BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018382
(357 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/356 (64%), Positives = 260/356 (73%)
Query: 1 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
MG ++ ER T GWAA+DPSGILSPYTYTLR TG EDV I+++ CGICHTD+HQ KNDLGM
Sbjct: 1 MGIMEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM 60
Query: 61 SNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWS 120
SNYPM S F CC C PCE D+EQYC KKIWS
Sbjct: 61 SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWS 120
Query: 121 YNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS 180
YNDVY +G+PTQGGFA++ VV QKFVVKIP+GMA+EQAAPLLCAGVTV+SPLSHFGLKQ
Sbjct: 121 YNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQP 180
Query: 181 XXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240
AKAMGHHVTVISSS+KKR EA++ LGAD Y++ SD +M E
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSE 240
Query: 241 AADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFI 300
ADSLDY+IDTVP +H LEPY GVIN P+QFLTP++MLGRK ITGSFI
Sbjct: 241 LADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFI 300
Query: 301 GSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 356
GSMKET+EMLEFC+EKG++S+IEV+KMDYVN AFERLEKNDVRYRFVVDV GS LD
Sbjct: 301 GSMKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSNLD 356
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 293 bits (751), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 194/344 (56%)
Query: 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXX 69
GWAA+D SG LSP+ ++ R TG EDV KVLYCG+CH+D+H IKND G S YP+
Sbjct: 17 AFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGH 76
Query: 70 XXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGK 129
C +C C D+E YC K I +Y +Y DG
Sbjct: 77 EIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGT 136
Query: 130 PTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXX 189
T GG++ MV +++++++ PD M L+ APLLCAG+TV+SPL +FGL +
Sbjct: 137 ITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGL 196
Query: 190 XXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYII 249
AKA G VTVIS+S K+ EA+++ GAD +LVS D +MQ AA +LD II
Sbjct: 197 GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGII 256
Query: 250 DTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEM 309
DTV A HPL P G P++ ++ GRK + GS IG MKET+EM
Sbjct: 257 DTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEM 316
Query: 310 LEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 353
++F + +T+ IEVI DY+N A ERL KNDVRYRFV+DV +
Sbjct: 317 IDFAAKHNITADIEVISTDYLNTAMERLAKNDVRYRFVIDVGNT 360
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 178/348 (51%), Gaps = 14/348 (4%)
Query: 8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXX 67
+A ++AK P L P T R G DV I++ YCG+CH+D+HQ++++ + YP
Sbjct: 24 KAVGAYSAKQP---LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 80
Query: 68 XXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTD 127
+ C++C CE +E YC+ +YN D
Sbjct: 81 GHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPD 140
Query: 128 GKP--TQGGFAESMVVDQKFVVKIPDGM-ALEQAAPLLCAGVTVFSPLSHFGLKQSXXXX 184
+P T GG+++ +VV +++V++I L APLLCAG+T +SPL H+
Sbjct: 141 -EPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHW-QAGPGKKV 198
Query: 185 XXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADS 244
A AMG HV ++S+ KR EA + LGAD+ + S +A M S
Sbjct: 199 GVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKS 257
Query: 245 LDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMV---MLGRKAITGSFIG 301
D+I++TV A H L+ + G TP + +P V ++ R+AI GS IG
Sbjct: 258 FDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHK--SPEVFNLIMKRRAIAGSMIG 315
Query: 302 SMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVD 349
+ ET+EML+FC E G+ + IE+I+ D +N+A+ER+ + DV+YRFV+D
Sbjct: 316 GIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVID 363
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 160/347 (46%), Gaps = 12/347 (3%)
Query: 12 GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXX 71
G+A P+ ++ G DV I +LY GICH+DIH ++ YPM
Sbjct: 7 GFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEI 66
Query: 72 XXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYN--DVYTDGK 129
F C+ C+PC+ EQ+C K +++Y+ D + D +
Sbjct: 67 AGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNE 126
Query: 130 PTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXX 189
P GG++ ++VVD+ +V+ + LE+ APLLCAG+T +SPL F
Sbjct: 127 PHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGF 185
Query: 190 XXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYII 249
A AMG V+V + ++ K+ +A+ +G + T ++ + LD+II
Sbjct: 186 GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHFY-----TDPKQCKEELDFII 239
Query: 250 DTVPANHPLEPYXXXXXXXXXXXXTG---VINTPMQFLTPMVMLGRKAITGSFIGSMKET 306
T+P ++ L+ Y G V P+ + + LG + + GS IG +KET
Sbjct: 240 STIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKET 299
Query: 307 KEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 353
+EM++F + + I++I ++ A+ L ++R+V+D+ S
Sbjct: 300 QEMVDFSIKHNIYPEIDLILGKDIDTAYHNLTHGKAKFRYVIDMKKS 346
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 145/320 (45%), Gaps = 10/320 (3%)
Query: 36 DVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXX-XXXSNFXXXXXXXXX 94
D+ IK+ CG+C +DIH G P+ S
Sbjct: 35 DIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVG 94
Query: 95 XXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA 154
C C C+ D E YC K + +Y+ Y DG +QGG+A + V + FVV IP+ +
Sbjct: 95 AQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIP 154
Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSD 214
AAPLLC G+TV+SPL G +KAMG VIS S
Sbjct: 155 SHLAAPLLCGGLTVYSPLVRNGCGPG-KKVGIVGLGGIGSMGTLISKAMGAETYVISRSS 213
Query: 215 KKRVEAMEHLGADQYLVSSDATRMQEAA-DSLDYIIDTVPANHPLEPYXXXXXXXXXXXX 273
+KR +AM+ +GAD Y+ + + E D+ D I+ + ++ +
Sbjct: 214 RKREDAMK-MGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDID-FNIMPKAMKVGGR 271
Query: 274 TGVINTPMQF-LTPMVMLGRKAITGSF--IGSMKETKEMLEFCREKGVTSMIEVIKMDY- 329
I+ P Q + + G KA++ S+ +GS+KE ++L+ EK + +E + +
Sbjct: 272 IVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIKIWVETLPVGEA 331
Query: 330 -VNKAFERLEKNDVRYRFVV 348
V++AFER+EK DVRYRF +
Sbjct: 332 GVHEAFERMEKGDVRYRFTL 351
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 128/317 (40%), Gaps = 13/317 (4%)
Query: 36 DVYIKVLYCGICHTDIHQIKNDLGMS-NYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXX 94
+V +++ CG+CHTD+H D + P+ ++
Sbjct: 27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIP 86
Query: 95 XXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA 154
C +C C + E C + G GG+AE +VVKIPD ++
Sbjct: 87 WLYSACGHCDYCLSGQETLCEHQ-------KNAGYSVDGGYAEYCRAAADYVVKIPDNLS 139
Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSD 214
E+AAP+ CAGVT + L G K AKAMG +V + D
Sbjct: 140 FEEAAPIFCAGVTTYKALKVTGAKPG-EWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGD 198
Query: 215 KKRVEAMEHLGADQYL--VSSDATR-MQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXX 271
+K +E + LGAD + + DA + M+E + + T + +
Sbjct: 199 EK-LELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 257
Query: 272 XXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVN 331
G+ M +L I GS +G+ K+ +E L+F E V ++IEV ++ +N
Sbjct: 258 VLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQPLEKIN 317
Query: 332 KAFERLEKNDVRYRFVV 348
+ F+R+ K + R V+
Sbjct: 318 EVFDRMLKGQINGRVVL 334
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 128/317 (40%), Gaps = 13/317 (4%)
Query: 36 DVYIKVLYCGICHTDIHQIKNDLGMS-NYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXX 94
+V +++ CG+CHTD+H D + P+ ++
Sbjct: 27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIP 86
Query: 95 XXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA 154
C +C C + E C + G GG+AE +VVKIPD ++
Sbjct: 87 WLYSACGHCDYCLSGQETLCEHQ-------KNAGYSVDGGYAEYCRAAADYVVKIPDNLS 139
Query: 155 LEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSD 214
E+AAP+ CAGVT + L G K AKAMG +V + D
Sbjct: 140 FEEAAPIFCAGVTTYKALKVTGAKPG-EWVAIYGIGGFGHVAVQYAKAMGLNVVAVDIGD 198
Query: 215 KKRVEAMEHLGADQYL--VSSDATR-MQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXX 271
+K +E + LGAD + + DA + M+E + + T + +
Sbjct: 199 EK-LELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 257
Query: 272 XXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVN 331
G+ M +L I GS +G+ K+ +E L+F E V ++IEV ++ +N
Sbjct: 258 VLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQPLEKIN 317
Query: 332 KAFERLEKNDVRYRFVV 348
+ F+R+ K + R V+
Sbjct: 318 EVFDRMLKGQINGRVVL 334
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 118/327 (36%), Gaps = 25/327 (7%)
Query: 33 GAEDVYIKVLYCGICHTDIHQIKNDLGMS-NYPMXXXXXXXXXXXXXXXXXSNFXXXXXX 91
G V +K+ G+CHTD+H D + P S
Sbjct: 26 GPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRV 85
Query: 92 XXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
C C C E C K+ G GG+ E +V D +V +PD
Sbjct: 86 GVPWLYSACGYCEHCLQGWETLCEKQ-------QNTGYSVNGGYGEYVVADPNYVGLLPD 138
Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLK----QSXXXXXXXXXXXXXXXXXXXAKAMGHHV 207
+ + AP+LCAGVTV+ GLK + A+AMG V
Sbjct: 139 KVGFVEIAPILCAGVTVYK-----GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRV 193
Query: 208 TVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADSLDYIIDTVPANHPLEPYXXX 264
+ D K + LGA+ + + D A +Q+ ++ T +
Sbjct: 194 AAVDIDDAK-LNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGM 252
Query: 265 XXXXXXXXXTGVINTPMQFLTPM--VMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI 322
G+ P F TP+ V+L I GS +G+ + +E L+F V + +
Sbjct: 253 VRRGGTIALNGL--PPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKATV 310
Query: 323 EVIKMDYVNKAFERLEKNDVRYRFVVD 349
K+D VN F RL + V R V+D
Sbjct: 311 STAKLDDVNDVFGRLREGKVEGRVVLD 337
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 117/338 (34%), Gaps = 14/338 (4%)
Query: 17 DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXX 76
+P G LR + + + YCG+CHTD+H D G +
Sbjct: 9 NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG-NKAGTVLGHEGIGIVK 67
Query: 77 XXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFA 136
S+ C +C C + E +C +V G GG A
Sbjct: 68 EIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCR-------EVKNAGYSVDGGMA 120
Query: 137 ESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXX 196
E +V + VK+PDG+ +A+ + CAGVT + + G+K
Sbjct: 121 EEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAI 180
Query: 197 XXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE-----AADSLDYIIDT 251
G V + ++ ++ + +GAD + S D + E + I
Sbjct: 181 QYAKNVFGAKVIAV-DINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVC 239
Query: 252 VPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLE 311
A E V NT M P V+ + GS +G+ + E +
Sbjct: 240 AVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQ 299
Query: 312 FCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVD 349
F E V ++ K++ +N + ++ + R V+D
Sbjct: 300 FGAEGKVKPIVATRKLEEINDIIDEMKAGKIEGRMVID 337
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 117/338 (34%), Gaps = 14/338 (4%)
Query: 17 DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXX 76
+P G LR + + + YCG+CHTD+H D G +
Sbjct: 9 NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDYG-NKAGTVLGHEGIGIVK 67
Query: 77 XXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFA 136
S+ C +C C + E +C +V G GG A
Sbjct: 68 EIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCR-------EVKNAGYSVDGGMA 120
Query: 137 ESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXX 196
E +V + VK+PDG+ +A+ + CAGVT + + G+K
Sbjct: 121 EEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAI 180
Query: 197 XXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE-----AADSLDYIIDT 251
G V + ++ ++ + +GAD + S D + E + I
Sbjct: 181 QYAKNVFGAKVIAV-DINQDKLNLAKKIGADVIINSGDVNPVDEIKKITGGLGVQSAIVC 239
Query: 252 VPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLE 311
A E + NT M P V+ + GS +G+ + E +
Sbjct: 240 AVARIAFEQAVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQ 299
Query: 312 FCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVD 349
F E V ++ K++ +N + ++ + R V+D
Sbjct: 300 FGAEGKVKPIVATRKLEEINDIIDEMKAGKIEGRMVID 337
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 123/337 (36%), Gaps = 39/337 (11%)
Query: 34 AEDVYIKVLYCGICHTDIHQIKNDLGMS-NYPMXXXXXXXXXXXXXXXXXSNFXXXXXXX 92
A ++ I V Y G+CHTD+H D + P+ +
Sbjct: 30 ANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAG 89
Query: 93 XXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG 152
C C CE E C + D+ G G F + D IP G
Sbjct: 90 IKWLNGSCMACEYCELGNESNC-----PHADL--SGYTHDGSFQQYATADAVQAAHIPQG 142
Query: 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISS 212
L Q AP+LCAG+TV+ L L AKAMG+ V I
Sbjct: 143 TDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDG 202
Query: 213 SDKKRVEAMEHLGADQYLVSSDATRMQEAADSL--------DYIIDTVPANHPLEPYXXX 264
+ K E +G + ++ D T+ ++ ++ +I+ + +E
Sbjct: 203 GEGKE-ELFRSIGGEVFI---DFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRY 258
Query: 265 XXXXXXXXXTG----------VINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCR 314
G V N ++ ++ I GS++G+ +T+E L+F
Sbjct: 259 VRANGTTVLVGMPAGAKCCSDVFNQVVKSIS---------IVGSYVGNRADTREALDFFA 309
Query: 315 EKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVA 351
V S I+V+ + + + +E++EK + R+VVD +
Sbjct: 310 RGLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTS 346
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 123/324 (37%), Gaps = 15/324 (4%)
Query: 33 GAEDVYIKVLYCGICHTDIHQIKNDLGMS-NYPMXXXXXXXXXXXXXXXXXSNFXXXXXX 91
G + + + G+CHTD+H + D + N P +
Sbjct: 49 GPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEGDRV 108
Query: 92 XXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
C +CR C E C +++ G GGFAE +V D FV +P
Sbjct: 109 GIPWLYTACGHCRHCLGGWETLCEEQL-------NTGYSVNGGFAEYVVADPNFVGHLPK 161
Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVIS 211
+ + AP+LCAGVTV+ L K A+AMG +V +
Sbjct: 162 NIDFNEIAPVLCAGVTVYKGLKVTDTKPG-DWVVISGIGGLGHMAVQYARAMGLNVAAVD 220
Query: 212 SSDKKRVEAMEHLGA----DQYLVSSDATRMQEAAD-SLDYIIDTVPANHPLEPYXXXXX 266
D+K ++ LGA + V+ A +++ D ++ T + E
Sbjct: 221 IDDRK-LDLARRLGATVTVNAKTVADPAAYIRKETDGGAQGVLVTAVSPKAFEQALGMVA 279
Query: 267 XXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIK 326
G+ ++L + GS +G+ + +E L+F + V + I+ K
Sbjct: 280 RGGTVSLNGLPPGDFPLSIFNMVLNGVTVRGSIVGTRLDLQESLDFAADGKVKATIQTGK 339
Query: 327 MDYVNKAFERLEKNDVRYRFVVDV 350
++ +N F+ + + ++ R V+D+
Sbjct: 340 LEDINAIFDDMRQGNIEGRIVMDL 363
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 120/328 (36%), Gaps = 25/328 (7%)
Query: 33 GAEDVYIKVLYCGICHTDIHQIKNDLGMSN-YPMXXXXXXXXXXXXXXXXXSNFXXXXXX 91
G V +K+ G+CHTD+H + D + P +
Sbjct: 30 GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRV 89
Query: 92 XXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD 151
C C C E C + G GG+AE ++ D +V +P
Sbjct: 90 GIPWLYTACGCCEHCLTGWETLCESQ-------QNTGYSVNGGYAEYVLADPNYVGILPK 142
Query: 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSXXX----XXXXXXXXXXXXXXXXAKAMGHHV 207
+ + AP+LCAGVTV+ GLKQ+ A+AMG HV
Sbjct: 143 NVEFAEIAPILCAGVTVYK-----GLKQTNARPGQWVAISGIGGLGHVAVQYARAMGLHV 197
Query: 208 TVISSSDKKRVEAMEHLGADQYLVSSD---ATRMQEAADSLDYIIDTVPANHPLEPYXXX 264
I D K +E LGA + + +Q ++ T +N
Sbjct: 198 AAIDIDDAK-LELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGM 256
Query: 265 XXXXXXXXXTGVINTPMQFLTPM--VMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI 322
G+ P F TP+ V+L I GS +G+ + +E L+F E V + I
Sbjct: 257 ARRGGTIALVGL--PPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEGLVKATI 314
Query: 323 EVIKMDYVNKAFERLEKNDVRYRFVVDV 350
K+D +N+ +++ + R V+++
Sbjct: 315 HPGKLDDINQILDQMRAGQIEGRIVLEM 342
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 117/319 (36%), Gaps = 28/319 (8%)
Query: 37 VYIKVLYCGICHTDIH---------QIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXX 87
V IKV G+CH+D+H +I DLG+ P+ +
Sbjct: 28 VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGV-KLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88 XXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFV 146
NC C E C+ W G G +AE ++V K++
Sbjct: 87 GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYM 138
Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHH 206
K+ A+E AAPL C+G+T + + L + AKA+
Sbjct: 139 YKLRRLNAVE-AAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA 197
Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSS------DATRMQEAADSLDYIIDTVPANHPLEP 260
+ ++ VEA + GAD + +S + R+ E+ +D +ID + L
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES-KGVDAVIDLNNSEKTLSV 256
Query: 261 YXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320
Y G+ + + P++ L GS +G+ + ++ V
Sbjct: 257 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKP 316
Query: 321 MI-EVIKMDYVNKAFERLE 338
MI + +K++ N+A + LE
Sbjct: 317 MITKTMKLEEANEAIDNLE 335
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 117/319 (36%), Gaps = 28/319 (8%)
Query: 37 VYIKVLYCGICHTDIH---------QIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXX 87
V IKV G+CH+D+H +I DLG+ P+ +
Sbjct: 28 VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGV-KLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88 XXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFV 146
NC C E C+ W G G +AE ++V K++
Sbjct: 87 GDLVAVNPLQGEG-NCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYM 138
Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHH 206
K+ A+E AAPL C+G+T + + L + AKA+
Sbjct: 139 YKLRRLNAVE-AAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA 197
Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSS------DATRMQEAADSLDYIIDTVPANHPLEP 260
+ ++ VEA + GAD + +S + R+ E+ +D +ID + L
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES-KGVDAVIDLNYSEKTLSV 256
Query: 261 YXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320
Y G+ + + P++ L GS +G+ + ++ V
Sbjct: 257 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKP 316
Query: 321 MI-EVIKMDYVNKAFERLE 338
MI + +K++ N+A + LE
Sbjct: 317 MITKTMKLEEANEAIDNLE 335
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 117/319 (36%), Gaps = 28/319 (8%)
Query: 37 VYIKVLYCGICHTDIH---------QIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXX 87
V IKV G+CH+D+H +I DLG+ P+ +
Sbjct: 28 VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGV-KLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88 XXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFV 146
NC C E C+ W G G +AE ++V K++
Sbjct: 87 GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYM 138
Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHH 206
K+ A+E AAPL C+G+T + + L + AKA+
Sbjct: 139 YKLRRLNAVE-AAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA 197
Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSS------DATRMQEAADSLDYIIDTVPANHPLEP 260
+ ++ VEA + GAD + +S + R+ E+ +D +ID + L
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES-KGVDAVIDLNYSEKTLSV 256
Query: 261 YXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320
Y G+ + + P++ L GS +G+ + ++ V
Sbjct: 257 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKP 316
Query: 321 MI-EVIKMDYVNKAFERLE 338
MI + +K++ N+A + LE
Sbjct: 317 MITKTMKLEEANEAIDNLE 335
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 114/318 (35%), Gaps = 26/318 (8%)
Query: 37 VYIKVLYCGICHTDIH---------QIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXX 87
V IK+ G+CH+D+H +I DLG+ P+ +
Sbjct: 28 VLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGV-KLPVTLGHEIAGRIEEVGDEVVGYSK 86
Query: 88 XXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFV 146
NC C E C+ W G G +AE ++V K++
Sbjct: 87 GDLVAVNPWEGEG-NCYYCRIGEEHLCDSPRWL-------GINYDGAYAEYVLVPHYKYL 138
Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHH 206
K+ A+E AAPL C+GVT + + L S AKA+
Sbjct: 139 YKLRRLSAVE-AAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVSGA 197
Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE-----AADSLDYIIDTVPANHPLEPY 261
+ ++ +EA + GAD + +S + E D +ID + L Y
Sbjct: 198 TIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQGKGADAVIDLNNSEKTLSIY 257
Query: 262 XXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSM 321
G+ +++ P++ L GS +G+ + ++ V M
Sbjct: 258 PYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQSDFLGIMSLAEAGKVKPM 317
Query: 322 I-EVIKMDYVNKAFERLE 338
+ + +K++ N+A + LE
Sbjct: 318 VTKTMKLEEANEAIDNLE 335
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 115/319 (36%), Gaps = 28/319 (8%)
Query: 37 VYIKVLYCGICHTDIH---------QIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXX 87
V IKV G+CH+D+H +I DLG+ P+ +
Sbjct: 28 VLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGV-KLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88 XXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFV 146
NC C E C+ W G G +AE ++V K+
Sbjct: 87 GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYX 138
Query: 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHH 206
K+ A+E AAPL C+G+T + + L + AKA+
Sbjct: 139 YKLRRLNAVE-AAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVSGA 197
Query: 207 VTVISSSDKKRVEAMEHLGADQYLVSS------DATRMQEAADSLDYIIDTVPANHPLEP 260
+ ++ VEA + GAD + +S + R+ E+ +D +ID + L
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES-KGVDAVIDLNNSEKTLSV 256
Query: 261 YXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320
Y G+ + + P++ L GS +G+ + + V
Sbjct: 257 YPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIXRLAEAGKVKP 316
Query: 321 MI-EVIKMDYVNKAFERLE 338
I + K++ N+A + LE
Sbjct: 317 XITKTXKLEEANEAIDNLE 335
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 122/334 (36%), Gaps = 28/334 (8%)
Query: 30 RNTGAEDVYIKVLYCGICHTDIHQIK---NDLGMSNYPMXXXXXXXXXXXXXXXXXSNFX 86
R G DV +++ G+CHTD+H ++ ++L P
Sbjct: 37 RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 96
Query: 87 XXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFV 146
C C A + +C ++ G GGFAE M + V
Sbjct: 97 KGDPVILHPAVTDG-TCLACRAGEDMHCE-------NLEFPGLNIDGGFAEFMRTSHRSV 148
Query: 147 VKIPDGMALE---QAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAM 203
+K+P ++ E + APL AG+T + + +
Sbjct: 149 IKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKV 208
Query: 204 GHHVTVISSSDKK-RVEAMEHLGADQYLVSS--------DATRMQEAADSLDYIIDTVPA 254
TVI+ K+ +++ E LGAD + + + TR + ++D++
Sbjct: 209 MTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATV 268
Query: 255 NHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCR 314
++ PY G ++F T V+ + GS +G+ E E++
Sbjct: 269 DYT--PYLLGRMGRLIIVGYG---GELRFPTIRVISSEVSFEGSLVGNYVELHELVTLAL 323
Query: 315 EKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVV 348
+ V +++ K+D +N ERLEK +V R V+
Sbjct: 324 QGKVRVEVDIHKLDEINDVLERLEKGEVLGRAVL 357
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 113/329 (34%), Gaps = 22/329 (6%)
Query: 33 GAEDVYIKVLYCGICHTDIHQIKNDLGMSNY----PMXXXXXXXXXXXXXXXXXSNFXXX 88
G ++ +KV G+CH+DI + D+ + Y P+ + F
Sbjct: 24 GPGEILLKVTAAGLCHSDIFVM--DMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVG 81
Query: 89 XXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFVV 147
C C C E YC + + + G + G AE M+VD + +V
Sbjct: 82 DAVAVYGPWGCG-ACHACARGRENYCTRA--ADLGITPPGLGSPGSMAEYMIVDSARHLV 138
Query: 148 KIPDGMALEQAAPLLCAGVTVFSPLSH-FGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHH 206
I D + AAPL AG+T + +S L +A+
Sbjct: 139 PIGD-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAA 197
Query: 207 VTVISSSDKKRVEAMEHLGADQYLVS----SDATRMQEAADSLDYIIDTVPANHPLEPYX 262
+ D R+ +GAD + S +DA R + D V A ++
Sbjct: 198 RVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQ 257
Query: 263 XXXXXXXXXXXTGV---INTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT 319
G+ + + F M+ G +T + G+ E E++ R +
Sbjct: 258 QVVAVDGHISVVGIHAGAHAKVGFF--MIPFGASVVT-PYWGTRSELMEVVALARAGRLD 314
Query: 320 SMIEVIKMDYVNKAFERLEKNDVRYRFVV 348
E +D A+ RL + +R R VV
Sbjct: 315 IHTETFTLDEGPAAYRRLREGSIRGRGVV 343
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 104/258 (40%), Gaps = 21/258 (8%)
Query: 100 CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVV-DQKFVVKIPDGMALEQA 158
CR CR + ++ C +I G+ T GGF+E M+V +++VK+ + ++ +A
Sbjct: 97 CRYCREGKFNI---CKNQI-------IPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEA 145
Query: 159 APLLCAGVTVFSPLSH---FGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTV--ISSS 213
APL AG T + F K + KA+ ++T+ IS S
Sbjct: 146 APLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRS 205
Query: 214 DKKRVEAMEHLGADQYLVSSDA-TRMQEAADSL--DYIIDTVPANHPLEPYXXXXXXXXX 270
K R A+E LGAD DA + + + D L ID V
Sbjct: 206 KKHRDFALE-LGADYVSEMKDAESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGA 264
Query: 271 XXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYV 330
G+ + + K + GS GS+ + ++++ + I + +D +
Sbjct: 265 IILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKPYIIKVPLDDI 324
Query: 331 NKAFERLEKNDVRYRFVV 348
NKAF L++ V R V+
Sbjct: 325 NKAFTNLDEGRVDGRQVI 342
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 124 VYTDGKPTQGGF-AESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH-FGLKQSX 181
VY G P Q G AE +++++ V K P ++ EQA L G+T + L FG+ ++
Sbjct: 87 VYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNR 146
Query: 182 XXXXXXXXXXXX------XXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA 235
AKA G V + ++S + +E + +GAD L ++
Sbjct: 147 NENEGKTLLIINGAGGVGSIATQIAKAYGLRV-ITTASRNETIEWTKKMGADIVLNHKES 205
Query: 236 TRMQ---EAADSLDYI 248
Q + + +DY+
Sbjct: 206 LLNQFKTQGIELVDYV 221
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 77/243 (31%), Gaps = 18/243 (7%)
Query: 8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXX 67
+A + W K P S + ++V IK+L GIC TD H IK + +S +P+
Sbjct: 10 KAAVLWEQKQP---FSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTM-VSKFPVIV 65
Query: 68 XXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTD 127
+ CR C C C + + V D
Sbjct: 66 GHEATGIVESIGEGVTTVKPGDKVIPLFLPQ-CRECNACRNPDGNLCIRSDITGRGVLAD 124
Query: 128 --------GKPTQ-----GGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH 174
GKP F E VVD+ V KI D E+ + C T +
Sbjct: 125 GTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVK 184
Query: 175 FGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD 234
G + K+ G + +K + E +GA + + D
Sbjct: 185 TGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKD 244
Query: 235 ATR 237
+T+
Sbjct: 245 STK 247
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 77/243 (31%), Gaps = 18/243 (7%)
Query: 8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXX 67
+A + W K P S + ++V IK+L GIC TD H IK + +S +P+
Sbjct: 10 KAAVLWEQKQP---FSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTM-VSKFPVIV 65
Query: 68 XXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTD 127
+ CR C C C + + V D
Sbjct: 66 GHEATGIVESIGEGVTTVKPGDKVIPLFLPQ-CRECNACRNPDGNLCIRSDITGRGVLAD 124
Query: 128 --------GKPTQ-----GGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH 174
GKP F E VVD+ V KI D E+ + C T +
Sbjct: 125 GTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVK 184
Query: 175 FGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD 234
G + K+ G + +K + E +GA + + D
Sbjct: 185 TGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKD 244
Query: 235 ATR 237
+T+
Sbjct: 245 STK 247
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 19/145 (13%)
Query: 36 DVYIKVLYCGICHTDIHQIKND-------LGMSNYPMXXXXXXXXXXXXXXXXXSNFXXX 88
++ IKV CGIC +D+H + D G++ +P+ N
Sbjct: 57 EIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTN 116
Query: 89 XXXXX-----XXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ 143
C +CRPC +C + N++ G G FAE + VD
Sbjct: 117 KRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCE----NLNEL---GFNVDGAFAEYVKVDA 169
Query: 144 KFVVKIPDGMALEQAAPLLCAGVTV 168
K+ + + + + L AG V
Sbjct: 170 KYAWSLRELEGVYEGDRLFLAGSLV 194
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 132 QGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXX 191
QGG AE + V + ++ +P+G++ E+AA + +T + L +
Sbjct: 78 QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGA 137
Query: 192 XXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDT 251
A+AMG V +S +K + LGA++ ++ +A LD +++
Sbjct: 138 LGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEVPERAKAWGGLDLVLEV 196
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 132 QGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXX 191
QGG AE + V + ++ +P+G++ E+AA + +T + L +
Sbjct: 78 QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGA 137
Query: 192 XXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDT 251
A+AMG V +S +K + LGA++ ++ +A LD +++
Sbjct: 138 LGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEVPERAKAWGGLDLVLEV 196
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Query: 119 WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLK 178
W D P GG A+ + V + ++ IP+G+ L QAA + A +T F L G
Sbjct: 102 WKIGDTAMALLPG-GGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNV 160
Query: 179 QSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGA 226
Q+ M + ++++ +K+++ E LGA
Sbjct: 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGA 208
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Query: 119 WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLK 178
W D P GG A+ + V + ++ IP+G+ L QAA + A +T F L G
Sbjct: 86 WKIGDTAMALLPG-GGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNV 144
Query: 179 QSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGA 226
Q+ M + ++++ +K+++ E LGA
Sbjct: 145 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGA 192
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 48/133 (36%), Gaps = 13/133 (9%)
Query: 20 GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXX 79
G +S + G +D+ +KV CGIC TD H + + S P+
Sbjct: 33 GNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF-PSTPPVTLGHEFCGIVVEAG 91
Query: 80 XXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCN--KKIWSYNDVYTDGKPTQGGFAE 137
+ C R C C+A C + I + D GGFAE
Sbjct: 92 SAVRDIAPGARITGDPNISCGR-CPQCQAGRVNLCRNLRAIGIHRD---------GGFAE 141
Query: 138 SMVVDQKFVVKIP 150
++V +K +IP
Sbjct: 142 YVLVPRKQAFEIP 154
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Query: 132 QGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXX 191
QGG AE + V + ++ +P+G++ E+AA + +T + L +
Sbjct: 78 QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGA 137
Query: 192 XXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDT 251
A+A G V +S +K + LGA++ ++ +A LD +++
Sbjct: 138 LGTAAVQVARAXGLRVLAAASRPEKLALPL-ALGAEEAATYAEVPERAKAWGGLDLVLEV 196
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 130 PTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT 167
P QG F++ V + KIP G++ EQAA L AG++
Sbjct: 102 PDQGAFSQYTVTRGRVWAKIPKGLSFEQAA-ALPAGIS 138
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 130 PTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT 167
P QG F++ V + KIP G++ EQAA L AG++
Sbjct: 102 PDQGAFSQYTVTRGRVWAKIPKGLSFEQAA-ALPAGIS 138
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 2/118 (1%)
Query: 135 FAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXX 194
+AE + +++ + ++ QAA L AG+T L+ +KQ
Sbjct: 108 YAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGH 167
Query: 195 XXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTV 252
AK G TVI+++ K+ ++ LGA+Q + + + + +D +ID V
Sbjct: 168 LAIQLAKQKG--TTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLV 223
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 60/171 (35%), Gaps = 19/171 (11%)
Query: 8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXX 67
+A + W K P S + A +V IK++ GICHTD H + +L ++ P+
Sbjct: 10 KAAVLWEVKKP---FSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNL-VTPLPVIL 65
Query: 68 XXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKK-IWSYNDVYT 126
+ C + CR C+ YC K + +
Sbjct: 66 GHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGK-CRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 127 D--------GKPTQ-----GGFAESMVVDQKFVVKIPDGMALEQAAPLLCA 164
D GKP F++ VVD+ V KI LE+ + C
Sbjct: 125 DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCG 175
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 132 QGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ 179
G FAE V++ V +PD ++ E+AA L C +T + L +
Sbjct: 95 HGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLTK 142
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 133 GGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV 168
G ++E V+ + +VK+ D ++ EQAA L+ G+TV
Sbjct: 93 GAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTV 128
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 43/125 (34%), Gaps = 8/125 (6%)
Query: 34 AEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXX 93
A +V +KV GIC +D H + + YP +
Sbjct: 44 AGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVES-ARVGERVA 102
Query: 94 XXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGM 153
C +C PC C + V+ D GGF+E VV K KIP+ +
Sbjct: 103 VDPVVSCGHCYPCSIGKPNVCTT--LAVLGVHAD-----GGFSEYAVVPAKNAWKIPEAV 155
Query: 154 ALEQA 158
A + A
Sbjct: 156 ADQYA 160
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex:
Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase
(Adh8) With The Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex:
Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase
(Adh8) With The Cofactor Nadp
Length = 373
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 6 TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM 65
T +A + W P LS T T+ A +V IK+L GIC +D +K ++ S +P+
Sbjct: 9 TCKAAVAWEPHKP---LSLETITVAPPKAHEVRIKILASGICGSDSSVLK-EIIPSKFPV 64
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 9/125 (7%)
Query: 35 EDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXX 94
++V +K+ G+C +D+ +I + G YP+ +
Sbjct: 26 DEVRVKIASSGLCGSDLPRIFKN-GAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACV 84
Query: 95 XXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMA 154
C C C C K Y+ + G GGFAE +VV +K V +P M
Sbjct: 85 PLLPCF-TCPECLKGFYSQCAK----YDFI---GSRRDGGFAEYIVVKRKNVFALPTDMP 136
Query: 155 LEQAA 159
+E A
Sbjct: 137 IEDGA 141
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme)
Complexed With Nicotinamide Adenine Dinucleotide (Nad),
And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme)
Complexed With Nicotinamide Adenine Dinucleotide (Nad),
And Zinc
Length = 374
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 1 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM 60
+G + +A + W A P L + A ++ IK++ G+CHTD++ +
Sbjct: 3 VGKVIKCKAAVAWEANKP---LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK 59
Query: 61 SNYPM 65
+P+
Sbjct: 60 DGFPV 64
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 9/136 (6%)
Query: 100 CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAA 159
CR C+ C+ C + P G A V F K+PD ++LE+ A
Sbjct: 96 CRRCQFCKEGKYNLCPDLTFCAT------PPDDGNLARYYVHAADFCHKLPDNVSLEEGA 149
Query: 160 PLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVE 219
L V V + G+ Q AKA G V V ++ +R+E
Sbjct: 150 LLEPLSVGVHA-CRRAGV-QLGTTVLVIGAGPIGLVSVLAAKAYGAFV-VCTARSPRRLE 206
Query: 220 AMEHLGADQYLVSSDA 235
++ GAD LV A
Sbjct: 207 VAKNCGADVTLVVDPA 222
>pdb|4FCZ|B Chain B, Crystal Structure Of Toluene-tolerance Protein From
Pseudomonas Putida (strain Kt2440), Northeast Structural
Genomics Consortium (nesg) Target Ppr99
pdb|4FCZ|A Chain A, Crystal Structure Of Toluene-tolerance Protein From
Pseudomonas Putida (strain Kt2440), Northeast Structural
Genomics Consortium (nesg) Target Ppr99
Length = 223
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 5 DTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGI 46
D +RA++G +G + P YTL N G E V+ GI
Sbjct: 126 DGKRASVGXKVTGNNGAVYPVQYTLENIGGEWKVRNVIVNGI 167
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 28.5 bits (62), Expect = 5.6, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 284 LTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVI---KMDYVNKAFERLEKN 340
LTP + +GR + + +TKE +F E + E + + VNKA ++ ++
Sbjct: 402 LTPRIKVGRDVVQKA------QTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQ 455
Query: 341 DVRYRFVVDVAG 352
+ ++D+AG
Sbjct: 456 GASFLGILDIAG 467
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 2 GSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIH 52
G + T +A + W P L + A +V +KVLY +CHTD +
Sbjct: 22 GQVITCKAAVAWEPNKP---LVIEDVQVAPPQAGEVRVKVLYTALCHTDAY 69
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 284 LTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVI---KMDYVNKAFERLEKN 340
LTP + +GR + + +TKE +F E + E + + VNKA ++ ++
Sbjct: 402 LTPRIKVGRDVVQKA------QTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQ 455
Query: 341 DVRYRFVVDVAG 352
+ ++D+AG
Sbjct: 456 GASFLGILDIAG 467
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 284 LTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVI---KMDYVNKAFERLEKN 340
LTP + +GR + + +TKE +F E + E + + VNKA ++ ++
Sbjct: 402 LTPRIKVGRDVVQKA------QTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQ 455
Query: 341 DVRYRFVVDVAG 352
+ ++D+AG
Sbjct: 456 GASFLGILDIAG 467
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 284 LTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVI---KMDYVNKAFERLEKN 340
LTP + +GR + + +TKE +F E + E + + VNKA ++ ++
Sbjct: 402 LTPRIKVGRDVVQKA------QTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQ 455
Query: 341 DVRYRFVVDVAG 352
+ ++D+AG
Sbjct: 456 GASFLGILDIAG 467
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 284 LTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVI---KMDYVNKAFERLEKN 340
LTP + +GR + + +TKE +F E + E + + VNKA ++ ++
Sbjct: 402 LTPRIKVGRDVVQKA------QTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQ 455
Query: 341 DVRYRFVVDVAG 352
+ ++D+AG
Sbjct: 456 GASFLGILDIAG 467
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 284 LTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVI---KMDYVNKAFERLEKN 340
LTP + +GR + + +TKE +F E + E + + VNKA ++ ++
Sbjct: 402 LTPRIKVGRDVVQKA------QTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQ 455
Query: 341 DVRYRFVVDVAG 352
+ ++D+AG
Sbjct: 456 GASFLGILDIAG 467
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,681,044
Number of Sequences: 62578
Number of extensions: 297654
Number of successful extensions: 970
Number of sequences better than 100.0: 53
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 886
Number of HSP's gapped (non-prelim): 71
length of query: 357
length of database: 14,973,337
effective HSP length: 100
effective length of query: 257
effective length of database: 8,715,537
effective search space: 2239893009
effective search space used: 2239893009
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)