231 (612)
T KOG0603|consen 225 NPENRLG 231 (612)
T ss_pred CHHHHhc
Confidence 9999953
|
|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.3e-16 Score=134.64 Aligned_cols=105 Identities=25% Similarity=0.326 Sum_probs=100.5
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
..+..++++|+.+|++|+|++|++||.++|..+|. ++..|.|||.+|+++++|..|..+|..|+.+|-.+.+||.++|.
T Consensus 95 ~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR~~ 173 (536)
T KOG4648|consen 95 KKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRRMQ 173 (536)
T ss_pred HhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHHHH
Confidence 44555899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+-..+|..++|.++++.+|+|.|++.
T Consensus 174 AR~~Lg~~~EAKkD~E~vL~LEP~~~ 199 (536)
T KOG4648|consen 174 ARESLGNNMEAKKDCETVLALEPKNI 199 (536)
T ss_pred HHHHHhhHHHHHHhHHHHHhhCcccH
Confidence 99999999999999999999999853
|
|
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.8e-16 Score=135.69 Aligned_cols=109 Identities=20% Similarity=0.324 Sum_probs=99.0
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCC---Cc-----------hHHHhhHHHHHHhcCChHHHHHHHHH
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM---VS-----------PTVFARRCLCYLLSDMPQEALGDAMQ 312 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~ 312 (357)
+....+...+..|+.+|+.|+|..|...|.+|+..-.. .+ ..++.|+|.||+++++|.+|+..|++
T Consensus 203 e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~k 282 (397)
T KOG0543|consen 203 ERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNK 282 (397)
T ss_pred HHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHH
Confidence 36778889999999999999999999999999863221 01 13799999999999999999999999
Q ss_pred HHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 313 al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+|.++|+|.+|+|++|.++..+|+|+.|+.+|+++++++|+|.
T Consensus 283 vLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nk 325 (397)
T KOG0543|consen 283 VLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNK 325 (397)
T ss_pred HHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcH
Confidence 9999999999999999999999999999999999999999985
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-16 Score=155.16 Aligned_cols=132 Identities=20% Similarity=0.197 Sum_probs=108.2
Q ss_pred HHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-------------------CccccCCCCCCccccc
Q 018381 31 AQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-------------------KSYSTNLAFTPPEYLR 91 (357)
Q Consensus 31 ~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------------------~~~~gt~~y~aPE~~~ 91 (357)
+.+++|||+.+ |+|||+||+|.+|..-|.+|+.|||+++..... +..+||+.|.|||++.
T Consensus 153 vla~Eylh~yg-ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVil 231 (1205)
T KOG0606|consen 153 VLAVEYLHSYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVIL 231 (1205)
T ss_pred hHHhHhhccCC-eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhh
Confidence 67999999999 999999999999999999999999998743211 1246899999999999
Q ss_pred cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCC
Q 018381 92 TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 166 (357)
Q Consensus 92 ~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 166 (357)
...|+...|=|++|+++||.+.|+.||+++..+.+-+..+...+... +-....+++.+++|.++|+.+|..|
T Consensus 232 rqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wp---E~dea~p~Ea~dli~~LL~qnp~~R 303 (1205)
T KOG0606|consen 232 RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP---EEDEALPPEAQDLIEQLLRQNPLCR 303 (1205)
T ss_pred hhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccc---ccCcCCCHHHHHHHHHHHHhChHhh
Confidence 99999999999999999999999999998855554444333322211 1234466889999999999999999
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.7e-15 Score=116.58 Aligned_cols=102 Identities=18% Similarity=0.046 Sum_probs=98.4
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
.++.+.+...|..++..|++++|...|+-+..++|. ++..|+++|.|+..+|+|++||..|.+|+.++|+++.++++.|
T Consensus 32 ~~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag 110 (157)
T PRK15363 32 TQPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAA 110 (157)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 566778889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccc
Q 018381 329 AALFGLGMNNDAQETLKDGTNLE 351 (357)
Q Consensus 329 ~~~~~lg~~~~A~~~~~~al~l~ 351 (357)
.+++.+|+.+.|.+.|+.++..-
T Consensus 111 ~c~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 111 ECYLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999765
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.4e-15 Score=133.80 Aligned_cols=97 Identities=25% Similarity=0.359 Sum_probs=92.8
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
..-+..++..|+.+|+.|+|++||++|++||+++|+ .+..|.||+.||..+|+|++.++++.+|++++|++++++++|+
T Consensus 112 ~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~RRA 190 (606)
T KOG0547|consen 112 LKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLRRA 190 (606)
T ss_pred HHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHHHH
Confidence 456788999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHH
Q 018381 329 AALFGLGMNNDAQETLKD 346 (357)
Q Consensus 329 ~~~~~lg~~~~A~~~~~~ 346 (357)
.++..+|++++|+.+.--
T Consensus 191 ~A~E~lg~~~eal~D~tv 208 (606)
T KOG0547|consen 191 SAHEQLGKFDEALFDVTV 208 (606)
T ss_pred HHHHhhccHHHHHHhhhH
Confidence 999999999999988754
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.6e-14 Score=112.59 Aligned_cols=107 Identities=13% Similarity=0.204 Sum_probs=101.8
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+.........|..++..|++++|+..|++++..+|. +..+|.++|.+++.+|++++|+..++++++++|+++..++.+
T Consensus 13 ~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l 91 (135)
T TIGR02552 13 DSEQLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHA 91 (135)
T ss_pred ChhhHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHH
Confidence 4555667788999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|.++..+|++++|++.|+++++++|++.
T Consensus 92 a~~~~~~g~~~~A~~~~~~al~~~p~~~ 119 (135)
T TIGR02552 92 AECLLALGEPESALKALDLAIEICGENP 119 (135)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999865
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.5e-14 Score=126.92 Aligned_cols=104 Identities=12% Similarity=-0.013 Sum_probs=99.6
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
..+..+...|..+...|++++|+..|+++++++|+ ++.+|+++|.++..+|++++|+..+++|++++|++..+|+++|.
T Consensus 62 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 140 (296)
T PRK11189 62 ERAQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGI 140 (296)
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34566888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+++..|++++|+++|+++++++|++
T Consensus 141 ~l~~~g~~~eA~~~~~~al~~~P~~ 165 (296)
T PRK11189 141 ALYYGGRYELAQDDLLAFYQDDPND 165 (296)
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999975
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-13 Score=115.83 Aligned_cols=108 Identities=14% Similarity=0.100 Sum_probs=101.1
Q ss_pred hHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHH-HhcCC--hHHHHHHHHHHHhhCCCChH
Q 018381 246 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCY-LLSDM--PQEALGDAMQAQVISPDWPT 322 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~-~~~~~--~~~A~~~~~~al~~~p~~~~ 322 (357)
...+.++..|...|..+...|++++|+..|+++++++|+ +..++.++|.++ ...|+ +++|+..++++++++|+++.
T Consensus 67 ~~~P~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~ 145 (198)
T PRK10370 67 RANPQNSEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVT 145 (198)
T ss_pred HHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChh
Confidence 445677888999999999999999999999999999999 999999999985 67788 59999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 323 AFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 323 a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+++.+|.+++.+|+|++|+.+|+++++++|.+
T Consensus 146 al~~LA~~~~~~g~~~~Ai~~~~~aL~l~~~~ 177 (198)
T PRK10370 146 ALMLLASDAFMQADYAQAIELWQKVLDLNSPR 177 (198)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 99999999999999999999999999998864
|
|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.4e-14 Score=125.08 Aligned_cols=106 Identities=23% Similarity=0.342 Sum_probs=99.3
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCC---CchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM---VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAF 324 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 324 (357)
++.....++..|+.+|+.|+|..|.++|..||.++|+ .++.+|.|||.+...+|+..+||.+|+.|+.|||.+.+||
T Consensus 245 ~~k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikal 324 (486)
T KOG0550|consen 245 MPKKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKAL 324 (486)
T ss_pred hHHHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHH
Confidence 5677888999999999999999999999999999997 2345899999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 325 YLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 325 ~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
.++|.++..+++|++|+++|++|++++.+
T Consensus 325 l~ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 325 LRRANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999988654
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.6e-14 Score=96.57 Aligned_cols=67 Identities=19% Similarity=0.242 Sum_probs=63.0
Q ss_pred chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCC-ChHHHHHHHHHhhcccc
Q 018381 286 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLG-MNNDAQETLKDGTNLEA 352 (357)
Q Consensus 286 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg-~~~~A~~~~~~al~l~p 352 (357)
++.+|+++|.+++..|+|++|+..+++|++++|+++.+|+++|.++..+| ++++|+++|+++++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 67889999999999999999999999999999999999999999999999 79999999999999998
|
... |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.5e-13 Score=125.23 Aligned_cols=107 Identities=13% Similarity=0.058 Sum_probs=98.6
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
-+.-+....+.|..+-++|++++|+.+|.+||++.|. -+.+|.|+|..|-.+|+..+|+..+.+||+++|.+++|+.++
T Consensus 384 ~p~~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeAhsNL 462 (966)
T KOG4626|consen 384 FPEFAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEAHSNL 462 (966)
T ss_pred ChhhhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHHHhhH
Confidence 4556667778889999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|.+|...|...+|++.|+.||+++||..
T Consensus 463 asi~kDsGni~~AI~sY~~aLklkPDfp 490 (966)
T KOG4626|consen 463 ASIYKDSGNIPEAIQSYRTALKLKPDFP 490 (966)
T ss_pred HHHhhccCCcHHHHHHHHHHHccCCCCc
Confidence 9999999999999999999999999854
|
|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.9e-13 Score=112.27 Aligned_cols=100 Identities=22% Similarity=0.335 Sum_probs=95.7
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
.-+..++++|+.+|..++|..|+.+|.+||.++|. .+.+|.|||.||+++.+++.+..++.+|++++|+.++++|.+|.
T Consensus 8 ~~a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~ 86 (284)
T KOG4642|consen 8 ESAEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQ 86 (284)
T ss_pred hHHHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHH
Confidence 34667889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcc
Q 018381 330 ALFGLGMNNDAQETLKDGTNL 350 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l 350 (357)
++.....|++|+..+.+|..+
T Consensus 87 ~~l~s~~~~eaI~~Lqra~sl 107 (284)
T KOG4642|consen 87 WLLQSKGYDEAIKVLQRAYSL 107 (284)
T ss_pred HHHhhccccHHHHHHHHHHHH
Confidence 999999999999999999654
|
|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.3e-13 Score=116.79 Aligned_cols=104 Identities=21% Similarity=0.327 Sum_probs=97.2
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhc---cCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFID---GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 326 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~---~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 326 (357)
+.+..+++.|+.+|+.++|..|+.+|+++|+ -+|+.++.+|+|||.|.+.+|+|..||.||.+|+.++|.+.++|++
T Consensus 79 E~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~Ka~~R 158 (390)
T KOG0551|consen 79 EQAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHLKAYIR 158 (390)
T ss_pred HHHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhh
Confidence 4678899999999999999999999999997 4667788999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 327 QAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 327 ~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
-|.|++.+.++++|+...+..+.++-+
T Consensus 159 ~Akc~~eLe~~~~a~nw~ee~~~~d~e 185 (390)
T KOG0551|consen 159 GAKCLLELERFAEAVNWCEEGLQIDDE 185 (390)
T ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhHH
Confidence 999999999999999999999887754
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.44 E-value=1e-12 Score=129.62 Aligned_cols=102 Identities=26% Similarity=0.382 Sum_probs=95.4
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
...+..++..|+.+++.|+|++|+..|+++|++.|+ +..|.|+|.||.++|++++|+.++++|++++|++.++|+++|
T Consensus 124 ~~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~a 201 (615)
T TIGR00990 124 KKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRRA 201 (615)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 345778999999999999999999999999999995 678999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhcccc
Q 018381 329 AALFGLGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 329 ~~~~~lg~~~~A~~~~~~al~l~p 352 (357)
.+|..+|+|++|+.+|..++.+++
T Consensus 202 ~a~~~lg~~~eA~~~~~~~~~~~~ 225 (615)
T TIGR00990 202 NAYDGLGKYADALLDLTASCIIDG 225 (615)
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCC
Confidence 999999999999999988876654
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.6e-14 Score=125.81 Aligned_cols=102 Identities=25% Similarity=0.323 Sum_probs=98.8
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
+..++.+|+.++..++|+.|+..|.+||+++|+ .+.+|.||+.++++.++|..|+.|+.+||+++|.+.++|+++|.+.
T Consensus 4 a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a~ 82 (476)
T KOG0376|consen 4 AEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTAV 82 (476)
T ss_pred hhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHHH
Confidence 566789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 018381 332 FGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+.++++.+|+.+|+....+.|+.
T Consensus 83 m~l~~~~~A~~~l~~~~~l~Pnd 105 (476)
T KOG0376|consen 83 MALGEFKKALLDLEKVKKLAPND 105 (476)
T ss_pred HhHHHHHHHHHHHHHhhhcCcCc
Confidence 99999999999999999999974
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.6e-13 Score=123.30 Aligned_cols=68 Identities=19% Similarity=0.122 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHhcCCCceeecC-CCCCeeeCCCCCeEEecCCcccccCCCC------------ccccCCCCCCcccc
Q 018381 24 VRVALYLAQALDYCSSKGRALYHDL-NTYRILFDQDGNPRLSCFGLMKNSRDGK------------SYSTNLAFTPPEYL 90 (357)
Q Consensus 24 ~~i~~~i~~~l~~lH~~~~iiH~dl-kp~Nill~~~~~~kl~Dfg~~~~~~~~~------------~~~gt~~y~aPE~~ 90 (357)
..++.|+++||.|||+.+ |+|||| ||+|||++.++.+||+|||+++...... +..+++.|++||.+
T Consensus 114 ~~~~~~i~~aL~~lH~~g-IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~ 192 (365)
T PRK09188 114 PAWFRSAHRALRDLHRAG-ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDAL 192 (365)
T ss_pred HHHHHHHHHHHHHHHHCC-CeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccC
Confidence 467899999999999999 999999 9999999999999999999998554322 23467889999998
Q ss_pred cc
Q 018381 91 RT 92 (357)
Q Consensus 91 ~~ 92 (357)
..
T Consensus 193 ~~ 194 (365)
T PRK09188 193 TP 194 (365)
T ss_pred Ch
Confidence 65
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.5e-13 Score=124.46 Aligned_cols=104 Identities=14% Similarity=0.189 Sum_probs=98.4
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
.+++...-.|..++-.|+|++|++||+.||..+|. ++.+|+.+|..+....+.++||..|.+|++|.|+++.+.|++|.
T Consensus 428 ~DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgI 506 (579)
T KOG1125|consen 428 IDPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGI 506 (579)
T ss_pred CChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhh
Confidence 44555567899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.++.+|.|++|+++|-.||.+.+..
T Consensus 507 S~mNlG~ykEA~~hlL~AL~mq~ks 531 (579)
T KOG1125|consen 507 SCMNLGAYKEAVKHLLEALSMQRKS 531 (579)
T ss_pred hhhhhhhHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999999998873
|
|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.43 E-value=7e-13 Score=109.28 Aligned_cols=123 Identities=15% Similarity=0.157 Sum_probs=104.2
Q ss_pred CCchhhHhHhhhhhhhHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhc--------cCCC---------CchHHHhhH
Q 018381 231 KDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFID--------GGTM---------VSPTVFARR 293 (357)
Q Consensus 231 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~--------~~p~---------~~~~~~~~~ 293 (357)
..++.....-|.-.-.+.+.....+...|+.+|+.|+|.+|..+|+.||- ..|. ....++.|.
T Consensus 157 e~P~qYq~e~WqlsddeKmkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy 236 (329)
T KOG0545|consen 157 EAPSQYQRETWQLSDDEKMKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNY 236 (329)
T ss_pred cCchhhccccccCCchHhhhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhH
Confidence 33343433333333356777888999999999999999999999999973 3444 033489999
Q ss_pred HHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 294 CLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 294 a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
+.|++..|+|-++++.+...+..+|++.+|||++|.++...-+..+|..+|.++|+++|.
T Consensus 237 ~QC~L~~~e~yevleh~seiL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldps 296 (329)
T KOG0545|consen 237 CQCLLKKEEYYEVLEHCSEILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPS 296 (329)
T ss_pred HHHHhhHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChh
Confidence 999999999999999999999999999999999999999999999999999999999995
|
|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.9e-13 Score=115.32 Aligned_cols=108 Identities=17% Similarity=0.219 Sum_probs=103.6
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHH
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 326 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 326 (357)
..+.++....+.|+.++..|.+..|+..|..||+.+|+ ++.+++.||.+|+.+|+-..|+.+++++|++.|++..|-..
T Consensus 33 ~~~advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQ 111 (504)
T KOG0624|consen 33 ASPADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQ 111 (504)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHH
Confidence 35677888889999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 327 QAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 327 ~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+|.+++++|++++|..+|+..|+.+|.+.
T Consensus 112 Rg~vllK~Gele~A~~DF~~vl~~~~s~~ 140 (504)
T KOG0624|consen 112 RGVVLLKQGELEQAEADFDQVLQHEPSNG 140 (504)
T ss_pred hchhhhhcccHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999999999999999754
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.1e-13 Score=113.01 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHhcCCCceeecC-CCCCeeeCCCCCeEEecCCcccccCCCCc-----------------cccCCCCC
Q 018381 24 VRVALYLAQALDYCSSKGRALYHDL-NTYRILFDQDGNPRLSCFGLMKNSRDGKS-----------------YSTNLAFT 85 (357)
Q Consensus 24 ~~i~~~i~~~l~~lH~~~~iiH~dl-kp~Nill~~~~~~kl~Dfg~~~~~~~~~~-----------------~~gt~~y~ 85 (357)
..++.|++.+|.++|+.| |+|||| ||+|||++.++.++|+|||++........ ...++.|+
T Consensus 94 ~~~~~qi~~~L~~lH~~G-IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l 172 (218)
T PRK12274 94 LAYFRAARRLLQQLHRCG-VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAAL 172 (218)
T ss_pred HHHHHHHHHHHHHHHHCc-CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 457889999999999999 999999 79999999999999999999985554331 02367788
Q ss_pred CccccccC-CCC-ccccccchHHHHHHHHhCCCCCCcc
Q 018381 86 PPEYLRTG-RVI-PESVVYSFGTLLLDLLSGKHIPPSH 121 (357)
Q Consensus 86 aPE~~~~~-~~~-~~~Dv~slG~~l~el~~g~~~~~~~ 121 (357)
.|+...-- ..+ ...+-++-|.-+|.++|+..+..++
T Consensus 173 ~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 173 TPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred CHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 88754331 223 4667789999999999999876543
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.3e-12 Score=129.61 Aligned_cols=165 Identities=15% Similarity=0.133 Sum_probs=118.8
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC-------CCCCeEEecCCccc---c
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-------QDGNPRLSCFGLMK---N 71 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~-------~~~~~kl~Dfg~~~---~ 71 (357)
+-|||.+++. ..+.++|..++.|+.|+++-++.||..+ |||+||||+|+||. ++..++|+|||-+. .
T Consensus 777 ~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~-IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~l 853 (974)
T KOG1166|consen 777 PYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG-IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKL 853 (974)
T ss_pred ccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc-eecccCCcceeEeecccCCCCcccceEEEecccceeeeE
Confidence 5699999994 6788999999999999999999999999 99999999999994 23358999999986 3
Q ss_pred cCCCCcc---ccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhH
Q 018381 72 SRDGKSY---STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 148 (357)
Q Consensus 72 ~~~~~~~---~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (357)
..++..+ .+|-.+-.+|+..|.+++.+.|.|.|.-+++-|+.|+.. . ..++ ....+...++.-+..+
T Consensus 854 fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~------q-~~~g-~~~~~~~~~~Ry~~~~-- 923 (974)
T KOG1166|consen 854 FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM------E-VKNG-SSWMVKTNFPRYWKRD-- 923 (974)
T ss_pred cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH------H-hcCC-cceeccccchhhhhHH--
Confidence 3444333 567889999999999999999999999999999999843 1 1111 1111211111111112
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 149 TELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 149 ~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
--.+|...+|..|-..=|...++...++...
T Consensus 924 -~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~ 954 (974)
T KOG1166|consen 924 -MWNKFFDLLLNPDCDTLPNLQELRTELEEVL 954 (974)
T ss_pred -HHHHHHHHHhCcCcccchhHHHHHHHHHHHH
Confidence 2345556666633333377777777666543
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.39 E-value=9.9e-14 Score=134.13 Aligned_cols=172 Identities=19% Similarity=0.186 Sum_probs=128.1
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCceeecCCCCCeeeCCCC-CeEEecCCcccccCC-CC--
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS-SKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRD-GK-- 76 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH-~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~-~~-- 76 (357)
.||++.+-+........+....-.++.|+..++.|+| ..+ +.|+||||+|.+++.++ ..|++|||++..+.. ..
T Consensus 104 ~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~-~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~ 182 (601)
T KOG0590|consen 104 DGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG-VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAE 182 (601)
T ss_pred cccccccccccCCccCCCCcchhhhhhhhccCccccCcccc-cccCCCCCccchhccCCCcccCCCchhhccccccCCcc
Confidence 4677777773222226677778889999999999999 888 99999999999999999 999999999986665 22
Q ss_pred ----cccc-CCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 77 ----SYST-NLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 77 ----~~~g-t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...| ++.|+|||...+. ...+..|+||.|+++..+++|..|+............+...... ............
T Consensus 183 ~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 261 (601)
T KOG0590|consen 183 RSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGR-FTQLPWNSISDQ 261 (601)
T ss_pred eeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccc-cccCccccCChh
Confidence 2367 9999999999874 45778999999999999999999876542222111111111111 011122345567
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..+++.+++..+|..|.+.+++...
T Consensus 262 ~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 262 AHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred hhhcccccccCCchhcccccccccc
Confidence 8889999999999999999888664
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.2e-12 Score=119.07 Aligned_cols=108 Identities=10% Similarity=0.003 Sum_probs=101.7
Q ss_pred hHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHH
Q 018381 246 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 325 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 325 (357)
.-.+..++.+.+.|+.+...|.+++|...|.++++..|. .+.+++|+|.+|.++|++++|+..|..||.++|.++++|.
T Consensus 348 ~l~p~hadam~NLgni~~E~~~~e~A~~ly~~al~v~p~-~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~fAda~~ 426 (966)
T KOG4626|consen 348 RLCPNHADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-FAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPTFADALS 426 (966)
T ss_pred HhCCccHHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-hhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCchHHHHHH
Confidence 345777888999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 326 LQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 326 ~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
++|..|-.+|+.++|+++|.+|+.++|-.
T Consensus 427 NmGnt~ke~g~v~~A~q~y~rAI~~nPt~ 455 (966)
T KOG4626|consen 427 NMGNTYKEMGDVSAAIQCYTRAIQINPTF 455 (966)
T ss_pred hcchHHHHhhhHHHHHHHHHHHHhcCcHH
Confidence 99999999999999999999999999953
|
|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.7e-12 Score=96.23 Aligned_cols=102 Identities=18% Similarity=0.157 Sum_probs=94.5
Q ss_pred HHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc---hHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC---hHHHHH
Q 018381 253 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---PTAFYL 326 (357)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~a~~~ 326 (357)
..+...|..+++.|++++|+..|.+++...|+ + ..+++.+|.++++.|++++|+..+++++..+|++ +.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (119)
T TIGR02795 3 EAYYDAALLVLKAGDYADAIQAFQAFLKKYPK-STYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALLK 81 (119)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-ccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHHH
Confidence 45678899999999999999999999999887 5 5789999999999999999999999999999885 678999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 327 QAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 327 ~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+|.++..+|++++|+..|+++++..|++.
T Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 110 (119)
T TIGR02795 82 LGMSLQELGDKEKAKATLQQVIKRYPGSS 110 (119)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHCcCCh
Confidence 99999999999999999999999999864
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.5e-13 Score=124.05 Aligned_cols=107 Identities=13% Similarity=0.092 Sum_probs=85.6
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHH
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 326 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 326 (357)
..+..++.|...|+.+--+++++.|+++|.+||.++|. .+-+|..+|.=+....+|+.|...|++||.++|.+-.|||.
T Consensus 416 ~~~~sPesWca~GNcfSLQkdh~~Aik~f~RAiQldp~-faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~rhYnAwYG 494 (638)
T KOG1126|consen 416 TDPNSPESWCALGNCFSLQKDHDTAIKCFKRAIQLDPR-FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPRHYNAWYG 494 (638)
T ss_pred hCCCCcHHHHHhcchhhhhhHHHHHHHHHHHhhccCCc-cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCchhhHHHHh
Confidence 34666788999999999999999999999999999997 77777777777777777777777777777777777777777
Q ss_pred HHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 327 QAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 327 ~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+|.+|.++++++.|.-+|++|++++|.+
T Consensus 495 lG~vy~Kqek~e~Ae~~fqkA~~INP~n 522 (638)
T KOG1126|consen 495 LGTVYLKQEKLEFAEFHFQKAVEINPSN 522 (638)
T ss_pred hhhheeccchhhHHHHHHHhhhcCCccc
Confidence 7777777777777777777777777765
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.6e-13 Score=90.71 Aligned_cols=67 Identities=21% Similarity=0.262 Sum_probs=64.4
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcC-ChHHHHHHHHHHHhhCC
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD-MPQEALGDAMQAQVISP 318 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p 318 (357)
.+..+...|..++..|+|++|+..|+++|+++|+ ++.+|+++|.++..+| ++++|++++++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 4677889999999999999999999999999999 9999999999999999 79999999999999998
|
... |
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.2e-11 Score=92.28 Aligned_cols=103 Identities=19% Similarity=0.205 Sum_probs=93.7
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCCh----HHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP----TAF 324 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~a~ 324 (357)
...+..+-.+|..+...|+.+.|++.|.++|.+.|. .+.+|+|||.++...|+.++|+.++++|+++.-+.. .+|
T Consensus 40 ~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacqa~ 118 (175)
T KOG4555|consen 40 IKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQAF 118 (175)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHHHH
Confidence 455666778899999999999999999999999999 999999999999999999999999999999876544 488
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhcccc
Q 018381 325 YLQAAALFGLGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 325 ~~~g~~~~~lg~~~~A~~~~~~al~l~p 352 (357)
..+|.+|..+|+-+.|..+|+.|.++-.
T Consensus 119 vQRg~lyRl~g~dd~AR~DFe~AA~LGS 146 (175)
T KOG4555|consen 119 VQRGLLYRLLGNDDAARADFEAAAQLGS 146 (175)
T ss_pred HHHHHHHHHhCchHHHHHhHHHHHHhCC
Confidence 9999999999999999999999987754
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.4e-12 Score=124.47 Aligned_cols=102 Identities=18% Similarity=0.181 Sum_probs=58.1
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
.+..+...|..++..|++++|+..|+++++++|. ...+|.++|.++..+|++++|+..++++++++|+++.+|+.+|.+
T Consensus 330 ~a~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~ 408 (615)
T TIGR00990 330 EAIALNLRGTFKCLKGKHLEALADLSKSIELDPR-VTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQL 408 (615)
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3344455555555555555555555555555555 555555555555555555555555555555555555555555555
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
++.+|++++|+.+|+++++++|+
T Consensus 409 ~~~~g~~~~A~~~~~kal~l~P~ 431 (615)
T TIGR00990 409 HFIKGEFAQAGKDYQKSIDLDPD 431 (615)
T ss_pred HHHcCCHHHHHHHHHHHHHcCcc
Confidence 55555555555555555555554
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.36 E-value=8e-13 Score=110.15 Aligned_cols=68 Identities=13% Similarity=0.195 Sum_probs=57.0
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYC-SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 73 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~l-H~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 73 (357)
+|++|...+. ..+.+++.++..++.|++.+|.++ |+.+ |+||||||+|||++ ++.++|+|||++....
T Consensus 100 ~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~g-iiHrDlkP~NIli~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 100 GDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCR-LVHADLSEYNLLYH-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEE-CCcEEEEEccccccCC
Confidence 4555554432 356899999999999999999999 6888 99999999999998 5789999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.4e-12 Score=102.43 Aligned_cols=107 Identities=15% Similarity=0.058 Sum_probs=70.5
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHh--hCCCChHHH
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQV--ISPDWPTAF 324 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~a~ 324 (357)
.+|.....+...|..+.+.|+.+.|-+.|++|+.++|+ +..+++|.|.-++..|+|++|...+++|+. ..|..+..|
T Consensus 64 ~DPs~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~ 142 (250)
T COG3063 64 HDPSYYLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFERALADPAYGEPSDTL 142 (250)
T ss_pred hCcccHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHHHHhCCCCCCcchhh
Confidence 34555556666666666666666666666666666666 666666666666666666666666666665 334555666
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 325 YLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 325 ~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
-++|.|.++.|+.+.|..+|+++|++||++
T Consensus 143 eN~G~Cal~~gq~~~A~~~l~raL~~dp~~ 172 (250)
T COG3063 143 ENLGLCALKAGQFDQAEEYLKRALELDPQF 172 (250)
T ss_pred hhhHHHHhhcCCchhHHHHHHHHHHhCcCC
Confidence 666666666677777777777777666654
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.9e-13 Score=113.58 Aligned_cols=168 Identities=17% Similarity=0.201 Sum_probs=117.5
Q ss_pred CCCCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-ceeecCCCCCeeeCCCCCeEEecCCccc--ccC--
Q 018381 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGR-ALYHDLNTYRILFDQDGNPRLSCFGLMK--NSR-- 73 (357)
Q Consensus 1 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-iiH~dlkp~Nill~~~~~~kl~Dfg~~~--~~~-- 73 (357)
|.-|+|..+|.+ ++...+......+|+-||++||.|||+..| |+|+++..+-|++..+|.+|+.----.. ...
T Consensus 154 mssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~ 233 (458)
T KOG1266|consen 154 MSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNS 233 (458)
T ss_pred ccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccchhhhh
Confidence 567899999963 456778899999999999999999999764 8999999999999999988875421111 000
Q ss_pred ----CCCccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHH
Q 018381 74 ----DGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 149 (357)
Q Consensus 74 ----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
......+-++|.+||.-...+.+..+|||+||+..++|..|..-+............+...+ +. ....
T Consensus 234 ~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i---~~-----len~ 305 (458)
T KOG1266|consen 234 TREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVI---IG-----LENG 305 (458)
T ss_pred hhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhhe---ee-----ccCc
Confidence 01122356889999988777778899999999999999988743222111100001110000 00 0112
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
.-+.+|.+|+.-.|+.||+|+.++-|.
T Consensus 306 lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 306 LQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred cccCcCcccccCCCCCCcchhhhhcCc
Confidence 235678999999999999999998774
|
|
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.6e-12 Score=93.34 Aligned_cols=82 Identities=21% Similarity=0.361 Sum_probs=74.4
Q ss_pred cCChhHHHHHHHHHhccCCCC-chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHH
Q 018381 265 AKDFPTAIECYTHFIDGGTMV-SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQET 343 (357)
Q Consensus 265 ~~~~~~A~~~~~~ai~~~p~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~ 343 (357)
.|+|++|+..|+++++.+|.. +...++++|.||+++|+|++|+..+++ +..+|.++..++.+|.+++.+|+|++|++.
T Consensus 2 ~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~~ 80 (84)
T PF12895_consen 2 QGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIKA 80 (84)
T ss_dssp TT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHHH
T ss_pred CccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHHH
Confidence 689999999999999999951 466788899999999999999999999 999999999999999999999999999999
Q ss_pred HHHh
Q 018381 344 LKDG 347 (357)
Q Consensus 344 ~~~a 347 (357)
|+++
T Consensus 81 l~~~ 84 (84)
T PF12895_consen 81 LEKA 84 (84)
T ss_dssp HHHH
T ss_pred HhcC
Confidence 9875
|
|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.3e-11 Score=101.49 Aligned_cols=107 Identities=19% Similarity=0.183 Sum_probs=97.2
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCC--chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 325 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 325 (357)
....+..+...|..+...|++++|+.+|+++++..|+. ...++.++|.++..+|++++|+..+++++.++|++..++.
T Consensus 31 ~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 110 (172)
T PRK02603 31 KAKEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSALN 110 (172)
T ss_pred HhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 34566678899999999999999999999999887651 2468999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCC--------------hHHHHHHHHHhhcccccc
Q 018381 326 LQAAALFGLGM--------------NNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 326 ~~g~~~~~lg~--------------~~~A~~~~~~al~l~p~~ 354 (357)
.+|.++..+|+ +++|++.++++++++|++
T Consensus 111 ~lg~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~ 153 (172)
T PRK02603 111 NIAVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNN 153 (172)
T ss_pred HHHHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchh
Confidence 99999999998 789999999999999985
|
|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.33 E-value=1e-11 Score=90.27 Aligned_cols=98 Identities=21% Similarity=0.324 Sum_probs=93.6
Q ss_pred HHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhC
Q 018381 255 SKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGL 334 (357)
Q Consensus 255 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~l 334 (357)
+...|..++..|++++|+..+.++++..|. +..+++.+|.++...+++++|+..+++++.+.|.+..+++.+|.++...
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (100)
T cd00189 3 LLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYKL 81 (100)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHH
Confidence 567788999999999999999999999999 8899999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhhccccc
Q 018381 335 GMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 335 g~~~~A~~~~~~al~l~p~ 353 (357)
|++++|...++++++++|+
T Consensus 82 ~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 82 GKYEEALEAYEKALELDPN 100 (100)
T ss_pred HhHHHHHHHHHHHHccCCC
Confidence 9999999999999999874
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.3e-11 Score=125.34 Aligned_cols=103 Identities=12% Similarity=-0.080 Sum_probs=99.1
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
...+...|..+.+.|++++|+..|+++++++|+ ++.+++++|.++...|++++|+..+++|++++|+++.+++++|.++
T Consensus 609 ~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~al 687 (987)
T PRK09782 609 ANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYVN 687 (987)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 566788899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 018381 332 FGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
..+|++++|+.+|+++++++|++.
T Consensus 688 ~~lGd~~eA~~~l~~Al~l~P~~a 711 (987)
T PRK09782 688 QRLDDMAATQHYARLVIDDIDNQA 711 (987)
T ss_pred HHCCCHHHHHHHHHHHHhcCCCCc
Confidence 999999999999999999999863
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.5e-12 Score=107.50 Aligned_cols=58 Identities=17% Similarity=0.262 Sum_probs=52.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeecCCCCCeeeCCCCCeEEecCCcccccCC
Q 018381 15 NQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 74 (357)
Q Consensus 15 ~~~l~~~~~~~i~~~i~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 74 (357)
...++..++..++.|++.++.++|+ .+ |+||||||+||+++ ++.++|+|||+++....
T Consensus 111 ~~~~~~~~~~~i~~~l~~~l~~lH~~~g-ivHrDlkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 111 DVPLEEEEAEELYEQVVEQMRRLYQEAG-LVHGDLSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred hccCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence 4568889999999999999999999 88 99999999999999 88999999999876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.6e-13 Score=111.64 Aligned_cols=76 Identities=12% Similarity=0.100 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCccccCCCCCCccccccCCCCccccccchH
Q 018381 26 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFG 105 (357)
Q Consensus 26 i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG 105 (357)
...+++.++..||+.+ ++|||+||+||+++.+| ++|+|||..+........ ..++....+..++|+||||
T Consensus 140 ~~~~i~~~l~~lH~~g-i~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~--------d~~vler~y~~~~di~~lg 209 (232)
T PRK10359 140 VKAKIKASIESLHQHG-MVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLG 209 (232)
T ss_pred HHHHHHHHHHHHHHcC-CccCCCChHHEEEeCCC-EEEEECCCcccccchhhH--------HHHHHHhHhccccccccee
Confidence 4669999999999999 99999999999999988 999999987655322211 0133334566789999999
Q ss_pred HHHHHH
Q 018381 106 TLLLDL 111 (357)
Q Consensus 106 ~~l~el 111 (357)
+++.-+
T Consensus 210 ~~~~~~ 215 (232)
T PRK10359 210 YYLLIY 215 (232)
T ss_pred EeehHH
Confidence 987755
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-11 Score=119.87 Aligned_cols=88 Identities=17% Similarity=0.084 Sum_probs=64.6
Q ss_pred CChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHH
Q 018381 266 KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 345 (357)
Q Consensus 266 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~ 345 (357)
+++++|+..+++|++++|+ ++.+|..+|.++...|++++|+..+++|++++|+++.+|+.+|.++..+|++++|+..|+
T Consensus 318 ~~~~~A~~~~~~Al~ldP~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~G~~~eAi~~~~ 396 (553)
T PRK12370 318 NAMIKAKEHAIKATELDHN-NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTIN 396 (553)
T ss_pred hHHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 4467777777777777777 777777777777777777777777777777777777777777777777777777777777
Q ss_pred Hhhcccccc
Q 018381 346 DGTNLEAKK 354 (357)
Q Consensus 346 ~al~l~p~~ 354 (357)
++++++|++
T Consensus 397 ~Al~l~P~~ 405 (553)
T PRK12370 397 ECLKLDPTR 405 (553)
T ss_pred HHHhcCCCC
Confidence 777777764
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.8e-11 Score=98.27 Aligned_cols=106 Identities=18% Similarity=0.110 Sum_probs=92.1
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCC--CchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM--VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 326 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 326 (357)
...+..+...|..++..|++++|+..|++++.+.|+ ..+.+|+++|.++...|++++|+..+++|+.++|.+..++..
T Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~~ 111 (168)
T CHL00033 32 EKEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALNN 111 (168)
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHH
Confidence 445677788899999999999999999999988665 124589999999999999999999999999999999999999
Q ss_pred HHHHHH-------hCCChH-------HHHHHHHHhhcccccc
Q 018381 327 QAAALF-------GLGMNN-------DAQETLKDGTNLEAKK 354 (357)
Q Consensus 327 ~g~~~~-------~lg~~~-------~A~~~~~~al~l~p~~ 354 (357)
+|.++. .+|+++ +|+..|++++.++|++
T Consensus 112 la~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~ 153 (168)
T CHL00033 112 MAVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGN 153 (168)
T ss_pred HHHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 999999 777876 6666777788888864
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-11 Score=111.00 Aligned_cols=103 Identities=17% Similarity=0.230 Sum_probs=97.4
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
+..+...|.-+|-.|++-.|-..++++|+++|. +...|..||.+|....+.++-..++.+|..+||.++..||.||+.+
T Consensus 326 A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm~ 404 (606)
T KOG0547|consen 326 AEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQMR 404 (606)
T ss_pred HHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHHH
Confidence 667888899999999999999999999999999 8888999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 018381 332 FGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+.+++|++|+.+|++|+.|+|++.
T Consensus 405 flL~q~e~A~aDF~Kai~L~pe~~ 428 (606)
T KOG0547|consen 405 FLLQQYEEAIADFQKAISLDPENA 428 (606)
T ss_pred HHHHHHHHHHHHHHHHhhcChhhh
Confidence 999999999999999999999863
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.9e-11 Score=97.53 Aligned_cols=103 Identities=11% Similarity=0.036 Sum_probs=96.9
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
...+......|..++..|++..|...+++||+.+|+ ++.+|.-||.+|...|+.+.|-+.|++|+.++|++.+.+++.|
T Consensus 32 ~~aa~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG 110 (250)
T COG3063 32 NEAAKARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYG 110 (250)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhh
Confidence 345666778999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccc
Q 018381 329 AALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 329 ~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
.-++..|+|++|.+.|++|+. +|.
T Consensus 111 ~FLC~qg~~~eA~q~F~~Al~-~P~ 134 (250)
T COG3063 111 AFLCAQGRPEEAMQQFERALA-DPA 134 (250)
T ss_pred HHHHhCCChHHHHHHHHHHHh-CCC
Confidence 999999999999999999986 554
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=7.4e-11 Score=115.64 Aligned_cols=107 Identities=8% Similarity=-0.077 Sum_probs=92.7
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHH
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 326 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 326 (357)
.-+.++..+...|......|.+++|+..++.++++.|+ +..++.+++.++.+++++++|+..+++++..+|+++.+++.
T Consensus 81 ~~~~~~~~~~~La~i~~~~g~~~ea~~~l~~~~~~~Pd-~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~~~~~~~~ 159 (694)
T PRK15179 81 RYPHTELFQVLVARALEAAHRSDEGLAVWRGIHQRFPD-SSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSSSAREILL 159 (694)
T ss_pred hccccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCCCHHHHHH
Confidence 34566777888888888889999999999999999998 88888999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 327 QAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 327 ~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+|.++.++|+|++|+..|+++++.+|+.
T Consensus 160 ~a~~l~~~g~~~~A~~~y~~~~~~~p~~ 187 (694)
T PRK15179 160 EAKSWDEIGQSEQADACFERLSRQHPEF 187 (694)
T ss_pred HHHHHHHhcchHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999888877764
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.4e-11 Score=83.67 Aligned_cols=63 Identities=22% Similarity=0.262 Sum_probs=43.8
Q ss_pred hHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 292 RRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 292 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.+|..++..|+|++|+..++++++.+|+++.+++.+|.+++.+|++++|+..|+++++++|++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 456667777777777777777777777777777777777777777777777777777777764
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.3e-11 Score=93.73 Aligned_cols=100 Identities=7% Similarity=-0.067 Sum_probs=95.8
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
.+..+.+...|..++..|++++|...|+-...++|. ++..|..+|.|+..+++|++|+..|..|..++++++..+|+.|
T Consensus 34 ~~~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~ag 112 (165)
T PRK15331 34 QDMMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTG 112 (165)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHH
Confidence 455677788999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhc
Q 018381 329 AALFGLGMNNDAQETLKDGTN 349 (357)
Q Consensus 329 ~~~~~lg~~~~A~~~~~~al~ 349 (357)
.+++.+|+.+.|+.+|+.+++
T Consensus 113 qC~l~l~~~~~A~~~f~~a~~ 133 (165)
T PRK15331 113 QCQLLMRKAAKARQCFELVNE 133 (165)
T ss_pred HHHHHhCCHHHHHHHHHHHHh
Confidence 999999999999999999987
|
|
| >KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.1e-11 Score=105.54 Aligned_cols=107 Identities=23% Similarity=0.297 Sum_probs=102.4
Q ss_pred hHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHH
Q 018381 246 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 325 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 325 (357)
.+..+.+.+.+-+|..++..|++++|++.|..+|+++|. .+.+|.+|+.+++++++...||++|+.|++++|+.++.|-
T Consensus 108 ee~~eqa~e~k~~A~eAln~G~~~~ai~~~t~ai~lnp~-~a~l~~kr~sv~lkl~kp~~airD~d~A~ein~Dsa~~yk 186 (377)
T KOG1308|consen 108 EEMMDQANDKKVQASEALNDGEFDTAIELFTSAIELNPP-LAILYAKRASVFLKLKKPNAAIRDCDFAIEINPDSAKGYK 186 (377)
T ss_pred HHHHHHHHHHHHHHHHHhcCcchhhhhcccccccccCCc-hhhhcccccceeeeccCCchhhhhhhhhhccCcccccccc
Confidence 456777888999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 326 LQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 326 ~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
.+|.+...+|++++|..+|+.++++|-+
T Consensus 187 frg~A~rllg~~e~aa~dl~~a~kld~d 214 (377)
T KOG1308|consen 187 FRGYAERLLGNWEEAAHDLALACKLDYD 214 (377)
T ss_pred hhhHHHHHhhchHHHHHHHHHHHhcccc
Confidence 9999999999999999999999998765
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.1e-11 Score=95.86 Aligned_cols=90 Identities=16% Similarity=0.037 Sum_probs=83.4
Q ss_pred hhHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHH
Q 018381 245 WTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAF 324 (357)
Q Consensus 245 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 324 (357)
+...+.....+...|..+...|++++|+..|+++++++|. ++.+++++|.|+..+|++++|+..+++|++++|+++.++
T Consensus 51 l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~-~~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~~~~ 129 (144)
T PRK15359 51 VMAQPWSWRAHIALAGTWMMLKEYTTAINFYGHALMLDAS-HPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWS 129 (144)
T ss_pred HHcCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 3445677888899999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCC
Q 018381 325 YLQAAALFGLG 335 (357)
Q Consensus 325 ~~~g~~~~~lg 335 (357)
..+|.+...++
T Consensus 130 ~~~~~~~~~l~ 140 (144)
T PRK15359 130 EIRQNAQIMVD 140 (144)
T ss_pred HHHHHHHHHHH
Confidence 99999876543
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.8e-11 Score=115.99 Aligned_cols=103 Identities=9% Similarity=-0.074 Sum_probs=95.4
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+.++..+...|..+...|++++|+..|++|++++|+ ++.+|+++|.++..+|++++|+..+++|++++|.++.+++.+
T Consensus 334 dP~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~ 412 (553)
T PRK12370 334 DHNNPQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITK 412 (553)
T ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHH
Confidence 4556667778899999999999999999999999999 999999999999999999999999999999999999988888
Q ss_pred HHHHHhCCChHHHHHHHHHhhccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLE 351 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~ 351 (357)
+.+++.+|++++|+..++++++..
T Consensus 413 ~~~~~~~g~~eeA~~~~~~~l~~~ 436 (553)
T PRK12370 413 LWITYYHTGIDDAIRLGDELRSQH 436 (553)
T ss_pred HHHHHhccCHHHHHHHHHHHHHhc
Confidence 888999999999999999999775
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.24 E-value=8.1e-12 Score=116.40 Aligned_cols=104 Identities=13% Similarity=0.106 Sum_probs=93.5
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
..+-++-.+|.++....+|+.|..+|++||..+|. ++.+||.+|.+|+++++++.|..++.+|++++|.+.......|.
T Consensus 453 ~faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~r-hYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~nsvi~~~~g~ 531 (638)
T KOG1126|consen 453 RFAYAYTLLGHESIATEEFDKAMKSFRKALGVDPR-HYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPSNSVILCHIGR 531 (638)
T ss_pred ccchhhhhcCChhhhhHHHHhHHHHHHhhhcCCch-hhHHHHhhhhheeccchhhHHHHHHHhhhcCCccchhHHhhhhH
Confidence 34445566788888889999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
++.++|+.++|+..|++|+.+||.+
T Consensus 532 ~~~~~k~~d~AL~~~~~A~~ld~kn 556 (638)
T KOG1126|consen 532 IQHQLKRKDKALQLYEKAIHLDPKN 556 (638)
T ss_pred HHHHhhhhhHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999975
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.5e-10 Score=102.35 Aligned_cols=112 Identities=9% Similarity=-0.048 Sum_probs=103.2
Q ss_pred hhhhHHHHHhHHHHHhhhHHhhcC-ChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCCh--HHHHHHHHHHHhhCCC
Q 018381 243 QMWTDQIQETLNSKKRGDAAFRAK-DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMP--QEALGDAMQAQVISPD 319 (357)
Q Consensus 243 ~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~--~~A~~~~~~al~~~p~ 319 (357)
....-.+.....+..+|..+...| ++++|+..++++++.+|+ +..+|++|+.++.++|+. ++++..++++|+++|+
T Consensus 62 ~aI~lnP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk-nyqaW~~R~~~l~~l~~~~~~~el~~~~kal~~dpk 140 (320)
T PLN02789 62 DVIRLNPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK-NYQIWHHRRWLAEKLGPDAANKELEFTRKILSLDAK 140 (320)
T ss_pred HHHHHCchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc-chHHhHHHHHHHHHcCchhhHHHHHHHHHHHHhCcc
Confidence 444556778888999999999888 689999999999999999 999999999999999874 7889999999999999
Q ss_pred ChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 320 WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 320 ~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+..+|+.+|.++..+|+|++|++++.++|++||+|.
T Consensus 141 Ny~AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~ 176 (320)
T PLN02789 141 NYHAWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNN 176 (320)
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCch
Confidence 999999999999999999999999999999999874
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.1e-11 Score=98.91 Aligned_cols=91 Identities=15% Similarity=0.148 Sum_probs=85.8
Q ss_pred hcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH-HhCCC--hHHH
Q 018381 264 RAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL-FGLGM--NNDA 340 (357)
Q Consensus 264 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~-~~lg~--~~~A 340 (357)
..++.++++..++++++.+|+ +..+|.++|.+|..+|++++|+..+++|++++|+++.+++.+|.++ +..|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 367889999999999999999 9999999999999999999999999999999999999999999986 67788 5999
Q ss_pred HHHHHHhhccccccc
Q 018381 341 QETLKDGTNLEAKKH 355 (357)
Q Consensus 341 ~~~~~~al~l~p~~~ 355 (357)
.+.++++++++|++.
T Consensus 130 ~~~l~~al~~dP~~~ 144 (198)
T PRK10370 130 REMIDKALALDANEV 144 (198)
T ss_pred HHHHHHHHHhCCCCh
Confidence 999999999999864
|
|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.3e-11 Score=105.78 Aligned_cols=104 Identities=16% Similarity=0.050 Sum_probs=98.1
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+.-...|.-.|.+++..++-..|++.|++||+++|. +..+|+.+|.+|..++.+.=|+-++++|+++.|++...|..+
T Consensus 360 Np~~~~aWTLmGHEyvEmKNt~AAi~sYRrAvdi~p~-DyRAWYGLGQaYeim~Mh~YaLyYfqkA~~~kPnDsRlw~aL 438 (559)
T KOG1155|consen 360 NPKYLSAWTLMGHEYVEMKNTHAAIESYRRAVDINPR-DYRAWYGLGQAYEIMKMHFYALYYFQKALELKPNDSRLWVAL 438 (559)
T ss_pred CcchhHHHHHhhHHHHHhcccHHHHHHHHHHHhcCch-hHHHHhhhhHHHHHhcchHHHHHHHHHHHhcCCCchHHHHHH
Confidence 4566677888899999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p 352 (357)
|.+|.++++.++|+++|++|+...-
T Consensus 439 G~CY~kl~~~~eAiKCykrai~~~d 463 (559)
T KOG1155|consen 439 GECYEKLNRLEEAIKCYKRAILLGD 463 (559)
T ss_pred HHHHHHhccHHHHHHHHHHHHhccc
Confidence 9999999999999999999997753
|
|
| >COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.3e-10 Score=97.40 Aligned_cols=104 Identities=15% Similarity=0.020 Sum_probs=96.3
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
+.+...+..+|...++.|+|.+|+..++++..++|+ +..+|+.+|.+|.+.|++++|...|.+|+++.|+.+.+..++|
T Consensus 97 ~~d~~ll~~~gk~~~~~g~~~~A~~~~rkA~~l~p~-d~~~~~~lgaaldq~Gr~~~Ar~ay~qAl~L~~~~p~~~nNlg 175 (257)
T COG5010 97 PKDRELLAAQGKNQIRNGNFGEAVSVLRKAARLAPT-DWEAWNLLGAALDQLGRFDEARRAYRQALELAPNEPSIANNLG 175 (257)
T ss_pred cccHHHHHHHHHHHHHhcchHHHHHHHHHHhccCCC-ChhhhhHHHHHHHHccChhHHHHHHHHHHHhccCCchhhhhHH
Confidence 344445566999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccc
Q 018381 329 AALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 329 ~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
..|+..|+++.|...+..+...-+.
T Consensus 176 ms~~L~gd~~~A~~lll~a~l~~~a 200 (257)
T COG5010 176 MSLLLRGDLEDAETLLLPAYLSPAA 200 (257)
T ss_pred HHHHHcCCHHHHHHHHHHHHhCCCC
Confidence 9999999999999999998766553
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.4e-11 Score=80.14 Aligned_cols=64 Identities=19% Similarity=0.220 Sum_probs=60.1
Q ss_pred HhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCCh
Q 018381 257 KRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP 321 (357)
Q Consensus 257 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 321 (357)
..|..+++.|+|++|+..|+++++..|. +..+++.+|.++..+|++++|+..++++++++|+++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p 65 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPD-NPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP 65 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTT-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 5788999999999999999999999999 999999999999999999999999999999999985
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.4e-10 Score=100.36 Aligned_cols=105 Identities=17% Similarity=0.224 Sum_probs=96.6
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCch---HHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChH---H
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP---TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT---A 323 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---a 323 (357)
..+..+...|..++..|+|++|+..|++++...|. ++ .+++++|.+++..|++++|+..++++++.+|+++. +
T Consensus 31 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 109 (235)
T TIGR03302 31 WPAEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYA 109 (235)
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHHH
Confidence 44567789999999999999999999999999998 65 58899999999999999999999999999998887 7
Q ss_pred HHHHHHHHHhC--------CChHHHHHHHHHhhccccccc
Q 018381 324 FYLQAAALFGL--------GMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 324 ~~~~g~~~~~l--------g~~~~A~~~~~~al~l~p~~~ 355 (357)
++.+|.+++.+ |++++|++.|+++++.+|++.
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 149 (235)
T TIGR03302 110 YYLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNSE 149 (235)
T ss_pred HHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCCh
Confidence 99999999987 899999999999999999863
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.5e-10 Score=111.94 Aligned_cols=126 Identities=12% Similarity=0.034 Sum_probs=110.0
Q ss_pred HHHHhhcCCCchhhHhHhhhhhhhHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCC
Q 018381 223 EILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM 302 (357)
Q Consensus 223 ~il~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~ 302 (357)
.+....+.-++. ..+......-.|+........|..+.+.+++++|+..+++++..+|+ ++.+++++|.++.++|+
T Consensus 94 ~i~~~~g~~~ea---~~~l~~~~~~~Pd~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~-~~~~~~~~a~~l~~~g~ 169 (694)
T PRK15179 94 RALEAAHRSDEG---LAVWRGIHQRFPDSSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSS-SAREILLEAKSWDEIGQ 169 (694)
T ss_pred HHHHHcCCcHHH---HHHHHHHHhhCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHHhcc
Confidence 444444444333 23334444557888889999999999999999999999999999999 99999999999999999
Q ss_pred hHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 018381 303 PQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 303 ~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p 352 (357)
|++|+..|++++..+|+++.++..+|.++..+|+.++|...|++|+++.-
T Consensus 170 ~~~A~~~y~~~~~~~p~~~~~~~~~a~~l~~~G~~~~A~~~~~~a~~~~~ 219 (694)
T PRK15179 170 SEQADACFERLSRQHPEFENGYVGWAQSLTRRGALWRARDVLQAGLDAIG 219 (694)
T ss_pred hHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999997643
|
|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.8e-10 Score=95.91 Aligned_cols=107 Identities=9% Similarity=0.021 Sum_probs=96.3
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhC--CCChHHH
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS--PDWPTAF 324 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--p~~~~a~ 324 (357)
..+.....+...|..++..|++++|+..|+++++..|. +..++.++|.++...|++++|+..+++++... +.....+
T Consensus 60 ~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~ 138 (234)
T TIGR02521 60 HDPDDYLAYLALALYYQQLGELEKAEDSFRRALTLNPN-NGDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQPARSL 138 (234)
T ss_pred hCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccccchHHH
Confidence 34556677788899999999999999999999999999 99999999999999999999999999999854 5677889
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 325 YLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 325 ~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+.+|.++...|++++|...|+++++.+|++
T Consensus 139 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 168 (234)
T TIGR02521 139 ENAGLCALKAGDFDKAEKYLTRALQIDPQR 168 (234)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 999999999999999999999999999875
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >PRK10803 tol-pal system protein YbgF; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.9e-10 Score=98.15 Aligned_cols=100 Identities=11% Similarity=-0.025 Sum_probs=90.3
Q ss_pred HHHhhhHH-hhcCChhHHHHHHHHHhccCCCCc---hHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC---ChHHHHHH
Q 018381 255 SKKRGDAA-FRAKDFPTAIECYTHFIDGGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVISPD---WPTAFYLQ 327 (357)
Q Consensus 255 ~~~~g~~~-~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---~~~a~~~~ 327 (357)
....|..+ ++.|+|++|+..|++.++..|+ + +.+++.+|.+|+..|++++|+..|.+++...|+ .+++++.+
T Consensus 145 ~Y~~A~~l~~~~~~y~~Ai~af~~fl~~yP~-s~~a~~A~y~LG~~y~~~g~~~~A~~~f~~vv~~yP~s~~~~dAl~kl 223 (263)
T PRK10803 145 DYNAAIALVQDKSRQDDAIVAFQNFVKKYPD-STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKV 223 (263)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCcchhHHHHHH
Confidence 34556655 5679999999999999999998 6 479999999999999999999999999998887 67899999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|.++..+|++++|...|+++++..|+..
T Consensus 224 g~~~~~~g~~~~A~~~~~~vi~~yP~s~ 251 (263)
T PRK10803 224 GVIMQDKGDTAKAKAVYQQVIKKYPGTD 251 (263)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCcCCH
Confidence 9999999999999999999999999753
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.2e-10 Score=102.49 Aligned_cols=90 Identities=16% Similarity=0.104 Sum_probs=82.6
Q ss_pred CChhHHHHHHHHHhc---cCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHH
Q 018381 266 KDFPTAIECYTHFID---GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQE 342 (357)
Q Consensus 266 ~~~~~A~~~~~~ai~---~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~ 342 (357)
+..+.++..++++|. ++|...+..|+++|.+|..+|++++|+.++++|++++|+++.+|+.+|.++..+|++++|+.
T Consensus 40 ~~~e~~i~~~~~~l~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~A~~ 119 (296)
T PRK11189 40 LQQEVILARLNQILASRDLTDEERAQLHYERGVLYDSLGLRALARNDFSQALALRPDMADAYNYLGIYLTQAGNFDAAYE 119 (296)
T ss_pred hHHHHHHHHHHHHHccccCCcHhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCHHHHHH
Confidence 467789999999996 55553578899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccccc
Q 018381 343 TLKDGTNLEAKKH 355 (357)
Q Consensus 343 ~~~~al~l~p~~~ 355 (357)
.|+++++++|++.
T Consensus 120 ~~~~Al~l~P~~~ 132 (296)
T PRK11189 120 AFDSVLELDPTYN 132 (296)
T ss_pred HHHHHHHhCCCCH
Confidence 9999999999863
|
|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.4e-10 Score=111.99 Aligned_cols=106 Identities=16% Similarity=0.009 Sum_probs=80.8
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.|..+..+...|..+...|++++|+..|+++++++|+ ++.++.++|.++...|++++|+..++++++.+|+++.+++.+
T Consensus 280 ~P~~~~a~~~lg~~l~~~g~~~eA~~~l~~al~l~P~-~~~a~~~La~~l~~~G~~~eA~~~l~~al~~~P~~~~~~~~~ 358 (656)
T PRK15174 280 NSDNVRIVTLYADALIRTGQNEKAIPLLQQSLATHPD-LPYVRAMYARALRQVGQYTAASDEFVQLAREKGVTSKWNRYA 358 (656)
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccchHHHHHH
Confidence 3445556667777777777888888888888777777 777777777777777888888888877777777777767777
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
|.++..+|++++|+..|+++++.+|++
T Consensus 359 a~al~~~G~~deA~~~l~~al~~~P~~ 385 (656)
T PRK15174 359 AAALLQAGKTSEAESVFEHYIQARASH 385 (656)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhChhh
Confidence 777777788888888888877777764
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.4e-11 Score=100.23 Aligned_cols=61 Identities=18% Similarity=0.081 Sum_probs=49.1
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHH-HHHhcCCCceeecCCCCCeeeCC----CCCeEEecCCc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQAL-DYCSSKGRALYHDLNTYRILFDQ----DGNPRLSCFGL 68 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l-~~lH~~~~iiH~dlkp~Nill~~----~~~~kl~Dfg~ 68 (357)
++|||.+++. +..+++. ..++.|++.++ .|||+.+ |+||||||+|||++. ++.++|+||+.
T Consensus 90 ~~~tL~~~l~---~~~~~e~--~~~~~~~L~~l~~yLh~~~-IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 90 PSITLTEFAE---QCRYEED--VAQLRQLLKKLKRYLLDNR-IVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred cchhHHHHHH---cccccHh--HHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 4689999993 2346666 35688888888 9999999 999999999999974 34799999543
|
|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.12 E-value=9.3e-10 Score=94.11 Aligned_cols=103 Identities=16% Similarity=0.147 Sum_probs=92.6
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccC--CCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGG--TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~--p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
....+...|..++..|++++|+..|.++++.. +. ....+.++|.++...|++++|+..++++++.+|+++.+++.+|
T Consensus 98 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la 176 (234)
T TIGR02521 98 NGDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQ-PARSLENAGLCALKAGDFDKAEKYLTRALQIDPQRPESLLELA 176 (234)
T ss_pred CHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCChHHHHHHH
Confidence 34556777889999999999999999999854 44 6678999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccc
Q 018381 329 AALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 329 ~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.+++..|++++|+..+++++++.|.+
T Consensus 177 ~~~~~~~~~~~A~~~~~~~~~~~~~~ 202 (234)
T TIGR02521 177 ELYYLRGQYKDARAYLERYQQTYNQT 202 (234)
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999886653
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.12 E-value=8.8e-11 Score=101.30 Aligned_cols=70 Identities=13% Similarity=0.113 Sum_probs=57.5
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 74 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 74 (357)
+|++|..+.. ....+...++..++.||+.++.+||+.+.++||||||+||+++ ++.++|+|||.+.....
T Consensus 131 ~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 131 GGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred cCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence 5666666542 3445677778899999999999999997799999999999999 88999999998775443
|
|
| >PLN03098 LPA1 LOW PSII ACCUMULATION1; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.3e-10 Score=103.92 Aligned_cols=68 Identities=9% Similarity=0.098 Sum_probs=57.2
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchH---HHhhHHHHHHhcCChHHHHHHHHHHHhh
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQEALGDAMQAQVI 316 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~---~~~~~a~~~~~~~~~~~A~~~~~~al~~ 316 (357)
+++.+..+.+.|..+++.|+|++|+..|++||+++|+ ++. +|+|+|.||..+|++++|+.++++|+++
T Consensus 71 dP~~a~a~~NLG~AL~~lGryeEAIa~f~rALeL~Pd-~aeA~~A~yNLAcaya~LGr~dEAla~LrrALel 141 (453)
T PLN03098 71 DVKTAEDAVNLGLSLFSKGRVKDALAQFETALELNPN-PDEAQAAYYNKACCHAYREEGKKAADCLRTALRD 141 (453)
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 6777888888888888888888888888888888888 774 4888888888888888888888888887
|
|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=8e-10 Score=109.37 Aligned_cols=114 Identities=10% Similarity=-0.044 Sum_probs=100.1
Q ss_pred hhhhhhhHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC
Q 018381 240 LSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD 319 (357)
Q Consensus 240 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 319 (357)
+........+.....+...|......|++++|+..|+++++.+|+ ++.++..+|.++...|++++|+..++++++++|+
T Consensus 64 l~~~~l~~~p~~~~~l~~l~~~~l~~g~~~~A~~~l~~~l~~~P~-~~~a~~~la~~l~~~g~~~~Ai~~l~~Al~l~P~ 142 (656)
T PRK15174 64 LLSDRVLTAKNGRDLLRRWVISPLASSQPDAVLQVVNKLLAVNVC-QPEDVLLVASVLLKSKQYATVADLAEQAWLAFSG 142 (656)
T ss_pred HhHHHHHhCCCchhHHHHHhhhHhhcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 334444556677777888888888999999999999999999999 9999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 320 WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 320 ~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
++.++..+|.++..+|++++|+..++++++.+|++
T Consensus 143 ~~~a~~~la~~l~~~g~~~eA~~~~~~~~~~~P~~ 177 (656)
T PRK15174 143 NSQIFALHLRTLVLMDKELQAISLARTQAQEVPPR 177 (656)
T ss_pred cHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999988888864
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.6e-10 Score=112.70 Aligned_cols=95 Identities=14% Similarity=0.085 Sum_probs=87.3
Q ss_pred hhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChH
Q 018381 259 GDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNN 338 (357)
Q Consensus 259 g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~ 338 (357)
+......|++++|+..|+++++++|+ ..+|.++|.++.++|++++|+..++++++++|+++.+++++|.++..+|+++
T Consensus 583 a~~l~~~Gr~~eAl~~~~~AL~l~P~--~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd~~~a~~nLG~aL~~~G~~e 660 (987)
T PRK09782 583 HAQRYIPGQPELALNDLTRSLNIAPS--ANAYVARATIYRQRHNVPAAVSDLRAALELEPNNSNYQAALGYALWDSGDIA 660 (987)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHH
Confidence 33444559999999999999999995 7789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccccc
Q 018381 339 DAQETLKDGTNLEAKKH 355 (357)
Q Consensus 339 ~A~~~~~~al~l~p~~~ 355 (357)
+|++.|+++++++|++.
T Consensus 661 eAi~~l~~AL~l~P~~~ 677 (987)
T PRK09782 661 QSREMLERAHKGLPDDP 677 (987)
T ss_pred HHHHHHHHHHHhCCCCH
Confidence 99999999999999863
|
|
| >COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.8e-10 Score=95.45 Aligned_cols=110 Identities=15% Similarity=0.054 Sum_probs=101.6
Q ss_pred hhhHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCC---hHHHHHHHHHHHhhCCCC
Q 018381 244 MWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM---PQEALGDAMQAQVISPDW 320 (357)
Q Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~~ 320 (357)
...++|++++.|...|..++..|++..|+..|.+|+++.|+ ++..+..+|.+++...+ -.+|...+++|+.+||++
T Consensus 148 ~L~~nP~d~egW~~Lg~~ym~~~~~~~A~~AY~~A~rL~g~-n~~~~~g~aeaL~~~a~~~~ta~a~~ll~~al~~D~~~ 226 (287)
T COG4235 148 HLQQNPGDAEGWDLLGRAYMALGRASDALLAYRNALRLAGD-NPEILLGLAEALYYQAGQQMTAKARALLRQALALDPAN 226 (287)
T ss_pred HHHhCCCCchhHHHHHHHHHHhcchhHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhcCCcc
Confidence 34567889999999999999999999999999999999999 99999999999776643 568999999999999999
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 321 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 321 ~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+.+.+.+|..++..|+|++|+..+++.+++.|-+
T Consensus 227 iral~lLA~~afe~g~~~~A~~~Wq~lL~~lp~~ 260 (287)
T COG4235 227 IRALSLLAFAAFEQGDYAEAAAAWQMLLDLLPAD 260 (287)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999999998864
|
|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.5e-10 Score=101.48 Aligned_cols=98 Identities=13% Similarity=0.044 Sum_probs=92.9
Q ss_pred hhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCh
Q 018381 258 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMN 337 (357)
Q Consensus 258 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~ 337 (357)
-|+=+.-+++.+.|+.+|++|++++|. ...+|..+|.=|.++++-..|+..|++|++++|.+-.|||.+|++|..++..
T Consensus 336 IaNYYSlr~eHEKAv~YFkRALkLNp~-~~~aWTLmGHEyvEmKNt~AAi~sYRrAvdi~p~DyRAWYGLGQaYeim~Mh 414 (559)
T KOG1155|consen 336 IANYYSLRSEHEKAVMYFKRALKLNPK-YLSAWTLMGHEYVEMKNTHAAIESYRRAVDINPRDYRAWYGLGQAYEIMKMH 414 (559)
T ss_pred ehhHHHHHHhHHHHHHHHHHHHhcCcc-hhHHHHHhhHHHHHhcccHHHHHHHHHHHhcCchhHHHHhhhhHHHHHhcch
Confidence 356666788999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccccC
Q 018381 338 NDAQETLKDGTNLEAKKHR 356 (357)
Q Consensus 338 ~~A~~~~~~al~l~p~~~~ 356 (357)
.-|+-+|++|+++.|.+.|
T Consensus 415 ~YaLyYfqkA~~~kPnDsR 433 (559)
T KOG1155|consen 415 FYALYYFQKALELKPNDSR 433 (559)
T ss_pred HHHHHHHHHHHhcCCCchH
Confidence 9999999999999998654
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.8e-10 Score=99.50 Aligned_cols=64 Identities=23% Similarity=0.223 Sum_probs=53.0
Q ss_pred CCC-CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCccccc
Q 018381 1 MPN-ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 72 (357)
++| ++|.+++. ...++... +.+|+.+|.+||+.| |+||||||.|||++.++.++|+|||.+...
T Consensus 128 l~G~~~L~~~l~---~~~l~~~~----~~~i~~~l~~lH~~G-I~HrDlkp~NILv~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 128 IEGARDLVALLQ---EAPLSEEQ----WQAIGQLIARFHDAG-VYHADLNAHNILLDPDGKFWLIDFDRGELR 192 (239)
T ss_pred cCCCCCHHHHHh---cCCCCHHH----HHHHHHHHHHHHHCC-CCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence 355 58888873 34566543 678999999999999 999999999999999899999999987654
|
|
| >PRK10049 pgaA outer membrane protein PgaA; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.4e-09 Score=109.63 Aligned_cols=106 Identities=12% Similarity=-0.005 Sum_probs=98.5
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+..+..+...|..+...|++++|+..|+++++++|. ++.++..++.++...|++++|+..++++++.+|+++. ++.+
T Consensus 45 ~~~~a~~~~~lA~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~l~~~g~~~eA~~~l~~~l~~~P~~~~-~~~l 122 (765)
T PRK10049 45 MQLPARGYAAVAVAYRNLKQWQNSLTLWQKALSLEPQ-NDDYQRGLILTLADAGQYDEALVKAKQLVSGAPDKAN-LLAL 122 (765)
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHH-HHHH
Confidence 3344555788899999999999999999999999999 9999999999999999999999999999999999999 9999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|.++...|++++|+..|+++++++|++.
T Consensus 123 a~~l~~~g~~~~Al~~l~~al~~~P~~~ 150 (765)
T PRK10049 123 AYVYKRAGRHWDELRAMTQALPRAPQTQ 150 (765)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999863
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.8e-10 Score=107.28 Aligned_cols=166 Identities=22% Similarity=0.264 Sum_probs=125.4
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHH----HHHHHhcCCCceeecCCCCCeeeCCC-CCeEEecCCcccccCCCC
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQ----ALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSRDGK 76 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~----~l~~lH~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~ 76 (357)
.|.+|.++.+. ....++...++..+.+... ||..+|+.+ ++|-|+||.||+...+ ...+++|||+........
T Consensus 200 ~~~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~-~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~ 277 (524)
T KOG0601|consen 200 CGESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN-IVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGN 277 (524)
T ss_pred ccchhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCc-ccccccchhheecccccceeecCCcceeEEccCCc
Confidence 46778888742 3445888888999999888 999999999 9999999999999999 779999999987665443
Q ss_pred ---------ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhh
Q 018381 77 ---------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 147 (357)
Q Consensus 77 ---------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (357)
...|..-|++||... +-++..+|+||+|.++.+.++|..++.....+.|. ..-...+..++....
T Consensus 278 ~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~-----~~r~~~ip~e~~~~~ 351 (524)
T KOG0601|consen 278 FSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS-----QLRQGYIPLEFCEGG 351 (524)
T ss_pred cccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCcc-----ccccccCchhhhcCc
Confidence 114567899999997 46788999999999999999998765543222111 111112333444444
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 148 GTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 148 ~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...+...+..++..+|-.|++.+.+..+
T Consensus 352 s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 352 SSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred chhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 5567779999999999999998877654
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.4e-09 Score=97.48 Aligned_cols=109 Identities=9% Similarity=-0.072 Sum_probs=95.4
Q ss_pred hHHHHHhHHHHHhhhHHhhcCCh--hHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHH
Q 018381 246 TDQIQETLNSKKRGDAAFRAKDF--PTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTA 323 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~~~--~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a 323 (357)
...+.....+..++....+.|+. ++++.+++++|+.+|. +..+|.+|+.++..+|++++|+++++++|++||++..|
T Consensus 100 ~~npknyqaW~~R~~~l~~l~~~~~~~el~~~~kal~~dpk-Ny~AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~sA 178 (320)
T PLN02789 100 EDNPKNYQIWHHRRWLAEKLGPDAANKELEFTRKILSLDAK-NYHAWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNNSA 178 (320)
T ss_pred HHCCcchHHhHHHHHHHHHcCchhhHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCchhH
Confidence 34566666777787777777764 7889999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhC---CCh----HHHHHHHHHhhccccccc
Q 018381 324 FYLQAAALFGL---GMN----NDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 324 ~~~~g~~~~~l---g~~----~~A~~~~~~al~l~p~~~ 355 (357)
|+++|.++..+ |++ ++++++..++++++|+|.
T Consensus 179 W~~R~~vl~~~~~l~~~~~~~e~el~y~~~aI~~~P~N~ 217 (320)
T PLN02789 179 WNQRYFVITRSPLLGGLEAMRDSELKYTIDAILANPRNE 217 (320)
T ss_pred HHHHHHHHHhccccccccccHHHHHHHHHHHHHhCCCCc
Confidence 99999999887 444 478888899999999875
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.2e-10 Score=87.10 Aligned_cols=82 Identities=11% Similarity=-0.042 Sum_probs=78.4
Q ss_pred HHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 018381 273 ECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 273 ~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p 352 (357)
+.|+++++.+|+ +..+.+.+|.+++..|++++|+..+++++.++|+++.+++++|.+++.+|++++|+..|+++++++|
T Consensus 4 ~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p 82 (135)
T TIGR02552 4 ATLKDLLGLDSE-QLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPYNSRYWLGLAACCQMLKEYEEAIDAYALAAALDP 82 (135)
T ss_pred hhHHHHHcCChh-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 468899999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc
Q 018381 353 KKH 355 (357)
Q Consensus 353 ~~~ 355 (357)
++.
T Consensus 83 ~~~ 85 (135)
T TIGR02552 83 DDP 85 (135)
T ss_pred CCh
Confidence 753
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >KOG1173 consensus Anaphase-promoting complex (APC), Cdc16 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.9e-10 Score=103.52 Aligned_cols=108 Identities=15% Similarity=0.154 Sum_probs=96.2
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCC------chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCCh
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV------SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP 321 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 321 (357)
.|.+.-.+.+.|..+|..+.|.+|+..|+.++..-+.. =...+.|+|.++.+++++++||..+++||.+.|.++
T Consensus 410 ~P~Dplv~~Elgvvay~~~~y~~A~~~f~~~l~~ik~~~~e~~~w~p~~~NLGH~~Rkl~~~~eAI~~~q~aL~l~~k~~ 489 (611)
T KOG1173|consen 410 APSDPLVLHELGVVAYTYEEYPEALKYFQKALEVIKSVLNEKIFWEPTLNNLGHAYRKLNKYEEAIDYYQKALLLSPKDA 489 (611)
T ss_pred CCCcchhhhhhhheeehHhhhHHHHHHHHHHHHHhhhccccccchhHHHHhHHHHHHHHhhHHHHHHHHHHHHHcCCCch
Confidence 46677788899999999999999999999998422221 123589999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 322 TAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 322 ~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
.+|-..|.+|..+|..+.|+..|.++|.++|++.
T Consensus 490 ~~~asig~iy~llgnld~Aid~fhKaL~l~p~n~ 523 (611)
T KOG1173|consen 490 STHASIGYIYHLLGNLDKAIDHFHKALALKPDNI 523 (611)
T ss_pred hHHHHHHHHHHHhcChHHHHHHHHHHHhcCCccH
Confidence 9999999999999999999999999999999973
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-10 Score=110.06 Aligned_cols=150 Identities=21% Similarity=0.284 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCc-------------cccCCCCCCccc
Q 018381 23 RVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS-------------YSTNLAFTPPEY 89 (357)
Q Consensus 23 ~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------------~~gt~~y~aPE~ 89 (357)
...=+.++++|+.|+|....+||++|.|++|.++.++..||+.|+++........ ......|.|||+
T Consensus 101 ~f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~ 180 (700)
T KOG2137|consen 101 GFANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEY 180 (700)
T ss_pred hhhhhhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchh
Confidence 3344567779999999986699999999999999999999999998764433111 123467999999
Q ss_pred cccCCCCccccccchHHHHHHHH-hCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC
Q 018381 90 LRTGRVIPESVVYSFGTLLLDLL-SGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 168 (357)
Q Consensus 90 ~~~~~~~~~~Dv~slG~~l~el~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps 168 (357)
+.+...+.++|++|+||++|.+. .|+..+........ ..+.......-...++..+|.++.+=+.+++..++.-||+
T Consensus 181 ~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~--~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~ 258 (700)
T KOG2137|consen 181 LLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS--YSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPT 258 (700)
T ss_pred hccccccccccceeeeeEEEEEecCCcchhhccCCcch--hhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcc
Confidence 99877889999999999999998 45443322211111 1111111111122345678889999999999999999998
Q ss_pred HHHHHH
Q 018381 169 AKSLVA 174 (357)
Q Consensus 169 ~~~v~~ 174 (357)
+..+..
T Consensus 259 ~~~l~~ 264 (700)
T KOG2137|consen 259 LDLLLS 264 (700)
T ss_pred hhhhhc
Confidence 777644
|
|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.9e-09 Score=91.60 Aligned_cols=105 Identities=22% Similarity=0.330 Sum_probs=99.7
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
++...+..+...++..||+..|+.+.+..|+..|= ++.++-.||.||...|+...||.+++.|-++..++.+++|.++.
T Consensus 153 ~e~~~l~~ql~s~~~~GD~~~ai~~i~~llEi~~W-da~l~~~Rakc~i~~~e~k~AI~Dlk~askLs~DnTe~~ykis~ 231 (504)
T KOG0624|consen 153 QEHWVLVQQLKSASGSGDCQNAIEMITHLLEIQPW-DASLRQARAKCYIAEGEPKKAIHDLKQASKLSQDNTEGHYKISQ 231 (504)
T ss_pred HHHHHHHHHHHHHhcCCchhhHHHHHHHHHhcCcc-hhHHHHHHHHHHHhcCcHHHHHHHHHHHHhccccchHHHHHHHH
Confidence 34456678888999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
.+|..|+.+.++...+.||++||+..
T Consensus 232 L~Y~vgd~~~sL~~iRECLKldpdHK 257 (504)
T KOG0624|consen 232 LLYTVGDAENSLKEIRECLKLDPDHK 257 (504)
T ss_pred HHHhhhhHHHHHHHHHHHHccCcchh
Confidence 99999999999999999999999965
|
|
| >PRK11447 cellulose synthase subunit BcsC; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.6e-09 Score=112.62 Aligned_cols=108 Identities=10% Similarity=0.002 Sum_probs=94.7
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchH--------------HHhhHHHHHHhcCChHHHHHHHHH
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT--------------VFARRCLCYLLSDMPQEALGDAMQ 312 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~--------------~~~~~a~~~~~~~~~~~A~~~~~~ 312 (357)
..+.++..+...|..+++.|++++|+..|+++++++|+ +.. ....+|.++...|++++|+..+++
T Consensus 298 ~~P~~~~a~~~Lg~~~~~~g~~~eA~~~l~~Al~~~p~-~~~~~~~~~ll~~~~~~~~~~~g~~~~~~g~~~eA~~~~~~ 376 (1157)
T PRK11447 298 ANPKDSEALGALGQAYSQQGDRARAVAQFEKALALDPH-SSNRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERLYQQ 376 (1157)
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ccchhHHHHHHHhhhHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 34566777888899999999999999999999999987 542 224567888999999999999999
Q ss_pred HHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 313 al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+++++|+++.+++.+|.++...|++++|++.|+++++++|++.
T Consensus 377 Al~~~P~~~~a~~~Lg~~~~~~g~~~eA~~~y~~aL~~~p~~~ 419 (1157)
T PRK11447 377 ARQVDNTDSYAVLGLGDVAMARKDYAAAERYYQQALRMDPGNT 419 (1157)
T ss_pred HHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999863
|
|
| >PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.00 E-value=6e-10 Score=99.06 Aligned_cols=104 Identities=17% Similarity=0.085 Sum_probs=88.5
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
.++..+...|..+.+.|++++|+..|+++++++|+ +..+...++.++...|+++++...+....+..|+++..+..+|.
T Consensus 144 ~~~~~~~~~a~~~~~~G~~~~A~~~~~~al~~~P~-~~~~~~~l~~~li~~~~~~~~~~~l~~~~~~~~~~~~~~~~la~ 222 (280)
T PF13429_consen 144 DSARFWLALAEIYEQLGDPDKALRDYRKALELDPD-DPDARNALAWLLIDMGDYDEAREALKRLLKAAPDDPDLWDALAA 222 (280)
T ss_dssp T-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-TT--HHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-HTSCCHCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 45667788999999999999999999999999999 99999999999999999999888888888777888888899999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
++..+|++++|+..|+++++.+|++
T Consensus 223 ~~~~lg~~~~Al~~~~~~~~~~p~d 247 (280)
T PF13429_consen 223 AYLQLGRYEEALEYLEKALKLNPDD 247 (280)
T ss_dssp HHHHHT-HHHHHHHHHHHHHHSTT-
T ss_pred Hhccccccccccccccccccccccc
Confidence 9999999999999999999988865
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 357 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 9e-13 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 1e-12 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 1e-09 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 3e-09 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-09 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 4e-09 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 4e-09 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 7e-08 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 6e-06 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 7e-06 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 7e-06 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 7e-06 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 8e-06 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 8e-06 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 8e-06 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 1e-05 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 1e-05 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 2e-05 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 3e-05 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 3e-05 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 3e-05 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 3e-05 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 3e-05 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 3e-05 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 3e-05 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 3e-05 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 3e-05 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 3e-05 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 4e-05 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 4e-05 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 5e-05 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 5e-05 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 5e-05 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 6e-05 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 1e-04 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 1e-04 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 1e-04 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 2e-04 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 2e-04 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 2e-04 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 2e-04 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 2e-04 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 2e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 3e-04 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 3e-04 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 3e-04 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 3e-04 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 3e-04 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 3e-04 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 3e-04 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 4e-04 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 4e-04 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 4e-04 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 4e-04 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 4e-04 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 4e-04 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 4e-04 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 4e-04 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 4e-04 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 4e-04 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 4e-04 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 4e-04 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 4e-04 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 4e-04 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 5e-04 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 5e-04 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 5e-04 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 5e-04 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 6e-04 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 6e-04 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 6e-04 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 6e-04 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 6e-04 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 6e-04 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 6e-04 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 7e-04 | ||
| 1a17_A | 166 | Tetratricopeptide Repeats Of Protein Phosphatase 5 | 8e-04 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 9e-04 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|1A17|A Chain A, Tetratricopeptide Repeats Of Protein Phosphatase 5 Length = 166 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 1e-30
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 1 MPNETLSKHLFHWENQ-PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR------I 53
MPN +L L + P+ W MR ++A A +++ L+ + + +R I
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINF-------LHENHHIHRDIKSANI 164
Query: 54 LFDQDGNPRLSCFGLMK-NSRDGKSY-STNLAFTP----PEYLRTGRVIPESVVYSFGTL 107
L D+ ++S FGL + + + ++ ++ + T PE L G + P+S +YSFG +
Sbjct: 165 LLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVV 223
Query: 108 LLDLLSGK-----HIPPSHALD-----LIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157
LL++++G H P LD K +D + + + +AS+
Sbjct: 224 LLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQ 282
Query: 158 CLQYEPRERPNAKSLVASLTPLQ 180
CL + +RP+ K + L +
Sbjct: 283 CLHEKKNKRPDIKKVQQLLQEMT 305
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 6e-29
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 36/206 (17%)
Query: 1 MPNETLSKHLF--HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLN---TYR--- 52
M N +++ L P+ W R R+AL A+ L Y L+ + +R
Sbjct: 109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAY-------LHDHCDPKIIHRDVK 161
Query: 53 ---ILFDQDGNPRLSCFGLMKNSRDGKSY-STNLAFT----PPEYLRTGRVIPESVVYSF 104
IL D++ + FGL K ++ +T + T PEYL TG+ ++ V+ +
Sbjct: 162 AANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 221
Query: 105 GTLLLDLLSGK-----HIPP--------SHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151
G +LL+L++G+ L++ K L+D L+G++ +++ +L
Sbjct: 222 GVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQL 281
Query: 152 VRLASRCLQYEPRERPNAKSLVASLT 177
+++A C Q P ERP +V L
Sbjct: 282 IQVALLCTQSSPMERPKMSEVVRMLE 307
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 1e-26
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 32/201 (15%)
Query: 1 MPNETLSKHLF--HWENQPMKWAMRVRVALYLAQALDYCSSKGRAL------YHDLNTYR 52
M N L +HL+ M W R+ + + A+ L Y L + D+ +
Sbjct: 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHY-------LHTRAIIHRDVKSIN 169
Query: 53 ILFDQDGNPRLSCFGLMK-NSRDGKSY-STNLAFTP----PEYLRTGRVIPESVVYSFGT 106
IL D++ P+++ FG+ K + +++ ST + T PEY GR+ +S VYSFG
Sbjct: 170 ILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGV 229
Query: 107 LLLDLLSGK----HIPPSH-------ALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155
+L ++L + P A++ ++D L + + A
Sbjct: 230 VLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTA 289
Query: 156 SRCLQYEPRERPNAKSLVASL 176
+CL +RP+ ++ L
Sbjct: 290 VKCLALSSEDRPSMGDVLWKL 310
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 4e-17
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQE 305
+++ K++G+ A + A++CY+ I + P +++ R Y Q+
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIK----LDPHNHVLYSNRSAAYAKKGDYQK 56
Query: 306 ALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKK 354
A D + + PDW + +AAAL L +A+ T + + N + K+
Sbjct: 57 AYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKE 110
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 6e-17
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 21/196 (10%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDG 59
+L HL H + + +A A+ +DY +K + H DL + I +D
Sbjct: 101 CEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDN 157
Query: 60 NPRLSCFGL--MKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESV---VYSFGTLLLD 110
++ FGL K+ G L+ + PE +R P S VY+FG +L +
Sbjct: 158 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 217
Query: 111 LLSGK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 166
L++G+ +I + + G+ L S ++ + RL + CL+ + ER
Sbjct: 218 LMTGQLPYSNINNRDQIIEMVGRGSLSPDLS----KVRSNCPKRMKRLMAECLKKKRDER 273
Query: 167 PNAKSLVASLTPLQKE 182
P+ ++A + L +E
Sbjct: 274 PSFPRILAEIEELARE 289
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 1e-15
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV---FARRCLCYLLSDMPQEALGDAMQ 312
K G+AA K++ AI+ YT + ++P + R Y S ++A DA
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALS----IAPANPIYLSNRAAAYSASGQHEKAAEDAEL 70
Query: 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLE 351
A V+ P + A+ A F + A+E + G E
Sbjct: 71 ATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 4e-15
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 12/107 (11%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQEALGDAMQ 312
K +G+ F+ D+PTA+ Y + P +++ R C Q AL D
Sbjct: 17 KNKGNEYFKKGDYPTAMRHYNEAVK----RDPENAILYSNRAACLTKLMEFQRALDDCDT 72
Query: 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKK 354
+ + + +AA L + + AQ + D +N EA++
Sbjct: 73 CIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEARE 119
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 6e-15
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQEALGDAMQ 312
K +G+ F+ D+P A++ YT I +P +++ R CY Q AL D +
Sbjct: 20 KNKGNECFQKGDYPQAMKHYTEAIK----RNPKDAKLYSNRAACYTKLLEFQLALKDCEE 75
Query: 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKK 354
+ P + + +AAAL + A + + D + EA
Sbjct: 76 CIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAAD 122
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 7e-15
Identities = 34/191 (17%), Positives = 70/191 (36%), Gaps = 19/191 (9%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDG 59
MP +L L N + + V+ AL +A+ + + + + LN+ ++ D+D
Sbjct: 91 MPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDM 150
Query: 60 NPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESV---VYSFGTLLLDLLSGK- 115
R+S + K S A+ PE L+ ++SF LL +L++ +
Sbjct: 151 TARISMADV-KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREV 209
Query: 116 ---HIPPSHALDLIRGKNF-LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKS 171
+ + + + + +L C+ +P +RP
Sbjct: 210 PFADLSNMEIGMKVALEGLRPTIPPGISP---------HVSKLMKICMNEDPAKRPKFDM 260
Query: 172 LVASLTPLQKE 182
+V L +Q +
Sbjct: 261 IVPILEKMQDK 271
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 7e-15
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQEALGDAMQ 312
K + + F+AKD+ AI+ Y+ I+ ++P+ + R L YL ++ ALGDA +
Sbjct: 17 KTQANDYFKAKDYENAIKFYSQAIE----LNPSNAIYYGNRSLAYLRTECYGYALGDATR 72
Query: 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKK 354
A + + +Y +AA+ LG A + + +AK
Sbjct: 73 AIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKM 119
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 2e-14
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV---FARRCLCYLLSDMPQEALGDAMQ 312
K++G+ F + +P A CY I +P V + R LCYL P++AL D +
Sbjct: 13 KEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRR 68
Query: 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 357
A + A + + ++A L+ +L ++ N
Sbjct: 69 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 113
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 3e-14
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 20/194 (10%)
Query: 1 MPNETLSKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQD 58
+ +L + L + + R+ +A +A+ ++Y ++ + H +L + +L D+
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKK 175
Query: 59 GNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSG 114
++ FGL + S + A TP PE LR +S VYSFG +L +L +
Sbjct: 176 YTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL 235
Query: 115 K----HIPPSHALDLIRGKNF-LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 169
+ ++ P+ + + K L + + ++ + C EP +RP+
Sbjct: 236 QQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP---------QVAAIIEGCWTNEPWKRPSF 286
Query: 170 KSLVASLTPLQKEA 183
+++ L PL K A
Sbjct: 287 ATIMDLLRPLIKSA 300
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 4e-14
Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 12/109 (11%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQEALGDAMQ 312
K G+ + ++F A+ Y I+ ++P F R Y A+ D +
Sbjct: 16 KTEGNEQMKVENFEAAVHFYGKAIE----LNPANAVYFCNRAAAYSKLGNYAGAVQDCER 71
Query: 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKKHR 356
A I P + A+ AL L + +A K D N K +
Sbjct: 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNL 120
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 4e-14
Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 39/212 (18%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDG 59
TL + + ++A + + + Y +KG + H DL + + +D +G
Sbjct: 111 CKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFYD-NG 166
Query: 60 NPRLSCFGL--MKNSRDGKSYSTNLAFTP-------PEYLRTGRVIPESV---------V 101
++ FGL + L PE +R E V
Sbjct: 167 KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDV 226
Query: 102 YSFGTLLLDLLSGK----HIPPSHALDLIRGKNFLMLM--DSCLEGHFSNDDGTELVRLA 155
++ GT+ +L + + P + + G + + E+ +
Sbjct: 227 FALGTIWYELHAREWPFKTQPAEAIIWQM-GTGMKPNLSQIGMGK---------EISDIL 276
Query: 156 SRCLQYEPRERPNAKSLVASLTPLQKEAEVPS 187
C +E ERP L+ L L K S
Sbjct: 277 LFCWAFEQEERPTFTKLMDMLEKLPKRNRRLS 308
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 6e-14
Identities = 36/222 (16%), Positives = 65/222 (29%), Gaps = 40/222 (18%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY--------H-DLNTY 51
+LS L + W +A +A+ L Y L H D+ +
Sbjct: 104 HEKGSLSDFLK---ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSK 160
Query: 52 RILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFT------PPEYLRTGRVIPESV----- 100
+L + ++ FGL GKS PE L
Sbjct: 161 NVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRID 220
Query: 101 VYSFGTLLLDLLSGK----------------HIPPSHALDLIRGKNFLMLMDSCLEGHFS 144
+Y+ G +L +L S I +L+ ++ L ++
Sbjct: 221 MYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQ 280
Query: 145 NDDGT-ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 185
G L C ++ R +A + +T +Q+ +
Sbjct: 281 KHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLTNI 322
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 70.3 bits (172), Expect = 6e-14
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV---FARRCLCYLLSDMPQEALGDAMQ 312
K++G+ F + +P A CY I +P V + R LCYL P++AL D +
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRR 63
Query: 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 357
A + A + + ++A L+ +L ++ N
Sbjct: 64 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 108
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 2e-13
Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 28/197 (14%)
Query: 1 MPNETLSKHLFHWENQP-MKWAMRVRVALYLAQALDYC-SSKGRALYH-DLNTYRILFDQ 57
+L L E P A + L +Q + Y S + +AL H DL +L
Sbjct: 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA 140
Query: 58 DGN-PRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESV-VYSFGTLLLDL 111
G ++ FG + D +++ TN + PE G E V+S+G +L ++
Sbjct: 141 GGTVLKICDFGT---ACDIQTHMTNNKGSAAWMAPEVFE-GSNYSEKCDVFSWGIILWEV 196
Query: 112 LSGK------HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRE 165
++ + P + + L+ + + + L +RC +P +
Sbjct: 197 ITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK---------PIESLMTRCWSKDPSQ 247
Query: 166 RPNAKSLVASLTPLQKE 182
RP+ + +V +T L +
Sbjct: 248 RPSMEEIVKIMTHLMRY 264
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 1e-12
Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFI--DGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQA 313
+K G+ F+ D+ A+ YT + D + R C+L + +A +A +A
Sbjct: 32 RKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91
Query: 314 QVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKK 354
A Y ++ AL LG + A L+ + N ++
Sbjct: 92 IEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQE 137
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 1e-12
Identities = 40/199 (20%), Positives = 75/199 (37%), Gaps = 34/199 (17%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDG 59
+P L L + P+KW++++R+ L +A ++Y ++ + H DL + I
Sbjct: 103 VPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD 161
Query: 60 NPRLSC-----FGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIP--ESV-VYSFGTL 107
C FGL S+ + L PE + E YSF +
Sbjct: 162 ENAPVCAKVADFGL---SQQSVHSVSGLLGNFQWMAPETIG-AEEESYTEKADTYSFAMI 217
Query: 108 LLDLLSGK----HIPPSHA--LDLIRGKNF-LMLMDSCLEGHFSNDDGTELVRLASRCLQ 160
L +L+G+ +++IR + + + C L + C
Sbjct: 218 LYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPP---------RLRNVIELCWS 268
Query: 161 YEPRERPNAKSLVASLTPL 179
+P++RP+ +V L+ L
Sbjct: 269 GDPKKRPHFSYIVKELSEL 287
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 2e-12
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALG 308
++ K + + F+AKD+ AI+ Y+ I+ + + R L YL ++ ALG
Sbjct: 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALG 61
Query: 309 DAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 345
DA +A + + +Y +AA+ LG A +
Sbjct: 62 DATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYE 98
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 4e-12
Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 7/103 (6%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV---FARRCLCYLLSDMPQEALGDAMQ 312
+ G F D+P A++ YT I +P ++ R EA+ D +
Sbjct: 8 RLEGKEYFTKSDWPNAVKAYTEMIK----RAPEDARGYSNRAAALAKLMSFPEAIADCNK 63
Query: 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355
A P++ A+ +A A + A ETL +A+ +
Sbjct: 64 AIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN 106
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 65.1 bits (158), Expect = 7e-12
Identities = 29/203 (14%), Positives = 58/203 (28%), Gaps = 33/203 (16%)
Query: 14 ENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DL---NTYRILFDQDGNPRLSCFGLM 69
++ + R+++ L + + L G L H L + I+ DQ G L+ F +
Sbjct: 204 THKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHL 258
Query: 70 KNSRDGKSYSTNLAFTPPEYL----------RTGRVIPESVVYSFGTLLLDLLSGKHIPP 119
F PPE + ++ G + + P
Sbjct: 259 VRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LP 316
Query: 120 SHALDLIRGKNFLMLMDSCLEGHFSNDDGT--ELVRLASRCLQYEPRERPNAKSLVASLT 177
+ + G E F + + L L+Y +R + +
Sbjct: 317 NTDDAALGG----------SEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPE 366
Query: 178 PLQKEAEVPSYTLMGIPHGTAST 200
Q E+ + + G +
Sbjct: 367 YEQLRTELSAALPLYQTDGEPTR 389
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 59.6 bits (144), Expect = 3e-10
Identities = 27/174 (15%), Positives = 50/174 (28%), Gaps = 34/174 (19%)
Query: 14 ENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DL---NTYRILFDQDGNPRLSCFGLM 69
++ + R+++ L + + L G L H L + I+ DQ G L+ F +
Sbjct: 199 THKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHL 253
Query: 70 KNSRDGKSYSTNLAFTPPEYLRTGRVIPESV-----------VYSFGTLLLDLLSGKHIP 118
S + F PPE I ++ G ++ +
Sbjct: 254 VRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD--L 311
Query: 119 PSHALDLIRGKNFLMLMDSCLEG--HFSNDDGTELVRLASRCLQYEPRERPNAK 170
P I L + + + L L+Y +R
Sbjct: 312 P------ITKDAALGGSEWIFRSCKNIP----QPVRALLEGFLRYPKEDRLLPL 355
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 6e-10
Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 25/203 (12%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDG 59
+ TL + + W+ RV A +A + Y S + H DLN++ L ++
Sbjct: 89 IKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENK 145
Query: 60 NPRLSCFGL--------------MKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVV 101
N ++ FGL + + + P PE + + V
Sbjct: 146 NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDV 205
Query: 102 YSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 161
+SFG +L +++ + P + L R +F + + L+ + + + RC
Sbjct: 206 FSFGIVLCEIIGRVNADPDY---LPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDL 262
Query: 162 EPRERPNAKSLVASLTPLQKEAE 184
+P +RP+ L L L+
Sbjct: 263 DPEKRPSFVKLEHWLETLRMHLA 285
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 8e-10
Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 6/115 (5%)
Query: 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEAL 307
+ E + + AF + D+ AI ++ + R C++ P++A+
Sbjct: 139 KSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 197
Query: 308 GDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKKHRN 357
D A + D AFY + + LG + + ++ D + H
Sbjct: 198 SDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYK 252
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 1e-06
Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 5/102 (4%)
Query: 248 QIQETLNS----KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMP 303
+++ + G A A+ + +DG + + RR +L
Sbjct: 18 LYFQSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKS 76
Query: 304 QEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 345
+ AL D + + D+ A + L G ++A++ K
Sbjct: 77 KAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFK 118
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 3/101 (2%)
Query: 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFID---GGTMVSPTVFARRCLCYLLSDMPQ 304
Q+++ + + R + A Y + + R C C+ + P
Sbjct: 253 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPV 312
Query: 305 EALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 345
EA+ + + PD A +A A M ++A + +
Sbjct: 313 EAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYE 353
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 58.1 bits (140), Expect = 1e-09
Identities = 28/191 (14%), Positives = 50/191 (26%), Gaps = 23/191 (12%)
Query: 14 ENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DL---NTYRILFDQDGNPRLSCFGL- 68
+ L + SKG L H N + DG L
Sbjct: 187 FRGDEGILALHILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSAL 241
Query: 69 MKNSRDGKSYSTNLAFTPPEYL--RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI 126
K G + S + + P E+L T + G + + P +
Sbjct: 242 WKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF--LPFGLVTPG 299
Query: 127 RGKNFLMLMDSCL---EGHFSNDDGT--ELVRLASRCLQYEPRERPNAKSLVAS--LTPL 179
++ F + + L R L ++ R R + + L
Sbjct: 300 IKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL 359
Query: 180 QKE--AEVPSY 188
Q E + + +
Sbjct: 360 QNEISSSLSTG 370
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-09
Identities = 12/95 (12%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV---FARRCLCYLLSDMPQEALGDAMQ 312
K++G++ F+ + A+ CY I P ++ + + + +A+ Q
Sbjct: 8 KEQGNSLFKQGLYREAVHCYDQLIT----AQPQNPVGYSNKAMALIKLGEYTQAIQMCQQ 63
Query: 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDG 347
+ +++ + L + A +++
Sbjct: 64 GLRYTSTAEHV-AIRSKLQYRLELAQGAVGSVQIP 97
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 4e-09
Identities = 40/199 (20%), Positives = 73/199 (36%), Gaps = 35/199 (17%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYC-SSKGRALYH-DLNTYRILFDQD 58
L++ L + + + V A+ +A+ ++Y + H DL + IL Q
Sbjct: 88 ARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQK 144
Query: 59 GNPRLSC--------FGLMKNSRD-GKSYSTNLAFTP----PEYLRTGRVIPESVVYSFG 105
FGL +R+ ++ + A PE +R S V+S+G
Sbjct: 145 VENGDLSNKILKITDFGL---AREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYG 201
Query: 106 TLLLDLLSGK----HIPPSHALDLIRGKNF-LMLMDSCLEGHFSNDDGTELVRLASRCLQ 160
LL +LL+G+ I + L + +C E +L C
Sbjct: 202 VLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPE---------PFAKLMEDCWN 252
Query: 161 YEPRERPNAKSLVASLTPL 179
+P RP+ +++ LT +
Sbjct: 253 PDPHSRPSFTNILDQLTTI 271
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 4e-09
Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 6/115 (5%)
Query: 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEAL 307
+ E + + AF D+ AI ++ + R C++ P++A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 174
Query: 308 GDAMQAQVISPDWPTAFYLQAAALFGLGMNNDA----QETLK-DGTNLEAKKHRN 357
D A + D AFY + + LG + + +E LK D + H
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYK 229
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 9e-07
Identities = 17/117 (14%), Positives = 40/117 (34%), Gaps = 8/117 (6%)
Query: 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFID---GGTMVSPTVFARRCLCYLLSDMPQ 304
Q+++ + + R + A Y + + R C C+ + P
Sbjct: 230 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPV 289
Query: 305 EALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKKHR 356
EA+ + + PD A +A A M ++A + + + + + ++
Sbjct: 290 EAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGL 346
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 3e-05
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 7/93 (7%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQEALGDAMQ 312
+ G A A+ + +DG P + RR +L + AL D +
Sbjct: 7 LELGKKLLAAGQLADALSQFHAAVDG----DPDNYIAYYRRATVFLAMGKSKAALPDLTK 62
Query: 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 345
+ D+ A + L G ++A++ K
Sbjct: 63 VIALKMDFTAARLQRGHLLLKQGKLDEAEDDFK 95
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 1e-08
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP--TVFARRCLCYLLSDMPQEALGDAMQA 313
K +G+ FR K + AI+ Y ++ + ++ CY+ ++ + + +A
Sbjct: 10 KDKGNQFFRNKKYDDAIKYYNWALE----LKEDPVFYSNLSACYVSVGDLKKVVEMSTKA 65
Query: 314 QVISPDWPTAFYLQAAALFGLGMNNDAQETLK 345
+ PD+ +A+A GLG DA L
Sbjct: 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLS 97
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 9e-05
Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 6/89 (6%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFA--RRCLCYLLSDMPQEALGDAMQA 313
+ G F D A E I+ + P V + L + E +A
Sbjct: 241 EHTGIFKFLKNDPLGAHEDIKKAIE----LFPRVNSYIYMALIMADRNDSTEYYNYFDKA 296
Query: 314 QVISPDWPTAFYLQAAALFGLGMNNDAQE 342
+ + + +Y + F L + A +
Sbjct: 297 LKLDSNNSSVYYHRGQMNFILQNYDQAGK 325
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 4e-08
Identities = 32/169 (18%), Positives = 59/169 (34%), Gaps = 38/169 (22%)
Query: 30 LAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF---- 84
+ +AL Y S+G + H DL I D+ N ++ FGL KN +
Sbjct: 125 ILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 85 ----------TP----PEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPSHALDLIRGK 129
T E L E + +YS G + +++ P S G
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFST------GM 232
Query: 130 NFLMLMDSCLEG------HFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
+ ++ F ++ ++ + ++P +RP A++L
Sbjct: 233 ERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTL 281
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 6e-08
Identities = 36/233 (15%), Positives = 63/233 (27%), Gaps = 50/233 (21%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDY-------CSSKGRALYH-DLNTYR 52
PN +L K+L W R+A + + L Y A+ H DLN+
Sbjct: 94 YPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRN 150
Query: 53 ILFDQDGNPRLSCFGL--------MKNSRDGKSYSTNLAFTP----PEYLR-------TG 93
+L DG +S FGL + + + + + T PE L
Sbjct: 151 VLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXE 210
Query: 94 RVIPESVVYSFGTLLLDLLSGKHI-----------PPSHALDLIRGKNFLMLMDSCLEG- 141
+ + +Y+ G + ++ M + E
Sbjct: 211 SALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQ 270
Query: 142 ------HFSNDDGT--ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 186
+ + L C + R A+ + L E
Sbjct: 271 RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 6e-08
Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 7/94 (7%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV---FARRCLCYLLSDMPQEALGDAMQ 312
K+ G+ A++ KDF TA++ Y + + PT + Y + +
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKE----LDPTNMTYITNQAAVYFEKGDYNKCRELCEK 63
Query: 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKD 346
A + + + A A +G + +E KD
Sbjct: 64 AIEVGRENREDYRQIAKAYARIGNSYFKEEKYKD 97
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 7e-08
Identities = 35/154 (22%), Positives = 55/154 (35%), Gaps = 19/154 (12%)
Query: 30 LAQALDYCSSKGRALYH----DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFT 85
L AL C + + DL + D N +L FGL + S++ T
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGT 179
Query: 86 P----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 141
P PE + +S ++S G LL +L + PP + L EG
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM--PP------FTAFSQKELAGKIREG 231
Query: 142 HF---SNDDGTELVRLASRCLQYEPRERPNAKSL 172
F EL + +R L + RP+ + +
Sbjct: 232 KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 7e-08
Identities = 34/223 (15%), Positives = 76/223 (34%), Gaps = 42/223 (18%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-------DLNTYRI 53
N +L +L ++ + +++A L + ++ + DL + I
Sbjct: 117 HENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI 173
Query: 54 LFDQDGNPRLSCFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESV----- 100
L ++G ++ GL + ++ + T PE L +
Sbjct: 174 LVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLNRNHFQSYIM 232
Query: 101 --VYSFGTLLLDLLSGKHI--------PPSHALDLIRGKNFLMLMDSCLEG-------HF 143
+YSFG +L ++ P H L M C++ +
Sbjct: 233 ADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRW 292
Query: 144 SNDDGT-ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 185
S+D+ ++ +L + C + P R A + +L + + ++
Sbjct: 293 SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 1e-07
Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 23/160 (14%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN-SRDGKSYST 80
+V YL AL + S+G ++ D+ I G +L FGL+ G
Sbjct: 158 QVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV- 215
Query: 81 NLAF--TP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLML 134
P PE L+ + V+S G +L++ P G+ + L
Sbjct: 216 ---QEGDPRYMAPELLQGSYG-TAADVFSLGLTILEVACNME-LPHG------GEGWQQL 264
Query: 135 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVA 174
L F+ +EL + L+ +P+ R A++L+A
Sbjct: 265 RQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 2e-07
Identities = 44/207 (21%), Positives = 76/207 (36%), Gaps = 39/207 (18%)
Query: 10 LFHW-ENQPMKWAMRVRVALY----LAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRL 63
L W + V L+ +A+A+++ SKG L H DL I F D ++
Sbjct: 102 LKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKV 159
Query: 64 SCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV------IPESV----------VYSFGTL 107
FGL+ + T L P TG+V PE + ++S G +
Sbjct: 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLI 219
Query: 108 LLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT---ELVRLASRCLQYEPR 164
L +LL P S ++ +R + F + L P
Sbjct: 220 LFELL----YPFSTQMERVR------TLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPM 269
Query: 165 ERPNAKSLVASLTPLQKEAEVPSYTLM 191
ERP A +++ + + ++ + P T++
Sbjct: 270 ERPEAINIIEN--AVFEDLDFPGKTVL 294
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 3e-07
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 7/94 (7%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV---FARRCLCYLLSDMPQEALGDAMQ 312
K G+AA++ KDF A Y I+ + P+ + + Y E + +
Sbjct: 12 KDLGNAAYKQKDFEKAHVHYDKAIE----LDPSNITFYNNKAAVYFEEKKFAECVQFCEK 67
Query: 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKD 346
A + + + L A A+ G Q L
Sbjct: 68 AVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSL 101
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 8e-07
Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 19/158 (12%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 81
++ + Q AL + + + L+ D+ + I +DG +L FG+ + +
Sbjct: 126 QILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA 184
Query: 82 LAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS 137
TP PE +S +++ G +L +L + K A + L+
Sbjct: 185 CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK--HAFEA------GSMKNLVLK 236
Query: 138 CLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSL 172
+ G F S +L L S+ + PR+RP+ S+
Sbjct: 237 IISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSI 274
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 1e-06
Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 18/148 (12%)
Query: 30 LAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP-- 86
+ + +DY SK L + DL I ++ FGL+ + ++ + + T
Sbjct: 131 ITKGVDYIHSKK--LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKG-TLRY 187
Query: 87 --PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 144
PE + + E +Y+ G +L +LL A + K F L D + F
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELLH----VCDTAFE--TSKFFTDLRDGIISDIFD 241
Query: 145 NDDGTELVRLASRCLQYEPRERPNAKSL 172
+ L + L +P +RPN +
Sbjct: 242 K----KEKTLLQKLLSKKPEDRPNTSEI 265
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 1e-06
Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 18/141 (12%)
Query: 226 EKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYT--------- 276
E + ++ + + + + +++Q + K+ G+ F+ + AI Y
Sbjct: 15 ENLYFQGAKKSIYDYTDE---EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHT 71
Query: 277 ------HFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330
+D + + CY + +A+ A + I + A Y A
Sbjct: 72 EEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVA 131
Query: 331 LFGLGMNNDAQETLKDGTNLE 351
G +A+E L +L
Sbjct: 132 NMYFGFLEEAKENLYKAASLN 152
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 34/177 (19%), Positives = 63/177 (35%), Gaps = 12/177 (6%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFD-QD 58
M + TL +L + MK + + + L + ++ + H DL I
Sbjct: 111 MTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT 168
Query: 59 GNPRLSCFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGK 115
G+ ++ GL R + + F PE ESV VY+FG +L++ + +
Sbjct: 169 GSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK--YDESVDVYAFGMCMLEMATSE 226
Query: 116 HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
P + + + F E+ + C++ ER + K L
Sbjct: 227 --YPYSECQNAA-QIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 3e-06
Identities = 34/162 (20%), Positives = 59/162 (36%), Gaps = 24/162 (14%)
Query: 30 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEY 89
+A+A+++ SKG ++ DL I F D ++ FGL+ + T L P
Sbjct: 173 IAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 90 LRTGRVI------PESV----------VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM 133
TG+V PE + ++S G +L +LL I
Sbjct: 232 THTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSF--STQMERVRIITD---- 285
Query: 134 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175
+ + F+ + + L P ERP A ++ +
Sbjct: 286 VRNLKFPLLFTQKY-PQEHMMVQDMLSPSPTERPEATDIIEN 326
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 4e-06
Identities = 16/127 (12%), Positives = 41/127 (32%), Gaps = 19/127 (14%)
Query: 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYT---HFIDGGTMVSPTVFAR----------- 292
++++++ K+RG F+ + A+ Y +++ + S +
Sbjct: 142 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLN 201
Query: 293 RCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DG 347
+C+L A+ +A + + + A + A+ +
Sbjct: 202 LAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYP 261
Query: 348 TNLEAKK 354
N AK
Sbjct: 262 NNKAAKT 268
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 4e-06
Identities = 33/220 (15%), Positives = 70/220 (31%), Gaps = 42/220 (19%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDY-----CSSKGR-ALYH-DLNTYRI 53
+ +L +L + +++AL A L + ++G+ A+ H DL + I
Sbjct: 122 HEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI 178
Query: 54 LFDQDGNPRLSCFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESV----- 100
L ++G ++ GL + + T PE L + +
Sbjct: 179 LVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSINMKHFESFKR 237
Query: 101 --VYSFGTLLLDLLSGKHI--------PPSHALDLIRGKNFLMLMDSCLEGH-------- 142
+Y+ G + ++ I P + L M C +
Sbjct: 238 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW 297
Query: 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182
S + + ++ C R A + +L+ L ++
Sbjct: 298 QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP---TVFARRCLCYLLSDMPQEALGDAMQ 312
K RG+ F AK+F AI+ Y + I+ + P ++ CY+ + ++ + +
Sbjct: 29 KNRGNHFFTAKNFNEAIKYYQYAIE----LDPNEPVFYSNISACYISTGDLEKVIEFTTK 84
Query: 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 345
A I PD A +A+A LG DA L
Sbjct: 85 ALEIKPDHSKALLRRASANESLGNFTDAMFDLS 117
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 6/89 (6%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFA--RRCLCYLLSDMPQEALGDAMQA 313
G F + A I+ + PT + L + QE +A
Sbjct: 247 CYTGIFHFLKNNLLDAQVLLQESIN----LHPTPNSYIFLALTLADKENSQEFFKFFQKA 302
Query: 314 QVISPDWPTAFYLQAAALFGLGMNNDAQE 342
++P++P +Y + F L +A+E
Sbjct: 303 VDLNPEYPPTYYHRGQMYFILQDYKNAKE 331
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 6e-06
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 16/149 (10%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST 80
R A Y+ + AL YC SK + H D+ +L G +++ FG ++ +
Sbjct: 110 RTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 167
Query: 81 --NLAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS 137
L + PPE + GR+ E V ++S G L + L GK PP A + ++
Sbjct: 168 CGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQETYKRISRVEF 224
Query: 138 CLEGHFSNDDGTELVRLASRCLQYEPRER 166
+ L SR L++ P +R
Sbjct: 225 TFPDFVTEG----ARDLISRLLKHNPSQR 249
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 8e-06
Identities = 38/148 (25%), Positives = 56/148 (37%), Gaps = 23/148 (15%)
Query: 30 LAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST---NLAFT 85
+ A+ YC K + H DL +L D D N +++ FG G +
Sbjct: 123 IVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 86 PPEYLR----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 141
PE + G PE V+S G +L L+SG +P G+N L + L G
Sbjct: 181 APELFQGKKYDG---PEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRG 229
Query: 142 HFSNDDG--TELVRLASRCLQYEPRERP 167
+ T+ L R L P +R
Sbjct: 230 KYRIPFYMSTDCENLLKRFLVLNPIKRG 257
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 9e-06
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 21/144 (14%)
Query: 30 LAQALDYCSSKGRALYH-DLNTYRILFDQD-GNPRLSCFGLMKNSRDGKSYST---NLAF 84
+ +A+ +C + G + H D+ IL D + G +L FG +D Y+ +
Sbjct: 158 VLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVY 214
Query: 85 TPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 143
+PPE++R R + V+S G LL D++ G IP H ++IRG+ F
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHDEEIIRGQVFF-------RQRV 266
Query: 144 SNDDGTELVRLASRCLQYEPRERP 167
S +E L CL P +RP
Sbjct: 267 S----SECQHLIRWCLALRPSDRP 286
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 9e-06
Identities = 36/180 (20%), Positives = 57/180 (31%), Gaps = 34/180 (18%)
Query: 30 LAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF---- 84
+A+ + + + H DL +L G +L FG YS +
Sbjct: 145 TCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALV 204
Query: 85 --------TP----PE--YLRTGRVIPESV-VYSFGTLLLDLLSGKHIPP---SHALDLI 126
TP PE L + I E +++ G +L L +H P L ++
Sbjct: 205 EEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQH--PFEDGAKLRIV 262
Query: 127 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 186
GK + + T L LQ P ER + +V L + V
Sbjct: 263 NGK-YSIPPHD----TQY----TVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 28/163 (17%)
Query: 26 VALYLAQ---ALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 81
V Y Q AL++ S+ + H D+ + G +L GL + + + +
Sbjct: 138 VWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS 195
Query: 82 LAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS 137
L TP PE + +S ++S G LL ++ + + P + N L
Sbjct: 196 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFYG----DKMNLYSLCKK 249
Query: 138 CLEG--------HFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
+ H+S EL +L + C+ +P +RP+ +
Sbjct: 250 IEQCDYPPLPSDHYSE----ELRQLVNMCINPDPEKRPDVTYV 288
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Length = 162 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-05
Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 17/122 (13%)
Query: 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYT---HFIDGGTMVSP--------------TV 289
D+++ +++G+ F KD+ AI+ Y +D + +
Sbjct: 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPL 65
Query: 290 FARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTN 349
+A CYL EA + + A + +A A ++A+E LK
Sbjct: 66 YANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLR 125
Query: 350 LE 351
Sbjct: 126 NH 127
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 13/89 (14%), Positives = 27/89 (30%), Gaps = 6/89 (6%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP--TVFARRCLCYLLSDMPQEALGDAMQA 313
K G+ ++A+ F AIE Y + + T R + A+ A
Sbjct: 9 KAEGNKFYKARQFDEAIEHYNKAWE----LHKDITYLNNRAAAEYEKGEYETAISTLNDA 64
Query: 314 QVISPDWPTAFYLQAAALFGLGMNNDAQE 342
+ + + + + +G
Sbjct: 65 VEQGREMRADYKVISKSFARIGNAYHKLG 93
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 3e-05
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 9/92 (9%)
Query: 258 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFAR----RCLCYLLSDMPQEALGDAMQA 313
G F D+P A++ YT I +P AR R EA+ D +A
Sbjct: 145 EGKEYFTKSDWPNAVKAYTEMIK----RAPE-DARGYSNRAAALAKLMSFPEAIADCNKA 199
Query: 314 QVISPDWPTAFYLQAAALFGLGMNNDAQETLK 345
P++ A+ +A A + A ETL
Sbjct: 200 IEKDPNFVRAYIRKATAQIAVKEYASALETLD 231
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 27/147 (18%)
Query: 30 LAQALDYCSSKGRALYH-DL---NTYRILFDQD-GNPRLSCFGLMKNSRDGKSYST---N 81
+ A+ +C S+G + H D+ N IL D G +L FG D Y+
Sbjct: 148 VVAAIQHCHSRG--VVHRDIKDEN---ILIDLRRGCAKLIDFGSGALLHDEP-YTDFDGT 201
Query: 82 LAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE 140
++PPE++ + + V+S G LL D++ G IP +++ +
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCG-DIPFERDQEILEAELHF-------P 253
Query: 141 GHFSNDDGTELVRLASRCLQYEPRERP 167
H S + L RCL +P RP
Sbjct: 254 AHVS----PDCCALIRRCLAPKPSSRP 276
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 32/155 (20%), Positives = 58/155 (37%), Gaps = 28/155 (18%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST 80
R A ++ + AL YC + + H D+ +L G +++ FG ++ + +
Sbjct: 115 RSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTM 172
Query: 81 --NLAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS 137
L + PPE + G+ E V ++ G L + L G PP + +
Sbjct: 173 CGTLDYLPPEMIE-GKTHDEKVDLWCAGVLCYEFLVGM--PPFDS------PSHTETHRR 223
Query: 138 CLEG------HFSNDDGTELVRLASRCLQYEPRER 166
+ S L S+ L+Y P +R
Sbjct: 224 IVNVDLKFPPFLS----DGSKDLISKLLRYHPPQR 254
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 3e-05
Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 30/162 (18%)
Query: 30 LAQALDYCSSKGRALYH-DLNTYRILF---DQDGNPR--LSCFGLMKNSRDGKSYSTNLA 83
L + S + H DL + IL + G + +S FGL K G+ + +
Sbjct: 127 TTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 84 F---TP----PEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRG 128
T PE L ++S G + ++S P A L+
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGA 244
Query: 129 KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAK 170
+ L H + L + + +P++RP+AK
Sbjct: 245 CSLDCL-------HPEKHEDVIARELIEKMIAMDPQKRPSAK 279
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 25/158 (15%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDL---NTYRILFDQDGNPRLSCFGLMKNSRDGKSY 78
V +Y+ + AL++ G +Y D+ N IL D +G+ L+ FGL K ++
Sbjct: 160 EVQIYVGEIVLALEHLHKLG-IIYRDIKLEN---ILLDSNGHVVLTDFGLSKEFVADETE 215
Query: 79 STNLAF--TP----PEYLRTGRVIPESVV--YSFGTLLLDLLSGKHIPPSHALDLIRGKN 130
F T P+ +R G + V +S G L+ +LL+G P +
Sbjct: 216 RAY-DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVDG--EKNS 270
Query: 131 FLMLMDSCLEG--HFSNDDGTELVRLASRCLQYEPRER 166
+ L+ + + L R L +P++R
Sbjct: 271 QAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 4e-05
Identities = 33/217 (15%), Positives = 70/217 (32%), Gaps = 42/217 (19%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-------DLNTYRI 53
+L +L + + +R+ L +A L + + DL + I
Sbjct: 88 HEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI 144
Query: 54 LFDQDGNPRLSCFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESV----- 100
L ++G ++ GL +++ + T PE L + +
Sbjct: 145 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD-ETIQVDCFDSYKR 203
Query: 101 --VYSFGTLLLDLLSGKH---IPPSHAL---DLIRGKNFLMLMDS--CLEG-------HF 143
+++FG +L ++ I + D++ M C++ +
Sbjct: 204 VDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRW 263
Query: 144 SNDDGT-ELVRLASRCLQYEPRERPNAKSLVASLTPL 179
+D L +L C P R A + +LT +
Sbjct: 264 FSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 5e-05
Identities = 36/176 (20%), Positives = 66/176 (37%), Gaps = 32/176 (18%)
Query: 30 LAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSR-------------DG 75
+ + L+ +KG H DL IL +G P L G M + D
Sbjct: 143 ICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDW 200
Query: 76 KSYSTNLAFTPPE--YLRTGRVIPESV-VYSFGTLLLDLLSGKH-----IPPSHALDLIR 127
+ +++ PE +++ VI E V+S G +L ++ G+ ++ L
Sbjct: 201 AAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260
Query: 128 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 183
+ S+ L +L + + +P +RP+ L++ L LQ A
Sbjct: 261 QNQLSIPQSP----RHSSA----LWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 6e-05
Identities = 11/92 (11%), Positives = 26/92 (28%), Gaps = 7/92 (7%)
Query: 257 KRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFA---RRCLCYLLSDMPQEALGDAMQA 313
G ++A + A + + + C + ++AL
Sbjct: 23 ALGFNQYQAGKWDDAQKIFQALCM----LDHYDARYFLGLGACRQSLGLYEQALQSYSYG 78
Query: 314 QVISPDWPTAFYLQAAALFGLGMNNDAQETLK 345
++ + P + A LG + A+
Sbjct: 79 ALMDINEPRFPFHAAECHLQLGDLDGAESGFY 110
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 6e-05
Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 18/152 (11%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 81
+ Y A+ L++ ++ +Y DL IL D+ G+ R+S GL + K ++
Sbjct: 293 DMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-- 349
Query: 82 LAFTP----PEYLRTGRVIPESVVY-SFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 136
T PE L+ G S + S G +L LL G P K+ +
Sbjct: 350 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH--SPFRQHK---TKDKHEIDR 404
Query: 137 SCLEG--HFSNDDGTELVRLASRCLQYEPRER 166
L + EL L LQ + R
Sbjct: 405 MTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 8e-05
Identities = 44/197 (22%), Positives = 73/197 (37%), Gaps = 30/197 (15%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DL---NTYRILFD 56
+ L E ++ +++ A ++Y SK H DL N L
Sbjct: 194 VQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARN---CLVT 247
Query: 57 QDGNPRLSCFGLMKNSRDGKSYSTNLAF------TPPEYLRTGRVIPESVVYSFGTLLLD 110
+ ++S FG+ + DG ++ T PE L GR ES V+SFG LL +
Sbjct: 248 EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 111 LLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRE 165
S P + + L + C + + RL +C YEP +
Sbjct: 308 TFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPD---------AVFRLMEQCWAYEPGQ 358
Query: 166 RPNAKSLVASLTPLQKE 182
RP+ ++ L ++K
Sbjct: 359 RPSFSTIYQELQSIRKR 375
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 8e-05
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 25/157 (15%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDL---NTYRILFDQDGNPRLSCFGLMKNSRDGKSY 78
V L++ + ALDY ++ ++ D+ N IL D+ G+ ++ F +
Sbjct: 116 TVKLFICELVMALDYLQNQR-IIHRDMKPDN---ILLDEHGHVHITDFNIAAMLPRETQI 171
Query: 79 STNLAFTP----PEYLRTGRVIPESVV---YSFGTLLLDLLSGKHIPPSHALDLIRGKNF 131
+T +A T PE + + S +S G +LL G+ P H +
Sbjct: 172 TT-MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR--RPYHIRS---STSS 225
Query: 132 LMLMDSCLEG--HFSNDDGTELVRLASRCLQYEPRER 166
++ + + + E+V L + L+ P +R
Sbjct: 226 KEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 35/160 (21%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYST 80
R Y A+ ALDY S+ +Y DL ++ D+DG+ +++ FGL K +DG + T
Sbjct: 249 RARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 308
Query: 81 NLAF--TPPEYLRTGRVIPESVVY----------SFGTLLLDLLSGKHIPPSHALDLIRG 128
F T PEYL PE + G ++ +++ G+ P
Sbjct: 309 ---FCGT-PEYL-----APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LP------FYN 351
Query: 129 KNFLMLMDSCLEG--HFSNDDGTELVRLASRCLQYEPRER 166
++ L + L F G E L S L+ +P++R
Sbjct: 352 QDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQR 391
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 2e-04
Identities = 49/201 (24%), Positives = 77/201 (38%), Gaps = 25/201 (12%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDG 59
M +L L + ++ V +A +A + Y H DL IL ++
Sbjct: 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENL 317
Query: 60 NPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDLLSG 114
+++ FGL + D + + A +T PE GR +S V+SFG LL +L +
Sbjct: 318 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 377
Query: 115 KHIP-----PSHALDLIRGKNFLMLM-DSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 168
+P LD + + + M C E L L +C + EP ERP
Sbjct: 378 GRVPYPGMVNREVLDQVE-RGYRMPCPPECPE---------SLHDLMCQCWRKEPEERPT 427
Query: 169 AKSLVASLTPLQKEAEVPSYT 189
+ L A L + P Y
Sbjct: 428 FEYLQAFLEDY-FTSTEPQYQ 447
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 32/158 (20%)
Query: 30 LAQALDYCSSKGRALYH-DLNTYRILF---DQDGNPRLSCFGLMKNSRDGKSYSTNLAFT 85
+ + Y + H DL +L +D N R+ FGL + K T
Sbjct: 135 VLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD-KIGT 191
Query: 86 P----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 141
PE L G + V+S G +L LLSG PP + G N ++ +G
Sbjct: 192 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGC--PPFN------GANEYDILKKVEKG 242
Query: 142 HFS---------NDDGTELVRLASRCLQYEPRERPNAK 170
++ ++ +L+R + L Y P R +A+
Sbjct: 243 KYTFELPQWKKVSESAKDLIR---KMLTYVPSMRISAR 277
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 2e-04
Identities = 49/201 (24%), Positives = 77/201 (38%), Gaps = 25/201 (12%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDG 59
M +L L + ++ V +A +A + Y H DL IL ++
Sbjct: 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENL 400
Query: 60 NPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDLLSG 114
+++ FGL + D + + A +T PE GR +S V+SFG LL +L +
Sbjct: 401 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 460
Query: 115 KHIP-----PSHALDLIRGKNFLMLM-DSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 168
+P LD + + + M C E L L +C + EP ERP
Sbjct: 461 GRVPYPGMVNREVLDQVE-RGYRMPCPPECPE---------SLHDLMCQCWRKEPEERPT 510
Query: 169 AKSLVASLTPLQKEAEVPSYT 189
+ L A L + P Y
Sbjct: 511 FEYLQAFLEDY-FTSTEPQYQ 530
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 41/193 (21%), Positives = 72/193 (37%), Gaps = 26/193 (13%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDG 59
M +L +L + ++ +L + +A++Y H DL +L +D
Sbjct: 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDN 326
Query: 60 NPRLSCFGLMKNSRDGKSYSTNLAF----TPPEYLRTGRVIPESVVYSFGTLLLDLLS-G 114
++S FGL +++ S T PE LR + +S V+SFG LL ++ S G
Sbjct: 327 VAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 383
Query: 115 KH----IPPSHALDLIRGKNFLMLM-DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 169
+ IP + + K + M D C + + C + RP
Sbjct: 384 RVPYPRIPLKDVVPRVE-KGYKMDAPDGCPP---------AVYDVMKNCWHLDAATRPTF 433
Query: 170 KSLVASLTPLQKE 182
L L ++
Sbjct: 434 LQLREQLEHIRTH 446
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 31/158 (19%), Positives = 62/158 (39%), Gaps = 32/158 (20%)
Query: 30 LAQALDYCSSKGRALYH-DLNTYRILF---DQDGNPRLSCFGLMKNSRDGKSYSTNLAFT 85
+ + Y + H DL +L ++D ++ FGL + K T
Sbjct: 145 VLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE-RLGT 201
Query: 86 P----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 141
PE LR + + V+S G +L LL+G PP G+ ++ +G
Sbjct: 202 AYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGY--PP------FGGQTDQEILRKVEKG 252
Query: 142 HFS---------NDDGTELVRLASRCLQYEPRERPNAK 170
++ ++ +L++ + LQ++ + R +A+
Sbjct: 253 KYTFDSPEWKNVSEGAKDLIK---QMLQFDSQRRISAQ 287
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 3e-04
Identities = 37/161 (22%), Positives = 54/161 (33%), Gaps = 34/161 (21%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYH-DL---NTYRILFDQDGNPRLSCFGL-MKNSRDGK 76
YL Q Y + H DL N + ++D ++ FGL K DG+
Sbjct: 116 EARYYLRQIVLGCQYLHRNR--VIHRDLKLGN---LFLNEDLEVKIGDFGLATKVEYDGE 170
Query: 77 SYSTN---LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL------IR 127
+ PE L E V+S G ++ LL GK PP L I+
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFETSCLKETYLRIK 228
Query: 128 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 168
+ + H + L + LQ +P RP
Sbjct: 229 KNEYSI------PKHIN----PVAASLIQKMLQTDPTARPT 259
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 40/158 (25%), Positives = 56/158 (35%), Gaps = 32/158 (20%)
Query: 30 LAQALDYCSSKGRALYH-DLNTYRILF---DQDGNPRLSCFGLMKNSRDGKSYSTNLAFT 85
+ A+ YC + H DL LF D +L FGL + GK T T
Sbjct: 115 VLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT-KVGT 171
Query: 86 P----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 141
P P+ L G PE +S G ++ LL G PP +M EG
Sbjct: 172 PYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGY--PPFS------APTDSEVMLKIREG 222
Query: 142 HFS---------NDDGTELVRLASRCLQYEPRERPNAK 170
F+ + L+R R L P++R +
Sbjct: 223 TFTFPEKDWLNVSPQAESLIR---RLLTKSPKQRITSL 257
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 40/164 (24%)
Query: 30 LAQALDYCSSKGRALYH-DL---NTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFT 85
L + + + H DL N IL D D N +L+ FG G+ + T
Sbjct: 133 LLEVICALHKLN--IVHRDLKPEN---ILLDDDMNIKLTDFGFSCQLDPGEKLRE-VCGT 186
Query: 86 P----PEYLRTGRVI------PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM 135
P PE + E ++S G ++ LL+G PP + ++++
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFW------HRKQMLML 238
Query: 136 DSCLEGHFS---------NDDGTELVRLASRCLQYEPRERPNAK 170
+ G++ +D +LV R L +P++R A+
Sbjct: 239 RMIMSGNYQFGSPEWDDYSDTVKDLVS---RFLVVQPQKRYTAE 279
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 4e-04
Identities = 38/167 (22%), Positives = 63/167 (37%), Gaps = 22/167 (13%)
Query: 30 LAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA----- 83
L+ AL Y SK H D+ +L + +L FGL + D Y +
Sbjct: 500 LSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 84 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSC 138
+ PE + R S V+ FG + ++L P + + I L + +C
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 617
Query: 139 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 185
L L ++C Y+P RP L A L+ + +E ++
Sbjct: 618 PP---------TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 655
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 4e-04
Identities = 37/161 (22%), Positives = 54/161 (33%), Gaps = 34/161 (21%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYH-DL---NTYRILFDQDGNPRLSCFGL-MKNSRDGK 76
YL Q Y + H DL N + ++D ++ FGL K DG+
Sbjct: 142 EARYYLRQIVLGCQYLHRNR--VIHRDLKLGN---LFLNEDLEVKIGDFGLATKVEYDGE 196
Query: 77 SYST---NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL------IR 127
+ PE L E V+S G ++ LL GK PP L I+
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFETSCLKETYLRIK 254
Query: 128 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 168
+ + H + L + LQ +P RP
Sbjct: 255 KNEYSI------PKHIN----PVAASLIQKMLQTDPTARPT 285
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 5e-04
Identities = 39/197 (19%), Positives = 80/197 (40%), Gaps = 24/197 (12%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDG 59
M L +L Q + + + +A ++ A++Y K H +L L ++
Sbjct: 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENH 355
Query: 60 NPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDLLSG 114
+++ FGL + + A +T PE L + +S V++FG LL ++ +
Sbjct: 356 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 415
Query: 115 KHIP-----PSHALDLIRGKNFLMLM-DSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 168
P S +L+ K++ M + C E ++ L C Q+ P +RP+
Sbjct: 416 GMSPYPGIDLSQVYELLE-KDYRMERPEGCPE---------KVYELMRACWQWNPSDRPS 465
Query: 169 AKSLVASLTPLQKEAEV 185
+ + + +E+ +
Sbjct: 466 FAEIHQAFETMFQESSI 482
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 5e-04
Identities = 36/173 (20%), Positives = 60/173 (34%), Gaps = 31/173 (17%)
Query: 11 FHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 67
FH + R Y A+ L+ + +Y DL IL D G+ R+S G
Sbjct: 273 FHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLG 331
Query: 68 LMKNSRDGKSYSTNLAF--TPPEYLRTGRVIPESVVY----------SFGTLLLDLLSGK 115
L + +G++ T Y+ PE V + G LL ++++G+
Sbjct: 332 LAVHVPEGQTIKG---RVGT-VGYM-----APEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
Query: 116 HIPPSHALDLIRGKNFLMLMDSCLEG--HFSNDDGTELVRLASRCLQYEPRER 166
P + + E +S + L S+ L +P ER
Sbjct: 383 --SPFQQRK--KKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 7e-04
Identities = 32/161 (19%), Positives = 57/161 (35%), Gaps = 38/161 (23%)
Query: 30 LAQALDYCSSKGRALYH-DL---NTYRILF---DQDGNPRLSCFGLMKNSRDGKSYSTNL 82
+ + Y + H D+ N IL + N ++ FGL
Sbjct: 155 ILSGICYLHKHN--IVHRDIKPEN---ILLENKNSLLNIKIVDFGLSSFFSKDYKLRD-R 208
Query: 83 AFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC 138
T PE L+ + + V+S G ++ LL G PP G+N ++
Sbjct: 209 LGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGY--PP------FGGQNDQDIIKKV 259
Query: 139 LEGHFS---------NDDGTELVRLASRCLQYEPRERPNAK 170
+G + +D+ EL++ L Y+ +R A+
Sbjct: 260 EKGKYYFDFNDWKNISDEAKELIK---LMLTYDYNKRCTAE 297
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 7e-04
Identities = 33/161 (20%), Positives = 61/161 (37%), Gaps = 33/161 (20%)
Query: 30 LAQALDYCSSKGRALYH-DL---NTYRILF---DQDGNPRLSCFGLMKNSRDGKSYSTNL 82
+ +A+ Y S A H D+ N +L+ + +L+ FG K + S +T
Sbjct: 170 IGEAIQYLHSINIA--HRDVKPEN---LLYTSKRPNAILKLTDFGFAKETTSHNSLTT-P 223
Query: 83 AFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC 138
+TP PE L + ++S G ++ LL G PP ++ + +
Sbjct: 224 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY--PPFYSNHGLAISP--GMKTRI 279
Query: 139 LEGHFS---------NDDGTELVRLASRCLQYEPRERPNAK 170
G + +++ L+R L+ EP +R
Sbjct: 280 RMGQYEFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTIT 317
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 7e-04
Identities = 23/173 (13%), Positives = 43/173 (24%), Gaps = 49/173 (28%)
Query: 30 LAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA-F--- 84
+ + L Y S L H D+ I + P + ++ +
Sbjct: 124 VGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV 181
Query: 85 -----------TP----PEYLRTGRVIPESVVY-------SFGTLLLDLLSGKHIPPSHA 122
E V+ E+ + + ++ + P
Sbjct: 182 TRISSPQVEEGDSRFLANE------VLQENYTHLPKADIFALALTVVCAAGAE--PLPRN 233
Query: 123 LDL---IRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
D IR + S E L + +P RP+A +L
Sbjct: 234 GDQWHEIRQGRL-----PRIPQVLSQ----EFTELLKVMIHPDPERRPSAMAL 277
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 8e-04
Identities = 33/160 (20%), Positives = 57/160 (35%), Gaps = 34/160 (21%)
Query: 25 RVALYLAQ---ALDYCSSKGRALYH-DL---NTYRILFDQDGNPRLSCFGL-MKNSRDGK 76
++ Q + Y S G + H DL N +L ++ N +++ FGL + +
Sbjct: 113 EARHFMHQIITGMLYLHSHG--ILHRDLTLSN---LLLTRNMNIKIADFGLATQLKMPHE 167
Query: 77 SYSTN---LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL------IR 127
+ T + PE ES V+S G + LL G+ PP + +
Sbjct: 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR--PPFDTDTVKNTLNKVV 225
Query: 128 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 167
++ M S E L + L+ P +R
Sbjct: 226 LADYEM------PSFLS----IEAKDLIHQLLRRNPADRL 255
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 8e-04
Identities = 38/162 (23%), Positives = 58/162 (35%), Gaps = 34/162 (20%)
Query: 30 LAQALDYCSSKGRALYH-DL---NTYRILF-DQDGNP---RLSCFGLMKNSRDGKSYSTN 81
+ + ++Y ++G H DL N IL+ D+ GNP R+ FG K R
Sbjct: 125 ITKTVEYLHAQGVV--HRDLKPSN---ILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179
Query: 82 LAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS 137
+T PE L ++S G LL +L+G P ++
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG--YTPFANG---PDDTPEEILAR 234
Query: 138 CLEGHFSNDDGT---------ELVRLASRCLQYEPRERPNAK 170
G FS G +LV + L +P +R A
Sbjct: 235 IGSGKFSLSGGYWNSVSDTAKDLVS---KMLHVDPHQRLTAA 273
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 8e-04
Identities = 38/161 (23%), Positives = 62/161 (38%), Gaps = 27/161 (16%)
Query: 32 QALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL---MKNSRDGKSYSTNLAF--TP 86
+ L+Y G+ ++ D+ IL +DG+ +++ FG+ + D F TP
Sbjct: 132 EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 87 ----PEYLRTGRVIPESVVY-------SFGTLLLDLLSGK----HIPPSHALDLIRGKNF 131
PE V+ + Y SFG ++L +G PP L L +
Sbjct: 191 CWMAPE------VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP 244
Query: 132 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
L + G ++ S CLQ +P +RP A L
Sbjct: 245 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 8e-04
Identities = 31/166 (18%), Positives = 52/166 (31%), Gaps = 40/166 (24%)
Query: 30 LAQALDYCSSKGRALYH-DL---NTYRILFDQDGNPRLSCFGLMKNSRDGKSYST--NLA 83
+ + Y ++ + + H D+ N IL D++G +LS FG + D K +
Sbjct: 160 VLNSFSYIHNE-KNICHRDVKPSN---ILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYE 215
Query: 84 FTPPEYLRTGRVI--PESVVYSFGTLLLDLLSGK---------------------HIPPS 120
F PPE+ + ++S G L + P
Sbjct: 216 FMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLD 275
Query: 121 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 166
L N +C SN+ + L+ P ER
Sbjct: 276 RNHFLYPLTN---KKSTCSNNFLSNE----DIDFLKLFLRKNPAER 314
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 8e-04
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 14/110 (12%)
Query: 85 TPPEYLRTGRVIPESVVYSFGTLLLDLLS-GK----HIPPSHALDLIRGKNFLMLMDSCL 139
E L S V++FG + ++++ G+ I + + + G N L C+
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECM 265
Query: 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYT 189
E E+ L +C +P++RP+ L L + V S +
Sbjct: 266 E---------EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS 306
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 357 | |||
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.98 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.98 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.98 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.98 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.98 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.98 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.98 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.98 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.98 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.98 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.98 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.98 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.98 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.98 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.98 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.98 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.98 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.98 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.98 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.98 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.98 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.98 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.98 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.98 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.98 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.98 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.98 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.98 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.98 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.98 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.98 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.98 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.98 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.98 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.98 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.98 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.97 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.97 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.97 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.97 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.97 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.97 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.97 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.97 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.97 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.97 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.97 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.97 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.97 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.97 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.97 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.97 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.97 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.97 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.97 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.97 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.97 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.97 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.97 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.97 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.97 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.97 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.97 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.97 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.97 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.97 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.97 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.97 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.97 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.97 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.97 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.97 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.97 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.97 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.97 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.97 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.97 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.97 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.97 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.97 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.97 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.97 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.97 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.97 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.97 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.97 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.97 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.97 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.97 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.97 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.97 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.97 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.97 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.97 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.97 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.97 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.97 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.97 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.97 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.97 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.97 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.97 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.97 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.97 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.97 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.97 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.97 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.97 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.97 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.97 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.97 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.97 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.97 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.97 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.97 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.97 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.97 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.97 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.97 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.97 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.97 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.97 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.97 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.97 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.97 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.97 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.97 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.97 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.97 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.97 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.97 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.97 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.97 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.97 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.97 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.97 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.97 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.97 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.97 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.97 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.97 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.97 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.97 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.97 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.97 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.97 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.97 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.97 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.97 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.97 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.97 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.97 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.96 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.96 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.96 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.96 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.96 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.96 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.96 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.96 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.96 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.96 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.96 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.96 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.96 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.94 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.93 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.89 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.87 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.84 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.81 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.79 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.78 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.77 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.75 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.74 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.74 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.74 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.73 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.69 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.67 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.66 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.66 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.65 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.65 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.65 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.65 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.64 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.64 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.63 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.63 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.63 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.62 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.62 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.62 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.61 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.61 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.61 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.61 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.61 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.61 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.6 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.6 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.6 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.59 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.59 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.56 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.56 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.53 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.53 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.53 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.52 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.52 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.52 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.51 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.51 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.5 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.48 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.48 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.46 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.46 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.46 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.45 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.44 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.43 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.43 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.42 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.41 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.41 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.41 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.41 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.4 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.4 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.4 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.39 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.39 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.39 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.38 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.37 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.37 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.37 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.37 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.37 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.37 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.36 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.36 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.36 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.35 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.35 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.35 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.35 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.34 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.34 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.34 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.34 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.33 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.33 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.33 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.33 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.32 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.32 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.32 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.31 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.31 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.31 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.31 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.3 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.3 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.3 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.29 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.27 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.27 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.27 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.27 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.27 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.26 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.24 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.23 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.22 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.21 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.2 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.2 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.19 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.19 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.19 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.18 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.18 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.17 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.17 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.17 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.16 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.14 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.14 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.14 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.14 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.13 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.13 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.13 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.13 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.13 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.13 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.12 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.12 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.11 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.11 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.11 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.1 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.1 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.09 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.09 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.09 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.09 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.08 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 99.07 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 99.07 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.07 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.07 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 99.07 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 99.06 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.06 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 99.06 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 99.06 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.06 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.06 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 99.05 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.05 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.04 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.04 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 99.03 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.03 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.02 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 99.02 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.01 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.01 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.01 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.01 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 99.0 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 99.0 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.99 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.99 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.99 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.97 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.92 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.92 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.89 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.88 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.88 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.88 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.87 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.85 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.83 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.83 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.81 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.8 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.79 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 98.78 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.78 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.77 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.76 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.73 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.72 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.72 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.69 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.66 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.62 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.62 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.58 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.52 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.46 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.45 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.42 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.41 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.39 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.34 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.32 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.26 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.25 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 98.16 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.15 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.13 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.12 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.07 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 98.05 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.04 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.94 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.94 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.86 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.78 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.76 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.71 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.67 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.67 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.64 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.62 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 97.62 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 97.62 | |
| 2ff4_A | 388 | Probable regulatory protein EMBR; winged-helix, te | 97.38 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.37 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.36 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.24 | |
| 4e6h_A | 679 | MRNA 3'-END-processing protein RNA14; HAT domain, | 96.97 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 96.9 | |
| 4e6h_A | 679 | MRNA 3'-END-processing protein RNA14; HAT domain, | 96.89 | |
| 4gns_B | 754 | Protein CSD3, chitin biosynthesis protein CHS6; FN | 96.88 | |
| 4h7y_A | 161 | Dual specificity protein kinase TTK; mitotic check | 96.75 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 96.49 | |
| 1zbp_A | 273 | Hypothetical protein VPA1032; alpha-beta protein, | 96.32 | |
| 4gns_B | 754 | Protein CSD3, chitin biosynthesis protein CHS6; FN | 96.26 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 96.19 | |
| 1zbp_A | 273 | Hypothetical protein VPA1032; alpha-beta protein, | 95.59 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 95.58 | |
| 4g26_A | 501 | Pentatricopeptide repeat-containing protein AT2G3 | 95.37 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 95.33 | |
| 1ya0_A | 497 | SMG-7 transcript variant 2; alpha-helical repeat, | 95.09 | |
| 3kae_A | 242 | CDC27, possible protein of nuclear scaffold; tetra | 94.89 | |
| 2uy1_A | 493 | Cleavage stimulation factor 77; RNA-binding protei | 94.78 | |
| 2uy1_A | 493 | Cleavage stimulation factor 77; RNA-binding protei | 94.68 |
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-46 Score=367.50 Aligned_cols=333 Identities=19% Similarity=0.121 Sum_probs=207.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCcccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST 80 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~g 80 (357)
|+||+|.+++. ..+++.+++.|+.||+.||.|||+++ ||||||||+|||++.+ .+||+|||+++.........|
T Consensus 166 ~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~~~~~g 239 (681)
T 2pzi_A 166 VGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGYLYG 239 (681)
T ss_dssp CCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEETTCCSCCCC
T ss_pred CCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhcccCCccCC
Confidence 57899998873 27999999999999999999999999 9999999999999975 899999999998877777889
Q ss_pred CCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhcc
Q 018381 81 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 160 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 160 (357)
|+.|+|||++.++ ++.++|||||||++|+|++|..|+...... . . .........++.+.++|.+||+
T Consensus 240 t~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~--------~-~---~~~~~~~~~~~~l~~li~~~l~ 306 (681)
T 2pzi_A 240 TPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD--------G-L---PEDDPVLKTYDSYGRLLRRAID 306 (681)
T ss_dssp CTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS--------S-C---CTTCHHHHHCHHHHHHHHHHTC
T ss_pred CccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc--------c-c---cccccccccCHHHHHHHhhhcc
Confidence 9999999999765 488999999999999999998765432100 0 0 0101112345789999999999
Q ss_pred CCCCCCCC-HHHHHHHhCccccc-----cCCCcccccCCCCCCCCC-CCcccc--------------------------C
Q 018381 161 YEPRERPN-AKSLVASLTPLQKE-----AEVPSYTLMGIPHGTAST-KQTITL--------------------------T 207 (357)
Q Consensus 161 ~~p~~Rps-~~~v~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~--------------------------~ 207 (357)
.||.+||+ ++++...|..+... ...+............+. ....-. .
T Consensus 307 ~dP~~R~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 386 (681)
T 2pzi_A 307 PDPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRPGLSTIFSPSRSTFGVDLLVAHTDVYLDGQVHAEKLTANEIVTALSV 386 (681)
T ss_dssp SSGGGSCSSHHHHHHHHHHHHHHHHHHHHSCCCCCCCSSBCCCSSCCSSSHHHHGGGHHHHCCCCCCCCCHHHHHHHSCC
T ss_pred CChhhCCCHHHHHHHHHHHHHHHhhccccCCCCCcccccCCcccccccchhhhhhcccccccccccccCCHHHHHhhCCC
Confidence 99999985 55565555543221 111111100000000000 000000 0
Q ss_pred ccccc----------cccchhHHHHHHHHhhc--------CCCchhhHh------------------HhhhhhhhHHHHH
Q 018381 208 PLGEA----------CSRLDLTAIHEILEKVG--------YKDDEGIAN------------------ELSFQMWTDQIQE 251 (357)
Q Consensus 208 ~~~~~----------~~~~~~~~~~~il~~~~--------~~~~~~~~~------------------~l~~~~~~~~~~~ 251 (357)
|...+ ....+.......+.+.- ..++..... ..........+.+
T Consensus 387 p~~~p~~~~a~~~~a~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~ 466 (681)
T 2pzi_A 387 PLVDPTDVAASVLQATVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWR 466 (681)
T ss_dssp BCCCTTSTTHHHHHHTTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC
T ss_pred ccCCCCCcchHHhhcccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcch
Confidence 00000 00111111112222111 111110000 0000000112333
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
...+...|..++..|+|++|+..|+++++++|+ +..+|+++|.++..+|++++ +..|++|++++|+++.+|+++|.++
T Consensus 467 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~ 544 (681)
T 2pzi_A 467 WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARAR 544 (681)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHH
Confidence 445566666677777777777777777777776 67777777777777777777 7777777777777777777777777
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 018381 332 FGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
..+|++++|+++|+++++++|++
T Consensus 545 ~~~g~~~~A~~~~~~al~l~P~~ 567 (681)
T 2pzi_A 545 SAEGDRVGAVRTLDEVPPTSRHF 567 (681)
T ss_dssp HHTTCHHHHHHHHHTSCTTSTTH
T ss_pred HHcCCHHHHHHHHHhhcccCccc
Confidence 77777777777777777777764
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-44 Score=316.99 Aligned_cols=180 Identities=20% Similarity=0.238 Sum_probs=142.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
|+||||.++|.. .+..++|.+++.|+.||++||.|||+++ ||||||||+||||+.++.+||+|||+|+.....
T Consensus 113 ~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~ 190 (307)
T 3omv_A 113 CEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp CSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC---------
T ss_pred CCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccCCccee
Confidence 689999999953 4578999999999999999999999999 999999999999999999999999999865421
Q ss_pred -CccccCCCCCCcccccc---CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
.+..||+.|||||++.+ ++++.++|||||||++|||+||+.||............+............+..+++.+
T Consensus 191 ~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l 270 (307)
T 3omv_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAM 270 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHH
T ss_pred ecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHH
Confidence 24579999999999964 46899999999999999999999998753211111001111111111123456788899
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 152 VRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+||.+||+.||++|||+.+|+++|+.++..
T Consensus 271 ~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 271 KRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 9999999999999999999999999877643
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=312.49 Aligned_cols=176 Identities=15% Similarity=0.117 Sum_probs=144.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-CeEEecCCcccccCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~---- 75 (357)
|+||+|.++|. ..+++++.++..++.||+.||.|||+++ ||||||||+||||+.+| .+||+|||+|+.....
T Consensus 132 ~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 132 LEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 68999999995 4568999999999999999999999999 99999999999999988 5999999999865432
Q ss_pred -----CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccccccc-ccCCCCChhhHH
Q 018381 76 -----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS-CLEGHFSNDDGT 149 (357)
Q Consensus 76 -----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 149 (357)
.+.+||+.|||||++.+..++.++|||||||++|||++|+.||...... ..+..+... .....+++.+++
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~~s~ 284 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG----PLCLKIASEPPPIREIPPSCAP 284 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS----CCHHHHHHSCCGGGGSCTTSCH
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH----HHHHHHHcCCCCchhcCccCCH
Confidence 2357999999999999999999999999999999999999998653211 111111111 111234567888
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
.+.++|.+||+.||++|||+.+++++|.......
T Consensus 285 ~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 285 LTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999987765543
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-43 Score=311.43 Aligned_cols=174 Identities=18% Similarity=0.232 Sum_probs=145.4
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
|+||||.++|..+. ...++|.+++.|+.||++||.|||+++ ||||||||+||||++++.+||+||
T Consensus 111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~~Ki~DF 189 (308)
T 4gt4_A 111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNVKISDL 189 (308)
T ss_dssp CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCS
T ss_pred CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCCEEECCc
Confidence 68999999996421 246999999999999999999999999 999999999999999999999999
Q ss_pred CcccccCC------CCccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRD------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++.... .....||+.|||||++.++.++.++|||||||++|||+| |..||.+.....+ ...+....
T Consensus 190 Glar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~-----~~~i~~~~ 264 (308)
T 4gt4_A 190 GLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV-----VEMIRNRQ 264 (308)
T ss_dssp CCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHH-----HHHHHTTC
T ss_pred ccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCC
Confidence 99985432 234568999999999999999999999999999999998 8888876432222 11222222
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
..+.|..+++.+.+||.+||+.||++||||.+|+++|+.+.
T Consensus 265 ~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 265 VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 33456778899999999999999999999999999998653
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=312.14 Aligned_cols=176 Identities=22% Similarity=0.252 Sum_probs=141.5
Q ss_pred CCCCchhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCC
Q 018381 1 MPNETLSKHLFHW-------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 67 (357)
Q Consensus 1 ~~~gsL~~~l~~~-------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg 67 (357)
|+||||.++|... ..++++|.+++.|+.||++||.|||+++ ||||||||+||||+.++.+||+|||
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki~DFG 203 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGDFG 203 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEEcccc
Confidence 6899999999642 1357999999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccC
Q 018381 68 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLE 140 (357)
Q Consensus 68 ~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (357)
+++..... ....||+.|||||++.+..++.++|||||||++|||+| |+.||......... ..+....+
T Consensus 204 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~-----~~i~~g~~ 278 (329)
T 4aoj_A 204 MSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-----DCITQGRE 278 (329)
T ss_dssp ----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHH-----HHHHHTCC
T ss_pred cceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHcCCC
Confidence 99865332 23568999999999999999999999999999999999 89888764322211 11112223
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 141 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 141 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+.|..+++++.+||.+||+.||++|||+.+|+++|+.+.+.
T Consensus 279 ~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 279 LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 345677889999999999999999999999999999887654
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-43 Score=310.42 Aligned_cols=176 Identities=21% Similarity=0.246 Sum_probs=146.6
Q ss_pred CCCCchhhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcc
Q 018381 1 MPNETLSKHLFHW-----------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 69 (357)
Q Consensus 1 ~~~gsL~~~l~~~-----------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 69 (357)
|+||||.++|... ....++|.+++.|+.||++||.|||+++ ||||||||+||||+.++.+||+|||++
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~DFGla 175 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFGMS 175 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCSCH
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECCcccc
Confidence 6899999999632 2357999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCC
Q 018381 70 KNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGH 142 (357)
Q Consensus 70 ~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
+..... ....||+.|||||++.++.++.++|||||||++|||+| |+.||.......+. ..+......+
T Consensus 176 ~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~-----~~i~~~~~~~ 250 (299)
T 4asz_A 176 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI-----ECITQGRVLQ 250 (299)
T ss_dssp HHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-----HHHHHTCCCC
T ss_pred eecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHcCCCCC
Confidence 854332 23458999999999999999999999999999999998 89888764322211 1111122234
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.|..+++++.+||.+||+.||++|||+.+|+..|+.+.+.
T Consensus 251 ~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 251 RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 5667889999999999999999999999999999887654
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-42 Score=310.81 Aligned_cols=169 Identities=18% Similarity=0.253 Sum_probs=143.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
|+||+|.++|..+.+..+++.+++.|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+..... .
T Consensus 105 ~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 183 (350)
T 4b9d_A 105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR 183 (350)
T ss_dssp CTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHH
T ss_pred CCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCccccc
Confidence 68999999997656678899999999999999999999999 999999999999999999999999999876543 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+.+||+.|||||++.+..++.++|||||||++|||++|+.||.......+... .....+ ...+..+++++.+||.
T Consensus 184 ~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~----i~~~~~-~~~~~~~s~~~~~li~ 258 (350)
T 4b9d_A 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLK----IISGSF-PPVSLHYSYDLRSLVS 258 (350)
T ss_dssp HHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHHTCC-CCCCTTSCHHHHHHHH
T ss_pred ccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH----HHcCCC-CCCCccCCHHHHHHHH
Confidence 45799999999999999999999999999999999999999876533222111 111111 1234567789999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||+.||++|||+.++++|
T Consensus 259 ~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 259 QLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp HHTCSSGGGSCCHHHHHTS
T ss_pred HHccCChhHCcCHHHHhcC
Confidence 9999999999999999986
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=313.29 Aligned_cols=176 Identities=21% Similarity=0.292 Sum_probs=146.5
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
|+||+|.++|.... +..+++.+++.|+.||++||.|||+++ ||||||||+|||++.++.+||+||
T Consensus 151 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~vKi~DF 229 (353)
T 4ase_A 151 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDF 229 (353)
T ss_dssp CTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCC
T ss_pred CCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeCCCCCEEECcc
Confidence 68999999996421 356999999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+|+...... +..||+.|||||++.++.++.++|||||||++|||+| |+.||.+..... .+...+....
T Consensus 230 Glar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~----~~~~~i~~g~ 305 (353)
T 4ase_A 230 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGT 305 (353)
T ss_dssp GGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----HHHHHHHHTC
T ss_pred hhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH----HHHHHHHcCC
Confidence 9998654332 3467899999999999999999999999999999998 898886532111 1112222233
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
+...|..+++++.++|.+||+.||++|||+.+|+++|+.+.+
T Consensus 306 ~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 306 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 345567788999999999999999999999999999987654
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=299.53 Aligned_cols=169 Identities=18% Similarity=0.234 Sum_probs=136.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCeeeCC-CCCeEEecCCcccccCCC--C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG--K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~--~ 76 (357)
|+||+|.++|. ..+.+++.++..|+.||+.||.|||+++ +||||||||+||||+. +|.+||+|||+|+..... .
T Consensus 111 ~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~ 188 (290)
T 3fpq_A 111 MTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 188 (290)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccC
Confidence 68999999995 4578999999999999999999999986 4999999999999974 899999999999865443 3
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+.+||+.|||||++. ++++.++|||||||++|||+||+.||........- ............++...++++.+||.
T Consensus 189 ~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~li~ 264 (290)
T 3fpq_A 189 AVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI---YRRVTSGVKPASFDKVAIPEVKEIIE 264 (290)
T ss_dssp ESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH---HHHHTTTCCCGGGGGCCCHHHHHHHH
T ss_pred CcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHH---HHHHHcCCCCCCCCccCCHHHHHHHH
Confidence 568999999999987 47999999999999999999999998643211100 00111111111233445678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||+.||++|||+.++++|
T Consensus 265 ~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 265 GCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHSCSSGGGSCCHHHHHTS
T ss_pred HHccCChhHCcCHHHHhcC
Confidence 9999999999999999987
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=306.67 Aligned_cols=168 Identities=20% Similarity=0.235 Sum_probs=140.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
|+||+|.+++. ++.+++.++..++.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+..... .
T Consensus 153 ~~gg~L~~~l~---~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 228 (346)
T 4fih_A 153 LEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228 (346)
T ss_dssp CTTEEHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred CCCCcHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence 68999999994 457999999999999999999999999 999999999999999999999999999865432 3
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+.+||+.|||||++.+..|+.++|||||||++|||++|+.||.+........ .+..... ........+++++.+||.
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~-~i~~~~~--~~~~~~~~~s~~~~dli~ 305 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDNLP--PRLKNLHKVSPSLKGFLD 305 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSSC--CCCSCGGGSCHHHHHHHH
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH-HHHcCCC--CCCCccccCCHHHHHHHH
Confidence 5689999999999999999999999999999999999999987643221111 0111111 111233467789999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||+.||++|||+.++++|
T Consensus 306 ~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 306 RLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp HHSCSSTTTSCCHHHHTTC
T ss_pred HHcCCChhHCcCHHHHhcC
Confidence 9999999999999999987
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=300.56 Aligned_cols=165 Identities=19% Similarity=0.234 Sum_probs=139.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.++|. ..+.+++.++..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+.....
T Consensus 114 ~~gG~L~~~i~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~ 190 (311)
T 4aw0_A 114 AKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190 (311)
T ss_dssp CTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCC
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCccc
Confidence 57999999995 4578999999999999999999999999 999999999999999999999999999865422
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
.+.+||+.|||||++.+..++.++|||||||++|+|++|+.||.......+... ..... ..++...++++.+|
T Consensus 191 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~----i~~~~--~~~p~~~s~~~~dl 264 (311)
T 4aw0_A 191 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAK----IIKLE--YDFPEKFFPKARDL 264 (311)
T ss_dssp BCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHTC--CCCCTTCCHHHHHH
T ss_pred ccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHcCC--CCCCcccCHHHHHH
Confidence 356899999999999999999999999999999999999999876533222111 11111 13455677899999
Q ss_pred HHHhccCCCCCCCCHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVA 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~ 174 (357)
|.+||+.||++|||+.+++.
T Consensus 265 i~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 265 VEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp HHHHSCSSGGGSTTSGGGTC
T ss_pred HHHHccCCHhHCcChHHHcC
Confidence 99999999999999998643
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-41 Score=298.92 Aligned_cols=166 Identities=22% Similarity=0.265 Sum_probs=138.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
|+||+|.++|. ..+.+++.++..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+.... ..
T Consensus 108 ~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 184 (304)
T 3ubd_A 108 LRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY 184 (304)
T ss_dssp CTTCEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCC
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCCcccc
Confidence 68999999995 4578999999999999999999999999 99999999999999999999999999985432 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+.+||+.|||||++.+..++.++|||||||++|||+||+.||.+......... .... ...++..+++++.+||.
T Consensus 185 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~li~ 258 (304)
T 3ubd_A 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM----ILKA--KLGMPQFLSPEAQSLLR 258 (304)
T ss_dssp SCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTSCHHHHHHHH
T ss_pred ccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHH----HHcC--CCCCCCcCCHHHHHHHH
Confidence 56899999999999999999999999999999999999999876533222111 1111 12345667889999999
Q ss_pred HhccCCCCCCCC-----HHHHHHH
Q 018381 157 RCLQYEPRERPN-----AKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps-----~~~v~~~ 175 (357)
+||+.||++||| ++++++|
T Consensus 259 ~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 259 MLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp HHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred HHcccCHHHCCCCCcCCHHHHHcC
Confidence 999999999998 4688776
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=307.48 Aligned_cols=168 Identities=20% Similarity=0.241 Sum_probs=139.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
|+||+|.+++. .+.+++.++..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+..... .
T Consensus 230 ~~gG~L~~~i~---~~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 305 (423)
T 4fie_A 230 LEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305 (423)
T ss_dssp CTTEEHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred CCCCcHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc
Confidence 68999999994 457999999999999999999999999 999999999999999999999999999865432 3
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+.+||+.|||||++.+..|+.++|||||||++|||++|+.||.+........ .+...... .......+++++.+||.
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~-~i~~~~~~--~~~~~~~~s~~~~dli~ 382 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDNLPP--RLKNLHKVSPSLKGFLD 382 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCC--CCSCTTSSCHHHHHHHH
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH-HHHcCCCC--CCcccccCCHHHHHHHH
Confidence 5689999999999999999999999999999999999999987643221111 01111111 11233456789999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||+.||++|||+.++++|
T Consensus 383 ~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 383 RLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp HHSCSSTTTSCCHHHHTTC
T ss_pred HHcCCChhHCcCHHHHhcC
Confidence 9999999999999999987
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=290.59 Aligned_cols=164 Identities=19% Similarity=0.266 Sum_probs=130.5
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+|+..... .+..
T Consensus 96 ~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~ 172 (275)
T 3hyh_A 96 GNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 172 (275)
T ss_dssp CEEHHHHHH--HSCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC-------------
T ss_pred CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCee
Confidence 689999995 4578999999999999999999999999 999999999999999999999999999865543 3568
Q ss_pred cCCCCCCccccccCCC-CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 80 TNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
||+.|||||++.+..+ +.++||||+||++|+|++|+.||.......+... ..... ..++..+++++.+||.+|
T Consensus 173 GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~----i~~~~--~~~p~~~s~~~~~li~~~ 246 (275)
T 3hyh_A 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN----ISNGV--YTLPKFLSPGAAGLIKRM 246 (275)
T ss_dssp --CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHTC--CCCCTTSCHHHHHHHHHH
T ss_pred ECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHcCC--CCCCCCCCHHHHHHHHHH
Confidence 9999999999998776 5799999999999999999999876533222111 11111 134556778999999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 018381 159 LQYEPRERPNAKSLVAS 175 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~ 175 (357)
|+.||++|||+.++++|
T Consensus 247 L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 247 LIVNPLNRISIHEIMQD 263 (275)
T ss_dssp SCSSGGGSCCHHHHHHC
T ss_pred ccCChhHCcCHHHHHcC
Confidence 99999999999999986
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=297.90 Aligned_cols=178 Identities=15% Similarity=0.193 Sum_probs=136.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CCceeecCCCCCeeeCCCCCeEEecCCccccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK--------GRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 72 (357)
|+||||.++|. ...++|.++++++.|++.||.|||++ + ||||||||+||||+.++.+||+|||+++..
T Consensus 83 ~~~gsL~~~l~---~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 83 HEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCcHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 68999999994 46799999999999999999999987 6 999999999999999999999999999854
Q ss_pred CCC--------CccccCCCCCCccccccC------CCCccccccchHHHHHHHHhCCCCCCcchhHh--h----hcC-c-
Q 018381 73 RDG--------KSYSTNLAFTPPEYLRTG------RVIPESVVYSFGTLLLDLLSGKHIPPSHALDL--I----RGK-N- 130 (357)
Q Consensus 73 ~~~--------~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~--~----~~~-~- 130 (357)
... ....||+.|||||++.+. .++.++|||||||++|||+||..|+....... + ... .
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 432 134699999999999754 35779999999999999999986653221000 0 000 0
Q ss_pred --c-ccccccccCCCCC-----hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 131 --F-LMLMDSCLEGHFS-----NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 131 --~-~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
+ ........++.++ ..++..+.+||.+||+.||++||||.+|++.|+.+...
T Consensus 239 ~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 0 0011112222222 24567899999999999999999999999999887655
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=283.32 Aligned_cols=164 Identities=19% Similarity=0.290 Sum_probs=124.8
Q ss_pred CCCCchhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----
Q 018381 1 MPNETLSKHLFHWEN-QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---- 75 (357)
++||+|.+++..+.. ...++..++.++.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+.....
T Consensus 97 ~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~ 175 (299)
T 4g31_A 97 CRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175 (299)
T ss_dssp CCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCCCC----------
T ss_pred CCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEccCccceecCCCcccc
Confidence 579999999953222 23567788999999999999999999 999999999999999999999999999865432
Q ss_pred ------------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCC
Q 018381 76 ------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 143 (357)
Q Consensus 76 ------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
.+.+||+.|||||++.+..++.++|||||||++|||++ ||...... .. .+.... ...+
T Consensus 176 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~-~~--~~~~~~----~~~~ 245 (299)
T 4g31_A 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER-VR--TLTDVR----NLKF 245 (299)
T ss_dssp ----------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH-HH--HHHHHH----TTCC
T ss_pred ccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH-HH--HHHHHh----cCCC
Confidence 13469999999999999999999999999999999996 55543211 11 001111 1122
Q ss_pred C---hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 144 S---NDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 144 ~---~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+ ...++...+||.+||+.||++|||+.++++|
T Consensus 246 p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 246 PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2 2344567899999999999999999999986
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=281.39 Aligned_cols=169 Identities=21% Similarity=0.236 Sum_probs=129.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC-CCeEEecCCcccccCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~---- 75 (357)
++||+|.+++. .+++.++..++.||+.||.|||+++ ||||||||+|||++.+ +.+||+|||+|+.....
T Consensus 102 ~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~ 175 (361)
T 4f9c_A 102 LEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIEL 175 (361)
T ss_dssp CCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGG
T ss_pred CCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccc
Confidence 57999999992 4999999999999999999999999 9999999999999876 79999999999754321
Q ss_pred ----------------------------CccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhh
Q 018381 76 ----------------------------KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI 126 (357)
Q Consensus 76 ----------------------------~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~ 126 (357)
.+.+||++|+|||++.+. .++.++||||+||++|||++|+.||.....+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~ 255 (361)
T 4f9c_A 176 LKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLT 255 (361)
T ss_dssp GGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH
T ss_pred cccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHH
Confidence 134699999999999875 478999999999999999999999864321100
Q ss_pred hcC-------------------------------cccccc------c------------cccCCCCChhhHHHHHHHHHH
Q 018381 127 RGK-------------------------------NFLMLM------D------------SCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 127 ~~~-------------------------------~~~~~~------~------------~~~~~~~~~~~~~~~~~li~~ 157 (357)
.-. ...... + ...........++++.+||.+
T Consensus 256 ~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~ 335 (361)
T 4f9c_A 256 ALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDK 335 (361)
T ss_dssp HHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHH
T ss_pred HHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHH
Confidence 000 000000 0 000001122356789999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 018381 158 CLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rps~~~v~~~ 175 (357)
||+.||++|||+.++++|
T Consensus 336 lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 336 LLDLNPASRITAEEALLH 353 (361)
T ss_dssp HTCSCTTTSCCHHHHHTS
T ss_pred HCcCChhHCcCHHHHhcC
Confidence 999999999999999987
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-37 Score=282.43 Aligned_cols=170 Identities=15% Similarity=0.223 Sum_probs=133.1
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC--------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-------- 74 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-------- 74 (357)
+|+|.++|. ..+++++.++..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++....
T Consensus 142 ~g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~ 218 (398)
T 4b99_A 142 ESDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF 218 (398)
T ss_dssp SEEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCC
T ss_pred CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeeecccCccccccc
Confidence 478999995 5678999999999999999999999999 99999999999999999999999999985432
Q ss_pred CCccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc-------ccc------------c
Q 018381 75 GKSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-------FLM------------L 134 (357)
Q Consensus 75 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~-------~~~------------~ 134 (357)
..+.+||+.|+|||++.+. .++.++||||+||++|||++|+.||.+......-... ... .
T Consensus 219 ~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~ 298 (398)
T 4b99_A 219 MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAY 298 (398)
T ss_dssp CCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHH
T ss_pred cccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhh
Confidence 2356899999999998874 5689999999999999999999998764221110000 000 0
Q ss_pred ---cccccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 135 ---MDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 135 ---~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
........ ..+..++++.+||.+||+.||++|||+.++++|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 299 IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp HHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000000 012346789999999999999999999999987
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=297.21 Aligned_cols=169 Identities=22% Similarity=0.226 Sum_probs=139.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--Ccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~ 78 (357)
|+||+|.++|. ..+.+++..+..++.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+..... .+.
T Consensus 274 ~~GGdL~~~l~--~~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~ 350 (689)
T 3v5w_A 274 MNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350 (689)
T ss_dssp CCSCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCSC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeeecCCCCCCCc
Confidence 68999999995 4578999999999999999999999999 999999999999999999999999999866543 467
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
+||+.|||||++.+ ..++.++|+|||||++|||++|..||......... ........ ....++...++++.+||.+
T Consensus 351 ~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~-~i~~~i~~--~~~~~p~~~S~~a~dLI~~ 427 (689)
T 3v5w_A 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLT--MAVELPDSFSPELRSLLEG 427 (689)
T ss_dssp CSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH-HHHHHHHH--CCCCCCTTSCHHHHHHHHH
T ss_pred cCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHhhcC--CCCCCCccCCHHHHHHHHH
Confidence 89999999999975 57899999999999999999999998754211100 00001111 1223566678899999999
Q ss_pred hccCCCCCCCC-----HHHHHHH
Q 018381 158 CLQYEPRERPN-----AKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rps-----~~~v~~~ 175 (357)
||+.||.+|++ +.+|++|
T Consensus 428 lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 428 LLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp HTCSCGGGCTTCSSSTHHHHTTS
T ss_pred HccCCHhHCCCCCCCCHHHHhcC
Confidence 99999999998 6888886
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=290.15 Aligned_cols=171 Identities=18% Similarity=0.126 Sum_probs=140.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC--CCeEEecCCcccccCCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD--GNPRLSCFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~--~~~kl~Dfg~~~~~~~~~-- 76 (357)
|+||+|.++|.. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++......
T Consensus 236 ~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~ 313 (573)
T 3uto_A 236 MSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313 (573)
T ss_dssp CCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE
T ss_pred cCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCce
Confidence 579999999953 4568999999999999999999999999 9999999999999854 889999999999766543
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
+.+||+.|||||++.+..++.++|||||||++|||++|..||.+.......... ......+.......+++++.+||
T Consensus 314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~s~~~~dli 391 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV--KSCDWNMDDSAFSGISEDGKDFI 391 (573)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH--HTTCCCCCSGGGTTSCHHHHHHH
T ss_pred eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH--HhCCCCCCcccccCCCHHHHHHH
Confidence 457999999999999999999999999999999999999998765332221110 00111111222335678899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 018381 156 SRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+||+.||.+|||+.++++|
T Consensus 392 ~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 392 RKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp HTTSCSSGGGSCCHHHHHHS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999997
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-34 Score=257.21 Aligned_cols=181 Identities=23% Similarity=0.428 Sum_probs=148.4
Q ss_pred CCCCchhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---
Q 018381 1 MPNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 75 (357)
++||+|.+++.... ...+++.+++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 117 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 195 (321)
T 2qkw_B 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDFGISKKGTELDQT 195 (321)
T ss_dssp CTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC
T ss_pred CCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 57899999995422 246999999999999999999999999 999999999999999999999999998754321
Q ss_pred ---CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhH-----------hhhcCccccccccccCC
Q 018381 76 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD-----------LIRGKNFLMLMDSCLEG 141 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 141 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ......+....++....
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (321)
T 2qkw_B 196 HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD 275 (321)
T ss_dssp CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTT
T ss_pred ccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcc
Confidence 2345899999999998889999999999999999999999887643111 11122233344444455
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 142 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 142 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
..+..++..+.+++.+||+.||++|||+.+++++|+.+...
T Consensus 276 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 276 KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 56778899999999999999999999999999999877554
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-35 Score=264.60 Aligned_cols=175 Identities=15% Similarity=0.256 Sum_probs=142.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++.. .++.+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 96 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 173 (325)
T 3kex_A 96 LPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 173 (325)
T ss_dssp CTTCBSHHHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC
T ss_pred CCCCCHHHHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCccccccc
Confidence 578999999953 4568999999999999999999999999 999999999999999999999999999865433
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
....+|+.|+|||++.++.++.++|||||||++|+|++ |..||........ ...+........+..++..+.+
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 248 (325)
T 3kex_A 174 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV-----PDLLEKGERLAQPQICTIDVYM 248 (325)
T ss_dssp -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH-----HHHHHTTCBCCCCTTBCTTTTH
T ss_pred ccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH-----HHHHHcCCCCCCCCcCcHHHHH
Confidence 23356789999999998999999999999999999999 9988765422111 1111111222334456678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
+|.+||..||.+|||+.+++++|+.+...
T Consensus 249 li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 249 VMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp HHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999887654
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=259.23 Aligned_cols=175 Identities=18% Similarity=0.215 Sum_probs=136.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCceeecCCCCCeeeCCCCCeEEecCCccccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS--------SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH--------~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 72 (357)
+++|+|.+++ ....+++..++.++.||+.||.||| +.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 88 ~~~g~L~~~l---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 163 (301)
T 3q4u_A 88 HEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGLAVMH 163 (301)
T ss_dssp CTTCBHHHHH---TTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred ccCCCHHHHH---hhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEeeCCCeeec
Confidence 4789999999 4568999999999999999999999 888 999999999999999999999999998754
Q ss_pred CCC--------CccccCCCCCCccccccC------CCCccccccchHHHHHHHHhC----------CCCCCcchh-----
Q 018381 73 RDG--------KSYSTNLAFTPPEYLRTG------RVIPESVVYSFGTLLLDLLSG----------KHIPPSHAL----- 123 (357)
Q Consensus 73 ~~~--------~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~~g----------~~~~~~~~~----- 123 (357)
... ....||+.|+|||++.+. .++.++|||||||++|||++| ..||.....
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~ 243 (301)
T 3q4u_A 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 243 (301)
T ss_dssp ETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred ccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcch
Confidence 332 234789999999999876 445789999999999999999 666643210
Q ss_pred HhhhcCcccccccccc-CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 124 DLIRGKNFLMLMDSCL-EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 124 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
..+..........+.+ ....+..+++.+.++|.+||+.||++|||+.++++.|+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 244 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred hhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1111000000001111 1112345778999999999999999999999999998764
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-35 Score=260.98 Aligned_cols=177 Identities=21% Similarity=0.323 Sum_probs=143.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 89 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 89 IKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp CTTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred cCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 578999999953 4678999999999999999999999999 9999999999999999999999999997553321
Q ss_pred --------------ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCC
Q 018381 77 --------------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 142 (357)
Q Consensus 77 --------------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..|+........ .............
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~---~~~~~~~~~~~~~ 243 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTM---DFGLNVRGFLDRY 243 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCT---TSSBCHHHHHHHT
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHH---HHhhhhhcccccc
Confidence 34689999999999999999999999999999999999987754321111 1111111112222
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+..+++.+.++|.+||..||++|||+.++++.|+.++..
T Consensus 244 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 244 CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 3456677899999999999999999999999999988765
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=264.96 Aligned_cols=176 Identities=20% Similarity=0.317 Sum_probs=143.5
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
++||+|.+++.... ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+||
T Consensus 169 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DF 247 (370)
T 2psq_A 169 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADF 247 (370)
T ss_dssp CTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCC
T ss_pred CCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECCCCCEEEccc
Confidence 57899999996432 246899999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++..... ....+|+.|+|||++.+..++.++|||||||++|||++ |..||.......+ ...+....
T Consensus 248 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~-----~~~~~~~~ 322 (370)
T 2psq_A 248 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKEGH 322 (370)
T ss_dssp SSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-----HHHHHTTC
T ss_pred cCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHhcCC
Confidence 999855432 22346788999999999899999999999999999999 8888765422211 11112222
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
....+..++..+.++|.+||..||.+|||+.+++++|+.+...
T Consensus 323 ~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 323 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 2344566788999999999999999999999999999887543
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=267.82 Aligned_cols=176 Identities=15% Similarity=0.140 Sum_probs=133.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC---CCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~-- 75 (357)
|+||+|.+++.......+++.++..|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 141 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~ 219 (400)
T 1nxk_A 141 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 219 (400)
T ss_dssp CCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC----
T ss_pred CCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEecccccccCCCCc
Confidence 57899999996544567999999999999999999999999 999999999999997 788999999999865433
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccccccc--ccCCCCChhhHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS--CLEGHFSNDDGTELV 152 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 152 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||................... .+.......+++++.
T Consensus 220 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 299 (400)
T 1nxk_A 220 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 299 (400)
T ss_dssp -------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHH
Confidence 34578999999999998999999999999999999999999986542111000000001111 111111234678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+||.+||..||.+|||+.++++|-.
T Consensus 300 ~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 300 MLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred HHHHHHCCCChhHCcCHHHHhcCcc
Confidence 9999999999999999999999843
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-35 Score=263.54 Aligned_cols=175 Identities=13% Similarity=0.213 Sum_probs=144.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 175 (327)
T 3poz_A 98 MPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175 (327)
T ss_dssp CTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC---
T ss_pred cCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCccccc
Confidence 578999999953 4578999999999999999999999999 9999999999999999999999999998554322
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ....+........+..++..+.+
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 250 (327)
T 3poz_A 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEKGERLPQPPICTIDVYM 250 (327)
T ss_dssp ----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----HHHHHHTTCCCCCCTTBCHHHHH
T ss_pred ccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-----HHHHHHcCCCCCCCccCCHHHHH
Confidence 2345789999999999999999999999999999999 888876542221 11222222233345667789999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
++.+||+.||.+|||+.+++++|+.+...
T Consensus 251 li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 251 IMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 99999999999999999999999887654
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-34 Score=257.37 Aligned_cols=178 Identities=28% Similarity=0.480 Sum_probs=147.3
Q ss_pred CCCCchhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcC---CCceeecCCCCCeeeCCCCCeEEecCCcccccCCC
Q 018381 1 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSK---GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~---~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 75 (357)
+++|+|.+++... ....+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+++.....
T Consensus 109 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 187 (326)
T 3uim_A 109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187 (326)
T ss_dssp CTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEECTTCCEEECCCSSCEECCSS
T ss_pred ccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEECCCCCEEeccCccccccCcc
Confidence 5789999999643 234599999999999999999999999 8 999999999999999999999999999865432
Q ss_pred -----CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchh-------------HhhhcCcccccccc
Q 018381 76 -----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL-------------DLIRGKNFLMLMDS 137 (357)
Q Consensus 76 -----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-------------~~~~~~~~~~~~~~ 137 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ............+.
T Consensus 188 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (326)
T 3uim_A 188 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV 267 (326)
T ss_dssp SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCT
T ss_pred cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcCh
Confidence 234589999999999888899999999999999999999998853211 11112233344444
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 138 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 138 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
.....++...+..+.+++.+||+.||.+|||+.+++++|+..
T Consensus 268 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 268 DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred hhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 555566778889999999999999999999999999999864
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=257.16 Aligned_cols=168 Identities=17% Similarity=0.221 Sum_probs=138.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ...+++.+++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 99 ~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 99 LAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp CTTCBHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCCCCHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 57999999994 457999999999999999999999999 999999999999999999999999998765432 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..||............ ..........+...+..+.++|.
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~ 251 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI---ATNGTPELQNPEKLSAIFRDFLN 251 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHHCSCCCSCGGGSCHHHHHHHH
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhCCCCCCCCccccCHHHHHHHH
Confidence 457899999999999999999999999999999999999998654221111000 00111112234567788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||+.||++|||+.+++++
T Consensus 252 ~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 252 RCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHSCSSTTTSCCHHHHTTC
T ss_pred HHccCChhHCcCHHHHhhC
Confidence 9999999999999999987
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=262.16 Aligned_cols=178 Identities=16% Similarity=0.211 Sum_probs=138.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC----------CCceeecCCCCCeeeCCCCCeEEecCCccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK----------GRALYHDLNTYRILFDQDGNPRLSCFGLMK 70 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~----------~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 70 (357)
+++|+|.+++. ...+++.+++.++.||+.||.|||+. + |+||||||+|||++.++.+||+|||+++
T Consensus 104 ~~~g~L~~~l~---~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 104 HEKGSLSDFLK---ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp CTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEccCCccc
Confidence 47899999994 45699999999999999999999999 8 9999999999999999999999999997
Q ss_pred ccCCC------CccccCCCCCCccccccC-----CCCccccccchHHHHHHHHhCCCCCCcchhH---------------
Q 018381 71 NSRDG------KSYSTNLAFTPPEYLRTG-----RVIPESVVYSFGTLLLDLLSGKHIPPSHALD--------------- 124 (357)
Q Consensus 71 ~~~~~------~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~--------------- 124 (357)
..... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....
T Consensus 180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 259 (322)
T 3soc_A 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL 259 (322)
T ss_dssp EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence 54432 235689999999999863 4566889999999999999999887643110
Q ss_pred -hhhcCccccccccccCCC-CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 125 -LIRGKNFLMLMDSCLEGH-FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 125 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+..........+.+... ....+++.+.++|.+||+.||++|||+.++++.|+.+.+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 260 EDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 000000000011111111 1224567899999999999999999999999999887654
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=260.20 Aligned_cols=166 Identities=21% Similarity=0.297 Sum_probs=138.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 96 ~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 172 (328)
T 3fe3_A 96 ASGGEVFDYLV--AHGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA 172 (328)
T ss_dssp CTTCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGT
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcccc
Confidence 57899999995 3567999999999999999999999999 999999999999999999999999999865543 34
Q ss_pred cccCCCCCCccccccCCCC-ccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
..||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.......... .... ...+...++++.++|.
T Consensus 173 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i----~~~~--~~~p~~~s~~~~~li~ 246 (328)
T 3fe3_A 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV----LRGK--YRIPFYMSTDCENLLK 246 (328)
T ss_dssp TSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHCC--CCCCTTSCHHHHHHHH
T ss_pred ccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHH----HhCC--CCCCCCCCHHHHHHHH
Confidence 5799999999999887764 7999999999999999999998765433322211 1111 1234456788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..||.+|||+.++++|
T Consensus 247 ~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 247 RFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHCCSSTTTSCCHHHHTTC
T ss_pred HHCCCChhHCcCHHHHhcC
Confidence 9999999999999999987
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=257.92 Aligned_cols=179 Identities=21% Similarity=0.307 Sum_probs=137.0
Q ss_pred CCCCchhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCeeeCCCCCeEEecCCcccccCCC---
Q 018381 1 MPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 75 (357)
+++|+|.+++.... ...+++.+++.++.||+.||.|||+.+ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 195 (309)
T 3p86_A 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS 195 (309)
T ss_dssp CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------
T ss_pred CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccc
Confidence 57899999995321 124999999999999999999999986 3999999999999999999999999998754432
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||........... ..........+..+++.+.++
T Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~l 271 (309)
T 3p86_A 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA----VGFKCKRLEIPRNLNPQVAAI 271 (309)
T ss_dssp ------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH----HHHSCCCCCCCTTSCHHHHHH
T ss_pred cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhcCCCCCCCccCCHHHHHH
Confidence 345789999999999998899999999999999999999999875432221111 101112223456677899999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
|.+||..||.+|||+.++++.|+.+....
T Consensus 272 i~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 272 IEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999887654
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=270.21 Aligned_cols=176 Identities=20% Similarity=0.323 Sum_probs=144.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
|++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 347 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 347 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC------C
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCC
Confidence 57899999996544456899999999999999999999999 999999999999999999999999999855432 2345
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+....+...+..+++.+.++|.+|
T Consensus 348 ~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~p~~~~~~l~~li~~c 422 (450)
T 1k9a_A 348 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVEKGYKMDAPDGCPPAVYDVMKNC 422 (450)
T ss_dssp CCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT-----THHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred CCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCcCCHHHHHHHHHH
Confidence 7889999999999999999999999999999998 98887653211 11122222233445667889999999999
Q ss_pred ccCCCCCCCCHHHHHHHhCccccc
Q 018381 159 LQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
|..||.+|||+.++++.|+.+...
T Consensus 423 l~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 423 WHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cCCChhHCcCHHHHHHHHHHHHHh
Confidence 999999999999999999887654
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=260.10 Aligned_cols=175 Identities=20% Similarity=0.242 Sum_probs=142.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 132 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (325)
T 3kul_A 132 MENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209 (325)
T ss_dssp CTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCSSCEECC----CCE
T ss_pred CCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCCCCEEECCCCcccccccCcccee
Confidence 578999999943 4568999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...+|+.|+|||++.+..++.++|||||||++|+|++ |..||.......... .+........+..+++.+.
T Consensus 210 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~ 284 (325)
T 3kul_A 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS-----SVEEGYRLPAPMGCPHALH 284 (325)
T ss_dssp ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHH-----HHHTTCCCCCCTTCCHHHH
T ss_pred eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHH-----HHHcCCCCCCCCCcCHHHH
Confidence 1235678999999998889999999999999999999 988876543222211 1111222334556788999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
++|.+||..||.+|||+.++++.|+.+...
T Consensus 285 ~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 285 QLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999988765
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=257.00 Aligned_cols=166 Identities=19% Similarity=0.281 Sum_probs=139.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.... ..
T Consensus 87 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 163 (337)
T 1o6l_A 87 ANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 163 (337)
T ss_dssp CTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccCCCccc
Confidence 57899999995 4568999999999999999999999999 99999999999999999999999999985332 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+..||+.|+|||++.+..++.++|+|||||++|||++|+.||.......+.... ... ...++...++++.++|.
T Consensus 164 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i----~~~--~~~~p~~~s~~~~~li~ 237 (337)
T 1o6l_A 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI----LME--EIRFPRTLSPEAKSLLA 237 (337)
T ss_dssp CCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHC--CCCCCTTSCHHHHHHHH
T ss_pred ccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHH----HcC--CCCCCCCCCHHHHHHHH
Confidence 567899999999999989999999999999999999999998764332221111 111 11245567789999999
Q ss_pred HhccCCCCCCC-----CHHHHHHH
Q 018381 157 RCLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rp-----s~~~v~~~ 175 (357)
+||+.||.+|| ++.++++|
T Consensus 238 ~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 238 GLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHhhcCHHHhcCCCCCCHHHHHcC
Confidence 99999999999 89999987
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=255.12 Aligned_cols=178 Identities=12% Similarity=0.070 Sum_probs=141.0
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC-----eEEecCCcccccCCC--
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN-----PRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~-----~kl~Dfg~~~~~~~~-- 75 (357)
+|+|.+++.. .+..+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++. +||+|||+++.....
T Consensus 89 ~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~ 166 (298)
T 1csn_A 89 GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 166 (298)
T ss_dssp CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred CCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence 8999999953 4567999999999999999999999999 999999999999987776 999999999755432
Q ss_pred ---------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchh----HhhhcCccccccccccCCC
Q 018381 76 ---------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL----DLIRGKNFLMLMDSCLEGH 142 (357)
Q Consensus 76 ---------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 142 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ..+. .+...........
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~ 244 (298)
T 1csn_A 167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYE--RIGEKKQSTPLRE 244 (298)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHH--HHHHHHHHSCHHH
T ss_pred cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHH--HHHhhccCccHHH
Confidence 244689999999999998899999999999999999999999865310 0000 0000000000011
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccccC
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 184 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~ 184 (357)
....+++.+.++|.+||..||++|||+.+|++.|+.+.....
T Consensus 245 ~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 245 LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 123456889999999999999999999999999998876543
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=265.93 Aligned_cols=179 Identities=15% Similarity=0.165 Sum_probs=143.1
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC--CCCCeEEecCCcccccCCC-----
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~--~~~~~kl~Dfg~~~~~~~~----- 75 (357)
||+|.+++.. ..+.+++.+++.|+.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 135 g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~ 212 (364)
T 3op5_A 135 GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKA 212 (364)
T ss_dssp EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCC
T ss_pred CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccc
Confidence 7899999953 4578999999999999999999999999 99999999999998 8899999999999754322
Q ss_pred ------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhh--------cCccccccccccCC
Q 018381 76 ------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR--------GKNFLMLMDSCLEG 141 (357)
Q Consensus 76 ------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 141 (357)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.....+... ........+..+.
T Consensus 213 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 291 (364)
T 3op5_A 213 YAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFP- 291 (364)
T ss_dssp SSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSC-
T ss_pred cccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcc-
Confidence 2335899999999999988999999999999999999999998753111100 0011111111111
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccccCCC
Q 018381 142 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 186 (357)
Q Consensus 142 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~~ 186 (357)
...+++++.+++..||..+|.+||++.+|++.|+.+.......
T Consensus 292 --~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~ 334 (364)
T 3op5_A 292 --AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSK 334 (364)
T ss_dssp --TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred --cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 2345678999999999999999999999999998887765443
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-34 Score=253.38 Aligned_cols=179 Identities=15% Similarity=0.197 Sum_probs=140.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+++++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 93 ~~g~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 169 (294)
T 4eqm_A 93 IEGPTLSEYIE--SHGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT 169 (294)
T ss_dssp CCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC--------
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCcccccccccccc
Confidence 57899999995 3468999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||.................. ......+..+++.+.++|
T Consensus 170 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li 248 (294)
T 4eqm_A 170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVP-NVTTDVRKDIPQSLSNVI 248 (294)
T ss_dssp -----CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCC-CHHHHSCTTSCHHHHHHH
T ss_pred CccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCC-CcchhcccCCCHHHHHHH
Confidence 2346899999999999988999999999999999999999998765332221111111111 111123445678899999
Q ss_pred HHhccCCCCCCC-CHHHHHHHhCcccccc
Q 018381 156 SRCLQYEPRERP-NAKSLVASLTPLQKEA 183 (357)
Q Consensus 156 ~~cl~~~p~~Rp-s~~~v~~~l~~~~~~~ 183 (357)
.+||..||.+|| ++.++.+.|+.+....
T Consensus 249 ~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 249 LRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp HHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred HHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 999999999998 8999999988765543
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=253.58 Aligned_cols=178 Identities=21% Similarity=0.313 Sum_probs=132.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++. .....+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 101 ~~~~~L~~~l~-~~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 101 CEGSSLYHHLH-ASETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp CCEEEHHHHHT-TC---CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred cCCCcHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 46899999994 35678999999999999999999999999 999999999999999999999999998754321
Q ss_pred -CccccCCCCCCccccc---cCCCCccccccchHHHHHHHHhCCCCCCcchhHh-hhcCccccccccccCCCCChhhHHH
Q 018381 76 -KSYSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
....||+.|+|||++. +..++.++||||||+++|+|++|+.||....... ............. .......+++.
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 257 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD-LSKVRSNCPKR 257 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCC-TTSSCTTSCHH
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcc-hhhccccCCHH
Confidence 2346899999999986 5667889999999999999999999986532111 1100000001111 11234467789
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
+.++|.+||..+|.+|||+.++++.|+.+..
T Consensus 258 l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 258 MKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999987653
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-34 Score=262.91 Aligned_cols=178 Identities=21% Similarity=0.298 Sum_probs=145.5
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
+++|+|.+++.... ...+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+||
T Consensus 157 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DF 235 (382)
T 3tt0_A 157 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADF 235 (382)
T ss_dssp CTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSC
T ss_pred cCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCCCcEEEccc
Confidence 46899999996432 246999999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++..... ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.......+. ..+....
T Consensus 236 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~-----~~~~~~~ 310 (382)
T 3tt0_A 236 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-----KLLKEGH 310 (382)
T ss_dssp SCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----HHHHTTC
T ss_pred CcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCC
Confidence 999865432 23356788999999999899999999999999999999 88887654322221 1111222
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccccC
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 184 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~ 184 (357)
....+..+++.+.++|.+||+.||++|||+.+++++|+.+.....
T Consensus 311 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 355 (382)
T 3tt0_A 311 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355 (382)
T ss_dssp CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 233455677899999999999999999999999999998876543
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=270.88 Aligned_cols=176 Identities=20% Similarity=0.298 Sum_probs=145.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
|++|+|.+++....+..+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 342 (454)
T 1qcf_A 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342 (454)
T ss_dssp CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc
Confidence 57899999996433457999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....+|+.|+|||++.++.++.++|||||||++|||++ |+.||......... ..+....+.+.+..+++.+.++
T Consensus 343 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~~l 417 (454)
T 1qcf_A 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-----RALERGYRMPRPENCPEELYNI 417 (454)
T ss_dssp CSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----HHHHHTCCCCCCTTSCHHHHHH
T ss_pred CCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHHHH
Confidence 23345778999999998899999999999999999999 88888654322211 1111222334456778899999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
|.+||..||++|||+.+|+..|+.+...
T Consensus 418 i~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 418 MMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred HHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999887654
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=263.45 Aligned_cols=175 Identities=22% Similarity=0.263 Sum_probs=134.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++. ..+..+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 128 ~~~~sL~~~l~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 205 (373)
T 2qol_A 128 MENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY 205 (373)
T ss_dssp CTTCBHHHHHH-TTTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred CCCCcHHHHHH-hCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCccce
Confidence 57999999995 34568999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...+|+.|+|||++.+..++.++|||||||++|||++ |+.||......... ..+........+..++..+.
T Consensus 206 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~ 280 (373)
T 2qol_A 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-----KAVDEGYRLPPPMDCPAALY 280 (373)
T ss_dssp --------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHH-----HHHHTTEECCCCTTCBHHHH
T ss_pred eccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCCCCccccHHHH
Confidence 1234678999999999999999999999999999998 98887654322211 11112222334556778999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
++|.+||+.||.+||++.++++.|+.+...
T Consensus 281 ~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999887654
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=260.54 Aligned_cols=175 Identities=14% Similarity=0.220 Sum_probs=139.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~ 175 (327)
T 3lzb_A 98 MPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175 (327)
T ss_dssp CSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC------------
T ss_pred cCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccccc
Confidence 578999999953 4567999999999999999999999999 9999999999999999999999999998654322
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...+|+.|+|||++.+..++.++|||||||++|+|++ |..||.......+ ...+........+..++..+.+
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~ 250 (327)
T 3lzb_A 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-----SSILEKGERLPQPPICTIDVYM 250 (327)
T ss_dssp ----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-----HHHHHTTCCCCCCTTBCHHHHH
T ss_pred ccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH-----HHHHHcCCCCCCCccCCHHHHH
Confidence 2345778999999999999999999999999999999 8888765422211 1222222233345567788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
+|.+||..||.+|||+.++++.|+.+...
T Consensus 251 li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 251 IMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 99999999999999999999999887654
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=256.25 Aligned_cols=180 Identities=18% Similarity=0.319 Sum_probs=142.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 172 (295)
T 3ugc_A 95 LPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK 172 (295)
T ss_dssp CTTCBHHHHHHH-CGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC----------
T ss_pred CCCCCHHHHHHh-cccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCCcceee
Confidence 478999999953 3456999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhh---cC--------ccccccccccCCC
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR---GK--------NFLMLMDSCLEGH 142 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~---~~--------~~~~~~~~~~~~~ 142 (357)
...+|+.|+|||++.+..++.++||||||+++|+|++|..|+......... .. .............
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (295)
T 3ugc_A 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 252 (295)
T ss_dssp ---CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCC
T ss_pred eccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCC
Confidence 234677899999999999999999999999999999999887654222111 00 0111112222334
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+..+++.+.++|.+||..||++|||+.++++.|+.+...
T Consensus 253 ~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 253 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 4667788999999999999999999999999999887654
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=255.50 Aligned_cols=179 Identities=16% Similarity=0.206 Sum_probs=137.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CCceeecCCCCCeeeCCCCCeEEecCCccccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK--------GRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 72 (357)
+++|+|.+++. ...+++.+++.++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+++..
T Consensus 117 ~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 192 (337)
T 3mdy_A 117 HENGSLYDYLK---STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVKF 192 (337)
T ss_dssp CTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred cCCCcHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEeCCCceee
Confidence 46899999994 45799999999999999999999998 8 999999999999999999999999999754
Q ss_pred CCC--------CccccCCCCCCccccccCCCCcc------ccccchHHHHHHHHhC----------CCCCCcch-----h
Q 018381 73 RDG--------KSYSTNLAFTPPEYLRTGRVIPE------SVVYSFGTLLLDLLSG----------KHIPPSHA-----L 123 (357)
Q Consensus 73 ~~~--------~~~~gt~~y~aPE~~~~~~~~~~------~Dv~slG~~l~el~~g----------~~~~~~~~-----~ 123 (357)
... ....||+.|+|||++.+...+.. +|||||||++|||++| ..||.... .
T Consensus 193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~ 272 (337)
T 3mdy_A 193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSY 272 (337)
T ss_dssp C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCch
Confidence 432 23478999999999987666655 9999999999999999 44443210 0
Q ss_pred HhhhcCccccccccccCCC-CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 124 DLIRGKNFLMLMDSCLEGH-FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
.............+.+... .+..+++.+.++|.+||+.||.+|||+.+++++|+.+.+..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 273 EDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred hhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 0000000001111111111 12367889999999999999999999999999999887654
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=258.79 Aligned_cols=170 Identities=17% Similarity=0.187 Sum_probs=137.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC----CeEEecCCcccccCCC-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~~~~~~~~- 75 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 97 ~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~ 173 (361)
T 2yab_A 97 VSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV 173 (361)
T ss_dssp CCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC
Confidence 57999999994 4678999999999999999999999999 99999999999998777 7999999999866543
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||.+........... . ....+........++.+.+
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~-~-~~~~~~~~~~~~~s~~~~~ 251 (361)
T 2yab_A 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT-A-VSYDFDEEFFSQTSELAKD 251 (361)
T ss_dssp CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH-T-TCCCCCHHHHTTSCHHHHH
T ss_pred ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-h-cCCCCCchhccCCCHHHHH
Confidence 34579999999999998899999999999999999999999987653222111100 0 0000111111245678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
||.+||..||.+|||+.++++|
T Consensus 252 li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 252 FIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp HHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHCCCChhHCcCHHHHhcC
Confidence 9999999999999999999987
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=266.58 Aligned_cols=174 Identities=24% Similarity=0.341 Sum_probs=142.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. .+..+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 194 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 194 VQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp CTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 578999999953 4457999999999999999999999999 9999999999999999999999999998644321
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...+++.|+|||++.++.++.++|||||||++|||++ |..||........ ...+......+.+..+++.+.+
T Consensus 272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~ 346 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-----REFVEKGGRLPCPELCPDAVFR 346 (377)
T ss_dssp SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH-----HHHHHTTCCCCCCTTCCHHHHH
T ss_pred CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHHH
Confidence 2234678999999998889999999999999999998 8888765432221 1112222233455667889999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
+|.+||+.||++|||+.++++.|+.+..
T Consensus 347 li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 347 LMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999987754
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=250.83 Aligned_cols=178 Identities=20% Similarity=0.261 Sum_probs=143.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
+++|+|.+++.. ....+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 105 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (298)
T 3pls_A 105 MCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSV 182 (298)
T ss_dssp CTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCS
T ss_pred ccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCccccc
Confidence 468999999953 5678999999999999999999999999 99999999999999999999999999975432
Q ss_pred --CCccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 75 --GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 75 --~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
.....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+...... ...............+..+++.+.
T Consensus 183 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~ 258 (298)
T 3pls_A 183 QQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP----FDLTHFLAQGRRLPQPEYCPDSLY 258 (298)
T ss_dssp CCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG----GGHHHHHHTTCCCCCCTTCCHHHH
T ss_pred ccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH----HHHHHHhhcCCCCCCCccchHHHH
Confidence 22345788999999999989999999999999999999977665543111 111111111222234555678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCccccccC
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQKEAE 184 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~ 184 (357)
+++.+||..||.+|||+.++++.|+.+.....
T Consensus 259 ~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 259 QVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998876643
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=251.14 Aligned_cols=172 Identities=17% Similarity=0.186 Sum_probs=136.6
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++.......+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 102 ~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 180 (308)
T 3g33_A 102 DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV 180 (308)
T ss_dssp CCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSGGGG
T ss_pred hcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeCccccccCCCcccCCcc
Confidence 479999996545556999999999999999999999999 999999999999999999999999999865533 3457
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccc--------------ccccccCC----
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM--------------LMDSCLEG---- 141 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~---- 141 (357)
||+.|+|||++.+..++.++|||||||++|+|++|+.||............... .....+..
T Consensus 181 gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (308)
T 3g33_A 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPR 260 (308)
T ss_dssp CCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCC
T ss_pred ccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCC
Confidence 899999999999999999999999999999999999988654322111100000 00000000
Q ss_pred ---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 142 ---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 142 ---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...+..++.+.++|.+||+.||++|||+.++++|
T Consensus 261 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 261 PVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0112456789999999999999999999999987
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=250.61 Aligned_cols=181 Identities=18% Similarity=0.228 Sum_probs=137.1
Q ss_pred CCCCchhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhc---CCCceeecCCCCCeeeCCCCC-eEEecCCcccccCCC
Q 018381 1 MPNETLSKHLFHWEN-QPMKWAMRVRVALYLAQALDYCSS---KGRALYHDLNTYRILFDQDGN-PRLSCFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~---~~~iiH~dlkp~Nill~~~~~-~kl~Dfg~~~~~~~~ 75 (357)
++||+|.+++..... ..+++..++.++.|+++||.|||+ ++ |+||||||+||+++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 578999999963222 258999999999999999999999 77 999999999999998887 799999998755432
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... ............+..+++.+.++
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~l 236 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI---MWAVHNGTRPPLIKNLPKPIESL 236 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHH---HHHHHTTCCCCCBTTCCHHHHHH
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHH---HHHHhcCCCCCcccccCHHHHHH
Confidence 34568999999999998899999999999999999999999886431111100 00001111222344567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCccccccCC
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQKEAEV 185 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~ 185 (357)
|.+||..||.+|||+.++++.|+.+......
T Consensus 237 i~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 237 MTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999888765433
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=262.60 Aligned_cols=159 Identities=21% Similarity=0.326 Sum_probs=130.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC------CccccCCCCCCccccc
Q 018381 18 MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLR 91 (357)
Q Consensus 18 l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~ 91 (357)
+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|||++.
T Consensus 190 l~~~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 268 (359)
T 3vhe_A 190 LTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 268 (359)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhc
Confidence 999999999999999999999999 999999999999999999999999999865332 2345788999999999
Q ss_pred cCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHH
Q 018381 92 TGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAK 170 (357)
Q Consensus 92 ~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ 170 (357)
+..++.++|||||||++|+|++ |..||........ +............+..+++.+.++|.+||..||.+|||+.
T Consensus 269 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ 344 (359)
T 3vhe_A 269 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 344 (359)
T ss_dssp HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH----HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH----HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 9999999999999999999998 9988765421111 1111111122234556678899999999999999999999
Q ss_pred HHHHHhCcccc
Q 018381 171 SLVASLTPLQK 181 (357)
Q Consensus 171 ~v~~~l~~~~~ 181 (357)
+++++|+.+..
T Consensus 345 ell~~L~~~~~ 355 (359)
T 3vhe_A 345 ELVEHLGNLLQ 355 (359)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988754
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=251.93 Aligned_cols=166 Identities=20% Similarity=0.242 Sum_probs=139.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .+..
T Consensus 88 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~ 164 (318)
T 1fot_A 88 IEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLC 164 (318)
T ss_dssp CCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCC
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCcccccc
Confidence 57899999995 4567999999999999999999999999 999999999999999999999999999865543 3567
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
||+.|+|||++.+..++.++|+|||||++|||++|..||.......... ...... ..++...++++.++|.+||
T Consensus 165 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~----~i~~~~--~~~p~~~~~~~~~li~~lL 238 (318)
T 1fot_A 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYE----KILNAE--LRFPPFFNEDVKDLLSRLI 238 (318)
T ss_dssp SCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----HHHHCC--CCCCTTSCHHHHHHHHHHT
T ss_pred CCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH----HHHhCC--CCCCCCCCHHHHHHHHHHh
Confidence 9999999999999899999999999999999999999987543221111 111111 1245566788999999999
Q ss_pred cCCCCCCC-----CHHHHHHH
Q 018381 160 QYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 160 ~~~p~~Rp-----s~~~v~~~ 175 (357)
..||.+|| ++.++++|
T Consensus 239 ~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 239 TRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp CSCTTTCTTSSTTTTHHHHTS
T ss_pred ccCHHHcCCCcCCCHHHHhcC
Confidence 99999999 89999886
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=256.47 Aligned_cols=180 Identities=16% Similarity=0.177 Sum_probs=141.1
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC-----eEEecCCcccccCCC--
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN-----PRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~-----~kl~Dfg~~~~~~~~-- 75 (357)
+|+|.+++.. .++.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 88 ~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~ 165 (330)
T 2izr_A 88 GPSLEDLFDL-CDRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET 165 (330)
T ss_dssp CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT
T ss_pred CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC
Confidence 7999999953 3678999999999999999999999999 999999999999998887 999999999854332
Q ss_pred ---------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccC---CCC
Q 018381 76 ---------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE---GHF 143 (357)
Q Consensus 76 ---------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 143 (357)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+......... ...
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 244 (330)
T 2izr_A 166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKE-RYQKIGDTKRATPIEVL 244 (330)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHH-HHHHHHHHHHHSCHHHH
T ss_pred CccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHH-HHHHHHhhhccCCHHHH
Confidence 34578999999999999899999999999999999999999987531110000 00000000000 001
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccccCCC
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 186 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~~ 186 (357)
....+ ++.+++..||..||.+||++.+|++.|+.+.......
T Consensus 245 ~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~ 286 (330)
T 2izr_A 245 CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYM 286 (330)
T ss_dssp TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 12244 8999999999999999999999999998876654443
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=259.90 Aligned_cols=177 Identities=18% Similarity=0.222 Sum_probs=134.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++. .....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 173 ~~~g~L~~~l~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~ 250 (373)
T 3c1x_A 173 MKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 250 (373)
T ss_dssp CTTCBHHHHHH-CTTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred CCCCCHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeeccccccccccccccc
Confidence 57899999994 35567999999999999999999999999 999999999999999999999999999754322
Q ss_pred ---CccccCCCCCCccccccCCCCccccccchHHHHHHHHhC-CCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 76 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG-KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
....+|+.|+|||++.+..++.++|||||||++|||++| ..||..... ......+........+..++..+
T Consensus 251 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~-----~~~~~~~~~~~~~~~p~~~~~~l 325 (373)
T 3c1x_A 251 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQGRRLLQPEYCPDPL 325 (373)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS-----SCHHHHHHTTCCCCCCTTCCHHH
T ss_pred cccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCCHHH
Confidence 123467789999999999999999999999999999995 444433211 11111111111223345677889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhCccccccC
Q 018381 152 VRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 184 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~ 184 (357)
.++|.+||..||++|||+.++++.|+.+.....
T Consensus 326 ~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 326 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999998876543
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=252.28 Aligned_cols=170 Identities=21% Similarity=0.256 Sum_probs=138.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
++||+|.+++ ....+++.++..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 124 ~~~~~L~~~l---~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 199 (321)
T 2c30_A 124 LQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 199 (321)
T ss_dssp CCSCBHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred CCCCCHHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccc
Confidence 5799999999 4567999999999999999999999999 999999999999999999999999998755432 3
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... .+.....+.. ......++.+.++|.
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~l~~li~ 276 (321)
T 2c30_A 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-RLRDSPPPKL--KNSHKVSPVLRDFLE 276 (321)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSSCCCC--TTGGGSCHHHHHHHH
T ss_pred cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHhcCCCCCc--CccccCCHHHHHHHH
Confidence 4578999999999998889999999999999999999999986542221110 0111111111 123346778999999
Q ss_pred HhccCCCCCCCCHHHHHHHhC
Q 018381 157 RCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+||..||++|||+.+++++..
T Consensus 277 ~~l~~dp~~Rps~~ell~hp~ 297 (321)
T 2c30_A 277 RMLVRDPQERATAQELLDHPF 297 (321)
T ss_dssp HHSCSSTTTSCCHHHHHTSGG
T ss_pred HHccCChhhCcCHHHHhcChh
Confidence 999999999999999999743
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=251.22 Aligned_cols=177 Identities=19% Similarity=0.231 Sum_probs=140.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++. .....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.....
T Consensus 109 ~~~~~L~~~l~-~~~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 186 (298)
T 3f66_A 109 MKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 186 (298)
T ss_dssp CTTCBHHHHHH-CTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC
T ss_pred CCCCCHHHHHH-hcccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccchhcc
Confidence 47899999995 35677999999999999999999999999 999999999999999999999999999755432
Q ss_pred ---CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 76 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+..... ................+..++..+.
T Consensus 187 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~ 262 (298)
T 3f66_A 187 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----TFDITVYLLQGRRLLQPEYCPDPLY 262 (298)
T ss_dssp -----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC----TTTHHHHHHTTCCCCCCTTCCHHHH
T ss_pred ccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC----HHHHHHHHhcCCCCCCCccCCHHHH
Confidence 233567889999999988999999999999999999996655443211 0111111111112223455678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
+++.+||..||++|||+.++++.|+.+....
T Consensus 263 ~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 263 EVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999998887654
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=270.15 Aligned_cols=175 Identities=19% Similarity=0.293 Sum_probs=145.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
|++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 376 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 376 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECC
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceeec
Confidence 57899999997555677999999999999999999999999 9999999999999999999999999998654322
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...+|+.|+|||++.++.++.++|||||||++|||++ |..||...... .+...+....+...+..+++.+.+|
T Consensus 377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l 451 (495)
T 1opk_A 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKDYRMERPEGCPEKVYEL 451 (495)
T ss_dssp TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 2345678999999998889999999999999999999 88777653221 1122223333444566788899999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
|.+||+.||++|||+.+|++.|+.+..
T Consensus 452 i~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 452 MRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred HHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 999999999999999999999987653
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=260.50 Aligned_cols=166 Identities=19% Similarity=0.273 Sum_probs=136.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.... ..
T Consensus 106 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~ 182 (353)
T 3txo_A 106 VNGGDLMFHIQ--KSRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTA 182 (353)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC------
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecccCCcccc
Confidence 57899999995 4567999999999999999999999999 99999999999999999999999999985432 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+..||+.|+|||++.+..++.++|+|||||++|||++|+.||.......+... .... ...++...++.+.++|.
T Consensus 183 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~li~ 256 (353)
T 3txo_A 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA----ILND--EVVYPTWLHEDATGILK 256 (353)
T ss_dssp ---CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTSCHHHHHHHH
T ss_pred ccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHH----HHcC--CCCCCCCCCHHHHHHHH
Confidence 56799999999999988899999999999999999999999876533322111 1111 11245556788999999
Q ss_pred HhccCCCCCCCCH------HHHHHH
Q 018381 157 RCLQYEPRERPNA------KSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~------~~v~~~ 175 (357)
+||+.||.+||++ .++++|
T Consensus 257 ~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 257 SFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp HHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred HHhhhCHHHccCCcccCCHHHHhhC
Confidence 9999999999998 788876
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=269.05 Aligned_cols=177 Identities=23% Similarity=0.278 Sum_probs=142.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
|++|+|.+++....+..+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 338 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence 57899999995433467999999999999999999999999 9999999999999999999999999998654321
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...+|+.|+|||++.++.++.++|||||||++|||++ |+.||......... ..+....+.+.+..+++.+.++
T Consensus 339 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~~l 413 (452)
T 1fmk_A 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-----DQVERGYRMPCPPECPESLHDL 413 (452)
T ss_dssp ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-----HHHHTTCCCCCCTTSCHHHHHH
T ss_pred cCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHHHH
Confidence 2345788999999998999999999999999999999 88887654322111 1111222334556778899999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
|.+||..||++|||+.++++.|+.+....
T Consensus 414 i~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 414 MCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 99999999999999999999998876553
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-34 Score=249.66 Aligned_cols=175 Identities=18% Similarity=0.263 Sum_probs=141.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. .+..+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 85 ISNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp CTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred cCCCcHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 478999999953 3457999999999999999999999999 9999999999999999999999999998655432
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..||........... .........+...++.+.++
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~l 237 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK-----VSQGHRLYRPHLASDTIYQI 237 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-----HHTTCCCCCCTTSCHHHHHH
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHH-----HHcCCCCCCCCcChHHHHHH
Confidence 2345677999999998889999999999999999999 8888765432221111 11111122344456789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
+.+||+.||.+|||+.+++++|+.+.+.
T Consensus 238 i~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 238 MYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 9999999999999999999999988764
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=260.23 Aligned_cols=170 Identities=16% Similarity=0.293 Sum_probs=137.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC----CCC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++... ...
T Consensus 135 ~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~ 211 (396)
T 4dc2_A 135 VNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 211 (396)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeecccCCCccc
Confidence 57999999995 3568999999999999999999999999 9999999999999999999999999998532 223
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc-----cccccccccCCCCChhhHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----FLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 151 (357)
+..||+.|+|||++.+..++.++|+|||||++|||++|+.||............ ...... ....++...++++
T Consensus 212 ~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~s~~~ 289 (396)
T 4dc2_A 212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKA 289 (396)
T ss_dssp CCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTTSCHHH
T ss_pred cccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCcCCHHH
Confidence 567999999999999999999999999999999999999998532111100000 001111 1123456677899
Q ss_pred HHHHHHhccCCCCCCCCH------HHHHHH
Q 018381 152 VRLASRCLQYEPRERPNA------KSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~------~~v~~~ 175 (357)
.+||.+||+.||.+||++ .++++|
T Consensus 290 ~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 290 ASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp HHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred HHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 999999999999999985 688876
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-34 Score=259.67 Aligned_cols=176 Identities=18% Similarity=0.166 Sum_probs=137.7
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC--CeEEecCCcccccCCC-----
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG--NPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~----- 75 (357)
+|+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 135 ~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~ 211 (345)
T 2v62_A 135 GIDLQKISG--QNGTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQ 211 (345)
T ss_dssp EEEHHHHCB--GGGBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCC
T ss_pred CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcEEEEeCCCceeccccccccc
Confidence 689999995 3348999999999999999999999999 99999999999998877 9999999999754321
Q ss_pred ------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc----cccccccccCCC-CC
Q 018381 76 ------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN----FLMLMDSCLEGH-FS 144 (357)
Q Consensus 76 ------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~ 144 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||.....+...... ............ ..
T Consensus 212 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (345)
T 2v62_A 212 YQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPS 291 (345)
T ss_dssp CCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCT
T ss_pred chhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccc
Confidence 2346899999999999888999999999999999999999998542111110000 000000000000 01
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 145 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 145 ~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
..+++.+.++|.+||..||++|||+.+|++.|+.+..
T Consensus 292 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 292 GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1456789999999999999999999999999988654
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-33 Score=261.16 Aligned_cols=170 Identities=15% Similarity=0.143 Sum_probs=138.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC---CCCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---QDGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~-- 75 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 92 ~~gg~L~~~i~--~~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~ 168 (444)
T 3soa_A 92 VTGGELFEDIV--AREYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168 (444)
T ss_dssp CBCCBHHHHHH--HCSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence 56899999996 4567999999999999999999999999 99999999999998 4678999999999865543
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...+..+....+++.+.+
T Consensus 169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~ 246 (444)
T 3soa_A 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAG--AYDFPSPEWDTVTPEAKD 246 (444)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT--CCCCCTTTTTTSCHHHHH
T ss_pred eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhC--CCCCCccccccCCHHHHH
Confidence 2457899999999999889999999999999999999999998765332221111000 011111122356788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
||.+||+.||.+|||+.++++|
T Consensus 247 li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 247 LINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp HHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHcCCChhHCCCHHHHhcC
Confidence 9999999999999999999998
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=255.84 Aligned_cols=177 Identities=20% Similarity=0.312 Sum_probs=139.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC--------eEEecCCccccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN--------PRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~--------~kl~Dfg~~~~~ 72 (357)
++||+|.+++.. ....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++...
T Consensus 94 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~ 171 (289)
T 4fvq_A 94 VKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171 (289)
T ss_dssp CTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTT
T ss_pred CCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccCcccccc
Confidence 468999999953 4455999999999999999999999999 999999999999998887 999999999877
Q ss_pred CCCCccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 73 RDGKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 73 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|..|+........... ... .....+...++.+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~l 245 (289)
T 4fvq_A 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ----FYE--DRHQLPAPKAAEL 245 (289)
T ss_dssp SCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH----HHH--TTCCCCCCSSCTT
T ss_pred cCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHH----Hhh--ccCCCCCCCCHHH
Confidence 66666778999999999987 6689999999999999999997666554321111100 000 0112233445679
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhCccccccCC
Q 018381 152 VRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 185 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~ 185 (357)
.++|.+||+.||++|||+.+++++|+.+......
T Consensus 246 ~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 246 ANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999999998765433
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=249.16 Aligned_cols=174 Identities=18% Similarity=0.272 Sum_probs=142.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++. .....+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~~~L~~~l~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 87 MEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp CTTCBHHHHHH-TTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCCcHHHHHH-hcCcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 57899999994 35567999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....+|+.|+|||++.+..++.++||||||+++|+|++ |..||........... +........+...++.+.++
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l 239 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-----ISTGFRLYKPRLASTHVYQI 239 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-----HHTTCCCCCCTTSCHHHHHH
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHH-----HhcCccCCCCCcCCHHHHHH
Confidence 23456778999999998899999999999999999999 8888765432221111 11112223344567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
+.+||..||.+|||+.+++++|+.+.+
T Consensus 240 i~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 240 MNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 999999999999999999999988754
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=252.52 Aligned_cols=174 Identities=21% Similarity=0.278 Sum_probs=133.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. .+..+++.+++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 97 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (281)
T 1mp8_A 97 CTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 174 (281)
T ss_dssp CTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC---------------
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCccccccc
Confidence 468899999953 4567999999999999999999999999 9999999999999999999999999998654332
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...+|+.|+|||++.+..++.++|||||||++|+|++ |..||......... ..+........+..+++.+.++
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~~l 249 (281)
T 1mp8_A 175 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-----GRIENGERLPMPPNCPPTLYSL 249 (281)
T ss_dssp ----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-----HHHHTTCCCCCCTTCCHHHHHH
T ss_pred ccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHH-----HHHHcCCCCCCCCCCCHHHHHH
Confidence 2345778999999998899999999999999999997 88787653221111 1111111223455678899999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
|.+||..||++|||+.++++.|+.+..
T Consensus 250 i~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 250 MTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 999999999999999999999987654
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=256.68 Aligned_cols=166 Identities=20% Similarity=0.297 Sum_probs=138.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++.... ..
T Consensus 103 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 179 (353)
T 2i0e_A 103 VNGGDLMYHIQ--QVGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK 179 (353)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccc
Confidence 57999999995 3467999999999999999999999999 99999999999999999999999999985322 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|+|||||++|||++|+.||.......+.. .+... ...++...++++.++|.
T Consensus 180 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~----~i~~~--~~~~p~~~s~~~~~li~ 253 (353)
T 2i0e_A 180 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ----SIMEH--NVAYPKSMSKEAVAICK 253 (353)
T ss_dssp CCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHC--CCCCCTTSCHHHHHHHH
T ss_pred cccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHH----HHHhC--CCCCCCCCCHHHHHHHH
Confidence 5679999999999999999999999999999999999999987653322211 11111 12345567789999999
Q ss_pred HhccCCCCCCCC-----HHHHHHH
Q 018381 157 RCLQYEPRERPN-----AKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps-----~~~v~~~ 175 (357)
+||..||.+||+ +.++++|
T Consensus 254 ~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 254 GLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp HHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcC
Confidence 999999999995 5888876
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=264.32 Aligned_cols=170 Identities=11% Similarity=0.033 Sum_probs=133.9
Q ss_pred CchhhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC-
Q 018381 4 ETLSKHLFHWENQPMKWAMR------VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 76 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~------~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 76 (357)
|+|.+++.. .+..+++..+ +.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 172 ~~L~~~l~~-~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~ 249 (371)
T 3q60_A 172 VDLELLFST-LDFVYVFRGDEGILALHILTAQLIRLAANLQSKG-LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP 249 (371)
T ss_dssp EEHHHHHHH-HHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE
T ss_pred CCHHHHHHH-hccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-CccCcCCHHHEEECCCCCEEEEecceeeecCCCcc
Confidence 899999953 2345566666 788899999999999999 9999999999999999999999999998776554
Q ss_pred ccccCCCCCCcccccc--CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc---cccccccccCCCCChhhHHHH
Q 018381 77 SYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN---FLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 151 (357)
...+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||............ ................+++.+
T Consensus 250 ~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (371)
T 3q60_A 250 ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFV 329 (371)
T ss_dssp GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHH
T ss_pred CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHH
Confidence 5667899999999987 67899999999999999999999998764222111110 011111122222234667899
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 018381 152 VRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+||.+||+.||++|||+.++++|
T Consensus 330 ~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 330 KTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp HHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred HHHHHHHcCCChhhCCCHHHHhcC
Confidence 999999999999999999999875
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=253.82 Aligned_cols=170 Identities=16% Similarity=0.168 Sum_probs=137.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC----CeEEecCCcccccCCC-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~~~~~~~~- 75 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 96 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~ 172 (326)
T 2y0a_A 96 VAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172 (326)
T ss_dssp CCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS
T ss_pred CCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC
Confidence 47899999994 4578999999999999999999999999 99999999999999887 7999999999865432
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||............ .. ....+.......++..+.+
T Consensus 173 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~ 250 (326)
T 2y0a_A 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-SA-VNYEFEDEYFSNTSALAKD 250 (326)
T ss_dssp CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH-HH-TCCCCCHHHHTTSCHHHHH
T ss_pred ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH-Hh-cCCCcCccccccCCHHHHH
Confidence 3457899999999999889999999999999999999999998754322111100 00 0001111111245678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+|.+||+.||++|||+.++++|
T Consensus 251 li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 251 FIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHccCChhhCCCHHHHhcC
Confidence 9999999999999999999997
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=258.08 Aligned_cols=178 Identities=20% Similarity=0.290 Sum_probs=141.2
Q ss_pred CCCCchhhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC
Q 018381 1 MPNETLSKHLFHWEN---------------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG 59 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~ 59 (357)
+++|+|.+++..... ..+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++
T Consensus 131 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~ 209 (344)
T 1rjb_A 131 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVLVTHGK 209 (344)
T ss_dssp CTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEEETTT
T ss_pred CCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEEcCCC
Confidence 478999999964322 34899999999999999999999999 99999999999999999
Q ss_pred CeEEecCCcccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccc
Q 018381 60 NPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFL 132 (357)
Q Consensus 60 ~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~ 132 (357)
.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|+|++ |..||....... .+.
T Consensus 210 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----~~~ 285 (344)
T 1rjb_A 210 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA----NFY 285 (344)
T ss_dssp EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----HHH
T ss_pred cEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH----HHH
Confidence 99999999997554322 2346788999999998899999999999999999998 888876532111 111
Q ss_pred cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 133 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
..+........+..+++.+.++|.+||..||.+|||+.+++++|+.+....
T Consensus 286 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 286 KLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred HHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 111222233345567789999999999999999999999999998876553
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=248.98 Aligned_cols=167 Identities=17% Similarity=0.208 Sum_probs=134.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++ ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 120 ~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 195 (298)
T 2zv2_A 120 VNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLS 195 (298)
T ss_dssp CTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEEC
T ss_pred CCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCCEEEecCCCcccccccccccc
Confidence 4688998877 4568999999999999999999999999 999999999999999999999999999865543 2
Q ss_pred ccccCCCCCCccccccCC---CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGR---VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...||+.|+|||++.+.. ++.++|||||||++|+|++|+.||........... ........+.....++.+.+
T Consensus 196 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~ 271 (298)
T 2zv2_A 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSK----IKSQALEFPDQPDIAEDLKD 271 (298)
T ss_dssp CCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHCCCCCCSSSCCCHHHHH
T ss_pred CCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHH----HhcccCCCCCccccCHHHHH
Confidence 457899999999998755 36789999999999999999999876432221111 00111111122346678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+|.+||..||++|||+.++++|
T Consensus 272 li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 272 LITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HHHHHTCSCTTTSCCHHHHTTC
T ss_pred HHHHHhhcChhhCCCHHHHhcC
Confidence 9999999999999999999876
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=247.87 Aligned_cols=172 Identities=21% Similarity=0.287 Sum_probs=134.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CceeecCCCCCeeeCC--------CCCeEEecCCccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG--RALYHDLNTYRILFDQ--------DGNPRLSCFGLMK 70 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~iiH~dlkp~Nill~~--------~~~~kl~Dfg~~~ 70 (357)
++||+|.+++ .++.+++.+++.++.|++.||.|||+++ +++||||||+||+++. ++.+||+|||+++
T Consensus 88 ~~~~~L~~~~---~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 88 ARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp CTTEEHHHHH---TSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred CCCCCHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 4689999999 4678999999999999999999999987 3789999999999986 6789999999998
Q ss_pred ccCCC--CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhH
Q 018381 71 NSRDG--KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 148 (357)
Q Consensus 71 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (357)
..... ....||+.|+|||++.+..++.++||||||+++|+|++|+.||.......... ...........+..++
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 240 (271)
T 3dtc_A 165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY----GVAMNKLALPIPSTCP 240 (271)
T ss_dssp -----------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH----HHHTSCCCCCCCTTCC
T ss_pred ccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----hhhcCCCCCCCCcccC
Confidence 55433 24578999999999998889999999999999999999999987543222111 1111122223455677
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 149 TELVRLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 149 ~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
+.+.++|.+||..||.+|||+.+++++|+.+
T Consensus 241 ~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 241 EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 8899999999999999999999999998753
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-34 Score=256.00 Aligned_cols=179 Identities=18% Similarity=0.233 Sum_probs=136.7
Q ss_pred CCCCchhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC
Q 018381 1 MPNETLSKHLFHW----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 76 (357)
+++|+|.+++... ....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~ 191 (323)
T 3qup_A 113 MKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191 (323)
T ss_dssp CTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred ccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEeeccccccccccc
Confidence 4689999998531 2236999999999999999999999999 9999999999999999999999999997654322
Q ss_pred ------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHH
Q 018381 77 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 149 (357)
Q Consensus 77 ------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
...+|+.|+|||++.+..++.++|||||||++|+|++ |..||......... ...........+..+++
T Consensus 192 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 266 (323)
T 3qup_A 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY-----NYLIGGNRLKQPPECME 266 (323)
T ss_dssp ---------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-----HHHHTTCCCCCCTTCCH
T ss_pred cccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHH-----HHHhcCCCCCCCCccCH
Confidence 2346778999999999899999999999999999999 88777653221111 11111112234556778
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhCccccccCC
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 185 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~ 185 (357)
.+.++|.+||..||.+|||+.++++.|+.+......
T Consensus 267 ~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 267 EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 899999999999999999999999999988766433
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=254.80 Aligned_cols=170 Identities=17% Similarity=0.186 Sum_probs=137.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC--CCCeEEecCCcccccCCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ--DGNPRLSCFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~-- 76 (357)
++||+|.+++. .....+++.+++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 83 ~~g~~L~~~l~-~~~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~ 160 (321)
T 1tki_A 83 ISGLDIFERIN-TSAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHT-SSSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence 57899999994 24467999999999999999999999999 999999999999987 7899999999998765543
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccC--CCCChhhHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE--GHFSNDDGTELVR 153 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 153 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..||........... ....... ......++.++.+
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~s~~~~~ 236 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN----IMNAEYTFDEEAFKEISIEAMD 236 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHHTCCCCCHHHHTTSCHHHHH
T ss_pred ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHH----HHcCCCCCChhhhccCCHHHHH
Confidence 34689999999999988889999999999999999999999876533221111 1111110 0011245678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 018381 154 LASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l 176 (357)
+|.+||..||.+|||+.++++|-
T Consensus 237 li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 237 FVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHcCCChhHCcCHHHHhcCh
Confidence 99999999999999999999974
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=246.90 Aligned_cols=176 Identities=22% Similarity=0.406 Sum_probs=140.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-ceeecCCCCCeeeCCCCC-----eEEecCCcccccCC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGR-ALYHDLNTYRILFDQDGN-----PRLSCFGLMKNSRD 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-iiH~dlkp~Nill~~~~~-----~kl~Dfg~~~~~~~ 74 (357)
+++|+|.+++.. ....+++..++.++.|++.||.|||+.++ |+||||||+||+++.++. +||+|||+++....
T Consensus 103 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~ 181 (287)
T 4f0f_A 103 VPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH 181 (287)
T ss_dssp CTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS
T ss_pred cCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc
Confidence 468999999853 56689999999999999999999999864 999999999999988776 99999999986554
Q ss_pred C-CccccCCCCCCccccc--cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 75 G-KSYSTNLAFTPPEYLR--TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 75 ~-~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
. ....||+.|+|||++. ...++.++|||||||++|+|++|+.||.......... .............+..+++.+
T Consensus 182 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l 259 (287)
T 4f0f_A 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREEGLRPTIPEDCPPRL 259 (287)
T ss_dssp CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHSCCCCCCCTTSCHHH
T ss_pred cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhccCCCCCCCcccCHHH
Confidence 3 3467899999999984 4556889999999999999999999986532111100 011112223334556678899
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 152 VRLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
.++|.+||+.||.+|||+.++++.|+.+
T Consensus 260 ~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 260 RNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 9999999999999999999999998753
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-34 Score=261.57 Aligned_cols=176 Identities=20% Similarity=0.305 Sum_probs=141.9
Q ss_pred CCCCchhhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC---CeEEecCCccccc
Q 018381 1 MPNETLSKHLFHW-----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~-----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~~~~~ 72 (357)
++||+|.+++... ....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~ 234 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCcccccc
Confidence 5789999999632 2256999999999999999999999999 99999999999999555 5999999998743
Q ss_pred ------CCCCccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCCh
Q 018381 73 ------RDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 145 (357)
Q Consensus 73 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
.......||+.|+|||++.+..++.++|||||||++|||++ |..||......... ..+........+.
T Consensus 235 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~-----~~i~~~~~~~~~~ 309 (367)
T 3l9p_A 235 YRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL-----EFVTSGGRMDPPK 309 (367)
T ss_dssp HHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----HHHHTTCCCCCCT
T ss_pred ccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCCCCc
Confidence 22334567899999999998999999999999999999998 88887654322211 1111111223455
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.++..+.+||.+||+.||.+|||+.+|+++|+.+...
T Consensus 310 ~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 310 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 6778899999999999999999999999999887665
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-33 Score=255.16 Aligned_cols=181 Identities=18% Similarity=0.196 Sum_probs=138.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC---------CCceeecCCCCCeeeCCCCCeEEecCCcccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK---------GRALYHDLNTYRILFDQDGNPRLSCFGLMKN 71 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---------~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~ 71 (357)
+++|+|.+++. ...+++..++.++.||+.||.|||+. + |+||||||+|||++.++.+||+|||+++.
T Consensus 94 ~~~g~L~~~l~---~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kL~DFG~a~~ 169 (336)
T 3g2f_A 94 YPNGSLXKYLS---LHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVISDFGLSMR 169 (336)
T ss_dssp CTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CCCCcHHHHHh---hcccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCcEEEeeccceee
Confidence 47899999993 45569999999999999999999999 8 99999999999999999999999999975
Q ss_pred cCCC------------CccccCCCCCCcccccc-------CCCCccccccchHHHHHHHHhCCCCCCcchhH-h------
Q 018381 72 SRDG------------KSYSTNLAFTPPEYLRT-------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALD-L------ 125 (357)
Q Consensus 72 ~~~~------------~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~------ 125 (357)
.... ....||+.|+|||++.+ ..++.++|||||||++|||++|..|+...... .
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~ 249 (336)
T 3g2f_A 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQ 249 (336)
T ss_dssp CSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTH
T ss_pred cccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhh
Confidence 4321 13468999999999986 34567899999999999999998765432100 0
Q ss_pred --hhcCc---------cccccccccCCC--CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccccCC
Q 018381 126 --IRGKN---------FLMLMDSCLEGH--FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 185 (357)
Q Consensus 126 --~~~~~---------~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~ 185 (357)
..... ......+.+... ....+++.+.+||.+||..||++|||+.++++.|+.+......
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 250 TEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp HHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred cccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence 00000 000001111111 1224677899999999999999999999999999988766443
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-33 Score=257.65 Aligned_cols=177 Identities=22% Similarity=0.267 Sum_probs=141.9
Q ss_pred CCCCchhhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC
Q 018381 1 MPNETLSKHLFHWE----------------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 58 (357)
Q Consensus 1 ~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~ 58 (357)
+++|+|.+++.... ...+++.+++.++.||+.||.|||+.+ |+||||||+|||++.+
T Consensus 132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~ 210 (343)
T 1luf_A 132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGEN 210 (343)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGG
T ss_pred CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEECCC
Confidence 47899999996422 267999999999999999999999999 9999999999999999
Q ss_pred CCeEEecCCcccccCC------CCccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcc
Q 018381 59 GNPRLSCFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNF 131 (357)
Q Consensus 59 ~~~kl~Dfg~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~ 131 (357)
+.+||+|||+++.... .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||...........
T Consensus 211 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~-- 288 (343)
T 1luf_A 211 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY-- 288 (343)
T ss_dssp GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH--
T ss_pred CeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHH--
Confidence 9999999999875432 223467889999999998899999999999999999999 8888765432222111
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 132 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
+........+..+++.+.++|.+||..||++|||+.+++++|+.+....
T Consensus 289 ---~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 289 ---VRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp ---HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred ---HhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 1111112345567789999999999999999999999999999876553
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-33 Score=252.07 Aligned_cols=180 Identities=13% Similarity=0.132 Sum_probs=141.9
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC---CCCCeEEecCCcccccCCC----
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---QDGNPRLSCFGLMKNSRDG---- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~---- 75 (357)
+|+|.+++.. ....+++.+++.++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 88 ~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (296)
T 3uzp_A 88 GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccc
Confidence 7899999942 4568999999999999999999999999 99999999999994 7889999999998755432
Q ss_pred -------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCC---CCCh
Q 018381 76 -------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG---HFSN 145 (357)
Q Consensus 76 -------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 145 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ....+.......... ....
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 244 (296)
T 3uzp_A 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT-KRQKYERISEKKMSTPIEVLCK 244 (296)
T ss_dssp BCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS-SSSHHHHHHHHHHHSCHHHHTT
T ss_pred ccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchh-hhhhhhhhcccccCCchHHHHh
Confidence 34468999999999999899999999999999999999999986521100 000000111111110 1123
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccccCC
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 185 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~ 185 (357)
.+++.+.++|.+||+.||++|||+.++++.|+.+......
T Consensus 245 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 245 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 4567899999999999999999999999999988766443
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=2.9e-33 Score=255.36 Aligned_cols=167 Identities=16% Similarity=0.184 Sum_probs=140.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++..... .+..
T Consensus 123 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~ 199 (350)
T 1rdq_E 123 VAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC 199 (350)
T ss_dssp CTTCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCE
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccCCccccc
Confidence 57899999995 3467999999999999999999999999 999999999999999999999999999866543 3567
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
||+.|+|||++.+..++.++|+|||||++|+|++|..||.......... .+... ...++...++.+.++|.+||
T Consensus 200 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~----~i~~~--~~~~p~~~~~~~~~li~~lL 273 (350)
T 1rdq_E 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE----KIVSG--KVRFPSHFSSDLKDLLRNLL 273 (350)
T ss_dssp ECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHC--CCCCCTTCCHHHHHHHHHHS
T ss_pred CCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHH----HHHcC--CCCCCCCCCHHHHHHHHHHh
Confidence 9999999999999899999999999999999999999987643222111 11111 11345567788999999999
Q ss_pred cCCCCCCCC-----HHHHHHHh
Q 018381 160 QYEPRERPN-----AKSLVASL 176 (357)
Q Consensus 160 ~~~p~~Rps-----~~~v~~~l 176 (357)
+.||.+||+ +.++++|-
T Consensus 274 ~~dp~~R~~~~~~~~~ei~~h~ 295 (350)
T 1rdq_E 274 QVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp CSCTTTCTTSSTTTTHHHHTSG
T ss_pred hcCHHhccCCccCCHHHHHhCc
Confidence 999999998 89998863
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.5e-34 Score=258.64 Aligned_cols=181 Identities=20% Similarity=0.284 Sum_probs=144.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ....+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 108 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 185 (327)
T 3lxl_A 108 LPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 185 (327)
T ss_dssp CTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEE
T ss_pred cCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccCCccce
Confidence 468999999953 3457999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC----------ccccccccccCCCC
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK----------NFLMLMDSCLEGHF 143 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 143 (357)
...+|+.|+|||++.+..++.++|||||||++|+|++|+.||........... ..............
T Consensus 186 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (327)
T 3lxl_A 186 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPA 265 (327)
T ss_dssp CSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCC
T ss_pred eeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCC
Confidence 23567889999999988889999999999999999999988765433221111 11111222233345
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
+..+++.+.++|.+||..||.+|||+.+++++|+.+....
T Consensus 266 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 266 PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 6677889999999999999999999999999998876553
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-33 Score=256.67 Aligned_cols=183 Identities=15% Similarity=0.124 Sum_probs=143.4
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC--CeEEecCCcccccCCC-----
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG--NPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~----- 75 (357)
+|+|.+++....+..+++.+++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 141 ~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 219 (352)
T 2jii_A 141 GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVA 219 (352)
T ss_dssp CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCC
T ss_pred CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCcccc
Confidence 789999996443578999999999999999999999999 99999999999999988 8999999999754321
Q ss_pred ------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcch--hHhhhcC-c-cccccccccC-CCCC
Q 018381 76 ------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHA--LDLIRGK-N-FLMLMDSCLE-GHFS 144 (357)
Q Consensus 76 ------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~--~~~~~~~-~-~~~~~~~~~~-~~~~ 144 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||.... ...+... . +......... ....
T Consensus 220 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (352)
T 2jii_A 220 YVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHW 299 (352)
T ss_dssp CCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCE
T ss_pred ccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhcccc
Confidence 23478999999999998899999999999999999999999886542 1111000 0 0000000000 0011
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccccCCC
Q 018381 145 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 186 (357)
Q Consensus 145 ~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~~ 186 (357)
...++.+.++|.+||..||++|||+.++++.|+.+.......
T Consensus 300 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 341 (352)
T 2jii_A 300 IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS 341 (352)
T ss_dssp ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence 234688999999999999999999999999999887765443
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-33 Score=253.90 Aligned_cols=162 Identities=20% Similarity=0.249 Sum_probs=131.8
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++.. .+..+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 140 ~~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 217 (311)
T 3p1a_A 140 GPSLQQHCEA-WGASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE 217 (311)
T ss_dssp CCBHHHHHHH-HCSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC------CCC
T ss_pred CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccC
Confidence 6889998853 4567999999999999999999999999 999999999999999999999999998765433 3456
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcch-hHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHA-LDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
||+.|+|||++.+ .++.++|||||||++|||++|..++.... ...+... .....++..+++.+.++|.+|
T Consensus 218 gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~li~~~ 288 (311)
T 3p1a_A 218 GDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQG--------YLPPEFTAGLSSELRSVLVMM 288 (311)
T ss_dssp CCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTT--------CCCHHHHTTSCHHHHHHHHHH
T ss_pred CCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhcc--------CCCcccccCCCHHHHHHHHHH
Confidence 8999999999875 78999999999999999999987665432 1111111 111112234567899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 018381 159 LQYEPRERPNAKSLVAS 175 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~ 175 (357)
|+.||++|||+.+++++
T Consensus 289 L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 289 LEPDPKLRATAEALLAL 305 (311)
T ss_dssp SCSSTTTSCCHHHHHTS
T ss_pred cCCChhhCcCHHHHHhC
Confidence 99999999999999986
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-33 Score=257.01 Aligned_cols=166 Identities=20% Similarity=0.282 Sum_probs=137.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.... ..
T Consensus 100 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 176 (345)
T 1xjd_A 100 LNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 176 (345)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCccc
Confidence 57999999995 3467999999999999999999999999 99999999999999999999999999985432 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+..||+.|+|||++.+..++.++|+|||||++|||++|..||.......+... .... ...++...++.+.++|.
T Consensus 177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~li~ 250 (345)
T 1xjd_A 177 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS----IRMD--NPFYPRWLEKEAKDLLV 250 (345)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTSCHHHHHHHH
T ss_pred CCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHH----HHhC--CCCCCcccCHHHHHHHH
Confidence 56799999999999998999999999999999999999999876432221111 0000 12245556788999999
Q ss_pred HhccCCCCCCCCHH-HHHHH
Q 018381 157 RCLQYEPRERPNAK-SLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~-~v~~~ 175 (357)
+||..||.+||++. ++++|
T Consensus 251 ~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 251 KLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp HHSCSSGGGSBTTBSCGGGS
T ss_pred HHhcCCHhHcCCChHHHHcC
Confidence 99999999999997 77665
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-33 Score=253.12 Aligned_cols=175 Identities=19% Similarity=0.283 Sum_probs=142.1
Q ss_pred CCCCchhhhhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC
Q 018381 1 MPNETLSKHLFHWEN----------------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 58 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~ 58 (357)
++||+|.+++..... ..+++.+++.++.||+.||.|||+.+ |+||||||+||+++.+
T Consensus 108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~NIli~~~ 186 (314)
T 2ivs_A 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNILVAEG 186 (314)
T ss_dssp CTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETT
T ss_pred cCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-CcccccchheEEEcCC
Confidence 468999999964321 34899999999999999999999999 9999999999999999
Q ss_pred CCeEEecCCcccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcc
Q 018381 59 GNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNF 131 (357)
Q Consensus 59 ~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~ 131 (357)
+.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus 187 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~----- 261 (314)
T 2ivs_A 187 RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL----- 261 (314)
T ss_dssp TEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-----
T ss_pred CCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----
Confidence 999999999998654322 2346788999999998889999999999999999999 8888765422211
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 132 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
...+........+..+++.+.++|.+||+.||++|||+.+++++|+.+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 262 FNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11111122233455677899999999999999999999999999987654
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-33 Score=250.91 Aligned_cols=179 Identities=17% Similarity=0.209 Sum_probs=146.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++. .....+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 91 ~~~~~L~~~l~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 91 AGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp CTTEEHHHHHT-TCTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CCCCCHHHHHH-hCCccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 46899999994 34567999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...+|+.|+|||++.+..++.++||||||+++|+|++ |+.||......... ..+........+..+++.+.
T Consensus 169 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~ 243 (287)
T 1u59_A 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-----AFIEQGKRMECPPECPPELY 243 (287)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH-----HHHHTTCCCCCCTTCCHHHH
T ss_pred ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH-----HHHhcCCcCCCCCCcCHHHH
Confidence 2345788999999988889999999999999999998 99887654222111 11111122334567788999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCccccccCCC
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 186 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~~ 186 (357)
++|.+||..||.+||++.+++++|+.+......+
T Consensus 244 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 244 ALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999987765554
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-33 Score=249.86 Aligned_cols=174 Identities=22% Similarity=0.283 Sum_probs=140.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. .+..+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 94 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 171 (281)
T 3cc6_A 94 YPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 171 (281)
T ss_dssp CTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC--------
T ss_pred CCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCccccccccccc
Confidence 478999999953 4567999999999999999999999999 9999999999999999999999999988654332
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...+|+.|+|||++.+..++.++||||||+++|+|++ |+.||......... ..+........+..+++.+.++
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~l 246 (281)
T 3cc6_A 172 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI-----GVLEKGDRLPKPDLCPPVLYTL 246 (281)
T ss_dssp -CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHH-----HHHHHTCCCCCCTTCCHHHHHH
T ss_pred ccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHH-----HHHhcCCCCCCCCCCCHHHHHH
Confidence 3356788999999998899999999999999999998 99887643221111 1111111223345567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
|.+||..||++|||+.+++++|+.+..
T Consensus 247 i~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 247 MTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 999999999999999999999987654
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-33 Score=249.49 Aligned_cols=175 Identities=21% Similarity=0.290 Sum_probs=142.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++.. ....+++.+++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 101 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (283)
T 3gen_A 101 MANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178 (283)
T ss_dssp CTTCBHHHHHHC-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred cCCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence 468999999953 3567999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....+|+.|+|||++.+..++.++||||||+++|+|++ |+.||........... +........+...++.+.++
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~l 253 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-----IAQGLRLYRPHLASEKVYTI 253 (283)
T ss_dssp TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-----HHTTCCCCCCTTCCHHHHHH
T ss_pred cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHH-----HhcccCCCCCCcCCHHHHHH
Confidence 23356778999999998899999999999999999998 8888765432221111 11112222344556789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
|.+||..+|.+|||+.+++++|..+...
T Consensus 254 i~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 254 MYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp HHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 9999999999999999999999877543
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-33 Score=256.07 Aligned_cols=170 Identities=21% Similarity=0.298 Sum_probs=133.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+.+|+|.+++. ..+.+++.++..++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 90 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~ 165 (343)
T 3dbq_A 90 CGNIDLNSWLK--KKKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVV 165 (343)
T ss_dssp CCSEEHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--------
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCccccccc
Confidence 35789999995 4578999999999999999999999999 99999999999997 678999999999865432
Q ss_pred -CccccCCCCCCcccccc-----------CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCC
Q 018381 76 -KSYSTNLAFTPPEYLRT-----------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 143 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ .............+
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~~ 242 (343)
T 3dbq_A 166 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEIEF 242 (343)
T ss_dssp ----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCTTSCCCC
T ss_pred CCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH---HHHHHhcCCcccCC
Confidence 24568999999999865 6678899999999999999999998865321111 11122222233344
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+...+..+.++|.+||+.||.+|||+.++++|..
T Consensus 243 ~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 243 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred cccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 5556678999999999999999999999998743
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-33 Score=254.01 Aligned_cols=165 Identities=21% Similarity=0.274 Sum_probs=136.5
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 92 ~g~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~ 168 (336)
T 3h4j_B 92 GGELFDYIV--EKKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC 168 (336)
T ss_dssp CEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCT
T ss_pred CCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccCCccccccc
Confidence 688999885 4567999999999999999999999999 999999999999999999999999999865543 3557
Q ss_pred cCCCCCCccccccCCC-CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 80 TNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
||+.|+|||++.+..+ +.++|||||||++|+|++|+.||........ ...+... ....+...++.+.++|.+|
T Consensus 169 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----~~~i~~~-~~~~p~~~s~~~~~li~~~ 242 (336)
T 3h4j_B 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----FKKVNSC-VYVMPDFLSPGAQSLIRRM 242 (336)
T ss_dssp TSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----BCCCCSS-CCCCCTTSCHHHHHHHHTT
T ss_pred CCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----HHHHHcC-CCCCcccCCHHHHHHHHHH
Confidence 8999999999987766 6799999999999999999999865422211 1111111 1124556778899999999
Q ss_pred ccCCCCCCCCHHHHHHHh
Q 018381 159 LQYEPRERPNAKSLVASL 176 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~l 176 (357)
|..||.+|||+.+++++-
T Consensus 243 L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 243 IVADPMQRITIQEIRRDP 260 (336)
T ss_dssp SCSSGGGSCCHHHHTTCH
T ss_pred cCCChhHCcCHHHHHhCh
Confidence 999999999999999873
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-33 Score=251.97 Aligned_cols=180 Identities=13% Similarity=0.126 Sum_probs=142.0
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee---CCCCCeEEecCCcccccCCC----
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDG---- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~---- 75 (357)
+|+|.+++.. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 88 ~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 165 (296)
T 4hgt_A 88 GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCc
Confidence 7899999942 4567999999999999999999999999 9999999999999 78899999999999855432
Q ss_pred -------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCC---CCh
Q 018381 76 -------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH---FSN 145 (357)
Q Consensus 76 -------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 145 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ...+........... ...
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 244 (296)
T 4hgt_A 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKMSTPIEVLCK 244 (296)
T ss_dssp BCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHHHHHSCHHHHTT
T ss_pred cCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh-hhhhhhhhcccccchhhhhhc
Confidence 244689999999999998999999999999999999999999865311000 000011111111100 113
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccccCC
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 185 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~ 185 (357)
.+++.+.++|.+||+.||++|||+.++++.|+.+......
T Consensus 245 ~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~ 284 (296)
T 4hgt_A 245 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 3467899999999999999999999999999988766443
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.98 E-value=7.4e-33 Score=253.98 Aligned_cols=170 Identities=16% Similarity=0.194 Sum_probs=136.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC---CCeEEecCCcccccCCCC-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~- 76 (357)
++||+|.+++. ....+++.++..++.||+.||.|||+.+ |+||||||+|||++.+ +.+||+|||+++......
T Consensus 110 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~ 186 (362)
T 2bdw_A 110 VTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186 (362)
T ss_dssp CCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence 57899999995 4568999999999999999999999999 9999999999999865 459999999998665432
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...+.......+++.+.+|
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~l 264 (362)
T 2bdw_A 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG--AYDYPSPEWDTVTPEAKSL 264 (362)
T ss_dssp CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCCTTGGGGSCHHHHHH
T ss_pred cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC--CCCCCcccccCCCHHHHHH
Confidence 457899999999999888999999999999999999999998764322211110000 0011111113457889999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
|.+||..||++|||+.++++|
T Consensus 265 i~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 265 IDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHcCCChhhCcCHHHHhcC
Confidence 999999999999999999987
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.8e-33 Score=249.25 Aligned_cols=173 Identities=20% Similarity=0.310 Sum_probs=141.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
+++|+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ..
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 180 (284)
T 2a19_B 102 CDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTR 180 (284)
T ss_dssp CCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCCCC
T ss_pred cCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEECcchhheeccccccccc
Confidence 46899999996545578999999999999999999999999 999999999999999999999999998865543 34
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
..||+.|+|||++.+..++.++||||||+++|+|++|..|+.... .... ... ....+...+..+.++|.+
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-~~~~-----~~~----~~~~~~~~~~~~~~li~~ 250 (284)
T 2a19_B 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-KFFT-----DLR----DGIISDIFDKKEKTLLQK 250 (284)
T ss_dssp CCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-HHHH-----HHH----TTCCCTTSCHHHHHHHHH
T ss_pred cCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-HHHH-----Hhh----cccccccCCHHHHHHHHH
Confidence 568999999999998889999999999999999999997754321 1110 111 112234456789999999
Q ss_pred hccCCCCCCCCHHHHHHHhCccccccC
Q 018381 158 CLQYEPRERPNAKSLVASLTPLQKEAE 184 (357)
Q Consensus 158 cl~~~p~~Rps~~~v~~~l~~~~~~~~ 184 (357)
||..||.+|||+.+++++|+.+.....
T Consensus 251 ~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 251 LLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred HccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 999999999999999999988876543
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=2.9e-33 Score=254.03 Aligned_cols=175 Identities=21% Similarity=0.268 Sum_probs=138.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 128 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 205 (333)
T 1mqb_A 128 MENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY 205 (333)
T ss_dssp CTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC------------
T ss_pred CCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhcccccccc
Confidence 468899999953 4578999999999999999999999999 9999999999999999999999999998654321
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...+|+.|+|||++.+..++.++|||||||++|+|++ |..||......... ..+........+..++..+.
T Consensus 206 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~ 280 (333)
T 1mqb_A 206 TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM-----KAINDGFRLPTPMDCPSAIY 280 (333)
T ss_dssp -----CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-----HHHHTTCCCCCCTTCBHHHH
T ss_pred ccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHH-----HHHHCCCcCCCcccCCHHHH
Confidence 1235778999999998899999999999999999999 98887654222111 11111122233456778899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
++|.+||..+|.+||++.++++.|+.+...
T Consensus 281 ~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 281 QLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999999887654
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.9e-33 Score=251.27 Aligned_cols=177 Identities=20% Similarity=0.248 Sum_probs=142.5
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
+++|+|.+++.... ...+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kL~Df 186 (327)
T 1fvr_A 108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADF 186 (327)
T ss_dssp CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCT
T ss_pred CCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeEEEccc
Confidence 46899999995321 247999999999999999999999999 999999999999999999999999
Q ss_pred CcccccCC---CCccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCC
Q 018381 67 GLMKNSRD---GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGH 142 (357)
Q Consensus 67 g~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
|+++.... .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.......... .+.......
T Consensus 187 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~-----~~~~~~~~~ 261 (327)
T 1fvr_A 187 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE-----KLPQGYRLE 261 (327)
T ss_dssp TCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-----HGGGTCCCC
T ss_pred CcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHH-----HhhcCCCCC
Confidence 99874332 223456889999999988888999999999999999998 998886543222211 111112223
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
.+..+++.+.++|.+||..||.+|||+.+++++|..+....
T Consensus 262 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 262 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 45567789999999999999999999999999998877654
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.98 E-value=2.1e-33 Score=257.65 Aligned_cols=173 Identities=18% Similarity=0.113 Sum_probs=126.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC--eEEecCCcccccCC---C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN--PRLSCFGLMKNSRD---G 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~---~ 75 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+++.... .
T Consensus 98 ~~~~~L~~~l~--~~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~ 174 (361)
T 3uc3_A 98 ASGGELYERIC--NAGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 174 (361)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCC
Confidence 57899999995 3567999999999999999999999999 999999999999987765 99999999874332 2
Q ss_pred CccccCCCCCCccccccCCCCcc-ccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPE-SVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~-~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.......................+.....++.+.+|
T Consensus 175 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 254 (361)
T 3uc3_A 175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHL 254 (361)
T ss_dssp ------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHH
T ss_pred CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHH
Confidence 35679999999999988777655 89999999999999999998753211000001111111111111222456889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 018381 155 ASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l 176 (357)
|.+||+.||.+|||+.++++|-
T Consensus 255 i~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 255 ISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp HHHHSCSCTTTSCCHHHHHTSH
T ss_pred HHHHccCChhHCcCHHHHHhCc
Confidence 9999999999999999999873
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=8.7e-33 Score=249.31 Aligned_cols=177 Identities=14% Similarity=0.101 Sum_probs=138.1
Q ss_pred CCCCchhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee----CCCCCeEEecCCcccccCCC
Q 018381 1 MPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~ 75 (357)
++||+|.+++.... ...+++.+++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp CTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 46899999996422 234999999999999999999999999 9999999999999 77788999999999865543
Q ss_pred C---ccccCCCCCCccccc--------cCCCCccccccchHHHHHHHHhCCCCCCcchhH-----h----hhcCc---c-
Q 018381 76 K---SYSTNLAFTPPEYLR--------TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD-----L----IRGKN---F- 131 (357)
Q Consensus 76 ~---~~~gt~~y~aPE~~~--------~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-----~----~~~~~---~- 131 (357)
. ...||+.|+|||++. +..++.++|||||||++|||++|+.||...... . ..... .
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (319)
T 4euu_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (319)
T ss_dssp CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCE
T ss_pred CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccch
Confidence 2 456899999999986 467899999999999999999999987532110 0 00000 0
Q ss_pred --cccc--------ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCc
Q 018381 132 --LMLM--------DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 132 --~~~~--------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
.... ........+...+..+.++|.+||+.||++|||+.+++++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred hhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 0000 0011123456788899999999999999999999999999654
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.7e-33 Score=249.78 Aligned_cols=176 Identities=19% Similarity=0.225 Sum_probs=137.8
Q ss_pred CCCCchhhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-
Q 018381 1 MPNETLSKHLFH----WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~----~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~- 75 (357)
+++|+|.+++.. .....+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 123 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~ 201 (313)
T 3brb_A 123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201 (313)
T ss_dssp CTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECSCSCC-------
T ss_pred ccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEeecCcceeccccc
Confidence 468999999842 24567999999999999999999999999 999999999999999999999999998765432
Q ss_pred -----CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHH
Q 018381 76 -----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 149 (357)
Q Consensus 76 -----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
....+++.|+|||++.+..++.++||||||+++|+|++ |..||......... ...........+..+++
T Consensus 202 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 276 (313)
T 3brb_A 202 YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY-----DYLLHGHRLKQPEDCLD 276 (313)
T ss_dssp ---------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-----HHHHTTCCCCCBTTCCH
T ss_pred ccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH-----HHHHcCCCCCCCccccH
Confidence 23356789999999998889999999999999999999 77776543221111 11111112234456778
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+.++|.+||..||.+|||+.+++++|+.+...
T Consensus 277 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 277 ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 899999999999999999999999999887654
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.7e-33 Score=257.84 Aligned_cols=169 Identities=21% Similarity=0.306 Sum_probs=133.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+.+|+|.+++. ....+++.+++.++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 137 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~ 212 (390)
T 2zmd_A 137 CGNIDLNSWLK--KKKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVV 212 (390)
T ss_dssp CCSEEHHHHHH--HCSSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC--------
T ss_pred cCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCCcccc
Confidence 35789999995 3458999999999999999999999999 99999999999996 689999999999865432
Q ss_pred -CccccCCCCCCcccccc-----------CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCC
Q 018381 76 -KSYSTNLAFTPPEYLRT-----------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 143 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... ..+...........+
T Consensus 213 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~~~~~~~~~~~~~ 289 (390)
T 2zmd_A 213 KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIEF 289 (390)
T ss_dssp -CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHHCTTSCCCC
T ss_pred CCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH---HHHHHHhCccccCCC
Confidence 24579999999999865 367889999999999999999999986532111 011122222222334
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
+...+..+.+||.+||..||++|||+.+++++.
T Consensus 290 ~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 444567899999999999999999999999874
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-33 Score=254.56 Aligned_cols=179 Identities=21% Similarity=0.296 Sum_probs=145.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++. ...+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 117 ~~~~~L~~~l~---~~~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 192 (318)
T 3lxp_A 117 VPLGSLRDYLP---RHSIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 192 (318)
T ss_dssp CTTCBHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEE
T ss_pred ccCCcHHHHHh---hCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCccccccccccccccc
Confidence 46899999994 456999999999999999999999999 9999999999999999999999999998665432
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhh----------cCccccccccccCCCC
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR----------GKNFLMLMDSCLEGHF 143 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 143 (357)
...+|+.|+|||++.+..++.++||||||+++|+|++|+.||......... .......+........
T Consensus 193 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (318)
T 3lxp_A 193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPR 272 (318)
T ss_dssp C---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCC
T ss_pred cccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCC
Confidence 335678899999999888999999999999999999999887653221110 0111222222333445
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
+..++..+.++|.+||..||.+|||+.++++.|+.+.+..
T Consensus 273 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 273 PDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 6677889999999999999999999999999998876654
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.6e-33 Score=251.79 Aligned_cols=177 Identities=19% Similarity=0.300 Sum_probs=142.4
Q ss_pred CCCCchhhhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEe
Q 018381 1 MPNETLSKHLFHWEN----------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 64 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~ 64 (357)
+++|+|.+++..... ..+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+
T Consensus 109 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~ 187 (313)
T 1t46_A 109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKIC 187 (313)
T ss_dssp CTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTTEEEEC
T ss_pred CCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCCCCEEEc
Confidence 468999999964322 25999999999999999999999999 9999999999999999999999
Q ss_pred cCCcccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccc
Q 018381 65 CFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDS 137 (357)
Q Consensus 65 Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~ 137 (357)
|||+++...... ...+|+.|+|||++.+..++.++|||||||++|+|++ |..||........ .......
T Consensus 188 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~----~~~~~~~ 263 (313)
T 1t46_A 188 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK----FYKMIKE 263 (313)
T ss_dssp CCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH----HHHHHHH
T ss_pred cccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH----HHHHhcc
Confidence 999998665432 2346788999999998899999999999999999999 8888765321110 1111112
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 138 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 138 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
......+...+..+.++|.+||..||.+|||+.+++++|+.+...
T Consensus 264 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 264 GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 222233455678899999999999999999999999999876554
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=6.8e-33 Score=253.07 Aligned_cols=171 Identities=18% Similarity=0.213 Sum_probs=130.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC---CCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~-- 75 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 130 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 206 (349)
T 2w4o_A 130 VTGGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL 206 (349)
T ss_dssp CCSCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence 57899999995 4567999999999999999999999999 999999999999975 889999999999865433
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||............+... ......+.....+..+.++
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~l 285 (349)
T 2w4o_A 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC-EYYFISPWWDEVSLNAKDL 285 (349)
T ss_dssp ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTT-CCCCCTTTTTTSCHHHHHH
T ss_pred cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhC-CCccCCchhhhCCHHHHHH
Confidence 34578999999999998889999999999999999999999986543221110000000 0111112234567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
|.+||..||++|||+.+++++
T Consensus 286 i~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 286 VRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp HHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHccCChhhCcCHHHHhcC
Confidence 999999999999999999997
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.4e-33 Score=262.07 Aligned_cols=166 Identities=22% Similarity=0.304 Sum_probs=138.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----G 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~ 75 (357)
|+||+|.+++. ..+.+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++.... .
T Consensus 230 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 306 (446)
T 4ejn_A 230 ANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 306 (446)
T ss_dssp CSSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccCCCccc
Confidence 57899999995 45689999999999999999999998 88 99999999999999999999999999985432 2
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
....||+.|+|||++.+..++.++|||||||++|||++|+.||............. .. ...++...++.+.+||
T Consensus 307 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~----~~--~~~~p~~~~~~~~~li 380 (446)
T 4ejn_A 307 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL----ME--EIRFPRTLGPEAKSLL 380 (446)
T ss_dssp CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----HC--CCCCCTTSCHHHHHHH
T ss_pred ccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH----hC--CCCCCccCCHHHHHHH
Confidence 35679999999999999999999999999999999999999987653322211111 11 1124556678899999
Q ss_pred HHhccCCCCCCC-----CHHHHHHH
Q 018381 156 SRCLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 156 ~~cl~~~p~~Rp-----s~~~v~~~ 175 (357)
.+||..||.+|| ++.++++|
T Consensus 381 ~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 381 SGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp HHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHcccCHHHhCCCCCCCHHHHHhC
Confidence 999999999999 99999986
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=4.7e-33 Score=271.73 Aligned_cols=176 Identities=17% Similarity=0.218 Sum_probs=143.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
|+||+|.+++.. ....+++.+++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 417 ~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 417 AGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp CTTCBHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred CCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 579999999953 4667999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...+|+.|+|||++.++.++.++|||||||++|||++ |+.||....... +...+....+...+..+++.+.
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-----~~~~i~~~~~~~~p~~~~~~l~ 569 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----VMAFIEQGKRMECPPECPPELY 569 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-----HHHHHHTTCCCCCCTTCCHHHH
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-----HHHHHHcCCCCCCCCcCCHHHH
Confidence 1234688999999998999999999999999999998 998887542221 1112222223345667889999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
+||.+||..+|++||++.+|++.|+.+....
T Consensus 570 ~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 570 ALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998875543
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=8.8e-33 Score=250.17 Aligned_cols=172 Identities=12% Similarity=0.115 Sum_probs=137.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC---CCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~-- 75 (357)
++||+|.+++.......+++.+++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 111 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 189 (327)
T 3lm5_A 111 AAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE 189 (327)
T ss_dssp CTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-----
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCccc
Confidence 57899999996555678999999999999999999999999 999999999999997 789999999999866543
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||............ ..............+++.+.++
T Consensus 190 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~~~~~~~l 267 (327)
T 3lm5_A 190 LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI--SQVNVDYSEETFSSVSQLATDF 267 (327)
T ss_dssp ----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHTCCCCCTTTTTTSCHHHHHH
T ss_pred cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHH--HhcccccCchhhcccCHHHHHH
Confidence 3457899999999999999999999999999999999999998764322211110 0011112222334567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
|.+||+.||.+|||+.+++++
T Consensus 268 i~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 268 IQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHcCCChhhCcCHHHHhCC
Confidence 999999999999999999987
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=6.4e-33 Score=250.63 Aligned_cols=171 Identities=17% Similarity=0.146 Sum_probs=136.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ....+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 163 (323)
T 3tki_A 87 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (323)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred CCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence 47899999994 4567999999999999999999999999 999999999999999999999999999754321
Q ss_pred -CccccCCCCCCccccccCCC-CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||......... ................+++.+.+
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 240 (323)
T 3tki_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE---YSDWKEKKTYLNPWKKIDSAPLA 240 (323)
T ss_dssp BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHH---HHHHHTTCTTSTTGGGSCHHHHH
T ss_pred cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHH---HHHHhcccccCCccccCCHHHHH
Confidence 24578999999999987665 77899999999999999999998653211000 00001111111112346778999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhC
Q 018381 154 LASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
||.+||..||.+|||+.+++++-.
T Consensus 241 li~~~L~~dP~~R~t~~eil~h~~ 264 (323)
T 3tki_A 241 LLHKILVENPSARITIPDIKKDRW 264 (323)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred HHHHHccCChhhCcCHHHHhhChh
Confidence 999999999999999999998743
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.9e-33 Score=244.18 Aligned_cols=176 Identities=20% Similarity=0.232 Sum_probs=141.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCeeeCCCCCeEEecCCcccccCCCCccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 79 (357)
++||+|.+++....+..+++.+++.++.||+.||.|||+.+ +++||||||+||+++.++.++|+|||+..... .....
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-~~~~~ 169 (271)
T 3kmu_A 91 MPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-SPGRM 169 (271)
T ss_dssp CTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-CTTCB
T ss_pred cCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec-ccCcc
Confidence 47899999997544457999999999999999999999975 49999999999999999999999988765433 23457
Q ss_pred cCCCCCCccccccCCCCc---cccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 80 TNLAFTPPEYLRTGRVIP---ESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~---~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
||+.|+|||++.+...+. ++|||||||++|+|++|+.||.......... ...........+..+++.+.++|.
T Consensus 170 ~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~ 245 (271)
T 3kmu_A 170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM----KVALEGLRPTIPPGISPHVSKLMK 245 (271)
T ss_dssp SCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH----HHHHSCCCCCCCTTCCHHHHHHHH
T ss_pred CCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH----HHHhcCCCCCCCCCCCHHHHHHHH
Confidence 899999999998765544 7999999999999999999987543222211 111122223445667789999999
Q ss_pred HhccCCCCCCCCHHHHHHHhCcccc
Q 018381 157 RCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
+||+.||++|||+.++++.|+.+.+
T Consensus 246 ~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 246 ICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhc
Confidence 9999999999999999999987653
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-33 Score=249.32 Aligned_cols=176 Identities=20% Similarity=0.315 Sum_probs=137.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
+++|+|.+++.......+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 175 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 175 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccccCCC
Confidence 46789999995433334899999999999999999999999 999999999999999999999999998755443 3446
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
+++.|+|||++.+..++.++||||||+++|+|++ |..||........ ...+........+..+++.+.++|.+|
T Consensus 176 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~~ 250 (278)
T 1byg_A 176 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----VPRVEKGYKMDAPDGCPPAVYEVMKNC 250 (278)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH-----HHHHTTTCCCCCCTTCCHHHHHHHHHH
T ss_pred ccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHhcCCCCCCcccCCHHHHHHHHHH
Confidence 7889999999998889999999999999999998 8888765422111 111111222334556778999999999
Q ss_pred ccCCCCCCCCHHHHHHHhCccccc
Q 018381 159 LQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
|..||++|||+.++++.|+.+...
T Consensus 251 l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 251 WHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hcCChhhCCCHHHHHHHHHHHHhh
Confidence 999999999999999999887643
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=8.6e-33 Score=254.70 Aligned_cols=169 Identities=17% Similarity=0.213 Sum_probs=136.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++..... .+
T Consensus 97 ~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 173 (384)
T 4fr4_A 97 LLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT 173 (384)
T ss_dssp CTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccCCCceec
Confidence 57999999995 4678999999999999999999999999 999999999999999999999999999865433 35
Q ss_pred cccCCCCCCcccccc---CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
..||+.|+|||++.+ ..++.++|+|||||++|+|++|+.||.......... ...... .....++...+..+.+|
T Consensus 174 ~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~--~~~~~~-~~~~~~p~~~s~~~~~l 250 (384)
T 4fr4_A 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE--IVHTFE-TTVVTYPSAWSQEMVSL 250 (384)
T ss_dssp CCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHH--HHHHHH-HCCCCCCTTSCHHHHHH
T ss_pred cCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHH--HHHHHh-hcccCCCCcCCHHHHHH
Confidence 679999999999974 458899999999999999999999986431111000 000000 11123455677899999
Q ss_pred HHHhccCCCCCCCC-HHHHHHH
Q 018381 155 ASRCLQYEPRERPN-AKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps-~~~v~~~ 175 (357)
|.+||+.||.+||+ +.+++.|
T Consensus 251 i~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 251 LKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp HHHHSCSSGGGSCCSHHHHHTS
T ss_pred HHHHhcCCHhHhcccHHHHHcC
Confidence 99999999999998 7888764
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=9.7e-33 Score=255.01 Aligned_cols=171 Identities=16% Similarity=0.131 Sum_probs=137.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC--CCCeEEecCCcccccCCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ--DGNPRLSCFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~-- 76 (357)
++||+|.+++. ..+..+++.+++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~-~~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 130 LSGGELFDRIA-AEDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp CCCCBHHHHTT-CTTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCCcHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 57899999994 24567999999999999999999999999 999999999999974 5679999999998665432
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..||........... + ......+.......+++.+.++|
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~-i-~~~~~~~~~~~~~~~s~~~~~li 285 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQN-V-KRCDWEFDEDAFSSVSPEAKDFI 285 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH-H-HHCCCCCCSSTTTTSCHHHHHHH
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHH-H-HhCCCCCCccccccCCHHHHHHH
Confidence 34689999999999988899999999999999999999999876432211110 0 00011112222345678899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 018381 156 SRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+||..||++|||+.+++++
T Consensus 286 ~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 286 KNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp HTTSCSSGGGSCCHHHHHTS
T ss_pred HHHcCCChhHCcCHHHHhhC
Confidence 99999999999999999987
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=3.2e-33 Score=248.31 Aligned_cols=176 Identities=20% Similarity=0.298 Sum_probs=145.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 169 (288)
T 3kfa_A 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169 (288)
T ss_dssp CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence 46899999997656678999999999999999999999999 9999999999999999999999999998655432
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..||....... ....+........+..+++.+.++
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~l 244 (288)
T 3kfa_A 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYELLEKDYRMERPEGCPEKVYEL 244 (288)
T ss_dssp TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-----HHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHhccCCCCCCCCCCHHHHHH
Confidence 2345788999999998899999999999999999999 887776532211 111222223334456677899999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
+.+||..||.+|||+.++++.|+.+...
T Consensus 245 i~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 245 MRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999876554
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.3e-33 Score=253.21 Aligned_cols=170 Identities=16% Similarity=0.277 Sum_probs=136.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.... ..
T Consensus 92 ~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~ 168 (345)
T 3a8x_A 92 VNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 168 (345)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBC
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccCCCCccc
Confidence 57899999995 3467999999999999999999999999 99999999999999999999999999985322 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhc-----CccccccccccCCCCChhhHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-----KNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
...||+.|+|||++.+..++.++|+|||||++|||++|+.||.......... ......... ...++...+..+
T Consensus 169 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~ 246 (345)
T 3a8x_A 169 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKA 246 (345)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTSCHHH
T ss_pred ccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCCCHHH
Confidence 5679999999999999899999999999999999999999985421100000 000011111 123455677889
Q ss_pred HHHHHHhccCCCCCCCCH------HHHHHH
Q 018381 152 VRLASRCLQYEPRERPNA------KSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~------~~v~~~ 175 (357)
.++|.+||+.||.+||++ .+++.|
T Consensus 247 ~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 247 ASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp HHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred HHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 999999999999999985 678776
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-33 Score=255.87 Aligned_cols=174 Identities=18% Similarity=0.183 Sum_probs=133.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
|++|+|.+++.......+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~ 186 (389)
T 3gni_B 108 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQR 186 (389)
T ss_dssp CTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECS
T ss_pred cCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeecccccccc
Confidence 57899999997655678999999999999999999999999 99999999999999999999999998753211
Q ss_pred -----CCccccCCCCCCcccccc--CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccc-----------
Q 018381 75 -----GKSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD----------- 136 (357)
Q Consensus 75 -----~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~----------- 136 (357)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..................
T Consensus 187 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (389)
T 3gni_B 187 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 266 (389)
T ss_dssp CBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------------
T ss_pred ccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccc
Confidence 123468899999999987 57899999999999999999999998653111100000000000
Q ss_pred -----------------------------cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 137 -----------------------------SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 137 -----------------------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.......+...++.+.+||.+||+.||++|||+.++++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 267 ELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000111233456789999999999999999999999987
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-33 Score=254.20 Aligned_cols=166 Identities=21% Similarity=0.228 Sum_probs=136.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccC----CCC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++... ...
T Consensus 121 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~ 197 (373)
T 2r5t_A 121 INGGELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTS 197 (373)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCccccccccCCCccc
Confidence 57999999995 3567999999999999999999999999 9999999999999999999999999998532 234
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+..||+.|+|||++.+..++.++|+|||||++|||++|..||.......+... ..... ..++...+..+.++|.
T Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~----i~~~~--~~~~~~~~~~~~~li~ 271 (373)
T 2r5t_A 198 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN----ILNKP--LQLKPNITNSARHLLE 271 (373)
T ss_dssp SBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHH----HHHSC--CCCCSSSCHHHHHHHH
T ss_pred cccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH----HHhcc--cCCCCCCCHHHHHHHH
Confidence 56799999999999998999999999999999999999999876533222111 11111 1234556788999999
Q ss_pred HhccCCCCCCCCHH----HHHHH
Q 018381 157 RCLQYEPRERPNAK----SLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~----~v~~~ 175 (357)
+||+.||.+||++. +++.|
T Consensus 272 ~lL~~dp~~R~~~~~~~~~i~~h 294 (373)
T 2r5t_A 272 GLLQKDRTKRLGAKDDFMEIKSH 294 (373)
T ss_dssp HHTCSSGGGSTTTTTTHHHHHTS
T ss_pred HHcccCHHhCCCCCCCHHHHhCC
Confidence 99999999999974 55544
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-33 Score=247.82 Aligned_cols=176 Identities=20% Similarity=0.286 Sum_probs=142.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++....+..+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 167 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccc
Confidence 47899999995322347999999999999999999999999 9999999999999999999999999998654432
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...+|+.|+|||++.++.++.++||||||+++|+|++ |..||......... ..+........+..+++.+.++
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~l 242 (279)
T 1qpc_A 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-----QNLERGYRMVRPDNCPEELYQL 242 (279)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-----HHHHTTCCCCCCTTCCHHHHHH
T ss_pred cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHH-----HHHhcccCCCCcccccHHHHHH
Confidence 3346788999999988889999999999999999999 88787654322211 1111112223345677899999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
+.+||..||++|||+.++++.|+.+...
T Consensus 243 i~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 243 MRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999887654
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-32 Score=243.45 Aligned_cols=177 Identities=26% Similarity=0.450 Sum_probs=141.3
Q ss_pred CCCCchhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----
Q 018381 1 MPNETLSKHLFHW-ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---- 75 (357)
++||+|.+++... ...++++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 190 (307)
T 2nru_A 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190 (307)
T ss_dssp CTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE
T ss_pred cCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEcCCCcEEEeecccccccccccccc
Confidence 4789999999532 2457999999999999999999999999 999999999999999999999999998765432
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHh--------hhc--CccccccccccCCCC
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL--------IRG--KNFLMLMDSCLEGHF 143 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~~ 143 (357)
....||+.|+|||++.+ .++.++||||||+++|+|++|..||....... ... ..+...++... ...
T Consensus 191 ~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 268 (307)
T 2nru_A 191 MTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDA 268 (307)
T ss_dssp ECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC-SCC
T ss_pred cccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccc-ccc
Confidence 23468999999998874 58889999999999999999998876431110 000 01111112222 234
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
+...++.+.+++.+||..||.+|||+.+++++|+.+.
T Consensus 269 ~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 5677889999999999999999999999999998764
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-33 Score=259.68 Aligned_cols=172 Identities=18% Similarity=0.151 Sum_probs=137.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
|+||+|.+++.. ..+.+++..+..++.||+.||.|||+.+ ||||||||+|||++.+|.+||+|||+++.....
T Consensus 156 ~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~ 233 (437)
T 4aw2_A 156 YVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 233 (437)
T ss_dssp CTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred CCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCccc
Confidence 579999999953 3578999999999999999999999999 999999999999999999999999999765433
Q ss_pred CccccCCCCCCccccc-----cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 76 KSYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
....||+.|+|||++. .+.++.++|||||||++|||++|+.||....................+. .....++++
T Consensus 234 ~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p-~~~~~~s~~ 312 (437)
T 4aw2_A 234 SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP-TQVTDVSEN 312 (437)
T ss_dssp CSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC-SSCCCSCHH
T ss_pred ccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCC-cccccCCHH
Confidence 2357999999999997 4568999999999999999999999987653222211111000000111 112346788
Q ss_pred HHHHHHHhccCCCCC--CCCHHHHHHH
Q 018381 151 LVRLASRCLQYEPRE--RPNAKSLVAS 175 (357)
Q Consensus 151 ~~~li~~cl~~~p~~--Rps~~~v~~~ 175 (357)
+.+||.+||..+|++ ||++.++++|
T Consensus 313 ~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 313 AKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred HHHHHHHHhcccccccCCCCHHHHhCC
Confidence 999999999998888 9999999987
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-32 Score=255.20 Aligned_cols=170 Identities=21% Similarity=0.182 Sum_probs=137.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
|+||+|.+++. +..+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 151 ~~gg~L~~~l~---~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~ 226 (410)
T 3v8s_A 151 MPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 226 (410)
T ss_dssp CTTEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEEC
T ss_pred CCCCcHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccc
Confidence 57999999994 457999999999999999999999999 999999999999999999999999999865543
Q ss_pred CccccCCCCCCccccccCC----CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGR----VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
.+..||+.|+|||++.+.. ++.++|+|||||++|||++|+.||................ ..+..+.....++++
T Consensus 227 ~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~--~~~~~p~~~~~s~~~ 304 (410)
T 3v8s_A 227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK--NSLTFPDDNDISKEA 304 (410)
T ss_dssp CSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH--HHCCCCTTCCCCHHH
T ss_pred cCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcc--ccccCCCcccccHHH
Confidence 2567999999999998655 7889999999999999999999987653222211111000 011111123467889
Q ss_pred HHHHHHhccCCCCC--CCCHHHHHHHh
Q 018381 152 VRLASRCLQYEPRE--RPNAKSLVASL 176 (357)
Q Consensus 152 ~~li~~cl~~~p~~--Rps~~~v~~~l 176 (357)
.+||.+||..+|.+ ||++.+|++|-
T Consensus 305 ~~li~~lL~~~~~rlgR~~~~ei~~Hp 331 (410)
T 3v8s_A 305 KNLICAFLTDREVRLGRNGVEEIKRHL 331 (410)
T ss_dssp HHHHHHHSSCGGGCTTSSCHHHHHTSG
T ss_pred HHHHHHHccChhhhCCCCCHHHHhcCc
Confidence 99999999999988 99999999973
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-33 Score=251.58 Aligned_cols=178 Identities=19% Similarity=0.336 Sum_probs=142.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++.+++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 107 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 184 (302)
T 4e5w_A 107 LPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYT 184 (302)
T ss_dssp CTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEE
T ss_pred CCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCCCccee
Confidence 468999999943 4567999999999999999999999999 9999999999999999999999999998655432
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhh----------cCccccccccccCCCC
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR----------GKNFLMLMDSCLEGHF 143 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 143 (357)
...||..|+|||++.+..++.++||||||+++|+|++|..|+......... ................
T Consensus 185 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (302)
T 4e5w_A 185 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC 264 (302)
T ss_dssp CCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCC
T ss_pred ccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCC
Confidence 345778899999999888999999999999999999999875432111000 0011111122223344
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
+..+++.+.++|.+||..||.+|||+.++++.|+.+.
T Consensus 265 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 265 PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 5667889999999999999999999999999987653
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-33 Score=252.29 Aligned_cols=177 Identities=20% Similarity=0.307 Sum_probs=143.0
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
+++|+|.+++.... ...+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 123 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Df 201 (334)
T 2pvf_A 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADF 201 (334)
T ss_dssp CTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCC
T ss_pred CCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcCCCCEEEccc
Confidence 46899999996422 135999999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++..... ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.......+.. .+....
T Consensus 202 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-----~~~~~~ 276 (334)
T 2pvf_A 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-----LLKEGH 276 (334)
T ss_dssp TTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH-----HHHHTC
T ss_pred cccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHH-----HHhcCC
Confidence 999865433 22346788999999988889999999999999999999 888876543222211 111111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
....+..++..+.++|.+||..||.+|||+.+++++|+.+....
T Consensus 277 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 277 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 22345567788999999999999999999999999999886653
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-33 Score=269.19 Aligned_cols=176 Identities=23% Similarity=0.279 Sum_probs=145.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
|++|+|.++|....+..+++.+++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 421 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTT
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecc
Confidence 57899999995433467999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....+++.|+|||++.++.++.++|||||||++|||++ |+.||......... ..+....+...+..+++.+.+|
T Consensus 422 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~~l 496 (535)
T 2h8h_A 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-----DQVERGYRMPCPPECPESLHDL 496 (535)
T ss_dssp CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHH-----HHHHTTCCCCCCTTCCHHHHHH
T ss_pred cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHHHH
Confidence 23346788999999998999999999999999999999 88887654322211 1111222334456778899999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
|.+||..||++|||+.+|++.|+.+...
T Consensus 497 i~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 497 MCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 9999999999999999999999887654
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-33 Score=251.50 Aligned_cols=175 Identities=15% Similarity=0.169 Sum_probs=118.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC---CCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~-- 75 (357)
++||+|.+++.......+++.+++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 108 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~ 186 (336)
T 3fhr_A 108 MEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL 186 (336)
T ss_dssp CTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-----
T ss_pred cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceecccccc
Confidence 57899999997555568999999999999999999999999 999999999999976 455999999999865433
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccccc--ccccCCCCChhhHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM--DSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 153 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||................. ...........+++.+.+
T Consensus 187 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (336)
T 3fhr_A 187 QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQ 266 (336)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHH
T ss_pred ccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHH
Confidence 345789999999999888889999999999999999999999865432222111111111 111111122356788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 018381 154 LASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l 176 (357)
+|.+||..||.+|||+.+++++-
T Consensus 267 li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 267 LIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHCCCChhHCcCHHHHhcCc
Confidence 99999999999999999999973
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-32 Score=258.87 Aligned_cols=166 Identities=20% Similarity=0.277 Sum_probs=137.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .+
T Consensus 98 ~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~ 174 (476)
T 2y94_A 98 VSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT 174 (476)
T ss_dssp CSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhccccccccc
Confidence 47899999995 4578999999999999999999999999 999999999999999999999999999866543 35
Q ss_pred cccCCCCCCccccccCCC-CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
..||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.......... ...... ...+...++.+.++|.
T Consensus 175 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~----~i~~~~--~~~p~~~s~~~~~Li~ 248 (476)
T 2y94_A 175 SCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK----KICDGI--FYTPQYLNPSVISLLK 248 (476)
T ss_dssp CCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHH----HHHTTC--CCCCTTCCHHHHHHHH
T ss_pred cCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHH----HHhcCC--cCCCccCCHHHHHHHH
Confidence 579999999999988765 679999999999999999999987543222111 111111 1234456678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||+.||.+|||+.++++|
T Consensus 249 ~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 249 HMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp HHTCSSTTTSCCHHHHHTC
T ss_pred HHcCCCchhCcCHHHHHhC
Confidence 9999999999999999986
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-33 Score=254.25 Aligned_cols=169 Identities=19% Similarity=0.176 Sum_probs=137.3
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCccccCC
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL 82 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~ 82 (357)
.|+|.+++.. .+..+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.........||+
T Consensus 137 ~g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~gt~ 214 (348)
T 1u5q_A 137 LGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTP 214 (348)
T ss_dssp SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCG
T ss_pred CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccCCc
Confidence 3678888742 4578999999999999999999999999 9999999999999999999999999998877777788999
Q ss_pred CCCCccccc---cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 83 AFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 83 ~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
.|+|||++. ++.++.++|||||||++|||++|+.||.......... ...........+...++.+.++|.+||
T Consensus 215 ~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~~l 290 (348)
T 1u5q_A 215 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY----HIAQNESPALQSGHWSEYFRNFVDSCL 290 (348)
T ss_dssp GGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH----HHHHSCCCCCCCTTSCHHHHHHHHHHT
T ss_pred ceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH----HHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence 999999984 4678999999999999999999999876542211110 111111111123345678999999999
Q ss_pred cCCCCCCCCHHHHHHHhC
Q 018381 160 QYEPRERPNAKSLVASLT 177 (357)
Q Consensus 160 ~~~p~~Rps~~~v~~~l~ 177 (357)
+.||++|||+.+++++..
T Consensus 291 ~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 291 QKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp CSSGGGSCCHHHHTTCHH
T ss_pred ccChhhCcCHHHHhhChh
Confidence 999999999999998743
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-33 Score=247.97 Aligned_cols=174 Identities=18% Similarity=0.238 Sum_probs=142.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++. ..+.+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 99 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (291)
T 1xbb_A 99 AELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175 (291)
T ss_dssp CTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred CCCCCHHHHHH--hCcCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCccc
Confidence 46899999995 3567999999999999999999999999 9999999999999999999999999998654432
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...+|+.|+|||++.+..++.++||||||+++|+|++ |+.||......... ..+........+..+++.+.
T Consensus 176 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~ 250 (291)
T 1xbb_A 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-----AMLEKGERMGCPAGCPREMY 250 (291)
T ss_dssp C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-----HHHHTTCCCCCCTTCCHHHH
T ss_pred ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHH
Confidence 2235688999999988888999999999999999999 99887654322211 11111122234556788999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
++|.+||..||++|||+.++++.|+.+...
T Consensus 251 ~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 251 DLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999887554
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-32 Score=250.10 Aligned_cols=172 Identities=19% Similarity=0.169 Sum_probs=134.1
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-------------------------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ------------------------- 57 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~------------------------- 57 (357)
+|+|.+++.......+++.++..++.||+.||.|||+.+ |+||||||+|||++.
T Consensus 119 ~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (360)
T 3llt_A 119 GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTK 197 (360)
T ss_dssp CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEES
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEEccccccccccchhcccccccccccccC
Confidence 789999997655567999999999999999999999999 999999999999975
Q ss_pred CCCeEEecCCcccccCC-CCccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC-------
Q 018381 58 DGNPRLSCFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------- 129 (357)
Q Consensus 58 ~~~~kl~Dfg~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~------- 129 (357)
++.+||+|||+++.... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...........
T Consensus 198 ~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 277 (360)
T 3llt_A 198 STGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQP 277 (360)
T ss_dssp CCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCC
T ss_pred CCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCC
Confidence 78899999999986544 3456789999999999999999999999999999999999999865421110000
Q ss_pred ------------ccccccc-cccCCCCC--------------------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 130 ------------NFLMLMD-SCLEGHFS--------------------NDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 130 ------------~~~~~~~-~~~~~~~~--------------------~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....... ......++ ...++.+.+||.+||+.||.+|||+.++++|
T Consensus 278 ~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 278 IPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp CCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred CCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000 00000000 0112678899999999999999999999876
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=270.30 Aligned_cols=166 Identities=20% Similarity=0.301 Sum_probs=139.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+++.... ..
T Consensus 424 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~ 500 (674)
T 3pfq_A 424 VNGGDLMYHIQ--QVGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK 500 (674)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBC
T ss_pred cCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccccCCcccc
Confidence 57999999995 3467999999999999999999999999 99999999999999999999999999985322 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+..||+.|+|||++.+..++.++|+|||||++|||++|+.||.......+... +... ...++...++++.+||.
T Consensus 501 ~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~li~ 574 (674)
T 3pfq_A 501 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IMEH--NVAYPKSMSKEAVAICK 574 (674)
T ss_dssp CCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHSS--CCCCCTTSCHHHHHHHH
T ss_pred cccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHH----HHhC--CCCCCccCCHHHHHHHH
Confidence 56799999999999999999999999999999999999999876533222111 1111 12345667889999999
Q ss_pred HhccCCCCCCCCH-----HHHHHH
Q 018381 157 RCLQYEPRERPNA-----KSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~-----~~v~~~ 175 (357)
+||+.||.+||++ .+|++|
T Consensus 575 ~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 575 GLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HHccCCHHHCCCCCCCcHHHHhcC
Confidence 9999999999997 788775
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-33 Score=243.67 Aligned_cols=174 Identities=18% Similarity=0.269 Sum_probs=141.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++.. ....+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 85 MEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp CTTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 468999999953 4567999999999999999999999999 999999999999999999999999998865432
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.......... .+........+...+..+.++
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~l~~l 237 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-----DISTGFRLYKPRLASTHVYQI 237 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-----HHHTTCCCCCCTTSCHHHHHH
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHH-----HHhcCCcCCCCccCcHHHHHH
Confidence 23456788999999998889999999999999999999 787776542222111 011111222344567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
+.+||..||++|||+.+++++|+.+..
T Consensus 238 i~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 238 MNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999988754
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-33 Score=251.33 Aligned_cols=177 Identities=21% Similarity=0.290 Sum_probs=141.2
Q ss_pred CCCCchhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWEN--------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
++||+|.+++..... ..+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 114 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Df 192 (316)
T 2xir_A 114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDF 192 (316)
T ss_dssp CTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCC
T ss_pred CCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEECCC
Confidence 468999999964221 23899999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...+|+.|+|||++.+..++.++|||||||++|+|++ |..||........ +........
T Consensus 193 g~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~----~~~~~~~~~ 268 (316)
T 2xir_A 193 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----FCRRLKEGT 268 (316)
T ss_dssp GGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH----HHHHHHHTC
T ss_pred ccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH----HHHHhccCc
Confidence 9998654332 2356889999999998899999999999999999998 8888765321110 011111111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
....+..+++.+.++|.+||..||.+|||+.+++++|+.+...
T Consensus 269 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 269 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 2233455678899999999999999999999999999887543
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-32 Score=247.89 Aligned_cols=166 Identities=19% Similarity=0.241 Sum_probs=135.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 103 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 179 (327)
T 3a62_A 103 LSGGELFMQLE--REGIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179 (327)
T ss_dssp CTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC----------C
T ss_pred CCCCcHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCcccccccCCcccc
Confidence 47899999995 3567999999999999999999999999 99999999999999999999999999875432 23
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... ..... ...++...+..+.++|.
T Consensus 180 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~----~i~~~--~~~~p~~~~~~~~~li~ 253 (327)
T 3a62_A 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID----KILKC--KLNLPPYLTQEARDLLK 253 (327)
T ss_dssp TTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH----HHHHT--CCCCCTTSCHHHHHHHH
T ss_pred ccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHH----HHHhC--CCCCCCCCCHHHHHHHH
Confidence 4578999999999998889999999999999999999999987643222111 11111 11244556788999999
Q ss_pred HhccCCCCCCC-----CHHHHHHH
Q 018381 157 RCLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rp-----s~~~v~~~ 175 (357)
+||..||.+|| ++.++++|
T Consensus 254 ~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 254 KLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp HHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred HHHhcCHhhccCCCCCCHHHHHcC
Confidence 99999999999 78899887
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-33 Score=254.85 Aligned_cols=176 Identities=18% Similarity=0.258 Sum_probs=139.9
Q ss_pred CCCCchhhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCc
Q 018381 1 MPNETLSKHLFHW------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 68 (357)
Q Consensus 1 ~~~gsL~~~l~~~------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 68 (357)
+++|+|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 132 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 210 (333)
T 2i1m_A 132 CCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGL 210 (333)
T ss_dssp CTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGEEEBCCCGG
T ss_pred CCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCeEEECcccc
Confidence 4688999998532 1457899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCC
Q 018381 69 MKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEG 141 (357)
Q Consensus 69 ~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
++...... ...+|+.|+|||++.+..++.++|||||||++|+|++ |..||....... .+..........
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----~~~~~~~~~~~~ 286 (333)
T 2i1m_A 211 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS----KFYKLVKDGYQM 286 (333)
T ss_dssp GCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH----HHHHHHHHTCCC
T ss_pred ccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH----HHHHHHhcCCCC
Confidence 98543322 2346788999999998899999999999999999998 877776432111 111111122222
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 142 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 142 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
..+..+++.+.++|.+||+.||.+|||+.+++++|+.+..
T Consensus 287 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 287 AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 3345567889999999999999999999999999987644
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-33 Score=265.67 Aligned_cols=172 Identities=22% Similarity=0.323 Sum_probs=140.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
|+||+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++..... ..
T Consensus 266 ~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~ 344 (576)
T 2acx_A 266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344 (576)
T ss_dssp CCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEEC
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccCccccc
Confidence 57999999996544566999999999999999999999999 999999999999999999999999999876543 24
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
..||+.|+|||++.+..++.++|+|||||++|||++|..||......... ..+...+. .....++...++++.+||.+
T Consensus 345 ~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~-~~i~~~i~-~~~~~~p~~~s~~~~dLI~~ 422 (576)
T 2acx_A 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVK-EVPEEYSERFSPQARSLCSQ 422 (576)
T ss_dssp CCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH-HHHHHHHH-HCCCCCCTTSCHHHHHHHHH
T ss_pred cCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH-HHHHHHhh-cccccCCccCCHHHHHHHHH
Confidence 57999999999999888999999999999999999999998753210000 00001110 11223455677899999999
Q ss_pred hccCCCCCCC-----CHHHHHHH
Q 018381 158 CLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rp-----s~~~v~~~ 175 (357)
||..||.+|| ++.++++|
T Consensus 423 lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 423 LLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HTCSSGGGSTTCSSSHHHHHHTS
T ss_pred hccCCHHHcCCCCCCCHHHHHhC
Confidence 9999999999 78999887
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-32 Score=251.56 Aligned_cols=171 Identities=10% Similarity=0.065 Sum_probs=138.1
Q ss_pred CCCCchhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-----------CCCeEEecC
Q 018381 1 MPNETLSKHLFHW---ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-----------DGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-----------~~~~kl~Df 66 (357)
++||+|.+++... ....+++.+++.|+.||+.||.|||+.+ ||||||||+|||++. ++.+||+||
T Consensus 149 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DF 227 (365)
T 3e7e_A 149 YSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDL 227 (365)
T ss_dssp CCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CTTEEECCC
T ss_pred cCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccCCEEEeeC
Confidence 5799999999531 3567999999999999999999999999 999999999999998 899999999
Q ss_pred CcccccC---CC---CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccC
Q 018381 67 GLMKNSR---DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE 140 (357)
Q Consensus 67 g~~~~~~---~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (357)
|+++... .. ....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+.
T Consensus 228 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-------~~~~~~~ 300 (365)
T 3e7e_A 228 GQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-------KPEGLFR 300 (365)
T ss_dssp TTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-------EECSCCT
T ss_pred chhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-------eechhcc
Confidence 9996432 11 345689999999999998899999999999999999999988754321111 1111111
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCC-CCHHHHHHHhCccccc
Q 018381 141 GHFSNDDGTELVRLASRCLQYEPRER-PNAKSLVASLTPLQKE 182 (357)
Q Consensus 141 ~~~~~~~~~~~~~li~~cl~~~p~~R-ps~~~v~~~l~~~~~~ 182 (357)
. ...++.+.+++..||..+|.+| |++.++.+.|+.+...
T Consensus 301 ~---~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 301 R---LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp T---CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred c---cCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 1 1246778999999999999999 7888888887776543
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-33 Score=262.54 Aligned_cols=177 Identities=14% Similarity=0.149 Sum_probs=139.7
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee---CCCCCeEEecCCcccccCCCC---
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDGK--- 76 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~--- 76 (357)
+|+|.+++.. ..+.+++.+++.|+.||+.||.|||+++ ||||||||+|||| +.++.+||+|||+++......
T Consensus 86 g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (483)
T 3sv0_A 86 GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ 163 (483)
T ss_dssp CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccc
Confidence 8999999942 4678999999999999999999999999 9999999999999 578899999999998654322
Q ss_pred --------ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccC---CCCCh
Q 018381 77 --------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE---GHFSN 145 (357)
Q Consensus 77 --------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 145 (357)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+......... .....
T Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~ 242 (483)
T 3sv0_A 164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVATSIEALCR 242 (483)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH-HHHHHHHHHHHHSCHHHHHT
T ss_pred ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH-HHHHHHhhccccccHHHHhc
Confidence 457899999999999999999999999999999999999998753110000 000000000000 01112
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.++.++.+||.+||..+|++||++.+|++.|+.+...
T Consensus 243 ~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 243 GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999998877443
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-33 Score=251.84 Aligned_cols=171 Identities=19% Similarity=0.274 Sum_probs=118.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC---CeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~-- 75 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 88 LNGGELFERIK--KKKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp CCSCBHHHHHH--HCSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred cCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 57899999995 4578999999999999999999999999 99999999999997665 7999999999865433
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCC--CC----hhh
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH--FS----NDD 147 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~ 147 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||........ ............... ++ ..+
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKKIKKGDFSFEGEAWKNV 243 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCCCCCSHHHHTS
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHHHHcCCCCCCcccccCC
Confidence 345679999999999998999999999999999999999999865321110 000011111111111 11 245
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 148 GTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 148 ~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
++++.+||.+||..||.+|||+.++++|
T Consensus 244 s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 244 SQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 7889999999999999999999999876
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-32 Score=250.23 Aligned_cols=169 Identities=18% Similarity=0.201 Sum_probs=135.5
Q ss_pred CCCCchhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC---eEEecCCcccccCCC
Q 018381 1 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~~~~~~~~ 75 (357)
++||+|.+++... .+..+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++.....
T Consensus 108 ~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~ 186 (351)
T 3c0i_A 108 MDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES 186 (351)
T ss_dssp CSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTT
T ss_pred CCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcceeEecCC
Confidence 5789999888532 3456999999999999999999999999 999999999999986654 999999999866543
Q ss_pred ----CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCC--CCChhhHH
Q 018381 76 ----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--HFSNDDGT 149 (357)
Q Consensus 76 ----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 149 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||.......+... ....... .....+++
T Consensus 187 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i-----~~~~~~~~~~~~~~~s~ 261 (351)
T 3c0i_A 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGI-----IKGKYKMNPRQWSHISE 261 (351)
T ss_dssp SCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHH-----HHTCCCCCHHHHTTSCH
T ss_pred CeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHH-----HcCCCCCCccccccCCH
Confidence 245789999999999988899999999999999999999999876532222110 0000000 00123567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+.+||.+||+.||++|||+.++++|
T Consensus 262 ~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 262 SAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 89999999999999999999999986
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-32 Score=241.47 Aligned_cols=167 Identities=21% Similarity=0.297 Sum_probs=136.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--Ccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~ 78 (357)
+++|+|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++...... ...
T Consensus 91 ~~~~~l~~~l~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~ 167 (279)
T 3fdn_A 91 APLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 167 (279)
T ss_dssp CTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC--------
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCccccccc
Confidence 46889999995 3467999999999999999999999999 999999999999999999999999998654433 345
Q ss_pred ccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 79 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
.||+.|+|||++.+..++.++||||||+++|+|++|..||........... .. .....++...++.+.++|.+|
T Consensus 168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~li~~~ 241 (279)
T 3fdn_A 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR----IS--RVEFTFPDFVTEGARDLISRL 241 (279)
T ss_dssp CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HH--HTCCCCCTTSCHHHHHHHHHH
T ss_pred CCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHH----HH--hCCCCCCCcCCHHHHHHHHHH
Confidence 789999999999988899999999999999999999999875432221111 00 011234455678899999999
Q ss_pred ccCCCCCCCCHHHHHHHh
Q 018381 159 LQYEPRERPNAKSLVASL 176 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~l 176 (357)
|..||.+|||+.++++|-
T Consensus 242 l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 242 LKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp CCSSGGGSCCHHHHHHCH
T ss_pred hccChhhCCCHHHHhhCc
Confidence 999999999999999973
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-32 Score=262.64 Aligned_cols=172 Identities=17% Similarity=0.282 Sum_probs=137.9
Q ss_pred CCCCchhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---
Q 018381 1 MPNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 75 (357)
++||+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 57999999996432 457999999999999999999999999 999999999999999999999999999865433
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....||+.|+|||++.+..++.++|+|||||++|||++|+.||................... ...++...++.+.++
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~l 423 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFSPASKDF 423 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSCHHHHHH
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccCHHHHHH
Confidence 23579999999999999899999999999999999999999987532100000000111111 123456677899999
Q ss_pred HHHhccCCCCCCCCH-----HHHHHH
Q 018381 155 ASRCLQYEPRERPNA-----KSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~-----~~v~~~ 175 (357)
|.+||+.||.+||++ .+++.|
T Consensus 424 i~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 424 CEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp HHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred HHHhccCCHhHCCCCcccCHHHHHcC
Confidence 999999999999965 677765
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-32 Score=256.29 Aligned_cols=173 Identities=18% Similarity=0.226 Sum_probs=135.4
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC--eEEecCCcccccCCC-Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN--PRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~-~~~~ 79 (357)
+|+|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+++..... .+..
T Consensus 182 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~~ 260 (429)
T 3kvw_A 182 SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYI 260 (429)
T ss_dssp CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSC
T ss_pred CCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceecCCcccccC
Confidence 578999997555567999999999999999999999999 999999999999999887 999999999765543 4568
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC-----------------cccccccc-----
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------------NFLMLMDS----- 137 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-----------------~~~~~~~~----- 137 (357)
||+.|+|||++.+..++.++|||||||++|||++|..||........... .....+..
T Consensus 261 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 340 (429)
T 3kvw_A 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPR 340 (429)
T ss_dssp SCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBT
T ss_pred CCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcc
Confidence 89999999999998999999999999999999999988875421110000 00000000
Q ss_pred ----------------------ccC---------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 138 ----------------------CLE---------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 138 ----------------------~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
... ...+...++.+.+||.+||+.||++|||+.++++|-
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hp 410 (429)
T 3kvw_A 341 YCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHP 410 (429)
T ss_dssp TSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTST
T ss_pred cccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCCh
Confidence 000 001112357799999999999999999999999973
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-33 Score=248.75 Aligned_cols=170 Identities=18% Similarity=0.219 Sum_probs=129.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~g~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 174 (311)
T 3ork_A 98 VDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174 (311)
T ss_dssp CCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC-----------
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccc
Confidence 46899999995 3567999999999999999999999999 999999999999999999999999999755432
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||.................. ........++..+.+
T Consensus 175 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~ 252 (311)
T 3ork_A 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI--PPSARHEGLSADLDA 252 (311)
T ss_dssp -------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC--CHHHHSTTCCHHHHH
T ss_pred cccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC--CcccccCCCCHHHHH
Confidence 2346899999999999989999999999999999999999998765332221111111000 000112235678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+|.+||+.||.+||+..+++.+
T Consensus 253 li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 253 VVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp HHHHHTCSSGGGSCSSHHHHHH
T ss_pred HHHHHHhcCHhhChhhHHHHHH
Confidence 9999999999999977766654
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-33 Score=271.83 Aligned_cols=172 Identities=19% Similarity=0.238 Sum_probs=141.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
|+||+|.+++. ..+.+++.+++.|+.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++......
T Consensus 451 ~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 451 AELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp CTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred cCCCCHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 57999999995 4568999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...+|+.|+|||++.+..++.++|||||||++|||++ |+.||........ ...+........+..+++++.
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~-----~~~i~~~~~~~~p~~~~~~l~ 602 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-----TAMLEKGERMGCPAGCPREMY 602 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----HHHHHTTCCCCCCTTCCHHHH
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHH
Confidence 2245788999999999999999999999999999998 9988876432221 112222223345667888999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
+||.+||..||++|||+.+|++.|+.+.
T Consensus 603 ~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 603 DLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 9999999999999999999999988764
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-33 Score=251.22 Aligned_cols=172 Identities=20% Similarity=0.278 Sum_probs=135.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC----CCeEEecCCcccccCCC-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD----GNPRLSCFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~~~~~~~~- 75 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+.+ |+||||||+|||+..+ +.+||+|||+++.....
T Consensus 98 ~~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 98 MKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp CCSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 57899999995 4567999999999999999999999999 9999999999998533 34999999999865432
Q ss_pred ---CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccccc--ccccCCCCChhhHHH
Q 018381 76 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM--DSCLEGHFSNDDGTE 150 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 150 (357)
.+..||+.|+|||++.+..++.++|||||||++|+|++|..||.....+... ..+.... ...+.......+++.
T Consensus 175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~ 253 (342)
T 2qr7_A 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE-EILARIGSGKFSLSGGYWNSVSDT 253 (342)
T ss_dssp CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHH-HHHHHHHHCCCCCCSTTTTTSCHH
T ss_pred CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHH-HHHHHHccCCcccCccccccCCHH
Confidence 3457899999999998877899999999999999999999998642110000 0000000 111122233456788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
+.+||.+||..||++|||+.++++|-
T Consensus 254 ~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 254 AKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 99999999999999999999999873
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-32 Score=249.93 Aligned_cols=179 Identities=14% Similarity=0.167 Sum_probs=137.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCceeecCCCCCeeeCCCCCeEEecCCccccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS--------SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH--------~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 72 (357)
+++|+|.+++. ...+++.+++.++.||+.||.||| +.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 122 ~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~ 197 (342)
T 1b6c_B 122 HEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRH 197 (342)
T ss_dssp CTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCcHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEECCCceec
Confidence 46899999994 457999999999999999999999 788 999999999999999999999999998754
Q ss_pred CCC--------CccccCCCCCCccccccCC------CCccccccchHHHHHHHHhC----------CCCCCcch-----h
Q 018381 73 RDG--------KSYSTNLAFTPPEYLRTGR------VIPESVVYSFGTLLLDLLSG----------KHIPPSHA-----L 123 (357)
Q Consensus 73 ~~~--------~~~~gt~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~~g----------~~~~~~~~-----~ 123 (357)
... ....||+.|+|||++.+.. ++.++|||||||++|+|++| ..||.... .
T Consensus 198 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~ 277 (342)
T 1b6c_B 198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 277 (342)
T ss_dssp ETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccH
Confidence 432 2346899999999998652 33689999999999999999 55654321 0
Q ss_pred HhhhcCccccccccccCCC-CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 124 DLIRGKNFLMLMDSCLEGH-FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
..+..........+.+... ....++..+.++|.+||..||++|||+.+++++|+.+....
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 278 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 1111000011111111111 12356788999999999999999999999999999887653
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-32 Score=246.83 Aligned_cols=170 Identities=17% Similarity=0.187 Sum_probs=137.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC----CeEEecCCcccccCCC-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~~~~~~~~- 75 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++ .+||+|||+++.....
T Consensus 97 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~ 173 (321)
T 2a2a_A 97 VSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV 173 (321)
T ss_dssp CCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccceecCccc
Confidence 46899999995 4568999999999999999999999999 99999999999999888 7999999999865543
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||............ .. .............++.+.+
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i-~~-~~~~~~~~~~~~~~~~~~~ 251 (321)
T 2a2a_A 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TS-VSYDFDEEFFSHTSELAKD 251 (321)
T ss_dssp CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH-HT-TCCCCCHHHHTTCCHHHHH
T ss_pred cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-Hh-cccccChhhhcccCHHHHH
Confidence 3456899999999999889999999999999999999999998764322211110 00 0000111111245678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+|.+||..||++|||+.++++|
T Consensus 252 li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 252 FIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHTTSCSSTTTSCCHHHHHHS
T ss_pred HHHHHcCCChhhCcCHHHHhcC
Confidence 9999999999999999999987
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-33 Score=256.50 Aligned_cols=168 Identities=20% Similarity=0.290 Sum_probs=130.3
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC--------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-------- 74 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-------- 74 (357)
+|+|.+++. .+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~~~L~~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 169 (388)
T 3oz6_A 94 ETDLHAVIR---ANILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNI 169 (388)
T ss_dssp SEEHHHHHH---HTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCG
T ss_pred CcCHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccc
Confidence 368888883 468999999999999999999999999 99999999999999999999999999975432
Q ss_pred -----------------CCccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccccc-
Q 018381 75 -----------------GKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM- 135 (357)
Q Consensus 75 -----------------~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~- 135 (357)
.....||++|+|||++.+ ..++.++|||||||++|||++|+.||.+......-.. +....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~-i~~~~~ 248 (388)
T 3oz6_A 170 PLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER-IIGVID 248 (388)
T ss_dssp GGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHHHC
T ss_pred cccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHhcC
Confidence 123478999999999986 6789999999999999999999999876421110000 00000
Q ss_pred -----------------------------ccccCC------------CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 018381 136 -----------------------------DSCLEG------------HFSNDDGTELVRLASRCLQYEPRERPNAKSLVA 174 (357)
Q Consensus 136 -----------------------------~~~~~~------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~ 174 (357)
...... .....+++++.+||.+||+.||++|||+.++++
T Consensus 249 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~ 328 (388)
T 3oz6_A 249 FPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALK 328 (388)
T ss_dssp CCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhC
Confidence 000000 001134678999999999999999999999999
Q ss_pred H
Q 018381 175 S 175 (357)
Q Consensus 175 ~ 175 (357)
|
T Consensus 329 H 329 (388)
T 3oz6_A 329 H 329 (388)
T ss_dssp S
T ss_pred C
Confidence 8
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-32 Score=246.04 Aligned_cols=159 Identities=21% Similarity=0.241 Sum_probs=133.9
Q ss_pred CC-chhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC---cc
Q 018381 3 NE-TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---SY 78 (357)
Q Consensus 3 ~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~ 78 (357)
+| +|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 113 ~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~ 189 (335)
T 3dls_A 113 SGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTF 189 (335)
T ss_dssp TSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEE
T ss_pred CCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEcCCCcEEEeecccceECCCCCceecc
Confidence 45 9999995 4567999999999999999999999999 9999999999999999999999999998665433 45
Q ss_pred ccCCCCCCccccccCCC-CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 79 STNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
.||+.|+|||++.+..+ +.++|||||||++|+|++|..||..... ...... ..+..+++.+.++|.+
T Consensus 190 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----------~~~~~~--~~~~~~~~~l~~li~~ 257 (335)
T 3dls_A 190 CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----------TVEAAI--HPPYLVSKELMSLVSG 257 (335)
T ss_dssp CSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----------GTTTCC--CCSSCCCHHHHHHHHH
T ss_pred CCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----------HHhhcc--CCCcccCHHHHHHHHH
Confidence 68999999999988776 7899999999999999999998764211 111111 1233456789999999
Q ss_pred hccCCCCCCCCHHHHHHHh
Q 018381 158 CLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 158 cl~~~p~~Rps~~~v~~~l 176 (357)
||..||++|||+.+++++-
T Consensus 258 ~L~~dP~~Rps~~ell~hp 276 (335)
T 3dls_A 258 LLQPVPERRTTLEKLVTDP 276 (335)
T ss_dssp HTCSSGGGSCCHHHHHHCT
T ss_pred HccCChhhCcCHHHHhcCc
Confidence 9999999999999999983
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-32 Score=256.41 Aligned_cols=171 Identities=19% Similarity=0.175 Sum_probs=134.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++.+ .+..+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 143 ~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~ 220 (412)
T 2vd5_A 143 YVGGDLLTLLSK-FGERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRS 220 (412)
T ss_dssp CCSCBHHHHHHH-HSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheeccCCCcccc
Confidence 579999999953 3458999999999999999999999999 999999999999999999999999999865443
Q ss_pred CccccCCCCCCccccc-------cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhH
Q 018381 76 KSYSTNLAFTPPEYLR-------TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 148 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (357)
....||+.|+|||++. +..++.++|+|||||++|||++|+.||.............. ..........+..++
T Consensus 221 ~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~-~~~~~~~p~~~~~~s 299 (412)
T 2vd5_A 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH-YKEHLSLPLVDEGVP 299 (412)
T ss_dssp SSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT-HHHHCCCC----CCC
T ss_pred ceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHh-cccCcCCCccccCCC
Confidence 2357999999999997 35688999999999999999999999876533222111110 000000111234567
Q ss_pred HHHHHHHHHhccCCCCCC---CCHHHHHHH
Q 018381 149 TELVRLASRCLQYEPRER---PNAKSLVAS 175 (357)
Q Consensus 149 ~~~~~li~~cl~~~p~~R---ps~~~v~~~ 175 (357)
+++.+||.+||. +|.+| |++.++++|
T Consensus 300 ~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 300 EEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred HHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 889999999999 99998 599999987
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-32 Score=252.29 Aligned_cols=171 Identities=18% Similarity=0.092 Sum_probs=136.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee--CCCCCeEEecCCcccccCCC---
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF--DQDGNPRLSCFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill--~~~~~~kl~Dfg~~~~~~~~--- 75 (357)
++||+|.+++.. ....+++.+++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 168 ~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~ 245 (373)
T 2x4f_A 168 VDGGELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245 (373)
T ss_dssp CTTCEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc
Confidence 578999999853 4567999999999999999999999999 9999999999999 56788999999999866543
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||................ ..+........++.+.+||
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~li 323 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACR--WDLEDEEFQDISEEAKEFI 323 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC--CCSCSGGGTTSCHHHHHHH
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc--CCCChhhhccCCHHHHHHH
Confidence 24468999999999998889999999999999999999999987643221111100000 0011111234567899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 018381 156 SRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+||..||.+|||+.++++|
T Consensus 324 ~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 324 SKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp HTTSCSSGGGSCCHHHHHHS
T ss_pred HHHcCCChhhCCCHHHHhcC
Confidence 99999999999999999986
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-33 Score=249.17 Aligned_cols=175 Identities=18% Similarity=0.239 Sum_probs=140.2
Q ss_pred CCCCchhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCccccc
Q 018381 1 MPNETLSKHLFHWE--------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 72 (357)
+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 110 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg~~~~~ 188 (322)
T 1p4o_A 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188 (322)
T ss_dssp CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred CCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCcccccc
Confidence 46899999995311 256899999999999999999999999 999999999999999999999999998754
Q ss_pred CCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCCh
Q 018381 73 RDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 145 (357)
Q Consensus 73 ~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
... ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||........... +........+.
T Consensus 189 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~ 263 (322)
T 1p4o_A 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF-----VMEGGLLDKPD 263 (322)
T ss_dssp GGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHH-----HHTTCCCCCCT
T ss_pred ccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHH-----HHcCCcCCCCC
Confidence 332 22346788999999998899999999999999999999 7777655322211111 00111122345
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
.++..+.++|.+||..||.+|||+.+++++|+.+..
T Consensus 264 ~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 264 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 677889999999999999999999999999988654
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-32 Score=240.47 Aligned_cols=167 Identities=18% Similarity=0.207 Sum_probs=117.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++.. ....+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 93 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 170 (278)
T 3cok_A 93 CHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY 170 (278)
T ss_dssp CTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEECC-------
T ss_pred CCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcce
Confidence 468899999953 4578999999999999999999999999 999999999999999999999999998865422 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++||||||+++|+|++|+.||......... ...... ....+...+.++.++|.
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~li~ 244 (278)
T 3cok_A 171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL----NKVVLA--DYEMPSFLSIEAKDLIH 244 (278)
T ss_dssp ---------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCSS--CCCCCTTSCHHHHHHHH
T ss_pred eccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH----HHHhhc--ccCCccccCHHHHHHHH
Confidence 456899999999999888899999999999999999999987653211111 111111 11234456788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..||++|||+.+++++
T Consensus 245 ~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 245 QLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp HHSCSSGGGSCCHHHHTTS
T ss_pred HHcccCHhhCCCHHHHhcC
Confidence 9999999999999999986
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-33 Score=244.92 Aligned_cols=165 Identities=15% Similarity=0.177 Sum_probs=134.6
Q ss_pred CCCCchhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC-------------------C
Q 018381 1 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-------------------G 59 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~-------------------~ 59 (357)
++||+|.+++... ....+++.+++.++.||+.||.|||+++ |+||||||+||+++.+ .
T Consensus 93 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 93 CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp CTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC--------------------CC
T ss_pred cCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 4789999999532 1267999999999999999999999999 9999999999999844 4
Q ss_pred CeEEecCCcccccCCCCccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchh-HhhhcCcccccccc
Q 018381 60 NPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHAL-DLIRGKNFLMLMDS 137 (357)
Q Consensus 60 ~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-~~~~~~~~~~~~~~ 137 (357)
.+||+|||++..........||+.|+|||++.+. .++.++|||||||++|+|++|..++..... ......
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~-------- 243 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQG-------- 243 (289)
T ss_dssp CEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHTT--------
T ss_pred EEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHcC--------
Confidence 7999999999988777777899999999999865 556799999999999999999866543311 111111
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.....+..+++.+.++|.+||..||++|||+.++++|
T Consensus 244 -~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 244 -RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp -CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1123345567889999999999999999999999987
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-32 Score=243.49 Aligned_cols=170 Identities=18% Similarity=0.190 Sum_probs=130.6
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CCccc
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYS 79 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~ 79 (357)
|+|.+++.. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....
T Consensus 85 ~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 162 (292)
T 3o0g_A 85 QDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV 162 (292)
T ss_dssp EEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCC
T ss_pred CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCc
Confidence 566666632 4678999999999999999999999999 99999999999999999999999999986542 23457
Q ss_pred cCCCCCCccccccCC-CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcc---------------ccccc-------
Q 018381 80 TNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF---------------LMLMD------- 136 (357)
Q Consensus 80 gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~---------------~~~~~------- 136 (357)
||+.|+|||++.+.. ++.++|||||||++|+|++|..|+............+ ....+
T Consensus 163 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (292)
T 3o0g_A 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY 242 (292)
T ss_dssp SCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCC
T ss_pred cccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccc
Confidence 899999999998765 7999999999999999999988864331110000000 00000
Q ss_pred --cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 137 --SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 137 --~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...........++.+.+||.+||+.||++|||+.++++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000011223467889999999999999999999999987
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-32 Score=243.78 Aligned_cols=171 Identities=19% Similarity=0.237 Sum_probs=131.4
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
.|+|.+++.. ....+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 102 ~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 179 (311)
T 3niz_A 102 EKDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179 (311)
T ss_dssp SEEHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CC
T ss_pred CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCC
Confidence 3578888843 5567999999999999999999999999 999999999999999999999999999865422 344
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc-----------ccc-------------
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------FLM------------- 133 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~-----------~~~------------- 133 (357)
.||+.|+|||++.+ ..++.++|||||||++|+|++|+.||............ +..
T Consensus 180 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (311)
T 3niz_A 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQ 259 (311)
T ss_dssp CCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCC
T ss_pred cccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccc
Confidence 68999999999876 55799999999999999999999988654211100000 000
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 134 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...........+..++++.+||.+||+.||++|||+.++++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 260 VFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp CCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000000112345789999999999999999999999986
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-32 Score=245.89 Aligned_cols=178 Identities=19% Similarity=0.268 Sum_probs=139.6
Q ss_pred CCCCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---
Q 018381 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 75 (357)
+++|+|.+++.. ..+..+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~ 190 (317)
T 2buj_A 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190 (317)
T ss_dssp CTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESCEEEES
T ss_pred CCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhccccccc
Confidence 468899999953 24578999999999999999999999999 999999999999999999999999998754321
Q ss_pred ----------CccccCCCCCCccccccCC---CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCC
Q 018381 76 ----------KSYSTNLAFTPPEYLRTGR---VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 142 (357)
Q Consensus 76 ----------~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||..... ...............+
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~ 267 (317)
T 2buj_A 191 SRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ---KGDSVALAVQNQLSIP 267 (317)
T ss_dssp HHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH---TTSCHHHHHHCC--CC
T ss_pred ccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc---ccchhhHHhhccCCCC
Confidence 1234689999999997644 68899999999999999999988753211 0111111111112222
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+...+..+.++|.+||..||.+|||+.+++++|+.+...
T Consensus 268 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 268 QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 3345678899999999999999999999999999887644
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-32 Score=252.12 Aligned_cols=172 Identities=20% Similarity=0.255 Sum_probs=135.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ....+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 141 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 217 (355)
T 1vzo_A 141 INGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA 217 (355)
T ss_dssp CCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGG
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcc
Confidence 57899999995 3467999999999999999999999999 999999999999999999999999999754322
Q ss_pred CccccCCCCCCccccccC--CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
....||+.|+|||++.++ .++.++|||||||++|+|++|+.||................. .....++...+..+.+
T Consensus 218 ~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 295 (355)
T 1vzo_A 218 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPPYPQEMSALAKD 295 (355)
T ss_dssp CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH--HCCCCCCTTSCHHHHH
T ss_pred cCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh--ccCCCCCcccCHHHHH
Confidence 235789999999999863 468899999999999999999998864311100000000000 0112345567788999
Q ss_pred HHHHhccCCCCCCC-----CHHHHHHHhC
Q 018381 154 LASRCLQYEPRERP-----NAKSLVASLT 177 (357)
Q Consensus 154 li~~cl~~~p~~Rp-----s~~~v~~~l~ 177 (357)
||.+||..||++|| ++.+++++..
T Consensus 296 li~~~L~~dP~~R~~~~~~s~~ell~h~~ 324 (355)
T 1vzo_A 296 LIQRLLMKDPKKRLGCGPRDADEIKEHLF 324 (355)
T ss_dssp HHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred HHHHHhhhCHHHhcCCCCCCHHHHHcCcc
Confidence 99999999999999 9999998754
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-32 Score=240.19 Aligned_cols=170 Identities=16% Similarity=0.198 Sum_probs=136.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC---eEEecCCcccccCCCC-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~~~~~~~~~- 76 (357)
++||+|.+++. ....+++.++..++.|++.||.|||+.+ |+||||||+||+++.++. +||+|||++.......
T Consensus 87 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (284)
T 3kk8_A 87 VTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163 (284)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc
Confidence 47899999885 4567999999999999999999999999 999999999999986655 9999999997655433
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...||+.|+|||++.+..++.++||||||+++|+|++|..||................. ..........++.+.++
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l 241 (284)
T 3kk8_A 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY--DYPSPEWDTVTPEAKSL 241 (284)
T ss_dssp CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTTTTTSCHHHHHH
T ss_pred ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccc--cCCchhhcccCHHHHHH
Confidence 35789999999999998899999999999999999999999876533222111100100 11111223466789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
|.+||+.||++|||+.+++++
T Consensus 242 i~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 242 IDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp HHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHcccChhhCCCHHHHhcC
Confidence 999999999999999999986
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-32 Score=244.93 Aligned_cols=176 Identities=20% Similarity=0.258 Sum_probs=133.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
++||+|.+++.. .+..+++.+++.++.||+.||.|||+.+ ++||||||+||+++ ++.+||+|||+++....
T Consensus 111 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~ 187 (319)
T 2y4i_B 111 CKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR 187 (319)
T ss_dssp CCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC----------
T ss_pred ccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCcccccccccccc
Confidence 468999999943 4557999999999999999999999999 99999999999998 78999999999764421
Q ss_pred ---CCccccCCCCCCcccccc---------CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCC
Q 018381 75 ---GKSYSTNLAFTPPEYLRT---------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 142 (357)
Q Consensus 75 ---~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||............ ........
T Consensus 188 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~ 263 (319)
T 2y4i_B 188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM----GTGMKPNL 263 (319)
T ss_dssp CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHH----HTTCCCCC
T ss_pred ccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh----ccCCCCCC
Confidence 123358899999999874 34688999999999999999999998754332221110 00011111
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccccc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
.+..++..+.++|.+||..||++|||+.++++.|+.+....
T Consensus 264 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 264 SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 12245567999999999999999999999999999987664
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-32 Score=254.96 Aligned_cols=171 Identities=18% Similarity=0.254 Sum_probs=126.4
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC------
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------ 75 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------ 75 (357)
.+|+|.+++. ....+++..+..++.||+.||.|||+.+ ||||||||+||||+.++.+||+|||+++.....
T Consensus 139 ~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 215 (458)
T 3rp9_A 139 ADSDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQ 215 (458)
T ss_dssp CSEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCC
T ss_pred cccchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhccCccccccc
Confidence 3678999884 4578999999999999999999999999 999999999999999999999999999865321
Q ss_pred -------------------------CccccCCCCCCcccc-ccCCCCccccccchHHHHHHHHh-----------CCCCC
Q 018381 76 -------------------------KSYSTNLAFTPPEYL-RTGRVIPESVVYSFGTLLLDLLS-----------GKHIP 118 (357)
Q Consensus 76 -------------------------~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~~-----------g~~~~ 118 (357)
...+||++|+|||++ .+..++.++|||||||++|||++ |+.+|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f 295 (458)
T 3rp9_A 216 LPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLF 295 (458)
T ss_dssp CC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSC
T ss_pred cccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccC
Confidence 234679999999986 45678999999999999999999 45444
Q ss_pred Ccchh---------------------Hhhh------cC---------------ccccccccccC---CCCChhhHHHHHH
Q 018381 119 PSHAL---------------------DLIR------GK---------------NFLMLMDSCLE---GHFSNDDGTELVR 153 (357)
Q Consensus 119 ~~~~~---------------------~~~~------~~---------------~~~~~~~~~~~---~~~~~~~~~~~~~ 153 (357)
++... +.+. +. .+......... ....+..++++.+
T Consensus 296 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d 375 (458)
T 3rp9_A 296 PGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIH 375 (458)
T ss_dssp C--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHH
T ss_pred CCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHH
Confidence 43210 0000 00 00000000000 0011234678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
||.+||+.||++|||+.++++|
T Consensus 376 Ll~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 376 LLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp HHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHhccCccccCCHHHHhcC
Confidence 9999999999999999999997
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.5e-33 Score=249.85 Aligned_cols=180 Identities=18% Similarity=0.321 Sum_probs=143.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 126 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~ 203 (326)
T 2w1i_A 126 LPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYK 203 (326)
T ss_dssp CTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEE
T ss_pred CCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhccccccccc
Confidence 468999999953 4567999999999999999999999999 9999999999999999999999999998654432
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhh---cC--------ccccccccccCCC
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR---GK--------NFLMLMDSCLEGH 142 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~---~~--------~~~~~~~~~~~~~ 142 (357)
...++..|+|||++.+..++.++||||||+++|+|++|..|+......... .. .+...+.......
T Consensus 204 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (326)
T 2w1i_A 204 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 283 (326)
T ss_dssp CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCC
T ss_pred cccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCC
Confidence 234677899999999888899999999999999999999876533111110 00 0111111222233
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+..+++.+.++|.+||..||++|||+.++++.|+.+...
T Consensus 284 ~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 284 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 4566788999999999999999999999999999887653
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-32 Score=241.48 Aligned_cols=171 Identities=19% Similarity=0.273 Sum_probs=130.5
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CCcc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~ 78 (357)
.|+|.+++. ...+.+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.... ....
T Consensus 83 ~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (288)
T 1ob3_A 83 DQDLKKLLD-VCEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160 (288)
T ss_dssp SEEHHHHHH-TSTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred CCCHHHHHH-hcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCccccccccc
Confidence 358888884 34578999999999999999999999999 99999999999999999999999999875442 2344
Q ss_pred ccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc-----------c---ccc--ccccc--
Q 018381 79 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------F---LML--MDSCL-- 139 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~-----------~---~~~--~~~~~-- 139 (357)
.||+.|+|||++.+. .++.++|||||||++|+|++|+.||............ + ... .++.+
T Consensus 161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T 1ob3_A 161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240 (288)
T ss_dssp -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred cccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccccc
Confidence 689999999999764 5799999999999999999999988754221110000 0 000 00000
Q ss_pred -----CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 140 -----EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 140 -----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...+....++.+.++|.+||+.||++|||+.++++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 001123467889999999999999999999999987
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-33 Score=246.35 Aligned_cols=176 Identities=20% Similarity=0.245 Sum_probs=140.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 102 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 179 (291)
T 1u46_A 102 APLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179 (291)
T ss_dssp CTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEE
T ss_pred ccCCCHHHHHHh-ccCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEccccccccccccccchh
Confidence 468999999953 3467999999999999999999999999 9999999999999999999999999988654432
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..||.......... ...........+..++..+.
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~ 255 (291)
T 1u46_A 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH----KIDKEGERLPRPEDCPQDIY 255 (291)
T ss_dssp C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH----HHHTSCCCCCCCTTCCHHHH
T ss_pred hhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH----HHHccCCCCCCCcCcCHHHH
Confidence 2346778999999988888999999999999999999 888876543222111 11111112223456778899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
++|.+||..||.+|||+.+++++|+.+...
T Consensus 256 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 256 NVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred HHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 999999999999999999999999877643
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-32 Score=243.99 Aligned_cols=172 Identities=15% Similarity=0.174 Sum_probs=136.6
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-------------------CCCeEE
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-------------------DGNPRL 63 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-------------------~~~~kl 63 (357)
+|+|.+++......++++.+++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||
T Consensus 100 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl 178 (339)
T 1z57_A 100 GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKV 178 (339)
T ss_dssp CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEE
T ss_pred CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCccccccccccCCCceE
Confidence 789999997555568999999999999999999999999 999999999999987 668999
Q ss_pred ecCCcccccCCC-CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC-------ccc---
Q 018381 64 SCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-------NFL--- 132 (357)
Q Consensus 64 ~Dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-------~~~--- 132 (357)
+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|..||........... ...
T Consensus 179 ~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~ 258 (339)
T 1z57_A 179 VDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMI 258 (339)
T ss_dssp CCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHH
T ss_pred eeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 999999865543 456789999999999988999999999999999999999999875422110000 000
Q ss_pred ------cc---------------------ccc-ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 133 ------ML---------------------MDS-CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 133 ------~~---------------------~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.. ... ......+...++.+.++|.+||..||.+|||+.++++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 259 QKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 00 000 00011233567889999999999999999999999976
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-32 Score=244.78 Aligned_cols=183 Identities=16% Similarity=0.185 Sum_probs=135.6
Q ss_pred CCCCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---
Q 018381 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 75 (357)
+++|+|.+++.. ..+..+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 114 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 192 (310)
T 2wqm_A 114 ADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 192 (310)
T ss_dssp CCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC------------
T ss_pred CCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCcc
Confidence 468899999853 24577999999999999999999999999 999999999999999999999999998765432
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||........... ................++.+.++
T Consensus 193 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l 270 (310)
T 2wqm_A 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPSDHYSEELRQL 270 (310)
T ss_dssp ------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH--HHHHTTCSCCCCTTTSCHHHHHH
T ss_pred ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH--HHhhcccCCCCcccccCHHHHHH
Confidence 234689999999999988899999999999999999999998865321111000 00001111111224567789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCccccccCCC
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 186 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~~ 186 (357)
|.+||..||++|||+.++++.|+.+......+
T Consensus 271 i~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 271 VNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999998775554
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-32 Score=240.16 Aligned_cols=166 Identities=19% Similarity=0.290 Sum_probs=137.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--Ccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~ 78 (357)
+++|+|.+++. ..+.+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ...
T Consensus 96 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 172 (284)
T 2vgo_A 96 APRGELYKELQ--KHGRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTM 172 (284)
T ss_dssp CTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCcccccccc
Confidence 46889999995 3457999999999999999999999999 999999999999999999999999998755432 345
Q ss_pred ccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 79 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
.||+.|+|||++.+..++.++||||||+++|+|++|..||........... ... ....++...+..+.++|.+|
T Consensus 173 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~li~~~ 246 (284)
T 2vgo_A 173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR----IVN--VDLKFPPFLSDGSKDLISKL 246 (284)
T ss_dssp CSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHT--TCCCCCTTSCHHHHHHHHHH
T ss_pred cCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHH----Hhc--cccCCCCcCCHHHHHHHHHH
Confidence 789999999999988899999999999999999999998875432221111 111 11124455678899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 018381 159 LQYEPRERPNAKSLVAS 175 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~ 175 (357)
|..||.+|||+.++++|
T Consensus 247 l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 247 LRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp SCSSGGGSCCHHHHHTC
T ss_pred hhcCHhhCCCHHHHhhC
Confidence 99999999999999986
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-33 Score=257.01 Aligned_cols=161 Identities=14% Similarity=0.124 Sum_probs=128.1
Q ss_pred CCchhhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-C
Q 018381 3 NETLSKHLFHW-----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-K 76 (357)
Q Consensus 3 ~gsL~~~l~~~-----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~ 76 (357)
+|+|.+++... ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 183 ~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~ 261 (377)
T 3byv_A 183 QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVV 261 (377)
T ss_dssp SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCGGGCEETTCEEE
T ss_pred CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEechhheecCCccc
Confidence 68999999531 1123446889999999999999999999 999999999999999999999999999865443 3
Q ss_pred ccccCCCCCCccccccC-----------CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCCh
Q 018381 77 SYSTNLAFTPPEYLRTG-----------RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 145 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
...| +.|+|||++.+. .++.++|||||||++|||++|+.||...... ...... .. ...
T Consensus 262 ~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~----~~~~~~----~~--~~~ 330 (377)
T 3byv_A 262 SSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAAL----GGSEWI----FR--SCK 330 (377)
T ss_dssp CCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC----------CCSGGG----GS--SCC
T ss_pred CCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccc----cchhhh----hh--hcc
Confidence 4467 999999999887 7899999999999999999999987643211 111111 11 123
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+++.+.++|.+||..||++|||+.+++++
T Consensus 331 ~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 331 NIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp CCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred CCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 456789999999999999999999999975
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-32 Score=246.56 Aligned_cols=167 Identities=17% Similarity=0.265 Sum_probs=130.7
Q ss_pred CCCCchhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----
Q 018381 1 MPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---- 75 (357)
++||+|.+++.... ....++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 143 ~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~ 221 (332)
T 3qd2_B 143 CRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221 (332)
T ss_dssp CCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC----
T ss_pred cCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhc
Confidence 47899999996432 234677889999999999999999999 999999999999999999999999999865433
Q ss_pred ------------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCC
Q 018381 76 ------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 143 (357)
Q Consensus 76 ------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..|+.... .... . .........
T Consensus 222 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-~~~~-----~-~~~~~~~~~ 294 (332)
T 3qd2_B 222 TVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-RIIT-----D-VRNLKFPLL 294 (332)
T ss_dssp ----------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-HHHH-----H-HHTTCCCHH
T ss_pred cccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-HHHH-----H-hhccCCCcc
Confidence 23468999999999999899999999999999999999976532211 0000 0 000000011
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....++.+.++|.+||+.||++|||+.+++++
T Consensus 295 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 295 FTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred cccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 23445678999999999999999999999986
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-32 Score=246.78 Aligned_cols=175 Identities=17% Similarity=0.185 Sum_probs=125.0
Q ss_pred CCchhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 3 NETLSKHLFH-WENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 3 ~gsL~~~l~~-~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+|+|.+++.. ...+.+++.+++.++.||+.||.|||+.+ +|+||||||+|||++.++.+||+|||+++......
T Consensus 117 ~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 196 (337)
T 3ll6_A 117 KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSW 196 (337)
T ss_dssp SEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC----
T ss_pred CCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccc
Confidence 5889888853 23567999999999999999999999985 49999999999999999999999999998654321
Q ss_pred ------------ccccCCCCCCcccc---ccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCC
Q 018381 77 ------------SYSTNLAFTPPEYL---RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 141 (357)
Q Consensus 77 ------------~~~gt~~y~aPE~~---~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
...||+.|+|||++ .+..++.++|||||||++|+|++|+.||....... ........
T Consensus 197 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--------~~~~~~~~ 268 (337)
T 3ll6_A 197 SAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR--------IVNGKYSI 268 (337)
T ss_dssp ---------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------------CCC
T ss_pred cccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH--------hhcCcccC
Confidence 33589999999998 55678899999999999999999999876432211 11111111
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccccCC
Q 018381 142 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 185 (357)
Q Consensus 142 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~ 185 (357)
......+..+.+||.+||+.||.+|||+.+++++|+.+......
T Consensus 269 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 269 PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 22333456689999999999999999999999999988765433
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-32 Score=242.86 Aligned_cols=176 Identities=17% Similarity=0.213 Sum_probs=133.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 116 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 192 (309)
T 2h34_A 116 INGVDLAAMLR--RQGPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQL 192 (309)
T ss_dssp CCCEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC------------
T ss_pred cCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCccccccccccc
Confidence 46889999995 3467999999999999999999999999 999999999999999999999999998755432
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||.......+.... ..... .....+..+++.+.++|
T Consensus 193 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~l~~li 269 (309)
T 2h34_A 193 GNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHI-NQAIP--RPSTVRPGIPVAFDAVI 269 (309)
T ss_dssp ----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHH-HSCCC--CGGGTSTTCCTHHHHHH
T ss_pred cccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHh-ccCCC--CccccCCCCCHHHHHHH
Confidence 2446899999999999888999999999999999999999998765433221110 11010 11123445677899999
Q ss_pred HHhccCCCCCCC-CHHHHHHHhCccccc
Q 018381 156 SRCLQYEPRERP-NAKSLVASLTPLQKE 182 (357)
Q Consensus 156 ~~cl~~~p~~Rp-s~~~v~~~l~~~~~~ 182 (357)
.+||..||++|| ++.++++.|+.....
T Consensus 270 ~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 270 ARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp HHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred HHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 999999999999 999999998876554
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-32 Score=243.20 Aligned_cols=168 Identities=18% Similarity=0.299 Sum_probs=138.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++ ..+.+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 102 ~~~~~L~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 177 (303)
T 3a7i_A 102 LGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 177 (303)
T ss_dssp CTTEEHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBC
T ss_pred CCCCcHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCccccccC
Confidence 4688999999 4578999999999999999999999999 999999999999999999999999998765432 3
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++||||||+++|+|++|..||......... ..+........+...+..+.++|.
T Consensus 178 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~ 252 (303)
T 3a7i_A 178 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL-----FLIPKNNPPTLEGNYSKPLKEFVE 252 (303)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HHHHHSCCCCCCSSCCHHHHHHHH
T ss_pred ccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH-----HHhhcCCCCCCccccCHHHHHHHH
Confidence 456899999999999888999999999999999999999887653221111 011111112234456678999999
Q ss_pred HhccCCCCCCCCHHHHHHHhC
Q 018381 157 RCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+||..||.+|||+.+++++..
T Consensus 253 ~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 253 ACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp HHCCSSGGGSCCHHHHTTCHH
T ss_pred HHcCCChhhCcCHHHHhhChh
Confidence 999999999999999998743
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=250.45 Aligned_cols=168 Identities=17% Similarity=0.195 Sum_probs=128.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC---CeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~-- 75 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 221 ~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~ 297 (419)
T 3i6u_A 221 MEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 297 (419)
T ss_dssp CTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC----
T ss_pred CCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeecccceecCCCcc
Confidence 57999999995 5678999999999999999999999999 99999999999997544 5999999999876543
Q ss_pred -CccccCCCCCCcccccc---CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccC---CCCChhhH
Q 018381 76 -KSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE---GHFSNDDG 148 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 148 (357)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||...... ......+..... ......++
T Consensus 298 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~ 373 (419)
T 3i6u_A 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKDQITSGKYNFIPEVWAEVS 373 (419)
T ss_dssp -------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS----CCHHHHHHTTCCCCCHHHHTTSC
T ss_pred ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch----HHHHHHHhcCCCCCCchhhcccC
Confidence 34578999999999864 56788999999999999999999988643110 000011100000 00112356
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 149 TELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 149 ~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.+.++|.+||+.||++|||+.++++|
T Consensus 374 ~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 374 EKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 789999999999999999999999997
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-32 Score=248.02 Aligned_cols=168 Identities=15% Similarity=0.250 Sum_probs=134.3
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-CccccC
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt 81 (357)
+++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....+|
T Consensus 113 ~~~L~~~~~---~~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t 188 (367)
T 1cm8_A 113 GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVT 188 (367)
T ss_dssp SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSC
T ss_pred CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCC
Confidence 678999884 367999999999999999999999999 999999999999999999999999999865543 456789
Q ss_pred CCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhh-h------cCc---------------ccccc---
Q 018381 82 LAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-R------GKN---------------FLMLM--- 135 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-~------~~~---------------~~~~~--- 135 (357)
+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+...... . +.. +....
T Consensus 189 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (367)
T 1cm8_A 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL 268 (367)
T ss_dssp GGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCC
T ss_pred CCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCC
Confidence 99999999887 6789999999999999999999999875421110 0 000 00000
Q ss_pred -ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 -DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 -~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...+. ......++.+.+||.+||+.||++|||+.++++|
T Consensus 269 ~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 269 EKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp CCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00011 1223457789999999999999999999999997
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=240.39 Aligned_cols=170 Identities=18% Similarity=0.196 Sum_probs=137.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee---CCCCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~-- 75 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+.+ ++||||||+||++ +.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 164 (304)
T 2jam_A 88 VSGGELFDRIL--ERGVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164 (304)
T ss_dssp CCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred CCCccHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence 46899999995 3567999999999999999999999999 9999999999999 77889999999998765433
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...+........++.+.++|
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~li 242 (304)
T 2jam_A 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEG--YYEFESPFWDDISESAKDFI 242 (304)
T ss_dssp HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHC--CCCCCTTTTTTSCHHHHHHH
T ss_pred ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCCCCccccccCCHHHHHHH
Confidence 2346899999999999888999999999999999999999988754322211110000 00111223345678899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 018381 156 SRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+||..||++|||+.+++++
T Consensus 243 ~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 243 CHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp HHHHCSSTTTSCCHHHHHTS
T ss_pred HHHcCCChhHCcCHHHHhcC
Confidence 99999999999999999986
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=246.15 Aligned_cols=118 Identities=16% Similarity=0.177 Sum_probs=104.5
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCceeecCCCCCeeeC--CCCCeEEecCCcccccCCC-Cc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS--KGRALYHDLNTYRILFD--QDGNPRLSCFGLMKNSRDG-KS 77 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~--~~~iiH~dlkp~Nill~--~~~~~kl~Dfg~~~~~~~~-~~ 77 (357)
+|+|.+++.....+.+++..+..++.||+.||.|||+ .+ |+||||||+|||++ .++.+||+|||+++..... ..
T Consensus 139 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~~ 217 (382)
T 2vx3_A 139 SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ 217 (382)
T ss_dssp CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCS
T ss_pred CCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccCceeccccccc
Confidence 5799999975555679999999999999999999995 56 99999999999995 4778999999999866543 45
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcc
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH 121 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~ 121 (357)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 218 ~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 218 YIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp SCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 67899999999999989999999999999999999999998754
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=246.30 Aligned_cols=172 Identities=19% Similarity=0.262 Sum_probs=134.6
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeecCCCCCeeeC------CCCCeEEecCCcccccCCC
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFD------QDGNPRLSCFGLMKNSRDG 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~iiH~dlkp~Nill~------~~~~~kl~Dfg~~~~~~~~ 75 (357)
+|+|.+++.......+++..++.++.||+.||.|||++ + |+||||||+|||++ ..+.+||+|||+++.....
T Consensus 113 ~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~ 191 (373)
T 1q8y_A 113 GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191 (373)
T ss_dssp CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC
T ss_pred CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC
Confidence 78999999755567799999999999999999999998 8 99999999999994 4457999999999865543
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhc--------------------------
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------------------------- 128 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-------------------------- 128 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||..........
T Consensus 192 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 271 (373)
T 1q8y_A 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYT 271 (373)
T ss_dssp CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTH
T ss_pred CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchh
Confidence 45578999999999999889999999999999999999999886432100000
Q ss_pred ------Ccccccccc----------ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 129 ------KNFLMLMDS----------CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 129 ------~~~~~~~~~----------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
......... .....++...+..+.+||.+||+.||++|||+.++++|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 272 RTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred hhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 000000000 00123456778899999999999999999999999997
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=238.31 Aligned_cols=169 Identities=17% Similarity=0.214 Sum_probs=134.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCeeeC-CCCCeEEecCCcccccCCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~~-- 76 (357)
+++|+|.+++. ..+.+++..++.++.||+.||.|||+.+ +++||||||+||+++ .++.+||+|||++.......
T Consensus 111 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (290)
T 1t4h_A 111 MTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 188 (290)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred cCCCCHHHHHH--HccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccc
Confidence 47899999995 3477999999999999999999999986 599999999999997 78999999999997554432
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++. +.++.++|||||||++|+|++|+.||........... ..........++...++.+.++|.
T Consensus 189 ~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~ 264 (290)
T 1t4h_A 189 AVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR---RVTSGVKPASFDKVAIPEVKEIIE 264 (290)
T ss_dssp ESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH---HHTTTCCCGGGGGCCCHHHHHHHH
T ss_pred cccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHH---HHhccCCccccCCCCCHHHHHHHH
Confidence 456899999999887 5689999999999999999999999865321111000 001111111223334578999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..||.+|||+.++++|
T Consensus 265 ~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 265 GCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHSCSSGGGSCCHHHHHTS
T ss_pred HHccCChhhCCCHHHHhhC
Confidence 9999999999999999987
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=250.16 Aligned_cols=170 Identities=15% Similarity=0.195 Sum_probs=127.2
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------- 75 (357)
+|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 113 ~~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 189 (432)
T 3n9x_A 113 DSDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVN 189 (432)
T ss_dssp SEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC----------
T ss_pred CcCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccc
Confidence 578999995 4567999999999999999999999999 999999999999999999999999999865322
Q ss_pred -------------------CccccCCCCCCcccc-ccCCCCccccccchHHHHHHHHhCCCCCCcchhH---hhhcC---
Q 018381 76 -------------------KSYSTNLAFTPPEYL-RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD---LIRGK--- 129 (357)
Q Consensus 76 -------------------~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~---~~~~~--- 129 (357)
....||++|+|||++ .+..++.++|||||||++|||++|..|+...... .+.+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~ 269 (432)
T 3n9x_A 190 DLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCF 269 (432)
T ss_dssp ---------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSC
T ss_pred cccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCcccc
Confidence 345789999999986 4566899999999999999999865443321000 00000
Q ss_pred -----------------------------------------cccccccc-ccCCCC-----ChhhHHHHHHHHHHhccCC
Q 018381 130 -----------------------------------------NFLMLMDS-CLEGHF-----SNDDGTELVRLASRCLQYE 162 (357)
Q Consensus 130 -----------------------------------------~~~~~~~~-~~~~~~-----~~~~~~~~~~li~~cl~~~ 162 (357)
.....+.. ...... .+..++.+.+||.+||+.|
T Consensus 270 ~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~d 349 (432)
T 3n9x_A 270 PLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFN 349 (432)
T ss_dssp C----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSS
T ss_pred ccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCC
Confidence 00000000 000000 0235678999999999999
Q ss_pred CCCCCCHHHHHHH
Q 018381 163 PRERPNAKSLVAS 175 (357)
Q Consensus 163 p~~Rps~~~v~~~ 175 (357)
|.+|||+.++++|
T Consensus 350 P~~R~ta~e~L~H 362 (432)
T 3n9x_A 350 PNKRITIDQALDH 362 (432)
T ss_dssp TTTSCCHHHHHTC
T ss_pred cccCCCHHHHhcC
Confidence 9999999999997
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-32 Score=252.26 Aligned_cols=172 Identities=15% Similarity=0.204 Sum_probs=135.5
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeecCCCCCeeeCCCC----------------------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDG---------------------- 59 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~iiH~dlkp~Nill~~~~---------------------- 59 (357)
+|+|.+++.....+.+++.+++.++.||+.||.|||++ + |+||||||+|||++.++
T Consensus 128 ~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (397)
T 1wak_A 128 GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPS 206 (397)
T ss_dssp CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHHHHHC-----------
T ss_pred CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCC
Confidence 67777777655557899999999999999999999998 8 99999999999999775
Q ss_pred ---------------------------CeEEecCCcccccCCC-CccccCCCCCCccccccCCCCccccccchHHHHHHH
Q 018381 60 ---------------------------NPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDL 111 (357)
Q Consensus 60 ---------------------------~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 111 (357)
.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 286 (397)
T 1wak_A 207 GSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFEL 286 (397)
T ss_dssp ----------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHH
T ss_pred CCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHH
Confidence 7999999999865433 455789999999999998899999999999999999
Q ss_pred HhCCCCCCcchhHh-------hh------cC---------ccc-cccc---------c----------ccCCCCChhhHH
Q 018381 112 LSGKHIPPSHALDL-------IR------GK---------NFL-MLMD---------S----------CLEGHFSNDDGT 149 (357)
Q Consensus 112 ~~g~~~~~~~~~~~-------~~------~~---------~~~-~~~~---------~----------~~~~~~~~~~~~ 149 (357)
++|+.||....... .. +. ... .... . ......+...+.
T Consensus 287 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (397)
T 1wak_A 287 ATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAA 366 (397)
T ss_dssp HHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHH
T ss_pred hhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHH
Confidence 99999886431100 00 00 000 0000 0 001123566788
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+.+||.+||+.||++|||+.++++|
T Consensus 367 ~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 367 GFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHhccChhhcCCHHHHhhC
Confidence 89999999999999999999999987
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=254.07 Aligned_cols=167 Identities=14% Similarity=0.208 Sum_probs=124.8
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Ccccc
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYST 80 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~g 80 (357)
|+|.+.+. ..+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....|
T Consensus 151 ~~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~g 225 (464)
T 3ttj_A 151 ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 225 (464)
T ss_dssp EEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----C
T ss_pred CCHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCcc
Confidence 45666662 34999999999999999999999999 999999999999999999999999999866543 34678
Q ss_pred CCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC--------------ccc----ccccc-----
Q 018381 81 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------------NFL----MLMDS----- 137 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~--------------~~~----~~~~~----- 137 (357)
|+.|+|||++.+..++.++|||||||++|||++|+.||.+......-.. ... .....
T Consensus 226 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~ 305 (464)
T 3ttj_A 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA 305 (464)
T ss_dssp CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCC
T ss_pred cccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccC
Confidence 9999999999999999999999999999999999999876421100000 000 00000
Q ss_pred --ccCCCCC-----------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 --CLEGHFS-----------NDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 --~~~~~~~-----------~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+...++ ...++++.+||.+||+.||++|||+.++++|
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 306 GLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp CCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 1126789999999999999999999999998
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=243.44 Aligned_cols=172 Identities=17% Similarity=0.174 Sum_probs=134.7
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee-------------------CCCCCeEE
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF-------------------DQDGNPRL 63 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill-------------------~~~~~~kl 63 (357)
+|+|.+++.......+++.+++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||
T Consensus 105 ~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl 183 (355)
T 2eu9_A 105 GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 183 (355)
T ss_dssp CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEE
T ss_pred CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecccccccccccccccccccCCCcEEE
Confidence 677888886555568999999999999999999999999 9999999999999 56788999
Q ss_pred ecCCcccccCCC-CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhc-------Cccccc-
Q 018381 64 SCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------KNFLML- 134 (357)
Q Consensus 64 ~Dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-------~~~~~~- 134 (357)
+|||+++..... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.......... .....+
T Consensus 184 ~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~ 263 (355)
T 2eu9_A 184 ADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMI 263 (355)
T ss_dssp CCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred eecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHh
Confidence 999999865443 45678999999999999899999999999999999999999987542211000 000000
Q ss_pred -----------------------------ccc-ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 135 -----------------------------MDS-CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 135 -----------------------------~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
... ..........+..+.+||.+||..||.+|||+.++++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 264 HRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp HHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 00001123456789999999999999999999999986
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=240.39 Aligned_cols=172 Identities=20% Similarity=0.227 Sum_probs=136.8
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++.......+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....
T Consensus 102 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (326)
T 1blx_A 102 DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180 (326)
T ss_dssp SCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCC
T ss_pred CCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCcccccccCCCCccccc
Confidence 479999996555567999999999999999999999999 999999999999999999999999998765432 3456
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc-----------ccc---c-------cccc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------FLM---L-------MDSC 138 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~-----------~~~---~-------~~~~ 138 (357)
||+.|+|||++.+..++.++|||||||++|+|++|+.||............ +.. . ....
T Consensus 181 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (326)
T 1blx_A 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQ 260 (326)
T ss_dssp CCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCC
T ss_pred cccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcc
Confidence 899999999999888999999999999999999999988754221110000 000 0 0000
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 139 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 139 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....+...++..+.++|.+||..||.+|||+.+++.|
T Consensus 261 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 261 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0011234567889999999999999999999999976
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-32 Score=254.84 Aligned_cols=162 Identities=14% Similarity=0.113 Sum_probs=130.2
Q ss_pred CCCchhhhhc-----cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-
Q 018381 2 PNETLSKHLF-----HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 75 (357)
Q Consensus 2 ~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~- 75 (357)
.+|+|.+++. ...++.+++..++.++.||++||.|||+++ ||||||||+||||+.++.+||+|||+++.....
T Consensus 187 ~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~ 265 (413)
T 3dzo_A 187 MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASA 265 (413)
T ss_dssp CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCGGGCEETTEEE
T ss_pred hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcccceEEEecCCeEEEEeccceeecCCcc
Confidence 4678888883 223567899999999999999999999999 999999999999999999999999998865543
Q ss_pred CccccCCCCCCcccc----------ccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCCh
Q 018381 76 KSYSTNLAFTPPEYL----------RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 145 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
....| +.|+|||++ .+..++.++|||||||++|||++|+.||....... . ....+.. ..
T Consensus 266 ~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~----~----~~~~~~~--~~ 334 (413)
T 3dzo_A 266 VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALG----G----SEWIFRS--CK 334 (413)
T ss_dssp CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGS----C----SGGGGSS--CC
T ss_pred ccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhh----h----HHHHHhh--cc
Confidence 34567 999999999 55567889999999999999999999986542211 1 1111111 12
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+++.+.+||.+||..||++||++.+++++
T Consensus 335 ~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 335 NIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp CCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 345789999999999999999998888654
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-32 Score=245.24 Aligned_cols=170 Identities=11% Similarity=0.133 Sum_probs=130.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 109 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 187 (326)
T 2x7f_A 109 CGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN 187 (326)
T ss_dssp CTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC----------
T ss_pred CCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccc
Confidence 46789999996544578999999999999999999999999 999999999999999999999999998765432 3
Q ss_pred ccccCCCCCCccccc-----cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 77 SYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
...||+.|+|||++. +..++.++|||||||++|+|++|..||.......... ...........+...+..+
T Consensus 188 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l 263 (326)
T 2x7f_A 188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----LIPRNPAPRLKSKKWSKKF 263 (326)
T ss_dssp ---CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH----HHHHSCCCCCSCSCSCHHH
T ss_pred cccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH----HhhcCccccCCccccCHHH
Confidence 457899999999987 4668899999999999999999998876532211110 0011111111233456789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 018381 152 VRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.++|.+||..||.+|||+.+++++
T Consensus 264 ~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 264 QSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccChhhCCCHHHHhhC
Confidence 999999999999999999999986
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-32 Score=239.02 Aligned_cols=170 Identities=18% Similarity=0.237 Sum_probs=131.2
Q ss_pred CCCCchhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee---CCCCCeEEecCCcccccCCC
Q 018381 1 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~ 75 (357)
+++|+|.+++... .+..+++..++.++.||+.||.|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc
Confidence 4689999998532 3478999999999999999999999999 9999999999999 45678999999999765433
Q ss_pred ---CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 76 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
....||+.|+|||++. +.++.++||||||+++|+|++|+.||............... ..... ......++.+.
T Consensus 181 ~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~ 256 (285)
T 3is5_A 181 EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK--EPNYA-VECRPLTPQAV 256 (285)
T ss_dssp ------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCC-C--CCCCHHHH
T ss_pred ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC--Ccccc-cccCcCCHHHH
Confidence 3457899999999986 57889999999999999999999998765433322211111 11111 01122467899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 018381 153 RLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
++|.+||+.||++|||+.+++++
T Consensus 257 ~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 257 DLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp HHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 99999999999999999999986
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-32 Score=243.43 Aligned_cols=171 Identities=20% Similarity=0.259 Sum_probs=132.0
Q ss_pred CchhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----C
Q 018381 4 ETLSKHLFHW----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----G 75 (357)
Q Consensus 4 gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~ 75 (357)
|+|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .
T Consensus 87 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (317)
T 2pmi_A 87 NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF 165 (317)
T ss_dssp CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCC
T ss_pred CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCCCcccC
Confidence 6888888532 2256999999999999999999999999 99999999999999999999999999986542 2
Q ss_pred CccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc----------c----cccc--cc-
Q 018381 76 KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN----------F----LMLM--DS- 137 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~----------~----~~~~--~~- 137 (357)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||............ . .... ..
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 245 (317)
T 2pmi_A 166 SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPN 245 (317)
T ss_dssp CCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTT
T ss_pred CCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccc
Confidence 34578999999999976 46799999999999999999999998754321110000 0 0000 00
Q ss_pred -----------ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 -----------CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 -----------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+....+...+..+.+||.+||+.||++|||+.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 246 IQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00011122356789999999999999999999999986
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=236.01 Aligned_cols=169 Identities=17% Similarity=0.131 Sum_probs=134.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
+++|+|.+++. ....+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 87 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 87 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 46889999994 4567999999999999999999999999 99999999999999999999999999875432
Q ss_pred CCccccCCCCCCccccccCCC-CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 75 GKSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 75 ~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
.....||+.|+|||++.+..+ +.++||||||+++|+|++|..||.......... ................++.+.+
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 240 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY---SDWKEKKTYLNPWKKIDSAPLA 240 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHH---HHHHTTCTTSTTGGGSCHHHHH
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHH---HHhhhcccccCchhhcCHHHHH
Confidence 234568999999999987665 678999999999999999999986532111000 0000011111112346778999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+|.+||..||++|||+.+++++
T Consensus 241 li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 241 LLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHCCCCchhCCCHHHHhcC
Confidence 9999999999999999999886
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-32 Score=248.12 Aligned_cols=173 Identities=20% Similarity=0.271 Sum_probs=134.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeecCCCCCeeeCCCCCeEEecCCcccccC--CCCc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR--DGKS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~--~~~~ 77 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||++ + |+||||||+|||++.++.+||+|||+++... ....
T Consensus 113 ~~~~~L~~~l~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 189 (360)
T 3eqc_A 113 MDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 189 (360)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCcccccccccC
Confidence 57899999995 346799999999999999999999996 7 9999999999999999999999999986432 2345
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC----------------------------
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK---------------------------- 129 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~---------------------------- 129 (357)
..||+.|+|||++.+..++.++|||||||++|+|++|+.||...........
T Consensus 190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (360)
T 3eqc_A 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269 (360)
T ss_dssp -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------------
T ss_pred CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccccc
Confidence 6789999999999998999999999999999999999999875432211100
Q ss_pred ------ccccc----cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 130 ------NFLML----MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 130 ------~~~~~----~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
..... .............+..+.+||.+||+.||.+|||+.++++|-
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred CCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 00000 000011111223567899999999999999999999999873
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-32 Score=245.92 Aligned_cols=176 Identities=19% Similarity=0.275 Sum_probs=140.3
Q ss_pred CCCCchhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC---CCCeEEecCCccccc
Q 018381 1 MPNETLSKHLFHWEN-----QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~ 72 (357)
++||+|.+++..... ..+++.+++.++.||+.||.|||+.+ |+||||||+|||++. +..+||+|||+++..
T Consensus 115 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~ 193 (327)
T 2yfx_A 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193 (327)
T ss_dssp CTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred CCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECcccccccc
Confidence 468999999964321 45999999999999999999999999 999999999999984 446999999998743
Q ss_pred CC------CCccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCCh
Q 018381 73 RD------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 145 (357)
Q Consensus 73 ~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
.. .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||......... ..+........+.
T Consensus 194 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~ 268 (327)
T 2yfx_A 194 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL-----EFVTSGGRMDPPK 268 (327)
T ss_dssp HC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----HHHHTTCCCCCCT
T ss_pred ccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHH-----HHHhcCCCCCCCC
Confidence 22 234467889999999998899999999999999999998 88777654322211 1111111223345
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.++..+.++|.+||..||.+|||+.+++++|+.+...
T Consensus 269 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 269 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 6678899999999999999999999999999887654
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-32 Score=243.19 Aligned_cols=171 Identities=18% Similarity=0.257 Sum_probs=129.3
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
+|+|.+++.. .+..+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 83 ~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 160 (324)
T 3mtl_A 83 DKDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE 160 (324)
T ss_dssp SEEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC----------
T ss_pred ccCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccc
Confidence 4688888853 4567999999999999999999999999 999999999999999999999999998755432 234
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcc-------cccccc-------------
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-------LMLMDS------------- 137 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~-------~~~~~~------------- 137 (357)
.||+.|+|||++.+ ..++.++|||||||++|+|++|+.||............. ....+.
T Consensus 161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (324)
T 3mtl_A 161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYP 240 (324)
T ss_dssp --CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCC
T ss_pred cCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccc
Confidence 67999999999876 567999999999999999999999987643221110000 000000
Q ss_pred ccC----CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 CLE----GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 ~~~----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
... .......++.+.+||.+||+.||.+|||+.++++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 241 KYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000 00112356789999999999999999999999986
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-32 Score=248.90 Aligned_cols=169 Identities=17% Similarity=0.201 Sum_probs=120.0
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-CccccC
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt 81 (357)
+++|.+++ ..+.+++..+..++.||++||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....||
T Consensus 117 ~~~L~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t 192 (367)
T 2fst_X 117 GADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVAT 192 (367)
T ss_dssp CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC---------------CC
T ss_pred CCCHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeeccccccccccCCCcCcC
Confidence 67888888 3467999999999999999999999999 999999999999999999999999999865443 456789
Q ss_pred CCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhc-------Cc------------ccccccc---c
Q 018381 82 LAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------KN------------FLMLMDS---C 138 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-------~~------------~~~~~~~---~ 138 (357)
+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+........ .. ....... .
T Consensus 193 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~ 272 (367)
T 2fst_X 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 272 (367)
T ss_dssp CTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCC
T ss_pred cCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCC
Confidence 99999999987 678999999999999999999999987642111000 00 0000000 0
Q ss_pred cCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 139 LEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 139 ~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.... .....++.+.+||.+||+.||++|||+.+++.|
T Consensus 273 ~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 273 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 012346789999999999999999999999987
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=246.78 Aligned_cols=168 Identities=22% Similarity=0.257 Sum_probs=134.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+|+||||+||+++.+|.+||+|||++...... ..
T Consensus 182 ~~g~~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~ 258 (365)
T 2y7j_A 182 MRKGELFDYLT--EKVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE 258 (365)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCcccccCCCccccc
Confidence 57899999995 3567999999999999999999999999 999999999999999999999999998765443 34
Q ss_pred cccCCCCCCcccccc------CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCC--CChhhHH
Q 018381 78 YSTNLAFTPPEYLRT------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH--FSNDDGT 149 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 149 (357)
..||+.|+|||++.+ ..++.++|||||||++|+|++|..||........... ......... .....+.
T Consensus 259 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~ 334 (365)
T 2y7j_A 259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM----IMEGQYQFSSPEWDDRSS 334 (365)
T ss_dssp CCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHTCCCCCHHHHSSSCH
T ss_pred CCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHH----HHhCCCCCCCcccccCCH
Confidence 578999999999863 3578899999999999999999999865422111100 000000000 0013456
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 150 ELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 150 ~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+.++|.+||..||++|||+.+++++
T Consensus 335 ~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 335 TVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 79999999999999999999999987
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=237.01 Aligned_cols=165 Identities=19% Similarity=0.262 Sum_probs=134.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee---CCCCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~-- 75 (357)
++||+|.+++. ..+.+++.+++.++.|++.||.|||+++ ++||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 88 CTGGELFERVV--HKRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp CCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred cCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 46899999985 4567999999999999999999999999 9999999999999 78889999999998765433
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCCh----hhHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN----DDGTE 150 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 150 (357)
....||+.|+|||++.+ .++.++||||||+++|+|++|+.||........... ...... .++. ..++.
T Consensus 165 ~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~ 237 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLK----IREGTF--TFPEKDWLNVSPQ 237 (277)
T ss_dssp BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHCCC--CCCHHHHTTSCHH
T ss_pred hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHH----HHhCCC--CCCchhhhcCCHH
Confidence 34578999999999875 589999999999999999999999876432221111 001111 1121 35678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.++|.+||+.||.+|||+.+++++
T Consensus 238 ~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 238 AESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999999999876
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-31 Score=239.74 Aligned_cols=169 Identities=17% Similarity=0.186 Sum_probs=132.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-CeEEecCCcccccCCC---C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDG---K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~---~ 76 (357)
+++|+|.+++. .+++.++..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++..... .
T Consensus 115 ~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~ 188 (330)
T 3nsz_A 115 VNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 188 (330)
T ss_dssp CCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCC
T ss_pred cCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccc
Confidence 46889988883 4899999999999999999999999 99999999999999776 8999999999865433 3
Q ss_pred ccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHh------------------hhcC--------
Q 018381 77 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL------------------IRGK-------- 129 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~------------------~~~~-------- 129 (357)
...||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... +...
T Consensus 189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (330)
T 3nsz_A 189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 268 (330)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHH
T ss_pred cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccch
Confidence 4578999999999987 668999999999999999999999885321100 0000
Q ss_pred ------ccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 130 ------NFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 130 ------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..............+...++.+.+||.+||+.||.+|||+.++++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 269 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000011111122233467889999999999999999999999986
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=241.00 Aligned_cols=166 Identities=17% Similarity=0.196 Sum_probs=137.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++. ..+.+++.+++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 123 ~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 199 (335)
T 2owb_A 123 CRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 199 (335)
T ss_dssp CTTCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCCCCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccCccccc
Confidence 46899999884 3468999999999999999999999999 999999999999999999999999999865422 3
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++||||||+++|+|++|+.||.......... ..... ....+..+++.+.++|.
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~li~ 273 (335)
T 2owb_A 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL----RIKKN--EYSIPKHINPVAASLIQ 273 (335)
T ss_dssp CCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----HHHHT--CCCCCTTSCHHHHHHHH
T ss_pred ccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHH----HHhcC--CCCCCccCCHHHHHHHH
Confidence 4568999999999998889999999999999999999999987543221110 00011 11234456678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..||++|||+.+++++
T Consensus 274 ~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 274 KMLQTDPTARPTINELLND 292 (335)
T ss_dssp HHTCSSGGGSCCGGGGGGS
T ss_pred HHccCChhHCcCHHHHhcC
Confidence 9999999999999999986
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.5e-32 Score=245.03 Aligned_cols=156 Identities=22% Similarity=0.183 Sum_probs=120.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC--CeEEecCCcccccCC--------CCccccCCCCCC
Q 018381 17 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG--NPRLSCFGLMKNSRD--------GKSYSTNLAFTP 86 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~--------~~~~~gt~~y~a 86 (357)
.+++..++.++.||+.||.|||+++ |+||||||+||+++.++ .+||+|||+++.... .....||+.|+|
T Consensus 164 ~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a 242 (345)
T 3hko_A 164 VQREKLISNIMRQIFSALHYLHNQG-ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVA 242 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCC
T ss_pred cccHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccC
Confidence 3578889999999999999999999 99999999999998776 899999999975432 124568999999
Q ss_pred cccccc--CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCC
Q 018381 87 PEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 164 (357)
Q Consensus 87 PE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~ 164 (357)
||++.+ ..++.++|||||||++|+|++|+.||................ .....+.....++.+.++|.+||..||.
T Consensus 243 PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~ 320 (345)
T 3hko_A 243 PEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKK--LCFENPNYNVLSPLARDLLSNLLNRNVD 320 (345)
T ss_dssp HHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCTTSGGGGGSCHHHHHHHHHHSCSCTT
T ss_pred chhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcc--cccCCcccccCCHHHHHHHHHHcCCChh
Confidence 999975 678899999999999999999999987643222111111000 0011111223567899999999999999
Q ss_pred CCCCHHHHHHH
Q 018381 165 ERPNAKSLVAS 175 (357)
Q Consensus 165 ~Rps~~~v~~~ 175 (357)
+|||+.+++++
T Consensus 321 ~Rps~~~~l~h 331 (345)
T 3hko_A 321 ERFDAMRALQH 331 (345)
T ss_dssp TSCCHHHHHHS
T ss_pred HCCCHHHHhcC
Confidence 99999999986
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-32 Score=239.70 Aligned_cols=175 Identities=20% Similarity=0.262 Sum_probs=138.1
Q ss_pred CCCCchhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCC----ceeecCCCCCeeeCCCCCeEEecCCcccccCC
Q 018381 1 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGR----ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~----iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 74 (357)
+++|+|.+++... .+..+++.+++.++.||+.||.|||+.+. ++||||||+||+++.++.+||+|||+++....
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168 (279)
T ss_dssp CTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC--
T ss_pred CCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecc
Confidence 4688999999532 34569999999999999999999999763 99999999999999999999999999886654
Q ss_pred CC----ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 75 GK----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 75 ~~----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
.. ...||+.|+|||++.+..++.++||||||+++|+|++|+.||........... +........+...+..
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-----i~~~~~~~~~~~~~~~ 243 (279)
T 2w5a_A 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK-----IREGKFRRIPYRYSDE 243 (279)
T ss_dssp -CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-----HHHTCCCCCCTTSCHH
T ss_pred ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHH-----HhhcccccCCcccCHH
Confidence 33 34689999999999988899999999999999999999988875432221111 1111112344566788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
+.++|.+||..||.+|||+.++++++....
T Consensus 244 l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 244 LNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred HHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 999999999999999999999999876543
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-31 Score=253.15 Aligned_cols=169 Identities=18% Similarity=0.168 Sum_probs=134.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC---CCCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---QDGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~-- 75 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 103 ~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 179 (486)
T 3mwu_A 103 YTGGELFDEII--KRKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (486)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence 57899999985 3467999999999999999999999999 99999999999995 4567999999999865543
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....||+.|+|||++.+ .++.++|||||||++|+|++|..||............... ......+....+++.+.++
T Consensus 180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~l 256 (486)
T 3mwu_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETG--KYAFDLPQWRTISDDAKDL 256 (486)
T ss_dssp --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCSCSGGGGGSCHHHHHH
T ss_pred cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCcccCCCCHHHHHH
Confidence 34578999999999975 6899999999999999999999998765322211110000 0011111123467889999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
|.+||+.||.+|||+.++++|
T Consensus 257 i~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 257 IRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HHHHTCSSTTTSCCHHHHHHC
T ss_pred HHHHcCCChhhCcCHHHHhcC
Confidence 999999999999999999997
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-32 Score=238.24 Aligned_cols=170 Identities=16% Similarity=0.183 Sum_probs=134.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC----CeEEecCCcccccCCC-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~~~~~~~~- 75 (357)
+++|+|.+++. ....+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||++......
T Consensus 90 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~ 166 (283)
T 3bhy_A 90 VSGGELFDFLA--EKESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 166 (283)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccceeccCCC
Confidence 46899999995 3567999999999999999999999999 99999999999998877 7999999999865443
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
....||+.|+|||++.+..++.++||||||+++|+|++|..||............ ...............++.+.+
T Consensus 167 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 244 (283)
T 3bhy_A 167 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI--SAVNYDFDEEYFSNTSELAKD 244 (283)
T ss_dssp -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH--HTTCCCCCHHHHTTCCHHHHH
T ss_pred cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHh--HhcccCCcchhcccCCHHHHH
Confidence 2446899999999999888999999999999999999999988764322111100 000000111111245678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+|.+||..||++|||+.+++++
T Consensus 245 li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 245 FIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHC
T ss_pred HHHHHccCCHhHCcCHHHHHhC
Confidence 9999999999999999999985
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-32 Score=251.58 Aligned_cols=181 Identities=13% Similarity=0.096 Sum_probs=139.6
Q ss_pred CCCCchhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee----CCCCCeEEecCCcccccCCC
Q 018381 1 MPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~ 75 (357)
++||+|.+++.... ...+++.+++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 91 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp CTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 46899999995322 234999999999999999999999999 9999999999999 77778999999999865543
Q ss_pred ---CccccCCCCCCcccccc--------CCCCccccccchHHHHHHHHhCCCCCCcchh-----Hh----hhcCcc----
Q 018381 76 ---KSYSTNLAFTPPEYLRT--------GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL-----DL----IRGKNF---- 131 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-----~~----~~~~~~---- 131 (357)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .. ......
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (396)
T 4eut_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (396)
T ss_dssp GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCE
T ss_pred CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccch
Confidence 24568999999999865 4567899999999999999999998753210 00 000000
Q ss_pred --cccc--------ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 132 --LMLM--------DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 132 --~~~~--------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.... ........+...+..+.+++.+||..||++||++.++++.+..+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred hheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 0000 00111234467888999999999999999999999999998776543
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=254.88 Aligned_cols=170 Identities=19% Similarity=0.161 Sum_probs=136.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee---CCCCCeEEecCCcccccCCCC-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~- 76 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 108 ~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 184 (484)
T 3nyv_A 108 YTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184 (484)
T ss_dssp CCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc
Confidence 47899999995 4578999999999999999999999999 9999999999999 567889999999998665443
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...||+.|+|||++.+ .++.++|||||||++|+|++|..||............... ...+..+....+++.+.++
T Consensus 185 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~l 261 (484)
T 3nyv_A 185 MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG--KYTFELPQWKKVSESAKDL 261 (484)
T ss_dssp HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCSGGGGGSCHHHHHH
T ss_pred cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCCCCCcccccCCHHHHHH
Confidence 3478999999999975 7899999999999999999999998764322211110000 0011111123567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 018381 155 ASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l 176 (357)
|.+||+.||.+|||+.++++|-
T Consensus 262 i~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 262 IRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp HHHHTCSSGGGSCCHHHHHTSH
T ss_pred HHHHCCCChhHCcCHHHHhhCh
Confidence 9999999999999999999873
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=238.37 Aligned_cols=174 Identities=18% Similarity=0.297 Sum_probs=132.3
Q ss_pred CCCCchhhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC
Q 018381 1 MPNETLSKHLFH------WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 74 (357)
Q Consensus 1 ~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 74 (357)
++||+|.+++.. .....+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 173 (303)
T 2vwi_A 95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173 (303)
T ss_dssp CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHHHCC-
T ss_pred ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchheecc
Confidence 468999999852 13567999999999999999999999999 99999999999999999999999999875432
Q ss_pred C---------CccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhh----cCccccccccccC
Q 018381 75 G---------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR----GKNFLMLMDSCLE 140 (357)
Q Consensus 75 ~---------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~ 140 (357)
. ....||+.|+|||++.+ ..++.++||||||+++|+|++|+.||......... .............
T Consensus 174 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (303)
T 2vwi_A 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD 253 (303)
T ss_dssp --------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC----
T ss_pred CCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccccccc
Confidence 2 23468999999999876 56889999999999999999999988653211110 0000000000111
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 141 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 141 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.......+..+.++|.+||..||.+|||+.+++++
T Consensus 254 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 254 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp -CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred chhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 12233456789999999999999999999999986
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=239.17 Aligned_cols=172 Identities=16% Similarity=0.202 Sum_probs=129.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++. ..+.+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 84 ~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (311)
T 4agu_A 84 CDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD 160 (311)
T ss_dssp CSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred CCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccC
Confidence 46788888874 4577999999999999999999999999 999999999999999999999999999865432 2
Q ss_pred ccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhc-------------------Cccccccc
Q 018381 77 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------------------KNFLMLMD 136 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-------------------~~~~~~~~ 136 (357)
...||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......... ........
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (311)
T 4agu_A 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240 (311)
T ss_dssp -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCc
Confidence 4468999999999976 567999999999999999999999887642211100 00000000
Q ss_pred cccCCCC------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 137 SCLEGHF------SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 137 ~~~~~~~------~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....... .+.++..+.++|.+||..||.+|||+.++++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000 12456789999999999999999999999987
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-32 Score=244.58 Aligned_cols=170 Identities=18% Similarity=0.206 Sum_probs=129.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC---eEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~~~~~~~~-- 75 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++.....
T Consensus 93 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 93 MRGGSILSHIH--KRRHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred CCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 57899999995 3467999999999999999999999999 999999999999998776 999999998754321
Q ss_pred ---------CccccCCCCCCcccccc-----CCCCccccccchHHHHHHHHhCCCCCCcchhHhh-----------hcCc
Q 018381 76 ---------KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-----------RGKN 130 (357)
Q Consensus 76 ---------~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-----------~~~~ 130 (357)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ ....
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 249 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH
Confidence 13358999999999875 4578899999999999999999999865311000 0000
Q ss_pred cccccccccCCCCC----hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 131 FLMLMDSCLEGHFS----NDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 131 ~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
......... .++ ...++.+.++|.+||..||++|||+.++++|
T Consensus 250 ~~~i~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 250 FESIQEGKY--EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHCCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhccCc--ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 000000111 122 1356789999999999999999999999997
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=242.44 Aligned_cols=172 Identities=19% Similarity=0.164 Sum_probs=132.2
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
.|+|.+++. .....+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 95 ~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 172 (346)
T 1ua2_A 95 ETDLEVIIK-DNSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQ 172 (346)
T ss_dssp SEEHHHHHT-TCCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCS
T ss_pred CCCHHHHHH-hcCcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCcc
Confidence 358888884 34567999999999999999999999999 999999999999999999999999999865432 345
Q ss_pred ccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccc-----------c---cccccc---C
Q 018381 79 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL-----------M---LMDSCL---E 140 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-----------~---~~~~~~---~ 140 (357)
.||+.|+|||++.+. .++.++|||||||++|+|++|..||............+. . ..+... .
T Consensus 173 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (346)
T 1ua2_A 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSF 252 (346)
T ss_dssp CCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCC
T ss_pred cccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCccccccccc
Confidence 789999999999764 478899999999999999999988765422111000000 0 000000 0
Q ss_pred CCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 141 GHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 141 ~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
... ....++.+.++|.+||+.||.+|||+.++++|-
T Consensus 253 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 253 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp CCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred CCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 000 134467899999999999999999999999974
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=250.59 Aligned_cols=171 Identities=25% Similarity=0.277 Sum_probs=129.9
Q ss_pred Cchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC-CCeEEecCCcccccCCC---Cc
Q 018381 4 ETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 4 gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~---~~ 77 (357)
|+|.+.+.. ..+..+++..++.++.||++||.|||+.+ |+||||||+||||+.+ +.+||+|||+++..... ..
T Consensus 137 ~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~ 215 (420)
T 1j1b_A 137 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215 (420)
T ss_dssp EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCS
T ss_pred ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCcee
Confidence 345554421 24678999999999999999999999999 9999999999999965 56899999999865432 35
Q ss_pred cccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHh-hhc-----------------Ccccccc---
Q 018381 78 YSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRG-----------------KNFLMLM--- 135 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~-----------------~~~~~~~--- 135 (357)
..||+.|+|||++.+. .++.++|||||||++|||++|+.||.+..... +.. ..+....
T Consensus 216 ~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~ 295 (420)
T 1j1b_A 216 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQ 295 (420)
T ss_dssp CCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCC
T ss_pred eeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCc
Confidence 6789999999999764 68999999999999999999999987642111 000 0000000
Q ss_pred --ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 --DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 --~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...+...++...++++.+||.+||+.||.+|||+.++++|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 296 IKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 0000011234457889999999999999999999999986
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=246.12 Aligned_cols=171 Identities=20% Similarity=0.244 Sum_probs=132.9
Q ss_pred Cchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC-CCCCeEEecCCcccccCCC---Cc
Q 018381 4 ETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 4 gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
|+|.+.+.. ..++.+++..++.++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++..... ..
T Consensus 122 ~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g-i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 200 (383)
T 3eb0_A 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG-ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVA 200 (383)
T ss_dssp EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCC
T ss_pred ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc-CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcC
Confidence 566666642 25678999999999999999999999999 99999999999997 6889999999999865433 34
Q ss_pred cccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC-----------------------cccc
Q 018381 78 YSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------------------NFLM 133 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-----------------------~~~~ 133 (357)
..+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.+......... .+..
T Consensus 201 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~ 280 (383)
T 3eb0_A 201 YICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPT 280 (383)
T ss_dssp CCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCC
T ss_pred cccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCc
Confidence 5789999999998764 489999999999999999999998876421110000 0000
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 134 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.....+...++...++.+.+||.+||+.||.+|||+.++++|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 281 LKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAH 322 (383)
T ss_dssp CCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 001111112344567889999999999999999999999986
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-32 Score=264.44 Aligned_cols=174 Identities=21% Similarity=0.296 Sum_probs=140.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. .+..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 472 ~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 549 (656)
T 2j0j_A 472 CTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 549 (656)
T ss_dssp CTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC------
T ss_pred CCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCcceec
Confidence 578999999953 4557999999999999999999999999 9999999999999999999999999998665432
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...+|+.|+|||++.+..++.++|||||||++|||++ |..||.......... .+........+..+++.+.++
T Consensus 550 ~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~-----~i~~~~~~~~~~~~~~~l~~l 624 (656)
T 2j0j_A 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-----RIENGERLPMPPNCPPTLYSL 624 (656)
T ss_dssp ----CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-----HHHHTCCCCCCTTCCHHHHHH
T ss_pred cCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHH-----HHHcCCCCCCCccccHHHHHH
Confidence 2345788999999998899999999999999999997 887876542222111 111111223456678899999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
|.+||..||.+|||+.++++.|+.+..
T Consensus 625 i~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 625 MTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999987653
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=241.19 Aligned_cols=171 Identities=16% Similarity=0.167 Sum_probs=129.4
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------- 75 (357)
+|+|.+.+. .....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 107 ~~~l~~~l~-~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 184 (351)
T 3mi9_A 107 EHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184 (351)
T ss_dssp SEEHHHHHH-CTTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCC
T ss_pred CCCHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccc
Confidence 357777774 24567999999999999999999999999 999999999999999999999999999754321
Q ss_pred -CccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc-------ccccc-----------
Q 018381 76 -KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-------FLMLM----------- 135 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~-------~~~~~----------- 135 (357)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||............ .....
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 264 (351)
T 3mi9_A 185 YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEK 264 (351)
T ss_dssp CCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTS
T ss_pred cCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcc
Confidence 23467999999999876 45799999999999999999999888754222110000 00000
Q ss_pred -ccccCCCCCh-------hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 -DSCLEGHFSN-------DDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 -~~~~~~~~~~-------~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.......... ..++.+.+||.+||+.||.+|||+.++++|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 265 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp SCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0000000000 014668999999999999999999999998
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=8.9e-32 Score=247.19 Aligned_cols=169 Identities=17% Similarity=0.244 Sum_probs=130.8
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------- 75 (357)
+|+|.+++. .+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 113 ~~~L~~~l~---~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 188 (364)
T 3qyz_A 113 ETDLYKLLK---TQHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188 (364)
T ss_dssp SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTT
T ss_pred CcCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccc
Confidence 468888883 457999999999999999999999999 999999999999999999999999999755422
Q ss_pred CccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcc-------cc--------------
Q 018381 76 KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-------LM-------------- 133 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~-------~~-------------- 133 (357)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||............. ..
T Consensus 189 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 268 (364)
T 3qyz_A 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 268 (364)
T ss_dssp CCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHH
T ss_pred cccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHH
Confidence 23478999999998765 457999999999999999999999886542111100000 00
Q ss_pred -ccccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 134 -LMDSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 134 -~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....... .......++.+.+||.+||+.||++|||+.++++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 269 LSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 00112356789999999999999999999999987
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-31 Score=234.93 Aligned_cols=167 Identities=17% Similarity=0.189 Sum_probs=137.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++. ..+.+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 97 ~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (294)
T 2rku_A 97 CRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 173 (294)
T ss_dssp CTTCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCccccc
Confidence 46899999884 3468999999999999999999999999 999999999999999999999999998765422 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++||||||+++|+|++|+.||.......... ..... ....+...++.+.++|.
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~li~ 247 (294)
T 2rku_A 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL----RIKKN--EYSIPKHINPVAASLIQ 247 (294)
T ss_dssp CCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----HHHTT--CCCCCTTSCHHHHHHHH
T ss_pred cccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHhhc--cCCCccccCHHHHHHHH
Confidence 4568999999999998889999999999999999999999887643222111 00011 11234456678999999
Q ss_pred HhccCCCCCCCCHHHHHHHh
Q 018381 157 RCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~l 176 (357)
+||..||++|||+.+++++-
T Consensus 248 ~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 248 KMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp HHTCSSGGGSCCGGGGGGSH
T ss_pred HHcccChhhCcCHHHHhhCh
Confidence 99999999999999999863
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=238.35 Aligned_cols=170 Identities=14% Similarity=0.137 Sum_probs=136.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++|+|.+++.. ....+++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 106 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (314)
T 3com_A 106 CGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 183 (314)
T ss_dssp CTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence 468899999842 4578999999999999999999999999 999999999999999999999999998755432 3
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++||||||+++|+|++|..||.......... ....... .....+...+..+.++|.
T Consensus 184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~l~~li~ 260 (314)
T 3com_A 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-MIPTNPP--PTFRKPELWSDNFTDFVK 260 (314)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCC--CCCSSGGGSCHHHHHHHH
T ss_pred ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhcCCC--cccCCcccCCHHHHHHHH
Confidence 4568999999999998889999999999999999999999886532111100 0000001 111123445788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||..||.+|||+.+++++
T Consensus 261 ~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 261 QCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp HHTCSCTTTSCCHHHHTTS
T ss_pred HHccCChhhCcCHHHHHhC
Confidence 9999999999999999886
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=234.63 Aligned_cols=166 Identities=20% Similarity=0.271 Sum_probs=129.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
+++|+|.+++. ..+.+++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ..
T Consensus 93 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 169 (276)
T 2h6d_A 93 VSGGELFDYIC--KHGRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT 169 (276)
T ss_dssp CCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------
T ss_pred cCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCCcceec
Confidence 46899999995 3467999999999999999999999999 999999999999999999999999998866543 24
Q ss_pred cccCCCCCCccccccCCC-CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
..+|+.|+|||++.+..+ +.++||||||+++|+|++|..||........... .... ....+...+..+.++|.
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~--~~~~~~~~~~~l~~li~ 243 (276)
T 2h6d_A 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK----IRGG--VFYIPEYLNRSVATLLM 243 (276)
T ss_dssp -------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTSCHHHHHHHH
T ss_pred ccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH----hhcC--cccCchhcCHHHHHHHH
Confidence 468999999999987665 6799999999999999999998865432221110 0000 11234456678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||+.||++|||+.+++++
T Consensus 244 ~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 244 HMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHTCSSGGGSCCHHHHHHS
T ss_pred HHccCChhhCCCHHHHHhC
Confidence 9999999999999999987
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=238.84 Aligned_cols=169 Identities=18% Similarity=0.242 Sum_probs=124.4
Q ss_pred CCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---C
Q 018381 3 NETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---K 76 (357)
Q Consensus 3 ~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~ 76 (357)
+|+|.+++.. ..+..+++.+++.++.||+.||.|||++ + ++||||||+||+++.++.+||+|||+++..... .
T Consensus 89 ~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 167 (290)
T 3fme_A 89 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD 167 (290)
T ss_dssp SEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC-------------
T ss_pred ccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCccccccccccc
Confidence 3677777642 2467899999999999999999999998 8 999999999999999999999999998765443 2
Q ss_pred ccccCCCCCCcccc----ccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 SYSTNLAFTPPEYL----RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ~~~gt~~y~aPE~~----~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...||+.|+|||++ .+..++.++|||||||++|+|++|+.||.......... ................++.+.
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 244 (290)
T 3fme_A 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL---KQVVEEPSPQLPADKFSAEFV 244 (290)
T ss_dssp --CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH---HHHHHSCCCCCCTTTSCHHHH
T ss_pred ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHH---HHHhccCCCCcccccCCHHHH
Confidence 34789999999996 45678889999999999999999999986432111111 111111111122335677899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 018381 153 RLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
++|.+||+.||++|||+.++++|
T Consensus 245 ~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 245 DFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHhhcChhhCcCHHHHHhC
Confidence 99999999999999999999885
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=239.11 Aligned_cols=168 Identities=21% Similarity=0.307 Sum_probs=131.0
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC------
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------ 75 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------ 75 (357)
.+|+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+||+++ ++.+||+|||+++.....
T Consensus 110 ~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~~~ 185 (313)
T 3cek_A 110 GNIDLNSWLK--KKKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVK 185 (313)
T ss_dssp CSEEHHHHHH--HCSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCC----------
T ss_pred CCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEE-CCeEEEeeccccccccCccccccc
Confidence 5789999995 3568999999999999999999999999 99999999999996 589999999999865432
Q ss_pred CccccCCCCCCcccccc-----------CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCC
Q 018381 76 KSYSTNLAFTPPEYLRT-----------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 144 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (357)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ .............++
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~ 262 (313)
T 3cek_A 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEIEFP 262 (313)
T ss_dssp ----CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCTTSCCCCC
T ss_pred cCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH---HHHHHHhcccccCCc
Confidence 23468999999999875 4678899999999999999999998865321111 111122222223344
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 145 NDDGTELVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 145 ~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
...+..+.++|.+||..||.+|||+.+++++-
T Consensus 263 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 263 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 45567899999999999999999999999873
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=242.25 Aligned_cols=172 Identities=16% Similarity=0.264 Sum_probs=129.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
+++++|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 106 ~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (331)
T 4aaa_A 106 VDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182 (331)
T ss_dssp CSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred CCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCCccccC
Confidence 45778887764 4567999999999999999999999999 999999999999999999999999999754432 3
Q ss_pred ccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhc-------------------Cc-ccccc
Q 018381 77 SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------------------KN-FLMLM 135 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-------------------~~-~~~~~ 135 (357)
...||+.|+|||++.+. .++.++|||||||++|+|++|+.||.......... .. .....
T Consensus 183 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (331)
T 4aaa_A 183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262 (331)
T ss_dssp -CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCC
T ss_pred CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccccc
Confidence 45689999999999875 67899999999999999999999887542211000 00 00000
Q ss_pred ccccCCC-----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 DSCLEGH-----FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 ~~~~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+..... ..+.+++.+.+||.+||+.||.+|||+.++++|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 263 LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000 112457889999999999999999999999986
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-31 Score=244.20 Aligned_cols=168 Identities=14% Similarity=0.180 Sum_probs=123.4
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 113 ~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 187 (371)
T 2xrw_A 113 DANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 187 (371)
T ss_dssp SEEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC--------------
T ss_pred CCCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeecccccccccccCCce
Confidence 357777773 35999999999999999999999999 999999999999999999999999999865543 3457
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccc--------------------------
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM-------------------------- 133 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-------------------------- 133 (357)
||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.............
T Consensus 188 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (371)
T 2xrw_A 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY 267 (371)
T ss_dssp --CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCC
T ss_pred ecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccc
Confidence 899999999999988999999999999999999999998754221100000000
Q ss_pred -------ccccccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 134 -------LMDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 134 -------~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
......... .....+..+.+||.+||+.||.+|||+.++++|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 268 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp CCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000000 011236789999999999999999999999997
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-31 Score=235.69 Aligned_cols=169 Identities=21% Similarity=0.275 Sum_probs=129.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++.. .+..+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 174 (303)
T 1zy4_A 97 CENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174 (303)
T ss_dssp CCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCCCSCTTC------
T ss_pred CCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhc
Confidence 468999999953 4567899999999999999999999999 999999999999999999999999998755321
Q ss_pred -------------CccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCC
Q 018381 76 -------------KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 141 (357)
Q Consensus 76 -------------~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
....||+.|+|||++.+. .++.++|||||||++|+|++ |+....... ............+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~-~~~~~~~~~~~~~~~ 250 (303)
T 1zy4_A 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV-NILKKLRSVSIEFPP 250 (303)
T ss_dssp -------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH-HHHHHHHSTTCCCCT
T ss_pred cccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHH-HHHHhccccccccCc
Confidence 234688999999999864 68899999999999999998 343221111 000001111122233
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 142 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 142 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.++...++.+.++|.+||..||++|||+.+++++
T Consensus 251 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 251 DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 3455667889999999999999999999999997
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-31 Score=252.07 Aligned_cols=169 Identities=16% Similarity=0.162 Sum_probs=134.4
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC---CCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~-- 75 (357)
++||+|.+++. ....+++.+++.++.||+.||.|||+++ |+||||||+|||++.. +.+||+|||+++.....
T Consensus 118 ~~~g~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 118 YKGGELFDEII--HRMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 57899999985 4567999999999999999999999999 9999999999999764 45999999999865543
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....||+.|+|||++. +.++.++|||||||++|+|++|..||............... ...+..+....+++.+.++
T Consensus 195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~l 271 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKG--KYTFDSPEWKNVSEGAKDL 271 (494)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCCSGGGTTSCHHHHHH
T ss_pred ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCchhcccCCHHHHHH
Confidence 3457999999999986 57899999999999999999999998765332221110000 0001111112456789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
|.+||+.||.+|||+.++++|
T Consensus 272 i~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 272 IKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHCCCChhhCccHHHHhcC
Confidence 999999999999999999986
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=236.57 Aligned_cols=171 Identities=16% Similarity=0.216 Sum_probs=135.1
Q ss_pred CCCCchhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-CCCeEEecCCcccccCC----
Q 018381 1 MPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRD---- 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~---- 74 (357)
+++|+|.+++.... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++. ++.+||+|||+++....
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 179 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCc
Confidence 46899999996432 346789999999999999999999999 999999999999987 89999999999976543
Q ss_pred CCccccCCCCCCccccccCC--CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 75 GKSYSTNLAFTPPEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 75 ~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
.....||+.|+|||++.++. ++.++||||||+++|+|++|+.||......... .............+..+++.+.
T Consensus 180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 256 (295)
T 2clq_A 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA---MFKVGMFKVHPEIPESMSAEAK 256 (295)
T ss_dssp -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH---HHHHHHHCCCCCCCTTSCHHHH
T ss_pred ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH---HHhhccccccccccccCCHHHH
Confidence 23457899999999997643 788999999999999999999887543111100 0000011122234556778999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 018381 153 RLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
++|.+||..||++|||+.+++.+
T Consensus 257 ~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 257 AFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHccCChhhCCCHHHHhcC
Confidence 99999999999999999999986
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=241.04 Aligned_cols=170 Identities=18% Similarity=0.220 Sum_probs=125.8
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC-----CCCCeEEecCCcccccCCC--
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-----QDGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~-----~~~~~kl~Dfg~~~~~~~~-- 75 (357)
+|+|.+++. ....+++.+++.++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 116 ~~~L~~~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 192 (329)
T 3gbz_A 116 ENDLKKYMD--KNPDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR 192 (329)
T ss_dssp SEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC----
T ss_pred CCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc
Confidence 368999985 4557999999999999999999999999 99999999999994 4556999999999755422
Q ss_pred --CccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccc-------------------
Q 018381 76 --KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM------------------- 133 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~------------------- 133 (357)
....||+.|+|||++.+. .++.++|||||||++|+|++|..||...............
T Consensus 193 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (329)
T 3gbz_A 193 QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWK 272 (329)
T ss_dssp -------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhh
Confidence 344679999999999874 4799999999999999999999988754221110000000
Q ss_pred -cc----ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 134 -LM----DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 134 -~~----~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.. ........+...++++.+||.+||+.||.+|||+.++++|
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 273 QSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 00 0000000111246789999999999999999999999987
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=233.36 Aligned_cols=165 Identities=18% Similarity=0.212 Sum_probs=132.7
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC------Cc
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------KS 77 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~ 77 (357)
|+|.+++.......+++.+++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 92 ~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 170 (305)
T 2wtk_C 92 CGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170 (305)
T ss_dssp EEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECC
T ss_pred CCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeeccccccccCcccccccccc
Confidence 34777775555678999999999999999999999999 999999999999999999999999998765421 23
Q ss_pred cccCCCCCCccccccCCC--CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRV--IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~--~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
..||+.|+|||++.+... +.++||||||+++|+|++|+.||........... .... ....+..+++.+.++|
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----i~~~--~~~~~~~~~~~l~~li 244 (305)
T 2wtk_C 171 SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFEN----IGKG--SYAIPGDCGPPLSDLL 244 (305)
T ss_dssp CCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHHC--CCCCCSSSCHHHHHHH
T ss_pred CCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH----HhcC--CCCCCCccCHHHHHHH
Confidence 468999999999976443 7799999999999999999999876432221110 0001 1123445678899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 018381 156 SRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+||..||.+|||+.+++++
T Consensus 245 ~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 245 KGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHHTCSSTTTSCCHHHHHHS
T ss_pred HHHccCChhhCCCHHHHhcC
Confidence 99999999999999999987
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-31 Score=236.92 Aligned_cols=162 Identities=23% Similarity=0.385 Sum_probs=135.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC-CCCCeEEecCCcccccCCC--Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG--KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~--~~ 77 (357)
+++|+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+||+++ .++.+||+|||+++..... ..
T Consensus 121 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~ 197 (312)
T 2iwi_A 121 LPAQDLFDYIT--EKGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTD 197 (312)
T ss_dssp SSEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCC
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcccc
Confidence 36789999995 3567999999999999999999999999 99999999999998 8899999999998865543 34
Q ss_pred cccCCCCCCccccccCCCC-ccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
..||+.|+|||++.+..+. .++|||||||++|+|++|+.||..... ... . ...++..++..+.++|.
T Consensus 198 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~-~----------~~~~~~~~~~~~~~li~ 265 (312)
T 2iwi_A 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-ILE-A----------ELHFPAHVSPDCCALIR 265 (312)
T ss_dssp CCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-HHH-T----------CCCCCTTSCHHHHHHHH
T ss_pred cCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-Hhh-h----------ccCCcccCCHHHHHHHH
Confidence 5689999999999876664 589999999999999999988765321 111 1 11234556788999999
Q ss_pred HhccCCCCCCCCHHHHHHHhC
Q 018381 157 RCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~l~ 177 (357)
+||..||++|||+.+++++-.
T Consensus 266 ~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 266 RCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp HHTCSSTTTSCCHHHHHHSTT
T ss_pred HHccCChhhCcCHHHHhcChh
Confidence 999999999999999999743
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=240.81 Aligned_cols=168 Identities=18% Similarity=0.202 Sum_probs=132.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC---eEEecCCcccccCCCC-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~~~~~~~~~- 76 (357)
+++|+|.+++. ....+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+++......
T Consensus 96 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 172 (322)
T 2ycf_A 96 MEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172 (322)
T ss_dssp CTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHH
T ss_pred CCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCccceecccccc
Confidence 46899999994 5678999999999999999999999999 999999999999987664 9999999998765442
Q ss_pred --ccccCCCCCCccccc---cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccccccc-cc--CCCCChhhH
Q 018381 77 --SYSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS-CL--EGHFSNDDG 148 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~ 148 (357)
...||+.|+|||++. +..++.++|||||||++|+|++|..||...... ......+.. .. ........+
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 248 (322)
T 2ycf_A 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKDQITSGKYNFIPEVWAEVS 248 (322)
T ss_dssp HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS----SCHHHHHHHTCCCCCHHHHTTSC
T ss_pred cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH----HHHHHHHHhCccccCchhhhhcC
Confidence 346899999999974 466789999999999999999999988643111 000000000 00 000112356
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 149 TELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 149 ~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.+.++|.+||..||++|||+.+++++
T Consensus 249 ~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 249 EKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 789999999999999999999999986
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=245.27 Aligned_cols=161 Identities=21% Similarity=0.257 Sum_probs=127.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC-CCCCeEEecCCcccccCC---CCccccCCCCCCccc
Q 018381 14 ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRD---GKSYSTNLAFTPPEY 89 (357)
Q Consensus 14 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~~---~~~~~gt~~y~aPE~ 89 (357)
.+..+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++.... .....||+.|+|||+
T Consensus 134 ~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~ 212 (394)
T 4e7w_A 134 LKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPEL 212 (394)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHH
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHH
Confidence 3678999999999999999999999999 99999999999998 799999999999986543 235678999999999
Q ss_pred cccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhc-----------------------CccccccccccCCCCCh
Q 018381 90 LRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-----------------------KNFLMLMDSCLEGHFSN 145 (357)
Q Consensus 90 ~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~ 145 (357)
+.+. .++.++|||||||++|||++|+.||.+........ ..+.......+...++.
T Consensus 213 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (394)
T 4e7w_A 213 IFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRP 292 (394)
T ss_dssp HTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCT
T ss_pred HcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccc
Confidence 8764 58999999999999999999999987642111000 00000000111111233
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..++++.+||.+||+.||.+|||+.++++|
T Consensus 293 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 293 RTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp TCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 467889999999999999999999999987
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=240.18 Aligned_cols=158 Identities=24% Similarity=0.401 Sum_probs=132.4
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC-CCCCeEEecCCcccccCCC--Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG--KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~--~~~~ 79 (357)
+|+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++..... ....
T Consensus 133 ~~~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~ 209 (320)
T 3a99_A 133 VQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 209 (320)
T ss_dssp EEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCC
T ss_pred CccHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCC
Confidence 389999995 3568999999999999999999999999 99999999999998 7889999999999865543 3457
Q ss_pred cCCCCCCccccccCCC-CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 80 TNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
||+.|+|||++.+..+ +.++|||||||++|+|++|+.||..... ..... ..++..+++.+.++|.+|
T Consensus 210 gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~~-----------~~~~~~~~~~~~~li~~~ 277 (320)
T 3a99_A 210 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-IIRGQ-----------VFFRQRVSSECQHLIRWC 277 (320)
T ss_dssp SCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-HHHCC-----------CCCSSCCCHHHHHHHHHH
T ss_pred CCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-hhccc-----------ccccccCCHHHHHHHHHH
Confidence 8999999999987666 6789999999999999999988865321 11111 112344567899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 018381 159 LQYEPRERPNAKSLVAS 175 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~ 175 (357)
|..||++|||+.+++++
T Consensus 278 l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 278 LALRPSDRPTFEEIQNH 294 (320)
T ss_dssp TCSSGGGSCCHHHHHTS
T ss_pred ccCChhhCcCHHHHhcC
Confidence 99999999999999986
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=238.11 Aligned_cols=170 Identities=16% Similarity=0.189 Sum_probs=132.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCccccc----CCCC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS----RDGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~----~~~~ 76 (357)
+++|+|.+++.. ....+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++... ....
T Consensus 98 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (302)
T 2j7t_A 98 CPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD 175 (302)
T ss_dssp CTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred CCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence 478999999853 3567999999999999999999999999 999999999999999999999999987532 2234
Q ss_pred ccccCCCCCCccccc-----cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 77 SYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
...||+.|+|||++. +..++.++||||||+++|+|++|..|+........... .... .......+..++..+
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~l 252 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK-IAKS--DPPTLLTPSKWSVEF 252 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHS--CCCCCSSGGGSCHHH
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH-Hhcc--CCcccCCccccCHHH
Confidence 557899999999983 56788999999999999999999988765422111100 0000 001112244567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 018381 152 VRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.++|.+||..||++|||+.++++|
T Consensus 253 ~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 253 RDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp HHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred HHHHHHHcccChhhCCCHHHHhcC
Confidence 999999999999999999999886
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-31 Score=234.76 Aligned_cols=170 Identities=20% Similarity=0.187 Sum_probs=135.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
+++|+|.+++. .+..+++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ..
T Consensus 106 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 182 (298)
T 1phk_A 106 MKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 182 (298)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCC
T ss_pred cCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecccchhhcCCCccccc
Confidence 46899999995 3568999999999999999999999999 999999999999999999999999998865443 24
Q ss_pred cccCCCCCCccccc------cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 78 YSTNLAFTPPEYLR------TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 78 ~~gt~~y~aPE~~~------~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
..||+.|+|||++. ...++.++||||||+++|+|++|..||............... ......+.....+..+
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l 260 (298)
T 1phk_A 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG--NYQFGSPEWDDYSDTV 260 (298)
T ss_dssp CCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCCTTTGGGSCHHH
T ss_pred ccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcC--CcccCcccccccCHHH
Confidence 56899999999985 456788999999999999999999988654322211110000 0011111223567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 018381 152 VRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.++|.+||..||.+|||+.+++++
T Consensus 261 ~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 261 KDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHccCCcccCCCHHHHHhC
Confidence 999999999999999999999986
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-31 Score=238.65 Aligned_cols=174 Identities=20% Similarity=0.214 Sum_probs=134.9
Q ss_pred CCCCchhhh------hccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeecCCCCCeeeCCCCCeEEecCCcccccC
Q 018381 1 MPNETLSKH------LFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 73 (357)
Q Consensus 1 ~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 73 (357)
+++|+|.++ +.......+++..++.++.||+.||.|||+ .+ ++||||||+||+++.++.+||+|||++....
T Consensus 125 ~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 203 (348)
T 2pml_X 125 MENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKNGRVKLSDFGESEYMV 203 (348)
T ss_dssp CTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEEECTTSCEEECCCTTCEECB
T ss_pred cCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEEEcCCCcEEEeccccccccc
Confidence 468899999 643336889999999999999999999999 88 9999999999999999999999999998654
Q ss_pred CC--CccccCCCCCCccccccC-CCCc-cccccchHHHHHHHHhCCCCCCcchh--H---hhhcCccccccc--cc----
Q 018381 74 DG--KSYSTNLAFTPPEYLRTG-RVIP-ESVVYSFGTLLLDLLSGKHIPPSHAL--D---LIRGKNFLMLMD--SC---- 138 (357)
Q Consensus 74 ~~--~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~slG~~l~el~~g~~~~~~~~~--~---~~~~~~~~~~~~--~~---- 138 (357)
.. ....||+.|+|||++.+. .++. ++|||||||++|+|++|..||..... . .+.......... ..
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 283 (348)
T 2pml_X 204 DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPL 283 (348)
T ss_dssp TTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTT
T ss_pred cccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccc
Confidence 33 345789999999999876 5666 99999999999999999998865422 1 111110000000 00
Q ss_pred ---cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 139 ---LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 139 ---~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.........+..+.++|.+||..||.+|||+.++++|
T Consensus 284 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 284 TNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp CC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000114567889999999999999999999999987
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-31 Score=252.56 Aligned_cols=167 Identities=16% Similarity=0.161 Sum_probs=135.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC---CeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~-- 75 (357)
++||+|.+++. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 128 ~~gg~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 204 (504)
T 3q5i_A 128 YEGGELFEQII--NRHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK 204 (504)
T ss_dssp CTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCc
Confidence 57899999995 4567999999999999999999999999 99999999999998776 6999999999866543
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCC--CChhhHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH--FSNDDGTELV 152 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 152 (357)
....||+.|+|||++. +.++.++|||||||++|+|++|..||........... +........ ....+++.+.
T Consensus 205 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~s~~~~ 279 (504)
T 3q5i_A 205 LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKK----VEKGKYYFDFNDWKNISDEAK 279 (504)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHCCCCCCHHHHTTSCHHHH
T ss_pred cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHcCCCCCCccccCCCCHHHH
Confidence 3457899999999987 5789999999999999999999999876533222111 000101000 0123567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 018381 153 RLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+||.+||+.||.+|||+.++++|
T Consensus 280 ~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 280 ELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcCCChhHCCCHHHHhcC
Confidence 99999999999999999999987
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=238.84 Aligned_cols=171 Identities=18% Similarity=0.232 Sum_probs=115.3
Q ss_pred Cchhhhhc---cCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC---
Q 018381 4 ETLSKHLF---HWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 76 (357)
Q Consensus 4 gsL~~~l~---~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 76 (357)
|+|.+++. ......+++..+..++.|++.||.|||+. + ++||||||+||+++.++.+||+|||+++......
T Consensus 105 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 183 (327)
T 3aln_A 105 TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKT 183 (327)
T ss_dssp EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC--------
T ss_pred CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceecccccccc
Confidence 56766663 12367899999999999999999999998 8 9999999999999999999999999997654332
Q ss_pred ccccCCCCCCcccc----ccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 SYSTNLAFTPPEYL----RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ~~~gt~~y~aPE~~----~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...||+.|+|||++ .+..++.++|||||||++|+|++|+.||....................+.......+++.+.
T Consensus 184 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 263 (327)
T 3aln_A 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFI 263 (327)
T ss_dssp ----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHH
T ss_pred cCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHH
Confidence 33689999999998 45668899999999999999999999886532111111111111111122222234678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 018381 153 RLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
++|.+||..||.+|||+.+++++
T Consensus 264 ~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 264 NFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp HHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHhhCChhhCcCHHHHHhC
Confidence 99999999999999999999886
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-31 Score=240.43 Aligned_cols=169 Identities=16% Similarity=0.183 Sum_probs=130.5
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------- 75 (357)
+|+|.+++. .+.+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 97 ~~~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 172 (353)
T 2b9h_A 97 QTDLHRVIS---TQMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172 (353)
T ss_dssp SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC---------
T ss_pred CccHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEecccccccccccccccCc
Confidence 468888884 467999999999999999999999999 999999999999999999999999998755421
Q ss_pred -------CccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC--------c---c-----
Q 018381 76 -------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------N---F----- 131 (357)
Q Consensus 76 -------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~--------~---~----- 131 (357)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........... . .
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (353)
T 2b9h_A 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIE 252 (353)
T ss_dssp -------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCC
T ss_pred cccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccc
Confidence 12467999999998765 6788999999999999999999998876432110000 0 0
Q ss_pred ----ccccccc---cC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 132 ----LMLMDSC---LE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 132 ----~~~~~~~---~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....... .. ......+++.+.++|.+||..||++|||+.++++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 253 SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 00 00112456789999999999999999999999986
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-30 Score=240.15 Aligned_cols=167 Identities=14% Similarity=0.204 Sum_probs=127.1
Q ss_pred CchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-CccccCC
Q 018381 4 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTNL 82 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt~ 82 (357)
|+|.+++ +..+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....||+
T Consensus 131 ~~l~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t~ 205 (371)
T 4exu_A 131 TDLQKIM----GMEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR 205 (371)
T ss_dssp EEHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC--------CTTCCC
T ss_pred ccHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccCc
Confidence 5777776 345999999999999999999999999 999999999999999999999999999865543 3567899
Q ss_pred CCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccc----------------------ccccccc
Q 018381 83 AFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL----------------------MLMDSCL 139 (357)
Q Consensus 83 ~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~----------------------~~~~~~~ 139 (357)
.|+|||++.+ ..++.++|||||||++|+|++|+.||.............. .......
T Consensus 206 ~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (371)
T 4exu_A 206 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP 285 (371)
T ss_dssp TTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCC
T ss_pred cccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCc
Confidence 9999999987 6789999999999999999999999875421111000000 0000000
Q ss_pred CC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 140 EG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 140 ~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.. ......++.+.+||.+||+.||++|||+.++++|
T Consensus 286 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 286 RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred chhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00 0112356789999999999999999999999987
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.3e-31 Score=244.93 Aligned_cols=173 Identities=13% Similarity=0.204 Sum_probs=122.1
Q ss_pred CCchhhhhcc-------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeee----CCCCCeEEecCCcccc
Q 018381 3 NETLSKHLFH-------WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKN 71 (357)
Q Consensus 3 ~gsL~~~l~~-------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~~~~ 71 (357)
+|+|.+++.. .....+++..++.++.||+.||.|||+.+ |+||||||+|||| +.++.+||+|||+++.
T Consensus 103 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 181 (405)
T 3rgf_A 103 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARL 181 (405)
T ss_dssp SEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-
T ss_pred CCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECCCcee
Confidence 4577776641 12235999999999999999999999999 9999999999999 6778999999999986
Q ss_pred cCCC-------CccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC--------------
Q 018381 72 SRDG-------KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-------------- 129 (357)
Q Consensus 72 ~~~~-------~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-------------- 129 (357)
.... ....||+.|+|||++.+. .++.++|||||||++|+|++|+.||.....+.....
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~ 261 (405)
T 3rgf_A 182 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 261 (405)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHH
T ss_pred cCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhh
Confidence 5432 245789999999999874 489999999999999999999998864321100000
Q ss_pred ------ccccc-------------cccccCC--------CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 018381 130 ------NFLML-------------MDSCLEG--------HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 130 ------~~~~~-------------~~~~~~~--------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l 176 (357)
.+... ....... ......++.+.+||.+||+.||.+|||+.++++|-
T Consensus 262 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp 335 (405)
T 3rgf_A 262 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDP 335 (405)
T ss_dssp CCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred CCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 00000 0000000 00011256789999999999999999999999983
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-31 Score=241.74 Aligned_cols=171 Identities=13% Similarity=0.172 Sum_probs=126.7
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++. ..+..+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 117 ~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 194 (362)
T 3pg1_A 117 RTDLAQVIH-DQRIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYV 194 (362)
T ss_dssp SEEHHHHHH-CTTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCTTC--------------
T ss_pred CCCHHHHHH-hcccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHHEEEcCCCCEEEEecCcccccccccccceec
Confidence 478888885 35568999999999999999999999999 999999999999999999999999999754432 3456
Q ss_pred cCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcc-------------------cccccccc
Q 018381 80 TNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-------------------LMLMDSCL 139 (357)
Q Consensus 80 gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~-------------------~~~~~~~~ 139 (357)
||+.|+|||++.+ ..++.++|||||||++|+|++|+.||............. ........
T Consensus 195 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (362)
T 3pg1_A 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSL 274 (362)
T ss_dssp -CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCC
T ss_pred ccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhc
Confidence 8999999999877 678999999999999999999999987642111100000 00000000
Q ss_pred C-------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 140 E-------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 140 ~-------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
. .......++.+.+||.+||+.||.+|||+.++++|
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 275 SNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0 01122346789999999999999999999999987
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-30 Score=235.99 Aligned_cols=168 Identities=14% Similarity=0.219 Sum_probs=128.3
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-CccccC
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt 81 (357)
+|+|.+++ +..+++.++..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....+|
T Consensus 112 ~~~l~~~~----~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t 186 (353)
T 3coi_A 112 QTDLQKIM----GLKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVT 186 (353)
T ss_dssp SEEGGGTT----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC--------CCS
T ss_pred cCCHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccCCCCCccccccC
Confidence 35777776 235999999999999999999999999 999999999999999999999999999865433 345789
Q ss_pred CCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc----------------------cccccccc
Q 018381 82 LAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN----------------------FLMLMDSC 138 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~----------------------~~~~~~~~ 138 (357)
+.|+|||++.+ ..++.++|||||||++|+|++|+.||............ +.......
T Consensus 187 ~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
T 3coi_A 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT 266 (353)
T ss_dssp BCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBC
T ss_pred cCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCC
Confidence 99999999887 67889999999999999999999988654211100000 00000000
Q ss_pred cC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 139 LE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 139 ~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.. .......++.+.++|.+||..||++|||+.++++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 267 PRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp SSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 01 11233567889999999999999999999999987
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-30 Score=236.52 Aligned_cols=161 Identities=19% Similarity=0.208 Sum_probs=126.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHh--cCCCceeecCCCCCeeeCC-CCCeEEecCCcccccCCC---CccccCCCCCCc
Q 018381 14 ENQPMKWAMRVRVALYLAQALDYCS--SKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG---KSYSTNLAFTPP 87 (357)
Q Consensus 14 ~~~~l~~~~~~~i~~~i~~~l~~lH--~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aP 87 (357)
....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+||+|||+++..... ....||+.|+||
T Consensus 122 ~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP 200 (360)
T 3e3p_A 122 RQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAP 200 (360)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCH
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccccCCcceeCH
Confidence 5678999999999999999999999 898 999999999999996 899999999999865543 345689999999
Q ss_pred cccccCC-CCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccc--------------------cccc------cccC
Q 018381 88 EYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL--------------------MLMD------SCLE 140 (357)
Q Consensus 88 E~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~--------------------~~~~------~~~~ 140 (357)
|++.+.. ++.++|||||||++|+|++|+.||.............. .... ....
T Consensus 201 E~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (360)
T 3e3p_A 201 ELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVF 280 (360)
T ss_dssp HHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHT
T ss_pred HHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCccccc
Confidence 9987644 79999999999999999999998876422111100000 0000 0001
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 141 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 141 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...+...++.+.+||.+||+.||.+|||+.++++|
T Consensus 281 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 281 SDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp TTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred chhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11223367889999999999999999999999987
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-30 Score=241.93 Aligned_cols=168 Identities=18% Similarity=0.157 Sum_probs=123.7
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-----CCCeEEecCCcccccCCC--
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-----DGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-----~~~~kl~Dfg~~~~~~~~-- 75 (357)
+|+|.+++.. ....+++.+++.++.||+.||.|||+.+ |+||||||+|||++. ...+||+|||+++.....
T Consensus 101 ~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 101 AATLQEYVEQ-KDFAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp SEEHHHHHHS-SSCCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred CCCHHHHHHh-cCCCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 5799999953 4455666678899999999999999999 999999999999953 235789999999865432
Q ss_pred -----CccccCCCCCCccccc---cCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChh
Q 018381 76 -----KSYSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 146 (357)
Q Consensus 76 -----~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (357)
....||+.|+|||++. +..++.++|||||||++|||++ |..||........... ..... .........
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~--~~~~~-~~~~~~~~~ 255 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL--LGACS-LDCLHPEKH 255 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH--TTCCC-CTTSCTTCH
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH--hccCC-ccccCcccc
Confidence 2356899999999997 3567789999999999999999 7767643322111110 00000 001112334
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 147 DGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 147 ~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+..+.+||.+||+.||.+|||+.++++|
T Consensus 256 ~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 256 EDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 56778999999999999999999999986
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-30 Score=243.90 Aligned_cols=170 Identities=20% Similarity=0.178 Sum_probs=122.8
Q ss_pred CCchhhhhccCCCC-----CCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC-------------CCeEEe
Q 018381 3 NETLSKHLFHWENQ-----PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-------------GNPRLS 64 (357)
Q Consensus 3 ~gsL~~~l~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~-------------~~~kl~ 64 (357)
+|+|.+++...... ..++..++.++.||+.||.|||+.+ |+||||||+|||++.+ +.+||+
T Consensus 92 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 92 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 57999999532211 1134456789999999999999999 9999999999999654 479999
Q ss_pred cCCcccccCCCC--------ccccCCCCCCcccccc-------CCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhc
Q 018381 65 CFGLMKNSRDGK--------SYSTNLAFTPPEYLRT-------GRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRG 128 (357)
Q Consensus 65 Dfg~~~~~~~~~--------~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~ 128 (357)
|||+++...... ...||+.|+|||++.+ ..++.++|||||||++|||++ |..||..........
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i 250 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 250 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHH
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHH
Confidence 999998654422 3468999999999975 567899999999999999999 887775432211100
Q ss_pred Ccccccc-ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 129 KNFLMLM-DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 129 ~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..... ............++++.++|.+||+.||.+|||+.++++|
T Consensus 251 --~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 251 --IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp --HHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --hcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 00000 0111112244678899999999999999999999999986
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-30 Score=234.05 Aligned_cols=169 Identities=16% Similarity=0.202 Sum_probs=129.6
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC-CCCCeEEecCCcccccCCC------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG------ 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~------ 75 (357)
+|+|.+++ ..+.+++..++.++.||+.||.|||+.+ |+||||||+||+++ .++.+||+|||+++.....
T Consensus 105 ~~~L~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 180 (320)
T 2i6l_A 105 ETDLANVL---EQGPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGH 180 (320)
T ss_dssp SEEHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------C
T ss_pred CCCHHHHh---hcCCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccc
Confidence 36899998 4578999999999999999999999999 99999999999997 5678999999999865321
Q ss_pred -CccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccc------------------ccc
Q 018381 76 -KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL------------------MLM 135 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~------------------~~~ 135 (357)
....+|..|+|||++.+ ..++.++|||||||++|+|++|+.||.............. ...
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (320)
T 2i6l_A 181 LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYI 260 (320)
T ss_dssp CCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHH
T ss_pred cccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccc
Confidence 23456899999998865 6788999999999999999999998875422111000000 000
Q ss_pred ccccC-C-----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 DSCLE-G-----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 ~~~~~-~-----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..... . .....++..+.++|.+||+.||.+|||+.++++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 261 RNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00000 0 0112457889999999999999999999999986
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-30 Score=228.49 Aligned_cols=167 Identities=17% Similarity=0.160 Sum_probs=132.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC---CCeEEecCCcccccCCCC-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~- 76 (357)
+++|+|.+++. ..+.+++.+++.++.||+.||.|||+.+ ++||||||+||+++.+ +.+||+|||++.......
T Consensus 103 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~ 179 (287)
T 2wei_A 103 YTGGELFDEII--KRKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (287)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS
T ss_pred cCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc
Confidence 46899999885 3457999999999999999999999999 9999999999999754 469999999988655432
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCC--CCChhhHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--HFSNDDGTELV 152 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 152 (357)
...+|+.|+|||++.+ .++.++||||||+++|+|++|..||........... ........ +....+++.+.
T Consensus 180 ~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 254 (287)
T 2wei_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR----VETGKYAFDLPQWRTISDDAK 254 (287)
T ss_dssp CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHCCCCCCSGGGTTSCHHHH
T ss_pred cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHH----HHcCCCCCCchhhhhcCHHHH
Confidence 3457899999999875 588999999999999999999998876432221110 00011110 11124567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 018381 153 RLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
++|.+||..||.+|||+.+++++
T Consensus 255 ~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 255 DLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHcccChhhCcCHHHHhcC
Confidence 99999999999999999999986
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=245.73 Aligned_cols=172 Identities=19% Similarity=0.188 Sum_probs=131.9
Q ss_pred CCCCchhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCC---eEEecCCcccccCCC-
Q 018381 1 MPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~~~~~~~~- 75 (357)
++||+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+||+++.++. +||+|||+++.....
T Consensus 100 ~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~ 178 (676)
T 3qa8_A 100 CEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE 178 (676)
T ss_dssp CSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC
T ss_pred CCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEccccccccccccc
Confidence 47899999996422 347999999999999999999999999 999999999999997765 899999999865543
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhh-hc---------Ccccccc--------
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-RG---------KNFLMLM-------- 135 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-~~---------~~~~~~~-------- 135 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||........ .. .......
T Consensus 179 ~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~ 258 (676)
T 3qa8_A 179 LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSS 258 (676)
T ss_dssp CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCS
T ss_pred ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhcccccccc
Confidence 345789999999999999999999999999999999999999865311110 00 0000000
Q ss_pred ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHH
Q 018381 136 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 173 (357)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~ 173 (357)
............++.+.++|.+||..||++|||+.+++
T Consensus 259 ~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 259 VLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp SSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred ccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 00111223456789999999999999999999997754
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-30 Score=231.58 Aligned_cols=159 Identities=21% Similarity=0.284 Sum_probs=117.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---CccccCCCCCCccc
Q 018381 14 ENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYSTNLAFTPPEY 89 (357)
Q Consensus 14 ~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~ 89 (357)
....+++..++.++.||+.||.|||++ + ++||||||+||+++.++.+||+|||+++..... ....||+.|+|||+
T Consensus 117 ~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~ 195 (318)
T 2dyl_A 117 MQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPER 195 (318)
T ss_dssp HTSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC--------------CCTTCCHHH
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccccCCCccccChhh
Confidence 357899999999999999999999996 8 999999999999999999999999998755433 24468999999999
Q ss_pred cc-----cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccCCCC
Q 018381 90 LR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 164 (357)
Q Consensus 90 ~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~ 164 (357)
+. +..++.++|||||||++|+|++|+.||..................... .....+++.+.++|.+||..||.
T Consensus 196 ~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~ 273 (318)
T 2dyl_A 196 IDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL--PGHMGFSGDFQSFVKDCLTKDHR 273 (318)
T ss_dssp HC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCC--CSSSCCCHHHHHHHHHHTCSCTT
T ss_pred cccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCC--CccCCCCHHHHHHHHHHccCChh
Confidence 94 456788999999999999999999888653211100000001001111 11224567899999999999999
Q ss_pred CCCCHHHHHHH
Q 018381 165 ERPNAKSLVAS 175 (357)
Q Consensus 165 ~Rps~~~v~~~ 175 (357)
+|||+.+++++
T Consensus 274 ~Rps~~~ll~h 284 (318)
T 2dyl_A 274 KRPKYNKLLEH 284 (318)
T ss_dssp TSCCHHHHTTS
T ss_pred HCcCHHHHhhC
Confidence 99999999886
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=225.18 Aligned_cols=155 Identities=16% Similarity=0.173 Sum_probs=120.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC---CCCeEEecCCcccccCCCCc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDGKS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~~ 77 (357)
++||+|.+++.......+++.+++.++.||+.||.|||+.+ |+||||||+||+++. ++.+||+|||++....
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---- 171 (299)
T 3m2w_A 97 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---- 171 (299)
T ss_dssp CCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT----
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEeccccccccc----
Confidence 46899999997655668999999999999999999999999 999999999999998 7889999999976433
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCC----hhhHHHHHH
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS----NDDGTELVR 153 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 153 (357)
+..++.++|||||||++|+|++|..||..................... ..+ ..+++.+.+
T Consensus 172 --------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 235 (299)
T 3m2w_A 172 --------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY--EFPNPEWSEVSEEVKM 235 (299)
T ss_dssp --------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCC--SSCHHHHTTSCHHHHH
T ss_pred --------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccc--cCCchhcccCCHHHHH
Confidence 245778999999999999999999998654322211111111111111 112 245788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 018381 154 LASRCLQYEPRERPNAKSLVASL 176 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l 176 (357)
+|.+||..||.+|||+.++++|-
T Consensus 236 li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 236 LIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp HHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHHHcccChhhCCCHHHHhcCh
Confidence 99999999999999999999873
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.9e-28 Score=219.28 Aligned_cols=164 Identities=10% Similarity=0.004 Sum_probs=124.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCceeecCCCCCeeeCCCC--------------------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS-SKGRALYHDLNTYRILFDQDG-------------------- 59 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH-~~~~iiH~dlkp~Nill~~~~-------------------- 59 (357)
+++|+|.+.+ .++.+++.++..++.||+.||.||| +.+ |+||||||+|||++.++
T Consensus 144 ~~~g~ll~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 2vuw_A 144 EFGGIDLEQM---RTKLSSLATAKSILHQLTASLAVAEASLR-FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGL 219 (336)
T ss_dssp ECCCEETGGG---TTTCCCHHHHHHHHHHHHHHHHHHHHHHC-CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTE
T ss_pred cCCCccHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHhCC-EeECCCCHHHEEEeccCCcceeeeccCccccccCCCc
Confidence 3688777777 3467999999999999999999999 899 99999999999999887
Q ss_pred CeEEecCCcccccCCCCccccCCCCCCccccccCCCCccccccchHHH-HHHHHhCCCCCCcchhHhhhcCcccc--ccc
Q 018381 60 NPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTL-LLDLLSGKHIPPSHALDLIRGKNFLM--LMD 136 (357)
Q Consensus 60 ~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~-l~el~~g~~~~~~~~~~~~~~~~~~~--~~~ 136 (357)
.+||+|||+++..... ...||+.|+|||++.+.. +.++||||||++ .+++++|..||....+.......... ...
T Consensus 220 ~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 297 (336)
T 2vuw_A 220 QVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFK 297 (336)
T ss_dssp EEEECCCTTCBEEETT-EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCS
T ss_pred eEEEeeccccEecCCC-cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccC
Confidence 8999999999876543 458999999999998655 889999998777 77788898776432110000000000 001
Q ss_pred cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHH-HH
Q 018381 137 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV-AS 175 (357)
Q Consensus 137 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~-~~ 175 (357)
..........+++++.+||.+||+.| |+.+++ +|
T Consensus 298 ~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 298 TKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp SCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred cccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcC
Confidence 11111123467889999999999976 999999 66
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-27 Score=208.06 Aligned_cols=153 Identities=17% Similarity=0.103 Sum_probs=115.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCcccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST 80 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~g 80 (357)
++||+|.+++. .+ ....++.+++.||+.||.|||+++ |+||||||+|||++.+|.+||+++|
T Consensus 113 ~~g~~L~~~l~---~~-~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~------------- 174 (286)
T 3uqc_A 113 IRGGSLQEVAD---TS-PSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA------------- 174 (286)
T ss_dssp CCEEEHHHHHT---TC-CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC-------------
T ss_pred cCCCCHHHHHh---cC-CChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc-------------
Confidence 47899999993 33 356678999999999999999999 9999999999999999999998554
Q ss_pred CCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccC--CCCChhhHHHHHHHHHHh
Q 018381 81 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE--GHFSNDDGTELVRLASRC 158 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~c 158 (357)
|++ +++.++|||||||++|+|++|+.||.......... ........... ......+++.+.++|.+|
T Consensus 175 ---~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 243 (286)
T 3uqc_A 175 ---TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA-PAERDTAGQPIEPADIDRDIPFQISAVAARS 243 (286)
T ss_dssp ---CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE-ECCBCTTSCBCCHHHHCTTSCHHHHHHHHHH
T ss_pred ---ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH-HHHHHhccCCCChhhcccCCCHHHHHHHHHH
Confidence 333 36889999999999999999999987542110000 00010111000 012245678899999999
Q ss_pred ccCCCCCCCCHHHHHHHhCcccccc
Q 018381 159 LQYEPRERPNAKSLVASLTPLQKEA 183 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~l~~~~~~~ 183 (357)
|+.||++| |+.++++.|+.+....
T Consensus 244 l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 244 VQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred cccCCccC-CHHHHHHHHHHHhccC
Confidence 99999999 9999999998876553
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.6e-25 Score=214.76 Aligned_cols=108 Identities=15% Similarity=0.162 Sum_probs=78.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
|+||+|.++|. .+++++.. +|+.||+.||.|||++| ||||||||+||||+.+|.+||+|||+++..... .
T Consensus 324 v~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~ 397 (569)
T 4azs_A 324 LPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPT 397 (569)
T ss_dssp CCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSH
T ss_pred CCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCCCCcccc
Confidence 68999999995 56778775 47899999999999999 999999999999999999999999999866543 2
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCC
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 115 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~ 115 (357)
+.+||+.|||||++.+ .+..++|+||+|++++++.+|.
T Consensus 398 t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 398 NLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp HHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred CceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence 4578999999999975 5677899999999988775553
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.9e-22 Score=152.13 Aligned_cols=107 Identities=19% Similarity=0.323 Sum_probs=103.6
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.|+.+..++++|+.+++.|+|++|+..|+++|+++|. ++.+|+++|.+|..+|++++|+.++++||+++|+++.+|+++
T Consensus 9 nP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l 87 (126)
T 4gco_A 9 NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRK 87 (126)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 3677888999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|.++..+|++++|+++|+++++++|++.
T Consensus 88 g~~~~~~~~~~~A~~~~~~al~l~P~~~ 115 (126)
T 4gco_A 88 AACLVAMREWSKAQRAYEDALQVDPSNE 115 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCcCCH
Confidence 9999999999999999999999999864
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.84 E-value=6.1e-21 Score=151.04 Aligned_cols=107 Identities=17% Similarity=0.110 Sum_probs=101.0
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc------------hHHHhhHHHHHHhcCChHHHHHHHHHHHh
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS------------PTVFARRCLCYLLSDMPQEALGDAMQAQV 315 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 315 (357)
+...+..++..|+.+++.|+|++|+.+|++||+++|+ + +.+|+|+|.++.++|+|++|+.++++||+
T Consensus 7 ~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 7 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3567888999999999999999999999999999997 3 23999999999999999999999999999
Q ss_pred h-------CCCChHHH----HHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 316 I-------SPDWPTAF----YLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 316 ~-------~p~~~~a~----~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+ +|+++++| +++|.+|..+|++++|+++|+++++++|++.
T Consensus 86 l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 86 YFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred hhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 9 99999999 9999999999999999999999999999864
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=144.04 Aligned_cols=106 Identities=8% Similarity=-0.059 Sum_probs=103.2
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.|..+..+...|..+++.|+|++|+..|+++++++|. ++.+|+++|.+|..+|+|++|+..|++|++++|+++.+|+++
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~l 110 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHT 110 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHH
Confidence 5778889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
|.+|..+|++++|+.+|+++++++|+.
T Consensus 111 g~~~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 111 GQCQLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCH
Confidence 999999999999999999999999974
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.79 E-value=4e-19 Score=137.56 Aligned_cols=106 Identities=16% Similarity=0.125 Sum_probs=99.3
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCCh------
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP------ 321 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~------ 321 (357)
..+.+..+++.|+.+++.|+|++|+..|++||+++|. ++.+|+++|.+|+.+|+|++|+.++++||+++|++.
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 82 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLI 82 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHH
Confidence 4566788899999999999999999999999999999 999999999999999999999999999999998764
Q ss_pred -HHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 322 -TAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 322 -~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.+|+++|.++..+|++++|++.|+++++.+|+.
T Consensus 83 a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 83 AKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH
Confidence 589999999999999999999999999988763
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.7e-19 Score=142.47 Aligned_cols=107 Identities=19% Similarity=0.222 Sum_probs=101.2
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhcc------------------CCCCchHHHhhHHHHHHhcCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG------------------GTMVSPTVFARRCLCYLLSDMPQEALGD 309 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------------------~p~~~~~~~~~~a~~~~~~~~~~~A~~~ 309 (357)
....+..++..|+.+++.|+|++|+..|+++|++ +|. +..+|+|+|.||+++|+|++|+.+
T Consensus 7 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~~ 85 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEET 85 (162)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHHH
Confidence 3466788999999999999999999999999998 777 778999999999999999999999
Q ss_pred HHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 310 AMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 310 ~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+++||+++|+++.+|+++|.+|..+|++++|+.+|+++++++|++.
T Consensus 86 ~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 86 SSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 9999999999999999999999999999999999999999999864
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-18 Score=132.91 Aligned_cols=101 Identities=21% Similarity=0.294 Sum_probs=98.4
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
..+..+...|..++..|+|++|+..|+++++++|. ++.+|+++|.++..+|++++|+.+++++++++|+++.+|+.+|.
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 45678889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLE 351 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~ 351 (357)
++..+|++++|+.+|+++++++
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=8.7e-18 Score=133.61 Aligned_cols=106 Identities=12% Similarity=0.049 Sum_probs=102.0
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+.....+...|..++..|+|++|+..|+++++++|. ++.+|+++|.++..+|++++|+..+++|+.++|+++.+|+++
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l 95 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHA 95 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHH
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHH
Confidence 4667778889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
|.+|..+|++++|+++|+++++++|++
T Consensus 96 g~~~~~~g~~~~A~~~~~~al~~~p~~ 122 (148)
T 2vgx_A 96 AECLLQXGELAEAESGLFLAQELIANX 122 (148)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 999999999999999999999998874
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-17 Score=134.17 Aligned_cols=106 Identities=25% Similarity=0.368 Sum_probs=102.1
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
...+..+...|..++..|+|++|+..|+++++++|. +..+|+++|.+|+.+|++++|+.+++++++++|+++.+|+++|
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 356778889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 018381 329 AALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 329 ~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
.+|..+|++++|+.+|+++++++|++.
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~~p~~~ 113 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEAEGNGG 113 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHSSSC
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCch
Confidence 999999999999999999999999875
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=9.1e-18 Score=133.79 Aligned_cols=108 Identities=13% Similarity=0.117 Sum_probs=101.1
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHH
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 326 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 326 (357)
..++.+..+...|..+++.|+|++|+..|+++|+++|+ ++.+|+++|.+|..+|++++|+..++++++++|+++.+|++
T Consensus 26 ~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 104 (150)
T 4ga2_A 26 SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLK 104 (150)
T ss_dssp SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHH
Confidence 35666777788999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHH-HHHhhccccccc
Q 018381 327 QAAALFGLGMNNDAQET-LKDGTNLEAKKH 355 (357)
Q Consensus 327 ~g~~~~~lg~~~~A~~~-~~~al~l~p~~~ 355 (357)
+|.+|..+|++++|.+. +++|++++|++.
T Consensus 105 la~~~~~~~~~~~aa~~~~~~al~l~P~~~ 134 (150)
T 4ga2_A 105 IAELLCKNDVTDGRAKYWVERAAKLFPGSP 134 (150)
T ss_dssp HHHHHHHHCSSSSHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHhCcCCH
Confidence 99999999999988776 599999999863
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=130.60 Aligned_cols=106 Identities=13% Similarity=0.098 Sum_probs=101.9
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+.....+...|..++..|+|++|+..|+++++.+|. ++.+|+++|.++..+|++++|+..+++|+.++|+++.+++.+
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 92 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHA 92 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHH
Confidence 4566778889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
|.+|..+|++++|+..|+++++++|++
T Consensus 93 g~~~~~~g~~~~A~~~~~~al~~~p~~ 119 (142)
T 2xcb_A 93 AECHLQLGDLDGAESGFYSARALAAAQ 119 (142)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999965
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-17 Score=127.11 Aligned_cols=101 Identities=11% Similarity=0.028 Sum_probs=92.6
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 333 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 333 (357)
.+...|..+++.|++++|+..|+++++.+|. ++.+|+++|.++..+|++++|+..+++|++++|+++.+++.+|.++..
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhccccccc
Q 018381 334 LGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 334 lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+|++++|+..|+++++++|++.
T Consensus 98 ~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 98 EHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHHHC------
T ss_pred cCCHHHHHHHHHHHHHhCcCCC
Confidence 9999999999999999999864
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2e-18 Score=165.73 Aligned_cols=104 Identities=13% Similarity=0.088 Sum_probs=90.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++.. +..++.||++||.|||+++ |+||||||+|||++. .+||+|||+++.....
T Consensus 421 ~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 421 INGKLAKDVIED----------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp CCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred CCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 578999999942 5689999999999999999 999999999999998 9999999999977653
Q ss_pred ------CccccCCCCCCcccccc--CCCCccccccchHHHHHHHHhCCCC
Q 018381 76 ------KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHI 117 (357)
Q Consensus 76 ------~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~g~~~ 117 (357)
.+..||+.|+|||++.. ..|+..+|+||..+-..+.+.++.+
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~r 537 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRAR 537 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 24578999999999986 5677789999999988888877654
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.67 E-value=4e-16 Score=121.46 Aligned_cols=102 Identities=22% Similarity=0.432 Sum_probs=99.1
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
.+..+...|..++..|+|++|+..|.++++++|. +..+|+++|.++..+|++++|+..++++++++|+++.+|+.+|.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 86 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence 4667889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
+..+|++++|+..|+++++++|+
T Consensus 87 ~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 87 QLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHChh
Confidence 99999999999999999999998
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.9e-16 Score=133.23 Aligned_cols=103 Identities=16% Similarity=0.040 Sum_probs=90.7
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhh----------------HHHHHHhcCChHHHHHHHHHHHh
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFAR----------------RCLCYLLSDMPQEALGDAMQAQV 315 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~----------------~a~~~~~~~~~~~A~~~~~~al~ 315 (357)
+..+..+|..++..|+|++|+..|+++++++|+ ++.+|++ +|.+|..+|++++|+..++++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 456678888888999999999999999999998 8888888 89999999999999999999999
Q ss_pred hCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 316 ISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 316 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
++|+++.+|+.+|.++..+|++++|+.+|+++++++|++.
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~ 122 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNL 122 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 9999999999999999999999999999999999988753
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.66 E-value=5e-17 Score=128.28 Aligned_cols=91 Identities=14% Similarity=0.077 Sum_probs=85.3
Q ss_pred hcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCCh----------HHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 018381 264 RAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMP----------QEALGDAMQAQVISPDWPTAFYLQAAALFG 333 (357)
Q Consensus 264 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 333 (357)
+.+.|++|+..|+++++++|. ++.+|+++|.++..++++ ++|+..|++||+++|+++.+|+++|.+|..
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 445699999999999999999 999999999999999886 599999999999999999999999999998
Q ss_pred CC-----------ChHHHHHHHHHhhccccccc
Q 018381 334 LG-----------MNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 334 lg-----------~~~~A~~~~~~al~l~p~~~ 355 (357)
+| ++++|+++|++|++++|++.
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 85 89999999999999999863
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.65 E-value=9.2e-16 Score=127.75 Aligned_cols=109 Identities=19% Similarity=0.265 Sum_probs=103.1
Q ss_pred hHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCch----------------HHHhhHHHHHHhcCChHHHHHH
Q 018381 246 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP----------------TVFARRCLCYLLSDMPQEALGD 309 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----------------~~~~~~a~~~~~~~~~~~A~~~ 309 (357)
......+..+...|..++..|+|++|+..|++++++.|. ++ .+|+++|.++..+|++++|+.+
T Consensus 32 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 110 (198)
T 2fbn_A 32 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDH 110 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 345677888999999999999999999999999999998 76 8999999999999999999999
Q ss_pred HHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 310 AMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 310 ~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
++++++++|+++.+++++|.++..+|++++|+..|+++++++|++.
T Consensus 111 ~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 156 (198)
T 2fbn_A 111 ASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL 156 (198)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 9999999999999999999999999999999999999999999753
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.65 E-value=9.1e-16 Score=138.84 Aligned_cols=108 Identities=12% Similarity=0.161 Sum_probs=103.3
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc---------------hHHHhhHHHHHHhcCChHHHHHHHH
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---------------PTVFARRCLCYLLSDMPQEALGDAM 311 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~ 311 (357)
..+..+..+...|..+++.|+|++|+..|+++++++|. + ..+|+++|.||+++|+|++|+..++
T Consensus 142 ~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 220 (336)
T 1p5q_A 142 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCN 220 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 46777889999999999999999999999999999999 7 6899999999999999999999999
Q ss_pred HHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 312 QAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 312 ~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+|++++|+++.+|+++|.+|..+|++++|+.+|+++++++|++.
T Consensus 221 ~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 264 (336)
T 1p5q_A 221 KALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 264 (336)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
Confidence 99999999999999999999999999999999999999999863
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.65 E-value=8.2e-16 Score=144.99 Aligned_cols=109 Identities=14% Similarity=0.222 Sum_probs=101.1
Q ss_pred hHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc---------------hHHHhhHHHHHHhcCChHHHHHHH
Q 018381 246 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---------------PTVFARRCLCYLLSDMPQEALGDA 310 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~ 310 (357)
...+..+..++..|..+++.|+|++|+..|++||+++|. + ..+|+|+|.||+++|+|++|+.+|
T Consensus 262 ~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~ 340 (457)
T 1kt0_A 262 KEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECC 340 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 346778889999999999999999999999999999998 7 689999999999999999999999
Q ss_pred HHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 311 MQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 311 ~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
++||+++|+++.+|+++|.+|+.+|+|++|+.+|+++++++|++.
T Consensus 341 ~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~ 385 (457)
T 1kt0_A 341 DKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 385 (457)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----
T ss_pred HHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999999999999999999999999864
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=5.1e-16 Score=153.51 Aligned_cols=110 Identities=13% Similarity=-0.001 Sum_probs=101.0
Q ss_pred hhHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHH
Q 018381 245 WTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAF 324 (357)
Q Consensus 245 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 324 (357)
..-.++.+..+...|..+.+.|++++|+..|++||+++|+ ++.+|+++|.+|..+|++++|++.+++|++++|+++.+|
T Consensus 36 l~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~ 114 (723)
T 4gyw_A 36 LEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAH 114 (723)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 3445667788899999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 325 YLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 325 ~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+++|.+|..+|++++|+++|++|++++|++.
T Consensus 115 ~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~ 145 (723)
T 4gyw_A 115 SNLASIHKDSGNIPEAIASYRTALKLKPDFP 145 (723)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 9999999999999999999999999999863
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.5e-15 Score=113.01 Aligned_cols=104 Identities=24% Similarity=0.384 Sum_probs=99.5
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
.+..+...|..++..|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4567788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+..+|++++|+..|+++++++|++.
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~~ 106 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANNP 106 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCCH
Confidence 9999999999999999999999753
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=3e-15 Score=115.37 Aligned_cols=105 Identities=23% Similarity=0.364 Sum_probs=100.1
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
.....+...|..++..|++++|+..|+++++.+|. +..+++++|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 92 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAA 92 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 44567788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
++..+|++++|++.|+++++++|++.
T Consensus 93 ~~~~~~~~~~A~~~~~~~~~~~p~~~ 118 (133)
T 2lni_A 93 ALEAMKDYTKAMDVYQKALDLDSSCK 118 (133)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCGGGT
T ss_pred HHHHHhhHHHHHHHHHHHHHhCCCch
Confidence 99999999999999999999999753
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.6e-16 Score=126.50 Aligned_cols=97 Identities=10% Similarity=-0.082 Sum_probs=90.5
Q ss_pred hhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCh
Q 018381 258 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMN 337 (357)
Q Consensus 258 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~ 337 (357)
.|..+..+|++++|+..|.+++..+|+ ++.+++++|.+|+.+|+|++|+..++++++++|+++.+|+.+|.+|..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 577788899999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccccc
Q 018381 338 NDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 338 ~~A~~~~~~al~l~p~~~ 355 (357)
++|+.+|+++++++|++.
T Consensus 82 ~~A~~~~~~al~~~p~~~ 99 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQK 99 (150)
T ss_dssp HHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCCCH
Confidence 999999999999999863
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-15 Score=150.43 Aligned_cols=105 Identities=12% Similarity=0.045 Sum_probs=73.0
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
|+.+..+...|..+.+.|++++|+.+|++||+++|+ ++.+|+|+|.+|.++|++++|+..+++|++++|+++.+|+++|
T Consensus 6 P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg 84 (723)
T 4gyw_A 6 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMG 84 (723)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 455666666677777777777777777777777776 6677777777777777777777777777777777777777777
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccc
Q 018381 329 AALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 329 ~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.+|..+|++++|+++|++|++++|++
T Consensus 85 ~~l~~~g~~~~A~~~~~kAl~l~P~~ 110 (723)
T 4gyw_A 85 NTLKEMQDVQGALQCYTRAIQINPAF 110 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 77777777777777777777776654
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.63 E-value=9e-16 Score=129.93 Aligned_cols=105 Identities=14% Similarity=0.211 Sum_probs=100.0
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
|..+..+...|..++..|++++|+..|+++++++|+ ++.+++++|.++..+|++++|+..++++++++|+++.+++.+|
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg 80 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLS 80 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 445667889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhC-----------CChHHHHHHHHHhhcccccc
Q 018381 329 AALFGL-----------GMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 329 ~~~~~l-----------g~~~~A~~~~~~al~l~p~~ 354 (357)
.++..+ |++++|+..|+++++++|++
T Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~ 117 (217)
T 2pl2_A 81 EAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRY 117 (217)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCccc
Confidence 999999 99999999999999999985
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=9.8e-16 Score=135.10 Aligned_cols=102 Identities=22% Similarity=0.436 Sum_probs=99.0
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
+..+...|..++..|+|++|+..|+++++++|. ++.+|+++|.+|..+|++++|+.++++|++++|+++.+++++|.+|
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 566788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 018381 332 FGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
..+|++++|+..|+++++++|++
T Consensus 83 ~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999976
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.62 E-value=4e-15 Score=122.06 Aligned_cols=106 Identities=20% Similarity=0.200 Sum_probs=100.4
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+.....+...|..+...++++.|+..+.++++++|. +..++..+|.+|..+|++++|+..++++++++|+++.+|+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l 147 (184)
T 3vtx_A 69 DTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSI 147 (184)
T ss_dssp CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHH
Confidence 3445566778899999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
|.+|..+|++++|+++|++|++++|++
T Consensus 148 g~~~~~~g~~~~A~~~~~~al~~~p~~ 174 (184)
T 3vtx_A 148 GLAYEGKGLRDEAVKYFKKALEKEEKK 174 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhCCccC
Confidence 999999999999999999999999985
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.5e-15 Score=137.55 Aligned_cols=109 Identities=16% Similarity=0.216 Sum_probs=98.2
Q ss_pred hHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCch-----------------HHHhhHHHHHHhcCChHHHHH
Q 018381 246 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP-----------------TVFARRCLCYLLSDMPQEALG 308 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~a~~~~~~~~~~~A~~ 308 (357)
...+..+..++..|+.+++.|+|++|+..|++++++.|. +. .+|+|+|.||+++|+|++|+.
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~ 251 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIG 251 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 345677888999999999999999999999999999998 76 389999999999999999999
Q ss_pred HHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 309 DAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 309 ~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+|++|++++|+++.+|+++|.+|..+|++++|+.+|+++++++|++.
T Consensus 252 ~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~ 298 (338)
T 2if4_A 252 HCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDK 298 (338)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH
Confidence 99999999999999999999999999999999999999999999864
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.7e-15 Score=111.83 Aligned_cols=103 Identities=13% Similarity=0.064 Sum_probs=97.9
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC--ChHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD--WPTAFYLQAA 329 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~--~~~a~~~~g~ 329 (357)
+..+...|..++..|++++|+..|+++++++|. +..+++++|.++..+|++++|+..++++++++|+ +..+++.+|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~ 84 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKAD 84 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHH
Confidence 445667899999999999999999999999999 9999999999999999999999999999999999 9999999999
Q ss_pred HHHhC-CChHHHHHHHHHhhccccccc
Q 018381 330 ALFGL-GMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 330 ~~~~l-g~~~~A~~~~~~al~l~p~~~ 355 (357)
++..+ |++++|+++|+++++.+|...
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 85 ALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 99999 999999999999999999754
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=4.8e-15 Score=116.53 Aligned_cols=104 Identities=23% Similarity=0.269 Sum_probs=98.5
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc---hHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+..+...|..++..|+|++|+..|+++++.+|. + ..+|+++|.+|..+|++++|+..++++++++|+++.+++.+
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR 105 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH
Confidence 3456678899999999999999999999999998 7 89999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|.++..+|++++|+..|+++++++|++.
T Consensus 106 a~~~~~~~~~~~A~~~~~~al~~~p~~~ 133 (148)
T 2dba_A 106 SQALEKLGRLDQAVLDLQRCVSLEPKNK 133 (148)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCSSCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCcH
Confidence 9999999999999999999999999753
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.61 E-value=7.9e-15 Score=117.62 Aligned_cols=106 Identities=24% Similarity=0.381 Sum_probs=101.2
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
....+..+...|..++..|++++|+..|.++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++.+
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 87 (166)
T 1a17_A 9 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 87 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 3466788899999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
|.++..+|++++|+..|+++++++|++
T Consensus 88 a~~~~~~~~~~~A~~~~~~a~~~~p~~ 114 (166)
T 1a17_A 88 AASNMALGKFRAALRDYETVVKVKPHD 114 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999975
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-15 Score=140.09 Aligned_cols=110 Identities=7% Similarity=-0.044 Sum_probs=99.5
Q ss_pred hhhHHHHHhHHHHHhhhHHhhcCC-hhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChH
Q 018381 244 MWTDQIQETLNSKKRGDAAFRAKD-FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT 322 (357)
Q Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~~~-~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~ 322 (357)
...-.+.....+..+|..+...|+ +++|+..|+++|+++|+ ++.+|+++|.++..+|++++|+.++++||+++|++..
T Consensus 123 al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~ 201 (382)
T 2h6f_A 123 AIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYH 201 (382)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHH
T ss_pred HHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHH
Confidence 334456777888899999999996 99999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 323 AFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 323 a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+|+++|.++..+|++++|+.+|+++++++|++
T Consensus 202 a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~ 233 (382)
T 2h6f_A 202 AWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN 233 (382)
T ss_dssp HHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999975
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.61 E-value=2.3e-15 Score=137.86 Aligned_cols=107 Identities=21% Similarity=0.273 Sum_probs=101.2
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhc----------------cCCCCchHHHhhHHHHHHhcCChHHHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFID----------------GGTMVSPTVFARRCLCYLLSDMPQEALGDAM 311 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~----------------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 311 (357)
....+..+...|..+++.|+|++|+..|+++++ ++|. +..+|+++|.+|+++|+|++|+.+++
T Consensus 219 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~~~~ 297 (370)
T 1ihg_A 219 ILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDSCL 297 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHHHHH
Confidence 455677889999999999999999999999998 7888 88999999999999999999999999
Q ss_pred HHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 312 QAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 312 ~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+|++++|+++.+|+++|.+|..+|++++|+.+|++|++++|++.
T Consensus 298 ~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~ 341 (370)
T 1ihg_A 298 EALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDK 341 (370)
T ss_dssp HHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999999999999999999753
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.61 E-value=2.3e-15 Score=138.29 Aligned_cols=107 Identities=13% Similarity=-0.064 Sum_probs=102.2
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCC-hHHHHHHHHHHHhhCCCChHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM-PQEALGDAMQAQVISPDWPTAFYL 326 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~~~p~~~~a~~~ 326 (357)
.+..+..+...|..+...|++++|+..|+++|+++|. +..+|+++|.++..+|+ +++|+.++++||+++|+++.+|++
T Consensus 93 ~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~ 171 (382)
T 2h6f_A 93 SDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHH 171 (382)
T ss_dssp CHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 4566777888999999999999999999999999999 99999999999999997 999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 327 QAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 327 ~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+|.++..+|++++|+.+|+++++++|++.
T Consensus 172 ~g~~~~~~g~~~eAl~~~~kal~ldP~~~ 200 (382)
T 2h6f_A 172 RRVLVEWLRDPSQELEFIADILNQDAKNY 200 (382)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCccCH
Confidence 99999999999999999999999999863
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-14 Score=111.43 Aligned_cols=106 Identities=21% Similarity=0.284 Sum_probs=101.7
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+..+..+...|..++..|++++|+..|+++++..|. +..++.++|.++...|++++|+..++++++++|+++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 4566778889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
|.++..+|++++|+..|+++++++|++
T Consensus 87 ~~~~~~~~~~~~A~~~~~~~~~~~p~~ 113 (131)
T 2vyi_A 87 GLALSSLNKHVEAVAYYKKALELDPDN 113 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCccc
Confidence 999999999999999999999999975
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.60 E-value=5e-15 Score=113.90 Aligned_cols=100 Identities=14% Similarity=0.090 Sum_probs=95.3
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCCCch---HHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC---hHHHHHH
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP---TVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---PTAFYLQ 327 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~a~~~~ 327 (357)
.+...|..++..|+|++|+..|+++++..|. +. .+++++|.+++..|++++|+..++++++.+|++ +.+++.+
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 4567899999999999999999999999998 77 799999999999999999999999999999999 8999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
|.++..+|++++|+..|+++++.+|++
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999999975
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.60 E-value=8e-15 Score=123.21 Aligned_cols=96 Identities=9% Similarity=0.005 Sum_probs=90.3
Q ss_pred hhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhC---
Q 018381 258 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGL--- 334 (357)
Q Consensus 258 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~l--- 334 (357)
.|..++..|++++|+..|+++++++|+ +..+|+++|.++..+|++++|+..++++++++|+++.+|+.+|.+|+..
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999888876543
Q ss_pred --------------------------------CChHHHHHHHHHhhcccccc
Q 018381 335 --------------------------------GMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 335 --------------------------------g~~~~A~~~~~~al~l~p~~ 354 (357)
|+|++|+.+|+++++++|+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 139 EKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 56899999999999999974
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.59 E-value=8.9e-16 Score=116.61 Aligned_cols=90 Identities=13% Similarity=0.035 Sum_probs=82.6
Q ss_pred hcCChhHHHHHHHHHhcc---CCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHH
Q 018381 264 RAKDFPTAIECYTHFIDG---GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDA 340 (357)
Q Consensus 264 ~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A 340 (357)
..|++++|+..|++++++ +|. +..+++++|.+|..+|+|++|+..++++++++|+++.+++.+|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 368999999999999999 688 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccc
Q 018381 341 QETLKDGTNLEAKK 354 (357)
Q Consensus 341 ~~~~~~al~l~p~~ 354 (357)
+..|+++++++|++
T Consensus 81 ~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 81 VELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCc
Confidence 99999999998875
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.59 E-value=7.5e-15 Score=124.77 Aligned_cols=103 Identities=18% Similarity=0.158 Sum_probs=98.8
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCC-CCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGT-MVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
+..+...|..++..|+|++|+..|+++++++| . +..+++++|.++..+|++++|+..++++++++|+++.+|+.+|.+
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 85 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAA 85 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 46788999999999999999999999999999 7 899999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+..+|++++|+..|+++++++|++.
T Consensus 86 ~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 86 YRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHcccHHHHHHHHHHHHHHCCCcH
Confidence 9999999999999999999999853
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.56 E-value=1e-14 Score=123.43 Aligned_cols=104 Identities=14% Similarity=0.051 Sum_probs=64.5
Q ss_pred HHHhHHHHHhhhHHhhc-----------CChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhC
Q 018381 249 IQETLNSKKRGDAAFRA-----------KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS 317 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~-----------~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 317 (357)
|..+..+...|..+... |++++|+..|+++++++|+ ++.+|+++|.++..+|++++|+..+++|++++
T Consensus 70 P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 70 PRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE 148 (217)
T ss_dssp TTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc
Confidence 33344455556666666 6666666666666666666 66666666666666666666666666666666
Q ss_pred CCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 318 PDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 318 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 149 -~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 184 (217)
T 2pl2_A 149 -DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKD 184 (217)
T ss_dssp -CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred -cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 666666666666666666666666666666666654
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.6e-14 Score=110.73 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=97.7
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC-------hH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW-------PT 322 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-------~~ 322 (357)
+.+..+...|..++..|++++|+..|.++++.+|. +..+++++|.++...|++++|+..+++++.++|++ +.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 80 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 34567788999999999999999999999999999 99999999999999999999999999999999887 99
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 323 AFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 323 a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
+++.+|.++..+|++++|+..|+++++++|+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999884
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.53 E-value=7.4e-14 Score=118.58 Aligned_cols=103 Identities=16% Similarity=0.177 Sum_probs=98.2
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCCh-------H
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP-------T 322 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-------~ 322 (357)
.+...+...|..++..|++++|+..|+++++.+|. +..+|.++|.+|..+|++++|+..++++++++|+++ .
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 118 (228)
T 4i17_A 40 QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAI 118 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 44456777999999999999999999999999999 999999999999999999999999999999999999 7
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 323 AFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 323 a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
+|+.+|.++..+|++++|+..|+++++++|+
T Consensus 119 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 119 YYLKEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred HHHHHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 7999999999999999999999999999998
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.9e-14 Score=114.84 Aligned_cols=106 Identities=14% Similarity=0.124 Sum_probs=100.0
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHH-HHhcCCh--HHHHHHHHHHHhhCCCChHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLC-YLLSDMP--QEALGDAMQAQVISPDWPTAFY 325 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~-~~~~~~~--~~A~~~~~~al~~~p~~~~a~~ 325 (357)
+..+..+...|..++..|++++|+..|.++++++|. +..++.++|.+ +...|++ ++|+..++++++++|+++.+++
T Consensus 41 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 119 (177)
T 2e2e_A 41 PQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALM 119 (177)
T ss_dssp CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHH
Confidence 344567788999999999999999999999999999 99999999999 8899999 9999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 326 LQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 326 ~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
.+|.++..+|++++|+..|+++++++|++.
T Consensus 120 ~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 149 (177)
T 2e2e_A 120 LLASDAFMQANYAQAIELWQKVMDLNSPRI 149 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHcccHHHHHHHHHHHHhhCCCCc
Confidence 999999999999999999999999999763
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.4e-13 Score=104.37 Aligned_cols=102 Identities=19% Similarity=0.241 Sum_probs=97.7
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
+..+...|..++..|++++|+..|.++++..|. +..+++++|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 456778899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 018381 332 FGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
..+|++++|+..|+++++++|++
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~ 110 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALELDPNN 110 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHhcCHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999975
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.52 E-value=8.5e-14 Score=116.69 Aligned_cols=103 Identities=16% Similarity=0.097 Sum_probs=97.7
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCCh----------
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP---------- 321 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---------- 321 (357)
+..+...|..++..|++++|+..|+++++++|. +..+|+++|.+|..+|++++|+..+++++++.|++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 115 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQ 115 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccc
Confidence 457788999999999999999999999999999 999999999999999999999999999999888877
Q ss_pred ------HHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 322 ------TAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 322 ------~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
.+++++|.++..+|++++|+..|+++++++|++.
T Consensus 116 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 116 FKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred cCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 9999999999999999999999999999999753
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.3e-14 Score=137.33 Aligned_cols=105 Identities=24% Similarity=0.379 Sum_probs=100.4
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
..+..+...|..+++.|+|++|+..|++|++++|. ++.+|+++|.+|..+|++++|+..+++|++++|+++.+|+++|.
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45667778899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+|..+|++++|++.|+++++++|++.
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~~ 108 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHDK 108 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999864
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.52 E-value=9.1e-14 Score=113.84 Aligned_cols=108 Identities=16% Similarity=0.136 Sum_probs=93.9
Q ss_pred hHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHH
Q 018381 246 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 325 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 325 (357)
...|..+..+...|..++..|++++|+..+.+++...|. +..++.++|.++...++++.|+..+.+++.++|+++.+++
T Consensus 33 ~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~ 111 (184)
T 3vtx_A 33 KADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYY 111 (184)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHH
Confidence 345666777888888888888888888888888888888 8888888888888888888888889999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 326 LQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 326 ~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.+|.++..+|++++|++.|+++++++|++
T Consensus 112 ~lg~~~~~~g~~~~A~~~~~~~l~~~p~~ 140 (184)
T 3vtx_A 112 KLGLVYDSMGEHDKAIEAYEKTISIKPGF 140 (184)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHhCCchhHHHHHHHHHHhcchh
Confidence 99999999999999999999999999875
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.51 E-value=9.7e-15 Score=109.05 Aligned_cols=96 Identities=14% Similarity=0.203 Sum_probs=90.4
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC------hHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW------PTAF 324 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~a~ 324 (357)
.+..+...|..++..|+|++|+..|+++++++|. ++.+|+++|.++..+|++++|+..++++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 3566788999999999999999999999999999 99999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHh
Q 018381 325 YLQAAALFGLGMNNDAQETLKDG 347 (357)
Q Consensus 325 ~~~g~~~~~lg~~~~A~~~~~~a 347 (357)
+++|.++..+|++++|+..|++.
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHhHhhhHhHHHHh
Confidence 99999999999999998877654
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.51 E-value=7.8e-15 Score=116.68 Aligned_cols=83 Identities=7% Similarity=-0.270 Sum_probs=79.5
Q ss_pred HHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccc
Q 018381 272 IECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLE 351 (357)
Q Consensus 272 ~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 351 (357)
-..|+++++++|+ +..+++++|.+++..|++++|+..++++++++|+++.+|+.+|.++..+|+|++|+.+|+++++++
T Consensus 22 ~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~ 100 (151)
T 3gyz_A 22 GATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALG 100 (151)
T ss_dssp SCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 3567889999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 018381 352 AKKH 355 (357)
Q Consensus 352 p~~~ 355 (357)
|++.
T Consensus 101 P~~~ 104 (151)
T 3gyz_A 101 KNDY 104 (151)
T ss_dssp SSCC
T ss_pred CCCc
Confidence 9864
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.50 E-value=6.9e-14 Score=105.57 Aligned_cols=85 Identities=16% Similarity=0.148 Sum_probs=82.3
Q ss_pred hHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhh
Q 018381 269 PTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGT 348 (357)
Q Consensus 269 ~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al 348 (357)
++|+..|+++++.+|. ++.+++++|.+|...|++++|+..++++++++|+++.+|+.+|.++..+|++++|+..|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4689999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 018381 349 NLEAKK 354 (357)
Q Consensus 349 ~l~p~~ 354 (357)
+++|+.
T Consensus 81 ~~~~~~ 86 (115)
T 2kat_A 81 AAAQSR 86 (115)
T ss_dssp HHHHHH
T ss_pred Hhcccc
Confidence 999864
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.48 E-value=2.7e-13 Score=117.77 Aligned_cols=105 Identities=14% Similarity=0.002 Sum_probs=101.1
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
+..+..+...|..++..|++++|+..|+++++++|. +..+|.++|.++...|++++|+..++++++++|+++.+++.+|
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la 118 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 118 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHH
Confidence 456778889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccc
Q 018381 329 AALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 329 ~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.++..+|++++|+..|+++++++|++
T Consensus 119 ~~~~~~g~~~~A~~~~~~a~~~~~~~ 144 (275)
T 1xnf_A 119 IALYYGGRDKLAQDDLLAFYQDDPND 144 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999975
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=4.6e-15 Score=130.72 Aligned_cols=71 Identities=14% Similarity=0.076 Sum_probs=59.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCcccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST 80 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~g 80 (357)
|+||+|.+ +. . .+...++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.
T Consensus 182 ~~g~~L~~-l~--~------~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~NILl~-~~~vkl~DFG~a~~--------- 241 (282)
T 1zar_A 182 IDAKELYR-VR--V------ENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVS-EEGIWIIDFPQSVE--------- 241 (282)
T ss_dssp CCCEEGGG-CC--C------SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEE-TTEEEECCCTTCEE---------
T ss_pred cCCCcHHH-cc--h------hhHHHHHHHHHHHHHHHHHCC-CEeCCCCHHHEEEE-CCcEEEEECCCCeE---------
Confidence 57889988 52 1 234579999999999999999 99999999999999 99999999999863
Q ss_pred CCCCCCccccc
Q 018381 81 NLAFTPPEYLR 91 (357)
Q Consensus 81 t~~y~aPE~~~ 91 (357)
+..++|||++.
T Consensus 242 ~~~~~a~e~l~ 252 (282)
T 1zar_A 242 VGEEGWREILE 252 (282)
T ss_dssp TTSTTHHHHHH
T ss_pred CCCCCHHHHHH
Confidence 34578898875
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.46 E-value=5e-13 Score=111.92 Aligned_cols=101 Identities=13% Similarity=0.107 Sum_probs=93.7
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
++..+...|..++..|+|++|+..|++++ +| ++.+|+++|.+|..+|++++|+..++++++++|+++.+|+.+|.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~ 80 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQ--DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGML 80 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 44566788999999999999999999996 33 678999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+..+|++++|+++|++++++.|++.
T Consensus 81 ~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 81 YYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHcccHHHHHHHHHHHHHhCCCcc
Confidence 9999999999999999999988754
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.46 E-value=5.7e-13 Score=114.37 Aligned_cols=103 Identities=20% Similarity=0.291 Sum_probs=99.5
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+..+..+...|..++..|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.+|+.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l 213 (258)
T 3uq3_A 135 NPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRK 213 (258)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 4566778889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLE 351 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~ 351 (357)
|.++..+|++++|+..|+++++++
T Consensus 214 ~~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 214 ATAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhC
Confidence 999999999999999999999999
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.46 E-value=8.7e-14 Score=137.57 Aligned_cols=105 Identities=10% Similarity=-0.082 Sum_probs=101.1
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+..+..+...|..++..|++++|+..|+++++++|+ +..+|+++|.+|..+|++++|+..|++|++++|+++.+|+++
T Consensus 429 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~l 507 (681)
T 2pzi_A 429 FSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGW-RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLAL 507 (681)
T ss_dssp CTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHH
T ss_pred cccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 3566778889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
|.++..+|++++ ++.|+++++++|++
T Consensus 508 g~~~~~~g~~~~-~~~~~~al~~~P~~ 533 (681)
T 2pzi_A 508 AATAELAGNTDE-HKFYQTVWSTNDGV 533 (681)
T ss_dssp HHHHHHHTCCCT-TCHHHHHHHHCTTC
T ss_pred HHHHHHcCChHH-HHHHHHHHHhCCch
Confidence 999999999999 99999999999986
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.4e-13 Score=106.02 Aligned_cols=78 Identities=14% Similarity=-0.018 Sum_probs=72.8
Q ss_pred HHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 277 HFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 277 ~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
++..++|+ .+.++.++|.+|++.|+|++|+..+++||+++|+++.+|+++|.+|..+|++++|+.+|+++++++|++.
T Consensus 4 r~a~inP~-~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 81 (126)
T 4gco_A 4 RLAYINPE-LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFI 81 (126)
T ss_dssp ---CCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhh
Confidence 45568999 9999999999999999999999999999999999999999999999999999999999999999999863
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.44 E-value=4e-13 Score=116.59 Aligned_cols=105 Identities=13% Similarity=0.045 Sum_probs=97.8
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc---hHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC---hHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---PTA 323 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~a 323 (357)
..+..+...|..++..|+|++|+..|+++++..|. + ..+++++|.+|+.+|++++|+..++++++++|++ +.+
T Consensus 13 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 34567789999999999999999999999999998 8 8899999999999999999999999999998854 679
Q ss_pred HHHHHHHHHh--------CCChHHHHHHHHHhhccccccc
Q 018381 324 FYLQAAALFG--------LGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 324 ~~~~g~~~~~--------lg~~~~A~~~~~~al~l~p~~~ 355 (357)
++.+|.+++. +|++++|+..|+++++++|++.
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 9999999999 9999999999999999999863
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-12 Score=99.99 Aligned_cols=103 Identities=19% Similarity=0.242 Sum_probs=97.1
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
....+...|..+...|++++|+..|.++++..|. +..+++++|.++...|++++|+..++++++..|++..+++.+|.+
T Consensus 34 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 112 (136)
T 2fo7_A 34 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNA 112 (136)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 3456677899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+...|++++|+..|+++++++|+.
T Consensus 113 ~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 113 YYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHccHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999863
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.43 E-value=5e-13 Score=108.96 Aligned_cols=111 Identities=13% Similarity=-0.028 Sum_probs=90.3
Q ss_pred hhhhhHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHH-HhcCChHHHHHHHHHHHhhCCCC
Q 018381 242 FQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCY-LLSDMPQEALGDAMQAQVISPDW 320 (357)
Q Consensus 242 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~-~~~~~~~~A~~~~~~al~~~p~~ 320 (357)
.......|.....+...|..+...|++++|+..|+++++.+| ++..+..++.+. ...++..+|+..++++++++|++
T Consensus 30 ~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~ 107 (176)
T 2r5s_A 30 QTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDN 107 (176)
T ss_dssp HTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTC
T ss_pred HHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCC
Confidence 334455777788888999999999999999999999998888 445555555443 23344556888999999999999
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 321 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 321 ~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+.+++.+|.++..+|++++|+..|+++++++|+.
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999875
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.42 E-value=3e-13 Score=98.99 Aligned_cols=92 Identities=16% Similarity=0.125 Sum_probs=86.3
Q ss_pred HHhhhHHhhcCChhHHHHHHHHHhccCCCCchH-HHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhC
Q 018381 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT-VFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGL 334 (357)
Q Consensus 256 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~-~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~l 334 (357)
...|..++..|++++|+..|+++++.+|. +.. +|+++|.+|..+|++++|+..++++++++|+++.++++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~-------- 74 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR-------- 74 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------
Confidence 46789999999999999999999999999 999 99999999999999999999999999999999999866
Q ss_pred CChHHHHHHHHHhhcccccccC
Q 018381 335 GMNNDAQETLKDGTNLEAKKHR 356 (357)
Q Consensus 335 g~~~~A~~~~~~al~l~p~~~~ 356 (357)
+.+.+|+..|+++++++|++..
T Consensus 75 ~~~~~a~~~~~~~~~~~p~~~~ 96 (99)
T 2kc7_A 75 KMVMDILNFYNKDMYNQLEHHH 96 (99)
T ss_dssp HHHHHHHHHHCCTTHHHHCCSS
T ss_pred HHHHHHHHHHHHHhccCccccc
Confidence 7789999999999999998653
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=7.2e-13 Score=128.28 Aligned_cols=103 Identities=9% Similarity=-0.020 Sum_probs=57.6
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
....+...|..+...|++++|+..|+++++++|. +..+++++|.+|..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 56 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 134 (568)
T 2vsy_A 56 HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNW 134 (568)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3444455555555555555555555555555555 555555555555555555555555555555555555555555555
Q ss_pred HHhC---CChHHHHHHHHHhhcccccc
Q 018381 331 LFGL---GMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 331 ~~~l---g~~~~A~~~~~~al~l~p~~ 354 (357)
+..+ |++++|++.|+++++.+|+.
T Consensus 135 ~~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 135 RRRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HHHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred HHHhhccccHHHHHHHHHHHHhcCCcc
Confidence 5555 55555555555555555543
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1.9e-12 Score=105.02 Aligned_cols=106 Identities=12% Similarity=0.059 Sum_probs=100.1
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
+.....+...|..++..|++++|+..|+++++..|. +..++.++|.++...|++++|+..++++++.+|+++.+++.+|
T Consensus 73 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 151 (186)
T 3as5_A 73 PDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIA 151 (186)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHH
Confidence 344566778899999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 018381 329 AALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 329 ~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
.++..+|++++|+..|+++++++|++.
T Consensus 152 ~~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 152 FSYEQMGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCch
Confidence 999999999999999999999999864
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.9e-13 Score=108.37 Aligned_cols=84 Identities=10% Similarity=-0.066 Sum_probs=80.0
Q ss_pred HHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 018381 271 AIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNL 350 (357)
Q Consensus 271 A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 350 (357)
+-..|+++++++|. +..+++++|.+++..|+|++|+..+++++.++|+++.+|+.+|.++..+|++++|+.+|++++++
T Consensus 6 ~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 6 GGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 34568899999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 018381 351 EAKKH 355 (357)
Q Consensus 351 ~p~~~ 355 (357)
+|++.
T Consensus 85 ~p~~~ 89 (148)
T 2vgx_A 85 DIXEP 89 (148)
T ss_dssp STTCT
T ss_pred CCCCc
Confidence 99864
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.41 E-value=7.6e-13 Score=120.32 Aligned_cols=103 Identities=16% Similarity=0.096 Sum_probs=98.6
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
.+..+...|..++..|++++|+..|+++++.+|. +..+|+++|.++..+|++++|+..++++++++|+++.+|+.+|.+
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVS 142 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 3455778899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
|..+|++++|+..|+++++++|++
T Consensus 143 ~~~~g~~~~A~~~~~~al~~~p~~ 166 (365)
T 4eqf_A 143 YTNTSHQQDACEALKNWIKQNPKY 166 (365)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCHHH
T ss_pred HHccccHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999975
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.40 E-value=8.4e-13 Score=120.01 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=98.9
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
.+..+...|..+...|++++|+..|+++++++|. +..+|+++|.+|...|++++|+..++++++++|+++.+|+.+|.+
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 290 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGIS 290 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 4556778899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+..+|++++|+..|+++++++|+.
T Consensus 291 ~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 291 CINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHCCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999874
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2.6e-12 Score=98.32 Aligned_cols=100 Identities=20% Similarity=0.256 Sum_probs=95.2
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 333 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 333 (357)
.+...|..++..|++++|+..|.++++..|. +..+++++|.++...|++++|+..+++++..+|+++.+++.+|.++..
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 4567788999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhcccccc
Q 018381 334 LGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 334 lg~~~~A~~~~~~al~l~p~~ 354 (357)
.|++++|++.|+++++.+|++
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~ 102 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRS 102 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC
T ss_pred hcCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999998864
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.40 E-value=7.4e-13 Score=97.41 Aligned_cols=73 Identities=18% Similarity=0.155 Sum_probs=66.8
Q ss_pred cCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 281 GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 281 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.+|+ ++.+++++|.+|+.+|++++|+..++++++++|+++.+|+.+|.+|..+|++++|++.|++++++.|+.
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 4688 999999999999999999999999999999999999999999999999999999999999999998864
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.5e-12 Score=110.53 Aligned_cols=103 Identities=10% Similarity=0.057 Sum_probs=94.5
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCch---HHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChH---HHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP---TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT---AFY 325 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---a~~ 325 (357)
+..+...|..++..|+|++|+..|+++++..|. +. .+++++|.+|+.+|++++|+..++++++.+|+++. +++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPF-GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 456778899999999999999999999999887 53 68999999999999999999999999999999875 899
Q ss_pred HHHHHHHh------------------CCChHHHHHHHHHhhccccccc
Q 018381 326 LQAAALFG------------------LGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 326 ~~g~~~~~------------------lg~~~~A~~~~~~al~l~p~~~ 355 (357)
.+|.+++. +|++++|+..|+++++.+|+..
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~ 130 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQ 130 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCT
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCCh
Confidence 99999986 6899999999999999999864
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.8e-12 Score=116.61 Aligned_cols=101 Identities=17% Similarity=0.245 Sum_probs=98.1
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
++..+...|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 3567789999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p 352 (357)
+..+|++++|+..|+++++++|
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCC
T ss_pred HHHcCChHHHHHHHHHHHhcCC
Confidence 9999999999999999999999
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1e-12 Score=116.03 Aligned_cols=102 Identities=11% Similarity=0.034 Sum_probs=81.2
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHH-------------------------
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEA------------------------- 306 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A------------------------- 306 (357)
...+...|..+...|++++|+..|+++++.+|+ ++.+++++|.++...|++++|
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l 195 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQ-NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIEL 195 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHH
Confidence 344556667777777777777777777777777 777777777777777766665
Q ss_pred ---------HHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 307 ---------LGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 307 ---------~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+..++++++++|+++.+++.+|.+|...|++++|+..|+++++++|++
T Consensus 196 ~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 196 LXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 455666788899999999999999999999999999999999999986
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.38 E-value=2.4e-12 Score=120.19 Aligned_cols=108 Identities=16% Similarity=0.232 Sum_probs=101.8
Q ss_pred hHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHH
Q 018381 246 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 325 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 325 (357)
...+..+..+...|..++..|++++|+..|+++++.+|. +..+|+++|.++..+|++++|+..++++++++|+++.+++
T Consensus 20 ~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 98 (450)
T 2y4t_A 20 FQSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARL 98 (450)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 345677888899999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 326 LQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 326 ~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.+|.+|..+|++++|+..|+++++++|++
T Consensus 99 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 127 (450)
T 2y4t_A 99 QRGHLLLKQGKLDEAEDDFKKVLKSNPSE 127 (450)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTSCCCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999975
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.37 E-value=4.2e-12 Score=108.99 Aligned_cols=101 Identities=12% Similarity=0.043 Sum_probs=57.7
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHh--hCCCChHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQV--ISPDWPTAFYLQAA 329 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~a~~~~g~ 329 (357)
...+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++ .+|.++.+++.+|.
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~ 149 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGL 149 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHH
Confidence 344455555555555555555555555555555 555555555555555555555555555555 55555555555555
Q ss_pred HHHhCCChHHHHHHHHHhhccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
++..+|++++|+..|+++++++|+
T Consensus 150 ~~~~~g~~~~A~~~~~~~~~~~~~ 173 (252)
T 2ho1_A 150 VSLQMKKPAQAKEYFEKSLRLNRN 173 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCcc
Confidence 555555555555555555555554
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.37 E-value=2.3e-12 Score=109.76 Aligned_cols=101 Identities=14% Similarity=0.110 Sum_probs=58.1
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
...+...|..+...|++++|+..|+++++..|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 169 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGME-NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCL 169 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 334445555555555555555555555555555 5555555555555555555555555555555555555555555555
Q ss_pred HhCCChHHHHHHHHHhhccccc
Q 018381 332 FGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al~l~p~ 353 (357)
...|++++|+..|+++++.+|+
T Consensus 170 ~~~~~~~~A~~~~~~~~~~~~~ 191 (243)
T 2q7f_A 170 ANEGMLDEALSQFAAVTEQDPG 191 (243)
T ss_dssp HHHTCCHHHHHHHHHHHHHCTT
T ss_pred HHcCCHHHHHHHHHHHHHhCcc
Confidence 5555555555555555555554
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.2e-12 Score=121.12 Aligned_cols=104 Identities=22% Similarity=0.293 Sum_probs=99.1
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
...+..+...|..+++.|+|++|+..|+++++.+| ++.+|+++|.++..+|++++|+..++++++++|+++.+|+.+|
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 80 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE--DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRA 80 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc--cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 45678899999999999999999999999999998 5889999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccc
Q 018381 329 AALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 329 ~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.++..+|++++|+..|+++++++|.+
T Consensus 81 ~~~~~~g~~~~A~~~~~~~~~~~~~~ 106 (514)
T 2gw1_A 81 SANEGLGKFADAMFDLSVLSLNGDFN 106 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHhhHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999853
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.37 E-value=2e-12 Score=123.49 Aligned_cols=107 Identities=25% Similarity=0.322 Sum_probs=95.9
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHH
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 326 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 326 (357)
.....+..+...|..+++.|+|++|+..|+++++.+|. ++.+|+++|.+|..+|++++|+..++++++++|+++.+++.
T Consensus 20 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 98 (537)
T 3fp2_A 20 QRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLR 98 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHH
Confidence 34567888999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 327 QAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 327 ~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+|.++..+|++++|+..|+ ++.++|+..
T Consensus 99 la~~~~~~g~~~~A~~~~~-~~~~~~~~~ 126 (537)
T 3fp2_A 99 RASANESLGNFTDAMFDLS-VLSLNGDFD 126 (537)
T ss_dssp HHHHHHHHTCHHHHHHHHH-HHC------
T ss_pred HHHHHHHcCCHHHHHHHHH-HHhcCCCCC
Confidence 9999999999999999996 888888743
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.37 E-value=8.9e-13 Score=124.82 Aligned_cols=103 Identities=12% Similarity=0.039 Sum_probs=98.5
Q ss_pred hHHHHHhhhHHhhc---------CChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhc--------CChHHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRA---------KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS--------DMPQEALGDAMQAQ 314 (357)
Q Consensus 252 ~~~~~~~g~~~~~~---------~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~--------~~~~~A~~~~~~al 314 (357)
...+...|..+... |++++|+..|+++++++|. +..+|+++|.+|..+ |++++|+..+++|+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 46778889999999 9999999999999999999 999999999999999 99999999999999
Q ss_pred hhCC---CChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 315 VISP---DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 315 ~~~p---~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+++| +++.+|+++|.+|..+|++++|++.|+++++++|++.
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999 9999999999999999999999999999999999863
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.37 E-value=3.6e-12 Score=108.53 Aligned_cols=105 Identities=13% Similarity=0.095 Sum_probs=99.7
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
.....+...|..++..|++++|+..|+++++..|. +..++.++|.++...|++++|+..++++++.+|+++.+++.+|.
T Consensus 123 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 201 (243)
T 2q7f_A 123 ENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGV 201 (243)
T ss_dssp CSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 34556778899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
++..+|++++|+..|+++++++|++.
T Consensus 202 ~~~~~~~~~~A~~~~~~~~~~~p~~~ 227 (243)
T 2q7f_A 202 TYAYKENREKALEMLDKAIDIQPDHM 227 (243)
T ss_dssp HHHHTTCTTHHHHHHHHHHHHCTTCH
T ss_pred HHHHccCHHHHHHHHHHHHccCcchH
Confidence 99999999999999999999999853
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.36 E-value=3.7e-12 Score=103.34 Aligned_cols=104 Identities=14% Similarity=0.053 Sum_probs=98.3
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
.....+...|..++..|++++|+..|+++++..|. +..++.++|.++...|++++|+..++++++.+|+++.+++.+|.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 118 (186)
T 3as5_A 40 FDVDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGV 118 (186)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHH
Confidence 34566778899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
++..+|++++|+..|+++++.+|++
T Consensus 119 ~~~~~~~~~~A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 119 ALDNLGRFDEAIDSFKIALGLRPNE 143 (186)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHcCcHHHHHHHHHHHHhcCccc
Confidence 9999999999999999999998864
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.5e-12 Score=123.32 Aligned_cols=103 Identities=13% Similarity=-0.001 Sum_probs=98.9
Q ss_pred HHhHHHHHhhhHHhhcCCh-hHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDF-PTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~-~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
..+..+...|..++..|+| ++|+..|+++++++|. +..+|+++|.+|..+|++++|+..+++|++++|+ ..+++.+|
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg 177 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLS 177 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHH
Confidence 4566788999999999999 9999999999999999 9999999999999999999999999999999999 79999999
Q ss_pred HHHHhC---------CChHHHHHHHHHhhcccccc
Q 018381 329 AALFGL---------GMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 329 ~~~~~l---------g~~~~A~~~~~~al~l~p~~ 354 (357)
.++..+ |++++|++.|+++++++|++
T Consensus 178 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 212 (474)
T 4abn_A 178 MVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLD 212 (474)
T ss_dssp HHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCC
Confidence 999999 99999999999999999985
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.36 E-value=3e-12 Score=116.10 Aligned_cols=103 Identities=15% Similarity=0.199 Sum_probs=99.3
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
.+..+...|..+...|++++|+..|+++++++|. +..+|+++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4567788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+..+|++++|+..|+++++++|++
T Consensus 295 ~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 295 CINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999976
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.35 E-value=4.3e-12 Score=115.13 Aligned_cols=103 Identities=14% Similarity=0.112 Sum_probs=98.3
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
+..+...|..++..|++++|+..|+++++.+|. +..+++++|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 142 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSF 142 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 345668899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 018381 332 FGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
..+|++++|+..|+++++++|++.
T Consensus 143 ~~~g~~~~A~~~~~~~~~~~~~~~ 166 (368)
T 1fch_A 143 TNESLQRQACEILRDWLRYTPAYA 166 (368)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTG
T ss_pred HHcCCHHHHHHHHHHHHHhCcCcH
Confidence 999999999999999999999753
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.35 E-value=5e-13 Score=108.79 Aligned_cols=98 Identities=9% Similarity=0.077 Sum_probs=87.9
Q ss_pred HHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH-HHhC
Q 018381 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA-LFGL 334 (357)
Q Consensus 256 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~-~~~l 334 (357)
...+..+...|++++|+..|+++++.+|. +..+|+.+|.+|...|++++|+..++++++++|+++.+++.+|.+ +...
T Consensus 14 ~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~ 92 (177)
T 2e2e_A 14 RDPLHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQA 92 (177)
T ss_dssp STTTCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHT
T ss_pred hhhhhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhc
Confidence 34556678899999999999999999999 999999999999999999999999999999999999999999999 8899
Q ss_pred CCh--HHHHHHHHHhhcccccc
Q 018381 335 GMN--NDAQETLKDGTNLEAKK 354 (357)
Q Consensus 335 g~~--~~A~~~~~~al~l~p~~ 354 (357)
|++ ++|+..|+++++++|++
T Consensus 93 ~~~~~~~A~~~~~~al~~~p~~ 114 (177)
T 2e2e_A 93 SQHMTAQTRAMIDKALALDSNE 114 (177)
T ss_dssp TTCCCHHHHHHHHHHHHHCTTC
T ss_pred CCcchHHHHHHHHHHHHhCCCc
Confidence 999 99999999999999975
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.35 E-value=6.6e-12 Score=111.03 Aligned_cols=93 Identities=12% Similarity=0.084 Sum_probs=87.3
Q ss_pred HHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHH-
Q 018381 261 AAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNND- 339 (357)
Q Consensus 261 ~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~- 339 (357)
.+...|++++|+..|+++++..|. ++.+|+++|.++..+|++++|+..+++|++++|+++.+++++|.++..+|++++
T Consensus 175 l~~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~ea 253 (291)
T 3mkr_A 175 LAAGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEV 253 (291)
T ss_dssp HHHCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHH
T ss_pred HHhCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHH
Confidence 334568999999999999999999 999999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHhhcccccc
Q 018381 340 AQETLKDGTNLEAKK 354 (357)
Q Consensus 340 A~~~~~~al~l~p~~ 354 (357)
|.+.++++++++|++
T Consensus 254 a~~~~~~~~~~~P~~ 268 (291)
T 3mkr_A 254 TNRYLSQLKDAHRSH 268 (291)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhCCCC
Confidence 568889999999986
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.35 E-value=4.5e-12 Score=116.24 Aligned_cols=104 Identities=13% Similarity=0.037 Sum_probs=89.4
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
.....+...|..+.+.|++++|+..|+++++++|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 269 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 347 (388)
T 1w3b_A 269 HFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLAS 347 (388)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 34456677888888888888888888888888888 88888888888888888888888888888888888888888888
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
++...|++++|+..|+++++++|++
T Consensus 348 ~~~~~g~~~~A~~~~~~a~~~~p~~ 372 (388)
T 1w3b_A 348 VLQQQGKLQEALMHYKEAIRISPTF 372 (388)
T ss_dssp HHHTTTCCHHHHHHHHHHHTTCTTC
T ss_pred HHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 8888899999998888888888875
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.34 E-value=6.2e-12 Score=89.98 Aligned_cols=85 Identities=18% Similarity=0.137 Sum_probs=78.9
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
..+..+...|..++..|++++|+..|+++++.+|. +..+++++|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 34566778899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCC
Q 018381 330 ALFGLG 335 (357)
Q Consensus 330 ~~~~lg 335 (357)
++..+|
T Consensus 86 ~~~~~g 91 (91)
T 1na3_A 86 AKQKQG 91 (91)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 988765
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-11 Score=106.30 Aligned_cols=102 Identities=15% Similarity=0.072 Sum_probs=96.2
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhc--------------------------cCCCCchHHHhhHHHHHHhcCChHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFID--------------------------GGTMVSPTVFARRCLCYLLSDMPQE 305 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~--------------------------~~p~~~~~~~~~~a~~~~~~~~~~~ 305 (357)
+..+...|..+...|++++|+..|+++++ .+|. +..++.++|.++...|++++
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPE-KAEEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHhcCHHH
Confidence 67778889999999999999999999998 7777 88899999999999999999
Q ss_pred HHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 306 ALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 306 A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 158 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 206 (258)
T 3uq3_A 158 AVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF 206 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHH
Confidence 9999999999999999999999999999999999999999999999975
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.34 E-value=4e-12 Score=110.35 Aligned_cols=100 Identities=7% Similarity=-0.015 Sum_probs=55.7
Q ss_pred HHHHHhhhHHhhcCChhHHHHHHHHHhccCCC---CchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 253 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM---VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
..+...|..++..|++++|+..|+++++ .|. ....+|.++|.++..+|++++|+..++++++++|+++.+++.+|.
T Consensus 38 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 116 (272)
T 3u4t_A 38 YIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGS 116 (272)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 3444555555555566666666655555 222 012235555555655566666666666666655555555566666
Q ss_pred HHHhCCChHHHHHHHHHhhccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
++..+|++++|+..|+++++++|+
T Consensus 117 ~~~~~~~~~~A~~~~~~al~~~~~ 140 (272)
T 3u4t_A 117 YFYNKGNFPLAIQYMEKQIRPTTT 140 (272)
T ss_dssp HHHHTTCHHHHHHHHGGGCCSSCC
T ss_pred HHHHccCHHHHHHHHHHHhhcCCC
Confidence 666666666666666655555554
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.34 E-value=3.4e-12 Score=110.82 Aligned_cols=101 Identities=17% Similarity=0.218 Sum_probs=92.5
Q ss_pred HHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC----hHHHHHHH
Q 018381 253 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW----PTAFYLQA 328 (357)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----~~a~~~~g 328 (357)
..+...|..++..|++++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++ .|.+ ..+|+.+|
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg 81 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKKYN-SPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYG 81 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCC-CSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHH
Confidence 45678899999999999999999999999999 999999999999999999999999999999 4444 44599999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 018381 329 AALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 329 ~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
.++..+|++++|+..|+++++++|++.
T Consensus 82 ~~~~~~~~~~~A~~~~~~a~~~~~~~~ 108 (272)
T 3u4t_A 82 KILMKKGQDSLAIQQYQAAVDRDTTRL 108 (272)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHHcccHHHHHHHHHHHHhcCcccH
Confidence 999999999999999999999999753
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.33 E-value=3.5e-12 Score=110.63 Aligned_cols=103 Identities=16% Similarity=0.092 Sum_probs=95.6
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCC--CchHHHhhHHHHHHh--------cCChHHHHHHHHHHHhhCCCCh
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM--VSPTVFARRCLCYLL--------SDMPQEALGDAMQAQVISPDWP 321 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~--~~~~~~~~~a~~~~~--------~~~~~~A~~~~~~al~~~p~~~ 321 (357)
...+...|..++..|+|++|+..|+++++..|+ ....+++++|.+++. +|++++|+..++++++.+|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 667889999999999999999999999999885 135789999999999 9999999999999999999998
Q ss_pred HHH-----------------HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 322 TAF-----------------YLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 322 ~a~-----------------~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.++ +.+|.+|+.+|+|++|+..|+++++.+|+.
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 777 899999999999999999999999999974
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.33 E-value=9.6e-12 Score=104.30 Aligned_cols=106 Identities=14% Similarity=-0.028 Sum_probs=91.5
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhc-CChHHHHHHHHHHHh--hCCCChHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS-DMPQEALGDAMQAQV--ISPDWPTAF 324 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~--~~p~~~~a~ 324 (357)
.+.....+...|..+...|++++|+..|+++++.+|. +..++.++|.++... |++++|+..++++++ .+|....++
T Consensus 38 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 116 (225)
T 2vq2_A 38 DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIAN 116 (225)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHH
T ss_pred CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHH
Confidence 3445667778888888999999999999999999988 888899999999999 999999999999988 667778889
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 325 YLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 325 ~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+.+|.++..+|++++|+..|+++++.+|++
T Consensus 117 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 146 (225)
T 2vq2_A 117 LNKGICSAKQGQFGLAEAYLKRSLAAQPQF 146 (225)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999888864
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=7.3e-12 Score=114.85 Aligned_cols=103 Identities=17% Similarity=0.171 Sum_probs=71.3
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
....+...|..+...|++++|+..|.++++++|. +..++.++|.++...|++++|+..++++++++|+++.+|+.+|.+
T Consensus 202 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 280 (388)
T 1w3b_A 202 FLDAYINLGNVLKEARIFDRAVAAYLRALSLSPN-HAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANA 280 (388)
T ss_dssp CHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 3445556666666677777777777777777776 666777777777777777777777777777777777777777777
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+...|++++|+..|+++++++|++
T Consensus 281 ~~~~g~~~~A~~~~~~al~~~p~~ 304 (388)
T 1w3b_A 281 LKEKGSVAEAEDCYNTALRLCPTH 304 (388)
T ss_dssp HHHHSCHHHHHHHHHHHHHHCTTC
T ss_pred HHHcCCHHHHHHHHHHHHhhCccc
Confidence 777777777777777777766654
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.33 E-value=3.2e-12 Score=98.40 Aligned_cols=70 Identities=10% Similarity=-0.046 Sum_probs=67.0
Q ss_pred chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 286 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 286 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
.+.++.++|.++++.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+++|+++++++|++.
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 5678999999999999999999999999999999999999999999999999999999999999999764
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.9e-12 Score=101.59 Aligned_cols=82 Identities=9% Similarity=-0.055 Sum_probs=76.0
Q ss_pred HHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 018381 273 ECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 273 ~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p 352 (357)
..|.++++++|. +..+++++|.+++..|++++|+..+++++.++|+++.+|+.+|.++..+|++++|+.+|+++++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 578899999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc
Q 018381 353 KKH 355 (357)
Q Consensus 353 ~~~ 355 (357)
++.
T Consensus 84 ~~~ 86 (142)
T 2xcb_A 84 NEP 86 (142)
T ss_dssp TCT
T ss_pred CCc
Confidence 864
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=6.4e-12 Score=111.09 Aligned_cols=104 Identities=15% Similarity=0.049 Sum_probs=90.4
Q ss_pred HhHHHHHhhhHHhhc-CChhHHHHHHHHHhccCCCCc------hHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChH-
Q 018381 251 ETLNSKKRGDAAFRA-KDFPTAIECYTHFIDGGTMVS------PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT- 322 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~- 322 (357)
.+..+...|..+... |++++|+.+|++|+++.|. . ..++.++|.++..+|+|++|+..+++++++.|++..
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 194 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQ-DQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLS 194 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTT
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHh-CCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcc
Confidence 456778889999996 9999999999999998875 3 467999999999999999999999999999998654
Q ss_pred ------HHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 323 ------AFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 323 ------a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+|+++|.++..+|++++|+.+|+++++++|+..
T Consensus 195 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 233 (292)
T 1qqe_A 195 QWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA 233 (292)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-----
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Confidence 689999999999999999999999999999753
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.5e-11 Score=110.64 Aligned_cols=101 Identities=16% Similarity=0.222 Sum_probs=94.3
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchH----HHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT----VFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~----~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
.....|..++..|++++|+..|+++++..|. +.. ++.++|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 236 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 314 (359)
T 3ieg_A 236 KLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAE 314 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 3456689999999999999999999999999 774 57789999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
++..+|++++|+..|+++++++|++.
T Consensus 315 ~~~~~g~~~~A~~~~~~a~~~~p~~~ 340 (359)
T 3ieg_A 315 AYLIEEMYDEAIQDYEAAQEHNENDQ 340 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 99999999999999999999999863
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.31 E-value=2.1e-11 Score=104.61 Aligned_cols=99 Identities=13% Similarity=0.018 Sum_probs=52.7
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhc--cCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFID--GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~--~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
.+...|..++..|++++|+..|+++++ ..|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 107 ~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 185 (252)
T 2ho1_A 107 VLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPE-RSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLL 185 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 344445555555555555555555555 4444 4555555555555555555555555555555555555555555555
Q ss_pred HhCCChHHHHHHHHHhhccccc
Q 018381 332 FGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al~l~p~ 353 (357)
..+|++++|+..|+++++.+|+
T Consensus 186 ~~~g~~~~A~~~~~~~~~~~~~ 207 (252)
T 2ho1_A 186 YKEREYVPARQYYDLFAQGGGQ 207 (252)
T ss_dssp HHTTCHHHHHHHHHHHHTTSCC
T ss_pred HHcCCHHHHHHHHHHHHHhCcC
Confidence 5555555555555555555443
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=6.9e-12 Score=111.66 Aligned_cols=106 Identities=14% Similarity=0.093 Sum_probs=95.1
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccC---------CCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGG---------TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD 319 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~---------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 319 (357)
+.....+...|..++..|++++|+..|+++++.. |. ...++.++|.++..+|++++|+..++++++++|+
T Consensus 190 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 268 (330)
T 3hym_B 190 PEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ 268 (330)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred CCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc
Confidence 4456677888999999999999999999999875 55 6789999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 320 WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 320 ~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
++.+++.+|.++..+|++++|++.|+++++++|++.
T Consensus 269 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 304 (330)
T 3hym_B 269 NASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDT 304 (330)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCH
T ss_pred chHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCch
Confidence 999999999999999999999999999999999753
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=9.4e-12 Score=120.41 Aligned_cols=106 Identities=17% Similarity=0.046 Sum_probs=100.3
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+..+..+...|..++..|++++|+..|+++++++|+ +..+++++|.+|..+|++++|+..++++++++|+++.+++.+
T Consensus 19 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 97 (568)
T 2vsy_A 19 RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWL 97 (568)
T ss_dssp --CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 4455677889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
|.+|..+|++++|++.|+++++++|++
T Consensus 98 a~~~~~~g~~~~A~~~~~~al~~~p~~ 124 (568)
T 2vsy_A 98 GHALEDAGQAEAAAAAYTRAHQLLPEE 124 (568)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999975
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.4e-11 Score=109.54 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=98.8
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
.....+...|..+...|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 170 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 248 (327)
T 3cv0_A 170 NDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAV 248 (327)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 34567788899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccc
Q 018381 330 ALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 330 ~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
++..+|++++|++.|+++++++|+
T Consensus 249 ~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 249 SYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHhccHHHHHHHHHHHHHhCCc
Confidence 999999999999999999999998
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-11 Score=108.60 Aligned_cols=101 Identities=5% Similarity=-0.069 Sum_probs=53.0
Q ss_pred hHHHHHhhhHHhhcC-ChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAK-DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
...+...|..++..| ++++|+..|+++++.+|. +..+|.++|.++...|++++|+..++++++++|++..+++.+|.+
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 168 (330)
T 3hym_B 90 PVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKT-YGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLE 168 (330)
T ss_dssp THHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTT-CTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 334444455555555 555555555555555555 555555555555555555555555555555555555555555555
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
+..+|++++|+..|+++++++|+
T Consensus 169 ~~~~~~~~~A~~~~~~al~~~~~ 191 (330)
T 3hym_B 169 YGLTNNSKLAERFFSQALSIAPE 191 (330)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHhhHHHHHHHHHHHHHhCCC
Confidence 55555555555555555555544
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.8e-11 Score=101.48 Aligned_cols=105 Identities=11% Similarity=0.011 Sum_probs=96.4
Q ss_pred HHHhHHHHHhhhHHhhc-CChhHHHHHHHHHhc--cCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHH
Q 018381 249 IQETLNSKKRGDAAFRA-KDFPTAIECYTHFID--GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 325 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~--~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 325 (357)
+.....+...|..++.. |++++|+..|+++++ ..|. +..+++++|.++...|++++|+..++++++.+|+++.+++
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 151 (225)
T 2vq2_A 73 PDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFK 151 (225)
T ss_dssp TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred CCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHH
Confidence 34456678889999999 999999999999999 6676 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhcccc-cc
Q 018381 326 LQAAALFGLGMNNDAQETLKDGTNLEA-KK 354 (357)
Q Consensus 326 ~~g~~~~~lg~~~~A~~~~~~al~l~p-~~ 354 (357)
.+|.++..+|++++|+..|+++++++| ++
T Consensus 152 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 181 (225)
T 2vq2_A 152 ELARTKMLAGQLGDADYYFKKYQSRVEVLQ 181 (225)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999998 54
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.1e-11 Score=112.03 Aligned_cols=99 Identities=12% Similarity=0.022 Sum_probs=92.6
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
.+..+...|..+++.|+|++|+..|+++|+++|. +..+|+++|.+|..+|++++|+.++++|++++|++..+++.+|.+
T Consensus 195 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 273 (336)
T 1p5q_A 195 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVC 273 (336)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 3577889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHH-HHHHHHhhcc
Q 018381 331 LFGLGMNNDA-QETLKDGTNL 350 (357)
Q Consensus 331 ~~~lg~~~~A-~~~~~~al~l 350 (357)
+..+|++++| ...|++.+..
T Consensus 274 ~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 274 QQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 5567777643
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.29 E-value=1.6e-11 Score=109.06 Aligned_cols=104 Identities=11% Similarity=0.018 Sum_probs=98.8
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
....+...|..++..|++++|+..|+++++.+|. +..++..+|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 98 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 98 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHH
Confidence 3455678899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+..+|++++|+..|+++++++|++.
T Consensus 99 ~~~~~~~~~A~~~~~~~~~~~~~~~ 123 (327)
T 3cv0_A 99 HTNEHNANAALASLRAWLLSQPQYE 123 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTTT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCccH
Confidence 9999999999999999999999754
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=3.4e-11 Score=104.36 Aligned_cols=105 Identities=13% Similarity=0.078 Sum_probs=92.7
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCCh-------
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP------- 321 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~------- 321 (357)
+.....+...|..++..|++++|+..|+++++++|. +..+++++|.++..+|++++|+..++++++++|++.
T Consensus 74 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 152 (275)
T 1xnf_A 74 PDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLY 152 (275)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 344567788899999999999999999999999999 999999999999999999999999999999999875
Q ss_pred ---------------------------------------------------------------HHHHHHHHHHHhCCChH
Q 018381 322 ---------------------------------------------------------------TAFYLQAAALFGLGMNN 338 (357)
Q Consensus 322 ---------------------------------------------------------------~a~~~~g~~~~~lg~~~ 338 (357)
.+++.+|.++..+|+++
T Consensus 153 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 232 (275)
T 1xnf_A 153 LAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLD 232 (275)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHH
Confidence 56777888888888888
Q ss_pred HHHHHHHHhhcccccc
Q 018381 339 DAQETLKDGTNLEAKK 354 (357)
Q Consensus 339 ~A~~~~~~al~l~p~~ 354 (357)
+|+..|+++++++|++
T Consensus 233 ~A~~~~~~al~~~p~~ 248 (275)
T 1xnf_A 233 SATALFKLAVANNVHN 248 (275)
T ss_dssp HHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHhCCchh
Confidence 8888888888888864
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.27 E-value=2e-11 Score=97.43 Aligned_cols=104 Identities=13% Similarity=0.006 Sum_probs=93.6
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+.....+...|..++..|++++|+..|.++++++|. +..+++++|.++..+|++++|+..++++++++|++..++..+
T Consensus 43 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~ 121 (166)
T 1a17_A 43 NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKY 121 (166)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4455677888999999999999999999999999999 999999999999999999999999999999999999999555
Q ss_pred H--HHHHhCCChHHHHHHHHHhhcccc
Q 018381 328 A--AALFGLGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 328 g--~~~~~lg~~~~A~~~~~~al~l~p 352 (357)
+ ..+...|++++|++.++++..+.+
T Consensus 122 ~~~~~~~~~~~~~~A~~~~~~~~~~~~ 148 (166)
T 1a17_A 122 QECNKIVKQKAFERAIAGDEHKRSVVD 148 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHhc
Confidence 4 458889999999999998876543
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=1e-11 Score=109.76 Aligned_cols=106 Identities=8% Similarity=-0.181 Sum_probs=95.1
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc------hHHHhhHHHHHHhc-CChHHHHHHHHHHHhhCCCC-
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS------PTVFARRCLCYLLS-DMPQEALGDAMQAQVISPDW- 320 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~~-~~~~~A~~~~~~al~~~p~~- 320 (357)
...+..+.+.|..+...|++++|+.+|++|+++.+. . ..++.++|.+|... |++++|+..+++|+++.|+.
T Consensus 74 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~-~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~ 152 (292)
T 1qqe_A 74 DEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTH-RGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ 152 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCC
Confidence 344678889999999999999999999999988764 2 46899999999996 99999999999999998865
Q ss_pred -----hHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 321 -----PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 321 -----~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
..++.++|.++..+|+|++|+..|+++++++|++.
T Consensus 153 ~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 153 SVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC
Confidence 57899999999999999999999999999998753
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.27 E-value=4.6e-12 Score=119.91 Aligned_cols=107 Identities=14% Similarity=0.036 Sum_probs=95.4
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+..+..+...|..+++.|+|++|+..|+++++++|. ++.+|+++|.+|..+|++++|+..+++|++++|++..++..+
T Consensus 36 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 114 (477)
T 1wao_1 36 NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKY 114 (477)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHH
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4455778889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHH--HHhCCChHHHHHHHH-----------Hhhccccccc
Q 018381 328 AAA--LFGLGMNNDAQETLK-----------DGTNLEAKKH 355 (357)
Q Consensus 328 g~~--~~~lg~~~~A~~~~~-----------~al~l~p~~~ 355 (357)
|.+ +...|++++|++.++ ++++++|++.
T Consensus 115 ~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~ 155 (477)
T 1wao_1 115 QECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYS 155 (477)
T ss_dssp HHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCC
T ss_pred HHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccccc
Confidence 999 889999999999999 8888888753
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.27 E-value=4.1e-11 Score=111.74 Aligned_cols=99 Identities=16% Similarity=0.221 Sum_probs=93.8
Q ss_pred HHHhhhHHhhcCChhHHHHHHHHHhccCCCCch----HHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 255 SKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP----TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 255 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
....|..++..|++++|+..|++++++.|. +. .++.++|.++..+|++++|+..++++++++|+++.+|+.+|.+
T Consensus 260 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 338 (450)
T 2y4t_A 260 LIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEA 338 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 355599999999999999999999999998 74 4899999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+..+|++++|+..|+++++++|++
T Consensus 339 ~~~~~~~~~A~~~~~~al~~~p~~ 362 (450)
T 2y4t_A 339 YLIEEMYDEAIQDYETAQEHNEND 362 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHTTSSSC
T ss_pred HHHhcCHHHHHHHHHHHHHhCcch
Confidence 999999999999999999999985
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.26 E-value=1.8e-11 Score=103.82 Aligned_cols=102 Identities=16% Similarity=0.069 Sum_probs=92.9
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchH---HHhhHHHHHHh------------------cCChHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLL------------------SDMPQEALGDA 310 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~---~~~~~a~~~~~------------------~~~~~~A~~~~ 310 (357)
...+...|..+++.|+|++|+..|+++++..|+ +.. +++++|.++.. .|++++|+..+
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 119 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDF 119 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHH
Confidence 456778899999999999999999999999998 764 89999999886 57999999999
Q ss_pred HHHHhhCCCChHHH-----------------HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 311 MQAQVISPDWPTAF-----------------YLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 311 ~~al~~~p~~~~a~-----------------~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+++++.+|+++.++ +.+|.+|+..|++++|+..|+++++..|+.
T Consensus 120 ~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~ 180 (225)
T 2yhc_A 120 SKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT 180 (225)
T ss_dssp HHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCC
Confidence 99999999998765 678999999999999999999999999875
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.24 E-value=5.5e-11 Score=91.01 Aligned_cols=88 Identities=9% Similarity=-0.034 Sum_probs=82.4
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+.....+...|..++..|++++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|++..+++.+
T Consensus 46 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l 124 (133)
T 2lni_A 46 NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGY 124 (133)
T ss_dssp CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 3445677889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCC
Q 018381 328 AAALFGLGM 336 (357)
Q Consensus 328 g~~~~~lg~ 336 (357)
|.++..+|+
T Consensus 125 ~~~~~~~~~ 133 (133)
T 2lni_A 125 QRCMMAQYN 133 (133)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhcC
Confidence 999988764
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.23 E-value=3.4e-11 Score=89.40 Aligned_cols=69 Identities=17% Similarity=0.133 Sum_probs=67.0
Q ss_pred chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 286 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 286 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
++.+++++|.+++..|+|++|+..+++|++++|+++.+|+++|.++..+|++++|+.+|+++++++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 567899999999999999999999999999999999999999999999999999999999999999986
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=7.3e-11 Score=113.81 Aligned_cols=114 Identities=5% Similarity=-0.117 Sum_probs=104.0
Q ss_pred hhhhhhHHHHHhHHHHHhhhHHhhcCC----------hhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcC--ChHHHHH
Q 018381 241 SFQMWTDQIQETLNSKKRGDAAFRAKD----------FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD--MPQEALG 308 (357)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~--~~~~A~~ 308 (357)
........++....|..++......|+ +++|+..|+++++.+|+ ++.+|++|+.++.+++ ++++|++
T Consensus 52 ~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~ 130 (567)
T 1dce_A 52 TSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELE 130 (567)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHH
T ss_pred HHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHH
Confidence 333445567777888889998888887 99999999999999999 9999999999999999 6799999
Q ss_pred HHHHHHhhCCCChHHHHHHHHHHHhCC-ChHHHHHHHHHhhccccccc
Q 018381 309 DAMQAQVISPDWPTAFYLQAAALFGLG-MNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 309 ~~~~al~~~p~~~~a~~~~g~~~~~lg-~~~~A~~~~~~al~l~p~~~ 355 (357)
.+++++++||.+..||+++|.++..+| .+++|+++++++++.+|+|.
T Consensus 131 ~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~ 178 (567)
T 1dce_A 131 LCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178 (567)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCH
T ss_pred HHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCc
Confidence 999999999999999999999999999 99999999999999999864
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.21 E-value=7.7e-11 Score=104.14 Aligned_cols=105 Identities=10% Similarity=-0.074 Sum_probs=90.6
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHH--HHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRC--LCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a--~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.....+...|..+.+.|++++|+..|+++++.+|+ +.......+ ..+...|++++|+..++++++.+|+++.+|+.+
T Consensus 128 ~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 128 DSLECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 44556778899999999999999999999999998 654333333 233455899999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|.++..+|++++|+..|+++++++|++.
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p~~~ 234 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDSGHP 234 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999863
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.3e-10 Score=94.42 Aligned_cols=83 Identities=10% Similarity=-0.036 Sum_probs=77.9
Q ss_pred CChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC--hHHHHHHHHHHHhCCChHHHHHH
Q 018381 266 KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--PTAFYLQAAALFGLGMNNDAQET 343 (357)
Q Consensus 266 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~~~lg~~~~A~~~ 343 (357)
++..+|+..|+++++.+|+ +..+++++|.++...|++++|+..++++++++|++ +.+++.+|.++..+|++++|+..
T Consensus 88 ~~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~ 166 (176)
T 2r5s_A 88 AAESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASK 166 (176)
T ss_dssp HTSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHH
T ss_pred cccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHH
Confidence 4556789999999999999 99999999999999999999999999999999987 56999999999999999999999
Q ss_pred HHHhhc
Q 018381 344 LKDGTN 349 (357)
Q Consensus 344 ~~~al~ 349 (357)
|+++|.
T Consensus 167 y~~al~ 172 (176)
T 2r5s_A 167 YRRQLY 172 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.4e-10 Score=110.59 Aligned_cols=107 Identities=14% Similarity=0.051 Sum_probs=93.9
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+..+..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+
T Consensus 306 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l 384 (537)
T 3fp2_A 306 NPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFF 384 (537)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 3445667788888899999999999999999999998 888999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|.++..+|++++|+..|+++++++|++.
T Consensus 385 ~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 412 (537)
T 3fp2_A 385 AEILTDRGDFDTAIKQYDIAKRLEEVQE 412 (537)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHhCCHHHHHHHHHHHHHcCCcch
Confidence 9999999999999999999998888653
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.19 E-value=4e-11 Score=91.63 Aligned_cols=70 Identities=13% Similarity=-0.021 Sum_probs=67.4
Q ss_pred chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 286 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 286 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
.+..|.++|.+++..|+|++|+..++++++++|+++.+|+++|.++..+|++++|+.+|+++++++|++.
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 72 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFV 72 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH
Confidence 6778999999999999999999999999999999999999999999999999999999999999999853
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.6e-10 Score=99.38 Aligned_cols=115 Identities=7% Similarity=-0.039 Sum_probs=104.9
Q ss_pred hhhhhhhHHHHHhHHHHHhhhHHhhcC--ChhHHHHHHHHHhccCCCCchHHHhhHHHHH----Hhc---CChHHHHHHH
Q 018381 240 LSFQMWTDQIQETLNSKKRGDAAFRAK--DFPTAIECYTHFIDGGTMVSPTVFARRCLCY----LLS---DMPQEALGDA 310 (357)
Q Consensus 240 l~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~----~~~---~~~~~A~~~~ 310 (357)
+......-.|+....+..++......| ++++++..++++|..+|+ ++.+|+.|+.++ ..+ +++++++..+
T Consensus 55 ~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~ 133 (306)
T 3dra_A 55 ITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPYREFDIL 133 (306)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHH
T ss_pred HHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHHHHHHHH
Confidence 333444556777888999999999988 999999999999999999 999999999999 777 8999999999
Q ss_pred HHHHhhCCCChHHHHHHHHHHHhCCChH--HHHHHHHHhhccccccc
Q 018381 311 MQAQVISPDWPTAFYLQAAALFGLGMNN--DAQETLKDGTNLEAKKH 355 (357)
Q Consensus 311 ~~al~~~p~~~~a~~~~g~~~~~lg~~~--~A~~~~~~al~l~p~~~ 355 (357)
+++++.+|.+..+|++++.++..+|+++ ++++.++++++.||.|.
T Consensus 134 ~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~ 180 (306)
T 3dra_A 134 EAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNN 180 (306)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999 99999999999999864
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.19 E-value=1.3e-10 Score=88.44 Aligned_cols=90 Identities=16% Similarity=0.028 Sum_probs=84.2
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+.....+...|..++..|++++|+..|.++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++.+
T Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l 120 (131)
T 2vyi_A 42 NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNL 120 (131)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHH
Confidence 3445667888999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChH
Q 018381 328 AAALFGLGMNN 338 (357)
Q Consensus 328 g~~~~~lg~~~ 338 (357)
|.++..+|+++
T Consensus 121 ~~~~~~~~~~~ 131 (131)
T 2vyi_A 121 KIAELKLREAP 131 (131)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHhcCC
Confidence 99999999863
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.1e-11 Score=110.22 Aligned_cols=101 Identities=15% Similarity=0.018 Sum_probs=59.5
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH-HH
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA-LF 332 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~-~~ 332 (357)
.+...|..+++.|+|++|+..|+++|+++|. +..+|+++|.+|..+|++++|+.++++|++++|++..++..++.+ ..
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~ 310 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQ 310 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 6788999999999999999999999999999 999999999999999999999999999999999999999999998 45
Q ss_pred hCCChHHHHHHHHHhhccccccc
Q 018381 333 GLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 333 ~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
..+.+++|.+.|++++..+|++.
T Consensus 311 ~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 311 EKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp -----------------------
T ss_pred HHHHHHHHHHHHHHhhCCCCCCC
Confidence 56788999999999999999764
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.18 E-value=7.5e-11 Score=84.18 Aligned_cols=69 Identities=19% Similarity=0.217 Sum_probs=66.8
Q ss_pred chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 286 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 286 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+..+++++|.++...|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 76 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 76 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 678999999999999999999999999999999999999999999999999999999999999999975
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.17 E-value=1.6e-10 Score=102.83 Aligned_cols=105 Identities=8% Similarity=-0.161 Sum_probs=64.9
Q ss_pred HHHHhHHHHHhhhHHh-------hcCCh-------hHHHHHHHHHhc-cCCCCchHHHhhHHHHHHhcCChHHHHHHHHH
Q 018381 248 QIQETLNSKKRGDAAF-------RAKDF-------PTAIECYTHFID-GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQ 312 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~-------~~~~~-------~~A~~~~~~ai~-~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 312 (357)
.+..+..+...|..+. ..|++ ++|+..|++|++ ++|+ +..+|.++|.++...|++++|+..|++
T Consensus 46 ~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~ 124 (308)
T 2ond_A 46 LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNR 124 (308)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTT-CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 3444445555555444 23554 666666666666 5666 666666666666666666666666666
Q ss_pred HHhhCCCChH-HHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 313 AQVISPDWPT-AFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 313 al~~~p~~~~-a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
+++++|+++. +|..+|.++...|++++|+..|++|++++|.
T Consensus 125 al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~ 166 (308)
T 2ond_A 125 LLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 166 (308)
T ss_dssp HHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC
T ss_pred HHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Confidence 6666666665 6666666666666666666666666666554
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.17 E-value=1e-10 Score=113.24 Aligned_cols=104 Identities=16% Similarity=0.135 Sum_probs=92.2
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhcc------CCCCc-hHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDG------GTMVS-PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTA 323 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~-~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a 323 (357)
+...+...|..+.+.|++++|+..|+++++. +|. + ..+|.++|.+|...|++++|+..++++++++|+++.+
T Consensus 474 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 552 (597)
T 2xpi_A 474 DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEK-PWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANV 552 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSG-GGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchh-hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHH
Confidence 4556778888899999999999999999887 555 4 6789999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 324 FYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 324 ~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|+.+|.+|...|++++|++.|+++++++|++.
T Consensus 553 ~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~ 584 (597)
T 2xpi_A 553 HTAIALVYLHKKIPGLAITHLHESLAISPNEI 584 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh
Confidence 99999999999999999999999999999863
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.17 E-value=9.1e-11 Score=101.71 Aligned_cols=104 Identities=11% Similarity=-0.048 Sum_probs=96.1
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhcc--------CCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhh----
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG--------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI---- 316 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---- 316 (357)
+..+..+...|..+...|++++|+..|.+++++ +|. ...++.++|.++..+|++++|+..+++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 566778889999999999999999999999987 466 7889999999999999999999999999999
Q ss_pred ----CCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 317 ----SPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 317 ----~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
.|....+++.+|.++..+|++++|+..|++++++.|+
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999988654
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.4e-10 Score=87.55 Aligned_cols=88 Identities=8% Similarity=-0.097 Sum_probs=77.7
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+..+..+...|..++..|+|++|+..|+++++++|+ ++.+++++|.++..+|++++|+..++++++++|+++......
T Consensus 23 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 101 (117)
T 3k9i_A 23 GKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYK 101 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTH
T ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 4677788899999999999999999999999999999 999999999999999999999999999999999999876544
Q ss_pred HHHHHhCCC
Q 018381 328 AAALFGLGM 336 (357)
Q Consensus 328 g~~~~~lg~ 336 (357)
..+....+.
T Consensus 102 ~ai~~~~~~ 110 (117)
T 3k9i_A 102 QAILFYADK 110 (117)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHHH
Confidence 444444333
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.5e-10 Score=108.75 Aligned_cols=100 Identities=12% Similarity=-0.003 Sum_probs=56.0
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhcc--------CCCCchHHHhhHHHHHHhc--CChHHHHHHHHHHHhhCCCChHH
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDG--------GTMVSPTVFARRCLCYLLS--DMPQEALGDAMQAQVISPDWPTA 323 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~--~~~~~A~~~~~~al~~~p~~~~a 323 (357)
.+.+.|..++..|++++|+.+|++++++ .+. .+.++.++|.++... ++|++|+..+++|++++|+++.+
T Consensus 96 ~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~ 174 (472)
T 4g1t_A 96 TWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIE-SPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEF 174 (472)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCC-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchh-hHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHH
Confidence 3445555666666666666666666543 122 345555555554443 34666666666666666666666
Q ss_pred HHHHHHHHHh---CCChHHHHHHHHHhhcccccc
Q 018381 324 FYLQAAALFG---LGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 324 ~~~~g~~~~~---lg~~~~A~~~~~~al~l~p~~ 354 (357)
++.+|.+++. .+++++|++.|+++++++|++
T Consensus 175 ~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~ 208 (472)
T 4g1t_A 175 TSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDN 208 (472)
T ss_dssp HHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcc
Confidence 6666655332 355556666666666666654
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.1e-10 Score=109.80 Aligned_cols=91 Identities=14% Similarity=0.122 Sum_probs=83.7
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
+..+.+.|..+++.|+|++|+..|+++|+++|. +..+|+++|.+|..+|++++|+.++++|++++|++..++..+|.++
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ 395 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 567889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHH
Q 018381 332 FGLGMNNDAQET 343 (357)
Q Consensus 332 ~~lg~~~~A~~~ 343 (357)
..+|++++|...
T Consensus 396 ~~~~~~~~a~~~ 407 (457)
T 1kt0_A 396 KKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988754
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.14 E-value=8.8e-11 Score=92.76 Aligned_cols=69 Identities=17% Similarity=0.067 Sum_probs=64.2
Q ss_pred hHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC-------ChH-----HHHHHHHHHHhCCChHHHHHHHHHhhcc----
Q 018381 287 PTVFARRCLCYLLSDMPQEALGDAMQAQVISPD-------WPT-----AFYLQAAALFGLGMNNDAQETLKDGTNL---- 350 (357)
Q Consensus 287 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-------~~~-----a~~~~g~~~~~lg~~~~A~~~~~~al~l---- 350 (357)
+..+.++|..++++|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 457899999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---ccccc
Q 018381 351 ---EAKKH 355 (357)
Q Consensus 351 ---~p~~~ 355 (357)
+|++.
T Consensus 91 ~e~~pd~~ 98 (159)
T 2hr2_A 91 GELNQDEG 98 (159)
T ss_dssp CCTTSTHH
T ss_pred ccCCCchH
Confidence 99853
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.9e-10 Score=84.98 Aligned_cols=72 Identities=13% Similarity=0.094 Sum_probs=69.6
Q ss_pred cCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 281 GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 281 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
++|. +..+++++|.+++..|++++|+..++++++++|+++.+++.+|.++..+|++++|++.|+++++++|+
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 4677 88999999999999999999999999999999999999999999999999999999999999999997
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.8e-10 Score=91.21 Aligned_cols=87 Identities=8% Similarity=-0.137 Sum_probs=80.1
Q ss_pred hHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHH
Q 018381 246 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 325 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 325 (357)
...+..+..+...|..++..|+|++|+..|+++++++|. +..+|+++|.+|..+|++++|+..++++++++|++..+|+
T Consensus 39 ~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 117 (164)
T 3sz7_A 39 SIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAM 117 (164)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHH
T ss_pred HhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHH
Confidence 334566778899999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 018381 326 LQAAALFG 333 (357)
Q Consensus 326 ~~g~~~~~ 333 (357)
.+|.+...
T Consensus 118 ~~~l~~~~ 125 (164)
T 3sz7_A 118 KRGLETTK 125 (164)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98876543
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.13 E-value=9.1e-11 Score=89.31 Aligned_cols=68 Identities=15% Similarity=-0.056 Sum_probs=65.1
Q ss_pred HHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 288 TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 288 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
..++++|.+++..|++++|+..++++++++|+++.+|+.+|.++..+|++++|+..|+++++++|++.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 85 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI 85 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 45889999999999999999999999999999999999999999999999999999999999999863
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-10 Score=101.28 Aligned_cols=101 Identities=10% Similarity=-0.028 Sum_probs=93.3
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhcc--------CCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhh----
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG--------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI---- 316 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---- 316 (357)
+..+..+...|..++..|++++|+..|++++++ .|. ...++.++|.++..+|++++|+..+++++.+
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 456677889999999999999999999999976 355 6789999999999999999999999999998
Q ss_pred ----CCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 018381 317 ----SPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNL 350 (357)
Q Consensus 317 ----~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 350 (357)
+|....+++.+|.++..+|++++|+..|++++++
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5888999999999999999999999999999988
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.9e-10 Score=108.80 Aligned_cols=105 Identities=12% Similarity=0.003 Sum_probs=94.4
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchH------HHhhHHHHHHh---cCChHHHHHHHHHHHhhCCC
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT------VFARRCLCYLL---SDMPQEALGDAMQAQVISPD 319 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~------~~~~~a~~~~~---~~~~~~A~~~~~~al~~~p~ 319 (357)
+.....+...|..++..|++++|+..|+++++..|. +.. +++++|.++.. .|++++|+..++++++++|+
T Consensus 369 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~ 447 (514)
T 2gw1_A 369 PEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPR 447 (514)
T ss_dssp TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcc
Confidence 344566778899999999999999999999998887 654 89999999999 99999999999999999999
Q ss_pred ChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 320 WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 320 ~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 448 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 482 (514)
T 2gw1_A 448 SEQAKIGLAQMKLQQEDIDEAITLFEESADLARTM 482 (514)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999975
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=2.5e-10 Score=100.61 Aligned_cols=88 Identities=9% Similarity=-0.042 Sum_probs=78.2
Q ss_pred HHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC--hHHHHHHHHHHHhCCChH
Q 018381 261 AAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--PTAFYLQAAALFGLGMNN 338 (357)
Q Consensus 261 ~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~~~lg~~~ 338 (357)
.+...++.++|+..|+++++.+|+ +..+++++|.+|...|++++|+..++++++.+|++ ..++.++|.++..+|+.+
T Consensus 194 ~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 272 (287)
T 3qou_A 194 ELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGD 272 (287)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTC
T ss_pred HHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCC
Confidence 344455555566667777888999 99999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHhhc
Q 018381 339 DAQETLKDGTN 349 (357)
Q Consensus 339 ~A~~~~~~al~ 349 (357)
+|+..|++++.
T Consensus 273 ~a~~~~r~al~ 283 (287)
T 3qou_A 273 ALASXYRRQLY 283 (287)
T ss_dssp HHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 99999999985
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=1.9e-10 Score=110.86 Aligned_cols=110 Identities=10% Similarity=0.031 Sum_probs=101.8
Q ss_pred hhHHHHHhHHHHHhhhHHhhcC--ChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcC-ChHHHHHHHHHHHhhCCCCh
Q 018381 245 WTDQIQETLNSKKRGDAAFRAK--DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD-MPQEALGDAMQAQVISPDWP 321 (357)
Q Consensus 245 ~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~ 321 (357)
....+.....|..++-...+.+ +|++|+++++++++++|. +..+|++|+.++..+| .+++++++++++|+.+|++.
T Consensus 100 l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~ 178 (567)
T 1dce_A 100 LRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178 (567)
T ss_dssp HHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCH
T ss_pred HHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCc
Confidence 3456677788999999999999 779999999999999999 9999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHhC--------------CChHHHHHHHHHhhccccccc
Q 018381 322 TAFYLQAAALFGL--------------GMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 322 ~a~~~~g~~~~~l--------------g~~~~A~~~~~~al~l~p~~~ 355 (357)
.||+++|.++..+ +++++|++++++|++++|++.
T Consensus 179 saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~ 226 (567)
T 1dce_A 179 SSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 226 (567)
T ss_dssp HHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCS
T ss_pred cHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCc
Confidence 9999999999986 568999999999999999874
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.1e-10 Score=101.07 Aligned_cols=104 Identities=11% Similarity=-0.018 Sum_probs=95.2
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhcc--------CCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhh----
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG--------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI---- 316 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---- 316 (357)
+..+..+...|..++..|++++|+..|++++++ .|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 228 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHER 228 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 566777889999999999999999999999987 666 7789999999999999999999999999974
Q ss_pred ---------------------------------------------CCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccc
Q 018381 317 ---------------------------------------------SPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLE 351 (357)
Q Consensus 317 ---------------------------------------------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 351 (357)
+|..+.+++.+|.+|..+|++++|++.|++++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 229 EFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp HHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 57788999999999999999999999999999998
Q ss_pred cc
Q 018381 352 AK 353 (357)
Q Consensus 352 p~ 353 (357)
|+
T Consensus 309 ~~ 310 (311)
T 3nf1_A 309 KQ 310 (311)
T ss_dssp C-
T ss_pred hc
Confidence 85
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.2e-10 Score=103.53 Aligned_cols=104 Identities=9% Similarity=0.008 Sum_probs=90.8
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCC-----chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC----
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-----SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---- 320 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 320 (357)
..+..+...|..+.. |++++|+.+|++|+++.+.. ...++.++|.+|..+|+|++|+..+++++++.|+.
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 192 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYP 192 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChh
Confidence 346677888999988 99999999999999887641 15689999999999999999999999999987654
Q ss_pred --hHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 321 --PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 321 --~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
..+++.+|.++..+|++++|+.+|++++ ++|+..
T Consensus 193 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 193 TCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 3488899999999999999999999999 999753
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.4e-10 Score=95.99 Aligned_cols=97 Identities=11% Similarity=0.060 Sum_probs=83.7
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
...+...|..++..|+|++|+..|+++++++|. +..+++++|.+|..+|++++|+..++++++++|++..++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 456678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHH-HHHHHhhc
Q 018381 332 FGLGMNNDAQ-ETLKDGTN 349 (357)
Q Consensus 332 ~~lg~~~~A~-~~~~~al~ 349 (357)
..+++++++. ..|.+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999888 55555544
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.3e-10 Score=102.50 Aligned_cols=101 Identities=12% Similarity=0.108 Sum_probs=87.8
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhc-------cCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC---
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFID-------GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--- 320 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~-------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--- 320 (357)
.+..+...|..++..|+|++|+.+|+++++ ..+. ...+++|+|.+|..+|+|++|+..+++|+++.+..
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~ 232 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF-DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcH
Confidence 344678899999999999999999999994 2222 45689999999999999999999999999887544
Q ss_pred ---hHHHHHHHHHHHhCCC-hHHHHHHHHHhhcccc
Q 018381 321 ---PTAFYLQAAALFGLGM-NNDAQETLKDGTNLEA 352 (357)
Q Consensus 321 ---~~a~~~~g~~~~~lg~-~~~A~~~~~~al~l~p 352 (357)
+.+|+++|.++..+|+ +++|++.|++|+++..
T Consensus 233 ~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~ 268 (293)
T 3u3w_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 8899999999999995 6999999999998754
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=4.3e-11 Score=103.88 Aligned_cols=60 Identities=13% Similarity=0.034 Sum_probs=50.6
Q ss_pred chhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCceeecCCCCCeeeCCCCCeEEecCCccccc
Q 018381 5 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS-SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 72 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH-~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 72 (357)
+|.+++.. .++..+..++.||+.||.||| +.+ |+||||||+|||++. .++|+|||++...
T Consensus 159 ~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g-ivHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 159 TLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE-LVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp BHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC-EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred cHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 56655421 235577899999999999999 898 999999999999997 9999999998754
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.10 E-value=3.9e-10 Score=103.03 Aligned_cols=96 Identities=15% Similarity=0.088 Sum_probs=90.5
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHH
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 326 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 326 (357)
..+..+..+...|..+++.|+|++|+..|+++++++|. ++.+|+++|.+|..+|++++|+.++++|++++|++..++..
T Consensus 268 ~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~ 346 (370)
T 1ihg_A 268 LQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAE 346 (370)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 34566778899999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHH
Q 018381 327 QAAALFGLGMNNDAQET 343 (357)
Q Consensus 327 ~g~~~~~lg~~~~A~~~ 343 (357)
++.++..++++++|.+.
T Consensus 347 l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 347 LLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988754
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.10 E-value=8.1e-10 Score=97.80 Aligned_cols=137 Identities=10% Similarity=-0.062 Sum_probs=108.5
Q ss_pred hhHHHHHHHHhhcCCCchhhHhHhhhhhhhHHHHHhHHHHHhhhHH----hhc---CChhHHHHHHHHHhccCCCCchHH
Q 018381 217 DLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAA----FRA---KDFPTAIECYTHFIDGGTMVSPTV 289 (357)
Q Consensus 217 ~~~~~~~il~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~A~~~~~~ai~~~p~~~~~~ 289 (357)
-+..-+.++..++...- ..+-..........+.....+..++... ... +++++++.+++++++.+|. +..+
T Consensus 69 aWn~R~~~L~~l~~~~~-~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk-ny~a 146 (306)
T 3dra_A 69 IWIYRFNILKNLPNRNL-YDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK-NHHV 146 (306)
T ss_dssp HHHHHHHHHHTCTTSCH-HHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT-CHHH
T ss_pred HHHHHHHHHHHcccccH-HHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC-CHHH
Confidence 34445566665552111 1111222223344566666777777766 555 7999999999999999999 9999
Q ss_pred HhhHHHHHHhcCChH--HHHHHHHHHHhhCCCChHHHHHHHHHHHhCCC------hHHHHHHHHHhhccccccc
Q 018381 290 FARRCLCYLLSDMPQ--EALGDAMQAQVISPDWPTAFYLQAAALFGLGM------NNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 290 ~~~~a~~~~~~~~~~--~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~------~~~A~~~~~~al~l~p~~~ 355 (357)
|++|+.++..+|+++ ++++.++++|+.+|.+..||++++.++..+|+ ++++++.++++++++|++.
T Consensus 147 W~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~ 220 (306)
T 3dra_A 147 WSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNP 220 (306)
T ss_dssp HHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCH
T ss_pred HHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999 99999999999999999999999999999998 9999999999999999874
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.09 E-value=3.3e-10 Score=100.73 Aligned_cols=96 Identities=13% Similarity=-0.023 Sum_probs=79.2
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHH-hcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYL-LSDMPQEALGDAMQAQVISPDWPTAFYLQAAALF 332 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 332 (357)
.+...|..+.+.|++++|+..|++|++.+|. ...+|...+.... ..|++++|+..+++|++++|+++.+|..+|..+.
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 6777788888888888888888888888887 7777776665543 3688888888888888888888888888888888
Q ss_pred hCCChHHHHHHHHHhhcc
Q 018381 333 GLGMNNDAQETLKDGTNL 350 (357)
Q Consensus 333 ~lg~~~~A~~~~~~al~l 350 (357)
.+|++++|+..|+++++.
T Consensus 215 ~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 215 HLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp TTCCHHHHHHHHHHHHHS
T ss_pred HCCCHHHHHHHHHHHHhc
Confidence 888888888888888884
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.5e-10 Score=92.67 Aligned_cols=90 Identities=10% Similarity=-0.055 Sum_probs=80.2
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCCh-HHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP-TAFYL 326 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-~a~~~ 326 (357)
.+..+..+...|..+++.|+|++|+..|+++|+++|. +..+|+++|.+|..+|++++|+.++++|++++|++. .....
T Consensus 59 ~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~ 137 (162)
T 3rkv_A 59 DRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVARE 137 (162)
T ss_dssp HHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 4455677889999999999999999999999999999 999999999999999999999999999999999999 66777
Q ss_pred HHHHHHhCCChH
Q 018381 327 QAAALFGLGMNN 338 (357)
Q Consensus 327 ~g~~~~~lg~~~ 338 (357)
++.+...+++++
T Consensus 138 l~~~~~~~~~~~ 149 (162)
T 3rkv_A 138 MKIVTERRAEKK 149 (162)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 777776655443
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.09 E-value=4.4e-10 Score=108.76 Aligned_cols=96 Identities=9% Similarity=-0.127 Sum_probs=47.5
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 333 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 333 (357)
.+...|..+.+.|++++|+..|+++++..|. +..+|+.++.+|...|++++|+..++++++++|+++.+|+.+|.++..
T Consensus 409 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 487 (597)
T 2xpi_A 409 AWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFN 487 (597)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 3344444444444444444444444444444 444444555555555555555555555555555555555555555555
Q ss_pred CCChHHHHHHHHHhhcc
Q 018381 334 LGMNNDAQETLKDGTNL 350 (357)
Q Consensus 334 lg~~~~A~~~~~~al~l 350 (357)
.|++++|++.|++++++
T Consensus 488 ~g~~~~A~~~~~~~~~~ 504 (597)
T 2xpi_A 488 KSDMQTAINHFQNALLL 504 (597)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHh
Confidence 55555555555555444
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.7e-10 Score=102.57 Aligned_cols=104 Identities=10% Similarity=-0.044 Sum_probs=91.4
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCC-----CchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC----
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM-----VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---- 320 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 320 (357)
..+..+...|..+...|++++|+.+|++++++.+. ....++.++|.+|.. |++++|+..+++|+++.|..
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~ 152 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLR 152 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChh
Confidence 44667888899999999999999999999987432 124689999999999 99999999999999998754
Q ss_pred --hHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 321 --PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 321 --~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
..+++++|.+|..+|+|++|+..|++++++.|++
T Consensus 153 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 153 QAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 6789999999999999999999999999988764
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.08 E-value=1.6e-10 Score=91.08 Aligned_cols=76 Identities=14% Similarity=-0.039 Sum_probs=67.8
Q ss_pred HHHHHhHHHHHhhhHHhhcCCh----------hHHHHHHHHHhccCCCCchHHHhhHHHHHHhcC-----------ChHH
Q 018381 247 DQIQETLNSKKRGDAAFRAKDF----------PTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD-----------MPQE 305 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~----------~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-----------~~~~ 305 (357)
..|.++..+...|..+...+++ ++|+..|++||+++|+ ...+|+++|.+|..+| ++++
T Consensus 31 l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~e 109 (158)
T 1zu2_A 31 SNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDL 109 (158)
T ss_dssp HCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhccHHH
Confidence 3566778888889888888775 5999999999999999 9999999999999885 8999
Q ss_pred HHHHHHHHHhhCCCChHH
Q 018381 306 ALGDAMQAQVISPDWPTA 323 (357)
Q Consensus 306 A~~~~~~al~~~p~~~~a 323 (357)
|+..|++|++++|++...
T Consensus 110 A~~~~~kAl~l~P~~~~y 127 (158)
T 1zu2_A 110 ATQFFQQAVDEQPDNTHY 127 (158)
T ss_dssp HHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHhCCCCHHH
Confidence 999999999999998644
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.9e-10 Score=97.92 Aligned_cols=106 Identities=9% Similarity=-0.127 Sum_probs=92.2
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc-hHHHhhHHHHHHhcCChHHHHHHHHHHHhhC--CC-ChH
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS-PTVFARRCLCYLLSDMPQEALGDAMQAQVIS--PD-WPT 322 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--p~-~~~ 322 (357)
..+... .....|..+++.|+|++|+..|++++...+... ..+++++|.++..+|++++|+..+++++.-. |. .+.
T Consensus 131 ~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~d 209 (282)
T 4f3v_A 131 AGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARA 209 (282)
T ss_dssp TTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHH
T ss_pred cCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHH
Confidence 344555 778889999999999999999999988642201 4589999999999999999999999998654 66 778
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 323 AFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 323 a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
+++++|.++..+|+.++|...|+++++.+|+
T Consensus 210 a~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 210 IAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999997
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.07 E-value=2.7e-10 Score=89.86 Aligned_cols=101 Identities=16% Similarity=0.141 Sum_probs=76.8
Q ss_pred HHHHHhhhHHhhcCChhHHHHHHHHHhccCCCC-----chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC------h
Q 018381 253 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-----SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW------P 321 (357)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~ 321 (357)
..+...|..++..|++++|+..|++++++.+.. ...++.++|.++..+|++++|+..+++++++.+.. .
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 356777888888888888888888888754430 14577888888888888888888888888765433 3
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 322 TAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 322 ~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
.+++.+|.++..+|++++|+..+++++++..+
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 56778888888888888888888888877654
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.07 E-value=2.5e-10 Score=83.62 Aligned_cols=85 Identities=7% Similarity=0.053 Sum_probs=71.7
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCCh--HHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP--TAFYL 326 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~--~a~~~ 326 (357)
+..+..+...|..++..|+|++|+..|+++++++|. +..+|+++|.+|..+|++++|+..+++++++.|+.. .+...
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~ 82 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSE 82 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHH
Confidence 455677889999999999999999999999999999 999999999999999999999999999999987543 33344
Q ss_pred HHHHHHhC
Q 018381 327 QAAALFGL 334 (357)
Q Consensus 327 ~g~~~~~l 334 (357)
+..++...
T Consensus 83 l~~~l~~~ 90 (100)
T 3ma5_A 83 LQDAKLKA 90 (100)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 44444433
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.07 E-value=5.1e-10 Score=86.40 Aligned_cols=74 Identities=11% Similarity=0.019 Sum_probs=69.0
Q ss_pred ccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 280 DGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 280 ~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
..+|. ++..++++|.+++..|+|++|+..+++++.++|+++.+|+.+|.++..+|++++|+..|+++++++|++
T Consensus 3 ~~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 76 (137)
T 3q49_B 3 HMKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS 76 (137)
T ss_dssp ---CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh
Confidence 35667 889999999999999999999999999999999999999999999999999999999999999999975
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.07 E-value=4.5e-10 Score=99.61 Aligned_cols=103 Identities=13% Similarity=0.099 Sum_probs=94.1
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc----hHHHhhHHHHHHhcCChHHHHHHHHHHHhh------CCCC
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS----PTVFARRCLCYLLSDMPQEALGDAMQAQVI------SPDW 320 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~ 320 (357)
....+...|..++..|++++|+..|+++++..|. + ..++.++|.++...|++++|+..+++++++ .|..
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 82 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE 82 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHH
Confidence 3456778899999999999999999999999998 7 468999999999999999999999999988 5677
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 321 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 321 ~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+.+++.+|.++..+|++++|+..|++++++.|+.
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999999999987753
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.06 E-value=8.1e-10 Score=79.65 Aligned_cols=71 Identities=17% Similarity=-0.012 Sum_probs=66.7
Q ss_pred CCCCchHHHhhHHHHHHhcCC---hHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 282 GTMVSPTVFARRCLCYLLSDM---PQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 282 ~p~~~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
+|+ ++.++..+|.+++..++ .++|...+++|++++|+++.+++.+|.+++..|+|++|+..|+++++.+|+
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 577 99999999999986666 799999999999999999999999999999999999999999999999997
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.06 E-value=2.7e-10 Score=82.94 Aligned_cols=66 Identities=17% Similarity=0.098 Sum_probs=63.1
Q ss_pred HhhHHHHHHhcCChHHHHHHHHHHHhhCCCChH-HHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 290 FARRCLCYLLSDMPQEALGDAMQAQVISPDWPT-AFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 290 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
.+++|.+++..|++++|+..++++++++|+++. +|+.+|.++..+|++++|++.|+++++++|++.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 467899999999999999999999999999999 999999999999999999999999999999864
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.06 E-value=3.6e-10 Score=104.07 Aligned_cols=103 Identities=13% Similarity=0.081 Sum_probs=95.6
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCch----HHHhhHHHHHHhcCChHHHHHHHHHHHhh------CC
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP----TVFARRCLCYLLSDMPQEALGDAMQAQVI------SP 318 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p 318 (357)
+..+..+...|..++..|+|++|+..|++++++.|. +. .+|+++|.+|..+|++++|+..+++++++ +|
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCch
Confidence 455677788999999999999999999999999998 76 58999999999999999999999999998 68
Q ss_pred CChHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 018381 319 DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 319 ~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p 352 (357)
..+.+++.+|.++..+|++++|+..|++++++.+
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 157 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLAR 157 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999998844
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=99.06 E-value=1.2e-09 Score=94.97 Aligned_cols=99 Identities=14% Similarity=0.067 Sum_probs=87.3
Q ss_pred HHHhHHHHHhhhHHhh----cCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCC
Q 018381 249 IQETLNSKKRGDAAFR----AKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDW 320 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~ 320 (357)
+..+..+...|..+.. .+++++|+..|+++++.+ ++.+++++|.+|.. .+++++|+..+++|++. ++
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~~ 109 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--KY 109 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TC
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--CC
Confidence 4455677888999999 999999999999999874 78899999999999 99999999999999988 48
Q ss_pred hHHHHHHHHHHHh----CCChHHHHHHHHHhhcccc
Q 018381 321 PTAFYLQAAALFG----LGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 321 ~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l~p 352 (357)
+.+++.+|.+|.. .|++++|+..|++++++++
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc
Confidence 9999999999999 9999999999999998764
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.06 E-value=4.5e-10 Score=99.08 Aligned_cols=101 Identities=12% Similarity=0.090 Sum_probs=87.9
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHh---ccCCCCch----HHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC----
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFI---DGGTMVSP----TVFARRCLCYLLSDMPQEALGDAMQAQVISPD---- 319 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai---~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---- 319 (357)
.+..+...|..++..|+|++|+.+|++++ +..|. +. .+++|+|.+|..+|+|++|+..+++|+++.++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~-~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~ 232 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc-cccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcH
Confidence 35577889999999999999999999999 44554 32 68999999999999999999999999988643
Q ss_pred --ChHHHHHHHHHHHhCCChHHH-HHHHHHhhcccc
Q 018381 320 --WPTAFYLQAAALFGLGMNNDA-QETLKDGTNLEA 352 (357)
Q Consensus 320 --~~~a~~~~g~~~~~lg~~~~A-~~~~~~al~l~p 352 (357)
.+.+|+++|.++..+|++++| ..+|++|+++..
T Consensus 233 ~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~ 268 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp SSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 278999999999999999999 788999987653
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.7e-09 Score=95.30 Aligned_cols=100 Identities=9% Similarity=-0.001 Sum_probs=86.4
Q ss_pred HHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc------hHHHhhHHHHHHhcCChHHHHHHHHHHH---hhCCCCh--
Q 018381 253 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS------PTVFARRCLCYLLSDMPQEALGDAMQAQ---VISPDWP-- 321 (357)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al---~~~p~~~-- 321 (357)
......|..+...|++++|+..|.++++..+. . ..+++++|.+|..+|++++|+..+++|+ +..|++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~ 194 (293)
T 2qfc_A 116 QWQYYVAAYVLKKVDYEYCILELKKLLNQQLT-GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCC-SSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccc
Confidence 33455778888999999999999999986554 2 5689999999999999999999999999 5566643
Q ss_pred --HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 322 --TAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 322 --~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
.+++++|.+|..+|+|++|+..|++++++.++
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 69999999999999999999999999988754
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.05 E-value=4e-10 Score=103.19 Aligned_cols=106 Identities=17% Similarity=0.169 Sum_probs=94.0
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCC-----chHHHhhHHHHHHhcCChHHHHHHHHHHHh-----hC
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-----SPTVFARRCLCYLLSDMPQEALGDAMQAQV-----IS 317 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~ 317 (357)
.+..+..+...|..+...|+|++|+..|.+++++.+.. ...+++++|.+|..+|++++|+..+++|++ .+
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 34556778889999999999999999999999875531 225899999999999999999999999999 56
Q ss_pred -CCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 318 -PDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 318 -p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
|..+.+++.+|.++..+|++++|+..|++++++.++
T Consensus 260 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 260 LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999998553
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=2.2e-09 Score=96.10 Aligned_cols=115 Identities=8% Similarity=-0.049 Sum_probs=103.9
Q ss_pred hhhhhhhHHHHHhHHHHHhhhHHhhcC-ChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhc-C-ChHHHHHHHHHHHhh
Q 018381 240 LSFQMWTDQIQETLNSKKRGDAAFRAK-DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS-D-MPQEALGDAMQAQVI 316 (357)
Q Consensus 240 l~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~-~-~~~~A~~~~~~al~~ 316 (357)
+......-.++....+..++......| ++++++..++++|..+|+ ++.+|+.|+.++..+ + +++++++.+++++++
T Consensus 76 lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~ 154 (349)
T 3q7a_A 76 LTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLP 154 (349)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSS
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Confidence 334444556777888899999998888 599999999999999999 999999999999998 8 999999999999999
Q ss_pred CCCChHHHHHHHHHHHhCCChH--------HHHHHHHHhhccccccc
Q 018381 317 SPDWPTAFYLQAAALFGLGMNN--------DAQETLKDGTNLEAKKH 355 (357)
Q Consensus 317 ~p~~~~a~~~~g~~~~~lg~~~--------~A~~~~~~al~l~p~~~ 355 (357)
+|.+..+|+.++.++..+|+++ ++++.++++++.+|.|.
T Consensus 155 dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~ 201 (349)
T 3q7a_A 155 DPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNN 201 (349)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCH
T ss_pred CCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999998 99999999999999864
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.04 E-value=2.3e-10 Score=100.53 Aligned_cols=104 Identities=9% Similarity=-0.014 Sum_probs=89.2
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChH-----
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT----- 322 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~----- 322 (357)
.+..+..+...|..++..|++++|+..|+++++++|. +..+++++|.+|..+|++++|+..++++++++|+++.
T Consensus 34 ~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~ 112 (281)
T 2c2l_A 34 NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 112 (281)
T ss_dssp CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSH
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHH
Confidence 4556777889999999999999999999999999999 9999999999999999999999999999999987631
Q ss_pred --------------------------HHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 323 --------------------------AFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 323 --------------------------a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
....++. +..|++++|++.|+++++++|++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~--l~~~~~~~A~~~~~~al~~~p~~ 168 (281)
T 2c2l_A 113 IPSALRIAKKKRWNSIEERRIHQESELHSYLTR--LIAAERERELEECQRNHEGHEDD 168 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHH--HHHHHHHHHHTTTSGGGTTTSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHHHHHHHHhhhccccch
Confidence 1111222 23689999999999999999974
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.5e-09 Score=96.84 Aligned_cols=108 Identities=5% Similarity=-0.122 Sum_probs=91.6
Q ss_pred HHHHHhHHHHHhhhHHhhcCC----------hhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCC--hHHHHHHHHHHH
Q 018381 247 DQIQETLNSKKRGDAAFRAKD----------FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM--PQEALGDAMQAQ 314 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~--~~~A~~~~~~al 314 (357)
-.|.....+..++......+. +++++.++++++..+|. ++.+|++|+.++..+++ +++++..+++++
T Consensus 59 ~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l 137 (331)
T 3dss_A 59 ANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFL 137 (331)
T ss_dssp TCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHH
T ss_pred HCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHHH
Confidence 345555666666666655444 78999999999999999 99999999999999884 899999999999
Q ss_pred hhCCCChHHHHHHHHHHHhCCC-hHHHHHHHHHhhccccccc
Q 018381 315 VISPDWPTAFYLQAAALFGLGM-NNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 315 ~~~p~~~~a~~~~g~~~~~lg~-~~~A~~~~~~al~l~p~~~ 355 (357)
+++|.+..||++++.++..+|+ +++++++++++++.+|.|.
T Consensus 138 ~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~ 179 (331)
T 3dss_A 138 EADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 179 (331)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCH
T ss_pred HhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCH
Confidence 9999999999999999999998 5899999999999999864
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.03 E-value=5.5e-10 Score=102.21 Aligned_cols=102 Identities=13% Similarity=0.099 Sum_probs=93.5
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc----hHHHhhHHHHHHhcCChHHHHHHHHHHHhh------CCCCh
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS----PTVFARRCLCYLLSDMPQEALGDAMQAQVI------SPDWP 321 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~ 321 (357)
+..+...|..++..|++++|+..|++++++.|. + ..++.++|.++...|++++|+..+++|+.+ .|..+
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 456678899999999999999999999999998 7 468999999999999999999999999987 56678
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 322 TAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 322 ~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.+++.+|.++..+|++++|+..|++++++.|+.
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 120 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 120 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999988764
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=8.2e-10 Score=98.45 Aligned_cols=109 Identities=10% Similarity=0.040 Sum_probs=99.8
Q ss_pred hHHHHHhHHHHHhhhHHhhcC--ChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCC-hHHHHHHHHHHHhhCCCChH
Q 018381 246 TDQIQETLNSKKRGDAAFRAK--DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM-PQEALGDAMQAQVISPDWPT 322 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~~~p~~~~ 322 (357)
...+.....+..++-.....+ ++++++.+++++++.+|. +..+|++|+.+...+|. +++++++++++|+.+|++..
T Consensus 102 ~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~S 180 (331)
T 3dss_A 102 RVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYS 180 (331)
T ss_dssp HHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHH
T ss_pred HhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHH
Confidence 445667778888888888877 489999999999999999 99999999999999999 59999999999999999999
Q ss_pred HHHHHHHHHHhC--------------CChHHHHHHHHHhhccccccc
Q 018381 323 AFYLQAAALFGL--------------GMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 323 a~~~~g~~~~~l--------------g~~~~A~~~~~~al~l~p~~~ 355 (357)
||++++.++..+ +.++++++++++++.++|++.
T Consensus 181 AW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~ 227 (331)
T 3dss_A 181 SWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 227 (331)
T ss_dssp HHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 999999999988 568999999999999999874
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.4e-09 Score=95.75 Aligned_cols=102 Identities=10% Similarity=-0.030 Sum_probs=93.0
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhcc--------CCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhC--
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG--------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS-- 317 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-- 317 (357)
.+..+..+...|..++..|++++|+..|.+++++ .|. ...++.++|.++...|++++|+..+++++++.
T Consensus 65 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 65 HPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 4566778889999999999999999999999986 355 67899999999999999999999999999884
Q ss_pred ------CCChHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 018381 318 ------PDWPTAFYLQAAALFGLGMNNDAQETLKDGTNL 350 (357)
Q Consensus 318 ------p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 350 (357)
|....+++.+|.++..+|++++|+..|++++++
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 777889999999999999999999999999987
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.02 E-value=4.8e-10 Score=92.54 Aligned_cols=106 Identities=12% Similarity=-0.049 Sum_probs=80.3
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhcc---CCC---CchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC--
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG---GTM---VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD-- 319 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-- 319 (357)
.+..+..+...|..+...|++++|+..|.+++++ .++ ....++.++|.++..+|++++|+..+++++++.+.
T Consensus 62 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 141 (203)
T 3gw4_A 62 HTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQAD 141 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc
Confidence 4455667778888888888888888888888876 332 13457888888888888888888888888865432
Q ss_pred C----hHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 320 W----PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 320 ~----~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
+ ..++..+|.++..+|++++|+..|++++++..+
T Consensus 142 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 142 DQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 2 234578888888888888888888888876544
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.01 E-value=3.1e-09 Score=79.78 Aligned_cols=86 Identities=17% Similarity=0.128 Sum_probs=79.7
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
+.....+...|..++..|++++|+..|+++++..|. +..++.++|.++...|++++|+..++++++++|+++.++..+|
T Consensus 40 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 118 (125)
T 1na0_A 40 PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLG 118 (125)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 344566788899999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCC
Q 018381 329 AALFGLG 335 (357)
Q Consensus 329 ~~~~~lg 335 (357)
.++..+|
T Consensus 119 ~~~~~~g 125 (125)
T 1na0_A 119 NAKQKQG 125 (125)
T ss_dssp HHHHHHC
T ss_pred HHHHhcc
Confidence 9987654
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=6.3e-09 Score=80.95 Aligned_cols=81 Identities=11% Similarity=0.015 Sum_probs=76.3
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
...+...|..++..|++++|+..|+++++++|. +..+++++|.++..+|++++|+..++++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 677888999999999999999999999999999 9999999999999999999999999999999999999999888775
Q ss_pred Hh
Q 018381 332 FG 333 (357)
Q Consensus 332 ~~ 333 (357)
..
T Consensus 144 ~~ 145 (148)
T 2dba_A 144 GP 145 (148)
T ss_dssp CS
T ss_pred hh
Confidence 44
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=6.2e-10 Score=104.51 Aligned_cols=106 Identities=11% Similarity=0.003 Sum_probs=91.2
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhc-------------------CChHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS-------------------DMPQEALG 308 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~-------------------~~~~~A~~ 308 (357)
.+.....+...|..+...|++++|+..|.++++.+|+ ++.+++++|.+|... +.+++|+.
T Consensus 243 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 321 (472)
T 4g1t_A 243 APGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVA 321 (472)
T ss_dssp CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHH
Confidence 4455667788899999999999999999999999999 999999999887643 34678888
Q ss_pred HHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 309 DAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 309 ~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.++++++++|.++.+++.+|.++..+|++++|+..|+++++++|+.
T Consensus 322 ~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~ 367 (472)
T 4g1t_A 322 HLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTP 367 (472)
T ss_dssp HHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCC
Confidence 8999999999999999999999999999999999999998887753
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.01 E-value=6.9e-10 Score=97.88 Aligned_cols=100 Identities=8% Similarity=-0.046 Sum_probs=85.2
Q ss_pred HHHhhhHHhhcCChhHHHHHHHHHhccCCCCc-----hHHHhhHHHHHHhcCChHHHHHHHHHHHh-------hCCCChH
Q 018381 255 SKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS-----PTVFARRCLCYLLSDMPQEALGDAMQAQV-------ISPDWPT 322 (357)
Q Consensus 255 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~-------~~p~~~~ 322 (357)
....|..+...|++++|+..|.+++++.+... ..+++++|.+|..+|++++|+..+++|++ ..+..+.
T Consensus 118 ~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 197 (293)
T 3u3w_A 118 QYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVK 197 (293)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 34578888889999999999999998654411 23799999999999999999999999994 2344566
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 323 AFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 323 a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+++++|.+|..+|+|++|+..+++|+++.++.
T Consensus 198 ~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 198 VRYNHAKALYLDSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999987754
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.00 E-value=9.5e-10 Score=85.70 Aligned_cols=87 Identities=9% Similarity=0.035 Sum_probs=78.1
Q ss_pred hhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcC---ChHHHHHHHHHHHhhC-C-CChHHHHHHHHHHHhCCChHHHHH
Q 018381 268 FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD---MPQEALGDAMQAQVIS-P-DWPTAFYLQAAALFGLGMNNDAQE 342 (357)
Q Consensus 268 ~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~a~~~~g~~~~~lg~~~~A~~ 342 (357)
...+.+.|.+.++.++. +..+.+++|.++.+.+ ++++||..++..++.+ | +..+++|++|.+++++|+|++|++
T Consensus 14 l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~ 92 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 92 (152)
T ss_dssp HHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHH
Confidence 45677888888888887 9999999999999988 6779999999999998 7 678999999999999999999999
Q ss_pred HHHHhhccccccc
Q 018381 343 TLKDGTNLEAKKH 355 (357)
Q Consensus 343 ~~~~al~l~p~~~ 355 (357)
+++++|+++|+|.
T Consensus 93 y~~~lL~ieP~n~ 105 (152)
T 1pc2_A 93 YVRGLLQTEPQNN 105 (152)
T ss_dssp HHHHHHHHCTTCH
T ss_pred HHHHHHhcCCCCH
Confidence 9999999999873
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.00 E-value=6e-10 Score=102.01 Aligned_cols=99 Identities=9% Similarity=-0.051 Sum_probs=45.0
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCC------chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCCh----
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV------SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP---- 321 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---- 321 (357)
+..+...|..++..|++++|+..|.+|+++.+.. ...++.++|.+|..+|++++|+..+++|+++.+...
T Consensus 143 a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 222 (383)
T 3ulq_A 143 AEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQL 222 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHH
Confidence 3444444444444444444444444444432210 123444444555555555555555555444433222
Q ss_pred --HHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 018381 322 --TAFYLQAAALFGLGMNNDAQETLKDGTNL 350 (357)
Q Consensus 322 --~a~~~~g~~~~~lg~~~~A~~~~~~al~l 350 (357)
.+++++|.+|..+|++++|+..|++++++
T Consensus 223 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 253 (383)
T 3ulq_A 223 MGRTLYNIGLCKNSQSQYEDAIPYFKRAIAV 253 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 24444555555555555555555554444
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.99 E-value=9.4e-10 Score=86.69 Aligned_cols=105 Identities=8% Similarity=0.010 Sum_probs=90.8
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCC-----CchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC---
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM-----VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--- 320 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--- 320 (357)
...+..+...|..++..|++++|+..|.+++++.+. ....++.++|.++..+|++++|+..+++++++.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 345677788999999999999999999999975331 123589999999999999999999999999887654
Q ss_pred ---hHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 321 ---PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 321 ---~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
..+++.+|.++..+|++++|+..+++++++.++
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999987543
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=4e-09 Score=94.51 Aligned_cols=91 Identities=11% Similarity=-0.038 Sum_probs=85.4
Q ss_pred hcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcC-ChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhC-C-ChHHH
Q 018381 264 RAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD-MPQEALGDAMQAQVISPDWPTAFYLQAAALFGL-G-MNNDA 340 (357)
Q Consensus 264 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~l-g-~~~~A 340 (357)
+.+..++|+..++++|+++|+ +.++|+.|+.++..+| .+++++..++++|..+|++..+|+.++.++..+ + +++++
T Consensus 66 ~~e~se~AL~lt~~~L~~nP~-~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~E 144 (349)
T 3q7a_A 66 KEEKSERALELTEIIVRMNPA-HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSE 144 (349)
T ss_dssp TTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHH
T ss_pred hCCCCHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHH
Confidence 344557899999999999999 9999999999999999 599999999999999999999999999999998 8 99999
Q ss_pred HHHHHHhhccccccc
Q 018381 341 QETLKDGTNLEAKKH 355 (357)
Q Consensus 341 ~~~~~~al~l~p~~~ 355 (357)
++.++++++++|+|.
T Consensus 145 L~~~~k~L~~dpkNy 159 (349)
T 3q7a_A 145 IEYIHGSLLPDPKNY 159 (349)
T ss_dssp HHHHHHHTSSCTTCH
T ss_pred HHHHHHHHHhCCCCH
Confidence 999999999999863
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=100.05 Aligned_cols=105 Identities=12% Similarity=0.041 Sum_probs=93.6
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCC-----CCchHHHhhHHHHHHhcCChHHHHHHHHHHHh-----hCC
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGT-----MVSPTVFARRCLCYLLSDMPQEALGDAMQAQV-----ISP 318 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-----~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~p 318 (357)
...+..+...|..+...|+|++|+..|.+++++.+ .....++.++|.+|..+|++++|+..+++|++ .+|
T Consensus 179 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 258 (378)
T 3q15_A 179 IRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPD 258 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGG
T ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCCh
Confidence 34567788899999999999999999999998532 11346899999999999999999999999999 889
Q ss_pred CChHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 319 DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 319 ~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
..+.+++.+|.++..+|++++|+..|++++++.++
T Consensus 259 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 259 LLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999998654
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.97 E-value=6.1e-09 Score=77.40 Aligned_cols=84 Identities=12% Similarity=-0.036 Sum_probs=77.7
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+.....+...|..++..|++++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.++..+
T Consensus 34 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 112 (118)
T 1elw_A 34 DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGL 112 (118)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 3445667888999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 018381 328 AAALF 332 (357)
Q Consensus 328 g~~~~ 332 (357)
+.+..
T Consensus 113 ~~~~~ 117 (118)
T 1elw_A 113 QNMEA 117 (118)
T ss_dssp HHHHH
T ss_pred HHhhc
Confidence 88753
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.4e-09 Score=101.06 Aligned_cols=106 Identities=8% Similarity=-0.055 Sum_probs=88.7
Q ss_pred hhHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhc-----cCCC--CchHHHhhHHHHHHhcCChHHHHHHHHHHHhhC
Q 018381 245 WTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFID-----GGTM--VSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS 317 (357)
Q Consensus 245 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~-----~~p~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 317 (357)
+.+..+.+....+.+..+..+|+|++|+..|+++++ +.|+ .-...+.|+|.+|..+|+|++|+..+++++++.
T Consensus 302 v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~ 381 (490)
T 3n71_A 302 VKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGY 381 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 344455566777888888999999999999999996 3444 034689999999999999999999999999653
Q ss_pred -----CCC---hHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 018381 318 -----PDW---PTAFYLQAAALFGLGMNNDAQETLKDGTNL 350 (357)
Q Consensus 318 -----p~~---~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 350 (357)
|++ +..++++|.+|..+|+|++|+..|++|+++
T Consensus 382 ~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 382 MKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 554 468999999999999999999999999975
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.92 E-value=5.6e-09 Score=90.70 Aligned_cols=98 Identities=19% Similarity=0.116 Sum_probs=86.3
Q ss_pred hHHHHHhhhHHhh----cCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCChHH
Q 018381 252 TLNSKKRGDAAFR----AKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWPTA 323 (357)
Q Consensus 252 ~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a 323 (357)
...+...|..+.. .+++++|+..|+++++. . +..+++++|.+|.. .+++++|+..++++++.+| +.+
T Consensus 146 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~--~-~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a 220 (273)
T 1ouv_A 146 GDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--K-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GGG 220 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHH
Confidence 4456677888887 89999999999999987 3 67889999999999 9999999999999999866 889
Q ss_pred HHHHHHHHHh----CCChHHHHHHHHHhhcccccc
Q 018381 324 FYLQAAALFG----LGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 324 ~~~~g~~~~~----lg~~~~A~~~~~~al~l~p~~ 354 (357)
++.+|.+|.. .+++++|+++|+++++++|++
T Consensus 221 ~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~ 255 (273)
T 1ouv_A 221 CFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 255 (273)
T ss_dssp HHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHH
Confidence 9999999999 999999999999999998864
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.89 E-value=2.3e-09 Score=80.34 Aligned_cols=86 Identities=9% Similarity=-0.077 Sum_probs=72.4
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC--hHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--PTAFYL 326 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~ 326 (357)
+..+..+...|..++..|++++|+..|+++++++|. +..+|+++|.+|..+|++++|+..++++++++|+. ..+...
T Consensus 16 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 94 (115)
T 2kat_A 16 TDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKE 94 (115)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHH
Confidence 344567788999999999999999999999999999 99999999999999999999999999999999854 444444
Q ss_pred HHHHHHhCC
Q 018381 327 QAAALFGLG 335 (357)
Q Consensus 327 ~g~~~~~lg 335 (357)
+...+..+|
T Consensus 95 l~~~l~~l~ 103 (115)
T 2kat_A 95 LQVFLRRLA 103 (115)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 544444433
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.88 E-value=2.3e-09 Score=98.08 Aligned_cols=102 Identities=8% Similarity=0.003 Sum_probs=63.8
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCch------HHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC----
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP------TVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---- 320 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~------~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 320 (357)
.+..+...|..++..|++++|+..|++++++.+. .. .++.++|.++..+|++++|+..+++++++.|..
T Consensus 186 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 264 (406)
T 3sf4_A 186 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE-FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 264 (406)
T ss_dssp HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCch
Confidence 3445556666666666666666666666655443 22 266666666666666666666666666665554
Q ss_pred --hHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 321 --PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 321 --~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
..+++.+|.++..+|++++|+..|++++++.++
T Consensus 265 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 299 (406)
T 3sf4_A 265 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 299 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh
Confidence 556666666666666666666666666665443
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.88 E-value=2.3e-09 Score=98.68 Aligned_cols=104 Identities=12% Similarity=0.008 Sum_probs=84.9
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchH------HHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC--
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT------VFARRCLCYLLSDMPQEALGDAMQAQVISPDW-- 320 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~------~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-- 320 (357)
+..+..+...|..++..|++++|+..|++++++.+. ... ++.++|.+|..+|++++|+..+++++++.+..
T Consensus 220 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 298 (411)
T 4a1s_A 220 GAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGE 298 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC
Confidence 334556777888888899999999999999887664 333 78888999999999999999999988887754
Q ss_pred ----hHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 321 ----PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 321 ----~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
..+++.+|.++..+|++++|+..|++++++.++
T Consensus 299 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 335 (411)
T 4a1s_A 299 REVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQE 335 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 678888899999999999999999988887654
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.88 E-value=4.3e-09 Score=86.74 Aligned_cols=102 Identities=10% Similarity=0.019 Sum_probs=92.3
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhc------cCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhh---CC---
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFID------GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI---SP--- 318 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---~p--- 318 (357)
.+..+...|..++..|++++|+..|+++++ ..+. ...++.++|.++..+|++++|+..+++++++ .+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 103 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDP 103 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccH
Confidence 456677889999999999999999999998 8998 9999999999999999999999999999998 34
Q ss_pred -CChHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 319 -DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 319 -~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
....+++.+|.++..+|++++|+..|++++++.++
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 139 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQ 139 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 34678999999999999999999999999987543
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.87 E-value=7.8e-09 Score=86.64 Aligned_cols=96 Identities=15% Similarity=-0.003 Sum_probs=73.3
Q ss_pred HhHHHHHhhhHHhhcC----ChhHHHHHHHHHhccCCCCchHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCC--CC
Q 018381 251 ETLNSKKRGDAAFRAK----DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISP--DW 320 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~----~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p--~~ 320 (357)
.+..+...|..+.. + ++++|+..|+++++. . ++.+++++|.+|.. .+++++|+..+++|++.+| ++
T Consensus 49 ~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~--g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~ 124 (212)
T 3rjv_A 49 DGDALALLAQLKIR-NPQQADYPQARQLAEKAVEA--G-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAA 124 (212)
T ss_dssp CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHH
T ss_pred CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcch
Confidence 45556667777766 5 788888888888653 4 67778888888877 7788888888888888777 45
Q ss_pred hHHHHHHHHHHHh----CCChHHHHHHHHHhhcc
Q 018381 321 PTAFYLQAAALFG----LGMNNDAQETLKDGTNL 350 (357)
Q Consensus 321 ~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l 350 (357)
+.+++++|.+|.. .+++++|+..|++++++
T Consensus 125 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 125 VDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 8888888888888 77888888888888776
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.85 E-value=2.1e-08 Score=76.26 Aligned_cols=83 Identities=12% Similarity=-0.048 Sum_probs=74.3
Q ss_pred HHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc---hHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 253 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
..+...|..++..|+|++|+..|+++++..|+ + +.+++++|.++..+|++++|+..++++++.+|+++.+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 56778899999999999999999999999999 8 8889999999999999999999999999999999998877776
Q ss_pred HHHhCCC
Q 018381 330 ALFGLGM 336 (357)
Q Consensus 330 ~~~~lg~ 336 (357)
+-...++
T Consensus 119 l~~l~~~ 125 (129)
T 2xev_A 119 LQSIRLG 125 (129)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 6555544
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=7.6e-09 Score=96.05 Aligned_cols=97 Identities=11% Similarity=-0.039 Sum_probs=80.9
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhc-----cCCCCc---hHHHhhHHHHHHhcCChHHHHHHHHHHHhh-----CCC-
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFID-----GGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVI-----SPD- 319 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~-----~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~- 319 (357)
...+.+......|+|++|+..|+++++ +.|+ + +..+.|+|.+|..+|+|++|+..+++++++ .|+
T Consensus 300 ~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~-Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H 378 (433)
T 3qww_A 300 NVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDS-NVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYS 378 (433)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTT-SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChh-chHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 344445555677899999999999996 4454 4 357999999999999999999999999965 344
Q ss_pred --ChHHHHHHHHHHHhCCChHHHHHHHHHhhccc
Q 018381 320 --WPTAFYLQAAALFGLGMNNDAQETLKDGTNLE 351 (357)
Q Consensus 320 --~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 351 (357)
-+..++++|.+|..+|+|++|+..|++|+++-
T Consensus 379 p~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 379 LNVASMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999763
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.83 E-value=4e-09 Score=93.39 Aligned_cols=97 Identities=16% Similarity=0.120 Sum_probs=44.3
Q ss_pred HHHhhhHHhhcCChhHHHHHHHHHhccCCCCc------hHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC------hH
Q 018381 255 SKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS------PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW------PT 322 (357)
Q Consensus 255 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~ 322 (357)
+...|..+...|++++|+..|++++++.+. . ..++.++|.++..+|++++|+..+++++++.+.. ..
T Consensus 226 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 304 (338)
T 3ro2_A 226 YSNLGNAYIFLGEFETASEYYKKTLLLARQ-LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGR 304 (338)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 334444444444555555555444443332 2 3344444455555555555555555554444333 22
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 018381 323 AFYLQAAALFGLGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 323 a~~~~g~~~~~lg~~~~A~~~~~~al~l~p 352 (357)
+++.+|.++..+|++++|+..|++++++.+
T Consensus 305 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 334 (338)
T 3ro2_A 305 ACWSLGNAYTALGNHDQAMHFAEKHLEISR 334 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 444445555555555555555555544443
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.81 E-value=2.9e-08 Score=83.10 Aligned_cols=101 Identities=11% Similarity=-0.087 Sum_probs=89.1
Q ss_pred HhHHHHHhhhHHhh----cCChhHHHHHHHHHhccCCC-CchHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCCh
Q 018381 251 ETLNSKKRGDAAFR----AKDFPTAIECYTHFIDGGTM-VSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWP 321 (357)
Q Consensus 251 ~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~-~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~ 321 (357)
.+......|..+.. .+++++|+..|+++++..+. ..+.+++++|.+|.. .+++++|+..+++|+++ |+++
T Consensus 84 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~ 162 (212)
T 3rjv_A 84 SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTG 162 (212)
T ss_dssp CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTT
T ss_pred CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCH
Confidence 45566778888887 89999999999999999883 048999999999999 89999999999999999 8889
Q ss_pred HHHHHHHHHHHhC-C-----ChHHHHHHHHHhhcccc
Q 018381 322 TAFYLQAAALFGL-G-----MNNDAQETLKDGTNLEA 352 (357)
Q Consensus 322 ~a~~~~g~~~~~l-g-----~~~~A~~~~~~al~l~p 352 (357)
.+++++|.+|... | ++++|+..|++|++...
T Consensus 163 ~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 163 YAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp HHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 9999999999764 3 99999999999998743
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.80 E-value=2.6e-08 Score=90.94 Aligned_cols=99 Identities=15% Similarity=0.116 Sum_probs=64.1
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCC-----CchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC-------Ch
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTM-----VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD-------WP 321 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-------~~ 321 (357)
.+...|..++..|+|++|+..|.+|+++.+. ..+.+++++|.+|..+|+++.|+..+++|+++.+. .+
T Consensus 103 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 182 (378)
T 3q15_A 103 SLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTI 182 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHH
Confidence 3455666777777777777777777654221 13456777777777777777777777777765432 24
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 018381 322 TAFYLQAAALFGLGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 322 ~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p 352 (357)
.+++.+|.++..+|++++|++.|++|+++.+
T Consensus 183 ~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 213 (378)
T 3q15_A 183 QSLFVIAGNYDDFKHYDKALPHLEAALELAM 213 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 4666777777777777777777777776543
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.79 E-value=4e-08 Score=87.98 Aligned_cols=101 Identities=13% Similarity=0.073 Sum_probs=77.9
Q ss_pred hHHHHHhhhHHhhcC---ChhHHHHHHHHHhccCCCCchHHHhh------------------------------------
Q 018381 252 TLNSKKRGDAAFRAK---DFPTAIECYTHFIDGGTMVSPTVFAR------------------------------------ 292 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~------------------------------------ 292 (357)
+-.+.-+|..++..+ ++.+|+.+|++||+++|+ .+.+|..
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~-~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~ 274 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPE-FTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELN 274 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCC
Confidence 344445555554433 346777777777777776 6655543
Q ss_pred --------HHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 293 --------RCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 293 --------~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+|.++...|++++|+..+++|+.++|+ +.+|..+|.++...|++++|++.|++|+.++|..
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 444555679999999999999999975 6789999999999999999999999999999964
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=98.78 E-value=2e-09 Score=97.69 Aligned_cols=51 Identities=18% Similarity=0.232 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC----------CeEEecCCcccccC
Q 018381 22 MRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----------NPRLSCFGLMKNSR 73 (357)
Q Consensus 22 ~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~----------~~kl~Dfg~~~~~~ 73 (357)
....++.||+.+|.+||..| ||||||||.|||++++| .+.|+||+.+....
T Consensus 206 ~~~~l~~qll~~l~~lH~~g-IVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 206 DPASLYADLIALILRLAKHG-LIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred HHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 34678899999999999999 99999999999998776 38999999876443
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.78 E-value=1e-08 Score=77.71 Aligned_cols=69 Identities=17% Similarity=0.025 Sum_probs=66.1
Q ss_pred chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 286 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 286 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.+..++.+|.+++..|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 567899999999999999999999999999999999999999999999999999999999999998864
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.77 E-value=4.5e-08 Score=72.04 Aligned_cols=77 Identities=10% Similarity=-0.028 Sum_probs=68.9
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccC-------CCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGG-------TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAF 324 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 324 (357)
+......|..++..|+|..|+.-|++|++.. +. ...++.++|.|++++|+++.|+..+++|++++|++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 3456788999999999999999999999753 34 678999999999999999999999999999999999998
Q ss_pred HHHHH
Q 018381 325 YLQAA 329 (357)
Q Consensus 325 ~~~g~ 329 (357)
.+++.
T Consensus 84 ~n~~~ 88 (104)
T 2v5f_A 84 GNLKY 88 (104)
T ss_dssp HHHHH
T ss_pred hhHHH
Confidence 88874
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.76 E-value=3.1e-08 Score=94.74 Aligned_cols=107 Identities=7% Similarity=-0.180 Sum_probs=86.7
Q ss_pred hHHHHHhHHHHHhhhHHhh-------cCChh-------HHHHHHHHHhc-cCCCCchHHHhhHHHHHHhcCChHHHHHHH
Q 018381 246 TDQIQETLNSKKRGDAAFR-------AKDFP-------TAIECYTHFID-GGTMVSPTVFARRCLCYLLSDMPQEALGDA 310 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~-------~~~~~-------~A~~~~~~ai~-~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~ 310 (357)
...+..+..+...|..+.. .|+++ +|+..|++|++ ..|+ +..+|.++|.++...|++++|+..+
T Consensus 266 ~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~ 344 (530)
T 2ooe_A 266 LVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIY 344 (530)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 3455667777777877765 68877 88889999987 7888 8888989888888889999999999
Q ss_pred HHHHhhCCCCh-HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 311 MQAQVISPDWP-TAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 311 ~~al~~~p~~~-~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
+++++++|+++ .+|...|.++...|++++|++.|++|++..|.
T Consensus 345 ~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 345 NRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp HHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred HHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 99998888875 58888888888888888888888888877664
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.9e-08 Score=87.22 Aligned_cols=94 Identities=12% Similarity=0.088 Sum_probs=83.9
Q ss_pred HHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC--hHHHHHHHHHHHh
Q 018381 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--PTAFYLQAAALFG 333 (357)
Q Consensus 256 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~~~ 333 (357)
...|..+...|+|++|.+.|+.++...|. +. +++.+|.++++.++|++|+..+++++...+.. ..+++++|.++..
T Consensus 106 LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~ 183 (282)
T 4f3v_A 106 MGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAAN 183 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH
Confidence 35678889999999999999999999998 77 99999999999999999999999988864222 4589999999999
Q ss_pred CCChHHHHHHHHHhhccc
Q 018381 334 LGMNNDAQETLKDGTNLE 351 (357)
Q Consensus 334 lg~~~~A~~~~~~al~l~ 351 (357)
+|++++|+..|++++...
T Consensus 184 LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 184 LALFTEAERRLTEANDSP 201 (282)
T ss_dssp TTCHHHHHHHHHHHHTST
T ss_pred CCCHHHHHHHHHHHhcCC
Confidence 999999999999998543
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.72 E-value=1.1e-07 Score=73.75 Aligned_cols=90 Identities=8% Similarity=-0.082 Sum_probs=83.5
Q ss_pred hhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 018381 258 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 333 (357)
Q Consensus 258 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 333 (357)
.|..+...+.+++|+..|+++.+. . ++.+++++|.+|.. .+++++|+..+++|.+. +++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 778888888999999999999997 4 88999999999999 89999999999999987 889999999999999
Q ss_pred ----CCChHHHHHHHHHhhcccc
Q 018381 334 ----LGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 334 ----lg~~~~A~~~~~~al~l~p 352 (357)
.+++++|++.|++|.++..
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~ 128 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGS 128 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTC
T ss_pred CCCCCcCHHHHHHHHHHHHHCCC
Confidence 9999999999999998743
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=2.3e-08 Score=92.86 Aligned_cols=98 Identities=11% Similarity=0.015 Sum_probs=82.6
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhcc-----CCCCc---hHHHhhHHHHHHhcCChHHHHHHHHHHHhhC-----C
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDG-----GTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVIS-----P 318 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-----p 318 (357)
+..+......+..+|+|++|+..|++++++ .|+ + ...+.|+|.+|..+|+|++|+..+++++++. |
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~-h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~ 365 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDI-NIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPG 365 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTT-SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCcc-chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCC
Confidence 344555666788899999999999999964 344 3 3589999999999999999999999999653 4
Q ss_pred CC---hHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 018381 319 DW---PTAFYLQAAALFGLGMNNDAQETLKDGTNL 350 (357)
Q Consensus 319 ~~---~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 350 (357)
++ +..++++|.+|..+|+|++|+..|++|+++
T Consensus 366 ~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 366 SHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 44 458999999999999999999999999975
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.69 E-value=6.2e-08 Score=71.28 Aligned_cols=70 Identities=11% Similarity=-0.135 Sum_probs=63.7
Q ss_pred chHHHhhHHHHHHhcCChHHHHHHHHHHHhhC-------CCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 286 SPTVFARRCLCYLLSDMPQEALGDAMQAQVIS-------PDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 286 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-------p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
++.-.+.+|..++..|+|..|+.++++|++.. +..+..+..+|.+++++|++++|+..++++++++|++.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 55678899999999999999999999999863 45688999999999999999999999999999999863
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.66 E-value=5.4e-08 Score=93.08 Aligned_cols=102 Identities=9% Similarity=-0.025 Sum_probs=60.1
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCch-HHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP-TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
....+...|....+.|++++|...|+++++..|. ++ .+|.+++.++...|++++|+..+++|++..|.....+...|.
T Consensus 320 ~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~ 398 (530)
T 2ooe_A 320 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAAL 398 (530)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCcccc-CchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHH
Confidence 3445566666677777888888888888877776 64 467766666555555555555555555555554444444443
Q ss_pred H-HHhCCChHHHHHHHHHhhccccc
Q 018381 330 A-LFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 330 ~-~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
+ +...|++++|...|+++++.+|+
T Consensus 399 ~~~~~~~~~~~A~~~~e~al~~~p~ 423 (530)
T 2ooe_A 399 MEYYCSKDKSVAFKIFELGLKKYGD 423 (530)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCChhHHHHHHHHHHHHCCC
Confidence 3 22355555555555555555554
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.62 E-value=1.1e-07 Score=86.35 Aligned_cols=100 Identities=14% Similarity=0.013 Sum_probs=87.8
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccC--------CCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC----
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGG--------TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD---- 319 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---- 319 (357)
+..+...|..++..|++++|+..|++++++. |. ...++.++|.++...|++++|+..+++++.+.+.
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 171 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQ 171 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGG
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcH
Confidence 4456778999999999999999999999764 33 4568899999999999999999999999998875
Q ss_pred -ChHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 018381 320 -WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 320 -~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p 352 (357)
...++..+|.++...|++++|+..+++++++.+
T Consensus 172 ~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 172 QQLQCLAMLIQCSLARGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp GGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 356899999999999999999999999998744
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.62 E-value=5.2e-08 Score=88.54 Aligned_cols=102 Identities=9% Similarity=0.075 Sum_probs=87.2
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCC-c----hHHHhhHHHHHHhcCChHHHHHHHHHHHhhC--------C
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-S----PTVFARRCLCYLLSDMPQEALGDAMQAQVIS--------P 318 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--------p 318 (357)
+..+...|..++..|++++|+..|.+++++.+.. + ..++.++|.++...|++++|+..+++++++. |
T Consensus 53 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~ 132 (373)
T 1hz4_A 53 IVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLP 132 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTST
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCc
Confidence 3456678899999999999999999999865541 1 2347899999999999999999999999875 4
Q ss_pred CChHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 319 DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 319 ~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
....++..+|.+++..|++++|+..+++++++.|+
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 133 MHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 45678889999999999999999999999988775
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1.8e-07 Score=80.56 Aligned_cols=87 Identities=14% Similarity=0.032 Sum_probs=79.2
Q ss_pred ChhHHHHHHHHHhccCCC-CchHHHhhHHHHHHhc-----CChHHHHHHHHHHHhhCCCC-hHHHHHHHHHHHh-CCChH
Q 018381 267 DFPTAIECYTHFIDGGTM-VSPTVFARRCLCYLLS-----DMPQEALGDAMQAQVISPDW-PTAFYLQAAALFG-LGMNN 338 (357)
Q Consensus 267 ~~~~A~~~~~~ai~~~p~-~~~~~~~~~a~~~~~~-----~~~~~A~~~~~~al~~~p~~-~~a~~~~g~~~~~-lg~~~ 338 (357)
...+|...+++||+++|. .+..+|.-+|..|... |+.++|.+++++||+++|+. ..+++..|..++. .|+++
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 357899999999999997 2345999999999995 99999999999999999975 9999999999988 59999
Q ss_pred HHHHHHHHhhccccc
Q 018381 339 DAQETLKDGTNLEAK 353 (357)
Q Consensus 339 ~A~~~~~~al~l~p~ 353 (357)
+|.+.++++++.+|.
T Consensus 258 ~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 258 GFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHcCCCC
Confidence 999999999999987
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.52 E-value=2.7e-07 Score=66.23 Aligned_cols=72 Identities=6% Similarity=-0.125 Sum_probs=63.5
Q ss_pred HHhHHHHHhhhHHhhcCC---hhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChH
Q 018381 250 QETLNSKKRGDAAFRAKD---FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT 322 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~ 322 (357)
.++..+...|..++..++ .++|...++++++++|+ +..+++.+|..+++.|+|++|+..++++++.+|..+.
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 345667778888875555 79999999999999999 9999999999999999999999999999999998443
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.46 E-value=7.5e-07 Score=84.23 Aligned_cols=96 Identities=11% Similarity=-0.042 Sum_probs=82.9
Q ss_pred hHHHHHhhhHHhhcC---ChhHHHHHHHHHhccCCCCchHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCChHHH
Q 018381 252 TLNSKKRGDAAFRAK---DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWPTAF 324 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~ 324 (357)
...+...|..++..| ++++|+..|+++++. . ++.+++++|.+|.. .+++++|+..+++|++. +++.++
T Consensus 328 ~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~ 402 (490)
T 2xm6_A 328 ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSAAQ 402 (490)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHH
T ss_pred HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHHHH
Confidence 345566777777655 889999999999987 4 78899999999999 89999999999999886 479999
Q ss_pred HHHHHHHHh----CCChHHHHHHHHHhhcccc
Q 018381 325 YLQAAALFG----LGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 325 ~~~g~~~~~----lg~~~~A~~~~~~al~l~p 352 (357)
+++|.+|.. .+++++|+..|++|++.+|
T Consensus 403 ~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 403 VQLGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 999999998 8999999999999999884
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.8e-07 Score=88.19 Aligned_cols=103 Identities=11% Similarity=0.004 Sum_probs=87.6
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhc-----cCCC--CchHHHhhHHHHHHhcCChHHHHHHHHHHHhh---
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFID-----GGTM--VSPTVFARRCLCYLLSDMPQEALGDAMQAQVI--- 316 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~-----~~p~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--- 316 (357)
..+..+..+.+.|..+..+|+|++|+.+|+++|+ +.|+ .-+..++|+|.+|..+|+|++|+..+++|+++
T Consensus 346 ~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 346 TNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 3467778889999999999999999999999996 3444 04468999999999999999999999999864
Q ss_pred --CCCCh---HHHHHHHHHHHhCCChHHHHHHHHHhhc
Q 018381 317 --SPDWP---TAFYLQAAALFGLGMNNDAQETLKDGTN 349 (357)
Q Consensus 317 --~p~~~---~a~~~~g~~~~~lg~~~~A~~~~~~al~ 349 (357)
.|+++ +....++.++..+++|++|...|+++.+
T Consensus 426 ~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 426 THGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp HTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57765 4567899999999999999999998865
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.42 E-value=7.1e-07 Score=66.94 Aligned_cols=87 Identities=8% Similarity=0.050 Sum_probs=72.9
Q ss_pred hhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHH---HHHHHHHHHhhC-C-CChHHHHHHHHHHHhCCChHHHHH
Q 018381 268 FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQE---ALGDAMQAQVIS-P-DWPTAFYLQAAALFGLGMNNDAQE 342 (357)
Q Consensus 268 ~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~---A~~~~~~al~~~-p-~~~~a~~~~g~~~~~lg~~~~A~~ 342 (357)
...+...|.+.+..++. +..+-++.|.++.+..+..+ +|..++..+.-+ | ..-+.+|.+|..++++|+|++|+.
T Consensus 17 l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~ 95 (126)
T 1nzn_A 17 LLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 95 (126)
T ss_dssp HHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHH
Confidence 44566777777777776 88899999999999888776 888898888876 5 677889999999999999999999
Q ss_pred HHHHhhccccccc
Q 018381 343 TLKDGTNLEAKKH 355 (357)
Q Consensus 343 ~~~~al~l~p~~~ 355 (357)
+++..|+.+|+|.
T Consensus 96 ~~~~lL~~eP~n~ 108 (126)
T 1nzn_A 96 YVRGLLQTEPQNN 108 (126)
T ss_dssp HHHHHHHHCTTCH
T ss_pred HHHHHHHhCCCCH
Confidence 9999999999863
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.41 E-value=8.7e-07 Score=83.04 Aligned_cols=91 Identities=11% Similarity=0.057 Sum_probs=43.5
Q ss_pred HHHhhhHHhhcC---ChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhc----CChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 255 SKKRGDAAFRAK---DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS----DMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 255 ~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~----~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
....|..+...| ++++|+..|+++++..|. .+..++++|.+|... +++++|+..+++|. |+++.+++++
T Consensus 179 ~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~L 254 (452)
T 3e4b_A 179 YVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSL 254 (452)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHH
T ss_pred HHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHH
Confidence 334444444444 455555555555555444 444444555554433 44555555555544 4455555555
Q ss_pred HHH-H--HhCCChHHHHHHHHHhhc
Q 018381 328 AAA-L--FGLGMNNDAQETLKDGTN 349 (357)
Q Consensus 328 g~~-~--~~lg~~~~A~~~~~~al~ 349 (357)
|.+ + ...|++++|+..|+++++
T Consensus 255 g~~~~~~~~~~d~~~A~~~~~~Aa~ 279 (452)
T 3e4b_A 255 AQLLYDFPELGDVEQMMKYLDNGRA 279 (452)
T ss_dssp HHHHHHSGGGCCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 544 2 234445555555544443
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.39 E-value=6.1e-07 Score=69.84 Aligned_cols=81 Identities=12% Similarity=-0.037 Sum_probs=70.7
Q ss_pred HhHHHHHhhhHHhhcC---ChhHHHHHHHHHhccC-CCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHH
Q 018381 251 ETLNSKKRGDAAFRAK---DFPTAIECYTHFIDGG-TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 326 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 326 (357)
..+..++.|-.+.+.+ ++++++..+++.++.+ |.....++|++|.+++++|+|++|+..++++|+++|++.+|...
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 4456678888888877 7889999999999998 73278999999999999999999999999999999999999887
Q ss_pred HHHHH
Q 018381 327 QAAAL 331 (357)
Q Consensus 327 ~g~~~ 331 (357)
+-.+-
T Consensus 111 k~~ie 115 (152)
T 1pc2_A 111 ERLID 115 (152)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65554
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.34 E-value=3.5e-06 Score=79.59 Aligned_cols=96 Identities=14% Similarity=-0.045 Sum_probs=83.9
Q ss_pred HHhHHHHHhhhHHhh----cCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCCh
Q 018381 250 QETLNSKKRGDAAFR----AKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWP 321 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~ 321 (357)
..+......|..++. .+++++|+..|+++++. . ++.+++++|.+|.. .+++++|+..+++|++. +++
T Consensus 73 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 147 (490)
T 2xm6_A 73 GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--G-LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRD 147 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 456677788888888 89999999999999875 4 77889999999998 88999999999999775 689
Q ss_pred HHHHHHHHHHHh----CCChHHHHHHHHHhhcc
Q 018381 322 TAFYLQAAALFG----LGMNNDAQETLKDGTNL 350 (357)
Q Consensus 322 ~a~~~~g~~~~~----lg~~~~A~~~~~~al~l 350 (357)
.+++.+|.+|.. .+++++|++.|+++++.
T Consensus 148 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~ 180 (490)
T 2xm6_A 148 SGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ 180 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 999999999988 88999999999999876
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.32 E-value=1.9e-06 Score=66.73 Aligned_cols=78 Identities=14% Similarity=-0.006 Sum_probs=70.7
Q ss_pred CChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHh----CCChHHHH
Q 018381 266 KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG----LGMNNDAQ 341 (357)
Q Consensus 266 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----lg~~~~A~ 341 (357)
+|+++|+..|+++.+.... .+ . +|.+|...+.+++|+..+++|.+. +++.+++++|.+|.. .+++++|+
T Consensus 9 ~d~~~A~~~~~~aa~~g~~-~a--~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEM-FG--C--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCT-TH--H--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCH-hh--h--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 4789999999999998754 33 3 999999999999999999999987 899999999999999 89999999
Q ss_pred HHHHHhhcc
Q 018381 342 ETLKDGTNL 350 (357)
Q Consensus 342 ~~~~~al~l 350 (357)
..|++|.+.
T Consensus 82 ~~~~~Aa~~ 90 (138)
T 1klx_A 82 QYYSKACGL 90 (138)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 999999876
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.26 E-value=9.2e-06 Score=83.75 Aligned_cols=90 Identities=18% Similarity=0.191 Sum_probs=78.1
Q ss_pred hhhHHhhcCChhHHHHHHHHHhc----------------------cCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHh
Q 018381 258 RGDAAFRAKDFPTAIECYTHFID----------------------GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQV 315 (357)
Q Consensus 258 ~g~~~~~~~~~~~A~~~~~~ai~----------------------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 315 (357)
.|..+...|.|++|..+|+++-. ...+ ++.+|+++|.++...|++++|+..|.+|
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn-~p~vWsqLAKAql~~G~~kEAIdsYiKA-- 1131 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCN-EPAVWSQLAKAQLQKGMVKEAIDSYIKA-- 1131 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcC-CHHHHHHHHHHHHhCCCHHHHHHHHHhc--
Confidence 48888888888888888876531 1245 6779999999999999999999999887
Q ss_pred hCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 316 ISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 316 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
+++.+|++.|.++..+|+|++|++.|++|.+.+++
T Consensus 1132 ---dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 ---DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred ---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999999999988755
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.25 E-value=4.4e-06 Score=78.24 Aligned_cols=94 Identities=10% Similarity=-0.113 Sum_probs=59.9
Q ss_pred HHhHHHHHhhhH-H--hhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcC-----ChHHHHHHHHHHHhhCCCCh
Q 018381 250 QETLNSKKRGDA-A--FRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD-----MPQEALGDAMQAQVISPDWP 321 (357)
Q Consensus 250 ~~~~~~~~~g~~-~--~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-----~~~~A~~~~~~al~~~p~~~ 321 (357)
..+..+...|.. + ...+++++|+..|+++++. . ++.+++++|.+|. .| ++++|+.++++|. ++++
T Consensus 246 g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g-~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~ 318 (452)
T 3e4b_A 246 GYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--D-QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREV 318 (452)
T ss_dssp GSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCH
T ss_pred CCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCH
Confidence 344455555555 3 3566777777777776654 2 5666777777666 34 6777777777776 6777
Q ss_pred HHHHHHHHHHHh----CCChHHHHHHHHHhhcc
Q 018381 322 TAFYLQAAALFG----LGMNNDAQETLKDGTNL 350 (357)
Q Consensus 322 ~a~~~~g~~~~~----lg~~~~A~~~~~~al~l 350 (357)
.+++++|.+|.. ..++++|+..|+++.+.
T Consensus 319 ~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 319 AADYYLGQIYRRGYLGKVYPQKALDHLLTAARN 351 (452)
T ss_dssp HHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh
Confidence 777777766655 23677777777776654
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=98.16 E-value=4.6e-06 Score=76.65 Aligned_cols=92 Identities=12% Similarity=0.073 Sum_probs=55.3
Q ss_pred HHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q 018381 253 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALF 332 (357)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 332 (357)
..+...|..+.+.|+|++|++.|.++ . ++..|...+.++...|+|+.|...... |...|++ ...+...|.
T Consensus 149 ~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Ye 218 (449)
T 1b89_A 149 SNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELINYYQ 218 (449)
T ss_dssp TCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHHHHH
T ss_pred hhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHHHHH
Confidence 34445555555555555555555555 2 444555555555555555555443332 2233333 334567888
Q ss_pred hCCChHHHHHHHHHhhcccccc
Q 018381 333 GLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 333 ~lg~~~~A~~~~~~al~l~p~~ 354 (357)
..|++++|+..+++++.+++.+
T Consensus 219 k~G~~eEai~lLe~aL~le~ah 240 (449)
T 1b89_A 219 DRGYFEELITMLEAALGLERAH 240 (449)
T ss_dssp HTTCHHHHHHHHHHHTTSTTCC
T ss_pred HCCCHHHHHHHHHHHhCCcHHH
Confidence 9999999999999999998643
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.15 E-value=1.1e-05 Score=70.98 Aligned_cols=95 Identities=11% Similarity=-0.081 Sum_probs=49.9
Q ss_pred HhhhHHhhcCChhHHHHHHHHHhccCC--CCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC------ChHHHHHHH
Q 018381 257 KRGDAAFRAKDFPTAIECYTHFIDGGT--MVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD------WPTAFYLQA 328 (357)
Q Consensus 257 ~~g~~~~~~~~~~~A~~~~~~ai~~~p--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~------~~~a~~~~g 328 (357)
..|..+...|++++|+..+.++|..+| . +.+++...+.+++++|+++.|.+.+++..+.+|+ ..-.+..-|
T Consensus 105 ~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea 183 (310)
T 3mv2_B 105 LLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAES 183 (310)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHH
Confidence 445555555666666666666555554 4 5555555555566666666666666555555552 222222223
Q ss_pred HHHHhCC--ChHHHHHHHHHhhcccc
Q 018381 329 AALFGLG--MNNDAQETLKDGTNLEA 352 (357)
Q Consensus 329 ~~~~~lg--~~~~A~~~~~~al~l~p 352 (357)
.+....| ++++|...|+++.+..|
T Consensus 184 ~v~l~~g~~~~q~A~~~f~El~~~~p 209 (310)
T 3mv2_B 184 YIKFATNKETATSNFYYYEELSQTFP 209 (310)
T ss_dssp HHHHHHTCSTTTHHHHHHHHHHTTSC
T ss_pred HHHHHhCCccHHHHHHHHHHHHHhCC
Confidence 3344334 55555555555555444
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.13 E-value=3.7e-06 Score=77.66 Aligned_cols=99 Identities=8% Similarity=0.008 Sum_probs=80.3
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCCCch-----------------HHHhhHHHHHHhcCChHHHHHHHHHHHhh
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP-----------------TVFARRCLCYLLSDMPQEALGDAMQAQVI 316 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 316 (357)
...++|..+.+.|+|++|++.|.++++..|. .. .++.++|.+|...|++++|++.+.+++.+
T Consensus 6 ~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~ 84 (434)
T 4b4t_Q 6 SKLEEARRLVNEKQYNEAEQVYLSLLDKDSS-QSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEY 84 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSCCC-SSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-cchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4557788889999999999999999998876 33 25788999999999999999999999987
Q ss_pred CCCChHH------HHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 317 SPDWPTA------FYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 317 ~p~~~~a------~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
.+...++ +..+|.++...|++++|+..+++++...++
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~ 127 (434)
T 4b4t_Q 85 MMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKR 127 (434)
T ss_dssp HHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 7665543 345677777888888888888888876554
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.12 E-value=1.1e-05 Score=83.13 Aligned_cols=94 Identities=12% Similarity=0.026 Sum_probs=76.4
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC--------
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD-------- 319 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-------- 319 (357)
+......|.+.|..+.+.|++++|+..|.+| + ++..|.+.|.++.++|+|++|++++.+|++..++
T Consensus 1101 rvn~p~vWsqLAKAql~~G~~kEAIdsYiKA-----d-D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~La 1174 (1630)
T 1xi4_A 1101 RCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----D-DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELI 1174 (1630)
T ss_pred hcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHH
Confidence 4455678899999999999999999999886 5 8889999999999999999999999888866533
Q ss_pred -------------------ChHHHHHHHHHHHhCCChHHHHHHHHHh
Q 018381 320 -------------------WPTAFYLQAAALFGLGMNNDAQETLKDG 347 (357)
Q Consensus 320 -------------------~~~a~~~~g~~~~~lg~~~~A~~~~~~a 347 (357)
+...++..|..++..|+|++|+..|.+|
T Consensus 1175 faYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1175 FALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred HHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 2235566777777777777777777765
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.07 E-value=2.9e-05 Score=68.19 Aligned_cols=92 Identities=13% Similarity=0.017 Sum_probs=75.0
Q ss_pred hhhHHhhcC--ChhHHHHHHHHHhccCCC-CchHHHhhHHHHHHhcCChHHHHHHHHHHHhh----------CCCChHHH
Q 018381 258 RGDAAFRAK--DFPTAIECYTHFIDGGTM-VSPTVFARRCLCYLLSDMPQEALGDAMQAQVI----------SPDWPTAF 324 (357)
Q Consensus 258 ~g~~~~~~~--~~~~A~~~~~~ai~~~p~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----------~p~~~~a~ 324 (357)
.|...+..| ++++|...|+++.+..|+ .....++| +++.+|++++|.+.+++++++ +|+++.++
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~L 258 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFL 258 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHH
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHH
Confidence 343344444 999999999999887774 01334455 899999999999999988877 58999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 325 YLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 325 ~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.++..+...+|+ +|.+.++++.+++|++
T Consensus 259 aN~i~l~~~lgk--~a~~l~~qL~~~~P~h 286 (310)
T 3mv2_B 259 ANQITLALMQGL--DTEDLTNQLVKLDHEH 286 (310)
T ss_dssp HHHHHHHHHTTC--TTHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhCh--HHHHHHHHHHHhCCCC
Confidence 999999999998 8999999999999975
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.05 E-value=1.6e-05 Score=62.33 Aligned_cols=95 Identities=11% Similarity=-0.055 Sum_probs=76.2
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCC--------CchHHHhhHHHHHHhcCChHHHHHHHHHHHhhC---CC-
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM--------VSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS---PD- 319 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~--------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---p~- 319 (357)
...++++...++..|.|+.|+...+.++.+... ..+.+++.+|.+++..++|..|...|++||++. +.
T Consensus 20 ~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 20 HMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 345678888899999999999999998765432 112378999999999999999999999987543 11
Q ss_pred ---------------------ChHHHHHHHHHHHhCCChHHHHHHHHH
Q 018381 320 ---------------------WPTAFYLQAAALFGLGMNNDAQETLKD 346 (357)
Q Consensus 320 ---------------------~~~a~~~~g~~~~~lg~~~~A~~~~~~ 346 (357)
..+.-|.++.||..+|++++|+..++.
T Consensus 100 ~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 100 SKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 126789999999999999999999876
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.04 E-value=5.1e-07 Score=79.93 Aligned_cols=77 Identities=16% Similarity=0.117 Sum_probs=49.0
Q ss_pred ceeecCCCCCeeeCC--CCCeEEecCCcccccCCCCccccCCCC---CCcccccc-----CCC---------Cccccccc
Q 018381 43 ALYHDLNTYRILFDQ--DGNPRLSCFGLMKNSRDGKSYSTNLAF---TPPEYLRT-----GRV---------IPESVVYS 103 (357)
Q Consensus 43 iiH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~gt~~y---~aPE~~~~-----~~~---------~~~~Dv~s 103 (357)
++|+|++|.||+++. ++.+.|+||+.+..............+ ..|+.... +.. ....+.|+
T Consensus 193 ~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~ 272 (304)
T 3sg8_A 193 LIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWS 272 (304)
T ss_dssp EECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH
T ss_pred eEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHH
Confidence 799999999999997 456789999987654332111111111 22322111 111 11257899
Q ss_pred hHHHHHHHHhCCCCCC
Q 018381 104 FGTLLLDLLSGKHIPP 119 (357)
Q Consensus 104 lG~~l~el~~g~~~~~ 119 (357)
+|.++|.+.+|..++.
T Consensus 273 l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 273 FEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCHHHH
Confidence 9999999999986543
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.94 E-value=3.5e-05 Score=71.01 Aligned_cols=99 Identities=7% Similarity=-0.031 Sum_probs=83.6
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccC------CCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhh------CCCCh
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGG------TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI------SPDWP 321 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~ 321 (357)
.....|......|++++|+..|.+++... +. .+.++.++|.+|...|+|++|+..+.+++.. .+...
T Consensus 97 ~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~ 175 (434)
T 4b4t_Q 97 LKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFL-KHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLV 175 (434)
T ss_dssp HHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSS-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHH-HHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHH
Confidence 34445667778899999999999998632 23 4678999999999999999999999999865 45567
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 322 TAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 322 ~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
.++..+|.+|..+|+|++|...|++++.+.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 176 DVHLLESKVYHKLRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhc
Confidence 89999999999999999999999999987653
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.94 E-value=3e-05 Score=63.83 Aligned_cols=136 Identities=13% Similarity=0.035 Sum_probs=87.0
Q ss_pred chhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCccccCCC
Q 018381 5 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYC-SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 83 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~l-H~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~ 83 (357)
||.+.|. ..+.+|++.++|.++.|.+.+|.-+ +.+. -..+=+.|..|+|..+|.|.+.+ +.+ ......
T Consensus 34 SL~eIL~-~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~s--------~~~~~~ 102 (229)
T 2yle_A 34 SLEEILR-LYNQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AAD--------DAGEPP 102 (229)
T ss_dssp EHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHH-HcCCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-ccc--------cccccC
Confidence 6888883 4688999999999999999998776 2222 11233456888999999887663 211 112235
Q ss_pred CCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhccC--
Q 018381 84 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY-- 161 (357)
Q Consensus 84 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~-- 161 (357)
+.+||... ...+.+.=|||||+++|.-+-=..|.. -+...++.+..||..|...
T Consensus 103 ~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~-----------------------eE~eLS~~LE~LL~~Mt~~~~ 158 (229)
T 2yle_A 103 PVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN-----------------------EERELSPPLEQLIDHMANTVE 158 (229)
T ss_dssp ----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT-----------------------EEECCCHHHHHHHHHHTTCCC
T ss_pred CCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc-----------------------cchhhCHHHHHHHHHHHhccc
Confidence 66888774 344567789999999998875443311 1223456788888888755
Q ss_pred -----------------------CCCCCCCHHHHHHH
Q 018381 162 -----------------------EPRERPNAKSLVAS 175 (357)
Q Consensus 162 -----------------------~p~~Rps~~~v~~~ 175 (357)
.+..|+++++|++.
T Consensus 159 d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~ 195 (229)
T 2yle_A 159 ADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKL 195 (229)
T ss_dssp --------------------CCSCCCCCCSHHHHHHH
T ss_pred ccccccccccccccccccccccccccCcCCHHHHHHH
Confidence 23567788887765
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.86 E-value=5e-05 Score=57.05 Aligned_cols=58 Identities=5% Similarity=-0.187 Sum_probs=27.1
Q ss_pred HHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 270 TAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 270 ~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
+++..+...++.+|...-..++.+|..++++|+|++|+..++..+++.|++.+|.-.+
T Consensus 61 ~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 61 LGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred HHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 4444444444444431334444445555555555555555555555555444444333
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.78 E-value=2.4e-05 Score=70.07 Aligned_cols=77 Identities=14% Similarity=0.102 Sum_probs=64.3
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
..+..+...|..++..|++++|+..+++|+.++| +..+|..+|.++...|++++|++.+++|+.++|.....++..+
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~--s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~~~~ 351 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM--SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIEN 351 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHHHhC
Confidence 3444555566677778999999999999999996 5778899999999999999999999999999998875444333
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00021 Score=54.41 Aligned_cols=69 Identities=9% Similarity=-0.040 Sum_probs=42.4
Q ss_pred chHHHhhHHHHHHhcCCh---HHHHHHHHHHHhhCC-CChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 286 SPTVFARRCLCYLLSDMP---QEALGDAMQAQVISP-DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 286 ~~~~~~~~a~~~~~~~~~---~~A~~~~~~al~~~p-~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
....-++.|.++.+..+. .++|..++..+.-.| +.-+.+|.+|..++++|+|++|+++.+..|+.+|+|
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n 110 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNN 110 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCC
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCc
Confidence 555666666666655543 356666666666555 344566666666666666666666666666666655
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=4.4e-05 Score=70.72 Aligned_cols=77 Identities=10% Similarity=0.043 Sum_probs=64.2
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhc-----cCCC--CchHHHhhHHHHHHhcCChHHHHHHHHHHHhh---
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFID-----GGTM--VSPTVFARRCLCYLLSDMPQEALGDAMQAQVI--- 316 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~-----~~p~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--- 316 (357)
..+..+..+.+.|..+..+|+|++|+.+|+++++ +.|+ .-+..++|+|.+|..+|+|++|+..+++|+++
T Consensus 335 ~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 335 SNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 3567778888999999999999999999999996 3333 04568999999999999999999999999864
Q ss_pred --CCCChHH
Q 018381 317 --SPDWPTA 323 (357)
Q Consensus 317 --~p~~~~a 323 (357)
.|+++..
T Consensus 415 ~lG~~Hp~~ 423 (433)
T 3qww_A 415 AHGKDHPYI 423 (433)
T ss_dssp HTCTTCHHH
T ss_pred HcCCCChHH
Confidence 4777653
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.67 E-value=2.5e-05 Score=71.81 Aligned_cols=51 Identities=16% Similarity=-0.020 Sum_probs=18.7
Q ss_pred HHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHh
Q 018381 289 VFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDG 347 (357)
Q Consensus 289 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~a 347 (357)
+|.++|.+++..|+|++|+..|.++ ..|.++|.++.++|+|++|+++|++|
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA 174 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA 174 (449)
T ss_dssp -------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc
Confidence 4455555555555555555555444 23444555555555555555555544
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=1.9e-05 Score=67.97 Aligned_cols=27 Identities=15% Similarity=0.066 Sum_probs=23.4
Q ss_pred ceeecCCCCCeeeCCCCCeEEecCCcc
Q 018381 43 ALYHDLNTYRILFDQDGNPRLSCFGLM 69 (357)
Q Consensus 43 iiH~dlkp~Nill~~~~~~kl~Dfg~~ 69 (357)
++|+|++|.||++++++.+.|+||+.+
T Consensus 185 l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 185 FSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp EECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred EECCCCCcCcEEEECCcEEEEEEchhc
Confidence 899999999999987655679999864
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00025 Score=53.04 Aligned_cols=80 Identities=10% Similarity=-0.090 Sum_probs=66.1
Q ss_pred hHHHHHhhhHHhhcCChhH---HHHHHHHHhccC-CCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPT---AIECYTHFIDGG-TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~---A~~~~~~ai~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
....++.|-.+.+..+... ++.++...++.+ |...-.+.+.+|..++++|+|++|+..++..|+++|++.+|.-.+
T Consensus 35 ~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk 114 (126)
T 1nzn_A 35 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 114 (126)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3455666777777666655 999999999887 632678999999999999999999999999999999999998776
Q ss_pred HHHH
Q 018381 328 AAAL 331 (357)
Q Consensus 328 g~~~ 331 (357)
..+-
T Consensus 115 ~~i~ 118 (126)
T 1nzn_A 115 RLID 118 (126)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=4.2e-05 Score=70.89 Aligned_cols=87 Identities=14% Similarity=-0.067 Sum_probs=68.6
Q ss_pred HHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhc-----cCCC--CchHHHhhHHHHHHhcCChHHHHHHHHHHHhh---
Q 018381 247 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFID-----GGTM--VSPTVFARRCLCYLLSDMPQEALGDAMQAQVI--- 316 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~-----~~p~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--- 316 (357)
..+..+..+.+.|..+...|+|++|+.+|.++++ +.|+ .-+..++|+|.+|..+|++++|+..+++|+++
T Consensus 324 ~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 324 INIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 3566777888899999999999999999999995 2333 04457999999999999999999999999864
Q ss_pred --CCCChH---HHHHHHHHHHh
Q 018381 317 --SPDWPT---AFYLQAAALFG 333 (357)
Q Consensus 317 --~p~~~~---a~~~~g~~~~~ 333 (357)
.|+++. ++.+++.+...
T Consensus 404 ~lG~~Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 404 THGREHSLIEDLILLLEECDAN 425 (429)
T ss_dssp HTCTTSHHHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHH
Confidence 577764 44555555543
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00013 Score=62.83 Aligned_cols=79 Identities=9% Similarity=-0.050 Sum_probs=63.7
Q ss_pred HHHHh-ccCCCCchHHHhhHHHHHHh---c--CC------hHHHHHHHHHHHhhCCC--ChHHHHHHHHHHHhC-----C
Q 018381 275 YTHFI-DGGTMVSPTVFARRCLCYLL---S--DM------PQEALGDAMQAQVISPD--WPTAFYLQAAALFGL-----G 335 (357)
Q Consensus 275 ~~~ai-~~~p~~~~~~~~~~a~~~~~---~--~~------~~~A~~~~~~al~~~p~--~~~a~~~~g~~~~~l-----g 335 (357)
+.+++ +.+|+ +..+++-.|.+... . |. ...|...+++|+++||+ +..+|..+|..|..+ |
T Consensus 140 ~~~~l~~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gG 218 (301)
T 3u64_A 140 LHKVLSRCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGG 218 (301)
T ss_dssp HHHHHTTCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTC
T ss_pred HHHHHHHcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCC
Confidence 34444 45676 88877777776532 2 33 46888999999999999 566999999999996 9
Q ss_pred ChHHHHHHHHHhhcccccc
Q 018381 336 MNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 336 ~~~~A~~~~~~al~l~p~~ 354 (357)
+.++|.++|++||+++|+.
T Consensus 219 d~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 219 GMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp CHHHHHHHHHHHHHHCCTT
T ss_pred CHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999964
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=97.62 E-value=5.9e-05 Score=68.17 Aligned_cols=54 Identities=11% Similarity=0.049 Sum_probs=46.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhc---------------------------------------------------------
Q 018381 17 PMKWAMRVRVALYLAQALDYCSS--------------------------------------------------------- 39 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~--------------------------------------------------------- 39 (357)
.++..+...++.++++.|..||+
T Consensus 135 ~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 214 (359)
T 3dxp_A 135 GMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDAD 214 (359)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCC
Confidence 36788889999999999999997
Q ss_pred -CCCceeecCCCCCeeeCCCCC--eEEecCCcccc
Q 018381 40 -KGRALYHDLNTYRILFDQDGN--PRLSCFGLMKN 71 (357)
Q Consensus 40 -~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~~~~ 71 (357)
.. ++|+|++|.|||++.++. +.|+||+.+..
T Consensus 215 ~~~-lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 215 LTS-IVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCE-EECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred Cce-EEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 23 899999999999997753 68999998653
|
| >2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0024 Score=58.24 Aligned_cols=99 Identities=10% Similarity=0.009 Sum_probs=80.2
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCC-------ch--------------HHHhhHHHHHHhcCChHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-------SP--------------TVFARRCLCYLLSDMPQEALGD 309 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-------~~--------------~~~~~~a~~~~~~~~~~~A~~~ 309 (357)
....+...|......|+.++|...+.+|+.+.... .. .+...++.++...|++++|+..
T Consensus 114 ~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~ 193 (388)
T 2ff4_A 114 RFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAE 193 (388)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 33455566677777889999999999998764220 00 1344567788899999999999
Q ss_pred HHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhc
Q 018381 310 AMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTN 349 (357)
Q Consensus 310 ~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 349 (357)
+.+++..+|-+-.+|..+-.+|+..|+..+|++.|+++-+
T Consensus 194 l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 194 LEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988743
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00038 Score=52.25 Aligned_cols=83 Identities=8% Similarity=-0.062 Sum_probs=68.9
Q ss_pred HHHHHHHHhccCCCCchHHHhhHHHHHHhcCCh---HHHHHHHHHHHhhCC-CChHHHHHHHHHHHhCCChHHHHHHHHH
Q 018381 271 AIECYTHFIDGGTMVSPTVFARRCLCYLLSDMP---QEALGDAMQAQVISP-DWPTAFYLQAAALFGLGMNNDAQETLKD 346 (357)
Q Consensus 271 A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~---~~A~~~~~~al~~~p-~~~~a~~~~g~~~~~lg~~~~A~~~~~~ 346 (357)
..+.|.+-+ .+.+....-++.|.++.+..+. ..+|..++..++.+| ..-+.+|.+|..++++|+|++|+++.+.
T Consensus 26 l~~qy~~E~--~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~ 103 (134)
T 3o48_A 26 LRQQVVSEG--GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDT 103 (134)
T ss_dssp HHHHHHHTT--GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHh--CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 344454433 3444788899999999988765 479999999999988 4578999999999999999999999999
Q ss_pred hhccccccc
Q 018381 347 GTNLEAKKH 355 (357)
Q Consensus 347 al~l~p~~~ 355 (357)
+|+++|+|.
T Consensus 104 lL~~eP~N~ 112 (134)
T 3o48_A 104 LFEHERNNK 112 (134)
T ss_dssp HHTTCTTCH
T ss_pred HHhhCCCCH
Confidence 999999874
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0017 Score=49.40 Aligned_cols=76 Identities=5% Similarity=-0.174 Sum_probs=61.9
Q ss_pred HHhhhHHhhcC---ChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 256 KKRGDAAFRAK---DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 256 ~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
++.|-.+.+.. +..+++.+++..++..|...-...+.+|..++++|+|++|..+++..|+++|+|.+|.-.+..+-
T Consensus 43 F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie 121 (144)
T 1y8m_A 43 FNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVE 121 (144)
T ss_dssp HHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 34444444433 44679999999999888647789999999999999999999999999999999999887765554
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00015 Score=61.92 Aligned_cols=28 Identities=11% Similarity=0.012 Sum_probs=24.5
Q ss_pred ceeecCCCCCeeeCCCCCeEEecCCccc
Q 018381 43 ALYHDLNTYRILFDQDGNPRLSCFGLMK 70 (357)
Q Consensus 43 iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 70 (357)
++|+|++|.||++++++.+.|+|||.+.
T Consensus 186 l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 186 VTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred EECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 9999999999999877667799999754
|
| >4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0035 Score=61.39 Aligned_cols=99 Identities=4% Similarity=-0.089 Sum_probs=76.9
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhcc-CCCCchHHHhhHHHHHHhcC-ChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDG-GTMVSPTVFARRCLCYLLSD-MPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~-~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
.+...+....+.|+.+.|...|.+|++. .+. ...+|...|..-...+ +++.|...|+++++..|+.+..|...+..+
T Consensus 436 vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~-~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe 514 (679)
T 4e6h_A 436 VYCVYMNTMKRIQGLAASRKIFGKCRRLKKLV-TPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFL 514 (679)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGS-CTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC-ChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHH
Confidence 4555566666778888888888888887 434 5667777776666654 488888888888888888888887888878
Q ss_pred HhCCChHHHHHHHHHhhccccc
Q 018381 332 FGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al~l~p~ 353 (357)
...|+.+.|...|++|+...|+
T Consensus 515 ~~~~~~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 515 IYVNEESQVKSLFESSIDKISD 536 (679)
T ss_dssp HHHTCHHHHHHHHHHHTTTSSS
T ss_pred HhCCCHHHHHHHHHHHHHhcCC
Confidence 8888888999999988887763
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0042 Score=48.62 Aligned_cols=80 Identities=18% Similarity=0.146 Sum_probs=60.9
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhcc------CC-------------------CCchHHHhhHHHHHHhcCChH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDG------GT-------------------MVSPTVFARRCLCYLLSDMPQ 304 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p-------------------~~~~~~~~~~a~~~~~~~~~~ 304 (357)
..++.+...|+.+|..|+|.+|+..|++||.. .+ . +.++.+..|.||.++++++
T Consensus 61 ~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~-e~Elkykia~C~~~l~~~~ 139 (167)
T 3ffl_A 61 QKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPS-EIEVKYKLAECYTVLKQDK 139 (167)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCC-HHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccc-hHHHHHHHHHHHHHHCCHH
Confidence 44667888999999999999999999999741 11 1 2368899999999999999
Q ss_pred HHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 305 EALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 305 ~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
+||..++. |-..-..++....+|..|
T Consensus 140 ~Ai~~Le~-Ip~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 140 DAIAILDG-IPSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHHT-SCGGGCCHHHHHHHHHHC
T ss_pred HHHHHHhc-CCchhcCHHHHHHHHHHh
Confidence 99998754 333345666666666543
|
| >4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.003 Score=61.83 Aligned_cols=81 Identities=6% Similarity=-0.056 Sum_probs=76.2
Q ss_pred hHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHH-HHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHh
Q 018381 269 PTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEAL-GDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDG 347 (357)
Q Consensus 269 ~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~-~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~a 347 (357)
......|+++|...|. .+.+|+..|..+...|+.++|+ ..+++|+...|.....|+..+......|++++|.+.|+++
T Consensus 326 ~Rv~~~Ye~aL~~~p~-~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~ 404 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCF-APEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSC 404 (679)
T ss_dssp HHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4567889999999999 9999999999999999999997 9999999999999999999999999999999999999999
Q ss_pred hcc
Q 018381 348 TNL 350 (357)
Q Consensus 348 l~l 350 (357)
++.
T Consensus 405 l~~ 407 (679)
T 4e6h_A 405 IDR 407 (679)
T ss_dssp HHH
T ss_pred HHH
Confidence 975
|
| >4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.002 Score=63.34 Aligned_cols=60 Identities=13% Similarity=0.006 Sum_probs=54.2
Q ss_pred HHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHh
Q 018381 288 TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDG 347 (357)
Q Consensus 288 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~a 347 (357)
.++.-.+..+...|+|+-|++.+++|+.+.|+....|+.++.+|..+|+|+.|+-.+.-+
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 355556777788999999999999999999999999999999999999999999988876
|
| >4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0063 Score=46.66 Aligned_cols=100 Identities=11% Similarity=-0.048 Sum_probs=77.9
Q ss_pred hHHHHHhhhHHhhcCCh------hHHHHHHHHHhccCCCCch--------HHHhhHHHHHHhcCChHHHHHHHHHHHhhC
Q 018381 252 TLNSKKRGDAAFRAKDF------PTAIECYTHFIDGGTMVSP--------TVFARRCLCYLLSDMPQEALGDAMQAQVIS 317 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~------~~A~~~~~~ai~~~p~~~~--------~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 317 (357)
.+.+.......-+.|+. ++-++.|++|+..-|. .. -+|.+.|.- ...++.++|...|+.++.+-
T Consensus 13 yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp-~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~h 90 (161)
T 4h7y_A 13 PEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPP-DKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANC 90 (161)
T ss_dssp HHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCG-GGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCc-cccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHh
Confidence 34444444555555777 7888999999976664 22 134444433 56699999999999999999
Q ss_pred CCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 318 PDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 318 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
..+++.|...|..-.+.|+.+.|.+.+.+|+.+.|.
T Consensus 91 KkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k 126 (161)
T 4h7y_A 91 KKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAV 126 (161)
T ss_dssp TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCC
Confidence 999999999999999999999999999999998885
|
| >1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.026 Score=47.84 Aligned_cols=94 Identities=11% Similarity=0.006 Sum_probs=77.9
Q ss_pred hhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHH--HHH---------
Q 018381 259 GDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAF--YLQ--------- 327 (357)
Q Consensus 259 g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~--~~~--------- 327 (357)
....++.|+.++|++.....|+.+|. |+.....+...++-.|+++.|++.++-+.+++|+....- |+.
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~-da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~~R~ 82 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARK 82 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999 999999999999999999999999999999999877542 211
Q ss_pred ------------------------HHHHHhCCChHHHHHHHHHhhccccc
Q 018381 328 ------------------------AAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 328 ------------------------g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
+......|+.++|...-.+|++.-|.
T Consensus 83 ~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~ 132 (273)
T 1zbp_A 83 DFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQE 132 (273)
T ss_dssp HHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCcc
Confidence 34444567888888888888776654
|
| >4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0091 Score=58.71 Aligned_cols=61 Identities=10% Similarity=-0.021 Sum_probs=55.4
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQA 313 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 313 (357)
..-+..++.-+..+|+|+.|+.+-.+|+...|. +...|+.++.||..+|+|+.|+-.++-.
T Consensus 337 ~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPs-eF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 337 SDLLNIQTNFLLNRGDYELALGVSNTSTELALD-SFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred hHHHHHHHHHHhccCcHHHHHHHHHHHHhcCch-hhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 446777889999999999999999999999999 9999999999999999999999776554
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0057 Score=54.32 Aligned_cols=30 Identities=10% Similarity=0.051 Sum_probs=26.4
Q ss_pred CCCceeecCCCCCeeeCCCCCeEEecCCccc
Q 018381 40 KGRALYHDLNTYRILFDQDGNPRLSCFGLMK 70 (357)
Q Consensus 40 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 70 (357)
.. ++|+|+++.|||++.++.+.|+||+.+.
T Consensus 222 ~~-l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PN-LCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CC-EECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred Cc-eecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 45 9999999999999878889999999653
|
| >1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1 | Back alignment and structure |
|---|
Probab=95.59 E-value=0.027 Score=47.72 Aligned_cols=60 Identities=22% Similarity=0.003 Sum_probs=56.7
Q ss_pred HHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 295 LCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 295 ~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
..+++.|+.++|++.+...|+-+|.+++.-..+-..|+-.|+++.|.+.++.+.+++|+.
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~ 64 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEY 64 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGG
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchh
Confidence 346788999999999999999999999999999999999999999999999999999985
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=95.58 E-value=0.013 Score=51.37 Aligned_cols=28 Identities=18% Similarity=0.159 Sum_probs=23.7
Q ss_pred ceeecCCCCCeeeCC---CCC-eEEecCCccc
Q 018381 43 ALYHDLNTYRILFDQ---DGN-PRLSCFGLMK 70 (357)
Q Consensus 43 iiH~dlkp~Nill~~---~~~-~kl~Dfg~~~ 70 (357)
++|+|++|.||+++. ++. +.|+||+.+.
T Consensus 192 ~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 192 LIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp EECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred eEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 799999999999997 455 4899999754
|
| >4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A | Back alignment and structure |
|---|
Probab=95.37 E-value=0.17 Score=47.52 Aligned_cols=94 Identities=9% Similarity=-0.003 Sum_probs=76.9
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhh--CCCChHHHHHHHHHH
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI--SPDWPTAFYLQAAAL 331 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--~p~~~~a~~~~g~~~ 331 (357)
.+...-..+.+.|++++|...|++..+..-..+...|+.+=.+|.+.|++++|.+.+++..+. .|+ ...|..+-.+|
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd-~~ty~~Li~~~ 185 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPE-EPELAALLKVS 185 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHH
Confidence 344455677889999999999999887543336778888888999999999999999998764 444 45688888999
Q ss_pred HhCCChHHHHHHHHHhh
Q 018381 332 FGLGMNNDAQETLKDGT 348 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al 348 (357)
.+.|+.++|.+.|++.-
T Consensus 186 ~~~g~~d~A~~ll~~Mr 202 (501)
T 4g26_A 186 MDTKNADKVYKTLQRLR 202 (501)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred hhCCCHHHHHHHHHHHH
Confidence 99999999999998754
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=95.33 E-value=0.014 Score=53.79 Aligned_cols=31 Identities=16% Similarity=0.152 Sum_probs=26.7
Q ss_pred hcCCCceeecCCCCCeeeCCCCCeEEecCCccc
Q 018381 38 SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 70 (357)
Q Consensus 38 H~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 70 (357)
+... ++|+|++|.|||++.++ ++|+||+.+.
T Consensus 230 ~~~~-liHGDl~~~Nil~~~~~-~~lID~e~a~ 260 (420)
T 2pyw_A 230 RAQA-LIHGDLHTGSVMVTQDS-TQVIDPEFSF 260 (420)
T ss_dssp BCCE-EECSCCSGGGEEECSSC-EEECCCTTCE
T ss_pred CCCe-EEecCCCCCcEEEeCCC-CEEEeCcccc
Confidence 4556 99999999999999776 9999998764
|
| >1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=95.09 E-value=0.088 Score=49.29 Aligned_cols=79 Identities=13% Similarity=-0.032 Sum_probs=72.2
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 333 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 333 (357)
.+...|+.+.-...+..|..+|.+|+.+.|. +...|+.+|.+....|+.-+|+-+|-+++....-++.|.-++...+..
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~-~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCC-CCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 4567788888888899999999999999999 999999999999999999999999999999888899999999887764
|
| >3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=94.89 E-value=0.24 Score=38.78 Aligned_cols=121 Identities=11% Similarity=-0.015 Sum_probs=82.6
Q ss_pred HHHHHhhcCCCchhhHhHhhhhhhhHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcC
Q 018381 222 HEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD 301 (357)
Q Consensus 222 ~~il~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~ 301 (357)
..+.....+++-+.......+- . +...+--.-.+..++-.|+|..|+-.+.+ -+ ..+..+..+.||.+++
T Consensus 7 ~kI~Ks~kY~dYdt~~fLsa~L-~---~~~~eY~lL~~I~LyyngEY~R~Lf~L~~-----lN-T~Ts~YYk~LCy~klK 76 (242)
T 3kae_A 7 GKICKSIRYRDYETAIFLAACL-L---PCKPEYRMLMSIVLYLNGEYTRALFHLHK-----LN-TCTSKYYESLCYKKKK 76 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHH-C-------CTHHHHHHHHHHTTCHHHHHHHHHT-----CC-BHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhcccccHHHHHHHHH-c---cCChHHHhhhhhhhhhcchHhHHHHHHHh-----cc-hHHHHHHHHHHHHHHH
Confidence 4556666666666442221111 1 11112233457778889999998876543 23 5566777899999999
Q ss_pred ChHHHHHHHHHHH--hhC---------------CCChHH-HHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 018381 302 MPQEALGDAMQAQ--VIS---------------PDWPTA-FYLQAAALFGLGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 302 ~~~~A~~~~~~al--~~~---------------p~~~~a-~~~~g~~~~~lg~~~~A~~~~~~al~l~p 352 (357)
+|..|+..+++.| +++ |.+-+. +..+|..+.++|+-+||+.+|......+|
T Consensus 77 dYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~ 145 (242)
T 3kae_A 77 DYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSF 145 (242)
T ss_dssp CHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCcc
Confidence 9999999999998 232 444444 45579999999999999999999887765
|
| >2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B | Back alignment and structure |
|---|
Probab=94.78 E-value=0.13 Score=48.37 Aligned_cols=94 Identities=11% Similarity=0.057 Sum_probs=71.0
Q ss_pred HHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcC-ChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 253 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD-MPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
..+...+....+.++.+.|...|.+| +..+. ....|...|..-+..+ +++.|...++++++..|+.+..+...+...
T Consensus 287 ~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~-~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e 364 (493)
T 2uy1_A 287 LLRINHLNYVLKKRGLELFRKLFIEL-GNEGV-GPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFL 364 (493)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCC-CHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCC-ChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 34555566666677889999999999 43333 5667766676665555 699999999999998898888777777777
Q ss_pred HhCCChHHHHHHHHHhh
Q 018381 332 FGLGMNNDAQETLKDGT 348 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al 348 (357)
..+|+.+.|...|+++.
T Consensus 365 ~~~~~~~~aR~l~er~~ 381 (493)
T 2uy1_A 365 LRIGDEENARALFKRLE 381 (493)
T ss_dssp HHHTCHHHHHHHHHHSC
T ss_pred HHcCCHHHHHHHHHHHH
Confidence 88889998888888863
|
| >2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B | Back alignment and structure |
|---|
Probab=94.68 E-value=0.13 Score=48.25 Aligned_cols=102 Identities=8% Similarity=-0.176 Sum_probs=73.4
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHH--------------------------------
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLC-------------------------------- 296 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~-------------------------------- 296 (357)
+.....|...+.-....|+.++|...|.+|+.. |. +..+|...+..
T Consensus 210 p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~-~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 287 (493)
T 2uy1_A 210 YYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SD-GMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDL 287 (493)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CC-SSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CC-cHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHH
Confidence 444667888888888899999999999999999 88 76555433322
Q ss_pred --------HHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCC-ChHHHHHHHHHhhccccc
Q 018381 297 --------YLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLG-MNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 297 --------~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg-~~~~A~~~~~~al~l~p~ 353 (357)
....++.+.|...+++| ...+.....|...|..-+..+ +.+.|...|+.+++..|+
T Consensus 288 lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~ 352 (493)
T 2uy1_A 288 LRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPD 352 (493)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCC
Confidence 12356678888888888 433334556666666666566 699999999999887665
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 357 | ||||
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 4e-27 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-26 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 5e-25 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-24 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-24 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 5e-24 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 3e-23 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 5e-23 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 7e-23 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-22 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 5e-22 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 5e-22 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 9e-22 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-21 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 2e-21 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-21 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 3e-21 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 3e-21 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 5e-21 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 7e-21 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 1e-20 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-20 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-20 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 3e-20 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 5e-20 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 7e-19 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-18 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 5e-18 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 5e-18 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-17 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-17 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-17 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-17 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 5e-17 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 7e-17 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 3e-16 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 4e-16 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 7e-16 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 8e-16 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-15 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 3e-15 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 4e-15 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-14 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 3e-14 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 4e-14 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 6e-14 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 3e-13 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-12 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 4e-12 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-12 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 5e-12 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 7e-12 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 1e-11 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 1e-11 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-11 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 7e-11 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 7e-10 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 9e-10 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-09 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 6e-08 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 1e-07 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 2e-06 | |
| d1elra_ | 128 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 3e-04 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-04 | |
| d1kt1a1 | 168 | a.118.8.1 (A:254-421) FKBP51, C-terminal domain {M | 0.002 | |
| d1p5qa1 | 170 | a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal d | 0.002 | |
| d1a17a_ | 159 | a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo | 0.003 | |
| d2fbna1 | 153 | a.118.8.1 (A:22-174) Putative 70 kda peptidylproly | 0.004 |
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 106 bits (265), Expect = 4e-27
Identities = 35/191 (18%), Positives = 76/191 (39%), Gaps = 10/191 (5%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
M L +L Q + + + +A ++ A++Y K ++ DL L ++
Sbjct: 95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHL 153
Query: 61 PRLSCFGLMKNSRDGKSYST-----NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 115
+++ FGL + + + +T PE L + +S V++FG LL ++ +
Sbjct: 154 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 213
Query: 116 HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175
P +DL L++ ++ L C Q+ P +RP+ + +
Sbjct: 214 M-SPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 269
Query: 176 LTPLQKEAEVP 186
+ +E+ +
Sbjct: 270 FETMFQESSIS 280
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (261), Expect = 1e-26
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 19/195 (9%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
+L HL H + + +A AQ +DY +K ++ DL + I +D
Sbjct: 85 CEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSI-IHRDLKSNNIFLHEDLT 142
Query: 61 PRLSCFGL--MKNSRDGKSYSTNLAFTP----PEYLRT---GRVIPESVVYSFGTLLLDL 111
++ FGL +K+ G L+ + PE +R +S VY+FG +L +L
Sbjct: 143 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
Query: 112 LSGK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 167
++G+ +I + + G+ +L S + + + RL + CL+ + ERP
Sbjct: 203 MTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRDERP 258
Query: 168 NAKSLVASLTPLQKE 182
++AS+ L +
Sbjct: 259 LFPQILASIELLARS 273
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (250), Expect = 5e-25
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 11/193 (5%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
M +L L + ++ V +A +A + Y ++ DL IL ++
Sbjct: 93 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGENLV 151
Query: 61 PRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 115
+++ FGL + D + + + +T PE GR +S V+SFG LL +L +
Sbjct: 152 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 211
Query: 116 HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175
+P ++ + L ++ + L L +C + EP ERP + L A
Sbjct: 212 RVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 267
Query: 176 LTPLQKEAEVPSY 188
L E P Y
Sbjct: 268 LEDYFTSTE-PQY 279
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 99.3 bits (247), Expect = 1e-24
Identities = 37/187 (19%), Positives = 71/187 (37%), Gaps = 16/187 (8%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
M +L +L + ++ +L + +A++Y ++ DL +L +D
Sbjct: 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVSEDNV 141
Query: 61 PRLSCFGLMKN-SRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP- 118
++S FGL K S + + +T PE LR + +S V+SFG LL ++ S +P
Sbjct: 142 AKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 201
Query: 119 ----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVA 174
+ + + D C + + C + RP+ L
Sbjct: 202 PRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMRPSFLQLRE 252
Query: 175 SLTPLQK 181
L ++
Sbjct: 253 QLEHIKT 259
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.2 bits (244), Expect = 2e-24
Identities = 36/181 (19%), Positives = 74/181 (40%), Gaps = 11/181 (6%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
M N L +L + + + + +A++Y SK L+ DL L + G
Sbjct: 81 MANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQF-LHRDLAARNCLVNDQGV 138
Query: 61 PRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 115
++S FGL + D + S+ + ++PPE L + +S +++FG L+ ++ S
Sbjct: 139 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 198
Query: 116 HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175
+P + L + + ++ + C + ERP K L+++
Sbjct: 199 KMPYER----FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 254
Query: 176 L 176
+
Sbjct: 255 I 255
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.4 bits (242), Expect = 5e-24
Identities = 32/186 (17%), Positives = 72/186 (38%), Gaps = 11/186 (5%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
M + LS + + + + L + + + Y ++ DL L ++
Sbjct: 82 MEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQV 139
Query: 61 PRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 115
++S FG+ + D + S+ + + PE R +S V+SFG L+ ++ S
Sbjct: 140 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 199
Query: 116 HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175
IP + + + + + + T + ++ + C + P +RP L+
Sbjct: 200 KIPYENRSN----SEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255
Query: 176 LTPLQK 181
L + +
Sbjct: 256 LAEIAE 261
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.4 bits (237), Expect = 3e-23
Identities = 40/186 (21%), Positives = 65/186 (34%), Gaps = 21/186 (11%)
Query: 1 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYH----DLNTYRIL 54
L+ + E Q + +RV L AL C + + DL +
Sbjct: 87 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 146
Query: 55 FDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLD 110
D N +L FGL + S++ TP PE + +S ++S G LL +
Sbjct: 147 LDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 206
Query: 111 LLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT---ELVRLASRCLQYEPRERP 167
L + PP + L EG F EL + +R L + RP
Sbjct: 207 LCALM--PPFT------AFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRP 258
Query: 168 NAKSLV 173
+ + ++
Sbjct: 259 SVEEIL 264
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.7 bits (235), Expect = 5e-23
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 20/186 (10%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
M N +L L + + +A +A+ + + + ++ DL IL +
Sbjct: 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSDTLS 147
Query: 61 PRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 115
+++ FGL + D + + + +T PE + G +S V+SFG LL ++++
Sbjct: 148 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 116 HIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAK 170
IP + + ++ D+C E EL +L C + P +RP
Sbjct: 208 RIPYPGMTNPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFD 258
Query: 171 SLVASL 176
L + L
Sbjct: 259 YLRSVL 264
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 94.8 bits (235), Expect = 7e-23
Identities = 35/190 (18%), Positives = 73/190 (38%), Gaps = 15/190 (7%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
M N +L + V + +A + Y + ++ DL IL + +
Sbjct: 109 MENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY-VHRDLAARNILVNSNLV 166
Query: 61 PRLSCFGLMKNSRDGKSYSTN---------LAFTPPEYLRTGRVIPESVVYSFGTLLLDL 111
++S FGL + D S T + +T PE ++ + S V+S+G ++ ++
Sbjct: 167 CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV 226
Query: 112 LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKS 171
+S P + ++ + ++ D + L +L C Q + RP
Sbjct: 227 MSYGERPYWD----MTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQ 282
Query: 172 LVASLTPLQK 181
+V +L + +
Sbjct: 283 IVNTLDKMIR 292
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.7 bits (230), Expect = 2e-22
Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 15/177 (8%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
P T+ + L LA AL YC SK ++ D+ +L G
Sbjct: 88 APLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGE 144
Query: 61 PRLSCFGLMKNSRDGKSYSTN--LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP 118
+++ FG ++ + + L + PPE + + ++S G L + L GK P
Sbjct: 145 LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK--P 202
Query: 119 PSHALDLIRGKNFLMLMDSCLEGHFSNDDG--TELVRLASRCLQYEPRERPNAKSLV 173
P + F+ D L SR L++ P +RP + ++
Sbjct: 203 P------FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 253
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.6 bits (229), Expect = 5e-22
Identities = 37/195 (18%), Positives = 73/195 (37%), Gaps = 29/195 (14%)
Query: 1 MPNETLSKHLFHW--------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 52
M L +L P + +++A +A + Y ++ ++ DL
Sbjct: 105 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF-VHRDLAARN 163
Query: 53 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGT 106
+ +D ++ FG+ ++ + Y + + PE L+ G S V+SFG
Sbjct: 164 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV 223
Query: 107 LLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 161
+L ++ + P L + L D+C + L L C QY
Sbjct: 224 VLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------MLFELMRMCWQY 274
Query: 162 EPRERPNAKSLVASL 176
P+ RP+ +++S+
Sbjct: 275 NPKMRPSFLEIISSI 289
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.5 bits (229), Expect = 5e-22
Identities = 37/199 (18%), Positives = 76/199 (38%), Gaps = 20/199 (10%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
M + L ++ E + L +A+ + + +SK ++ DL + D+
Sbjct: 111 MKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF-VHRDLAARNCMLDEKFT 168
Query: 61 PRLSCFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLL 112
+++ FGL ++ D + S + + + E L+T + +S V+SFG LL +L+
Sbjct: 169 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 228
Query: 113 SGKHIPPSHALDLIRGKNFLMLMDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNA 169
+ P N + L+G L + +C + RP+
Sbjct: 229 TRGAPPYP-------DVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSF 281
Query: 170 KSLVASLTPLQKEAEVPSY 188
LV+ ++ + Y
Sbjct: 282 SELVSRISAIFSTFIGEHY 300
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.8 bits (227), Expect = 9e-22
Identities = 36/201 (17%), Positives = 72/201 (35%), Gaps = 22/201 (10%)
Query: 1 MPNETLSKHL--------------FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 46
P+ L L + + + A +A+ +DY S K ++
Sbjct: 93 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF-IHR 151
Query: 47 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVIPESVVYS 103
DL IL ++ +++ FGL + + + + E L S V+S
Sbjct: 152 DLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS 211
Query: 104 FGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 163
+G LL +++S P + + + E+ L +C + +P
Sbjct: 212 YGVLLWEIVSLGG-TPYCGMTC---AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKP 267
Query: 164 RERPNAKSLVASLTPLQKEAE 184
ERP+ ++ SL + +E +
Sbjct: 268 YERPSFAQILVSLNRMLEERK 288
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.9 bits (225), Expect = 1e-21
Identities = 35/194 (18%), Positives = 69/194 (35%), Gaps = 24/194 (12%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
L+K+L +N+ +K + + ++ + Y ++ DL +L
Sbjct: 89 AELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF-VHRDLAARNVLLVTQHY 145
Query: 61 PRLSCFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 113
++S FGL K R ++Y + + PE + + +S V+SFG L+ + S
Sbjct: 146 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
Query: 114 GKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 168
P S ++ + C E+ L + C Y+ RP
Sbjct: 206 YGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCWTYDVENRPG 256
Query: 169 AKSLVASLTPLQKE 182
++ L +
Sbjct: 257 FAAVELRLRNYYYD 270
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 91.1 bits (225), Expect = 2e-21
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 21/177 (11%)
Query: 16 QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 75
P+ A ++ +A +A + Y S + ++ DL T L ++ +++ FGL +N
Sbjct: 135 PPLSCAEQLCIARQVAAGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSA 193
Query: 76 KSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALD 124
Y + + + PPE + R ES V+++G +L ++ S P +
Sbjct: 194 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY 253
Query: 125 LIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181
+R N L ++C EL L C P +RP+ S+ L + +
Sbjct: 254 YVRDGNILACPENCPL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.3 bits (223), Expect = 2e-21
Identities = 31/183 (16%), Positives = 68/183 (37%), Gaps = 12/183 (6%)
Query: 9 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 68
++ V + +A + Y ++ + DL IL + + ++S FGL
Sbjct: 98 KFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV-HRDLAARNILVNSNLVCKVSDFGL 156
Query: 69 MKNSRDGKSYSTN-------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH 121
+ D + + +T PE + + S V+SFG ++ ++++ P
Sbjct: 157 SRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE 216
Query: 122 ALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181
+ + ++ D + + +L +C Q E RP +V+ L L +
Sbjct: 217 ----LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 272
Query: 182 EAE 184
+
Sbjct: 273 APD 275
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.6 bits (224), Expect = 3e-21
Identities = 25/190 (13%), Positives = 67/190 (35%), Gaps = 12/190 (6%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
MP L + + + + +A+ ++Y + ++ DL +L +
Sbjct: 92 MPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL-VHRDLAARNVLVKTPQH 149
Query: 61 PRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG 114
+++ FGL K + + + E + +S V+S+G + +L++
Sbjct: 150 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 209
Query: 115 KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVA 174
P D I +++ ++ + +C + RP + L+
Sbjct: 210 GSKPY----DGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 265
Query: 175 SLTPLQKEAE 184
+ + ++ +
Sbjct: 266 EFSKMARDPQ 275
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.5 bits (224), Expect = 3e-21
Identities = 37/212 (17%), Positives = 73/212 (34%), Gaps = 42/212 (19%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
M +L + L + + + +V++ + + L Y K + ++ D+ IL + G
Sbjct: 86 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 61 PRLSCFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKH-- 116
+L FG+ D + S ++ PE L+ +S ++S G L+++ G++
Sbjct: 144 IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Query: 117 --------------------------------IPPSHALDLIRGKNFLMLMDSCLEGHF- 143
S+ +D L+D +
Sbjct: 204 PPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPP 263
Query: 144 ---SNDDGTELVRLASRCLQYEPRERPNAKSL 172
S E ++CL P ER + K L
Sbjct: 264 KLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.8 bits (222), Expect = 5e-21
Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 12/172 (6%)
Query: 12 HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMK 70
+ + + + A +A+ +++ K H DL +L ++ FGL +
Sbjct: 155 EEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLAARNVLVTHGKVVKICDFGLAR 212
Query: 71 NSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD 124
+ +Y + + PE L G +S V+S+G LL ++ S P
Sbjct: 213 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP---G 269
Query: 125 LIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176
+ NF L+ + + E+ + C ++ R+RP+ +L + L
Sbjct: 270 IPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.0 bits (220), Expect = 7e-21
Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 23/188 (12%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
L K L + + + + + ++ + Y K ++ DL +L
Sbjct: 90 AGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYLEEKNF-VHRDLAARNVLLVNRHY 147
Query: 61 PRLSCFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 113
++S FGL K SY T L + PE + + S V+S+G + + LS
Sbjct: 148 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 207
Query: 114 GKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 168
P + I + C EL L S C Y+ +RP+
Sbjct: 208 YGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWIYKWEDRPD 258
Query: 169 AKSLVASL 176
++ +
Sbjct: 259 FLTVEQRM 266
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.3 bits (218), Expect = 1e-20
Identities = 39/192 (20%), Positives = 68/192 (35%), Gaps = 21/192 (10%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
L + + A + A L+ AL Y SK ++ D+ +L +
Sbjct: 89 CTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARNVLVSSNDC 146
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEY-----LRTGRVIPESVVYSFGTLLLDLLSGK 115
+L FGL + D Y + P ++ + R S V+ FG + ++L
Sbjct: 147 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 206
Query: 116 HIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAK 170
P + + I L + +C L L ++C Y+P RP
Sbjct: 207 VKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYDPSRRPRFT 257
Query: 171 SLVASLTPLQKE 182
L A L+ + +E
Sbjct: 258 ELKAQLSTILEE 269
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 88.5 bits (219), Expect = 1e-20
Identities = 33/176 (18%), Positives = 57/176 (32%), Gaps = 10/176 (5%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
H +P++ V Q L Y S ++ D+ IL + G
Sbjct: 97 CLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKAGNILLSEPGL 153
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHI 117
+L FG S+ + PE + G+ + V+S G ++L K
Sbjct: 154 VKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
Query: 118 PPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 173
+ + GH+S CLQ P++RP ++ L+
Sbjct: 214 LFNMNAMSALYHIAQNESPALQSGHWSE----YFRNFVDSCLQKIPQDRPTSEVLL 265
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.4 bits (218), Expect = 2e-20
Identities = 27/222 (12%), Positives = 66/222 (29%), Gaps = 40/222 (18%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-------DLNTYRI 53
+ +L +L + +++AL A L + + DL + I
Sbjct: 83 HEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI 139
Query: 54 LFDQDGNPRLSCFGLMKNSRDGKSY----STNLAFTP----PEYLRT------GRVIPES 99
L ++G ++ GL + T PE L +
Sbjct: 140 LVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA 199
Query: 100 VVYSFGTLLLDLLSGKHIPPSH---------------ALDLIRGKNFLMLMDSCLEGHFS 144
+Y+ G + ++ I H +++ +R + + +
Sbjct: 200 DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQ 259
Query: 145 NDDGT-ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 185
+ + + ++ C R A + +L+ L ++ +
Sbjct: 260 SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.6 bits (216), Expect = 3e-20
Identities = 37/199 (18%), Positives = 70/199 (35%), Gaps = 24/199 (12%)
Query: 1 MPNETLSKHLFHWENQ--------------PMKWAMRVRVALYLAQALDYCSSKGRALYH 46
LS +L N+ + + + +A+ +++ +S+ ++
Sbjct: 100 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHR 158
Query: 47 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESV 100
DL IL + ++ FGL ++ Y L + PE + +S
Sbjct: 159 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 218
Query: 101 VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 160
V+SFG LL ++ S P + + + F + + E+ + C
Sbjct: 219 VWSFGVLLWEIFSLGA-SPYPGVKID--EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 275
Query: 161 YEPRERPNAKSLVASLTPL 179
EP +RP LV L L
Sbjct: 276 GEPSQRPTFSELVEHLGNL 294
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.2 bits (213), Expect = 5e-20
Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 10/177 (5%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILF-DQD 58
M + TL +L + MK + + + L + ++ + H DL I
Sbjct: 94 MTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT 151
Query: 59 GNPRLSCFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKH 116
G+ ++ GL R + + F PE + VY+FG +L++ + ++
Sbjct: 152 GSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEY 210
Query: 117 IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 173
P S + + + + F E+ + C++ ER + K L+
Sbjct: 211 -PYSECQN--AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 264
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.5 bits (206), Expect = 7e-19
Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 19/187 (10%)
Query: 12 HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 71
M V QAL++ S ++ D+ + IL DG+ +L+ FG
Sbjct: 107 VVTETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQ 165
Query: 72 SRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR 127
+S + + TP PE + P+ ++S G + ++++ G+ PP + +R
Sbjct: 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLR 223
Query: 128 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL-----------VASL 176
+L+ + E +RCL + +R +AK L ++SL
Sbjct: 224 -ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSL 282
Query: 177 TPLQKEA 183
TPL A
Sbjct: 283 TPLIAAA 289
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.5 bits (203), Expect = 2e-18
Identities = 31/180 (17%), Positives = 65/180 (36%), Gaps = 10/180 (5%)
Query: 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 62
S + + + + + +A+ + + +SK ++ DL IL +
Sbjct: 127 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC-IHRDLAARNILLTHGRITK 185
Query: 63 LSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKH 116
+ FGL ++ ++ +Y + + PE + ES V+S+G L +L S
Sbjct: 186 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 245
Query: 117 IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 176
P + F ++ E+ + C +P +RP K +V +
Sbjct: 246 SPYPG---MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.8 bits (199), Expect = 5e-18
Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 16/193 (8%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
L + + M R L + Y G + D+ +L D+ N
Sbjct: 85 CSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGI-THRDIKPENLLLDERDN 141
Query: 61 PRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLS 113
++S FGL R L + PE L+ E V V+S G +L +L+
Sbjct: 142 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 201
Query: 114 GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 173
G+ + + + + + + L + L P R +
Sbjct: 202 GELPWDQPSDSCQ---EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIK 258
Query: 174 AS---LTPLQKEA 183
PL+K A
Sbjct: 259 KDRWYNKPLKKGA 271
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 80.5 bits (198), Expect = 5e-18
Identities = 35/181 (19%), Positives = 62/181 (34%), Gaps = 14/181 (7%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
M L +L E + ++ L + + + DL IL D D N
Sbjct: 92 MKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKLNIV-HRDLKPENILLDDDMN 148
Query: 61 PRLSCFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVI------PESVVYSFGTLLLDL 111
+L+ FG G+ ++ PE + E ++S G ++ L
Sbjct: 149 IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 208
Query: 112 LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKS 171
L+G PP + +M + +D + L SR L +P++R A+
Sbjct: 209 LAGS--PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE 266
Query: 172 L 172
Sbjct: 267 A 267
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.2 bits (197), Expect = 1e-17
Identities = 38/177 (21%), Positives = 64/177 (36%), Gaps = 17/177 (9%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
+ L H+ + A + L + SKG +Y DL IL D+DG+
Sbjct: 85 LNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLKLDNILLDKDGH 141
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFT----PPEYLRTGRVIPESVVYSFGTLLLDLLSGKH 116
+++ FG+ K + G + + T PE L + +SFG LL ++L G+
Sbjct: 142 IKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 201
Query: 117 IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG--TELVRLASRCLQYEPRERPNAKS 171
G++ L S + E L + EP +R +
Sbjct: 202 PFH--------GQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRG 250
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 80.5 bits (198), Expect = 2e-17
Identities = 31/177 (17%), Positives = 54/177 (30%), Gaps = 9/177 (5%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
M L + + E+ M V + + L + ++ DL I+F +
Sbjct: 105 MSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRS 162
Query: 61 PR--LSCFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 115
L FGL + +S F PE V + ++S G L LLSG
Sbjct: 163 NELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 222
Query: 116 HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
P + + D ++ + + + L +P R
Sbjct: 223 --SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQA 277
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.3 bits (195), Expect = 2e-17
Identities = 30/181 (16%), Positives = 59/181 (32%), Gaps = 14/181 (7%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
+ + +P+ + V AL+Y ++ DL ILF DG+
Sbjct: 91 CAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGD 148
Query: 61 PRLSCFGLMKNSRDGKSYST----NLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDL 111
+L+ FG+ + + PE + ++ V+S G L+++
Sbjct: 149 IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 208
Query: 112 LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKS 171
+ PP H L+ +R + + + +CL+ R
Sbjct: 209 AEIE--PPHHELNPMR-VLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQ 265
Query: 172 L 172
L
Sbjct: 266 L 266
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.0 bits (194), Expect = 2e-17
Identities = 37/193 (19%), Positives = 66/193 (34%), Gaps = 24/193 (12%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
P +L R A+ +A+ + Y SK ++ DL +L
Sbjct: 92 APLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAARNLLLATRDL 149
Query: 61 PRLSCFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 113
++ FGLM+ + A+ PE L+T S + FG L ++ +
Sbjct: 150 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
Query: 114 GKHIP-----PSHALDLI-RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 167
P S L I + L + C + ++ + +C ++P +RP
Sbjct: 210 YGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ---------DIYNVMVQCWAHKPEDRP 260
Query: 168 NAKSLVASLTPLQ 180
+L L Q
Sbjct: 261 TFVALRDFLLEAQ 273
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.5 bits (193), Expect = 5e-17
Identities = 27/183 (14%), Positives = 64/183 (34%), Gaps = 21/183 (11%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
+ + + + + + V + +AL + S + D+ I++ +
Sbjct: 83 ISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNIG-HFDIRPENIIYQTRRS 140
Query: 61 PR--LSCFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 115
+ FG + + G ++ + PE + V + ++S GTL+ LLSG
Sbjct: 141 STIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI 200
Query: 116 HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT------ELVRLASRCLQYEPRERPNA 169
+ + ++++ + ++ D+ E + R L E + R A
Sbjct: 201 N--------PFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTA 252
Query: 170 KSL 172
Sbjct: 253 SEA 255
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.0 bits (191), Expect = 7e-17
Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 11/181 (6%)
Query: 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNP 61
P S + H + + V A +A+ ++Y +SK ++ DL +L +D
Sbjct: 116 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVLVTEDNVM 174
Query: 62 RLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 115
+++ FGL ++ Y + + PE L +S V+SFG LL ++ +
Sbjct: 175 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 234
Query: 116 HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175
P + + + L+ ++ EL + C P +RP K LV
Sbjct: 235 G-SPYPGVPV---EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290
Query: 176 L 176
L
Sbjct: 291 L 291
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 76.7 bits (188), Expect = 3e-16
Identities = 40/178 (22%), Positives = 65/178 (36%), Gaps = 9/178 (5%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
M L HL ++ A A + L++ ++ +Y DL IL D+ G+
Sbjct: 89 MNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRFV-VYRDLKPANILLDEHGH 145
Query: 61 PRLSCFGLMKNSRDGKSYSTN--LAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGKHI 117
R+S GL + K +++ + PE L+ G S +S G +L LL G
Sbjct: 146 VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 205
Query: 118 PPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175
H + K+ + M + + EL L LQ + R A
Sbjct: 206 FRQHKT---KDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQ 260
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.4 bits (185), Expect = 4e-16
Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 19/188 (10%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
N L K++ + AL+Y K ++ DL IL ++D +
Sbjct: 90 AKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH 146
Query: 61 PRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG 114
+++ FG K S+ + PE L S +++ G ++ L++G
Sbjct: 147 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
Query: 115 KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT--ELVRLASRCLQYEPRERPNAKSL 172
PP R N ++ ++ + + + L + L + +R + +
Sbjct: 207 L--PP------FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 258
Query: 173 VASLTPLQ 180
Sbjct: 259 EGYGPLKA 266
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 74.4 bits (182), Expect = 7e-16
Identities = 37/184 (20%), Positives = 63/184 (34%), Gaps = 13/184 (7%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
+ TL + PM + V QAL++ G ++ D+ I+
Sbjct: 93 VDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNA 149
Query: 61 PRLSCFGLMKNSRDGKSYSTNL-------AFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 113
++ FG+ + D + T + PE R V S VYS G +L ++L+
Sbjct: 150 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 209
Query: 114 GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP-NAKSL 172
G+ PP + + D +L + + L P R A +
Sbjct: 210 GE--PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 267
Query: 173 VASL 176
A L
Sbjct: 268 RADL 271
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 75.5 bits (185), Expect = 8e-16
Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 9/177 (5%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QD 58
+ L + E+ M A + + L + ++ D+ I+ + +
Sbjct: 108 LSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEHSI-VHLDIKPENIMCETKKA 165
Query: 59 GNPRLSCFGLMKNSRDGKS---YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 115
+ ++ FGL + + F PE + V + +++ G L LLSG
Sbjct: 166 SSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL 225
Query: 116 HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
P D + + D + + E LQ EPR+R
Sbjct: 226 --SPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 280
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 73.9 bits (181), Expect = 1e-15
Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 9/177 (5%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRA--LYHDLNTYRILFDQD 58
+ L + E R+ + A+ Y G N D+D
Sbjct: 89 VSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDED 146
Query: 59 GNPRLSCFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 115
+S FGL K G ST + PE L +S G + LL G
Sbjct: 147 SKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 206
Query: 116 HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
PP + + + ++ + + + +D ++ +P +R +
Sbjct: 207 --PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQA 261
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.4 bits (177), Expect = 3e-15
Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 18/176 (10%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-G 59
E ++ + + +A+ +C + G L+ D+ IL D + G
Sbjct: 91 PEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGV-LHRDIKDENILIDLNRG 148
Query: 60 NPRLSCFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGKH 116
+L FG +D + ++PPE++R R S V+S G LL D++ G
Sbjct: 149 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
Query: 117 IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
P H ++IRG+ F F +E L CL P +RP + +
Sbjct: 209 -PFEHDEEIIRGQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.2 bits (179), Expect = 4e-15
Identities = 35/201 (17%), Positives = 71/201 (35%), Gaps = 15/201 (7%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---Q 57
+ L + +Q + + +A+ Y S A + D+ +L+
Sbjct: 91 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA-HRDVKPENLLYTSKRP 149
Query: 58 DGNPRLSCFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG 114
+ +L+ FG K + S +T + PE L + ++S G ++ LL G
Sbjct: 150 NAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 209
Query: 115 KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT----ELVRLASRCLQYEPRERPNAK 170
PP ++ + + + F N + + E+ L L+ EP +R
Sbjct: 210 Y--PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 267
Query: 171 SLVAS--LTPLQKEAEVPSYT 189
+ + K + P +T
Sbjct: 268 EFMNHPWIMQSTKVPQTPLHT 288
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 71.7 bits (175), Expect = 1e-14
Identities = 33/170 (19%), Positives = 60/170 (35%), Gaps = 12/170 (7%)
Query: 9 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 68
++Q + A + AL+Y SK +Y DL IL D++G+ +++ FG
Sbjct: 92 FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGF 150
Query: 69 MKNSRD-GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR 127
K D + + PE + T +SFG L+ ++L+G
Sbjct: 151 AKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY-------- 202
Query: 128 GKNFLMLMDSCLEGHFSNDDGT--ELVRLASRCLQYEPRERPNAKSLVAS 175
N + + L ++ L SR + + +R
Sbjct: 203 DSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTE 252
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 70.3 bits (171), Expect = 3e-14
Identities = 26/197 (13%), Positives = 55/197 (27%), Gaps = 18/197 (9%)
Query: 9 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSC 65
LF++ ++ + +A + ++Y SK ++ D+ L + +
Sbjct: 91 DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF-IHRDVKPDNFLMGLGKKGNLVYIID 149
Query: 66 FGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG 114
FGL K RD +++ + + S G +L+ G
Sbjct: 150 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 209
Query: 115 KHIPPSHALDLIRGKNFLMLMD--SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
R K + S +E + C ++P+ L
Sbjct: 210 SLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYL 269
Query: 173 VASL-TPLQKEAEVPSY 188
++ Y
Sbjct: 270 RQLFRNLFHRQGFSYDY 286
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.9 bits (170), Expect = 4e-14
Identities = 31/189 (16%), Positives = 58/189 (30%), Gaps = 25/189 (13%)
Query: 8 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 67
+L + + L + LD+ S ++ DL IL G +L+ FG
Sbjct: 103 TYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFG 161
Query: 68 LMKNSRDGKSYSTN---LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI------- 117
L + + ++ L + PE L ++S G + ++ K +
Sbjct: 162 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 221
Query: 118 --------------PPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 163
D+ + + F D L +CL + P
Sbjct: 222 DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP 281
Query: 164 RERPNAKSL 172
+R +A S
Sbjct: 282 AKRISAYSA 290
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.0 bits (168), Expect = 6e-14
Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 12/179 (6%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
+ L E + + + + Y S A + DL I+
Sbjct: 95 VAGGELFDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQIA-HFDLKPENIMLLDRNV 151
Query: 61 PR----LSCFGLMKNSRDGKSYSTNL---AFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 113
P+ + FGL G + F PE + + E+ ++S G + LLS
Sbjct: 152 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211
Query: 114 GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
G + ++ E + ++ R L +P++R +
Sbjct: 212 GASPFLGDTKQETLAN--VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDS 268
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.2 bits (163), Expect = 3e-13
Identities = 36/192 (18%), Positives = 58/192 (30%), Gaps = 30/192 (15%)
Query: 9 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 68
+ + + + L Q L+Y + DL +L D++G +L+ FGL
Sbjct: 88 VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL-HRDLKPNNLLLDENGVLKLADFGL 146
Query: 69 MKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPSH-- 121
K+ T+ T PE L R+ V +++ G +L +LL P
Sbjct: 147 AKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD 206
Query: 122 ---------------------ALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 160
L F L FS +L+ L
Sbjct: 207 LDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAG-DDLLDLIQGLFL 265
Query: 161 YEPRERPNAKSL 172
+ P R A
Sbjct: 266 FNPCARITATQA 277
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.5 bits (156), Expect = 2e-12
Identities = 36/200 (18%), Positives = 69/200 (34%), Gaps = 29/200 (14%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
++ L K + + + L Q L +C S R L+ DL +L + +G
Sbjct: 82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 140
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFT-----PPEYLRTGRVIPESVVYSFGTLLLDLLSGK 115
+L+ FGL + T+ T P L ++S G + ++++ +
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 116 HI-PPSHALDLIR--GKNFLMLMDSCLEGHFSNDD--------------------GTELV 152
+ P +D + + + G S D +
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 260
Query: 153 RLASRCLQYEPRERPNAKSL 172
L S+ L Y+P +R +AK+
Sbjct: 261 SLLSQMLHYDPNKRISAKAA 280
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.1 bits (155), Expect = 4e-12
Identities = 26/191 (13%), Positives = 63/191 (32%), Gaps = 28/191 (14%)
Query: 9 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 68
+++ + + + + L Y + G + DL + ++D ++ FGL
Sbjct: 109 LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII-HRDLKPGNLAVNEDCELKILDFGL 167
Query: 69 MKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGKHI--------- 117
+ + Y + PE + ++V ++S G ++ ++++GK +
Sbjct: 168 ARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ 227
Query: 118 ----------PPSHALDLIRGKNFLMLMDSCLE------GHFSNDDGTELVRLASRCLQY 161
PP+ + ++ M E + V L + L
Sbjct: 228 LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVL 287
Query: 162 EPRERPNAKSL 172
+ +R A
Sbjct: 288 DAEQRVTAGEA 298
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.1 bits (155), Expect = 4e-12
Identities = 32/207 (15%), Positives = 69/207 (33%), Gaps = 37/207 (17%)
Query: 1 MPNETLSKHLFHW-ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG 59
+ + L+ + Q + + + L Y S L+ DL +L +
Sbjct: 88 LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV-LHRDLKPSNLLLNTTC 146
Query: 60 NPRLSCFGLMKNSRDGKSYST-------NLAFTPPEYLRTGRVIPESV-VYSFGTLLLDL 111
+ ++ FGL + + ++ + PE + + +S+ ++S G +L ++
Sbjct: 147 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 206
Query: 112 LSGKHI-------------------PPSHALDLIRGKNFLMLMDSC-------LEGHFSN 145
LS + I P L+ I + S F N
Sbjct: 207 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 266
Query: 146 DDGTELVRLASRCLQYEPRERPNAKSL 172
D ++ + L + L + P +R +
Sbjct: 267 AD-SKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 63.7 bits (154), Expect = 5e-12
Identities = 19/193 (9%), Positives = 41/193 (21%), Gaps = 19/193 (9%)
Query: 8 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-----QDGNPR 62
+ L + A + + K +Y D+ L
Sbjct: 88 EDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIY 146
Query: 63 LSCFGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVIPESVVYSFGTLLLDL 111
+ FG++K RD + + + + G + +
Sbjct: 147 VVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYF 206
Query: 112 LSGKHIPPSHALDLIRGKNFLMLM--DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 169
L G + K + S E + P+
Sbjct: 207 LRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDY 266
Query: 170 KSLVASLTPLQKE 182
L + + +
Sbjct: 267 DYLQGLFSKVLER 279
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.3 bits (153), Expect = 7e-12
Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 17/181 (9%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
L HL + A + AL+Y S+ +Y D+ ++ D+DG+
Sbjct: 87 ANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHSRDV-VYRDIKLENLMLDKDGH 143
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKH 116
+++ FGL K + TP PE L + G ++ +++ G+
Sbjct: 144 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
Query: 117 IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG--TELVRLASRCLQYEPRERPNAKSLVA 174
++ L + L E L + L+ +P++R A
Sbjct: 204 PFY--------NQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 175 S 175
Sbjct: 256 K 256
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 62.9 bits (152), Expect = 1e-11
Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 8/166 (4%)
Query: 11 FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 70
A + +Y S +Y DL +L DQ G +++ FG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 71 NSRD-GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK 129
+ + PE + + ++ G L+ ++ +G PP A I+
Sbjct: 190 RVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY--PPFFADQPIQIY 247
Query: 130 NFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175
++ HFS+ +L L LQ + +R +
Sbjct: 248 EKIVSGKVRFPSHFSS----DLKDLLRNLLQVDLTKRFGNLKNGVN 289
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.3 bits (150), Expect = 1e-11
Identities = 28/193 (14%), Positives = 54/193 (27%), Gaps = 30/193 (15%)
Query: 9 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 68
F N + + L + L +C S+ L+ DL +L +++G +L+ FGL
Sbjct: 89 KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV-LHRDLKPQNLLINRNGELKLANFGL 147
Query: 69 MKNSRDGKSYSTNLAFT-----PPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP----- 118
+ + T P ++S G + +L +
Sbjct: 148 ARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 207
Query: 119 -------------------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159
L K + M + + L L
Sbjct: 208 VDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLL 267
Query: 160 QYEPRERPNAKSL 172
+ P +R +A+
Sbjct: 268 KCNPVQRISAEEA 280
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.1 bits (150), Expect = 2e-11
Identities = 38/202 (18%), Positives = 57/202 (28%), Gaps = 32/202 (15%)
Query: 1 MPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQD 58
+P + Q + L ++L Y S G + H D+ +L D D
Sbjct: 101 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPD 158
Query: 59 GNP-RLSCFGLMKNSRDGKSYSTNLAFT----PPEYLRTGRVIPESVVYSFGTLLLDLLS 113
+L FG K G+ + + P V+S G +L +LL
Sbjct: 159 TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 218
Query: 114 GKHI----PPSHALDLI-------------------RGKNFLMLMDSCLEGHFSNDDGTE 150
G+ I L I F + F E
Sbjct: 219 GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 278
Query: 151 LVRLASRCLQYEPRERPNAKSL 172
+ L SR L+Y P R
Sbjct: 279 AIALCSRLLEYTPTARLTPLEA 300
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 59.9 bits (144), Expect = 7e-11
Identities = 30/194 (15%), Positives = 66/194 (34%), Gaps = 29/194 (14%)
Query: 7 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66
K L ++ L L + YC + L+ DL +L +++G +++ F
Sbjct: 86 LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADF 144
Query: 67 GLMKNSRDG----KSYSTNLAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPS- 120
GL + L + P+ L + ++ ++S G + ++++G + P
Sbjct: 145 GLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV 204
Query: 121 ----------------------HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158
+ +L + + + F + L S+
Sbjct: 205 SEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM 264
Query: 159 LQYEPRERPNAKSL 172
L+ +P +R AK
Sbjct: 265 LKLDPNQRITAKQA 278
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.2 bits (137), Expect = 7e-10
Identities = 35/182 (19%), Positives = 58/182 (31%), Gaps = 12/182 (6%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
+ L HL E + AL++ G +Y D+ IL D +G+
Sbjct: 111 INGGELFTHLSQRERFTEHEVQIY--VGEIVLALEHLHKLG-IIYRDIKLENILLDSNGH 167
Query: 61 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVI-------PESVVYSFGTLLLDLLS 113
L+ FGL K ++ EY+ V +S G L+ +LL+
Sbjct: 168 VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 227
Query: 114 GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 173
G P + + E + + L R L +P++R
Sbjct: 228 GA--SPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRD 285
Query: 174 AS 175
A
Sbjct: 286 AD 287
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.8 bits (136), Expect = 9e-10
Identities = 31/199 (15%), Positives = 59/199 (29%), Gaps = 36/199 (18%)
Query: 9 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 68
L + RV L L Y L+ D+ +L +DG +L+ FGL
Sbjct: 105 GLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGL 163
Query: 69 MKNSRDGKSYSTN--------LAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPP 119
+ K+ N L + PPE L R + ++ G ++ ++ + I
Sbjct: 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 223
Query: 120 SHALDLIRGKNFLMLMDSCLEGHFSNDDGT--------------------------ELVR 153
+ + E + D+ +
Sbjct: 224 GNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALD 283
Query: 154 LASRCLQYEPRERPNAKSL 172
L + L +P +R ++
Sbjct: 284 LIDKLLVLDPAQRIDSDDA 302
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 56.6 bits (135), Expect = 1e-09
Identities = 31/213 (14%), Positives = 70/213 (32%), Gaps = 49/213 (23%)
Query: 9 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNP------R 62
+ +E++ + +++ L LDY + ++ D+ +L + +P +
Sbjct: 113 LIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK 172
Query: 63 LSCFGLMKNSRDGKSYS-TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI-PPS 120
++ G + + S + PE L + ++S L+ +L++G + P
Sbjct: 173 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 232
Query: 121 HALDLIRGKNFLMLMDSCL----------------------------------------- 139
+ + + + L
Sbjct: 233 EGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTE 292
Query: 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 172
+ FS D+ E+ S LQ +PR+R +A L
Sbjct: 293 KYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 325
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.4 bits (122), Expect = 6e-08
Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 28/188 (14%)
Query: 12 HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL-MK 70
+ Q + + + + L Y S + DL + ++D ++ FGL
Sbjct: 112 IVKCQKLTDDHVQFLIYQILRGLKYIHSADII-HRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 71 NSRDGKSYSTNLAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGKH------------- 116
+ Y + PE + ++V ++S G ++ +LL+G+
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 117 ------IPPSHALDLIR---GKNFLMLMDSCLEGHFSN---DDGTELVRLASRCLQYEPR 164
P + L I +N++ + + +F+N V L + L +
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
Query: 165 ERPNAKSL 172
+R A
Sbjct: 291 KRITAAQA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 50.6 bits (120), Expect = 1e-07
Identities = 34/209 (16%), Positives = 69/209 (33%), Gaps = 43/209 (20%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
+ N + Q + + +ALDYC S G + D+ + ++ D +
Sbjct: 114 VNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIM-HRDVKPHNVMIDHEHR 167
Query: 61 P-RLSCFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGK 115
RL +GL + G+ Y+ F PE L ++ S+ ++S G +L ++ K
Sbjct: 168 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 227
Query: 116 H--------------------------------IPPSHALDLIRGKNFLMLMDSCLEGHF 143
I + I G++ + +
Sbjct: 228 EPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSEN 287
Query: 144 SNDDGTELVRLASRCLQYEPRERPNAKSL 172
+ E + + L+Y+ + R A+
Sbjct: 288 QHLVSPEALDFLDKLLRYDHQSRLTAREA 316
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 45.3 bits (106), Expect = 2e-06
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQV 315
K++G+ F + +P A CY I + + R LCYL P++AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 316 ISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 357
+ A + + ++A L+ +L ++ N
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 108
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 128 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.3 bits (88), Expect = 3e-04
Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Query: 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGD 309
++ L K+ G+ A++ KDF TA++ Y + + T + Y +
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCREL 60
Query: 310 AMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKD 346
+A + + + A A +G + +E KD
Sbjct: 61 CEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKD 97
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.9 bits (92), Expect = 3e-04
Identities = 23/211 (10%), Positives = 61/211 (28%), Gaps = 40/211 (18%)
Query: 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 60
+ E + +L + + + + + S G ++ DL I+ D
Sbjct: 99 LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI-IHRDLKPSNIVVKSDCT 157
Query: 61 PRLSCFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI 117
++ FGL + + + + PE + ++S G ++ +++ K +
Sbjct: 158 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 217
Query: 118 ----PPSHALDLI------RGKNFLMLMDSCLEGHFSN---------------------- 145
+ + F+ + + + N
Sbjct: 218 FPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS 277
Query: 146 ----DDGTELVRLASRCLQYEPRERPNAKSL 172
++ L S+ L +P +R +
Sbjct: 278 EHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 168 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Score = 36.9 bits (84), Expect = 0.002
Identities = 20/137 (14%), Positives = 40/137 (29%), Gaps = 20/137 (14%)
Query: 241 SFQMWTDQIQETLNS-KKRGDAAFRAKDFPTAIECYTHFI--------------DGGTMV 285
S++M T + E K++G F+ + A+ Y +
Sbjct: 3 SWEMDTKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESF 62
Query: 286 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 345
F +CYL +A+ +A + Y + A + A+ +
Sbjct: 63 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFE 122
Query: 346 -----DGTNLEAKKHRN 357
+ N A+
Sbjct: 123 KVLEVNPQNKAARLQIF 139
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.2 bits (82), Expect = 0.002
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 20/135 (14%)
Query: 241 SFQMWTDQ-IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS------------- 286
S++M +++ ++++ K+RG F+ + A+ Y + S
Sbjct: 1 SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL 60
Query: 287 -PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 345
+C+L A+ +A + + + A + A+ +
Sbjct: 61 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQ 120
Query: 346 -----DGTNLEAKKH 355
N AK
Sbjct: 121 KVLQLYPNNKAAKTQ 135
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} Length = 159 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.8 bits (81), Expect = 0.003
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQV 315
K + + F+AKD+ AI+ Y+ I+ + + R L YL ++ ALGDA +A
Sbjct: 14 KTQANDYFKAKDYENAIKFYSQAIE-LNPSNAIYYGNRSLAYLRTECYGYALGDATRAIE 72
Query: 316 ISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLE 351
+ + +Y +AA+ LG A + ++
Sbjct: 73 LDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 108
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} Length = 153 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Score = 35.4 bits (80), Expect = 0.004
Identities = 21/127 (16%), Positives = 40/127 (31%), Gaps = 16/127 (12%)
Query: 241 SFQMWTDQ-IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP------------ 287
+ ++ +Q + K+ G+ F+ + AI Y +D
Sbjct: 5 IYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKN 64
Query: 288 ---TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETL 344
+ CY + +A+ A + I + A Y A G +A+E L
Sbjct: 65 IEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENL 124
Query: 345 KDGTNLE 351
+L
Sbjct: 125 YKAASLN 131
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 357 | |||
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.98 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.97 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.97 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.97 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.96 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.86 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.83 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.82 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.79 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.77 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.76 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.73 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.73 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.69 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.68 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.67 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.64 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.61 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.59 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.58 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.56 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.55 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.52 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.48 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.45 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.44 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.44 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.41 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.36 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.32 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.32 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.31 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.25 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.23 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.23 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.21 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.19 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.19 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.19 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.18 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.08 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.05 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 99.03 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.98 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.93 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.92 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.85 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.82 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.76 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.6 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.58 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.58 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.55 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.4 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.33 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.28 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.19 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 98.1 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.08 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.9 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.61 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.35 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 93.76 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 93.14 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 92.36 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 90.08 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 89.98 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 88.62 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 86.82 | |
| d1wr0a1 | 77 | Vacuolar sorting protein 4b (VPS4B, SKD1 protein) | 86.71 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 84.11 | |
| d1qsaa1 | 450 | 70 KDa soluble lytic transglycosylase (SLT70), sup | 82.69 | |
| d2cfua2 | 505 | Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI | 80.03 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-42 Score=302.91 Aligned_cols=180 Identities=22% Similarity=0.249 Sum_probs=141.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++.. .+..+++.+++.|+.||++||.|||+++ ||||||||+||||+.++.+||+|||+++.....
T Consensus 85 ~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~ 162 (276)
T d1uwha_ 85 CEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162 (276)
T ss_dssp CCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTSSEEECCCCCSCC---------
T ss_pred CCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCC-EeccccCHHHEEEcCCCCEEEccccceeeccccCCccc
Confidence 579999999953 4567999999999999999999999999 999999999999999999999999999765432
Q ss_pred -CccccCCCCCCcccccc---CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
.+..||+.|||||++.+ +.++.++|||||||++|||+||+.||.........................+..+++.+
T Consensus 163 ~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l 242 (276)
T d1uwha_ 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242 (276)
T ss_dssp ---CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHH
T ss_pred ccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHH
Confidence 24578999999999965 35788999999999999999999998753211110000111111111123455678899
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 152 VRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+||.+||..||++|||+.+|+++|+.+.+.
T Consensus 243 ~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 243 KRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 9999999999999999999999999987654
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-41 Score=290.08 Aligned_cols=166 Identities=21% Similarity=0.303 Sum_probs=141.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--Ccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~ 78 (357)
++||+|.+++. ..+.+++.++..++.||++||.|||+++ ||||||||+|||++.++.+||+|||+++..... ...
T Consensus 88 ~~~g~L~~~l~--~~~~l~e~~~~~i~~qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 164 (263)
T d2j4za1 88 APLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 164 (263)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEET
T ss_pred cCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeeeeccccceecCCCCEeecccceeeecCCCccccc
Confidence 58999999995 4568999999999999999999999999 999999999999999999999999999866543 345
Q ss_pred ccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 79 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
.||+.|+|||++.+..++.++|||||||++|+|++|+.||........... .... ...++..+++++.+||.+|
T Consensus 165 ~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~li~~~ 238 (263)
T d2j4za1 165 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR----ISRV--EFTFPDFVTEGARDLISRL 238 (263)
T ss_dssp TEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHTT--CCCCCTTSCHHHHHHHHHH
T ss_pred CCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHH----HHcC--CCCCCccCCHHHHHHHHHH
Confidence 799999999999998999999999999999999999999876532222111 1111 1234556778999999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 018381 159 LQYEPRERPNAKSLVAS 175 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~ 175 (357)
|+.||++|||+.++++|
T Consensus 239 L~~dp~~R~t~~eil~h 255 (263)
T d2j4za1 239 LKHNPSQRPMLREVLEH 255 (263)
T ss_dssp TCSSGGGSCCHHHHHTC
T ss_pred ccCCHhHCcCHHHHHcC
Confidence 99999999999999986
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-41 Score=291.71 Aligned_cols=174 Identities=18% Similarity=0.285 Sum_probs=135.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~ 159 (263)
T d1sm2a_ 82 MEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 159 (263)
T ss_dssp CTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCTTCSGGGEEECGGGCEEECSCC-------------
T ss_pred cCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhccc-eeecccchhheeecCCCCeEecccchheeccCCCceee
Confidence 589999999853 5677999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcc-hhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH-ALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....||+.|+|||++.+..++.++|||||||++|||+|+..|+... ....+ ...+....+...|..+++++.+|
T Consensus 160 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~-----~~~i~~~~~~~~p~~~~~~l~~l 234 (263)
T d1sm2a_ 160 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-----VEDISTGFRLYKPRLASTHVYQI 234 (263)
T ss_dssp -----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHH-----HHHHHHTCCCCCCTTSCHHHHHH
T ss_pred cceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHH-----HHHHHhcCCCCCccccCHHHHHH
Confidence 2346789999999999999999999999999999999965555432 11111 11122223334456678899999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
|.+||+.||++|||+++|+++|+.+.+
T Consensus 235 i~~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 235 MNHCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 999999999999999999999988754
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=9e-41 Score=295.88 Aligned_cols=174 Identities=20% Similarity=0.242 Sum_probs=137.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
|+||+|.+++. ...+.+++.+++.++.||++||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 109 ~~~g~L~~~~~-~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~ 186 (299)
T d1jpaa_ 109 MENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 186 (299)
T ss_dssp CTTEEHHHHHH-TTTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred cCCCcceeeec-cccCCCCHHHHHHHHHHHHHHHHHHhhCC-CccCccccceEEECCCCcEEECCcccceEccCCCCcce
Confidence 68999999985 35668999999999999999999999999 9999999999999999999999999998654321
Q ss_pred -----ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 77 -----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 77 -----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...||+.|+|||++.++.++.++|||||||++|||+| |+.||......... ..+....+.+.+..+++.
T Consensus 187 ~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~-----~~i~~~~~~~~~~~~~~~ 261 (299)
T d1jpaa_ 187 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI-----NAIEQDYRLPPPMDCPSA 261 (299)
T ss_dssp ---------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-----HHHHTTCCCCCCTTCCHH
T ss_pred eeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCCCCccchHH
Confidence 1346889999999999999999999999999999998 78887654322211 112222333456678889
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
+.+||.+||+.||++|||+.+|++.|+.+.+
T Consensus 262 l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~ 292 (299)
T d1jpaa_ 262 LHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292 (299)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 9999999999999999999999999987654
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=8.3e-41 Score=294.40 Aligned_cols=177 Identities=19% Similarity=0.258 Sum_probs=147.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~ 173 (287)
T d1opja_ 95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 173 (287)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEE
T ss_pred ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC-cccCccccCeEEECCCCcEEEccccceeecCCCCceee
Confidence 57999999997666789999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
...||+.|+|||++.++.++.++|||||||++|||++|..||...... ..+...+......+.+..+++.+.+||
T Consensus 174 ~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~l~~li 249 (287)
T d1opja_ 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----SQVYELLEKDYRMERPEGCPEKVYELM 249 (287)
T ss_dssp TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH----HHHHHHHhcCCCCCCCccchHHHHHHH
Confidence 234788999999999999999999999999999999987776543111 111122223334456677889999999
Q ss_pred HHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 156 SRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+||+.||++|||+.+|++.|+.+...
T Consensus 250 ~~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 250 RACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred HHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 999999999999999999998876543
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-41 Score=294.30 Aligned_cols=176 Identities=20% Similarity=0.295 Sum_probs=144.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++....+..+++.+++.|+.||++||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 89 ~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~-ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~ 167 (272)
T d1qpca_ 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167 (272)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred CCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccchhheeeecccceeeccccceEEccCCccccc
Confidence 58999999886444557999999999999999999999999 999999999999999999999999999866543
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
....||+.|+|||++.++.++.++|||||||++|||+||..|+....... .....+....+...+..+++++.+||
T Consensus 168 ~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~----~~~~~i~~~~~~~~p~~~~~~l~~li 243 (272)
T d1qpca_ 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYRMVRPDNCPEELYQLM 243 (272)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred cccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH----HHHHHHHhcCCCCCcccChHHHHHHH
Confidence 23467899999999998899999999999999999999776654331111 01111122233345567788999999
Q ss_pred HHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 156 SRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
.+||+.||++|||+.+|++.|+.+..
T Consensus 244 ~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 244 RLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 99999999999999999998876543
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-41 Score=299.62 Aligned_cols=172 Identities=20% Similarity=0.298 Sum_probs=141.5
Q ss_pred CCCCchhhhhccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC
Q 018381 1 MPNETLSKHLFHWE---------------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG 59 (357)
Q Consensus 1 ~~~gsL~~~l~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~ 59 (357)
++||+|.++|..+. ...+++.+++.++.||++||.|||+++ ||||||||+|||++.++
T Consensus 123 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-IiHRDlKp~Nill~~~~ 201 (325)
T d1rjba_ 123 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVLVTHGK 201 (325)
T ss_dssp CTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEEETTT
T ss_pred CCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCchhccccccCC
Confidence 58999999996432 246899999999999999999999999 99999999999999999
Q ss_pred CeEEecCCcccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccc
Q 018381 60 NPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFL 132 (357)
Q Consensus 60 ~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~ 132 (357)
.+||+|||+++...... +..||+.|+|||++.++.++.++|||||||++|||+| |+.||.+.... ..+.
T Consensus 202 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~----~~~~ 277 (325)
T d1rjba_ 202 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD----ANFY 277 (325)
T ss_dssp EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----HHHH
T ss_pred eEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHH----HHHH
Confidence 99999999998654332 3457899999999999999999999999999999997 88887653211 1112
Q ss_pred cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhC
Q 018381 133 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 177 (357)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~ 177 (357)
..+....+.+.+..+++++.+||.+||+.||++|||+.+|+++|.
T Consensus 278 ~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 278 KLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 222333344566778899999999999999999999999999984
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-40 Score=290.49 Aligned_cols=168 Identities=17% Similarity=0.217 Sum_probs=139.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ++.+++.++..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... .
T Consensus 99 ~~gg~L~~~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 174 (293)
T d1yhwa1 99 LAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (293)
T ss_dssp CTTCBHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred cCCCcHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCcHHHeEECCCCcEeeccchhheeecccccccc
Confidence 58999999883 457999999999999999999999999 999999999999999999999999999865432 3
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||.+........... .........+..+++.+.+||.
T Consensus 175 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~li~ 251 (293)
T d1yhwa1 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNGTPELQNPEKLSAIFRDFLN 251 (293)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HHCSCCCSSGGGSCHHHHHHHH
T ss_pred ccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHH---hCCCCCCCCcccCCHHHHHHHH
Confidence 4579999999999999999999999999999999999999987542211111000 0111122345567889999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||+.||++|||+.++++|
T Consensus 252 ~~L~~dP~~R~s~~eil~H 270 (293)
T d1yhwa1 252 RCLDMDVEKRGSAKELLQH 270 (293)
T ss_dssp HHTCSSTTTSCCHHHHTTC
T ss_pred HHccCChhHCcCHHHHhcC
Confidence 9999999999999999886
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-40 Score=291.77 Aligned_cols=173 Identities=18% Similarity=0.234 Sum_probs=144.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++. ..+..+++.++..++.||++||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 90 ~~~g~L~~~l~-~~~~~l~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~ 167 (285)
T d1u59a_ 90 AGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 167 (285)
T ss_dssp CTTEEHHHHHT-TCTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CCCCcHHHHhh-ccccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCcCchhheeeccCCceeeccchhhhcccccccccc
Confidence 58999999984 35578999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...||+.|+|||++.++.++.++|||||||++|||+| |+.||.......+ ...+....+.+.+..+++++.
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~-----~~~i~~~~~~~~p~~~~~~l~ 242 (285)
T d1u59a_ 168 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-----MAFIEQGKRMECPPECPPELY 242 (285)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH-----HHHHHTTCCCCCCTTCCHHHH
T ss_pred cccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCcCCHHHH
Confidence 3457899999999999999999999999999999998 8888765422211 122222233455677889999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
+||.+||+.||++|||+.+|++.|+...
T Consensus 243 ~li~~cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 243 ALMSDCWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 9999999999999999999999887543
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-40 Score=288.14 Aligned_cols=169 Identities=17% Similarity=0.131 Sum_probs=136.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC------
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 74 (357)
++||+|.++|. ..+.+++.++..++.||++||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 85 ~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~-IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~ 161 (271)
T d1nvra_ 85 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 161 (271)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CccCcccHHHEEECCCCCEEEccchhheeeccCCcccc
Confidence 57999999994 5678999999999999999999999999 99999999999999999999999999986532
Q ss_pred CCccccCCCCCCccccccCCC-CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 75 GKSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 75 ~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
..+..||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......... ...............+++++.+
T Consensus 162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~s~~~~~ 238 (271)
T d1nvra_ 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY---SDWKEKKTYLNPWKKIDSAPLA 238 (271)
T ss_dssp BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHH---HHHHTTCTTSTTGGGSCHHHHH
T ss_pred ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHH---HHHhcCCCCCCccccCCHHHHH
Confidence 234579999999999988776 578999999999999999999986532111100 0111111111223456788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
||.+||+.||++|||+.++++|
T Consensus 239 li~~~L~~dP~~R~t~~eil~h 260 (271)
T d1nvra_ 239 LLHKILVENPSARITIPDIKKD 260 (271)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHcCCChhHCcCHHHHhcC
Confidence 9999999999999999999886
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-40 Score=294.69 Aligned_cols=176 Identities=20% Similarity=0.276 Sum_probs=136.8
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
++||+|.++|..+. ...+++.+++.++.||++||.|||+++ ||||||||+||||+.++.+||+||
T Consensus 100 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~-ivHrDlKp~NILl~~~~~~Kl~DF 178 (299)
T d1ywna1 100 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDF 178 (299)
T ss_dssp CTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECC-
T ss_pred cCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC-CcCCcCCccceeECCCCcEEEccC
Confidence 58999999996421 346899999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCC-CCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKH-IPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++..... ....||+.|+|||++.++.++.++|||||||++|||++|.. ||...... ..+...+....
T Consensus 179 Gla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~----~~~~~~~~~~~ 254 (299)
T d1ywna1 179 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGT 254 (299)
T ss_dssp -----CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS----HHHHHHHHHTC
T ss_pred cchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH----HHHHHHHhcCC
Confidence 999854432 23468999999999999999999999999999999999865 44332111 01111222223
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
....+..+++++.++|.+||+.||++|||+.+++++|+.+.+
T Consensus 255 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq 296 (299)
T d1ywna1 255 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296 (299)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 334566778899999999999999999999999999987643
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-40 Score=290.04 Aligned_cols=171 Identities=19% Similarity=0.243 Sum_probs=142.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
++||+|.+++. ....+++.+++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++......
T Consensus 89 ~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~-iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 165 (277)
T d1xbba_ 89 AELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165 (277)
T ss_dssp CTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred CCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhCC-cccCCCcchhhcccccCcccccchhhhhhccccccccc
Confidence 58999999995 4678999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...||+.|+|||++.++.++.++|||||||++|||+| |+.||.+.....+ ...+....+.+.+..+++++.
T Consensus 166 ~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~-----~~~i~~~~~~~~p~~~~~~~~ 240 (277)
T d1xbba_ 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-----TAMLEKGERMGCPAGCPREMY 240 (277)
T ss_dssp C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----HHHHHTTCCCCCCTTCCHHHH
T ss_pred cccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCcccCHHHH
Confidence 2357899999999999999999999999999999998 8888765432221 122222233445667889999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
+||.+||+.||++|||+.+|++.|+..
T Consensus 241 ~li~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 241 DLMNLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence 999999999999999999998877653
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-40 Score=290.02 Aligned_cols=170 Identities=21% Similarity=0.284 Sum_probs=132.0
Q ss_pred CCCCchhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCC----CceeecCCCCCeeeCCCCCeEEecCCcccccCC
Q 018381 1 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKG----RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 74 (357)
Q Consensus 1 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~----~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 74 (357)
++||+|.+++.+ +.++.+++.+++.++.||+.||.|||+++ +||||||||+|||++.++.+||+|||+++....
T Consensus 87 ~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~ 166 (269)
T d2java1 87 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 166 (269)
T ss_dssp CTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC--
T ss_pred CCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeeccc
Confidence 579999999853 24578999999999999999999999864 399999999999999999999999999986544
Q ss_pred C----CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHH
Q 018381 75 G----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 150 (357)
Q Consensus 75 ~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
. .+..||+.|+|||++.+..++.++|||||||++|||++|+.||.......+... ..... ....+..++++
T Consensus 167 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~----i~~~~-~~~~~~~~s~~ 241 (269)
T d2java1 167 DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK----IREGK-FRRIPYRYSDE 241 (269)
T ss_dssp ---------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHHTC-CCCCCTTSCHH
T ss_pred CCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHH----HHcCC-CCCCCcccCHH
Confidence 3 346789999999999999999999999999999999999999876433222111 11111 12345567789
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.+||.+||+.||++|||+.++++|
T Consensus 242 l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 242 LNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHcCCChhHCcCHHHHHhC
Confidence 9999999999999999999999886
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-40 Score=287.83 Aligned_cols=176 Identities=20% Similarity=0.275 Sum_probs=140.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++.+++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 91 ~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~ 168 (283)
T d1mqba_ 91 MENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY 168 (283)
T ss_dssp CTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC------------
T ss_pred cccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhccccc-cccCccccceEEECCCCeEEEcccchhhcccCCCccce
Confidence 568889888843 5578999999999999999999999999 9999999999999999999999999998654321
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...||+.|+|||++.++.++.++|||||||++|||++|..|+...... ..+...+....+.+.+..++..+.+
T Consensus 169 ~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~l~~ 244 (283)
T d1mqba_ 169 TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEVMKAINDGFRLPTPMDCPSAIYQ 244 (283)
T ss_dssp -----CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHHHTTCCCCCCTTCBHHHHH
T ss_pred EeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH----HHHHHHHhccCCCCCchhhHHHHHH
Confidence 235789999999999999999999999999999999977666543211 1111222233344556678889999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
||.+||..||++|||+.+|++.|+.+.+.
T Consensus 245 li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 245 LMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp HHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 99999999999999999999999877653
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.3e-40 Score=291.30 Aligned_cols=168 Identities=18% Similarity=0.184 Sum_probs=139.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCcccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST 80 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~g 80 (357)
|+||+|..++. .++++++.++..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.........|
T Consensus 97 ~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G 173 (309)
T d1u5ra_ 97 CLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 173 (309)
T ss_dssp CSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred cCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEECCCCCEEEeecccccccCCCCcccc
Confidence 57888887764 4678999999999999999999999999 99999999999999999999999999998887788899
Q ss_pred CCCCCCcccccc---CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 81 NLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 81 t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
|+.|+|||++.+ +.++.++|||||||++|||++|+.||......... ............+..+++.+.+||.+
T Consensus 174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~s~~~~~li~~ 249 (309)
T d1u5ra_ 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL----YHIAQNESPALQSGHWSEYFRNFVDS 249 (309)
T ss_dssp CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----HHHHHSCCCCCSCTTSCHHHHHHHHH
T ss_pred CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhCCCCCCCCCCCCHHHHHHHHH
Confidence 999999999864 46889999999999999999999998754222111 11111111112234567889999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 018381 158 CLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rps~~~v~~~ 175 (357)
||+.||++|||+.++++|
T Consensus 250 ~L~~dP~~Rpt~~ell~H 267 (309)
T d1u5ra_ 250 CLQKIPQDRPTSEVLLKH 267 (309)
T ss_dssp HTCSSGGGSCCHHHHTTC
T ss_pred HCcCChhHCcCHHHHHhC
Confidence 999999999999999886
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-39 Score=282.43 Aligned_cols=169 Identities=18% Similarity=0.229 Sum_probs=135.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCeeeC-CCCCeEEecCCcccccCCC--C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG--K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~--~ 76 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+++ +|+||||||+|||++ .++.+||+|||+++..... .
T Consensus 94 ~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~ 171 (270)
T d1t4ha_ 94 MTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 171 (270)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred CCCCcHHHHHh--ccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccC
Confidence 58999999995 4568999999999999999999999976 499999999999996 5789999999999865443 3
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+..||+.|+|||++.+ +++.++|||||||++|||++|+.||........... ..........++...++++.+||.
T Consensus 172 ~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~li~ 247 (270)
T d1t4ha_ 172 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR---RVTSGVKPASFDKVAIPEVKEIIE 247 (270)
T ss_dssp ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH---HHTTTCCCGGGGGCCCHHHHHHHH
T ss_pred CcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHH---HHHcCCCCcccCccCCHHHHHHHH
Confidence 5689999999999874 699999999999999999999999864321110000 111111111233445678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 018381 157 RCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~v~~~ 175 (357)
+||+.||++|||+.++++|
T Consensus 248 ~~l~~dp~~R~s~~ell~H 266 (270)
T d1t4ha_ 248 GCIRQNKDERYSIKDLLNH 266 (270)
T ss_dssp HHSCSSGGGSCCHHHHHTS
T ss_pred HHccCCHhHCcCHHHHhCC
Confidence 9999999999999999986
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.3e-39 Score=286.52 Aligned_cols=170 Identities=16% Similarity=0.192 Sum_probs=130.5
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC---CCCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---QDGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~-- 75 (357)
++||||.++|. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||+. .++.+||+|||+++.....
T Consensus 89 ~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~ 165 (307)
T d1a06a_ 89 VSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 165 (307)
T ss_dssp CCSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCC-----------
T ss_pred cCCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhce-eeeEEecccceeecccCCCceEEEeccceeEEccCCCe
Confidence 57999999995 4678999999999999999999999999 99999999999995 5789999999999866543
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
.+..||+.|+|||++.+..++.++|||||||++|||++|+.||.............. ....+..+....+++++.+|
T Consensus 166 ~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~~~~l 243 (307)
T d1a06a_ 166 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK--AEYEFDSPYWDDISDSAKDF 243 (307)
T ss_dssp -------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHT--TCCCCCTTTTTTSCHHHHHH
T ss_pred eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhc--cCCCCCCccccCCCHHHHHH
Confidence 345799999999999999999999999999999999999999876533222111111 11122223345677899999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
|.+||+.||++|||+.++++|
T Consensus 244 i~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 244 IRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp HHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHccCCHhHCcCHHHHhcC
Confidence 999999999999999999997
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-39 Score=285.78 Aligned_cols=169 Identities=16% Similarity=0.191 Sum_probs=137.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC----CC
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~ 76 (357)
++||+|.+++.+ .++++++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 91 ~~~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~~-ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~ 168 (288)
T d2jfla1 91 CAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD 168 (288)
T ss_dssp CTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHT
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEEeecChhheeECCCCCEEEEechhhhccCCCccccc
Confidence 579999999853 4568999999999999999999999999 99999999999999999999999999875432 23
Q ss_pred ccccCCCCCCccccc-----cCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccc-cccCCCCChhhHHH
Q 018381 77 SYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD-SCLEGHFSNDDGTE 150 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 150 (357)
+..||+.|+|||++. +..++.++|||||||++|||++|+.||......... ..... .......+..++++
T Consensus 169 ~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~s~~ 244 (288)
T d2jfla1 169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL----LKIAKSEPPTLAQPSRWSSN 244 (288)
T ss_dssp CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH----HHHHHSCCCCCSSGGGSCHH
T ss_pred ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHH----HHHHcCCCCCCCccccCCHH
Confidence 567999999999984 356789999999999999999999998654211111 11111 11112234567889
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 151 LVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 151 ~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+.+||.+||+.||++|||+.++++|
T Consensus 245 ~~~li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 245 FKDFLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999999886
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-39 Score=284.92 Aligned_cols=177 Identities=23% Similarity=0.286 Sum_probs=141.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++.......++|.+++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 93 ~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~-ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 171 (285)
T d1fmka3 93 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 171 (285)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred cCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh-eecccccceEEEECCCCcEEEcccchhhhccCCCceee
Confidence 57999999996555678999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
....||+.|+|||++.++.++.++|||||||++|||++|..|+........ +...+......+.+..+++++.++|
T Consensus 172 ~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~l~~li 247 (285)
T d1fmka3 172 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE----VLDQVERGYRMPCPPECPESLHDLM 247 (285)
T ss_dssp ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH----HHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred ccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHH----HHHHHHhcCCCCCCcccCHHHHHHH
Confidence 234688999999999999999999999999999999998777654321110 1111112223345667788999999
Q ss_pred HHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 156 SRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+||+.||++|||+.+|++.|+.....
T Consensus 248 ~~cl~~dP~~Rps~~~i~~~L~~~~~~ 274 (285)
T d1fmka3 248 CQCWRKEPEERPTFEYLQAFLEDYFTS 274 (285)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence 999999999999999999998876644
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-39 Score=289.24 Aligned_cols=172 Identities=20% Similarity=0.280 Sum_probs=134.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeecCCCCCeeeCCCCCeEEecCCcccccC--CCCc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR--DGKS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~--~~~~ 77 (357)
|+||+|.+++. ..+.+++.++..++.||+.||.|||++ + |+||||||+|||++.+|.+||+|||+|+... ...+
T Consensus 86 ~~gg~L~~~l~--~~~~l~~~~~~~~~~qil~aL~yLH~~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~ 162 (322)
T d1s9ja_ 86 MDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 162 (322)
T ss_dssp CTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC--
T ss_pred CCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEccccCHHHeeECCCCCEEEeeCCCccccCCCcccc
Confidence 57999999995 456799999999999999999999985 7 9999999999999999999999999998543 2346
Q ss_pred cccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC---ccc----------------------
Q 018381 78 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK---NFL---------------------- 132 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~---~~~---------------------- 132 (357)
.+||+.|+|||++.+.+++.++||||+||++|||++|+.||.+......... ...
T Consensus 163 ~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (322)
T d1s9ja_ 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242 (322)
T ss_dssp -CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------------
T ss_pred ccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccccc
Confidence 7899999999999999999999999999999999999999865421111000 000
Q ss_pred ---------ccccc---ccCCCCC-hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 133 ---------MLMDS---CLEGHFS-NDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 133 ---------~~~~~---~~~~~~~-~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..... ......+ ...+.++.+||.+||+.||++|||+.++++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp ---CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 00000 0000011 1245789999999999999999999999986
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-38 Score=286.33 Aligned_cols=174 Identities=16% Similarity=0.154 Sum_probs=138.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC---CCCeEEecCCcccccCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~-- 75 (357)
|+||+|.++|..+....+++.++..|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 91 ~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~-iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~ 169 (335)
T d2ozaa1 91 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 169 (335)
T ss_dssp CCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCC
T ss_pred CCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC-CccccccccccccccccccccccccccceeeeccCCCc
Confidence 57999999996544568999999999999999999999999 999999999999985 557999999999865443
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccc--cCCCCChhhHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC--LEGHFSNDDGTELV 152 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 152 (357)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||.+.................. +.......+++++.
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 249 (335)
T d2ozaa1 170 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 249 (335)
T ss_dssp CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHH
T ss_pred cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHH
Confidence 355799999999999998999999999999999999999999865421111111011111111 11111235678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 018381 153 RLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
+||.+||+.||++|||+.++++|
T Consensus 250 ~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 250 MLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHccCChhHCcCHHHHHcC
Confidence 99999999999999999999987
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-39 Score=284.76 Aligned_cols=166 Identities=19% Similarity=0.233 Sum_probs=137.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+.+++.++..++.|++.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 90 ~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~ 166 (288)
T d1uu3a_ 90 AKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 166 (288)
T ss_dssp CTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred cCCCCHHHhhh--ccCCCCHHHHHHHHHHHHHHHHhhcccc-EEcCcCCccccccCCCceEEecccccceecccCCcccc
Confidence 57999999985 4578999999999999999999999999 999999999999999999999999999865432
Q ss_pred -CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
.+..||+.|+|||++.+..++.++|||||||++|||++|+.||........... .... ...++..+++++.+|
T Consensus 167 ~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~l 240 (288)
T d1uu3a_ 167 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKL--EYDFPEKFFPKARDL 240 (288)
T ss_dssp ---CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHTT--CCCCCTTCCHHHHHH
T ss_pred cccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHH----HHcC--CCCCCccCCHHHHHH
Confidence 245799999999999999999999999999999999999999876432221111 1111 113455677889999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 018381 155 ASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~ 175 (357)
|.+||+.||++|||+.+++.+
T Consensus 241 i~~~L~~dP~~R~t~~e~~~~ 261 (288)
T d1uu3a_ 241 VEKLLVLDATKRLGCEEMEGY 261 (288)
T ss_dssp HHTTSCSSGGGSTTSGGGTCH
T ss_pred HHHHccCCHhHCcCHHHHcCC
Confidence 999999999999999987543
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-39 Score=287.01 Aligned_cols=174 Identities=13% Similarity=0.209 Sum_probs=143.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++.+++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++......
T Consensus 92 ~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~ 169 (317)
T d1xkka_ 92 MPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 169 (317)
T ss_dssp CTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC---
T ss_pred ccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcC-cccCcchhhcceeCCCCCeEeeccccceeccccccccc
Confidence 478999998853 5678999999999999999999999999 9999999999999999999999999998654322
Q ss_pred --ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 77 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
...||+.|+|||++.++.++.++|||||||++|||+| |..||....... +...+....+.+.+..+++.+.+
T Consensus 170 ~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~-----~~~~i~~~~~~~~p~~~~~~~~~ 244 (317)
T d1xkka_ 170 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEKGERLPQPPICTIDVYM 244 (317)
T ss_dssp -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG-----HHHHHHHTCCCCCCTTBCHHHHH
T ss_pred ccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH-----HHHHHHcCCCCCCCcccCHHHHH
Confidence 2357999999999999999999999999999999998 666655432111 12222223334456678899999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 154 LASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
||.+||+.||++|||+.+|+.+|..+..
T Consensus 245 li~~cl~~dP~~RPs~~eil~~l~~~~~ 272 (317)
T d1xkka_ 245 IMVKCWMIDADSRPKFRELIIEFSKMAR 272 (317)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999887654
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-38 Score=283.69 Aligned_cols=166 Identities=19% Similarity=0.285 Sum_probs=140.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
|+||+|.+++. ..+.+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... .
T Consensus 87 ~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~ 163 (337)
T d1o6la_ 87 ANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 163 (337)
T ss_dssp CTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBC
T ss_pred cCCCchhhhhh--cccCCcHHHHHHHHHHHhhhhhhhhhcC-ccccccCHHHeEecCCCCEEEeecccccccccCCcccc
Confidence 68999999995 4678999999999999999999999999 999999999999999999999999999865432 3
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
+.+||+.|+|||++.+..++.++|+|||||++|||++|+.||.......+.... ... ...+|..+++++.+||.
T Consensus 164 ~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i----~~~--~~~~p~~~s~~~~dli~ 237 (337)
T d1o6la_ 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI----LME--EIRFPRTLSPEAKSLLA 237 (337)
T ss_dssp CCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHC--CCCCCTTSCHHHHHHHH
T ss_pred cceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHH----hcC--CCCCCccCCHHHHHHHH
Confidence 467999999999999999999999999999999999999998775433322111 111 12345667888999999
Q ss_pred HhccCCCCCCCC-----HHHHHHH
Q 018381 157 RCLQYEPRERPN-----AKSLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps-----~~~v~~~ 175 (357)
+||+.||.+|++ +.++++|
T Consensus 238 ~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 238 GLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred hhccCCchhhcccccccHHHHHcC
Confidence 999999999994 8889886
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-39 Score=276.63 Aligned_cols=171 Identities=21% Similarity=0.286 Sum_probs=142.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..+++++.||++||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~-iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 158 (258)
T d1k2pa_ 81 MANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 158 (258)
T ss_dssp CTTEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCC
T ss_pred cCCCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhcC-cccccccceeEEEcCCCcEEECcchhheeccCCCceee
Confidence 578999999843 5678999999999999999999999999 9999999999999999999999999997544322
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
...||+.|+|||++.+..++.++|||||||++|||+| |+.||.......+. ..+....+...|..+++.+.+|
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~-----~~i~~~~~~~~p~~~~~~l~~l 233 (258)
T d1k2pa_ 159 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA-----EHIAQGLRLYRPHLASEKVYTI 233 (258)
T ss_dssp CCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH-----HHHHTTCCCCCCTTCCHHHHHH
T ss_pred cccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHH-----HHHHhCCCCCCcccccHHHHHH
Confidence 3467899999999999999999999999999999998 78777654333222 1112223334566778899999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTP 178 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~ 178 (357)
|.+||+.||++|||+.+++++|..
T Consensus 234 i~~cl~~dP~~RPt~~eil~~L~d 257 (258)
T d1k2pa_ 234 MYSCWHEKADERPTFKILLSNILD 257 (258)
T ss_dssp HHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred HHHHccCCHhHCcCHHHHHHHhhC
Confidence 999999999999999999999854
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-39 Score=279.51 Aligned_cols=175 Identities=21% Similarity=0.323 Sum_probs=139.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
+++|+|.++|..+....+++..+++++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~ 161 (262)
T d1byga_ 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 161 (262)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc-eeccccchHhheecCCCCEeecccccceecCCCCcccc
Confidence 57999999996444456999999999999999999999999 999999999999999999999999999865443 3456
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
+|+.|+|||++.++.++.++|||||||++|||+| |+.|+...... .+...+....+.+++..+++++.+||.+|
T Consensus 162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~li~~c 236 (262)
T d1byga_ 162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVEKGYKMDAPDGCPPAVYEVMKNC 236 (262)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHHHHTTTCCCCCCTTCCHHHHHHHHHH
T ss_pred ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH-----HHHHHHHcCCCCCCCccCCHHHHHHHHHH
Confidence 7899999999999999999999999999999998 56555432211 11222222334456667788999999999
Q ss_pred ccCCCCCCCCHHHHHHHhCcccc
Q 018381 159 LQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
|..||++|||+.+++++|+.++.
T Consensus 237 l~~dP~~Rps~~~l~~~L~~i~~ 259 (262)
T d1byga_ 237 WHLDAAMRPSFLQLREQLEHIKT 259 (262)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccCHhHCcCHHHHHHHHHHHHh
Confidence 99999999999999999988754
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=2.8e-38 Score=285.27 Aligned_cols=171 Identities=18% Similarity=0.129 Sum_probs=139.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC--CCCCeEEecCCcccccCCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDGNPRLSCFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~--~~~~~kl~Dfg~~~~~~~~~-- 76 (357)
|+||+|.+++.+ ..+.+++.++..++.||+.||.|||+++ ||||||||+|||++ .++.+||+|||+++......
T Consensus 105 ~~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 182 (350)
T d1koaa2 105 MSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 182 (350)
T ss_dssp CCSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCE
T ss_pred CCCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CeeeeechhHeeeccCCCCeEEEeecchheeccccccc
Confidence 689999999943 4567999999999999999999999999 99999999999996 46789999999998765443
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
+..||+.|+|||++.+..++.++|||||||++|+|++|+.||.+......-... ......+.......+++++.+||
T Consensus 183 ~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~s~~~~~li 260 (350)
T d1koaa2 183 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV--KSCDWNMDDSAFSGISEDGKDFI 260 (350)
T ss_dssp EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHTCCCSCCGGGGGCCHHHHHHH
T ss_pred ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHH--HhCCCCCCcccccCCCHHHHHHH
Confidence 467999999999999999999999999999999999999998764322211110 00011111122345678899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 018381 156 SRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+||+.||++|||+.++++|
T Consensus 261 ~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 261 RKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp HHHCCSSGGGSCCHHHHHHS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999997
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-39 Score=281.56 Aligned_cols=174 Identities=21% Similarity=0.288 Sum_probs=135.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+++|+|.+++.. ..+.+++.+++.++.||++||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~ 166 (273)
T d1mp8a_ 89 CTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 166 (273)
T ss_dssp CTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC---------------
T ss_pred ccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccC-eeccccchhheeecCCCcEEEccchhheeccCCcceec
Confidence 578999998743 5678999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (357)
....||+.|+|||++.++.++.++|||||||++|||++ |..||.......+ ...+......+.+..+++.+.+|
T Consensus 167 ~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~l 241 (273)
T d1mp8a_ 167 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-----IGRIENGERLPMPPNCPPTLYSL 241 (273)
T ss_dssp ----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-----HHHHHTTCCCCCCTTCCHHHHHH
T ss_pred cceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHHHH
Confidence 23457899999999999999999999999999999998 7777654322211 11111222234566788999999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 155 ASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
|.+||..||++|||+.+|+++|+.+.+
T Consensus 242 i~~cl~~dp~~Rps~~ei~~~L~~i~~ 268 (273)
T d1mp8a_ 242 MTKCWAYDPSRRPRFTELKAQLSTILE 268 (273)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999987654
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=3.7e-38 Score=284.66 Aligned_cols=171 Identities=16% Similarity=0.137 Sum_probs=140.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeC--CCCCeEEecCCcccccCCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDGNPRLSCFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~--~~~~~kl~Dfg~~~~~~~~~-- 76 (357)
++||+|.+++. ..+.++++.+++.|+.||+.||.|||+++ ||||||||+||||+ .++.+||+|||+++......
T Consensus 108 ~~gg~L~~~~~-~~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~ 185 (352)
T d1koba_ 108 LSGGELFDRIA-AEDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 185 (352)
T ss_dssp CCCCBHHHHTT-CTTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCChHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence 58999999884 34567999999999999999999999999 99999999999998 57899999999998766543
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 155 (357)
+..||+.|+|||++.+..++.++|||||||++|+|+||+.||.+......... .......+.......+++++.+||
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~--i~~~~~~~~~~~~~~~s~~~~~li 263 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQN--VKRCDWEFDEDAFSSVSPEAKDFI 263 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH--HHHCCCCCCSSTTTTSCHHHHHHH
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHhCCCCCCcccccCCCHHHHHHH
Confidence 45789999999999999999999999999999999999999876432221111 011111222233456778999999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 018381 156 SRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+||+.||.+|||+.++++|
T Consensus 264 ~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 264 KNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp HTTSCSSGGGSCCHHHHHTS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999987
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.6e-38 Score=282.12 Aligned_cols=174 Identities=21% Similarity=0.251 Sum_probs=139.6
Q ss_pred CCCCchhhhhccC----------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC
Q 018381 1 MPNETLSKHLFHW----------------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 58 (357)
Q Consensus 1 ~~~gsL~~~l~~~----------------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~ 58 (357)
+++|+|.+++... ....+++.+++.|+.||+.||.|||+++ +|||||||+|||++.+
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~-ivHrDlKp~NILld~~ 176 (301)
T d1lufa_ 98 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGEN 176 (301)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGG
T ss_pred cCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC-eEeeEEcccceEECCC
Confidence 5789999998532 1235899999999999999999999999 9999999999999999
Q ss_pred CCeEEecCCcccccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCC-CCcchhHhhhcCcc
Q 018381 59 GNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI-PPSHALDLIRGKNF 131 (357)
Q Consensus 59 ~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~-~~~~~~~~~~~~~~ 131 (357)
+.+||+|||+++..... .+..||+.|+|||++.+..++.++|||||||++|||++|..| +.........
T Consensus 177 ~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~---- 252 (301)
T d1lufa_ 177 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI---- 252 (301)
T ss_dssp GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH----
T ss_pred CcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHH----
Confidence 99999999999744321 244678999999999999999999999999999999999754 4433221111
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 132 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
..+........+..+++++.+||.+||+.+|++||||.+|++.|+++.
T Consensus 253 -~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 253 -YYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp -HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred -HHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 111111223456677889999999999999999999999999998764
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-38 Score=278.60 Aligned_cols=176 Identities=18% Similarity=0.236 Sum_probs=144.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++. .....+++..++.++.|++.||.|||+.+ |+||||||+||||++++.+||+|||+++......
T Consensus 111 ~~~g~l~~~~~-~~~~~~~~~~~~~i~~qia~gL~~lH~~~-iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~ 188 (311)
T d1r0pa_ 111 MKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 188 (311)
T ss_dssp CTTCBHHHHHH-CTTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT
T ss_pred eecCchhhhhc-cccccchHHHHHHHHHHHHHhhhhhcccC-cccCCccHHhEeECCCCCEEEecccchhhccccccccc
Confidence 57899999985 35667899999999999999999999999 9999999999999999999999999998654321
Q ss_pred ----ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 ----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...||+.|+|||++.++.++.++||||||+++|||+||+.||...... ..+...+....+...+..+++.+.
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~----~~~~~~i~~g~~~~~p~~~~~~l~ 264 (311)
T d1r0pa_ 189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FDITVYLLQGRRLLQPEYCPDPLY 264 (311)
T ss_dssp TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHHHTTCCCCCCTTCCHHHH
T ss_pred eecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH----HHHHHHHHcCCCCCCcccCcHHHH
Confidence 245789999999999999999999999999999999988887654211 111111111223334566788999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
+||.+||+.||++|||+.+|+++|+.+...
T Consensus 265 ~li~~cl~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 265 EVMLKCWHPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 999999999999999999999999988765
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.3e-38 Score=282.72 Aligned_cols=166 Identities=17% Similarity=0.198 Sum_probs=140.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
++||+|.+++. ..+.+++.++..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... .+..
T Consensus 123 ~~~g~l~~~l~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~ 199 (350)
T d1rdqe_ 123 VAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC 199 (350)
T ss_dssp CTTCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCE
T ss_pred ccccchhhhHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCcCCHHHcccCCCCCEEeeeceeeeeccccccccc
Confidence 57899999995 4568999999999999999999999999 999999999999999999999999999876543 4568
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
||+.|||||++.+..++.++|||||||++|||+||+.||.+......... .... ...++..+++++.++|.+||
T Consensus 200 Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~li~~~L 273 (350)
T d1rdqe_ 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSG--KVRFPSHFSSDLKDLLRNLL 273 (350)
T ss_dssp ECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTCCHHHHHHHHHHS
T ss_pred CccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHH----HhcC--CCCCCccCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999876532221111 1111 11235567789999999999
Q ss_pred cCCCCCCC-----CHHHHHHH
Q 018381 160 QYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 160 ~~~p~~Rp-----s~~~v~~~ 175 (357)
..||.+|+ |+.++++|
T Consensus 274 ~~dP~kR~~~~r~t~~ell~H 294 (350)
T d1rdqe_ 274 QVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp CSCTTTCTTSSTTTTHHHHTS
T ss_pred hhCHHhccccccccHHHHHcC
Confidence 99999994 89999986
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=8e-38 Score=283.95 Aligned_cols=169 Identities=21% Similarity=0.220 Sum_probs=138.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC--Ccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~ 78 (357)
++||+|.++|. ....+++.++..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... ...
T Consensus 89 ~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~ylH~~~-iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~~ 165 (364)
T d1omwa3 89 MNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 165 (364)
T ss_dssp CCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCCSC
T ss_pred cCCCcHHHHHH--hcccccHHHHHHHHHHHHHHHHHHHHCC-ccceeeccceeEEcCCCcEEEeeeceeeecCCCccccc
Confidence 58999999995 4578999999999999999999999999 999999999999999999999999999866543 356
Q ss_pred ccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHH
Q 018381 79 STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 157 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 157 (357)
.||+.|+|||++.+ ..++.++|||||||++|||+||+.||.......... +... .......++..+++++.+||.+
T Consensus 166 ~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~--~~~~-~~~~~~~~~~~~s~~~~~li~~ 242 (364)
T d1omwa3 166 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRM-TLTMAVELPDSFSPELRSLLEG 242 (364)
T ss_dssp CSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH--HHHH-SSSCCCCCCSSSCHHHHHHHHH
T ss_pred ccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHh-cccCCCCCCCCCCHHHHHHHHH
Confidence 79999999999975 568999999999999999999999987532111000 0000 0111223455677899999999
Q ss_pred hccCCCCCCCC-----HHHHHHH
Q 018381 158 CLQYEPRERPN-----AKSLVAS 175 (357)
Q Consensus 158 cl~~~p~~Rps-----~~~v~~~ 175 (357)
||+.||++||| ++++++|
T Consensus 243 ~L~~dP~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 243 LLQRDVNRRLGCLGRGAQEVKES 265 (364)
T ss_dssp HTCSSTTTSTTTSSSTHHHHHTS
T ss_pred HcccCHHHhCCCcccCHHHHHcC
Confidence 99999999999 6899886
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.9e-37 Score=276.22 Aligned_cols=166 Identities=22% Similarity=0.264 Sum_probs=140.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-Cccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 79 (357)
++||+|..++. .+..+++.++..++.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+++..... .+..
T Consensus 86 ~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 162 (316)
T d1fota_ 86 IEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLC 162 (316)
T ss_dssp CCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCC
T ss_pred cCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccCc-EEccccCchheeEcCCCCEEEecCccceEecccccccc
Confidence 57999999985 5678899999999999999999999999 999999999999999999999999999876544 4568
Q ss_pred cCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHhc
Q 018381 80 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 159 (357)
||+.|+|||++.+..++.++|||||||++|+|++|+.||........... .... ...++...++++.++|.+||
T Consensus 163 Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~li~~~L 236 (316)
T d1fota_ 163 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEK----ILNA--ELRFPPFFNEDVKDLLSRLI 236 (316)
T ss_dssp SCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHHC--CCCCCTTSCHHHHHHHHHHT
T ss_pred CcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHH----HHcC--CCCCCCCCCHHHHHHHHHHh
Confidence 99999999999998999999999999999999999999876532222111 1111 12345567788999999999
Q ss_pred cCCCCCCC-----CHHHHHHH
Q 018381 160 QYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 160 ~~~p~~Rp-----s~~~v~~~ 175 (357)
..||.+|+ |++++++|
T Consensus 237 ~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 237 TRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp CSCTTTCTTSSTTTTHHHHTS
T ss_pred hhCHHhccccchhhHHHHHcC
Confidence 99999996 89999986
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-37 Score=277.80 Aligned_cols=176 Identities=20% Similarity=0.226 Sum_probs=143.6
Q ss_pred CCCCchhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHW--------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
++||+|.++|... ....+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+||
T Consensus 93 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~-iiHrDlkp~NIL~~~~~~~kl~Df 171 (309)
T d1fvra_ 93 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADF 171 (309)
T ss_dssp CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCT
T ss_pred cCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC-ccccccccceEEEcCCCceEEccc
Confidence 5899999999642 2468999999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCC---CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCC-CCcchhHhhhcCccccccccccCCC
Q 018381 67 GLMKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI-PPSHALDLIRGKNFLMLMDSCLEGH 142 (357)
Q Consensus 67 g~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
|+++..... ....||+.|+|||.+.++.++.++|||||||++|||++|..| |.......+ ...+....+.+
T Consensus 172 G~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~-----~~~i~~~~~~~ 246 (309)
T d1fvra_ 172 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-----YEKLPQGYRLE 246 (309)
T ss_dssp TCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-----HHHGGGTCCCC
T ss_pred cccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHH-----HHHHHhcCCCC
Confidence 999855432 344689999999999999999999999999999999998765 433222211 11112223344
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 143 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+..+++++.+||.+||+.||++|||+.+|+++|+.+...
T Consensus 247 ~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 286 (309)
T d1fvra_ 247 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 286 (309)
T ss_dssp CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 5667889999999999999999999999999999888754
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-38 Score=276.93 Aligned_cols=175 Identities=22% Similarity=0.317 Sum_probs=144.3
Q ss_pred CCCCchhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecC
Q 018381 1 MPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 66 (357)
+++|+|.++|..+. ...+++.+++.++.||+.||.|||+.+ ||||||||+|||++.++.+||+||
T Consensus 101 ~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~-ivHrDiKp~NiLl~~~~~~kl~df 179 (299)
T d1fgka_ 101 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADF 179 (299)
T ss_dssp CTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECST
T ss_pred cCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC-EEeeeecccceeecCCCCeEeccc
Confidence 57999999996432 246999999999999999999999999 999999999999999999999999
Q ss_pred CcccccCCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCcccccccccc
Q 018381 67 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 139 (357)
Q Consensus 67 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++..... ....+|+.|+|||++.++.++.++|||||||++|||++ |..||........ ...+....
T Consensus 180 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~-----~~~i~~~~ 254 (299)
T d1fgka_ 180 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-----FKLLKEGH 254 (299)
T ss_dssp TCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-----HHHHHTTC
T ss_pred hhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHH-----HHHHHcCC
Confidence 998855432 23568899999999999999999999999999999998 5666654332221 12222233
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 140 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 140 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
....+..+++.+.+||.+||+.||++|||+.+|++.|+.+..
T Consensus 255 ~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 255 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 344566778899999999999999999999999999987754
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-38 Score=275.86 Aligned_cols=173 Identities=20% Similarity=0.245 Sum_probs=141.2
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ..+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 92 ~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~ 169 (273)
T d1u46a_ 92 APLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169 (273)
T ss_dssp CTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEE
T ss_pred ecCcchhhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhCC-EeeeeecHHHhccccccceeeccchhhhhcccCCCcce
Confidence 578999998853 4567999999999999999999999999 9999999999999999999999999998654432
Q ss_pred ---ccccCCCCCCccccccCCCCccccccchHHHHHHHHh-CCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHH
Q 018381 77 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
...||..|+|||++.+..++.++|||||||++|||+| |+.||......... ..+.......+.+..+++.+.
T Consensus 170 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~~l~ 245 (273)
T d1u46a_ 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL----HKIDKEGERLPRPEDCPQDIY 245 (273)
T ss_dssp C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH----HHHHTSCCCCCCCTTCCHHHH
T ss_pred ecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHH----HHHHhCCCCCCCcccccHHHH
Confidence 2346789999999999999999999999999999998 88887654333221 111122233344566788999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhCcc
Q 018381 153 RLASRCLQYEPRERPNAKSLVASLTPL 179 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~v~~~l~~~ 179 (357)
+||.+||..||++|||+.+|++.|...
T Consensus 246 ~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 246 NVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 999999999999999999999988654
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-37 Score=274.79 Aligned_cols=170 Identities=16% Similarity=0.169 Sum_probs=138.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC----CeEEecCCcccccCCC-
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~~~~~~~~- 75 (357)
|+||+|.++|. ..+.+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 95 ~~gg~L~~~i~--~~~~l~~~~~~~~~~qi~~al~yLH~~~-ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~ 171 (293)
T d1jksa_ 95 VAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 171 (293)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC
T ss_pred CCCccccchhc--cccccchhHHHHHHHHHHHHHHhhhhcc-eeecccccceEEEecCCCcccceEecchhhhhhcCCCc
Confidence 58999999995 4568999999999999999999999999 99999999999998776 4999999999866543
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
.+..||+.|+|||++.+..++.++|||||||++|||++|+.||.+.......... ......+....+..+++.+.+
T Consensus 172 ~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~s~~~~~ 249 (293)
T d1jksa_ 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV--SAVNYEFEDEYFSNTSALAKD 249 (293)
T ss_dssp BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HTTCCCCCHHHHTTSCHHHHH
T ss_pred cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHH--HhcCCCCCchhcCCCCHHHHH
Confidence 3457899999999999989999999999999999999999998764322211100 000111111122346678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
||.+||+.||++|||+.++++|
T Consensus 250 li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 250 FIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999987
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.7e-37 Score=272.29 Aligned_cols=175 Identities=19% Similarity=0.261 Sum_probs=136.6
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+++++.+++.++.||+.||.|||+++ ||||||||+|||++.++..+|+|||.++.....
T Consensus 93 ~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~ 169 (277)
T d1o6ya_ 93 VDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 169 (277)
T ss_dssp CCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTSCEEECCCTTCEECC-------
T ss_pred CCCCEehhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCccccCcccccCccccceeehhhhhhhhcccccccc
Confidence 57899999985 4578999999999999999999999999 999999999999999999999999998744322
Q ss_pred --CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
.+..||+.|+|||++.+..++.++|||||||++|+|+||+.||............... ...........+++.+.+
T Consensus 170 ~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~~l~~ 247 (277)
T d1o6ya_ 170 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE--DPIPPSARHEGLSADLDA 247 (277)
T ss_dssp ---------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC--CCCCGGGTSSSCCHHHHH
T ss_pred ccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhc--CCCCCchhccCCCHHHHH
Confidence 2457899999999999989999999999999999999999998764322211111111 111111223456788999
Q ss_pred HHHHhccCCCCCCC-CHHHHHHHhCccc
Q 018381 154 LASRCLQYEPRERP-NAKSLVASLTPLQ 180 (357)
Q Consensus 154 li~~cl~~~p~~Rp-s~~~v~~~l~~~~ 180 (357)
+|.+||+.||++|| |++++++.|.+++
T Consensus 248 li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 248 VVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp HHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred HHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 99999999999998 8999999887764
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.6e-37 Score=269.36 Aligned_cols=170 Identities=20% Similarity=0.187 Sum_probs=138.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Cc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 77 (357)
|+||+|.++|. ..+++++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 92 ~~~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 168 (277)
T d1phka_ 92 MKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 168 (277)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCC
T ss_pred CCCchHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccccccceEEEcCCCCeEEccchheeEccCCCceee
Confidence 57999999995 4568999999999999999999999999 999999999999999999999999999866543 34
Q ss_pred cccCCCCCCcccccc------CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHH
Q 018381 78 YSTNLAFTPPEYLRT------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 151 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
..||+.|+|||.+.+ ..++.++||||+||++|+|++|+.||............... ......+....+++++
T Consensus 169 ~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~ 246 (277)
T d1phka_ 169 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG--NYQFGSPEWDDYSDTV 246 (277)
T ss_dssp CCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCCTTTGGGSCHHH
T ss_pred eeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhC--CCCCCCcccccCCHHH
Confidence 578999999999864 34688999999999999999999998765332211111100 1112222334678899
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 018381 152 VRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.+||.+||+.||++|||+.++++|
T Consensus 247 ~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 247 KDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHccCChhHCcCHHHHHcC
Confidence 999999999999999999999886
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-37 Score=275.65 Aligned_cols=166 Identities=20% Similarity=0.286 Sum_probs=139.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~ 76 (357)
|+||+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 85 ~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~~-iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~ 161 (320)
T d1xjda_ 85 LNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 161 (320)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred cCCCcHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCcccceeecCCCceeccccchhhhccccccccc
Confidence 58999999995 4678999999999999999999999999 999999999999999999999999999854432 3
Q ss_pred ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHH
Q 018381 77 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.+.....+.... ... ...++..+++++.+||.
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i----~~~--~~~~p~~~s~~~~dli~ 235 (320)
T d1xjda_ 162 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI----RMD--NPFYPRWLEKEAKDLLV 235 (320)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHC--CCCCCTTSCHHHHHHHH
T ss_pred ccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHH----HcC--CCCCCccCCHHHHHHHH
Confidence 457899999999999999999999999999999999999998765333221111 111 12345567788999999
Q ss_pred HhccCCCCCCCCHH-HHHHH
Q 018381 157 RCLQYEPRERPNAK-SLVAS 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~-~v~~~ 175 (357)
+||+.||++|||+. ++++|
T Consensus 236 ~~L~~dP~~R~s~~~~l~~h 255 (320)
T d1xjda_ 236 KLFVREPEKRLGVRGDIRQH 255 (320)
T ss_dssp HHSCSSGGGSBTTBSCGGGS
T ss_pred HhcccCCCCCcCHHHHHHhC
Confidence 99999999999995 78764
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-37 Score=271.70 Aligned_cols=178 Identities=15% Similarity=0.173 Sum_probs=135.7
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc--------CCCceeecCCCCCeeeCCCCCeEEecCCccccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS--------KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~--------~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 72 (357)
|++|+|.++|. ...++|.++++++.|++.||.|||+ ++ ||||||||+||||+.++.+||+|||+++..
T Consensus 83 ~~~g~L~~~l~---~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~-IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~ 158 (303)
T d1vjya_ 83 HEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred ccCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-eeccccCccceEEcCCCCeEEEecCccccc
Confidence 57999999994 4579999999999999999999997 46 999999999999999999999999999855
Q ss_pred CCC--------CccccCCCCCCccccccCC------CCccccccchHHHHHHHHhCCCCCCcchhHhhhcC-------c-
Q 018381 73 RDG--------KSYSTNLAFTPPEYLRTGR------VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-------N- 130 (357)
Q Consensus 73 ~~~--------~~~~gt~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~-------~- 130 (357)
... ....||+.|+|||++.+.. ++.++|||||||++|||+||..|+........... .
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~ 238 (303)
T d1vjya_ 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchH
Confidence 332 2356899999999987642 56789999999999999999876533210000000 0
Q ss_pred ---cccccccccCCCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 131 ---FLMLMDSCLEGHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 131 ---~~~~~~~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.........++.+ +...+..+.+|+.+||+.||++|||+.+|++.|+.+...
T Consensus 239 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 298 (303)
T d1vjya_ 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence 0001111111122 223566799999999999999999999999999887654
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-36 Score=267.25 Aligned_cols=172 Identities=19% Similarity=0.191 Sum_probs=134.6
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---Ccc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSY 78 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~ 78 (357)
++|++.... ......+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ...
T Consensus 98 ~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~-ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~~~ 175 (305)
T d1blxa_ 98 DQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 175 (305)
T ss_dssp SCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCC
T ss_pred cCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecCCCccEEEEcCCCCeeecchhhhhhhcccccCCCc
Confidence 455554333 346778999999999999999999999999 999999999999999999999999998755432 356
Q ss_pred ccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc-----------c------c-c---cccc
Q 018381 79 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------F------L-M---LMDS 137 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~-----------~------~-~---~~~~ 137 (357)
.||+.|+|||++.+.+++.++||||+||++|||++|+.||........-... + . . ....
T Consensus 176 ~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (305)
T d1blxa_ 176 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 255 (305)
T ss_dssp CCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCC
T ss_pred ccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccc
Confidence 7999999999999999999999999999999999999998754221110000 0 0 0 0000
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.....+....++.+.+||.+||+.||++|||+.++++|
T Consensus 256 ~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 256 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp CCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00112233467789999999999999999999999987
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-37 Score=271.80 Aligned_cols=178 Identities=18% Similarity=0.261 Sum_probs=143.4
Q ss_pred CCCCchhhhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEe
Q 018381 1 MPNETLSKHLFHWE----------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 64 (357)
Q Consensus 1 ~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~ 64 (357)
++||+|.+++.... ...+++.++..++.||++||.|||+++ +|||||||+||+++.++.+|++
T Consensus 109 ~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~-ivHrDLKp~NIl~~~~~~~ki~ 187 (311)
T d1t46a_ 109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKIC 187 (311)
T ss_dssp CTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTTEEEEC
T ss_pred CCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccccccccccccCccccc
Confidence 57999999986422 236999999999999999999999999 9999999999999999999999
Q ss_pred cCCcccccCCCC------ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccc
Q 018381 65 CFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC 138 (357)
Q Consensus 65 Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 138 (357)
|||+++...... ...||+.|+|||++.++.++.++|||||||++|||+|+..|+...... ...+...+...
T Consensus 188 DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~---~~~~~~~i~~~ 264 (311)
T d1t46a_ 188 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV---DSKFYKMIKEG 264 (311)
T ss_dssp CCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS---SHHHHHHHHHT
T ss_pred ccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCH---HHHHHHHHhcC
Confidence 999998655432 346789999999999999999999999999999999955554422100 01122233333
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 139 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 139 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
.+...+..+++.+.+||.+||+.||++|||+.+|++.|++....
T Consensus 265 ~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~ 308 (311)
T d1t46a_ 265 FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (311)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence 44445666788999999999999999999999999999875443
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-36 Score=268.67 Aligned_cols=175 Identities=18% Similarity=0.231 Sum_probs=140.9
Q ss_pred CCCCchhhhhccC--------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCccccc
Q 018381 1 MPNETLSKHLFHW--------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 72 (357)
+++|+|.+++... ....+++.++.+++.|+++||.|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 105 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~-ivHrDlk~~NiLld~~~~~Kl~DFGla~~~ 183 (308)
T d1p4oa_ 105 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 183 (308)
T ss_dssp CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred cCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeeceEcCCceeecCCceEEEeecccceec
Confidence 5799999998531 2245799999999999999999999999 999999999999999999999999999855
Q ss_pred CCC------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCC-CCcchhHhhhcCccccccccccCCCCCh
Q 018381 73 RDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI-PPSHALDLIRGKNFLMLMDSCLEGHFSN 145 (357)
Q Consensus 73 ~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
... ....||+.|+|||.+.++.++.++|||||||++|||+||..+ +......... ..+........+.
T Consensus 184 ~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~-----~~i~~~~~~~~p~ 258 (308)
T d1p4oa_ 184 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL-----RFVMEGGLLDKPD 258 (308)
T ss_dssp GGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHH-----HHHHTTCCCCCCT
T ss_pred cCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHhCCCCCCcc
Confidence 432 233578999999999999999999999999999999999654 4332211111 1111112233456
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCcccc
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 181 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~ 181 (357)
.+++.+.++|.+||+.+|++|||+.+|+++|++...
T Consensus 259 ~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 259 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 677899999999999999999999999999987644
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-36 Score=266.31 Aligned_cols=158 Identities=24% Similarity=0.407 Sum_probs=131.7
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-CCCeEEecCCcccccCCC--Cccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG--KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~--~~~~ 79 (357)
+++|.+++. .++.+++.++..++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++..... .+..
T Consensus 94 ~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~ 170 (273)
T d1xwsa_ 94 VQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 170 (273)
T ss_dssp EEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCC
T ss_pred cchHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CccccCcccceEEecCCCeEEECccccceecccccccccc
Confidence 367888884 4578999999999999999999999999 999999999999985 578999999999865443 4567
Q ss_pred cCCCCCCccccccCCC-CccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHHHHHHh
Q 018381 80 TNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 158 (357)
||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... ...... ..++..+++++.+||.+|
T Consensus 171 GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-~i~~~~-----------~~~~~~~s~~~~~li~~~ 238 (273)
T d1xwsa_ 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-EIIRGQ-----------VFFRQRVSSECQHLIRWC 238 (273)
T ss_dssp SCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-HHHHCC-----------CCCSSCCCHHHHHHHHHH
T ss_pred cCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-HHhhcc-----------cCCCCCCCHHHHHHHHHH
Confidence 9999999999987665 567899999999999999999887532 111111 123445678899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 018381 159 LQYEPRERPNAKSLVAS 175 (357)
Q Consensus 159 l~~~p~~Rps~~~v~~~ 175 (357)
|+.||++|||+.++++|
T Consensus 239 L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 239 LALRPSDRPTFEEIQNH 255 (273)
T ss_dssp TCSSGGGSCCHHHHHTS
T ss_pred ccCCHhHCcCHHHHhcC
Confidence 99999999999999986
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-36 Score=265.19 Aligned_cols=171 Identities=18% Similarity=0.156 Sum_probs=131.0
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Cc
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~ 77 (357)
+||++..++ ..+..+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .+
T Consensus 83 ~~~~~~~~~--~~~~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~ 159 (299)
T d1ua2a_ 83 ETDLEVIIK--DNSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTH 159 (299)
T ss_dssp SEEHHHHHT--TCCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCC
T ss_pred cchHHhhhh--hcccCCCHHHHHHHHHHHHHHHHHhhccc-eecccCCcceEEecCCCccccccCccccccCCCcccccc
Confidence 456666555 25678999999999999999999999999 999999999999999999999999999865432 34
Q ss_pred cccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhc-----------Ccccccc---ccc-c--
Q 018381 78 YSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-----------KNFLMLM---DSC-L-- 139 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-----------~~~~~~~---~~~-~-- 139 (357)
..||+.|+|||++.+. .++.++|||||||++|||++|..||........-. ..+.... ... .
T Consensus 160 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
T d1ua2a_ 160 QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS 239 (299)
T ss_dssp SCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCC
T ss_pred eecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhcc
Confidence 5789999999998754 57899999999999999999998886542211100 0000000 000 0
Q ss_pred CCC-----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 140 EGH-----FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 140 ~~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
... .....++++.+||.+||+.||++|||+.++++|
T Consensus 240 ~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 240 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp CCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 000 012346789999999999999999999999987
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-36 Score=268.90 Aligned_cols=169 Identities=17% Similarity=0.201 Sum_probs=136.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCC--CCeEEecCCcccccCCCC--
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD--GNPRLSCFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~--~~~kl~Dfg~~~~~~~~~-- 76 (357)
|+||+|.++|.. .+..+++.++..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++......
T Consensus 83 ~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~-iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~ 160 (321)
T d1tkia_ 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCcccccccceeecCCCceEEEEcccchhhccccCCcc
Confidence 578999999942 4457999999999999999999999999 9999999999999854 479999999998765543
Q ss_pred -ccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccccccccc--CCCCChhhHHHHHH
Q 018381 77 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL--EGHFSNDDGTELVR 153 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 153 (357)
+..+|+.|+|||.+.+..++.++|||||||++|+|++|..||........... ...... .......+++++.+
T Consensus 161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~s~~~~~ 236 (321)
T d1tkia_ 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN----IMNAEYTFDEEAFKEISIEAMD 236 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHHTCCCCCHHHHTTSCHHHHH
T ss_pred cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhCCCCCChhhccCCCHHHHH
Confidence 44689999999999998999999999999999999999999876533221111 111111 11111235678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 018381 154 LASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~v~~~ 175 (357)
||.+||+.||++|||+.++++|
T Consensus 237 li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 237 FVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999986
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-35 Score=263.63 Aligned_cols=171 Identities=17% Similarity=0.238 Sum_probs=132.3
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+.||+|.+++. .+.+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 92 ~~~g~L~~~l~---~~~l~~~~i~~i~~qil~al~yLH~~~-iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~ 167 (345)
T d1pmea_ 92 LMGADLYKLLK---TQHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 167 (345)
T ss_dssp CCCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCC
T ss_pred ecCCchhhhhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCcceEEECCCCCEEEcccCceeeccCCCccce
Confidence 46899999994 457999999999999999999999999 999999999999999999999999998754322
Q ss_pred --CccccCCCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccc--------------------
Q 018381 76 --KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL-------------------- 132 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-------------------- 132 (357)
....||+.|+|||++.. ..++.++||||+||++|+|++|+.||..............
T Consensus 168 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T d1pmea_ 168 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 247 (345)
T ss_dssp TTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHH
T ss_pred eeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhc
Confidence 34568999999999855 4568899999999999999999999875421110000000
Q ss_pred --cccccccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 133 --MLMDSCLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 133 --~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
......... ......++++.+||.+||+.||++|||+.++++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 248 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000000000 0112345679999999999999999999999987
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.3e-35 Score=261.59 Aligned_cols=176 Identities=14% Similarity=0.128 Sum_probs=135.4
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC---CCCeEEecCCcccccCCC---
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDG--- 75 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~--- 75 (357)
-+|+|.+.+. ..++.+++.++..++.|++.||.|||+++ ||||||||+|||++. +..+||+|||+++.....
T Consensus 85 ~~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~ 162 (299)
T d1ckia_ 85 LGPSLEDLFN-FCSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162 (299)
T ss_dssp CCCBHHHHHH-HTTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred cCCchhhhhh-hccCCCcHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence 3677777764 35678999999999999999999999999 999999999999863 457999999999865432
Q ss_pred --------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCcccccccccc---CCCCC
Q 018381 76 --------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL---EGHFS 144 (357)
Q Consensus 76 --------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 144 (357)
.+..||+.|+|||++.+..++.++|||||||++|||++|+.||........... ......... .....
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 241 (299)
T d1ckia_ 163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK-YERISEKKMSTPIEVLC 241 (299)
T ss_dssp CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC--------HHHHHHHHHHSCHHHHT
T ss_pred cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHH-HHHhhcccCCCChhHhc
Confidence 245799999999999998899999999999999999999999865422111100 000000000 01123
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccc
Q 018381 145 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 180 (357)
Q Consensus 145 ~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~ 180 (357)
..+++++.++|.+||..+|++||++.++.+.|+.+.
T Consensus 242 ~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~ 277 (299)
T d1ckia_ 242 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277 (299)
T ss_dssp TTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 356788999999999999999999999988877654
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.5e-35 Score=257.61 Aligned_cols=172 Identities=19% Similarity=0.250 Sum_probs=131.8
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
+|++.+++.......+++.++..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ...
T Consensus 84 ~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~-IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~ 162 (298)
T d1gz8a_ 84 HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162 (298)
T ss_dssp SEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCC
T ss_pred CCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC-EEccccCchheeecccCcceeccCCcceeccCCcccceee
Confidence 455666665556778999999999999999999999999 999999999999999999999999999755432 345
Q ss_pred ccCCCCCCccccccCC-CCccccccchHHHHHHHHhCCCCCCcchhHhhhc-------C-------ccccccc------c
Q 018381 79 STNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------K-------NFLMLMD------S 137 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-------~-------~~~~~~~------~ 137 (357)
.||+.|+|||++.... ++.++|+|||||++|+|++|+.||.+......-. . ....... .
T Consensus 163 ~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (298)
T d1gz8a_ 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242 (298)
T ss_dssp BCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCC
T ss_pred cccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccccccccc
Confidence 7899999999887755 4789999999999999999999987542111000 0 0000000 0
Q ss_pred ccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 138 CLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 138 ~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..... .....++++.+||.+||+.||++|||+.++++|
T Consensus 243 ~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 243 WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp CCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00000 012345789999999999999999999999997
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=8.4e-35 Score=256.86 Aligned_cols=179 Identities=12% Similarity=0.059 Sum_probs=139.1
Q ss_pred CCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCC-----CCCeEEecCCcccccCCC-
Q 018381 2 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-----DGNPRLSCFGLMKNSRDG- 75 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~-----~~~~kl~Dfg~~~~~~~~- 75 (357)
.+|+|.+++. ..+..+++.++..++.|++.||.|||+++ ||||||||+|||++. ++.+||+|||+++.....
T Consensus 83 ~~~~l~~~~~-~~~~~~~~~~~~~i~~q~~~~l~~lH~~g-iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (293)
T d1csna_ 83 LGPSLEDLLD-LCGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 160 (293)
T ss_dssp CCCBHHHHHH-HTTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred cCCCHHHHHH-hhccchhhHHHHHHHHHHHHHHHHHHHCC-ceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence 4789999885 35678999999999999999999999999 999999999999974 567999999999864321
Q ss_pred ----------CccccCCCCCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHh--hhcCccccccccccCCCC
Q 018381 76 ----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL--IRGKNFLMLMDSCLEGHF 143 (357)
Q Consensus 76 ----------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 143 (357)
.+..||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+............
T Consensus 161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (293)
T d1csna_ 161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL 240 (293)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH
T ss_pred cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHh
Confidence 24579999999999999999999999999999999999999986431110 000000000001111112
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhCccccc
Q 018381 144 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 182 (357)
Q Consensus 144 ~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~l~~~~~~ 182 (357)
...+|+++.+++..|+..+|++||+++.+.+.|+.+...
T Consensus 241 ~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~ 279 (293)
T d1csna_ 241 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279 (293)
T ss_dssp TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHH
Confidence 234667899999999999999999999998888776544
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=2.6e-34 Score=253.16 Aligned_cols=170 Identities=18% Similarity=0.247 Sum_probs=127.6
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC----Ccc
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 78 (357)
++.+..+. ...+.+++.++..++.||+.||.|||+.+ ||||||||+|||++.++.+||+|||++...... ...
T Consensus 84 ~~~~~~~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 160 (286)
T d1ob3a_ 84 QDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160 (286)
T ss_dssp EEHHHHHH--TSTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred hhhHHHHH--hhcCCcchhhhHHHHHHHHHHHHHhccCc-EEecCCCCceeeEcCCCCEEecccccceecccCcccccee
Confidence 34444444 35688999999999999999999999999 999999999999999999999999998765432 344
Q ss_pred ccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhh-hc----------Cc---cccc---------
Q 018381 79 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-RG----------KN---FLML--------- 134 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-~~----------~~---~~~~--------- 134 (357)
.+++.|+|||.+.+. .++.++|||||||++|||++|+.||........ .. .. ....
T Consensus 161 ~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
T d1ob3a_ 161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240 (286)
T ss_dssp -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred cccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccccc
Confidence 689999999998764 568999999999999999999999865421110 00 00 0000
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 135 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
.............++.+.+||.+||+.||++|||++|+++|
T Consensus 241 ~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000111233456789999999999999999999999976
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-34 Score=257.57 Aligned_cols=161 Identities=24% Similarity=0.252 Sum_probs=126.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-CeEEecCCcccccCCC---CccccCCCCCCccc
Q 018381 14 ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDG---KSYSTNLAFTPPEY 89 (357)
Q Consensus 14 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~ 89 (357)
....+++.++..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... .+..||+.|+|||.
T Consensus 115 ~~~~l~~~~~~~i~~qil~aL~yLH~~~-IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~ 193 (350)
T d1q5ka_ 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193 (350)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccccccChHH
Confidence 5678999999999999999999999999 99999999999999775 8999999999865433 35678999999998
Q ss_pred ccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhc-----------------------CccccccccccCCCCCh
Q 018381 90 LRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-----------------------KNFLMLMDSCLEGHFSN 145 (357)
Q Consensus 90 ~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~ 145 (357)
+.+ ..++.++||||+||++|||++|+.||........-. ..+.......+......
T Consensus 194 ~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (350)
T d1q5ka_ 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP 273 (350)
T ss_dssp HTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCT
T ss_pred hhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhccc
Confidence 875 468999999999999999999999886542111000 00000001111111233
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 146 DDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 146 ~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
..++++.+||.+||..||++|||+.++++|
T Consensus 274 ~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 303 (350)
T d1q5ka_ 274 RTPPEAIALCSRLLEYTPTARLTPLEACAH 303 (350)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 467789999999999999999999999986
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-34 Score=257.26 Aligned_cols=170 Identities=19% Similarity=0.255 Sum_probs=134.8
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 75 (357)
+.||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 111 ~~~~~L~~~i~--~~~~~~e~~~~~~~~Qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~ 187 (322)
T d1vzoa_ 111 INGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA 187 (322)
T ss_dssp CCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGG
T ss_pred ccccHHHHHHH--hcccccHHHHHHHHHHHHHHHHHhhcCC-EEeccCCccceeecCCCCEEEeeccchhhhcccccccc
Confidence 57899999995 4567889999999999999999999999 999999999999999999999999999755322
Q ss_pred CccccCCCCCCccccccC--CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccccccccccCCCCChhhHHHHHH
Q 018381 76 KSYSTNLAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 153 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
.+..|++.|++||.+.+. .++.++|||||||++|+|++|+.||................. .....++..+++++.+
T Consensus 188 ~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~ 265 (322)
T d1vzoa_ 188 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPPYPQEMSALAKD 265 (322)
T ss_dssp CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH--HCCCCCCTTSCHHHHH
T ss_pred cccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcc--cCCCCCcccCCHHHHH
Confidence 345789999999999764 467799999999999999999999865421111000001111 1122345567889999
Q ss_pred HHHHhccCCCCCCC-----CHHHHHHH
Q 018381 154 LASRCLQYEPRERP-----NAKSLVAS 175 (357)
Q Consensus 154 li~~cl~~~p~~Rp-----s~~~v~~~ 175 (357)
||.+||++||++|| |++++++|
T Consensus 266 li~~~l~~dP~~R~s~~~~t~~eil~H 292 (322)
T d1vzoa_ 266 LIQRLLMKDPKKRLGCGPRDADEIKEH 292 (322)
T ss_dssp HHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHHHHcccCHHHcCCCCcccHHHHHcC
Confidence 99999999999998 48899886
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-33 Score=254.66 Aligned_cols=168 Identities=15% Similarity=0.231 Sum_probs=131.5
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-CccccC
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~gt 81 (357)
+++|..++ ..+.+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+|++|||+++..... ....||
T Consensus 106 ~~~l~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~~-IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~~~~t 181 (346)
T d1cm8a_ 106 GTDLGKLM---KHEKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVT 181 (346)
T ss_dssp SEEHHHHH---HHCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSC
T ss_pred cccHHHHH---HhccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCcchhhcccccccccccccceeccCCcccccccc
Confidence 44666666 3567999999999999999999999999 999999999999999999999999999866543 456799
Q ss_pred CCCCCcccccc-CCCCccccccchHHHHHHHHhCCCCCCcchhHhh----------------hcCc----------cccc
Q 018381 82 LAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI----------------RGKN----------FLML 134 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~----------------~~~~----------~~~~ 134 (357)
+.|+|||++.+ ..++.++||||+||++|+|++|+.||........ .... ....
T Consensus 182 ~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (346)
T d1cm8a_ 182 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL 261 (346)
T ss_dssp GGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCC
T ss_pred ccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcc
Confidence 99999999876 4568899999999999999999998865421100 0000 0000
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 135 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
....+ .......++.+.+||.+||..||++|||+.++++|
T Consensus 262 ~~~~~-~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H 301 (346)
T d1cm8a_ 262 EKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301 (346)
T ss_dssp CCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccch-HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 11223456789999999999999999999999997
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-33 Score=250.90 Aligned_cols=170 Identities=15% Similarity=0.170 Sum_probs=127.1
Q ss_pred CCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC-------
Q 018381 3 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------- 75 (357)
+|++..+. .....+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 101 ~~~~~~~~--~~~~~~~~~~~~~i~~qil~~l~~lH~~~-ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~ 177 (318)
T d3blha1 101 HDLAGLLS--NVLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 177 (318)
T ss_dssp EEHHHHHT--CTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCC
T ss_pred CCccchhh--hcccccccHHHHHHHHHHHHHHHHhccCC-EEecCcCchheeecCCCcEEeeecceeeeccccccccccc
Confidence 34444333 35678999999999999999999999999 999999999999999999999999999754421
Q ss_pred -CccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcC----------c---------cccc
Q 018381 76 -KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK----------N---------FLML 134 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~----------~---------~~~~ 134 (357)
.+..||+.|+|||++.+. .++.++|||||||++|||++|+.||.+......... . ....
T Consensus 178 ~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 257 (318)
T d3blha1 178 YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEK 257 (318)
T ss_dssp CCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-----
T ss_pred ccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhh
Confidence 235689999999998764 678999999999999999999988865421111000 0 0000
Q ss_pred cccccCCCCCh-------hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 135 MDSCLEGHFSN-------DDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 135 ~~~~~~~~~~~-------~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
........... ..++.+.+||.+||+.||++|||+.++++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 258 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp --CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 00000000000 124567899999999999999999999998
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.98 E-value=6.3e-33 Score=249.02 Aligned_cols=169 Identities=18% Similarity=0.207 Sum_probs=129.9
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCC-CeEEecCCcccccCCC---C
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDG---K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~---~ 76 (357)
+++|+|..+. +.+++.++..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... .
T Consensus 114 ~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~g-IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~ 187 (328)
T d3bqca1 114 VNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 187 (328)
T ss_dssp CCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCC
T ss_pred cCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcc-cccccccccceEEcCCCCeeeecccccceeccCCCccc
Confidence 4678887654 46999999999999999999999999 99999999999998655 5899999999865543 4
Q ss_pred ccccCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHh------------------hhcC------cc
Q 018381 77 SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDL------------------IRGK------NF 131 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~------------------~~~~------~~ 131 (357)
...+|+.|+|||.+.+. .++.++||||+||++|+|++|+.||....... .... .+
T Consensus 188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 267 (328)
T d3bqca1 188 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 267 (328)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGG
T ss_pred ccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCccc
Confidence 55789999999998775 46899999999999999999999876431110 0000 00
Q ss_pred c--------cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 132 L--------MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 132 ~--------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
. ...............++++.+||.+||+.||++|||++++++|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H 319 (328)
T d3bqca1 268 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319 (328)
T ss_dssp GGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 0000111111223456789999999999999999999999986
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.4e-33 Score=253.87 Aligned_cols=171 Identities=16% Similarity=0.188 Sum_probs=130.0
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCC-CCccc
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-GKSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-~~~~~ 79 (357)
+.||+|.+++ ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.+|.+|++|||++..... ..+..
T Consensus 104 ~~gg~L~~~~---~~~~l~e~~~~~i~~qil~aL~~LH~~g-iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~~~ 179 (348)
T d2gfsa1 104 LMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 179 (348)
T ss_dssp CCSEEHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCC----CCTGGGSSSC
T ss_pred ecCCchhhhc---ccccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCCccccccccccccccccchhcccCccccccc
Confidence 4689999999 4567999999999999999999999999 99999999999999999999999999875543 34567
Q ss_pred cCCCCCCccccccC-CCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCccc----------------------cccc
Q 018381 80 TNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL----------------------MLMD 136 (357)
Q Consensus 80 gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~----------------------~~~~ 136 (357)
||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+............ ....
T Consensus 180 g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (348)
T d2gfsa1 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 259 (348)
T ss_dssp HHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSC
T ss_pred ccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcc
Confidence 89999999987765 458899999999999999999999875421111000000 0000
Q ss_pred cccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 137 SCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 137 ~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...... .....++.+.+||.+||..||.+|||+.++++|
T Consensus 260 ~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 260 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp CCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence 000000 012356789999999999999999999999986
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1e-32 Score=243.61 Aligned_cols=172 Identities=16% Similarity=0.169 Sum_probs=132.1
Q ss_pred CCCCchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCC----
Q 018381 1 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 76 (357)
+.|++|..++. ..+.+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||.++......
T Consensus 83 ~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~-IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~ 159 (292)
T d1unla_ 83 CDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS 159 (292)
T ss_dssp CSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCC
T ss_pred ccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcCC-EeeecccCcccccccCCceeeeecchhhcccCCCccce
Confidence 35677777764 5678999999999999999999999999 9999999999999999999999999998655432
Q ss_pred ccccCCCCCCccccccCC-CCccccccchHHHHHHHHhCCCCCCcchhHh--hhc------C----c---ccccc-----
Q 018381 77 SYSTNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALDL--IRG------K----N---FLMLM----- 135 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~--~~~------~----~---~~~~~----- 135 (357)
...+++.|+|||++.+.. ++.++|||||||++|||++|+.||....... +.. . . .....
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (292)
T d1unla_ 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred eeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccc
Confidence 345678899999987655 5889999999999999999999875431110 000 0 0 00000
Q ss_pred ----ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 136 ----DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 136 ----~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
............++.+.+||.+||+.||++|||++++++|
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0001111233456789999999999999999999999986
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.3e-31 Score=242.85 Aligned_cols=159 Identities=16% Similarity=0.206 Sum_probs=119.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCC---CccccCCCCCCcccccc
Q 018381 16 QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYSTNLAFTPPEYLRT 92 (357)
Q Consensus 16 ~~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~ 92 (357)
..+++.++..++.||+.||.|||++| |+||||||+|||++.++.+|++|||+++..... ....+|+.|+|||++.+
T Consensus 114 ~~~~~~~i~~~~~qil~gl~~LH~~g-iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~ 192 (355)
T d2b1pa1 114 MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192 (355)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC---------------CCTTCCHHHHTT
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhhcc-cccccCCccccccccccceeeechhhhhccccccccccccccccccChhhhcC
Confidence 46899999999999999999999999 999999999999999999999999998755543 34578999999999999
Q ss_pred CCCCccccccchHHHHHHHHhCCCCCCcchhHhhhcCc---------------------------------ccccccccc
Q 018381 93 GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN---------------------------------FLMLMDSCL 139 (357)
Q Consensus 93 ~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~ 139 (357)
..+++++||||+||++|+|++|+.||.+.......... .........
T Consensus 193 ~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (355)
T d2b1pa1 193 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL 272 (355)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGG
T ss_pred CCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccccccccccc
Confidence 99999999999999999999999888644211110000 000000000
Q ss_pred C---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 140 E---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 140 ~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
. .......++++.+||.+||..||++|||++++++|
T Consensus 273 ~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 273 FPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp SCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0 00122357789999999999999999999999988
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=6.3e-30 Score=232.46 Aligned_cols=163 Identities=19% Similarity=0.280 Sum_probs=125.8
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeecCCCCCeeeCCCCC------eEEecCCcccccCC-CCccccCCC
Q 018381 12 HWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGN------PRLSCFGLMKNSRD-GKSYSTNLA 83 (357)
Q Consensus 12 ~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~------~kl~Dfg~~~~~~~-~~~~~gt~~ 83 (357)
......+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++. +|++|||.+..... .....||+.
T Consensus 116 ~~~~~~~~~~~i~~i~~qil~al~~lh~~~~-IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~ 194 (362)
T d1q8ya_ 116 KYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 194 (362)
T ss_dssp HTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGG
T ss_pred cccccCCcHHHHHHHHHHHHHHHHHHhhhcC-cccccCChhHeeeeccCcccccceeeEeeccccccccccccccccccc
Confidence 3466789999999999999999999998 77 999999999999986553 89999999885543 345679999
Q ss_pred CCCccccccCCCCccccccchHHHHHHHHhCCCCCCcchhHh----------------------hhc----------Ccc
Q 018381 84 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL----------------------IRG----------KNF 131 (357)
Q Consensus 84 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~----------------------~~~----------~~~ 131 (357)
|+|||++.+..++.++|+||+||++++|++|+.||....... ... ...
T Consensus 195 y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 274 (362)
T d1q8ya_ 195 YRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGL 274 (362)
T ss_dssp GCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--C
T ss_pred ccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchh
Confidence 999999999999999999999999999999999875431100 000 000
Q ss_pred cccccc----------ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 018381 132 LMLMDS----------CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 175 (357)
Q Consensus 132 ~~~~~~----------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v~~~ 175 (357)
...... ..........++.+.+||.+||..||.+|||+.++++|
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 275 LRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp BSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred hhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000000 01122345678899999999999999999999999987
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=2e-21 Score=146.48 Aligned_cols=104 Identities=24% Similarity=0.384 Sum_probs=100.5
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
.+..++.+|+.++..|+|++|+.+|+++|+.+|. ++.+|+++|.+|.++|++++|+.+++++++++|+++.+|+++|.+
T Consensus 2 ~~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 80 (117)
T d1elwa_ 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 80 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+..+|++++|+.+|+++++++|++.
T Consensus 81 ~~~~~~~~~A~~~~~~a~~~~p~~~ 105 (117)
T d1elwa_ 81 LEFLNRFEEAKRTYEEGLKHEANNP 105 (117)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999863
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.83 E-value=9e-21 Score=156.48 Aligned_cols=104 Identities=21% Similarity=0.431 Sum_probs=100.6
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
.++.+++.|+.+++.|+|++|+..|++||+++|. ++.+|+++|.||.++|+|++|+.+|++||+++|+++.+|+++|.+
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~ 81 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3567899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|..+|+|++|+.+|++|++++|++.
T Consensus 82 ~~~l~~~~~A~~~~~~al~l~p~~~ 106 (201)
T d2c2la1 82 QLEMESYDEAIANLQRAYSLAKEQR 106 (201)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccH
Confidence 9999999999999999999999754
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=5.3e-20 Score=146.43 Aligned_cols=107 Identities=23% Similarity=0.380 Sum_probs=103.0
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
..+.+..++.+|+.+++.|+|++|+..|+++|+++|. +..+|+++|.|++.+|++++|+.++++||+++|+++.+|+++
T Consensus 6 ~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~ 84 (159)
T d1a17a_ 6 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHH
Confidence 3467888999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|.++..+|++++|+.+|+++++++|++.
T Consensus 85 g~~~~~~g~~~eA~~~~~~a~~~~p~~~ 112 (159)
T d1a17a_ 85 AASNMALGKFRAALRDYETVVKVKPHDK 112 (159)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 9999999999999999999999999863
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.79 E-value=3.4e-19 Score=140.66 Aligned_cols=110 Identities=19% Similarity=0.252 Sum_probs=100.7
Q ss_pred hHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc---------------hHHHhhHHHHHHhcCChHHHHHHH
Q 018381 246 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---------------PTVFARRCLCYLLSDMPQEALGDA 310 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~ 310 (357)
.+..+.+..++..|+.+|+.|+|.+|+..|++||+..+... ..+|.|+|.||+++|++++|+.++
T Consensus 11 ~e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~ 90 (153)
T d2fbna1 11 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHA 90 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhh
Confidence 35678889999999999999999999999999998665411 247899999999999999999999
Q ss_pred HHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 311 MQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 311 ~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
++||+++|+++++|+++|.+|..+|++++|+.+|+++++++|++.
T Consensus 91 ~~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 135 (153)
T d2fbna1 91 SKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL 135 (153)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred hccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999999999999999999999999864
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=1.1e-18 Score=140.21 Aligned_cols=109 Identities=12% Similarity=0.159 Sum_probs=100.8
Q ss_pred hHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc---------------hHHHhhHHHHHHhcCChHHHHHHH
Q 018381 246 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---------------PTVFARRCLCYLLSDMPQEALGDA 310 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~ 310 (357)
.+....+..++..|+.+|+.|+|++|+..|+++|+..|. . ..+|.|+|.||+++|+|++|+.++
T Consensus 7 ~ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~ 85 (170)
T d1p5qa1 7 EEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESC 85 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhh-ccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchh
Confidence 345677889999999999999999999999999988775 3 247889999999999999999999
Q ss_pred HHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 311 MQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 311 ~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
++||+++|+++.+|+++|.+|+.+|+|++|+.+|+++++++|++.
T Consensus 86 ~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~ 130 (170)
T d1p5qa1 86 NKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 130 (170)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH
T ss_pred hhhhhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999999999999999999999999863
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.76 E-value=2.2e-18 Score=138.17 Aligned_cols=110 Identities=14% Similarity=0.209 Sum_probs=99.7
Q ss_pred hHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCC--------------chHHHhhHHHHHHhcCChHHHHHHHH
Q 018381 246 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV--------------SPTVFARRCLCYLLSDMPQEALGDAM 311 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~a~~~~~~~~~~~A~~~~~ 311 (357)
.+....+..+++.|+.+|+.|+|.+|+..|++||...+.. ...+|.|+|.||+++|+|++|+.+++
T Consensus 9 ~E~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~ 88 (168)
T d1kt1a1 9 KEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCD 88 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhh
Confidence 3466788999999999999999999999999999644330 12468899999999999999999999
Q ss_pred HHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 312 QAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 312 ~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+++.++|++..+|+++|.++..+|+|++|+.+|+++++++|++.
T Consensus 89 ~al~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~ 132 (168)
T d1kt1a1 89 KALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 132 (168)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCH
T ss_pred hhhhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999999999999999999874
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.73 E-value=6.8e-18 Score=135.40 Aligned_cols=106 Identities=21% Similarity=0.282 Sum_probs=97.5
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhc----------------cCCCCchHHHhhHHHHHHhcCChHHHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFID----------------GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQ 312 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~----------------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 312 (357)
...+..++..|+.++..|+|++|+..|+++|+ ++|. ...+|.|+|.|+.++|+|++|+.+|++
T Consensus 24 ~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~Ai~~~~~ 102 (169)
T d1ihga1 24 LLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDSCLE 102 (169)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHHHHhhcccchhhhhhhh
Confidence 34456678899999999999999999999985 3555 677899999999999999999999999
Q ss_pred HHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 313 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 313 al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++.
T Consensus 103 al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~ 145 (169)
T d1ihga1 103 ALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDK 145 (169)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999864
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=5.8e-18 Score=129.27 Aligned_cols=102 Identities=17% Similarity=0.176 Sum_probs=95.2
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChH-------H
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT-------A 323 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-------a 323 (357)
.+..+++.|+.++..|+|++|+.+|+++|+++|. +..+++++|.||..+|+|++|+.++++||+++|+++. +
T Consensus 3 ~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~~ 81 (128)
T d1elra_ 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (128)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4667889999999999999999999999999999 9999999999999999999999999999999998864 6
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 324 FYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 324 ~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
|+++|.++..++++++|+.+|++++..+|+
T Consensus 82 ~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 111 (128)
T d1elra_ 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (128)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Confidence 777888999999999999999999988764
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.69 E-value=6.1e-17 Score=120.39 Aligned_cols=94 Identities=12% Similarity=0.041 Sum_probs=90.9
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 333 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 333 (357)
.....|..+++.|++++|+..|+++|+.+|+ ++.+|+++|.++..+|++++|+.++++|++++|+++.+|+.+|.+|..
T Consensus 18 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~y~~ 96 (112)
T d1hxia_ 18 NPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 96 (112)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHHHHH
Confidence 3467899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhh
Q 018381 334 LGMNNDAQETLKDGT 348 (357)
Q Consensus 334 lg~~~~A~~~~~~al 348 (357)
+|++++|++.|++.|
T Consensus 97 ~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 97 EHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 999999999999976
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=1.3e-16 Score=136.35 Aligned_cols=105 Identities=14% Similarity=0.002 Sum_probs=101.2
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHH
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 328 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 328 (357)
+..+..+...|..++..|++++|+..|+++|+++|+ ++.+|+++|.+|..+|++++|+..+++|++++|+++.+|+++|
T Consensus 34 ~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 112 (259)
T d1xnfa_ 34 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 112 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHH
Confidence 456778889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccc
Q 018381 329 AALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 329 ~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.++..+|++++|++.|+++++++|++
T Consensus 113 ~~~~~~g~~~~A~~~~~~al~~~p~~ 138 (259)
T d1xnfa_ 113 IALYYGGRDKLAQDDLLAFYQDDPND 138 (259)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHhhHHHHHHHHHHHHhhcccc
Confidence 99999999999999999999999974
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=2.3e-16 Score=128.95 Aligned_cols=100 Identities=13% Similarity=0.098 Sum_probs=91.4
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 330 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 330 (357)
++..+.++|..++..|+|++|++.|+++ .|. ++.+|+|+|.+|+.+|+|++|+.+|++||+++|+++.+|+++|.+
T Consensus 4 ~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~~ 79 (192)
T d1hh8a_ 4 EAISLWNEGVLAADKKDWKGALDAFSAV---QDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGML 79 (192)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 3445668899999999999999999874 455 788999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 018381 331 LFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 331 ~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+..+|+|++|+.+|++|++..|.+
T Consensus 80 ~~~~g~~~~A~~~~~kAl~~~~~n 103 (192)
T d1hh8a_ 80 YYQTEKYDLAIKDLKEALIQLRGN 103 (192)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred HHhhccHHHHHHHHHHHHHhCccC
Confidence 999999999999999999876653
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=1.1e-16 Score=120.63 Aligned_cols=98 Identities=8% Similarity=0.017 Sum_probs=89.1
Q ss_pred HhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcC---ChHHHHHHHHHHHhhCCCC--hHHHHHHHHHH
Q 018381 257 KRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD---MPQEALGDAMQAQVISPDW--PTAFYLQAAAL 331 (357)
Q Consensus 257 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~ 331 (357)
..++.+...+++++|++.|++++.++|. ++.+++|+|.|+++.+ ++++|+..+++++..+|+. +.+|+++|.+|
T Consensus 4 ~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y 82 (122)
T d1nzna_ 4 AVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN 82 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 4567788889999999999999999999 9999999999998754 5567999999999998766 56999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 018381 332 FGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+.+|+|++|+++|+++|+++|++.
T Consensus 83 ~~~g~~~~A~~~~~~aL~~~P~~~ 106 (122)
T d1nzna_ 83 YRLKEYEKALKYVRGLLQTEPQNN 106 (122)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHhhhHHHHHHHHHHHHhCcCCH
Confidence 999999999999999999999874
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.61 E-value=7.3e-16 Score=121.63 Aligned_cols=106 Identities=18% Similarity=0.135 Sum_probs=93.1
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc------------hHHHhhHHHHHHhcCChHHHHHHHHHHHhh
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS------------PTVFARRCLCYLLSDMPQEALGDAMQAQVI 316 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 316 (357)
...+...+..|...+..|+|++|+..|++||++.|. . +.+|.|+|.+|..+|+|++|+.++++++.+
T Consensus 6 ~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~-~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~ 84 (156)
T d2hr2a1 6 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 84 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChh-hhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhc
Confidence 345566677799999999999999999999998776 3 368999999999999999999999999987
Q ss_pred CCC-----------ChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 317 SPD-----------WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 317 ~p~-----------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
.|. ...+|+++|.+|..+|++++|+++|++|+++.|+..
T Consensus 85 ~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~ 134 (156)
T d2hr2a1 85 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 134 (156)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred ccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhh
Confidence 542 455899999999999999999999999999988653
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=5e-15 Score=120.88 Aligned_cols=102 Identities=16% Similarity=0.087 Sum_probs=94.9
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC-----------
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW----------- 320 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----------- 320 (357)
+..+.+.|..++..|+|++|+..|++||+++|+ ++.+|+++|.++.++|++++|+.++++|+...+.+
T Consensus 36 ~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~ 114 (192)
T d1hh8a_ 36 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQ 114 (192)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBC
T ss_pred HHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhhh
Confidence 346789999999999999999999999999999 99999999999999999999999999999876643
Q ss_pred -----hHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 321 -----PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 321 -----~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
.++++++|.++..+|++++|++.|++|+++.|+.
T Consensus 115 ~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~ 153 (192)
T d1hh8a_ 115 FKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 153 (192)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred cccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 4789999999999999999999999999998874
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.58 E-value=3.9e-16 Score=121.51 Aligned_cols=95 Identities=15% Similarity=0.087 Sum_probs=85.7
Q ss_pred hHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhc----------CChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 260 DAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS----------DMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 260 ~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~----------~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
..+-+.+.|++|+..|++|++++|+ ++.+++++|.++..+ +.+++|+..+++||+++|+++.+|+++|.
T Consensus 5 ~~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG~ 83 (145)
T d1zu2a1 5 TEFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGN 83 (145)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHHH
Confidence 3455667799999999999999999 999999999999855 55689999999999999999999999999
Q ss_pred HHHhCCC-----------hHHHHHHHHHhhccccccc
Q 018381 330 ALFGLGM-----------NNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 330 ~~~~lg~-----------~~~A~~~~~~al~l~p~~~ 355 (357)
+|..+|+ |++|+++|+++++++|++.
T Consensus 84 ~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~ 120 (145)
T d1zu2a1 84 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 120 (145)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHH
Confidence 9988764 7999999999999999864
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=6.4e-15 Score=129.74 Aligned_cols=103 Identities=15% Similarity=0.192 Sum_probs=98.0
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
+..+...|..+...|++++|+..|++++..+|+ ++.+|+++|.+|..+|++++|+..++++++++|+++.+|+.+|.+|
T Consensus 172 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 250 (323)
T d1fcha_ 172 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC 250 (323)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 345677899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 018381 332 FGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 332 ~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
..+|++++|+..|++|++++|++.
T Consensus 251 ~~~g~~~~A~~~~~~al~l~p~~~ 274 (323)
T d1fcha_ 251 INLGAHREAVEHFLEALNMQRKSR 274 (323)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHTC-
T ss_pred HHCCCHHHHHHHHHHHHHhCCcCh
Confidence 999999999999999999999864
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=8.5e-15 Score=129.08 Aligned_cols=116 Identities=9% Similarity=-0.014 Sum_probs=106.2
Q ss_pred HhhhhhhhHHHHHhHHHHHhhhHHhhcC-ChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhC
Q 018381 239 ELSFQMWTDQIQETLNSKKRGDAAFRAK-DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS 317 (357)
Q Consensus 239 ~l~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 317 (357)
........-.|.....+..+|..+...| ++++|+..|+++|+++|+ +..+|++||.++..+|++++|+.++++|++++
T Consensus 64 ~~~~~ai~lnP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~d 142 (315)
T d2h6fa1 64 KLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQD 142 (315)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHHHHHHHhhhhhhh
Confidence 3444444557888889999999998876 599999999999999999 99999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 318 PDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 318 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|++..+|+++|.++..+|++++|+++|+++++++|.+.
T Consensus 143 p~n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~p~n~ 180 (315)
T d2h6fa1 143 AKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN 180 (315)
T ss_dssp TTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred hcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHCCccH
Confidence 99999999999999999999999999999999999864
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=1.2e-14 Score=128.11 Aligned_cols=109 Identities=7% Similarity=-0.069 Sum_probs=90.9
Q ss_pred hHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHH
Q 018381 246 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 325 (357)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 325 (357)
...+.....+..+|..+...|++++|+..|+++|+++|. +..+|+++|.++..+|++++|+.+++++|+++|++..+|+
T Consensus 106 ~~~p~~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~dp~-n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~p~n~~a~~ 184 (315)
T d2h6fa1 106 EEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAK-NYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWN 184 (315)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHhhhhHHHHHhHHHHhhccHHHHHHHHhhhhhhhhc-chHHHHHHHHHHHHHHhhHHHHHHHHHHHHHCCccHHHHH
Confidence 344666777888888888888888888888888888888 8888888888888888888888888888888888888888
Q ss_pred HHHHHHHhCCC------hHHHHHHHHHhhccccccc
Q 018381 326 LQAAALFGLGM------NNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 326 ~~g~~~~~lg~------~~~A~~~~~~al~l~p~~~ 355 (357)
++|.++..+++ +++|++.+.++++++|++.
T Consensus 185 ~r~~~l~~~~~~~~~~~~~~ai~~~~~al~~~P~~~ 220 (315)
T d2h6fa1 185 QRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNE 220 (315)
T ss_dssp HHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHccccchhhhhHHhHHHHHHHHHhCCCch
Confidence 88888888776 4788888888888888764
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=1.1e-13 Score=121.58 Aligned_cols=100 Identities=14% Similarity=0.126 Sum_probs=96.5
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 333 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 333 (357)
...++|..+++.|++++|+..|+++|+.+|. ++.+|+++|.++..+|++++|+..+++|++++|+++.+|+.+|.+|..
T Consensus 21 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 99 (323)
T d1fcha_ 21 QPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTN 99 (323)
T ss_dssp SHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhccccccccccccccccccc
Confidence 3467899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhcccccc
Q 018381 334 LGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 334 lg~~~~A~~~~~~al~l~p~~ 354 (357)
+|++++|++.|++++.++|+.
T Consensus 100 ~~~~~~A~~~~~~~~~~~~~~ 120 (323)
T d1fcha_ 100 ESLQRQACEILRDWLRYTPAY 120 (323)
T ss_dssp TTCHHHHHHHHHHHHHTSTTT
T ss_pred cccccccccchhhHHHhccch
Confidence 999999999999999999874
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=1.6e-13 Score=122.48 Aligned_cols=107 Identities=14% Similarity=0.034 Sum_probs=100.0
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+..+..+...|..+...|++++|+..|++++...|. +..++..+|.++...|++++|+..++++++++|+++.+|+.+
T Consensus 267 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 345 (388)
T d1w3ba_ 267 QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNL 345 (388)
T ss_dssp CSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3445667788899999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
|.+|..+|++++|+++|+++++++|++.
T Consensus 346 a~~~~~~g~~~~A~~~~~~al~l~P~~~ 373 (388)
T d1w3ba_ 346 ASVLQQQGKLQEALMHYKEAIRISPTFA 373 (388)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHTTCTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999863
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.44 E-value=6.1e-15 Score=120.31 Aligned_cols=85 Identities=12% Similarity=0.083 Sum_probs=63.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCeeeCCCCCeEEecCCcccccCCCCccccCCCCCC------cccc
Q 018381 17 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP------PEYL 90 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~a------PE~~ 90 (357)
.++...+..++.|++.+|.|||+.+ |+||||||+|||++++ .++|+|||+++........ .|+. .+.+
T Consensus 99 ~l~~~~~~~i~~ql~~~l~~lH~~g-iiHrDiKP~NILv~~~-~~~liDFG~a~~~~~~~~~----~~l~rd~~~~~~~f 172 (191)
T d1zara2 99 RVRVENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVSEE-GIWIIDFPQSVEVGEEGWR----EILERDVRNIITYF 172 (191)
T ss_dssp GCCCSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEETT-EEEECCCTTCEETTSTTHH----HHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHhhCC-EEEccCChhheeeeCC-CEEEEECCCcccCCCCCcH----HHHHHHHHHHHHHH
Confidence 3566677889999999999999999 9999999999999965 5899999998765433211 1111 0122
Q ss_pred ccCCCCccccccchHHHH
Q 018381 91 RTGRVIPESVVYSFGTLL 108 (357)
Q Consensus 91 ~~~~~~~~~Dv~slG~~l 108 (357)
..+++.++|+||..--+
T Consensus 173 -~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 173 -SRTYRTEKDINSAIDRI 189 (191)
T ss_dssp -HHHHCCCCCHHHHHHHH
T ss_pred -cCCCCCcccHHHHHHHH
Confidence 24678889999976544
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=1.2e-13 Score=123.35 Aligned_cols=98 Identities=12% Similarity=0.028 Sum_probs=94.3
Q ss_pred HHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCC
Q 018381 256 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLG 335 (357)
Q Consensus 256 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg 335 (357)
.+.|..+++.|+|++|+..|+++++.+|+ +..+++++|.+|..+|++++|+..++++++++|+++.+|+.+|.+|..+|
T Consensus 3 l~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~g 81 (388)
T d1w3ba_ 3 MELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERG 81 (388)
T ss_dssp CTHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhhc
Confidence 45789999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhhcccccc
Q 018381 336 MNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 336 ~~~~A~~~~~~al~l~p~~ 354 (357)
++++|+..++++++.+|..
T Consensus 82 ~~~~A~~~~~~~~~~~~~~ 100 (388)
T d1w3ba_ 82 QLQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp CHHHHHHHHHHHHHHCTTC
T ss_pred ccccccccccccccccccc
Confidence 9999999999999988864
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=2.7e-13 Score=96.99 Aligned_cols=84 Identities=11% Similarity=-0.029 Sum_probs=73.8
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCC------chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV------SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 325 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 325 (357)
++...+.|..+++.|+|.+|+..|++|+++.|.. ...++.++|.++.++|++++|+..+++||+++|+++.+++
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 4566789999999999999999999999875540 3568999999999999999999999999999999999999
Q ss_pred HHHHHHHhCC
Q 018381 326 LQAAALFGLG 335 (357)
Q Consensus 326 ~~g~~~~~lg 335 (357)
+++.+...++
T Consensus 85 Nl~~~~~~l~ 94 (95)
T d1tjca_ 85 NLKYFEYIMA 94 (95)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 9988765543
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.36 E-value=6.3e-12 Score=100.67 Aligned_cols=97 Identities=10% Similarity=0.015 Sum_probs=89.7
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCch----------------------HHHhhHHHHHHhcCChHHHH
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP----------------------TVFARRCLCYLLSDMPQEAL 307 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----------------------~~~~~~a~~~~~~~~~~~A~ 307 (357)
.....+...|..+...|++++|+..|++|+++.+. +. .++.+++.++..+|++++|+
T Consensus 9 ~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG-~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al 87 (179)
T d2ff4a2 9 GRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRG-PVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 87 (179)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS-STTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-cccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH
Confidence 44567788999999999999999999999998775 32 36899999999999999999
Q ss_pred HHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHh
Q 018381 308 GDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDG 347 (357)
Q Consensus 308 ~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~a 347 (357)
.+++++++++|.+..+|..++.+|..+|++++|+..|+++
T Consensus 88 ~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~ 127 (179)
T d2ff4a2 88 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRV 127 (179)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.32 E-value=3.9e-12 Score=101.10 Aligned_cols=93 Identities=15% Similarity=0.099 Sum_probs=85.9
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+..+..+.+.|..+++.|+|++|+..|+++|+++|. ++.+|+++|.+|..+|++++|+.++++|++++|++..++..+
T Consensus 73 ~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l 151 (169)
T d1ihga1 73 QPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAEL 151 (169)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4556667788999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHH
Q 018381 328 AAALFGLGMNNDAQ 341 (357)
Q Consensus 328 g~~~~~lg~~~~A~ 341 (357)
+.+...+.++.++.
T Consensus 152 ~~~~~~l~~~~~~~ 165 (169)
T d1ihga1 152 LKVKQKIKAQKDKE 165 (169)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99988887776654
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=6.2e-12 Score=93.47 Aligned_cols=87 Identities=11% Similarity=-0.056 Sum_probs=81.2
Q ss_pred hhHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHH
Q 018381 245 WTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAF 324 (357)
Q Consensus 245 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 324 (357)
....|..+..+...|..+...|++++|+..|.++++++|. ++.+|+++|.++..+|++++|+..++++++++|+++.++
T Consensus 30 l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 108 (117)
T d1elwa_ 30 IKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLK 108 (117)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HhcCCcchhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 3446777888999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 018381 325 YLQAAALF 332 (357)
Q Consensus 325 ~~~g~~~~ 332 (357)
..++.+..
T Consensus 109 ~~l~~l~~ 116 (117)
T d1elwa_ 109 EGLQNMEA 116 (117)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhC
Confidence 99988754
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.31 E-value=4.5e-12 Score=107.43 Aligned_cols=91 Identities=18% Similarity=0.177 Sum_probs=80.8
Q ss_pred cCChhHHHHHHHHHhccCCC---CchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHH
Q 018381 265 AKDFPTAIECYTHFIDGGTM---VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQ 341 (357)
Q Consensus 265 ~~~~~~A~~~~~~ai~~~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~ 341 (357)
..+++.|+..+++++...+. ..+.+|+++|.+|..+|++++|+..+++||+++|+++.+|+++|.++..+|++++|+
T Consensus 12 ~~~~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A~ 91 (259)
T d1xnfa_ 12 TLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAY 91 (259)
T ss_dssp CHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHHhh
Confidence 34567788888888864332 156799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccccc
Q 018381 342 ETLKDGTNLEAKKH 355 (357)
Q Consensus 342 ~~~~~al~l~p~~~ 355 (357)
.+|+++++++|++.
T Consensus 92 ~~~~~al~~~p~~~ 105 (259)
T d1xnfa_ 92 EAFDSVLELDPTYN 105 (259)
T ss_dssp HHHHHHHHHCTTCT
T ss_pred hhhhHHHHHHhhhh
Confidence 99999999999854
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.25 E-value=2.4e-11 Score=96.38 Aligned_cols=96 Identities=15% Similarity=0.103 Sum_probs=85.0
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 331 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 331 (357)
+..+.+.|..+++.|+|++|+..|+++|+++|. +..+|+++|.+|..+|+|++|+.++.++++++|++..++..++.+.
T Consensus 64 ~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 142 (168)
T d1kt1a1 64 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQ 142 (168)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 344567899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHH-HHHHHHHhh
Q 018381 332 FGLGMNND-AQETLKDGT 348 (357)
Q Consensus 332 ~~lg~~~~-A~~~~~~al 348 (357)
..++++.+ ..+.|.+.+
T Consensus 143 ~~~~~~~e~~kk~~~~~f 160 (168)
T d1kt1a1 143 KKAKEHNERDRRTYANMF 160 (168)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHH
Confidence 88887754 444444433
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=1.9e-11 Score=95.98 Aligned_cols=100 Identities=14% Similarity=-0.039 Sum_probs=88.1
Q ss_pred hhHHHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHH
Q 018381 245 WTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAF 324 (357)
Q Consensus 245 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 324 (357)
..-.+..+..+...|..++..|++++|+..|.++|+++|. +..+|+++|.++..+|++++|+.+++++++++|+++.++
T Consensus 37 l~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~ 115 (159)
T d1a17a_ 37 IELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAK 115 (159)
T ss_dssp HHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred cccchhhhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 3445777888999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHH--hCCChHHHHHHHH
Q 018381 325 YLQAAALF--GLGMNNDAQETLK 345 (357)
Q Consensus 325 ~~~g~~~~--~lg~~~~A~~~~~ 345 (357)
..++.+.. ..+.+++|+...+
T Consensus 116 ~~l~~~~~~~~~~~~~~a~~~~~ 138 (159)
T d1a17a_ 116 MKYQECNKIVKQKAFERAIAGDE 138 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcH
Confidence 88887754 4455777765433
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=1.6e-11 Score=97.63 Aligned_cols=88 Identities=14% Similarity=0.058 Sum_probs=81.9
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 333 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 333 (357)
.+...|..+++.|+|++|+..++++|+++|. +..+|+++|.||+.+|+|++|+.++++|++++|+++.+...++.+...
T Consensus 64 ~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 142 (170)
T d1p5qa1 64 SHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQR 142 (170)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4556889999999999999999999999999 999999999999999999999999999999999999999999999988
Q ss_pred CCChHHHHH
Q 018381 334 LGMNNDAQE 342 (357)
Q Consensus 334 lg~~~~A~~ 342 (357)
++++.+...
T Consensus 143 ~~~~~~~e~ 151 (170)
T d1p5qa1 143 IRRQLAREK 151 (170)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887776543
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.21 E-value=1.3e-11 Score=88.01 Aligned_cols=70 Identities=10% Similarity=-0.147 Sum_probs=64.1
Q ss_pred chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC-------hHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 286 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW-------PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 286 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
++.-++++|.++++.|+|++|+..+++|+++.|.+ +.+++++|.+++.+|++++|+..|+++|+++|++.
T Consensus 4 saddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~ 80 (95)
T d1tjca_ 4 TAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (95)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCH
Confidence 45668899999999999999999999999987654 67899999999999999999999999999999864
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.19 E-value=2.6e-11 Score=94.57 Aligned_cols=83 Identities=12% Similarity=0.080 Sum_probs=76.9
Q ss_pred HHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q 018381 253 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALF 332 (357)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 332 (357)
..+.+.|..+++.|+|++|+..|+++|+++|. +..+|+++|.+|..+|++++|+.+++++++++|++..+...++.+..
T Consensus 68 ~~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 146 (153)
T d2fbna1 68 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVN 146 (153)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 35567899999999999999999999999999 99999999999999999999999999999999999999999988876
Q ss_pred hCCC
Q 018381 333 GLGM 336 (357)
Q Consensus 333 ~lg~ 336 (357)
++++
T Consensus 147 kl~~ 150 (153)
T d2fbna1 147 KLKE 150 (153)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=1.7e-11 Score=92.52 Aligned_cols=70 Identities=17% Similarity=0.029 Sum_probs=66.3
Q ss_pred hHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccccC
Q 018381 287 PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHR 356 (357)
Q Consensus 287 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~~ 356 (357)
+..+.++|.+++..|+|++|+..|++||+++|+++.+++++|.+|..+|+|++|+.+|+++++++|++..
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~ 73 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENRE 73 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHH
Confidence 4567899999999999999999999999999999999999999999999999999999999999998643
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.19 E-value=1.5e-11 Score=90.50 Aligned_cols=69 Identities=14% Similarity=-0.060 Sum_probs=65.4
Q ss_pred hHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 287 PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 287 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
...++++|.++++.|++++|+..++++++++|+++.+|+.+|.++..+|++++|+.+|+++++++|++.
T Consensus 16 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 84 (112)
T d1hxia_ 16 HENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI 84 (112)
T ss_dssp CSCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccc
Confidence 345788999999999999999999999999999999999999999999999999999999999999863
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.18 E-value=3.4e-11 Score=97.88 Aligned_cols=70 Identities=11% Similarity=0.034 Sum_probs=67.0
Q ss_pred chHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 286 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 286 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
++..+.+.|..+++.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++.
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~ 72 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSV 72 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcH
Confidence 5677889999999999999999999999999999999999999999999999999999999999999863
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=4.1e-11 Score=89.40 Aligned_cols=90 Identities=10% Similarity=-0.065 Sum_probs=76.7
Q ss_pred hhhHHHHHhHHHHHhhhHHhhc---CChhHHHHHHHHHhccCCCCc--hHHHhhHHHHHHhcCChHHHHHHHHHHHhhCC
Q 018381 244 MWTDQIQETLNSKKRGDAAFRA---KDFPTAIECYTHFIDGGTMVS--PTVFARRCLCYLLSDMPQEALGDAMQAQVISP 318 (357)
Q Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~---~~~~~A~~~~~~ai~~~p~~~--~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p 318 (357)
.....+..+....+.|..+++. +++++|+..|++++..+|. + ..+|+++|.+|..+|+|++|+..++++|+++|
T Consensus 25 aL~~~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~-~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P 103 (122)
T d1nzna_ 25 EKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSK-EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEP 103 (122)
T ss_dssp HHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHhhCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCc
Confidence 3344566677888999999864 4566899999999999886 4 45899999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhC
Q 018381 319 DWPTAFYLQAAALFGL 334 (357)
Q Consensus 319 ~~~~a~~~~g~~~~~l 334 (357)
++..|...++.+.-++
T Consensus 104 ~~~~A~~l~~~I~~~~ 119 (122)
T d1nzna_ 104 QNNQAKELERLIDKAM 119 (122)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999998877554
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.05 E-value=8.4e-11 Score=90.67 Aligned_cols=93 Identities=12% Similarity=-0.054 Sum_probs=78.6
Q ss_pred HHHHHhHHHHHhhhHHhh----------cCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCC-----------hHH
Q 018381 247 DQIQETLNSKKRGDAAFR----------AKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM-----------PQE 305 (357)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~----------~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-----------~~~ 305 (357)
..|.++..+...|..+.. .+.+++|+..|++||+++|+ ++.+|+++|.+|..+|+ |++
T Consensus 26 ~~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~~~~~~~~~~~~~~ 104 (145)
T d1zu2a1 26 SNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDL 104 (145)
T ss_dssp HCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred hCCcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccchhhHHHHHHhHHH
Confidence 356667777777777764 45568999999999999999 99999999999988764 799
Q ss_pred HHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHH
Q 018381 306 ALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDA 340 (357)
Q Consensus 306 A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A 340 (357)
|++.+++|++++|++..++..++.+....+.+.++
T Consensus 105 A~~~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~ 139 (145)
T d1zu2a1 105 ATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEA 139 (145)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred hhhhhhcccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987666555554
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=99.03 E-value=4e-10 Score=95.62 Aligned_cols=96 Identities=11% Similarity=0.008 Sum_probs=83.0
Q ss_pred hhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH----------
Q 018381 258 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ---------- 327 (357)
Q Consensus 258 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~---------- 327 (357)
++..+++.|++++|+..|+++|+.+|. +..++.+++.+|+..|++++|+..++++++++|++..++..+
T Consensus 2 q~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~ 80 (264)
T d1zbpa1 2 QWKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQAR 80 (264)
T ss_dssp CHHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccc
Confidence 467789999999999999999999999 999999999999999999999999999999999988777665
Q ss_pred -------------------------HHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 328 -------------------------AAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 328 -------------------------g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
+.++...|++++|.+.++++.++.|..
T Consensus 81 ~~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~ 132 (264)
T d1zbpa1 81 KDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEK 132 (264)
T ss_dssp HHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCC
Confidence 444445677788888888877777754
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=1.6e-10 Score=107.63 Aligned_cols=104 Identities=7% Similarity=-0.097 Sum_probs=70.6
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
.+.....+...|..+.+.|++++|+..|.+++..+| ..++.++|.++...|+|++|+.+|.+|++++|+++.+|+++
T Consensus 116 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~---~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~L 192 (497)
T d1ya0a1 116 DLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC---QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQL 192 (497)
T ss_dssp ---------------------------CCHHHHHHH---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHH
T ss_pred ChhhHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCH---HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHH
Confidence 345566677889999999999999999999998765 35788999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 328 AAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 328 g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
|.++...|++.+|+.+|.+|+.++|..
T Consensus 193 g~~~~~~~~~~~A~~~y~ral~~~~~~ 219 (497)
T d1ya0a1 193 AILASSKGDHLTTIFYYCRSIAVKFPF 219 (497)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHSSSBCC
T ss_pred HHHHHHcCCHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999998864
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.93 E-value=2.2e-09 Score=94.26 Aligned_cols=95 Identities=7% Similarity=-0.093 Sum_probs=53.7
Q ss_pred hhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCC--hHHHHHHHHHHHhhCCCChHHH-HHHHHHHHhCC
Q 018381 259 GDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM--PQEALGDAMQAQVISPDWPTAF-YLQAAALFGLG 335 (357)
Q Consensus 259 g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~--~~~A~~~~~~al~~~p~~~~a~-~~~g~~~~~lg 335 (357)
+......|++++|+.+|+++++.+|+ ++.+|+++|.++..+++ +++|+..+.++++++|.+..++ +.+|.++...|
T Consensus 80 ~~~~~~~~~~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
T d1dcea1 80 KSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAV 158 (334)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCC
T ss_pred cchHHHHHHHHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCchhhhhhhhHHHHHHHhcc
Confidence 44444445555666666666666665 66666666555555443 5566666666666666555554 34455555556
Q ss_pred ChHHHHHHHHHhhcccccc
Q 018381 336 MNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 336 ~~~~A~~~~~~al~l~p~~ 354 (357)
++++|+..++++++++|++
T Consensus 159 ~~~~Al~~~~~~i~~~p~~ 177 (334)
T d1dcea1 159 APAEELAFTDSLITRNFSN 177 (334)
T ss_dssp CHHHHHHHHHTTTTTTCCC
T ss_pred ccHHHHHHHHHHHHcCCCC
Confidence 6666666666666666543
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.92 E-value=8.6e-10 Score=95.14 Aligned_cols=105 Identities=10% Similarity=-0.012 Sum_probs=90.0
Q ss_pred HHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccC-----CCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC---
Q 018381 249 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGG-----TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--- 320 (357)
Q Consensus 249 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-----p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--- 320 (357)
...+..+.+.|+.+...|+|++|+.+|.+|+++. +...+.+|.++|.||..+|++++|+..+++++++.+..
T Consensus 34 ~~Aa~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~ 113 (290)
T d1qqea_ 34 EEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQF 113 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccc
Confidence 4556778888999999999999999999999862 21145689999999999999999999999999987766
Q ss_pred ---hHHHHHHHHHHHh-CCChHHHHHHHHHhhccccc
Q 018381 321 ---PTAFYLQAAALFG-LGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 321 ---~~a~~~~g~~~~~-lg~~~~A~~~~~~al~l~p~ 353 (357)
..++..+|.++.. +|++++|++.|++|+++.+.
T Consensus 114 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~ 150 (290)
T d1qqea_ 114 RRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQ 150 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 6788899998855 79999999999999988664
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.85 E-value=9.7e-09 Score=90.04 Aligned_cols=90 Identities=11% Similarity=0.020 Sum_probs=80.8
Q ss_pred hcCC-hhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCC----------hHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q 018381 264 RAKD-FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM----------PQEALGDAMQAQVISPDWPTAFYLQAAALF 332 (357)
Q Consensus 264 ~~~~-~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~----------~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 332 (357)
..++ .++|+..|+++|+++|+ +..+|+.|+.++..+++ +++|+..++++++.+|++..+|+.+|.++.
T Consensus 40 ~~~~~~~~al~~~~~~l~~~P~-~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk~~~~~~~~~~~~~ 118 (334)
T d1dcea1 40 QAGELDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118 (334)
T ss_dssp HTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hcccccHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHhhHHHH
Confidence 4444 48999999999999999 99999998888665544 789999999999999999999999999999
Q ss_pred hCCC--hHHHHHHHHHhhcccccc
Q 018381 333 GLGM--NNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 333 ~lg~--~~~A~~~~~~al~l~p~~ 354 (357)
.+++ +++|+..++++++++|++
T Consensus 119 ~~~~~~~~~a~~~~~~al~~~~~~ 142 (334)
T d1dcea1 119 RLPEPNWARELELCARFLEADERN 142 (334)
T ss_dssp TCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred HhccccHHHHHHHHHHHHhhCchh
Confidence 9886 899999999999999975
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.82 E-value=5.3e-09 Score=90.04 Aligned_cols=106 Identities=8% Similarity=-0.180 Sum_probs=90.7
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc------hHHHhhHHHHHHh-cCChHHHHHHHHHHHhhCCC-
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS------PTVFARRCLCYLL-SDMPQEALGDAMQAQVISPD- 319 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~- 319 (357)
....+..+.+.|..+.+.|++++|+.+|++++++.+. . ..++.++|.+|.. .|++++|+..+.+|+++.+.
T Consensus 73 ~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~ 151 (290)
T d1qqea_ 73 EDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTH-RGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD 151 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhh-cccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 3455778889999999999999999999999986554 3 5678899988865 69999999999999987532
Q ss_pred -----ChHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 018381 320 -----WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 320 -----~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~ 354 (357)
...++.++|.++..+|+|++|+..|+++++..|..
T Consensus 152 ~~~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~ 191 (290)
T d1qqea_ 152 QSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (290)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred CchhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccc
Confidence 35678999999999999999999999999988764
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.76 E-value=1.9e-08 Score=87.45 Aligned_cols=102 Identities=13% Similarity=-0.005 Sum_probs=89.0
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCc-----hHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCC-----
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS-----PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW----- 320 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----- 320 (357)
.++....+|..++..|++++|+..|+++++..|. + ..++.++|.+|..+|++++|+..+++++++.+..
T Consensus 11 ~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~-~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 89 (366)
T d1hz4a_ 11 HAEFNALRAQVAINDGNPDEAERLAKLALEELPP-GWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHY 89 (366)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCT-TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-CCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcchHH
Confidence 3444556799999999999999999999999998 5 3578999999999999999999999999876543
Q ss_pred -hHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 321 -PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 321 -~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
..+++.+|.++...|++..|...+.+++++.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~ 123 (366)
T d1hz4a_ 90 ALWSLIQQSEILFAQGFLQTAWETQEKAFQLINE 123 (366)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 467889999999999999999999999987654
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.60 E-value=6.3e-08 Score=89.72 Aligned_cols=82 Identities=12% Similarity=-0.061 Sum_probs=77.5
Q ss_pred HHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q 018381 253 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALF 332 (357)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 332 (357)
..+...|..+...|+|++|+..|.+|++++|+ +..+|+++|.++...|++.+|+.+|.+||.++|.++.|+.+++.++.
T Consensus 153 ~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~~~ 231 (497)
T d1ya0a1 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 46778899999999999999999999999999 99999999999999999999999999999999999999999999886
Q ss_pred hCC
Q 018381 333 GLG 335 (357)
Q Consensus 333 ~lg 335 (357)
...
T Consensus 232 ~~~ 234 (497)
T d1ya0a1 232 KAL 234 (497)
T ss_dssp HHT
T ss_pred Hhh
Confidence 543
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.58 E-value=3.9e-08 Score=76.25 Aligned_cols=67 Identities=19% Similarity=0.117 Sum_probs=58.9
Q ss_pred hHHHhhH--HHHHHhcCChHHHHHHHHHHHhhCCCCh------------HHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 018381 287 PTVFARR--CLCYLLSDMPQEALGDAMQAQVISPDWP------------TAFYLQAAALFGLGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 287 ~~~~~~~--a~~~~~~~~~~~A~~~~~~al~~~p~~~------------~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p 352 (357)
+.+|.++ |..++..|+|++|+..|++||+++|+.+ .+|.++|.+|..+|+|++|++++++++++.|
T Consensus 7 a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~ 86 (156)
T d2hr2a1 7 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 86 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhccc
Confidence 3455555 7788899999999999999999998764 5799999999999999999999999999877
Q ss_pred c
Q 018381 353 K 353 (357)
Q Consensus 353 ~ 353 (357)
+
T Consensus 87 ~ 87 (156)
T d2hr2a1 87 R 87 (156)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.58 E-value=5.5e-08 Score=84.46 Aligned_cols=104 Identities=15% Similarity=0.008 Sum_probs=89.6
Q ss_pred HHhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCC---chHHHhhHHHHHHhcCChHHHHHHHHHHHh------hCCCC
Q 018381 250 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV---SPTVFARRCLCYLLSDMPQEALGDAMQAQV------ISPDW 320 (357)
Q Consensus 250 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~al~------~~p~~ 320 (357)
.....+...|..+...|++++|...+.++++..+.. ....+.++|.++..+|++++|+..+++++. ..|..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 290 (366)
T d1hz4a_ 211 WISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDL 290 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHH
Confidence 344556677888999999999999999999887761 234678899999999999999999999984 45777
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 018381 321 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 321 ~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~ 353 (357)
..+++.+|.+|..+|++++|++.|++|+++.+.
T Consensus 291 ~~~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~ 323 (366)
T d1hz4a_ 291 NRNLLLLNQLYWQAGRKSDAQRVLLDALKLANR 323 (366)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhh
Confidence 889999999999999999999999999998654
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.55 E-value=1.4e-07 Score=68.65 Aligned_cols=62 Identities=5% Similarity=-0.198 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHH
Q 018381 268 FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 329 (357)
Q Consensus 268 ~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 329 (357)
.++|+.+++++++.+|.....+++++|.+|+++|+|++|+..++++|+++|++..|...+-.
T Consensus 54 ~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~~ 115 (124)
T d2pqrb1 54 ERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 115 (124)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHHH
Confidence 34555555555555554112455555555555555555555555555555555555444433
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.40 E-value=3.2e-07 Score=66.70 Aligned_cols=73 Identities=8% Similarity=-0.027 Sum_probs=64.3
Q ss_pred CCCchHHHhhHHHHHHhcCC---hHHHHHHHHHHHhhCCCCh-HHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 283 TMVSPTVFARRCLCYLLSDM---PQEALGDAMQAQVISPDWP-TAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 283 p~~~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~~~-~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
+.+.....++.|.++.+..+ .++||..++.++..+|... +++|++|.+|+.+|+|++|+.+++++|+++|+|.
T Consensus 31 ~~~s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~ 107 (124)
T d2pqrb1 31 PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 107 (124)
T ss_dssp GGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCCCcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcH
Confidence 44467788999999987644 5799999999999999765 8999999999999999999999999999999874
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.33 E-value=3.6e-07 Score=77.00 Aligned_cols=61 Identities=21% Similarity=-0.008 Sum_probs=57.5
Q ss_pred HHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 018381 295 LCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 355 (357)
Q Consensus 295 ~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~p~~~ 355 (357)
.-.+..|++++|+..++++|+.+|+++.++..+|.+|+..|++++|++.|+++++++|+..
T Consensus 4 ~~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~ 64 (264)
T d1zbpa1 4 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 64 (264)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcH
Confidence 4467889999999999999999999999999999999999999999999999999999863
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.28 E-value=2.4e-06 Score=73.56 Aligned_cols=98 Identities=12% Similarity=-0.021 Sum_probs=81.7
Q ss_pred HHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHH-HhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 018381 255 SKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCY-LLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 333 (357)
Q Consensus 255 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~-~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 333 (357)
+...+....+.|+++.|...|.++++..|. ....|...|... ...|+.+.|...+++++...|+++..|...+..+..
T Consensus 137 w~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~~ 215 (308)
T d2onda1 137 YIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH 215 (308)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 456666777788889999999999999888 888888887764 446888889999999999999999999999998889
Q ss_pred CCChHHHHHHHHHhhccccc
Q 018381 334 LGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 334 lg~~~~A~~~~~~al~l~p~ 353 (357)
.|+++.|...|++|++..|.
T Consensus 216 ~g~~~~aR~~fe~ai~~~~~ 235 (308)
T d2onda1 216 LNEDNNTRVLFERVLTSGSL 235 (308)
T ss_dssp TCCHHHHHHHHHHHHHSSSS
T ss_pred cCChHHHHHHHHHHHHhCCC
Confidence 99999999999999886653
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.19 E-value=4.9e-06 Score=71.50 Aligned_cols=101 Identities=7% Similarity=-0.090 Sum_probs=89.6
Q ss_pred HHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHH-
Q 018381 254 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALF- 332 (357)
Q Consensus 254 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~- 332 (357)
.+...+......|++++|...|+++++..|.....+|...+......|+++.|+..+.+|++..|.....|...|....
T Consensus 101 l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e~~ 180 (308)
T d2onda1 101 LYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYY 180 (308)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 4556677778899999999999999999998234579999999999999999999999999999999999999998754
Q ss_pred hCCChHHHHHHHHHhhcccccc
Q 018381 333 GLGMNNDAQETLKDGTNLEAKK 354 (357)
Q Consensus 333 ~lg~~~~A~~~~~~al~l~p~~ 354 (357)
..|+.+.|...|+++++.+|++
T Consensus 181 ~~~~~~~a~~i~e~~l~~~p~~ 202 (308)
T d2onda1 181 CSKDKSVAFKIFELGLKKYGDI 202 (308)
T ss_dssp TSCCHHHHHHHHHHHHHHHTTC
T ss_pred hccCHHHHHHHHHHHHHhhhhh
Confidence 5689999999999999998875
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.10 E-value=5.2e-06 Score=65.35 Aligned_cols=68 Identities=18% Similarity=0.227 Sum_probs=62.0
Q ss_pred HhHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHH-------HhhCCC
Q 018381 251 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQA-------QVISPD 319 (357)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a-------l~~~p~ 319 (357)
....+...|..+...|++++|+..++++++.+|. +..+|.+++.+|..+|++.+|+..|+++ +.++|+
T Consensus 66 ~~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~ 140 (179)
T d2ff4a2 66 KVLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG 140 (179)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 3456678899999999999999999999999999 9999999999999999999999999997 456775
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=98.08 E-value=1.8e-05 Score=66.06 Aligned_cols=96 Identities=14% Similarity=0.116 Sum_probs=83.9
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCChHHHHHH
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWPTAFYLQ 327 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~ 327 (357)
+..+...|..++..+|+++|++.|++|.+. . +..+++++|.+|.. ..++..|+..+.++... +++.+.+.+
T Consensus 2 p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~--g-~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~--~~~~a~~~l 76 (265)
T d1ouva_ 2 PKELVGLGAKSYKEKDFTQAKKYFEKACDL--K-ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL--NYSNGCHLL 76 (265)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCcchhHHHHHHhhcccccc--cccchhhcc
Confidence 457788999999999999999999999876 4 78899999999997 67999999999998765 588999999
Q ss_pred HHHHHh----CCChHHHHHHHHHhhcccc
Q 018381 328 AAALFG----LGMNNDAQETLKDGTNLEA 352 (357)
Q Consensus 328 g~~~~~----lg~~~~A~~~~~~al~l~p 352 (357)
|..+.. ..+.+.|...|+++.+..+
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~a~~~g~ 105 (265)
T d1ouva_ 77 GNLYYSGQGVSQNTNKALQYYSKACDLKY 105 (265)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred ccccccccccchhhHHHHHHHhhhhhhhh
Confidence 998875 5688999999999987654
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.90 E-value=5.8e-05 Score=55.93 Aligned_cols=83 Identities=8% Similarity=-0.063 Sum_probs=72.8
Q ss_pred hcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHh----CC
Q 018381 264 RAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG----LG 335 (357)
Q Consensus 264 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----lg 335 (357)
...++++|+..|+++.+. . ++.+.+++|.+|.. ..++++|+..+++|.+. +++.+.+++|.+|.. ..
T Consensus 35 ~~~~~~~a~~~~~~aa~~--g-~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~G~gv~~ 109 (133)
T d1klxa_ 35 SQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVK 109 (133)
T ss_dssp TTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCC
T ss_pred cccCHHHHHHHHhhhhcc--c-chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHHHcCCccCC
Confidence 456899999999999986 4 78899999999986 57799999999999876 689999999999887 46
Q ss_pred ChHHHHHHHHHhhccc
Q 018381 336 MNNDAQETLKDGTNLE 351 (357)
Q Consensus 336 ~~~~A~~~~~~al~l~ 351 (357)
++++|+..|++|.++.
T Consensus 110 d~~~A~~~~~~Aa~~G 125 (133)
T d1klxa_ 110 NEKQAVKTFEKACRLG 125 (133)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHCC
Confidence 8999999999998764
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.61 E-value=0.00021 Score=59.25 Aligned_cols=95 Identities=20% Similarity=0.141 Sum_probs=78.0
Q ss_pred HHHHhhhHHhh----cCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCChHHHH
Q 018381 254 NSKKRGDAAFR----AKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWPTAFY 325 (357)
Q Consensus 254 ~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~ 325 (357)
.....|..+.. ..+...+...++.+.+. . +..+.+++|.+|.. ..++++|+.++.+|.+. +++.+++
T Consensus 144 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~--g-~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~ 218 (265)
T d1ouva_ 144 GCTILGSLYDAGRGTPKDLKKALASYDKACDL--K-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENGGGCF 218 (265)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCHHHHH
T ss_pred hhhhhhhhhccCCCcccccccchhhhhccccc--c-ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCHHHHH
Confidence 34455666654 56777888888888864 4 78899999999987 67999999999999887 5899999
Q ss_pred HHHHHHHh----CCChHHHHHHHHHhhccccc
Q 018381 326 LQAAALFG----LGMNNDAQETLKDGTNLEAK 353 (357)
Q Consensus 326 ~~g~~~~~----lg~~~~A~~~~~~al~l~p~ 353 (357)
++|.+|.. ..++++|+++|++|.++...
T Consensus 219 ~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~ 250 (265)
T d1ouva_ 219 NLGAMQYNGEGVTRNEKQAIENFKKGCKLGAK 250 (265)
T ss_dssp HHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCH
T ss_pred HHHHHHHcCCCCccCHHHHHHHHHHHHHCcCH
Confidence 99999986 44899999999999887553
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.35 E-value=0.00036 Score=51.42 Aligned_cols=79 Identities=11% Similarity=-0.058 Sum_probs=65.4
Q ss_pred CChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHh----CCChHHHH
Q 018381 266 KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG----LGMNNDAQ 341 (357)
Q Consensus 266 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----lg~~~~A~ 341 (357)
+|+++|+..|+++.+.. +..+.++++. ....++++|+..+++|.+. +++.+++.+|..|.. ..++++|+
T Consensus 7 kd~~~A~~~~~kaa~~g---~~~a~~~l~~--~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~A~ 79 (133)
T d1klxa_ 7 KDLKKAIQYYVKACELN---EMFGCLSLVS--NSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 79 (133)
T ss_dssp HHHHHHHHHHHHHHHTT---CTTHHHHHHT--CTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHHCC---Chhhhhhhcc--ccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHHHH
Confidence 47899999999999875 4455666653 4567899999999999875 799999999999876 46789999
Q ss_pred HHHHHhhccc
Q 018381 342 ETLKDGTNLE 351 (357)
Q Consensus 342 ~~~~~al~l~ 351 (357)
+.|+++.+..
T Consensus 80 ~~~~~aa~~g 89 (133)
T d1klxa_ 80 QYYSKACGLN 89 (133)
T ss_dssp HHHHHHHHTT
T ss_pred HHHhhhhccC
Confidence 9999998763
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.76 E-value=0.007 Score=51.17 Aligned_cols=27 Identities=22% Similarity=0.171 Sum_probs=24.7
Q ss_pred ceeecCCCCCeeeCCCCCeEEecCCcc
Q 018381 43 ALYHDLNTYRILFDQDGNPRLSCFGLM 69 (357)
Q Consensus 43 iiH~dlkp~Nill~~~~~~kl~Dfg~~ 69 (357)
+||+|+.++||+++.+...-|.||+.+
T Consensus 185 iIHgDl~~dNvl~~~~~v~gvIDF~~~ 211 (316)
T d2ppqa1 185 VIHADLFQDNVFFLGDELSGLIDFYFA 211 (316)
T ss_dssp EECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred cccCCcchhhhhcccccceeEeccccc
Confidence 999999999999998877789999974
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.14 E-value=0.016 Score=47.18 Aligned_cols=28 Identities=14% Similarity=0.051 Sum_probs=24.2
Q ss_pred ceeecCCCCCeeeCCCCCeEEecCCccc
Q 018381 43 ALYHDLNTYRILFDQDGNPRLSCFGLMK 70 (357)
Q Consensus 43 iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 70 (357)
++|+|+.|.|||+++++.+-|+||+.+.
T Consensus 185 l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 185 FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred EEEeeccCcceeecCCceEEEeechhcc
Confidence 7999999999999977666799998653
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=92.36 E-value=0.017 Score=46.75 Aligned_cols=28 Identities=11% Similarity=0.012 Sum_probs=24.3
Q ss_pred ceeecCCCCCeeeCCCCCeEEecCCccc
Q 018381 43 ALYHDLNTYRILFDQDGNPRLSCFGLMK 70 (357)
Q Consensus 43 iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 70 (357)
++|+|+.|.|||++++..+-|+||+.+.
T Consensus 177 liHgD~~~~Nvl~~~~~~~~iID~~~~~ 204 (255)
T d1nd4a_ 177 VTHGDACLPNIMVENGRFSGFIDCGRLG 204 (255)
T ss_dssp EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence 7999999999999977667899998643
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=90.08 E-value=0.057 Score=46.93 Aligned_cols=26 Identities=15% Similarity=0.105 Sum_probs=22.9
Q ss_pred ceeecCCCCCeeeCCCCCeEEecCCcc
Q 018381 43 ALYHDLNTYRILFDQDGNPRLSCFGLM 69 (357)
Q Consensus 43 iiH~dlkp~Nill~~~~~~kl~Dfg~~ 69 (357)
++|+|+.|.|||+++++ ++|+||..+
T Consensus 225 LiHGDl~~gNIlv~~~~-~~vID~E~a 250 (392)
T d2pula1 225 LIHGDLHTGSIFASEHE-TKVIDPEFA 250 (392)
T ss_dssp EECSCCCGGGEEECSSC-EEECCCTTC
T ss_pred eeccCCcCCceeEcCCc-eEEechhhc
Confidence 99999999999999664 899999764
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=89.98 E-value=0.099 Score=43.98 Aligned_cols=26 Identities=19% Similarity=0.222 Sum_probs=21.8
Q ss_pred ceeecCCCCCeeeCCCCCeEEecCCccc
Q 018381 43 ALYHDLNTYRILFDQDGNPRLSCFGLMK 70 (357)
Q Consensus 43 iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 70 (357)
+||+|+.+.|||++++ ..++||+-+.
T Consensus 194 liHgDlh~~NvL~~~~--~~~IDFdd~~ 219 (325)
T d1zyla1 194 RLHGDCHAGNILWRDG--PMFVDLDDAR 219 (325)
T ss_dssp ECCSSCSGGGEEESSS--EEECCCTTCC
T ss_pred eecCCCCcccEEEeCC--ceEEechhcc
Confidence 8999999999999743 4589998765
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.62 E-value=0.23 Score=33.09 Aligned_cols=33 Identities=21% Similarity=0.289 Sum_probs=28.3
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhc
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFID 280 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~ 280 (357)
....+..+..+|..+-..|+|++|+.+|.++|+
T Consensus 11 ~~~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie 43 (93)
T d1wfda_ 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345677788999999999999999999999975
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=86.82 E-value=0.33 Score=30.96 Aligned_cols=23 Identities=26% Similarity=0.196 Sum_probs=11.1
Q ss_pred hhHHHHHHhcCChHHHHHHHHHH
Q 018381 291 ARRCLCYLLSDMPQEALGDAMQA 313 (357)
Q Consensus 291 ~~~a~~~~~~~~~~~A~~~~~~a 313 (357)
..+|..+++.|+|++||+..++|
T Consensus 12 ~RrAer~l~~~rydeAIech~kA 34 (83)
T d2crba1 12 SRRADRLLAAGKYEEAISCHRKA 34 (83)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Confidence 33444445555555555554444
|
| >d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B, SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Vacuolar sorting protein 4b (VPS4B, SKD1 protein) species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.71 E-value=0.32 Score=31.08 Aligned_cols=33 Identities=15% Similarity=0.409 Sum_probs=28.3
Q ss_pred HHHHhHHHHHhhhHHhhcCChhHHHHHHHHHhc
Q 018381 248 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFID 280 (357)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~ 280 (357)
..+.+..+..+|..+-..|+|++|+.+|.+|++
T Consensus 7 ~l~~A~~l~~~Av~~D~~~~y~~A~~~Y~~a~~ 39 (77)
T d1wr0a1 7 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQ 39 (77)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345677888899999999999999999999886
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.11 E-value=0.64 Score=29.55 Aligned_cols=29 Identities=21% Similarity=0.364 Sum_probs=23.4
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhc
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFID 280 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~ 280 (357)
+-..-..|+.+.+.|+|++||+++++|..
T Consensus 8 AH~~~RrAer~l~~~rydeAIech~kA~~ 36 (83)
T d2crba1 8 AHQQSRRADRLLAAGKYEEAISCHRKATT 36 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34455778899999999999999987753
|
| >d1qsaa1 a.118.5.1 (A:1-450) 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Bacterial muramidases family: Bacterial muramidases domain: 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain species: Escherichia coli [TaxId: 562]
Probab=82.69 E-value=3.3 Score=35.77 Aligned_cols=89 Identities=13% Similarity=-0.003 Sum_probs=64.3
Q ss_pred hhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCChH
Q 018381 259 GDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNN 338 (357)
Q Consensus 259 g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~ 338 (357)
+...+..+..+.|............. .. ....++...+..+++..+...+...-.-....+.+.|-+|.++..+|+.+
T Consensus 259 a~~~~~~~~~~~a~~~~~~~~~~~~~-~~-~~~w~~~~al~~~~~~~~~~~~~~l~~~~~~~~r~~YW~gRa~~~~G~~~ 336 (450)
T d1qsaa1 259 AWRLMGNDVTDEQAKWRDDAIMRSQS-TS-LIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREA 336 (450)
T ss_dssp HHTSCSTTCCHHHHHHHHHHHHTCCC-HH-HHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcCchHHHHHHHHhhcccccc-hH-HHHHHHHHHHHcCChHHHHHHHHhcCcccccHHHHHHHHHHHHHHcCChh
Confidence 44445667778888888777665544 33 33333334556789999888887654333456788999999999999999
Q ss_pred HHHHHHHHhhc
Q 018381 339 DAQETLKDGTN 349 (357)
Q Consensus 339 ~A~~~~~~al~ 349 (357)
+|...|..+..
T Consensus 337 ~A~~~~~~~a~ 347 (450)
T d1qsaa1 337 EAKEILHQLMQ 347 (450)
T ss_dssp HHHHHHHHHHT
T ss_pred hHHHHHHHHhc
Confidence 99999998765
|
| >d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-hydrolase/oxidoreductase superfamily: Metallo-hydrolase/oxidoreductase family: Alkylsulfatase-like domain: Alkylsulfatase SdsA1 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=80.03 E-value=0.85 Score=40.56 Aligned_cols=51 Identities=4% Similarity=-0.012 Sum_probs=34.3
Q ss_pred hHHHHHhhhHHhhcCChhHHHHHHHHHhccCCCCchHHHhhHHHHHHhcCCh
Q 018381 252 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMP 303 (357)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~ 303 (357)
++.+.++|..++.+|+|..|.+..+.++..+|+ +..+...+|.+|.++|.-
T Consensus 430 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~-~~~ar~l~a~~~~~l~~~ 480 (505)
T d2cfua2 430 AERLLEQARASYARGEYRWVVEVVNRLVFAEPD-NRAARELQADALEQLGYQ 480 (505)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHHHh
Confidence 445566677777777777777777777777777 777766666666655443
|