Query 018382
Match_columns 357
No_of_seqs 126 out of 1462
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 08:33:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018382.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018382hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 9.9E-68 2.1E-72 469.8 32.3 335 7-351 1-338 (339)
2 KOG0023 Alcohol dehydrogenase, 100.0 3.1E-64 6.8E-69 432.4 31.7 353 1-354 1-358 (360)
3 PLN02586 probable cinnamyl alc 100.0 1.2E-55 2.6E-60 410.8 35.5 347 6-352 9-355 (360)
4 KOG0024 Sorbitol dehydrogenase 100.0 2.7E-56 5.9E-61 384.5 26.8 333 8-351 3-353 (354)
5 COG1062 AdhC Zn-dependent alco 100.0 3.9E-56 8.5E-61 386.9 27.4 337 8-349 1-365 (366)
6 PLN02514 cinnamyl-alcohol dehy 100.0 3.2E-54 7E-59 401.1 36.2 357 1-357 1-357 (357)
7 PLN02178 cinnamyl-alcohol dehy 100.0 5.6E-54 1.2E-58 400.9 36.3 345 7-352 4-350 (375)
8 KOG0022 Alcohol dehydrogenase, 100.0 4.4E-52 9.6E-57 355.7 28.0 341 6-350 4-375 (375)
9 PRK09880 L-idonate 5-dehydroge 100.0 8.9E-51 1.9E-55 376.4 31.7 333 7-350 2-343 (343)
10 TIGR02822 adh_fam_2 zinc-bindi 100.0 2E-50 4.4E-55 371.4 32.7 315 20-348 13-328 (329)
11 COG0604 Qor NADPH:quinone redu 100.0 8.9E-51 1.9E-55 370.1 29.0 308 9-350 2-326 (326)
12 cd08239 THR_DH_like L-threonin 100.0 4.8E-50 1E-54 371.2 32.6 329 10-350 1-339 (339)
13 cd08281 liver_ADH_like1 Zinc-d 100.0 5.9E-50 1.3E-54 374.7 33.2 327 19-348 18-371 (371)
14 PLN02740 Alcohol dehydrogenase 100.0 1.8E-49 4E-54 372.4 33.3 342 5-350 6-381 (381)
15 TIGR03451 mycoS_dep_FDH mycoth 100.0 2.3E-49 4.9E-54 369.1 33.1 337 9-349 1-357 (358)
16 PLN02827 Alcohol dehydrogenase 100.0 2.5E-49 5.4E-54 370.5 33.4 340 6-351 9-377 (378)
17 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.2E-48 2.7E-53 365.1 32.9 337 10-350 2-368 (368)
18 cd08301 alcohol_DH_plants Plan 100.0 2.7E-48 5.9E-53 363.4 32.8 336 9-348 2-368 (369)
19 cd08277 liver_alcohol_DH_like 100.0 4.5E-48 9.8E-53 361.2 34.0 337 8-349 1-365 (365)
20 cd08300 alcohol_DH_class_III c 100.0 9.6E-48 2.1E-52 359.4 33.3 337 9-349 2-368 (368)
21 TIGR03201 dearomat_had 6-hydro 100.0 6.9E-48 1.5E-52 357.9 31.9 321 19-350 8-349 (349)
22 COG1063 Tdh Threonine dehydrog 100.0 5.5E-48 1.2E-52 356.2 30.3 334 12-350 3-350 (350)
23 cd08230 glucose_DH Glucose deh 100.0 6.5E-48 1.4E-52 359.0 30.6 328 11-350 2-355 (355)
24 cd08296 CAD_like Cinnamyl alco 100.0 5.6E-47 1.2E-51 349.8 34.1 331 10-349 1-333 (333)
25 KOG1197 Predicted quinone oxid 100.0 5.7E-48 1.2E-52 320.8 23.7 314 5-355 6-335 (336)
26 TIGR02819 fdhA_non_GSH formald 100.0 1.9E-46 4.2E-51 351.7 32.4 335 10-351 3-391 (393)
27 PRK10309 galactitol-1-phosphat 100.0 1.8E-46 4E-51 348.3 31.5 328 10-350 1-346 (347)
28 cd05283 CAD1 Cinnamyl alcohol 100.0 7.3E-46 1.6E-50 342.9 34.2 336 12-349 2-337 (337)
29 cd08237 ribitol-5-phosphate_DH 100.0 1.6E-46 3.5E-51 347.3 26.5 319 9-351 2-340 (341)
30 cd08231 MDR_TM0436_like Hypoth 100.0 2.6E-45 5.6E-50 342.4 33.4 337 11-350 2-361 (361)
31 cd08233 butanediol_DH_like (2R 100.0 4.6E-45 1E-49 339.5 31.1 327 10-348 1-350 (351)
32 cd05284 arabinose_DH_like D-ar 100.0 2.7E-43 5.9E-48 326.2 31.9 330 10-350 1-340 (340)
33 TIGR01202 bchC 2-desacetyl-2-h 100.0 5.7E-44 1.2E-48 325.7 26.8 300 9-349 1-308 (308)
34 cd08238 sorbose_phosphate_red 100.0 3.7E-43 8E-48 332.5 30.8 323 8-353 1-371 (410)
35 PRK10083 putative oxidoreducta 100.0 8.4E-43 1.8E-47 322.8 32.4 330 10-352 1-339 (339)
36 cd08299 alcohol_DH_class_I_II_ 100.0 1.1E-42 2.5E-47 325.3 33.5 338 8-350 6-373 (373)
37 PRK09422 ethanol-active dehydr 100.0 2.3E-42 5E-47 319.7 34.3 330 10-350 1-336 (338)
38 cd08278 benzyl_alcohol_DH Benz 100.0 1.5E-42 3.3E-47 323.9 32.9 337 8-349 1-365 (365)
39 cd08240 6_hydroxyhexanoate_dh_ 100.0 1.8E-42 3.8E-47 322.0 31.6 331 10-349 1-349 (350)
40 cd08246 crotonyl_coA_red croto 100.0 1.8E-42 3.9E-47 326.7 31.8 335 6-349 9-392 (393)
41 cd08285 NADP_ADH NADP(H)-depen 100.0 2.6E-42 5.6E-47 321.0 31.2 333 10-350 1-351 (351)
42 cd08283 FDH_like_1 Glutathione 100.0 8.2E-42 1.8E-46 321.1 33.3 336 10-349 1-385 (386)
43 PRK13771 putative alcohol dehy 100.0 4.7E-42 1E-46 317.1 30.9 328 10-350 1-333 (334)
44 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.7E-41 3.6E-46 314.9 32.7 331 10-349 1-344 (345)
45 cd08297 CAD3 Cinnamyl alcohol 100.0 2.9E-41 6.2E-46 312.8 33.5 331 11-350 2-341 (341)
46 cd08291 ETR_like_1 2-enoyl thi 100.0 6.7E-42 1.5E-46 314.8 28.9 291 20-349 16-324 (324)
47 cd08279 Zn_ADH_class_III Class 100.0 3.3E-41 7.2E-46 314.8 33.4 335 10-347 1-362 (363)
48 TIGR01751 crot-CoA-red crotony 100.0 2.2E-41 4.8E-46 319.5 31.6 339 6-353 4-390 (398)
49 PLN03154 putative allyl alcoho 100.0 1.9E-41 4.2E-46 314.0 29.6 293 21-352 26-347 (348)
50 cd05279 Zn_ADH1 Liver alcohol 100.0 4.8E-41 1E-45 313.8 32.0 333 11-348 2-364 (365)
51 cd05278 FDH_like Formaldehyde 100.0 4.5E-41 9.8E-46 312.2 31.2 331 11-349 2-346 (347)
52 cd08259 Zn_ADH5 Alcohol dehydr 100.0 7.9E-41 1.7E-45 308.4 32.3 327 10-349 1-332 (332)
53 cd08298 CAD2 Cinnamyl alcohol 100.0 1.1E-40 2.3E-45 307.4 31.4 324 10-348 1-329 (329)
54 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.2E-40 2.7E-45 308.0 31.6 331 11-350 2-338 (338)
55 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.6E-40 3.5E-45 307.3 32.2 328 10-350 1-337 (337)
56 cd08245 CAD Cinnamyl alcohol d 100.0 1.7E-40 3.7E-45 306.2 31.5 328 12-348 2-330 (330)
57 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.3E-40 2.8E-45 311.3 31.2 337 10-349 1-367 (367)
58 cd08282 PFDH_like Pseudomonas 100.0 3.9E-40 8.4E-45 308.8 33.4 333 11-350 2-375 (375)
59 cd08256 Zn_ADH2 Alcohol dehydr 100.0 2.5E-40 5.4E-45 307.6 30.9 328 10-348 1-350 (350)
60 cd08286 FDH_like_ADH2 formalde 100.0 4.6E-40 1E-44 305.2 31.7 331 10-350 1-345 (345)
61 PRK05396 tdh L-threonine 3-deh 100.0 2.9E-40 6.3E-45 306.1 30.1 329 10-351 1-341 (341)
62 cd08295 double_bond_reductase_ 100.0 2.6E-40 5.7E-45 305.9 29.1 302 10-350 8-338 (338)
63 cd08235 iditol_2_DH_like L-idi 100.0 9.6E-40 2.1E-44 302.8 31.7 326 11-349 2-343 (343)
64 cd08264 Zn_ADH_like2 Alcohol d 100.0 5.5E-40 1.2E-44 302.2 29.8 318 11-346 2-324 (325)
65 cd08284 FDH_like_2 Glutathione 100.0 9.4E-40 2E-44 303.0 31.5 330 10-349 1-343 (344)
66 cd08287 FDH_like_ADH3 formalde 100.0 1.8E-39 4E-44 301.2 31.5 327 10-349 1-344 (345)
67 cd08242 MDR_like Medium chain 100.0 1.4E-39 3.1E-44 298.7 30.0 316 10-350 1-319 (319)
68 cd08262 Zn_ADH8 Alcohol dehydr 100.0 3.2E-39 6.9E-44 299.1 31.5 317 10-349 1-341 (341)
69 KOG0025 Zn2+-binding dehydroge 100.0 1.3E-39 2.9E-44 275.7 26.0 308 8-350 20-352 (354)
70 cd08292 ETR_like_2 2-enoyl thi 100.0 3.2E-39 7E-44 296.8 30.2 301 11-349 2-324 (324)
71 cd05285 sorbitol_DH Sorbitol d 100.0 4.9E-39 1.1E-43 298.1 30.7 320 18-348 6-341 (343)
72 PLN02702 L-idonate 5-dehydroge 100.0 8.4E-39 1.8E-43 298.8 32.5 321 18-349 25-363 (364)
73 cd08266 Zn_ADH_like1 Alcohol d 100.0 7.8E-39 1.7E-43 295.9 31.9 330 11-350 2-342 (342)
74 cd08232 idonate-5-DH L-idonate 100.0 7.8E-39 1.7E-43 296.3 31.4 325 18-350 5-339 (339)
75 TIGR02825 B4_12hDH leukotriene 100.0 2E-39 4.4E-44 298.4 27.1 288 16-349 13-325 (325)
76 cd08293 PTGR2 Prostaglandin re 100.0 4.7E-39 1E-43 298.4 29.8 293 20-350 21-345 (345)
77 cd08274 MDR9 Medium chain dehy 100.0 6.2E-39 1.3E-43 298.2 30.4 311 20-350 13-350 (350)
78 cd08265 Zn_ADH3 Alcohol dehydr 100.0 6.3E-39 1.4E-43 301.4 30.6 317 21-348 38-383 (384)
79 cd08236 sugar_DH NAD(P)-depend 100.0 8.8E-39 1.9E-43 296.4 30.8 325 10-348 1-343 (343)
80 cd08294 leukotriene_B4_DH_like 100.0 4E-39 8.7E-44 296.9 27.8 296 9-350 2-329 (329)
81 TIGR03366 HpnZ_proposed putati 100.0 2.6E-39 5.6E-44 291.3 24.1 262 66-330 1-280 (280)
82 cd05281 TDH Threonine dehydrog 100.0 4.3E-38 9.2E-43 291.5 29.8 328 10-350 1-341 (341)
83 cd08234 threonine_DH_like L-th 100.0 3.1E-37 6.7E-42 284.9 31.6 324 10-348 1-333 (334)
84 TIGR02817 adh_fam_1 zinc-bindi 100.0 9.7E-38 2.1E-42 288.5 28.0 297 17-349 12-334 (336)
85 TIGR00692 tdh L-threonine 3-de 100.0 3.2E-37 7E-42 285.6 30.7 320 18-350 7-340 (340)
86 KOG1198 Zinc-binding oxidoredu 100.0 1E-37 2.2E-42 284.3 26.7 293 22-351 20-346 (347)
87 cd08290 ETR 2-enoyl thioester 100.0 1.8E-37 4E-42 287.3 28.4 305 10-350 1-341 (341)
88 cd08258 Zn_ADH4 Alcohol dehydr 100.0 3.1E-37 6.6E-42 281.4 27.9 296 11-316 2-306 (306)
89 cd08244 MDR_enoyl_red Possible 100.0 2E-36 4.2E-41 278.3 31.3 304 11-350 2-324 (324)
90 cd08276 MDR7 Medium chain dehy 100.0 5.5E-36 1.2E-40 276.5 31.8 325 10-350 1-336 (336)
91 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 4.3E-36 9.3E-41 276.1 30.5 306 11-350 2-325 (325)
92 cd08270 MDR4 Medium chain dehy 100.0 3.5E-36 7.6E-41 274.3 29.5 294 11-350 2-305 (305)
93 cd05282 ETR_like 2-enoyl thioe 100.0 3.8E-36 8.2E-41 276.3 29.1 292 21-349 13-323 (323)
94 PRK10754 quinone oxidoreductas 100.0 2.9E-36 6.3E-41 277.7 27.3 303 10-349 2-326 (327)
95 PTZ00354 alcohol dehydrogenase 100.0 8.1E-36 1.8E-40 275.3 30.1 307 10-353 2-331 (334)
96 TIGR02823 oxido_YhdH putative 100.0 2.4E-35 5.2E-40 271.1 31.6 302 16-350 8-323 (323)
97 cd08289 MDR_yhfp_like Yhfp put 100.0 1.7E-35 3.7E-40 272.4 28.6 308 10-350 1-326 (326)
98 cd08250 Mgc45594_like Mgc45594 100.0 3.1E-35 6.8E-40 271.0 29.4 299 10-349 2-329 (329)
99 cd08243 quinone_oxidoreductase 100.0 4E-35 8.7E-40 268.8 29.4 296 20-348 13-319 (320)
100 cd08249 enoyl_reductase_like e 100.0 1.6E-35 3.6E-40 274.0 26.9 307 11-350 2-339 (339)
101 cd08252 AL_MDR Arginate lyase 100.0 1.5E-34 3.2E-39 267.2 29.3 293 22-349 18-336 (336)
102 cd08248 RTN4I1 Human Reticulon 100.0 1.1E-34 2.3E-39 269.8 27.9 293 22-349 16-350 (350)
103 cd08269 Zn_ADH9 Alcohol dehydr 100.0 2.2E-34 4.7E-39 263.3 29.3 291 18-348 3-311 (312)
104 cd08253 zeta_crystallin Zeta-c 100.0 2.8E-34 6.1E-39 263.3 29.2 309 10-350 3-325 (325)
105 COG2130 Putative NADP-dependen 100.0 2.8E-34 6E-39 245.9 24.9 293 20-352 25-340 (340)
106 cd08288 MDR_yhdh Yhdh putative 100.0 1.4E-33 3.1E-38 259.3 30.4 308 10-350 1-324 (324)
107 cd05276 p53_inducible_oxidored 100.0 1.5E-33 3.2E-38 258.1 29.3 302 10-348 1-323 (323)
108 cd05286 QOR2 Quinone oxidoredu 100.0 3.2E-33 6.9E-38 255.6 30.8 294 19-350 11-320 (320)
109 cd05288 PGDH Prostaglandin deh 100.0 9.7E-34 2.1E-38 261.0 27.4 289 19-348 17-329 (329)
110 cd08273 MDR8 Medium chain dehy 100.0 2.3E-33 4.9E-38 258.7 28.1 294 16-348 9-330 (331)
111 cd08247 AST1_like AST1 is a cy 100.0 2.4E-33 5.2E-38 260.9 28.4 308 11-350 2-352 (352)
112 cd08272 MDR6 Medium chain dehy 100.0 7.1E-33 1.5E-37 254.4 29.3 305 10-350 1-326 (326)
113 cd05188 MDR Medium chain reduc 100.0 4.8E-33 1E-37 248.9 25.9 265 36-313 1-271 (271)
114 cd08271 MDR5 Medium chain dehy 100.0 7.3E-33 1.6E-37 254.4 27.6 306 10-350 1-325 (325)
115 TIGR02824 quinone_pig3 putativ 100.0 4.9E-32 1.1E-36 248.6 30.4 295 19-350 12-325 (325)
116 cd08268 MDR2 Medium chain dehy 100.0 6.5E-32 1.4E-36 248.1 30.0 299 19-349 12-327 (328)
117 cd05289 MDR_like_2 alcohol deh 100.0 3.5E-32 7.5E-37 247.8 26.3 289 21-348 14-309 (309)
118 cd08267 MDR1 Medium chain dehy 100.0 6.4E-32 1.4E-36 247.5 27.2 298 16-348 6-319 (319)
119 cd08251 polyketide_synthase po 100.0 9.6E-32 2.1E-36 244.3 27.0 283 29-348 2-303 (303)
120 cd08241 QOR1 Quinone oxidoredu 100.0 4E-31 8.7E-36 242.2 28.5 294 18-349 11-323 (323)
121 cd08275 MDR3 Medium chain dehy 100.0 1.6E-30 3.4E-35 240.1 30.0 293 20-350 12-337 (337)
122 cd05195 enoyl_red enoyl reduct 100.0 1.6E-30 3.5E-35 234.5 25.6 273 35-348 1-293 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 8.5E-30 1.8E-34 229.5 24.1 268 39-348 2-288 (288)
124 KOG1202 Animal-type fatty acid 100.0 1.4E-29 3E-34 246.3 15.3 286 22-353 1429-1744(2376)
125 cd08255 2-desacetyl-2-hydroxye 100.0 7.3E-28 1.6E-32 216.6 21.8 243 62-348 19-277 (277)
126 KOG1196 Predicted NAD-dependen 99.9 7.5E-25 1.6E-29 187.4 22.8 281 30-352 33-342 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.9 1.6E-23 3.4E-28 161.0 9.5 108 34-149 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 1.1E-16 2.4E-21 127.1 11.5 124 191-315 1-130 (130)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.5 2.4E-14 5.3E-19 113.0 6.8 117 224-348 1-127 (127)
130 cd00401 AdoHcyase S-adenosyl-L 99.5 7.5E-13 1.6E-17 123.1 14.0 174 168-351 188-377 (413)
131 PRK09424 pntA NAD(P) transhydr 99.3 3.3E-11 7.2E-16 115.0 16.1 141 179-320 163-334 (509)
132 PRK11873 arsM arsenite S-adeno 98.6 2.8E-07 6.1E-12 82.6 11.1 164 178-347 75-258 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.6 7.4E-07 1.6E-11 85.2 14.0 100 179-279 162-288 (511)
134 PRK08306 dipicolinate synthase 98.6 3.1E-06 6.7E-11 76.5 16.2 111 180-297 151-261 (296)
135 PRK05476 S-adenosyl-L-homocyst 98.5 1.2E-06 2.6E-11 82.2 12.5 106 166-279 196-303 (425)
136 TIGR00518 alaDH alanine dehydr 98.4 6E-06 1.3E-10 77.0 14.8 99 180-278 166-270 (370)
137 PLN02494 adenosylhomocysteinas 98.4 7.6E-06 1.7E-10 77.1 13.7 102 169-278 241-344 (477)
138 TIGR00936 ahcY adenosylhomocys 98.3 6.6E-06 1.4E-10 76.8 11.4 103 168-278 181-285 (406)
139 TIGR02853 spore_dpaA dipicolin 98.2 2.6E-05 5.6E-10 70.1 13.2 99 180-283 150-248 (287)
140 TIGR01035 hemA glutamyl-tRNA r 98.2 1.9E-07 4.1E-12 88.5 -1.9 160 66-257 89-253 (417)
141 cd05213 NAD_bind_Glutamyl_tRNA 98.1 1.3E-05 2.7E-10 73.2 8.4 109 144-257 139-251 (311)
142 PTZ00075 Adenosylhomocysteinas 98.1 3.4E-05 7.3E-10 73.0 11.4 125 145-277 217-343 (476)
143 PRK12771 putative glutamate sy 98.1 4.2E-06 9E-11 82.9 5.7 96 178-274 134-252 (564)
144 PF01488 Shikimate_DH: Shikima 98.1 1.5E-05 3.3E-10 63.3 7.4 95 179-277 10-111 (135)
145 PRK08324 short chain dehydroge 98.0 3.5E-05 7.6E-10 78.0 10.0 111 133-254 385-508 (681)
146 PRK00517 prmA ribosomal protei 97.9 7.7E-05 1.7E-09 65.9 10.1 130 135-277 79-215 (250)
147 COG4221 Short-chain alcohol de 97.9 7.4E-05 1.6E-09 64.0 9.1 76 180-255 5-92 (246)
148 COG0300 DltE Short-chain dehyd 97.7 0.00025 5.5E-09 62.3 9.9 77 179-255 4-95 (265)
149 KOG1209 1-Acyl dihydroxyaceton 97.7 0.00035 7.5E-09 58.3 9.8 105 180-284 6-147 (289)
150 COG1748 LYS9 Saccharopine dehy 97.7 0.0004 8.7E-09 64.3 10.5 98 182-279 2-103 (389)
151 COG3967 DltE Short-chain dehyd 97.6 0.00026 5.7E-09 58.8 7.8 75 180-254 4-88 (245)
152 COG2518 Pcm Protein-L-isoaspar 97.6 0.00062 1.3E-08 57.3 10.2 103 171-276 64-170 (209)
153 PRK00045 hemA glutamyl-tRNA re 97.6 0.0003 6.4E-09 67.1 9.1 161 66-257 91-255 (423)
154 PRK05786 fabG 3-ketoacyl-(acyl 97.6 0.00089 1.9E-08 58.4 11.0 98 180-277 4-137 (238)
155 PRK12742 oxidoreductase; Provi 97.5 0.0013 2.8E-08 57.4 11.5 75 180-254 5-85 (237)
156 PF02826 2-Hacid_dh_C: D-isome 97.5 0.00066 1.4E-08 56.6 8.7 121 179-331 34-160 (178)
157 PF00670 AdoHcyase_NAD: S-aden 97.5 0.0024 5.3E-08 51.6 11.2 97 175-279 17-114 (162)
158 COG0686 Ald Alanine dehydrogen 97.5 0.0011 2.3E-08 58.7 9.7 98 182-279 169-272 (371)
159 PF13460 NAD_binding_10: NADH( 97.4 0.0013 2.8E-08 54.9 9.8 91 184-277 1-99 (183)
160 PRK00377 cbiT cobalt-precorrin 97.3 0.0022 4.7E-08 54.5 10.4 95 178-273 38-143 (198)
161 PRK06182 short chain dehydroge 97.3 0.0029 6.3E-08 56.5 11.5 75 180-255 2-85 (273)
162 PRK00258 aroE shikimate 5-dehy 97.3 0.002 4.4E-08 57.8 10.2 110 166-277 107-223 (278)
163 PRK05993 short chain dehydroge 97.3 0.0038 8.2E-08 56.0 11.9 74 180-254 3-86 (277)
164 PF12847 Methyltransf_18: Meth 97.3 0.0015 3.2E-08 49.7 7.9 94 180-274 1-110 (112)
165 PLN03209 translocon at the inn 97.3 0.0021 4.6E-08 62.6 10.5 78 178-255 77-170 (576)
166 cd01080 NAD_bind_m-THF_DH_Cycl 97.3 0.003 6.5E-08 51.9 9.9 98 158-278 21-119 (168)
167 KOG1205 Predicted dehydrogenas 97.3 0.0028 6.1E-08 56.3 10.2 104 179-283 10-157 (282)
168 PRK08265 short chain dehydroge 97.3 0.004 8.7E-08 55.2 11.5 75 180-254 5-90 (261)
169 TIGR01809 Shik-DH-AROM shikima 97.2 0.0036 7.8E-08 56.3 11.0 76 180-255 124-201 (282)
170 cd01078 NAD_bind_H4MPT_DH NADP 97.2 0.0059 1.3E-07 51.6 11.6 77 179-255 26-108 (194)
171 PRK05872 short chain dehydroge 97.2 0.0024 5.1E-08 57.9 9.6 75 180-254 8-95 (296)
172 PRK12548 shikimate 5-dehydroge 97.2 0.007 1.5E-07 54.6 12.3 100 179-278 124-239 (289)
173 PRK06139 short chain dehydroge 97.2 0.0032 6.9E-08 58.1 10.0 75 180-254 6-94 (330)
174 PRK05693 short chain dehydroge 97.1 0.0032 6.9E-08 56.3 9.5 72 182-254 2-82 (274)
175 PRK07109 short chain dehydroge 97.1 0.0072 1.6E-07 55.8 12.0 75 180-254 7-95 (334)
176 PF01262 AlaDh_PNT_C: Alanine 97.1 0.0021 4.6E-08 53.1 7.6 98 180-278 19-142 (168)
177 TIGR01470 cysG_Nterm siroheme 97.1 0.01 2.2E-07 50.6 11.9 116 180-299 8-125 (205)
178 PRK07060 short chain dehydroge 97.1 0.004 8.7E-08 54.4 9.8 75 180-254 8-87 (245)
179 PRK14175 bifunctional 5,10-met 97.1 0.0055 1.2E-07 54.6 10.4 97 159-278 136-233 (286)
180 COG2242 CobL Precorrin-6B meth 97.1 0.006 1.3E-07 50.3 9.8 97 179-277 33-137 (187)
181 cd01065 NAD_bind_Shikimate_DH 97.1 0.0082 1.8E-07 48.6 10.8 105 171-278 9-119 (155)
182 PRK12939 short chain dehydroge 97.1 0.007 1.5E-07 53.0 10.9 75 180-254 6-94 (250)
183 PF11017 DUF2855: Protein of u 97.0 0.019 4.1E-07 51.8 13.4 157 180-342 135-312 (314)
184 COG0169 AroE Shikimate 5-dehyd 97.0 0.0032 7E-08 56.2 8.4 109 168-277 111-228 (283)
185 TIGR00406 prmA ribosomal prote 97.0 0.004 8.7E-08 56.2 9.2 96 179-277 158-261 (288)
186 PF01135 PCMT: Protein-L-isoas 97.0 0.0024 5.2E-08 54.6 7.2 101 172-274 65-171 (209)
187 PF13241 NAD_binding_7: Putati 97.0 0.0011 2.3E-08 49.9 4.5 93 180-282 6-98 (103)
188 PRK13940 glutamyl-tRNA reducta 97.0 0.0057 1.2E-07 57.9 10.3 76 179-257 179-255 (414)
189 PF03435 Saccharop_dh: Sacchar 97.0 0.0033 7.1E-08 59.3 8.8 91 184-274 1-97 (386)
190 PRK06718 precorrin-2 dehydroge 97.0 0.0034 7.4E-08 53.4 8.0 115 180-299 9-125 (202)
191 PRK06057 short chain dehydroge 97.0 0.0055 1.2E-07 54.1 9.7 75 180-254 6-89 (255)
192 PRK06200 2,3-dihydroxy-2,3-dih 97.0 0.0052 1.1E-07 54.5 9.5 75 180-254 5-90 (263)
193 PRK08261 fabG 3-ketoacyl-(acyl 97.0 0.0077 1.7E-07 58.1 11.3 75 180-254 209-294 (450)
194 PRK12549 shikimate 5-dehydroge 97.0 0.0069 1.5E-07 54.5 10.2 97 179-278 125-230 (284)
195 PRK06484 short chain dehydroge 97.0 0.0093 2E-07 58.6 12.0 76 179-254 267-353 (520)
196 PRK12367 short chain dehydroge 97.0 0.0051 1.1E-07 54.2 9.1 74 180-254 13-89 (245)
197 TIGR00507 aroE shikimate 5-deh 96.9 0.0079 1.7E-07 53.8 10.3 106 168-278 104-217 (270)
198 PRK12829 short chain dehydroge 96.9 0.0055 1.2E-07 54.2 9.3 77 179-255 9-97 (264)
199 TIGR03325 BphB_TodD cis-2,3-di 96.9 0.0071 1.5E-07 53.6 9.7 75 180-254 4-89 (262)
200 PRK05866 short chain dehydroge 96.9 0.005 1.1E-07 55.8 8.7 76 180-255 39-128 (293)
201 PRK06500 short chain dehydroge 96.9 0.0076 1.6E-07 52.8 9.7 75 180-254 5-90 (249)
202 PRK08618 ornithine cyclodeamin 96.9 0.0097 2.1E-07 54.7 10.6 99 173-278 120-224 (325)
203 PRK12749 quinate/shikimate deh 96.9 0.0087 1.9E-07 53.9 9.9 86 170-255 113-207 (288)
204 PRK07806 short chain dehydroge 96.9 0.011 2.3E-07 51.9 10.3 97 180-276 5-135 (248)
205 PRK07825 short chain dehydroge 96.9 0.0073 1.6E-07 53.9 9.4 75 180-254 4-88 (273)
206 PLN00203 glutamyl-tRNA reducta 96.8 0.0093 2E-07 58.0 10.5 97 181-278 266-372 (519)
207 PRK06196 oxidoreductase; Provi 96.8 0.0085 1.8E-07 54.8 9.6 75 180-254 25-109 (315)
208 PRK07814 short chain dehydroge 96.8 0.0081 1.8E-07 53.3 9.1 75 180-254 9-97 (263)
209 PRK03369 murD UDP-N-acetylmura 96.8 0.0078 1.7E-07 58.6 9.7 72 179-255 10-81 (488)
210 PRK08339 short chain dehydroge 96.8 0.0096 2.1E-07 52.9 9.5 75 180-254 7-95 (263)
211 PRK07063 short chain dehydroge 96.8 0.0078 1.7E-07 53.3 8.9 75 180-254 6-96 (260)
212 TIGR02469 CbiT precorrin-6Y C5 96.8 0.019 4.2E-07 44.2 10.1 95 179-274 18-121 (124)
213 PRK12550 shikimate 5-dehydroge 96.8 0.017 3.8E-07 51.4 10.9 102 167-277 109-218 (272)
214 PRK14027 quinate/shikimate deh 96.8 0.01 2.2E-07 53.2 9.5 76 179-255 125-205 (283)
215 PRK07062 short chain dehydroge 96.8 0.0082 1.8E-07 53.3 8.9 75 180-254 7-97 (265)
216 PRK09291 short chain dehydroge 96.8 0.01 2.2E-07 52.3 9.4 74 181-254 2-83 (257)
217 PRK05854 short chain dehydroge 96.7 0.0078 1.7E-07 55.1 8.7 75 180-254 13-103 (313)
218 PRK07424 bifunctional sterol d 96.7 0.012 2.7E-07 55.5 10.2 75 180-254 177-255 (406)
219 TIGR02992 ectoine_eutC ectoine 96.7 0.013 2.8E-07 53.9 10.1 94 179-277 127-226 (326)
220 PRK05867 short chain dehydroge 96.7 0.0088 1.9E-07 52.7 8.8 75 180-254 8-96 (253)
221 PRK07831 short chain dehydroge 96.7 0.013 2.8E-07 52.0 9.9 76 179-254 15-107 (262)
222 PRK07231 fabG 3-ketoacyl-(acyl 96.7 0.0098 2.1E-07 52.1 9.0 75 180-254 4-91 (251)
223 PRK07576 short chain dehydroge 96.7 0.0074 1.6E-07 53.6 8.2 76 179-254 7-96 (264)
224 PRK12809 putative oxidoreducta 96.7 0.0083 1.8E-07 60.5 9.3 75 180-255 309-406 (639)
225 PRK07832 short chain dehydroge 96.7 0.03 6.5E-07 49.9 12.1 72 183-254 2-88 (272)
226 PRK13943 protein-L-isoaspartat 96.7 0.017 3.8E-07 52.7 10.5 95 178-274 78-179 (322)
227 PRK12429 3-hydroxybutyrate deh 96.7 0.029 6.3E-07 49.3 11.8 75 180-254 3-91 (258)
228 PRK05717 oxidoreductase; Valid 96.7 0.013 2.9E-07 51.6 9.6 76 179-254 8-94 (255)
229 PRK06180 short chain dehydroge 96.7 0.011 2.4E-07 52.9 9.2 76 180-255 3-89 (277)
230 PRK07523 gluconate 5-dehydroge 96.7 0.011 2.4E-07 52.1 9.0 75 180-254 9-97 (255)
231 PRK06949 short chain dehydroge 96.7 0.011 2.3E-07 52.2 8.9 76 179-254 7-96 (258)
232 PRK07340 ornithine cyclodeamin 96.6 0.019 4.1E-07 52.2 10.5 100 173-279 118-221 (304)
233 PRK07453 protochlorophyllide o 96.6 0.0097 2.1E-07 54.6 8.7 74 180-253 5-92 (322)
234 PRK08217 fabG 3-ketoacyl-(acyl 96.6 0.015 3.2E-07 51.0 9.6 75 180-254 4-92 (253)
235 PRK05876 short chain dehydroge 96.6 0.011 2.4E-07 53.0 8.8 75 180-254 5-93 (275)
236 PRK06194 hypothetical protein; 96.6 0.013 2.8E-07 52.7 9.3 76 180-255 5-94 (287)
237 cd01075 NAD_bind_Leu_Phe_Val_D 96.6 0.026 5.7E-07 47.9 10.6 82 179-266 26-107 (200)
238 PRK07478 short chain dehydroge 96.6 0.011 2.4E-07 52.1 8.8 75 180-254 5-93 (254)
239 PRK06505 enoyl-(acyl carrier p 96.6 0.014 3E-07 52.2 9.4 75 180-254 6-95 (271)
240 PRK11705 cyclopropane fatty ac 96.6 0.0069 1.5E-07 56.9 7.6 112 161-275 148-267 (383)
241 PRK14192 bifunctional 5,10-met 96.6 0.023 5E-07 50.9 10.6 86 170-278 148-234 (283)
242 PRK07326 short chain dehydroge 96.6 0.012 2.5E-07 51.2 8.7 75 180-254 5-92 (237)
243 PRK08263 short chain dehydroge 96.6 0.03 6.5E-07 50.0 11.5 75 181-255 3-88 (275)
244 PLN02253 xanthoxin dehydrogena 96.6 0.016 3.5E-07 51.9 9.7 75 180-254 17-104 (280)
245 PRK06484 short chain dehydroge 96.6 0.013 2.7E-07 57.6 9.7 76 179-254 3-89 (520)
246 CHL00194 ycf39 Ycf39; Provisio 96.6 0.015 3.3E-07 53.2 9.6 71 183-254 2-74 (317)
247 PRK07890 short chain dehydroge 96.6 0.011 2.3E-07 52.2 8.4 76 179-254 3-92 (258)
248 PRK06719 precorrin-2 dehydroge 96.6 0.018 3.9E-07 46.9 8.9 90 179-275 11-100 (157)
249 PRK09186 flagellin modificatio 96.6 0.012 2.6E-07 51.9 8.5 74 180-253 3-92 (256)
250 PRK09242 tropinone reductase; 96.6 0.013 2.8E-07 51.7 8.8 75 180-254 8-98 (257)
251 PRK12828 short chain dehydroge 96.6 0.012 2.6E-07 51.0 8.4 75 180-254 6-92 (239)
252 PRK06141 ornithine cyclodeamin 96.6 0.017 3.6E-07 52.9 9.5 99 174-277 119-221 (314)
253 PRK06128 oxidoreductase; Provi 96.5 0.041 8.8E-07 49.9 12.0 75 180-254 54-144 (300)
254 PRK05884 short chain dehydroge 96.5 0.018 3.8E-07 49.9 9.2 71 183-253 2-78 (223)
255 cd05311 NAD_bind_2_malic_enz N 96.5 0.031 6.7E-07 48.5 10.6 103 170-277 14-130 (226)
256 PRK07677 short chain dehydroge 96.5 0.014 3E-07 51.4 8.7 74 181-254 1-88 (252)
257 PRK13944 protein-L-isoaspartat 96.5 0.025 5.5E-07 48.2 9.9 95 178-274 70-172 (205)
258 PRK06841 short chain dehydroge 96.5 0.018 3.9E-07 50.7 9.2 74 180-254 14-99 (255)
259 COG1648 CysG Siroheme synthase 96.5 0.04 8.7E-07 47.0 10.9 118 180-301 11-130 (210)
260 PRK13942 protein-L-isoaspartat 96.5 0.022 4.9E-07 48.9 9.4 96 177-274 73-175 (212)
261 PRK07024 short chain dehydroge 96.5 0.022 4.8E-07 50.3 9.7 74 181-254 2-88 (257)
262 PRK06483 dihydromonapterin red 96.5 0.02 4.4E-07 49.8 9.3 74 181-254 2-84 (236)
263 PRK04457 spermidine synthase; 96.5 0.045 9.8E-07 48.6 11.4 95 179-274 65-176 (262)
264 COG0373 HemA Glutamyl-tRNA red 96.5 0.023 5E-07 53.2 9.8 96 179-278 176-277 (414)
265 PRK07774 short chain dehydroge 96.4 0.018 3.9E-07 50.5 8.8 75 180-254 5-93 (250)
266 PF02353 CMAS: Mycolic acid cy 96.4 0.014 3E-07 52.1 8.0 96 175-274 57-165 (273)
267 PRK07502 cyclohexadienyl dehyd 96.4 0.024 5.1E-07 51.7 9.7 90 182-276 7-101 (307)
268 PRK08589 short chain dehydroge 96.4 0.019 4.2E-07 51.2 9.0 74 180-254 5-92 (272)
269 PRK08177 short chain dehydroge 96.4 0.017 3.6E-07 49.9 8.4 72 182-254 2-81 (225)
270 COG3288 PntA NAD/NADP transhyd 96.4 0.018 4E-07 51.0 8.4 126 175-301 158-310 (356)
271 TIGR01318 gltD_gamma_fam gluta 96.4 0.015 3.2E-07 56.4 8.7 76 179-255 139-237 (467)
272 PRK08594 enoyl-(acyl carrier p 96.4 0.05 1.1E-06 48.2 11.5 75 180-254 6-97 (257)
273 PRK08267 short chain dehydroge 96.4 0.017 3.6E-07 51.1 8.5 74 182-255 2-88 (260)
274 PRK08415 enoyl-(acyl carrier p 96.4 0.022 4.8E-07 51.0 9.2 75 180-254 4-93 (274)
275 PRK06138 short chain dehydroge 96.4 0.017 3.8E-07 50.6 8.5 75 180-254 4-91 (252)
276 PRK06125 short chain dehydroge 96.4 0.02 4.3E-07 50.6 8.9 75 180-254 6-91 (259)
277 PRK08017 oxidoreductase; Provi 96.4 0.026 5.6E-07 49.7 9.6 72 182-254 3-84 (256)
278 PRK08643 acetoin reductase; Va 96.4 0.019 4.1E-07 50.6 8.6 74 181-254 2-89 (256)
279 PRK08340 glucose-1-dehydrogena 96.4 0.02 4.4E-07 50.6 8.7 72 183-254 2-86 (259)
280 PRK05875 short chain dehydroge 96.4 0.027 5.8E-07 50.3 9.5 75 180-254 6-96 (276)
281 PRK09072 short chain dehydroge 96.4 0.024 5.2E-07 50.2 9.1 76 180-255 4-91 (263)
282 PRK06603 enoyl-(acyl carrier p 96.3 0.025 5.4E-07 50.2 9.1 75 180-254 7-96 (260)
283 PRK10258 biotin biosynthesis p 96.3 0.1 2.2E-06 46.0 12.9 153 179-338 41-202 (251)
284 PRK06197 short chain dehydroge 96.3 0.017 3.6E-07 52.6 8.1 76 179-254 14-105 (306)
285 PRK07067 sorbitol dehydrogenas 96.3 0.025 5.4E-07 49.9 9.0 75 180-254 5-90 (257)
286 PRK14194 bifunctional 5,10-met 96.3 0.026 5.6E-07 50.7 8.9 96 159-277 137-233 (301)
287 PRK06482 short chain dehydroge 96.3 0.03 6.5E-07 50.0 9.6 73 182-254 3-86 (276)
288 PRK07035 short chain dehydroge 96.3 0.026 5.6E-07 49.6 8.8 75 180-254 7-95 (252)
289 PRK06181 short chain dehydroge 96.3 0.026 5.5E-07 50.0 8.8 74 181-254 1-88 (263)
290 PRK12481 2-deoxy-D-gluconate 3 96.2 0.036 7.7E-07 48.8 9.6 75 180-254 7-93 (251)
291 PRK10538 malonic semialdehyde 96.2 0.033 7.1E-07 48.9 9.4 72 183-254 2-84 (248)
292 PRK14191 bifunctional 5,10-met 96.2 0.051 1.1E-06 48.5 10.4 96 159-277 135-231 (285)
293 PRK08213 gluconate 5-dehydroge 96.2 0.028 6E-07 49.7 8.9 75 180-254 11-99 (259)
294 PRK08085 gluconate 5-dehydroge 96.2 0.025 5.5E-07 49.7 8.7 75 180-254 8-96 (254)
295 PRK10792 bifunctional 5,10-met 96.2 0.037 8.1E-07 49.3 9.5 96 159-277 137-233 (285)
296 PLN02780 ketoreductase/ oxidor 96.2 0.022 4.8E-07 52.2 8.5 75 180-254 52-142 (320)
297 PRK13394 3-hydroxybutyrate deh 96.2 0.023 5E-07 50.1 8.3 75 180-254 6-94 (262)
298 PRK14189 bifunctional 5,10-met 96.2 0.035 7.6E-07 49.5 9.1 97 159-278 136-233 (285)
299 PRK07666 fabG 3-ketoacyl-(acyl 96.2 0.027 5.9E-07 49.0 8.5 76 180-255 6-95 (239)
300 PRK06172 short chain dehydroge 96.2 0.023 5E-07 50.0 8.1 75 180-254 6-94 (253)
301 PRK08159 enoyl-(acyl carrier p 96.2 0.033 7.2E-07 49.8 9.2 76 179-254 8-98 (272)
302 TIGR01832 kduD 2-deoxy-D-gluco 96.2 0.032 6.9E-07 48.9 8.9 74 180-254 4-90 (248)
303 PF05368 NmrA: NmrA-like famil 96.2 0.034 7.3E-07 48.3 9.0 70 184-254 1-74 (233)
304 KOG0725 Reductases with broad 96.2 0.031 6.8E-07 49.8 8.8 77 179-255 6-100 (270)
305 KOG1201 Hydroxysteroid 17-beta 96.2 0.027 5.9E-07 49.9 8.1 77 179-255 36-125 (300)
306 PF03807 F420_oxidored: NADP o 96.2 0.045 9.7E-07 40.3 8.4 86 183-274 1-93 (96)
307 PRK06720 hypothetical protein; 96.2 0.04 8.7E-07 45.5 8.8 76 180-255 15-104 (169)
308 KOG1210 Predicted 3-ketosphing 96.2 0.025 5.3E-07 50.5 7.8 77 179-255 31-123 (331)
309 TIGR03589 PseB UDP-N-acetylglu 96.2 0.039 8.4E-07 50.7 9.7 75 180-254 3-84 (324)
310 PRK07533 enoyl-(acyl carrier p 96.2 0.034 7.3E-07 49.2 9.0 75 180-254 9-98 (258)
311 COG2230 Cfa Cyclopropane fatty 96.1 0.023 4.9E-07 50.4 7.6 106 168-277 60-178 (283)
312 PRK08862 short chain dehydroge 96.1 0.041 8.8E-07 47.8 9.2 75 180-254 4-93 (227)
313 TIGR02356 adenyl_thiF thiazole 96.1 0.036 7.9E-07 47.2 8.6 91 180-270 20-137 (202)
314 PRK06463 fabG 3-ketoacyl-(acyl 96.1 0.045 9.7E-07 48.2 9.5 74 180-254 6-89 (255)
315 PRK08251 short chain dehydroge 96.1 0.035 7.5E-07 48.6 8.8 74 181-254 2-91 (248)
316 PRK07574 formate dehydrogenase 96.1 0.038 8.3E-07 51.7 9.3 89 180-275 191-284 (385)
317 PRK12936 3-ketoacyl-(acyl-carr 96.1 0.041 8.8E-07 48.0 9.1 75 180-254 5-90 (245)
318 PRK07985 oxidoreductase; Provi 96.1 0.077 1.7E-06 48.0 11.1 75 180-254 48-138 (294)
319 PF02737 3HCDH_N: 3-hydroxyacy 96.1 0.055 1.2E-06 45.1 9.4 40 183-222 1-40 (180)
320 PRK06198 short chain dehydroge 96.1 0.039 8.5E-07 48.7 9.0 75 180-254 5-94 (260)
321 PRK07904 short chain dehydroge 96.1 0.038 8.2E-07 48.8 8.8 77 179-255 6-98 (253)
322 PRK06935 2-deoxy-D-gluconate 3 96.1 0.033 7.2E-07 49.2 8.5 74 180-254 14-101 (258)
323 PRK08277 D-mannonate oxidoredu 96.1 0.043 9.4E-07 49.0 9.3 75 180-254 9-97 (278)
324 PRK05562 precorrin-2 dehydroge 96.0 0.04 8.7E-07 47.3 8.5 117 179-300 23-142 (223)
325 PRK12747 short chain dehydroge 96.0 0.062 1.3E-06 47.2 10.1 39 180-218 3-43 (252)
326 TIGR02632 RhaD_aldol-ADH rhamn 96.0 0.028 6E-07 57.1 8.8 110 134-254 378-503 (676)
327 TIGR00080 pimt protein-L-isoas 96.0 0.05 1.1E-06 46.8 9.3 95 178-274 75-176 (215)
328 PRK06079 enoyl-(acyl carrier p 96.0 0.038 8.2E-07 48.7 8.7 74 180-254 6-93 (252)
329 PF10727 Rossmann-like: Rossma 96.0 0.017 3.7E-07 45.0 5.6 82 180-268 9-91 (127)
330 PLN02366 spermidine synthase 96.0 0.053 1.2E-06 49.3 9.7 95 179-274 90-205 (308)
331 PRK14982 acyl-ACP reductase; P 96.0 0.04 8.7E-07 50.6 8.9 94 179-278 153-249 (340)
332 PRK00811 spermidine synthase; 96.0 0.088 1.9E-06 47.4 10.9 95 179-274 75-190 (283)
333 PRK08291 ectoine utilization p 96.0 0.071 1.5E-06 49.1 10.6 94 179-277 130-229 (330)
334 PRK07454 short chain dehydroge 96.0 0.043 9.3E-07 47.8 8.8 75 180-254 5-93 (241)
335 TIGR01289 LPOR light-dependent 96.0 0.041 8.9E-07 50.3 9.0 74 181-254 3-91 (314)
336 PRK07097 gluconate 5-dehydroge 96.0 0.04 8.7E-07 48.9 8.7 75 180-254 9-97 (265)
337 PLN02986 cinnamyl-alcohol dehy 96.0 0.037 8E-07 50.7 8.7 75 180-254 4-87 (322)
338 PRK06124 gluconate 5-dehydroge 96.0 0.046 9.9E-07 48.1 9.0 75 180-254 10-98 (256)
339 PRK15181 Vi polysaccharide bio 96.0 0.042 9.1E-07 51.0 9.1 87 167-254 2-100 (348)
340 PRK12826 3-ketoacyl-(acyl-carr 96.0 0.04 8.7E-07 48.2 8.5 76 180-255 5-94 (251)
341 TIGR03840 TMPT_Se_Te thiopurin 96.0 0.041 8.9E-07 47.2 8.3 96 179-276 33-153 (213)
342 PRK14188 bifunctional 5,10-met 96.0 0.049 1.1E-06 49.0 9.0 96 159-278 136-233 (296)
343 PRK06940 short chain dehydroge 96.0 0.043 9.4E-07 49.1 8.8 73 182-255 3-87 (275)
344 PRK06914 short chain dehydroge 96.0 0.037 8E-07 49.5 8.4 74 181-254 3-91 (280)
345 PLN02989 cinnamyl-alcohol dehy 96.0 0.032 7E-07 51.1 8.2 75 180-254 4-87 (325)
346 COG2423 Predicted ornithine cy 96.0 0.068 1.5E-06 48.8 10.0 103 173-277 123-227 (330)
347 PRK08261 fabG 3-ketoacyl-(acyl 96.0 0.0085 1.8E-07 57.8 4.5 93 175-278 28-126 (450)
348 PRK12937 short chain dehydroge 96.0 0.12 2.7E-06 45.0 11.6 75 180-254 4-93 (245)
349 PRK06101 short chain dehydroge 95.9 0.054 1.2E-06 47.3 9.1 73 182-254 2-81 (240)
350 PRK07074 short chain dehydroge 95.9 0.05 1.1E-06 47.9 9.0 75 181-255 2-88 (257)
351 PRK12823 benD 1,6-dihydroxycyc 95.9 0.057 1.2E-06 47.7 9.4 75 180-254 7-94 (260)
352 PLN02928 oxidoreductase family 95.9 0.046 9.9E-07 50.7 9.0 94 180-275 158-262 (347)
353 TIGR02622 CDP_4_6_dhtase CDP-g 95.9 0.039 8.4E-07 51.2 8.6 75 180-254 3-85 (349)
354 PRK08690 enoyl-(acyl carrier p 95.9 0.045 9.7E-07 48.6 8.6 75 180-254 5-94 (261)
355 PF00106 adh_short: short chai 95.9 0.034 7.4E-07 45.3 7.3 74 182-255 1-91 (167)
356 PRK08703 short chain dehydroge 95.9 0.061 1.3E-06 46.8 9.3 43 180-222 5-48 (239)
357 PRK07984 enoyl-(acyl carrier p 95.9 0.049 1.1E-06 48.4 8.7 75 180-254 5-94 (262)
358 PRK06113 7-alpha-hydroxysteroi 95.9 0.047 1E-06 48.1 8.6 75 180-254 10-98 (255)
359 KOG1208 Dehydrogenases with di 95.9 0.047 1E-06 49.7 8.6 76 179-254 33-124 (314)
360 PRK06701 short chain dehydroge 95.9 0.096 2.1E-06 47.3 10.7 76 179-254 44-134 (290)
361 PRK06179 short chain dehydroge 95.9 0.028 6.2E-07 49.9 7.2 71 181-254 4-83 (270)
362 PRK07066 3-hydroxybutyryl-CoA 95.9 0.15 3.3E-06 46.5 11.9 89 181-269 7-113 (321)
363 COG2264 PrmA Ribosomal protein 95.8 0.039 8.5E-07 49.4 7.8 129 143-279 129-267 (300)
364 PLN02896 cinnamyl-alcohol dehy 95.8 0.064 1.4E-06 49.9 9.7 76 179-254 8-89 (353)
365 PRK07889 enoyl-(acyl carrier p 95.8 0.058 1.3E-06 47.7 9.0 75 180-254 6-95 (256)
366 cd05212 NAD_bind_m-THF_DH_Cycl 95.8 0.11 2.4E-06 41.3 9.6 98 158-278 5-103 (140)
367 PLN02520 bifunctional 3-dehydr 95.8 0.097 2.1E-06 51.4 11.2 96 180-278 378-478 (529)
368 PRK07791 short chain dehydroge 95.8 0.05 1.1E-06 49.0 8.7 76 179-254 4-102 (286)
369 COG2227 UbiG 2-polyprenyl-3-me 95.8 0.047 1E-06 46.9 7.8 92 179-274 58-160 (243)
370 PRK15469 ghrA bifunctional gly 95.8 0.032 6.8E-07 50.9 7.3 87 180-275 135-226 (312)
371 KOG1610 Corticosteroid 11-beta 95.8 0.1 2.3E-06 46.6 10.1 75 179-253 27-115 (322)
372 PRK06114 short chain dehydroge 95.8 0.063 1.4E-06 47.3 9.0 75 180-254 7-96 (254)
373 PLN03139 formate dehydrogenase 95.8 0.058 1.3E-06 50.5 9.0 89 180-275 198-291 (386)
374 PRK06823 ornithine cyclodeamin 95.8 0.092 2E-06 47.9 10.1 100 173-278 121-225 (315)
375 TIGR01532 E4PD_g-proteo D-eryt 95.8 0.076 1.6E-06 48.6 9.5 94 183-277 1-122 (325)
376 PLN03075 nicotianamine synthas 95.8 0.033 7.2E-07 49.9 7.0 96 179-274 122-232 (296)
377 PRK05653 fabG 3-ketoacyl-(acyl 95.8 0.064 1.4E-06 46.6 8.9 75 180-254 4-92 (246)
378 PRK12384 sorbitol-6-phosphate 95.8 0.053 1.2E-06 47.8 8.5 74 181-254 2-91 (259)
379 PRK08628 short chain dehydroge 95.7 0.062 1.4E-06 47.3 8.9 75 180-254 6-93 (258)
380 PRK13243 glyoxylate reductase; 95.7 0.07 1.5E-06 49.2 9.3 87 180-275 149-240 (333)
381 PRK07775 short chain dehydroge 95.7 0.083 1.8E-06 47.1 9.7 75 180-254 9-97 (274)
382 PRK12769 putative oxidoreducta 95.7 0.039 8.5E-07 55.8 8.4 76 179-255 325-423 (654)
383 PRK06953 short chain dehydroge 95.7 0.063 1.4E-06 46.2 8.6 72 182-254 2-80 (222)
384 PRK08226 short chain dehydroge 95.7 0.071 1.5E-06 47.1 9.1 75 180-254 5-92 (263)
385 PRK06997 enoyl-(acyl carrier p 95.7 0.054 1.2E-06 48.0 8.3 75 180-254 5-94 (260)
386 PRK08416 7-alpha-hydroxysteroi 95.7 0.057 1.2E-06 47.8 8.4 74 180-253 7-96 (260)
387 PLN00141 Tic62-NAD(P)-related 95.7 0.077 1.7E-06 46.7 9.2 75 180-254 16-95 (251)
388 PRK09135 pteridine reductase; 95.7 0.067 1.5E-06 46.7 8.7 75 180-254 5-95 (249)
389 PF02882 THF_DHG_CYH_C: Tetrah 95.7 0.081 1.8E-06 43.0 8.4 99 157-278 12-111 (160)
390 PRK08303 short chain dehydroge 95.7 0.055 1.2E-06 49.3 8.4 74 180-253 7-105 (305)
391 TIGR01963 PHB_DH 3-hydroxybuty 95.7 0.069 1.5E-06 46.8 8.8 74 181-254 1-88 (255)
392 PRK05650 short chain dehydroge 95.7 0.063 1.4E-06 47.8 8.6 72 183-254 2-87 (270)
393 PRK08264 short chain dehydroge 95.7 0.066 1.4E-06 46.5 8.6 71 180-254 5-83 (238)
394 COG1052 LdhA Lactate dehydroge 95.7 0.061 1.3E-06 49.2 8.5 88 179-275 144-236 (324)
395 COG0334 GdhA Glutamate dehydro 95.7 0.14 3.1E-06 47.6 10.9 119 153-274 180-333 (411)
396 PRK07370 enoyl-(acyl carrier p 95.7 0.052 1.1E-06 48.1 8.0 75 180-254 5-97 (258)
397 TIGR00417 speE spermidine synt 95.7 0.1 2.2E-06 46.7 9.8 94 180-274 72-185 (270)
398 PRK06398 aldose dehydrogenase; 95.7 0.039 8.5E-07 48.8 7.2 69 180-254 5-82 (258)
399 PRK14618 NAD(P)H-dependent gly 95.6 0.067 1.4E-06 49.3 8.8 90 182-276 5-105 (328)
400 PRK05565 fabG 3-ketoacyl-(acyl 95.6 0.062 1.3E-06 46.8 8.3 75 181-255 5-94 (247)
401 PRK14176 bifunctional 5,10-met 95.6 0.099 2.2E-06 46.6 9.4 96 159-277 142-238 (287)
402 PRK08993 2-deoxy-D-gluconate 3 95.6 0.083 1.8E-06 46.5 9.0 74 180-254 9-95 (253)
403 TIGR03206 benzo_BadH 2-hydroxy 95.6 0.072 1.6E-06 46.6 8.5 75 180-254 2-90 (250)
404 PRK07069 short chain dehydroge 95.6 0.075 1.6E-06 46.5 8.6 72 183-254 1-89 (251)
405 PF02719 Polysacc_synt_2: Poly 95.5 0.048 1E-06 48.8 7.2 72 184-255 1-88 (293)
406 COG2910 Putative NADH-flavin r 95.5 0.097 2.1E-06 43.1 8.2 91 183-277 2-106 (211)
407 PLN02686 cinnamoyl-CoA reducta 95.5 0.076 1.7E-06 49.7 9.0 75 179-253 51-137 (367)
408 PRK08945 putative oxoacyl-(acy 95.5 0.077 1.7E-06 46.4 8.6 76 179-254 10-102 (247)
409 PRK00107 gidB 16S rRNA methylt 95.5 0.093 2E-06 44.0 8.5 96 178-276 43-146 (187)
410 PRK07856 short chain dehydroge 95.5 0.054 1.2E-06 47.6 7.6 70 180-254 5-85 (252)
411 PLN02730 enoyl-[acyl-carrier-p 95.5 0.1 2.2E-06 47.5 9.4 37 180-217 8-47 (303)
412 PRK08063 enoyl-(acyl carrier p 95.5 0.07 1.5E-06 46.7 8.3 75 180-254 3-92 (250)
413 PF03446 NAD_binding_2: NAD bi 95.5 0.083 1.8E-06 43.2 8.1 88 183-277 3-96 (163)
414 PRK08762 molybdopterin biosynt 95.5 0.081 1.7E-06 49.7 9.0 76 180-255 134-236 (376)
415 PRK14178 bifunctional 5,10-met 95.5 0.16 3.4E-06 45.2 10.1 96 159-277 130-226 (279)
416 PRK01581 speE spermidine synth 95.5 0.23 4.9E-06 45.9 11.4 95 179-275 149-268 (374)
417 PRK08278 short chain dehydroge 95.5 0.076 1.7E-06 47.4 8.4 75 180-254 5-100 (273)
418 PLN02657 3,8-divinyl protochlo 95.4 0.091 2E-06 49.6 9.2 76 179-254 58-146 (390)
419 PRK05599 hypothetical protein; 95.4 0.083 1.8E-06 46.3 8.4 71 183-254 2-87 (246)
420 TIGR01829 AcAcCoA_reduct aceto 95.4 0.088 1.9E-06 45.7 8.5 73 182-254 1-88 (242)
421 TIGR02415 23BDH acetoin reduct 95.4 0.084 1.8E-06 46.3 8.4 73 182-254 1-87 (254)
422 COG2226 UbiE Methylase involve 95.4 0.19 4.2E-06 43.7 10.2 99 179-278 50-159 (238)
423 PRK12475 thiamine/molybdopteri 95.4 0.074 1.6E-06 49.1 8.1 75 180-255 23-127 (338)
424 PRK12743 oxidoreductase; Provi 95.4 0.13 2.8E-06 45.3 9.5 74 181-254 2-90 (256)
425 PRK09134 short chain dehydroge 95.4 0.13 2.8E-06 45.3 9.5 75 180-254 8-97 (258)
426 PRK14106 murD UDP-N-acetylmura 95.4 0.12 2.5E-06 49.9 9.8 71 180-255 4-79 (450)
427 PRK06077 fabG 3-ketoacyl-(acyl 95.4 0.35 7.6E-06 42.2 12.2 97 180-277 5-142 (252)
428 PRK08219 short chain dehydroge 95.3 0.11 2.4E-06 44.6 8.8 73 182-255 4-82 (227)
429 PRK01438 murD UDP-N-acetylmura 95.3 0.13 2.8E-06 50.1 10.2 71 179-255 14-89 (480)
430 PLN02650 dihydroflavonol-4-red 95.3 0.097 2.1E-06 48.6 9.0 75 180-254 4-87 (351)
431 PRK10637 cysG siroheme synthas 95.3 0.076 1.6E-06 51.2 8.4 116 180-299 11-128 (457)
432 PRK07102 short chain dehydroge 95.3 0.09 2E-06 45.9 8.3 73 182-254 2-86 (243)
433 PRK12480 D-lactate dehydrogena 95.3 0.14 3E-06 47.2 9.6 85 180-275 145-234 (330)
434 PLN02819 lysine-ketoglutarate 95.3 0.15 3.2E-06 53.6 10.8 95 180-274 568-678 (1042)
435 PF01210 NAD_Gly3P_dh_N: NAD-d 95.3 0.084 1.8E-06 42.9 7.4 91 183-274 1-101 (157)
436 PRK09310 aroDE bifunctional 3- 95.3 0.13 2.8E-06 49.9 9.9 73 179-256 330-402 (477)
437 PLN02214 cinnamoyl-CoA reducta 95.3 0.12 2.6E-06 47.9 9.4 74 180-254 9-91 (342)
438 PF02558 ApbA: Ketopantoate re 95.3 0.042 9.1E-07 44.2 5.6 90 184-276 1-102 (151)
439 PRK04148 hypothetical protein; 95.3 0.11 2.3E-06 40.8 7.5 87 179-269 15-102 (134)
440 COG0421 SpeE Spermidine syntha 95.3 0.14 3E-06 45.8 9.2 92 182-274 78-189 (282)
441 COG0569 TrkA K+ transport syst 95.3 0.13 2.9E-06 44.5 9.0 83 183-266 2-87 (225)
442 PRK06523 short chain dehydroge 95.3 0.061 1.3E-06 47.5 7.0 69 180-254 8-87 (260)
443 KOG1200 Mitochondrial/plastidi 95.2 0.15 3.2E-06 42.5 8.4 75 181-255 14-101 (256)
444 PF06325 PrmA: Ribosomal prote 95.2 0.017 3.8E-07 51.9 3.5 129 142-279 127-263 (295)
445 PLN02427 UDP-apiose/xylose syn 95.2 0.11 2.5E-06 48.9 9.2 74 180-254 13-96 (386)
446 PLN02695 GDP-D-mannose-3',5'-e 95.2 0.073 1.6E-06 49.9 7.8 75 179-254 19-95 (370)
447 PRK12746 short chain dehydroge 95.2 0.11 2.3E-06 45.7 8.5 75 180-254 5-100 (254)
448 PRK06035 3-hydroxyacyl-CoA deh 95.2 0.21 4.5E-06 45.1 10.5 39 182-220 4-42 (291)
449 PRK12938 acetyacetyl-CoA reduc 95.2 0.14 2.9E-06 44.8 9.1 76 180-255 2-92 (246)
450 PRK08642 fabG 3-ketoacyl-(acyl 95.2 0.11 2.3E-06 45.6 8.4 75 180-254 4-91 (253)
451 PRK07577 short chain dehydroge 95.2 0.088 1.9E-06 45.6 7.7 69 180-254 2-78 (234)
452 TIGR02371 ala_DH_arch alanine 95.2 0.17 3.7E-06 46.4 9.9 100 173-278 121-225 (325)
453 PRK05855 short chain dehydroge 95.2 0.088 1.9E-06 52.3 8.7 76 180-255 314-403 (582)
454 PLN02662 cinnamyl-alcohol dehy 95.2 0.091 2E-06 48.0 8.1 75 180-254 3-86 (322)
455 PRK08317 hypothetical protein; 95.2 0.092 2E-06 45.5 7.8 99 177-276 16-125 (241)
456 PRK08300 acetaldehyde dehydrog 95.2 0.47 1E-05 42.8 12.2 91 182-275 5-101 (302)
457 TIGR03466 HpnA hopanoid-associ 95.1 0.054 1.2E-06 49.5 6.6 71 183-254 2-74 (328)
458 PRK08309 short chain dehydroge 95.1 0.58 1.3E-05 38.9 12.1 86 183-269 2-99 (177)
459 PRK13255 thiopurine S-methyltr 95.1 0.15 3.3E-06 43.9 8.8 94 179-274 36-154 (218)
460 PRK08936 glucose-1-dehydrogena 95.1 0.14 3E-06 45.3 8.9 75 180-254 6-95 (261)
461 PF02254 TrkA_N: TrkA-N domain 95.1 0.29 6.3E-06 37.3 9.6 90 184-274 1-95 (116)
462 PRK14179 bifunctional 5,10-met 95.1 0.15 3.3E-06 45.5 8.9 96 160-278 137-233 (284)
463 PRK13403 ketol-acid reductoiso 95.1 0.21 4.6E-06 45.3 9.8 88 179-274 14-105 (335)
464 KOG1252 Cystathionine beta-syn 95.1 0.2 4.3E-06 45.2 9.5 62 168-230 87-155 (362)
465 PRK07402 precorrin-6B methylas 95.0 0.4 8.6E-06 40.5 11.1 98 178-276 38-143 (196)
466 PRK06522 2-dehydropantoate 2-r 95.0 0.15 3.2E-06 46.3 9.0 90 183-275 2-100 (304)
467 PF01370 Epimerase: NAD depend 95.0 0.11 2.3E-06 45.0 7.8 72 184-255 1-76 (236)
468 PRK05447 1-deoxy-D-xylulose 5- 95.0 0.31 6.7E-06 45.4 10.9 92 182-273 2-120 (385)
469 PRK13656 trans-2-enoyl-CoA red 95.0 0.43 9.3E-06 44.5 11.8 76 179-255 39-142 (398)
470 PRK14967 putative methyltransf 95.0 0.24 5.2E-06 42.8 9.8 92 179-274 35-158 (223)
471 PRK00141 murD UDP-N-acetylmura 95.0 0.19 4.1E-06 48.8 10.1 73 179-255 13-85 (473)
472 PRK06046 alanine dehydrogenase 95.0 0.2 4.4E-06 46.0 9.8 99 173-278 122-226 (326)
473 PRK05557 fabG 3-ketoacyl-(acyl 95.0 0.23 5.1E-06 43.1 9.9 75 180-254 4-93 (248)
474 PLN02823 spermine synthase 94.9 0.22 4.7E-06 45.9 9.7 94 180-274 103-219 (336)
475 PF01118 Semialdhyde_dh: Semia 94.9 0.06 1.3E-06 41.7 5.3 91 183-277 1-99 (121)
476 PLN00198 anthocyanidin reducta 94.9 0.15 3.2E-06 47.1 8.8 75 180-254 8-90 (338)
477 PRK07578 short chain dehydroge 94.9 0.26 5.7E-06 41.5 9.7 60 183-254 2-65 (199)
478 PRK07792 fabG 3-ketoacyl-(acyl 94.9 0.16 3.5E-06 46.2 8.9 75 180-254 11-99 (306)
479 KOG1502 Flavonol reductase/cin 94.9 0.15 3.3E-06 46.2 8.3 74 180-254 5-88 (327)
480 PRK07201 short chain dehydroge 94.9 0.14 3.1E-06 51.8 9.3 74 181-254 371-458 (657)
481 PRK00536 speE spermidine synth 94.8 0.067 1.5E-06 47.3 5.9 93 180-275 72-171 (262)
482 PRK03562 glutathione-regulated 94.8 0.15 3.2E-06 51.2 9.0 74 181-255 400-475 (621)
483 PF00899 ThiF: ThiF family; I 94.8 0.15 3.3E-06 40.2 7.5 92 181-272 2-120 (135)
484 PTZ00098 phosphoethanolamine N 94.8 0.086 1.9E-06 46.9 6.6 103 172-276 45-157 (263)
485 PLN00015 protochlorophyllide r 94.8 0.13 2.9E-06 46.8 8.0 70 185-254 1-85 (308)
486 smart00846 Gp_dh_N Glyceraldeh 94.7 0.39 8.5E-06 38.6 9.6 96 183-278 2-121 (149)
487 cd05211 NAD_bind_Glu_Leu_Phe_V 94.7 0.53 1.2E-05 40.5 11.0 37 179-215 21-57 (217)
488 COG1179 Dinucleotide-utilizing 94.7 0.24 5.1E-06 42.7 8.5 99 180-278 29-156 (263)
489 KOG2733 Uncharacterized membra 94.7 0.093 2E-06 47.6 6.4 93 183-275 7-116 (423)
490 PRK14172 bifunctional 5,10-met 94.7 0.29 6.2E-06 43.6 9.4 97 159-278 136-233 (278)
491 PRK12921 2-dehydropantoate 2-r 94.7 0.17 3.7E-06 45.9 8.5 89 183-274 2-101 (305)
492 COG0027 PurT Formate-dependent 94.7 0.3 6.5E-06 43.6 9.3 166 180-348 11-194 (394)
493 PF02670 DXP_reductoisom: 1-de 94.7 0.7 1.5E-05 36.1 10.5 89 184-272 1-118 (129)
494 PRK14177 bifunctional 5,10-met 94.7 0.25 5.5E-06 44.0 9.1 96 159-277 137-233 (284)
495 cd01487 E1_ThiF_like E1_ThiF_l 94.6 0.21 4.5E-06 41.4 8.1 32 183-214 1-33 (174)
496 TIGR00438 rrmJ cell division p 94.6 0.26 5.6E-06 41.3 8.9 96 175-275 27-146 (188)
497 cd01079 NAD_bind_m-THF_DH NAD 94.6 0.23 4.9E-06 41.6 8.2 113 159-278 31-159 (197)
498 PRK08410 2-hydroxyacid dehydro 94.6 0.2 4.4E-06 45.7 8.7 84 180-275 144-232 (311)
499 PRK06436 glycerate dehydrogena 94.6 0.17 3.6E-06 46.0 8.1 84 180-275 121-209 (303)
500 PRK14190 bifunctional 5,10-met 94.6 0.34 7.5E-06 43.2 9.9 97 159-278 136-233 (284)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=9.9e-68 Score=469.75 Aligned_cols=335 Identities=40% Similarity=0.659 Sum_probs=312.4
Q ss_pred hhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCC
Q 018382 7 ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFK 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~ 86 (357)
+++|+++......+++++.|++.|+|+++||+|+++|+|+|++|++.++|.++...+|+++|||.+|+|+++|++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 46788888877777799999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382 87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV 166 (357)
Q Consensus 87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ 166 (357)
+||||.+..+..+||+|++|++|..|.|+..... |++.+|+|+||+++++.+++++|+++++++||.+.|++.
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~-------gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGi 153 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGI 153 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCcccc-------ceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCee
Confidence 9999988677888999999999999999987655 445899999999999999999999999999999999999
Q ss_pred hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCcc
Q 018382 167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLD 246 (357)
Q Consensus 167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d 246 (357)
|.|++|++... +||++|+|.|.|++|.+++|+|+++|++|+++++++++.+.+++ +|++++++.++++..+.+.+.+|
T Consensus 154 T~y~alk~~~~-~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-lGAd~~i~~~~~~~~~~~~~~~d 231 (339)
T COG1064 154 TTYRALKKANV-KPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-LGADHVINSSDSDALEAVKEIAD 231 (339)
T ss_pred eEeeehhhcCC-CCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-hCCcEEEEcCCchhhHHhHhhCc
Confidence 99999999665 99999999999999999999999999999999999999999999 99999999887777777777799
Q ss_pred EEEEcCCCCCChHHHHhccccCCeEEEEccCC-CC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-E
Q 018382 247 YIIDTVPANHPLEPYLSLLKLDGKLILTGVIN-TP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-E 323 (357)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~ 323 (357)
+++|+++ ...++.+++.|+++|+++.+|... .. ..++...++.+++++.|+..+++.++++++++..++.+++.+ +
T Consensus 232 ~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~e 310 (339)
T COG1064 232 AIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEILE 310 (339)
T ss_pred EEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEEe
Confidence 9999999 659999999999999999999984 33 447778889999999999999999999999999999999999 7
Q ss_pred EeecccHHHHHHHHHcCCccEEEEEecC
Q 018382 324 VIKMDYVNKAFERLEKNDVRYRFVVDVA 351 (357)
Q Consensus 324 ~~~~~~~~~a~~~~~~~~~~Gkvvi~~~ 351 (357)
.++++|+++||+.|++++..||+||++.
T Consensus 311 ~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 311 TIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred eECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 9999999999999999999999999874
No 2
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.1e-64 Score=432.44 Aligned_cols=353 Identities=51% Similarity=0.888 Sum_probs=332.7
Q ss_pred CCCchhhhheeeehccCCCC--CcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEe
Q 018382 1 MGSLDTERATIGWAAKDPSG--ILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEV 78 (357)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~v 78 (357)
|+++..|.++.+|.+++..+ ++++.++++|+|+++||+|+++++|+|++|++.+.|.++..++|.++|||.+|+|+++
T Consensus 1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv 80 (360)
T KOG0023|consen 1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV 80 (360)
T ss_pred CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence 67788999999999988888 5666999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccc
Q 018382 79 GSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQA 158 (357)
Q Consensus 79 G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~a 158 (357)
|++|++|++||||-+-....+|++|++|..+..+.|++.-+.+++.+.||..++|+|++|+++++..++++|+++++++|
T Consensus 81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~a 160 (360)
T KOG0023|consen 81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASA 160 (360)
T ss_pred CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCC-ChhH
Q 018382 159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSS-DATR 237 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~-~~~~ 237 (357)
|.+.|+..|+|.+|...+. .||++|-|.|+|++|.+++|+||++|.+|+++++++.+++++.+++|++..++.. ++++
T Consensus 161 APlLCaGITvYspLk~~g~-~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~ 239 (360)
T KOG0023|consen 161 APLLCAGITVYSPLKRSGL-GPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDI 239 (360)
T ss_pred cchhhcceEEeehhHHcCC-CCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHH
Confidence 9999999999999998887 7999999999977999999999999999999999998888888889999999888 7888
Q ss_pred HHHhhCCccEEEEcCC--CCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHh
Q 018382 238 MQEAADSLDYIIDTVP--ANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCRE 315 (357)
Q Consensus 238 ~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 315 (357)
++++.+-.|.+++++. ....++.+++.|+++|++|++|.+.....++.+.+..+.+++.|+..+.+.+.+++++++.+
T Consensus 240 ~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~ 319 (360)
T KOG0023|consen 240 MKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVAR 319 (360)
T ss_pred HHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHc
Confidence 8888876677777666 55578999999999999999999988888889999999999999999999999999999999
Q ss_pred cCCCccEEEeecccHHHHHHHHHcCCccEEEEEecCCCc
Q 018382 316 KGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSK 354 (357)
Q Consensus 316 ~~l~~~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~~ 354 (357)
+.++..|+..+++++++||++|++++..+|.|+++..+.
T Consensus 320 ~~ik~~IE~v~~~~v~~a~erm~kgdV~yRfVvD~s~~~ 358 (360)
T KOG0023|consen 320 GLIKSPIELVKLSEVNEAYERMEKGDVRYRFVVDVSKSL 358 (360)
T ss_pred CCCcCceEEEehhHHHHHHHHHHhcCeeEEEEEEccccc
Confidence 999999999999999999999999999999999997653
No 3
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.2e-55 Score=410.82 Aligned_cols=347 Identities=52% Similarity=0.985 Sum_probs=301.1
Q ss_pred hhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCC
Q 018382 6 TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNF 85 (357)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~ 85 (357)
-|+|+++|...+.++.++..+++.|+|+++||+||+.++++|++|++++.|.++...+|.++|||++|+|+++|+++++|
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~ 88 (360)
T PLN02586 9 HPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKF 88 (360)
T ss_pred chhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCcc
Confidence 58999999998878889999999999999999999999999999999998876544678999999999999999999999
Q ss_pred CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchh
Q 018382 86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAG 165 (357)
Q Consensus 86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~ 165 (357)
++||||++.+....||.|.+|+.|.++.|+...+.+.....+|...+|+|+||++++++.++++|++++++++|++++.+
T Consensus 89 ~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~ 168 (360)
T PLN02586 89 KEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAG 168 (360)
T ss_pred CCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcch
Confidence 99999976666678999999999999999976543222222333457999999999999999999999999999999999
Q ss_pred hhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCc
Q 018382 166 VTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL 245 (357)
Q Consensus 166 ~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~ 245 (357)
.|+|+++.....+++|++|||.|+|++|++++|+|+..|++|++++.+++++..+.+++|++++++.++.+.+.+..+++
T Consensus 169 ~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~ 248 (360)
T PLN02586 169 ITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTM 248 (360)
T ss_pred HHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCCC
Confidence 99999987777668999999999999999999999999999998888777766555559999999877655555555689
Q ss_pred cEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEEe
Q 018382 246 DYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVI 325 (357)
Q Consensus 246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 325 (357)
|+|||++|....+..++++++++|+++.+|.......++...++.++..+.++..++.++++++++++.++++++.+++|
T Consensus 249 D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~~~ 328 (360)
T PLN02586 249 DYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITADIELI 328 (360)
T ss_pred CEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCcEEEE
Confidence 99999999765688899999999999999876544556666777788888898887788899999999999999877899
Q ss_pred ecccHHHHHHHHHcCCccEEEEEecCC
Q 018382 326 KMDYVNKAFERLEKNDVRYRFVVDVAG 352 (357)
Q Consensus 326 ~~~~~~~a~~~~~~~~~~Gkvvi~~~~ 352 (357)
+|+|+++||+.+++++..||+++++..
T Consensus 329 ~l~~~~~A~~~~~~~~~~gkvvi~~~~ 355 (360)
T PLN02586 329 RMDEINTAMERLAKSDVRYRFVIDVAN 355 (360)
T ss_pred eHHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 999999999999999988999999843
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.7e-56 Score=384.49 Aligned_cols=333 Identities=24% Similarity=0.374 Sum_probs=294.0
Q ss_pred hheeeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCCC---CCCCCccCccccEEEEEeCCCCC
Q 018382 8 RATIGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLGM---SNYPMVPGHEVVGEVKEVGSEVS 83 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~v~ 83 (357)
..+.+.+++ ++++++++++|.|++ .|+||+|++++++||++|+|++...... -+.|+++|||.+|+|+++|+.|+
T Consensus 3 ~~~~A~vl~-g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLR-GKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEE-ccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 456777777 688999999999998 9999999999999999999999876542 24799999999999999999999
Q ss_pred CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccc
Q 018382 84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLC 163 (357)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~ 163 (357)
++++||||++.|.. +|+.|+.|+.|++|.|+...+... .+.+|+|++|++.+++.++|||+++|++++|.+-
T Consensus 82 ~LkVGDrVaiEpg~-~c~~cd~CK~GrYNlCp~m~f~at------pp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e- 153 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGL-PCRDCDFCKEGRYNLCPHMVFCAT------PPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE- 153 (354)
T ss_pred ccccCCeEEecCCC-ccccchhhhCcccccCCccccccC------CCcCCceEEEEEechHheeeCCCCCchhhccccc-
Confidence 99999999776654 599999999999999998876644 3589999999999999999999999999998554
Q ss_pred hhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChh---HHH
Q 018382 164 AGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDAT---RMQ 239 (357)
Q Consensus 164 ~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~ 239 (357)
+++++|+|.+..+. ++|++|||+|+|++|+++...||.+|+ +|++++..+.|++.+++ ||++.+.+....+ .+.
T Consensus 154 PLsV~~HAcr~~~v-k~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~Ga~~~~~~~~~~~~~~~~ 231 (354)
T KOG0024|consen 154 PLSVGVHACRRAGV-KKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-FGATVTDPSSHKSSPQELA 231 (354)
T ss_pred chhhhhhhhhhcCc-ccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-hCCeEEeeccccccHHHHH
Confidence 68999999987776 999999999999999999999999999 99999999999999999 9999988766532 222
Q ss_pred Hh-hC-----CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHH
Q 018382 240 EA-AD-----SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFC 313 (357)
Q Consensus 240 ~~-~~-----~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 313 (357)
+. .+ .+|+.|||+|....++.++..++.+|++++.++.....+|++.....+++++.|++.+....|+.+++++
T Consensus 232 ~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li 311 (354)
T KOG0024|consen 232 ELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELV 311 (354)
T ss_pred HHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHH
Confidence 22 11 4999999999987899999999999999999998888999999999999999999999888999999999
Q ss_pred HhcCCCc--cE-EEeecccHHHHHHHHHcCCcc-EEEEEecC
Q 018382 314 REKGVTS--MI-EVIKMDYVNKAFERLEKNDVR-YRFVVDVA 351 (357)
Q Consensus 314 ~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~-Gkvvi~~~ 351 (357)
++|++.. +| +.|+++++.+||+.+.+++.. -|+++..+
T Consensus 312 ~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~ 353 (354)
T KOG0024|consen 312 SSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP 353 (354)
T ss_pred HcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence 9998875 67 999999999999999887753 48888764
No 5
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3.9e-56 Score=386.90 Aligned_cols=337 Identities=24% Similarity=0.366 Sum_probs=295.5
Q ss_pred hheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382 8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (357)
|++++.+.+...++++++|+++++|+++|||||+.++|+||+|....+|..|.+ +|.+||||.+|+|++||+.|+.+++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 356666767788999999999999999999999999999999999999999987 9999999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCccccccccc-ccCccccCCCCC-----------C--CCccceEEEeeCcceEECCCCC
Q 018382 88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKI-WSYNDVYTDGKP-----------T--QGGFAESMVVDQKFVVKIPDGM 153 (357)
Q Consensus 88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~--~G~~~~~~~v~~~~~~~lP~~l 153 (357)
||+| +..+.+.||.|..|..|.+|.|.... -...+.+.+|.. . .++|++|.++++..++|++++.
T Consensus 80 GDhV-I~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHV-ILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEE-EEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 9999 67788889999999999999998654 223333444411 1 3599999999999999999999
Q ss_pred CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382 154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS 232 (357)
Q Consensus 154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~ 232 (357)
+++.++.+.|...|.+.++.+..++++|++|.|.|.|++|+++||-|+..|+ ++++++.+++|.+++++ ||+++++|.
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~-fGAT~~vn~ 237 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKK-FGATHFVNP 237 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHh-cCCceeecc
Confidence 9999999999999999999999999999999999999999999999999999 99999999999999999 999999998
Q ss_pred CCh-hH---HHHhhC-CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcc--cchHHHhhccceEEEEeec---C
Q 018382 233 SDA-TR---MQEAAD-SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ--FLTPMVMLGRKAITGSFIG---S 302 (357)
Q Consensus 233 ~~~-~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~i~g~~~~---~ 302 (357)
++. +. +.+++. ++|++|||+|....++.+++++.++|+.+.+|....... .+...++.. .++.|++.+ .
T Consensus 238 ~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p 316 (366)
T COG1062 238 KEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGARP 316 (366)
T ss_pred hhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCcc
Confidence 875 23 445555 899999999998889999999999999999998764433 445555555 899999987 3
Q ss_pred HHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 303 MKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 303 ~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
..++..++++..+|+|.. .| +.++|+||+|||+.|++++.. |-||.
T Consensus 317 ~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 317 RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 368999999999998875 67 899999999999999999986 55554
No 6
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3.2e-54 Score=401.11 Aligned_cols=357 Identities=86% Similarity=1.376 Sum_probs=311.2
Q ss_pred CCCchhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCC
Q 018382 1 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGS 80 (357)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~ 80 (357)
|.+..-.+++++|....+.+.+.+++++.|+|+++||+||+.++++|++|++.+.|.++...+|.++|||++|+|+++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~ 80 (357)
T PLN02514 1 MGSLEAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGS 80 (357)
T ss_pred CCccCCCceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECC
Confidence 55555567789999887778899999999999999999999999999999999988765445688999999999999999
Q ss_pred CCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccccc
Q 018382 81 EVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAP 160 (357)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~ 160 (357)
++++|++||+|++.+...+||.|..|.+|.++.|....+...+.+..|....|+|+||++++.+.++++|+++++++++.
T Consensus 81 ~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~ 160 (357)
T PLN02514 81 DVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAP 160 (357)
T ss_pred CcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhh
Confidence 99999999999877777789999999999999998764433322333444679999999999999999999999999999
Q ss_pred ccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH
Q 018382 161 LLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240 (357)
Q Consensus 161 ~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~ 240 (357)
+++.+.|||.++......++|++|+|+|+|++|++++|+|+..|++|++++++++++..+.+++|++++++..+.+.+.+
T Consensus 161 l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~ 240 (357)
T PLN02514 161 LLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE 240 (357)
T ss_pred hhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence 99999999999988777689999999999999999999999999999999988888777766699998887665544555
Q ss_pred hhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382 241 AADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320 (357)
Q Consensus 241 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~ 320 (357)
...++|++||++|....+..++++++++|+++.+|.......+....++.++.++.|++....++++++++++.++.+++
T Consensus 241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~ 320 (357)
T PLN02514 241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTS 320 (357)
T ss_pred hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcC
Confidence 55689999999997557889999999999999999875555666777788999999999988889999999999999987
Q ss_pred cEEEeecccHHHHHHHHHcCCccEEEEEecCCCcCCC
Q 018382 321 MIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLDP 357 (357)
Q Consensus 321 ~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~~~~~ 357 (357)
.+++|+++|+.+||+.+++++..||+++.++.+.+|.
T Consensus 321 ~i~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~~~~~~ 357 (357)
T PLN02514 321 MIEVVKMDYVNTAFERLEKNDVRYRFVVDVAGSNLDA 357 (357)
T ss_pred cEEEEcHHHHHHHHHHHHcCCCceeEEEEccccccCC
Confidence 7788999999999999999999999999998887763
No 7
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=5.6e-54 Score=400.87 Aligned_cols=345 Identities=51% Similarity=0.971 Sum_probs=295.1
Q ss_pred hhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCC
Q 018382 7 ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFK 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~ 86 (357)
+.++.++...++++.+...+++.|+|+++||+||+.++++|++|++++.|.++...+|.++|||++|+|+++|+++++|+
T Consensus 4 ~~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~ 83 (375)
T PLN02178 4 QNKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFK 83 (375)
T ss_pred cceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccC
Confidence 45567777777778898899999999999999999999999999999988764445688999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382 87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV 166 (357)
Q Consensus 87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ 166 (357)
+||||++.+....||.|..|+.|.++.|+...+........|...+|+|+||++++++.++++|+++++++++++++.+.
T Consensus 84 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ 163 (375)
T PLN02178 84 EGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGI 163 (375)
T ss_pred CCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccch
Confidence 99999766666679999999999999999865432211112333479999999999999999999999999999999999
Q ss_pred hhhhhhhccCC-CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHHHhcCCcEEEcCCChhHHHHhhCC
Q 018382 167 TVFSPLSHFGL-KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAMEHLGADQYLVSSDATRMQEAADS 244 (357)
Q Consensus 167 ta~~~l~~~~~-~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~~~ 244 (357)
|+|+++..... .++|++|+|.|+|++|++++|+|+..|++|+++++++++ .+.+++ +|++++++..+.+.+.+...+
T Consensus 164 ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~-lGa~~~i~~~~~~~v~~~~~~ 242 (375)
T PLN02178 164 TVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDR-LGADSFLVTTDSQKMKEAVGT 242 (375)
T ss_pred HHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHh-CCCcEEEcCcCHHHHHHhhCC
Confidence 99999876654 268999999999999999999999999999998877665 445544 999999987665445555557
Q ss_pred ccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEE
Q 018382 245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEV 324 (357)
Q Consensus 245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~ 324 (357)
+|+|||++|....+..++++++++|+++.+|.......++...++.+++++.|++.+..++++++++++.+|++++.+++
T Consensus 243 ~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i~~ 322 (375)
T PLN02178 243 MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIEL 322 (375)
T ss_pred CcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCcccEEE
Confidence 99999999987567899999999999999987655555677777889999999998888899999999999999988888
Q ss_pred eecccHHHHHHHHHcCCccEEEEEecCC
Q 018382 325 IKMDYVNKAFERLEKNDVRYRFVVDVAG 352 (357)
Q Consensus 325 ~~~~~~~~a~~~~~~~~~~Gkvvi~~~~ 352 (357)
|+|+|+++||+.+++++..||+++++.+
T Consensus 323 ~~l~~~~~A~~~~~~~~~~gkvvi~~~~ 350 (375)
T PLN02178 323 IKMSDINSAMDRLAKSDVRYRFVIDVAN 350 (375)
T ss_pred EeHHHHHHHHHHHHcCCCceEEEEEecc
Confidence 9999999999999999999999999843
No 8
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.4e-52 Score=355.72 Aligned_cols=341 Identities=24% Similarity=0.348 Sum_probs=297.8
Q ss_pred hhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCC
Q 018382 6 TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNF 85 (357)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~ 85 (357)
.+.+++|-+.+++.++|.++|+.+++|+.+||+||+.++++||+|...+.|..+...+|.+||||.+|+|+.+|+.|+++
T Consensus 4 kvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~v 83 (375)
T KOG0022|consen 4 KVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTV 83 (375)
T ss_pred CceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcccc
Confidence 36778888888889999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred CCCCEEEEccccCCCCCCcccccCcccccccccccC--ccccCCCCCC-------------CCccceEEEeeCcceEECC
Q 018382 86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSY--NDVYTDGKPT-------------QGGFAESMVVDQKFVVKIP 150 (357)
Q Consensus 86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-------------~G~~~~~~~v~~~~~~~lP 150 (357)
++||+| +..+.++||.|..|+.+..|.|.+..... ..+.+||..+ ..+|+||.+++...+++++
T Consensus 84 k~GD~V-iplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId 162 (375)
T KOG0022|consen 84 KPGDHV-IPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID 162 (375)
T ss_pred CCCCEE-eeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence 999999 77889999999999999999999887554 2333344222 2499999999999999999
Q ss_pred CCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEE
Q 018382 151 DGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQY 229 (357)
Q Consensus 151 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v 229 (357)
+..+++.++.+.|..+|.|.|..+.+.++||+++.|.|.|++|+++++-|+..|+ +++.++-+++|.+.+++ ||+++.
T Consensus 163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~-fGaTe~ 241 (375)
T KOG0022|consen 163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKE-FGATEF 241 (375)
T ss_pred CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHh-cCccee
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999 999999
Q ss_pred EcCCCh-----hHHHHhhC-CccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCCccc--chHHHhhccceEEEEee
Q 018382 230 LVSSDA-----TRMQEAAD-SLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTPMQF--LTPMVMLGRKAITGSFI 300 (357)
Q Consensus 230 v~~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~--~~~~~~~~~~~i~g~~~ 300 (357)
+|..+. +.+.++++ |+|+-|||+|....+++++.+...+ |+-|.+|.......+ ..+.+ ....++.|+..
T Consensus 242 iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l-~~GR~~~Gs~F 320 (375)
T KOG0022|consen 242 INPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQL-VTGRTWKGSAF 320 (375)
T ss_pred cChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhh-ccccEEEEEec
Confidence 998752 34555655 8999999999998899999999998 999999987655443 33333 45778888887
Q ss_pred cC---HHHHHHHHHHHHhcCCC--ccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 301 GS---MKETKEMLEFCREKGVT--SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 301 ~~---~~~~~~~~~~~~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
+. +.+++.+.+...++.+. ..| |+++|++|++||++|.+++.. |.|+.+
T Consensus 321 GG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 321 GGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred ccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence 64 46677777777778665 467 999999999999999999987 877753
No 9
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=8.9e-51 Score=376.39 Aligned_cols=333 Identities=18% Similarity=0.275 Sum_probs=278.3
Q ss_pred hhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHh-cCCC--CCCCCCccCccccEEEEEeCCCCC
Q 018382 7 ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIK-NDLG--MSNYPMVPGHEVVGEVKEVGSEVS 83 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~-g~~~--~~~~p~~lG~e~~G~V~~vG~~v~ 83 (357)
..++++.++. +++.+++++++.| +.++|||||+.++++|++|++++. |..+ ...+|.++|||++|+|+++ +++
T Consensus 2 ~~~~~~~~~~-~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~ 77 (343)
T PRK09880 2 QVKTQSCVVA-GKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSS 77 (343)
T ss_pred cccceEEEEe-cCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCc
Confidence 4567777776 6788999999997 689999999999999999999875 4332 2357899999999999999 788
Q ss_pred CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccc
Q 018382 84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLC 163 (357)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~ 163 (357)
+|++||||++.+. .+||.|.+|+.|.++.|+...+.+...+ ....+|+|+||++++++.++++|+++++++++ +..
T Consensus 78 ~~~vGdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~g~~~~--~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~ 153 (343)
T PRK09880 78 GLKEGQTVAINPS-KPCGHCKYCLSHNENQCTTMRFFGSAMY--FPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAE 153 (343)
T ss_pred cCCCCCEEEECCC-CCCcCChhhcCCChhhCCCcceeecccc--cCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhc
Confidence 9999999977654 5699999999999999987654211111 11247999999999999999999999997655 556
Q ss_pred hhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh-
Q 018382 164 AGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA- 241 (357)
Q Consensus 164 ~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~- 241 (357)
++.+||+++.+... .++++|+|+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|+++++++++.+..+..
T Consensus 154 ~~~~a~~al~~~~~-~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~~~~ 231 (343)
T PRK09880 154 PLAVAIHAAHQAGD-LQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE-MGADKLVNPQNDDLDHYKA 231 (343)
T ss_pred HHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH-cCCcEEecCCcccHHHHhc
Confidence 77899999988766 689999999999999999999999999 68999999999988887 999999988764432211
Q ss_pred -hCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382 242 -ADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320 (357)
Q Consensus 242 -~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~ 320 (357)
.+++|+|||++|....+..++++++++|+++.+|.......++...++.+++++.++..+ .+++++++++++++.+++
T Consensus 232 ~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~-~~~~~~~~~l~~~g~i~~ 310 (343)
T PRK09880 232 EKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRF-TEEFNTAVSWLANGVINP 310 (343)
T ss_pred cCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeec-cccHHHHHHHHHcCCCCc
Confidence 236999999999865788999999999999999976555566777788899999998765 467899999999999986
Q ss_pred --cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 321 --MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 321 --~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
.+ ++|+++|+++|++.+++++..||+++.+
T Consensus 311 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 311 LPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred hhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 56 8999999999999999988889999864
No 10
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2e-50 Score=371.39 Aligned_cols=315 Identities=29% Similarity=0.480 Sum_probs=276.4
Q ss_pred CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCC
Q 018382 20 GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGC 99 (357)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (357)
..++++++|.|.|+++||+||+.++++|++|++++.|.++...+|.++|||++|+|+++|+++++|++||+|++.+....
T Consensus 13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 92 (329)
T TIGR02822 13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRT 92 (329)
T ss_pred CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCc
Confidence 46889999999999999999999999999999999987654445789999999999999999999999999988777778
Q ss_pred CCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCC
Q 018382 100 CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ 179 (357)
Q Consensus 100 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~ 179 (357)
|+.|..|..|.++.|+...+. |...+|+|+||+.++++.++++|+++++++++.+++.+.|||+++.. ..++
T Consensus 93 c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~ 164 (329)
T TIGR02822 93 CGVCRYCRRGAENLCPASRYT-------GWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLP 164 (329)
T ss_pred CCCChHHhCcCcccCCCcccC-------CcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCC
Confidence 999999999999999876532 33457999999999999999999999999999999999999999976 4559
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChH
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLE 259 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 259 (357)
+|++|||+|+|++|++++|+|+..|++|+++++++++.+.+++ +|++++++..+.. .+++|+++++.+....+.
T Consensus 165 ~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~-~Ga~~vi~~~~~~-----~~~~d~~i~~~~~~~~~~ 238 (329)
T TIGR02822 165 PGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLALA-LGAASAGGAYDTP-----PEPLDAAILFAPAGGLVP 238 (329)
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH-hCCceeccccccC-----cccceEEEECCCcHHHHH
Confidence 9999999999999999999999999999999999999888877 9999998754321 247899998887766788
Q ss_pred HHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEEeecccHHHHHHHHH
Q 018382 260 PYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLE 338 (357)
Q Consensus 260 ~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~a~~~~~ 338 (357)
.++++++++|+++.+|.... ...++...++.+++++.++.....+++.++++++.+++++...++|+|+|+++||+.++
T Consensus 239 ~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i~~~~~l~~~~~A~~~~~ 318 (329)
T TIGR02822 239 PALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRVTTHTYPLSEADRALRDLK 318 (329)
T ss_pred HHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeEEEEEeHHHHHHHHHHHH
Confidence 99999999999999997533 23455666778899999998877788999999999999974338999999999999999
Q ss_pred cCCccEEEEE
Q 018382 339 KNDVRYRFVV 348 (357)
Q Consensus 339 ~~~~~Gkvvi 348 (357)
+++..||+|+
T Consensus 319 ~~~~~Gkvvl 328 (329)
T TIGR02822 319 AGRFDGAAVL 328 (329)
T ss_pred cCCCceEEEe
Confidence 9999999987
No 11
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=8.9e-51 Score=370.06 Aligned_cols=308 Identities=26% Similarity=0.385 Sum_probs=263.7
Q ss_pred heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcC-CCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382 9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKND-LGMSNYPMVPGHEVVGEVKEVGSEVSNFKV 87 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~-~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (357)
+...+...+++..++++|+|.|.|++|||||||+++++||.|+.+++|. .+..++|.++|.|++|+|+++|++|++|++
T Consensus 2 ka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~ 81 (326)
T COG0604 2 KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKV 81 (326)
T ss_pred eEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcCC
Confidence 3445555566666889999999999999999999999999999999997 345568999999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382 88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT 167 (357)
Q Consensus 88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t 167 (357)
||||+... . ....|+|+||++++++.++++|+++|+++||++++.++|
T Consensus 82 GdrV~~~~--~------------------------------~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~T 129 (326)
T COG0604 82 GDRVAALG--G------------------------------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLT 129 (326)
T ss_pred CCEEEEcc--C------------------------------CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHH
Confidence 99997541 0 015799999999999999999999999999999999999
Q ss_pred hhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---hC
Q 018382 168 VFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---AD 243 (357)
Q Consensus 168 a~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~~ 243 (357)
||++|.....+++|++|||+|+ |++|.+++|+||.+|++++++++++++.+.+++ +|+++++++++.++.+++ ++
T Consensus 130 A~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~-lGAd~vi~y~~~~~~~~v~~~t~ 208 (326)
T COG0604 130 AWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKE-LGADHVINYREEDFVEQVRELTG 208 (326)
T ss_pred HHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHh-cCCCEEEcCCcccHHHHHHHHcC
Confidence 9999999888899999999985 999999999999999988888888888886666 999999998886654444 43
Q ss_pred --CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--CcccchHHHhhccceEEEEeecCH------HHHHHHHHHH
Q 018382 244 --SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFLTPMVMLGRKAITGSFIGSM------KETKEMLEFC 313 (357)
Q Consensus 244 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~~------~~~~~~~~~~ 313 (357)
++|+|||++|+. .+..++++|+++|+++.+|...+ ...++...++.+.++..+...... +.++++++++
T Consensus 209 g~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~ 287 (326)
T COG0604 209 GKGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLL 287 (326)
T ss_pred CCCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHH
Confidence 699999999998 88899999999999999998773 234556667778888888887644 5667899999
Q ss_pred HhcCCCccE-EEeecccHHHHHHHHHc-CCccEEEEEec
Q 018382 314 REKGVTSMI-EVIKMDYVNKAFERLEK-NDVRYRFVVDV 350 (357)
Q Consensus 314 ~~~~l~~~i-~~~~~~~~~~a~~~~~~-~~~~Gkvvi~~ 350 (357)
.+|.+++.+ ++|+++|..++..+... ++..||+|+++
T Consensus 288 ~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 288 ASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 999999999 89999996655554443 58889999974
No 12
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=4.8e-50 Score=371.19 Aligned_cols=329 Identities=24% Similarity=0.372 Sum_probs=280.7
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKVG 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (357)
|+++++. +++.+++++++.|+|+++||+||+.++++|++|++.+.+.... ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 mka~~~~-~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFP-GDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEe-cCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 4667765 5678999999999999999999999999999999998776432 2357899999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382 89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV 168 (357)
Q Consensus 89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta 168 (357)
|+|++.+. ..||.|..|+.|.++.|..... ..|...+|+|+||+.++.+.++++|+++++++|+++++++.||
T Consensus 80 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~------~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta 152 (339)
T cd08239 80 DRVMVYHY-VGCGACRNCRRGWMQLCTSKRA------AYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTA 152 (339)
T ss_pred CEEEECCC-CCCCCChhhhCcCcccCcCccc------ccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHH
Confidence 99976544 4699999999999999986543 1233468999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChh--HHHHhhC--
Q 018382 169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDAT--RMQEAAD-- 243 (357)
Q Consensus 169 ~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~~~~-- 243 (357)
|+++..+.. ++|++|||+|+|++|++++|+|+..|++ |+++++++++.+.+++ +|+++++++++.+ .+.++..
T Consensus 153 ~~~l~~~~~-~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~ 230 (339)
T cd08239 153 YHALRRVGV-SGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKA-LGADFVINSGQDDVQEIRELTSGA 230 (339)
T ss_pred HHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEEcCCcchHHHHHHHhCCC
Confidence 999977654 8899999999999999999999999998 9999999999888877 9999999887643 2223332
Q ss_pred CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccc-hHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--
Q 018382 244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFL-TPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS-- 320 (357)
Q Consensus 244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~-- 320 (357)
++|++||++|+...+..++++++++|+++.+|..... .+. ...++.+++++.+++....++++++++++.++.+++
T Consensus 231 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~ 309 (339)
T cd08239 231 GADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDR 309 (339)
T ss_pred CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhH
Confidence 7999999999875567889999999999999875442 333 245678999999999888889999999999999875
Q ss_pred cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 321 MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 321 ~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
.+ ++|+++++++||+.++++. .||+++++
T Consensus 310 ~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 310 LVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred eEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 56 8999999999999998876 69999864
No 13
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=5.9e-50 Score=374.68 Aligned_cols=327 Identities=26% Similarity=0.437 Sum_probs=277.3
Q ss_pred CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccC
Q 018382 19 SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVG 98 (357)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 98 (357)
++.+++++++.|+|+++||+||+.++++|++|++++.|..+ ..+|.++|||++|+|+++|+++++|++||||++.+ ..
T Consensus 18 ~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~-~~ 95 (371)
T cd08281 18 SRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVF-VP 95 (371)
T ss_pred CCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCCCCcCCCCCEEEEcc-CC
Confidence 46788999999999999999999999999999999998764 34688999999999999999999999999997644 34
Q ss_pred CCCCCcccccCcccccccccccC-ccccCCC-------------CCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382 99 CCRNCRPCEADVEQYCNKKIWSY-NDVYTDG-------------KPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA 164 (357)
Q Consensus 99 ~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~ 164 (357)
.||.|..|+.|.++.|....... .+....| ....|+|+||+.++++.++++|+++++++|+.++++
T Consensus 96 ~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~ 175 (371)
T cd08281 96 SCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCA 175 (371)
T ss_pred CCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcch
Confidence 69999999999999998754221 1110000 112489999999999999999999999999999999
Q ss_pred hhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh--
Q 018382 165 GVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA-- 241 (357)
Q Consensus 165 ~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-- 241 (357)
+.|||.++.....+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|+++++++.+.+..+++
T Consensus 176 ~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~-~Ga~~~i~~~~~~~~~~i~~ 254 (371)
T cd08281 176 VLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-LGATATVNAGDPNAVEQVRE 254 (371)
T ss_pred HHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH-cCCceEeCCCchhHHHHHHH
Confidence 99999998776677999999999999999999999999999 69999999999888877 999999988765544433
Q ss_pred -h-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--CcccchHHHhhccceEEEEeecC---HHHHHHHHHHHH
Q 018382 242 -A-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFLTPMVMLGRKAITGSFIGS---MKETKEMLEFCR 314 (357)
Q Consensus 242 -~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~ 314 (357)
. +++|++|||+|....+..++++++++|+++.+|.... ...++...++.+++++.|++.+. .++++.+++++.
T Consensus 255 ~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~ 334 (371)
T cd08281 255 LTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYL 334 (371)
T ss_pred HhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHH
Confidence 2 3799999999976578899999999999999987643 24566667888999999988753 467899999999
Q ss_pred hcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382 315 EKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 315 ~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi 348 (357)
+++++. .+ ++|+++|+++||+.+++++..||+++
T Consensus 335 ~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 335 SGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred cCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 999975 46 89999999999999999998888763
No 14
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.8e-49 Score=372.37 Aligned_cols=342 Identities=25% Similarity=0.363 Sum_probs=282.4
Q ss_pred hhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCC
Q 018382 5 DTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVS 83 (357)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~ 83 (357)
+.|++|+++++.++++++.+++++.|+|+++||+||+.++++|++|++.+.|..+ ...+|.++|||++|+|+++|++++
T Consensus 6 ~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~ 85 (381)
T PLN02740 6 GKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVE 85 (381)
T ss_pred ccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCC
Confidence 3467899998876555688899999999999999999999999999999988754 335688999999999999999999
Q ss_pred CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccc--cCCC---------------CCCCCccceEEEeeCcce
Q 018382 84 NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDV--YTDG---------------KPTQGGFAESMVVDQKFV 146 (357)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~---------------~~~~G~~~~~~~v~~~~~ 146 (357)
+|++||||++.+ ..+||.|.+|..+.++.|+......... ...| ....|+|+||++++.+.+
T Consensus 86 ~~~vGdrV~~~~-~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~ 164 (381)
T PLN02740 86 DLKAGDHVIPIF-NGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV 164 (381)
T ss_pred cCCCCCEEEecC-CCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence 999999997654 4579999999999999998864221100 0000 012699999999999999
Q ss_pred EECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC
Q 018382 147 VKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG 225 (357)
Q Consensus 147 ~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g 225 (357)
+++|+++++++++.+++++.|||+++.....+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|
T Consensus 165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~-~G 243 (381)
T PLN02740 165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE-MG 243 (381)
T ss_pred EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH-cC
Confidence 99999999999999999999999988776677999999999999999999999999999 69999999999998877 99
Q ss_pred CcEEEcCCCh--hH---HHHhhC-CccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCCc--ccchHHHhhccceEE
Q 018382 226 ADQYLVSSDA--TR---MQEAAD-SLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTPM--QFLTPMVMLGRKAIT 296 (357)
Q Consensus 226 ~~~vv~~~~~--~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~ 296 (357)
++++++.++. +. +.++.. ++|++||++|....+..++++++++ |+++.+|...... .+.... +.++.++.
T Consensus 244 a~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~-~~~~~~i~ 322 (381)
T PLN02740 244 ITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPME-LFDGRSIT 322 (381)
T ss_pred CcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHH-HhcCCeEE
Confidence 9999987652 22 333333 7999999999865788999999996 9999999765432 233222 34678999
Q ss_pred EEeecC---HHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 297 GSFIGS---MKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 297 g~~~~~---~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
|+..+. ..+++++++++.++.++. .+ ++|+|+|+++|++.+.+++. .|++|++
T Consensus 323 g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 323 GSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred EEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence 887654 357889999999998865 56 89999999999999988876 5998864
No 15
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=2.3e-49 Score=369.08 Aligned_cols=337 Identities=25% Similarity=0.402 Sum_probs=280.9
Q ss_pred heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382 9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (357)
+|+++++...++++++++++.|+|+++||+||+.++++|++|++++.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 467777765556789999999999999999999999999999999988754 2468899999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCcccccccccccCccc-cCCCC-----CCCCccceEEEeeCcceEECCCCCCcccccccc
Q 018382 89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDV-YTDGK-----PTQGGFAESMVVDQKFVVKIPDGMALEQAAPLL 162 (357)
Q Consensus 89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~ 162 (357)
|||++.+. ..||.|..|..|.+++|.......... ..+|. ...|+|+||+.++++.++++|+++++++|+.++
T Consensus 80 drV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~ 158 (358)
T TIGR03451 80 DYVVLNWR-AVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLG 158 (358)
T ss_pred CEEEEccC-CCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhc
Confidence 99977654 469999999999999997532111000 00111 136999999999999999999999999999999
Q ss_pred chhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH--
Q 018382 163 CAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ-- 239 (357)
Q Consensus 163 ~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~-- 239 (357)
+.+.++|.++.....+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|+++++++++.+..+
T Consensus 159 ~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~i 237 (358)
T TIGR03451 159 CGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWARE-FGATHTVNSSGTDPVEAI 237 (358)
T ss_pred ccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceEEcCCCcCHHHHH
Confidence 9999999888777777999999999999999999999999999 59999999999888877 9999999887654433
Q ss_pred -HhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC--cccchHHHhhccceEEEEeec---CHHHHHHHHH
Q 018382 240 -EAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFIG---SMKETKEMLE 311 (357)
Q Consensus 240 -~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~ 311 (357)
+... ++|++|||+|....+..++++++++|+++.+|..... ..++...++.++.++.+++.. ..++++++++
T Consensus 238 ~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 317 (358)
T TIGR03451 238 RALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVD 317 (358)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHH
Confidence 3333 6999999999865788999999999999999976542 345566677889999988653 3578899999
Q ss_pred HHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 312 FCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 312 ~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
+++++.+++ .+ ++|+++|+++||+.+++++.. |+++.
T Consensus 318 l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 318 LYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 999999975 46 899999999999999988775 77764
No 16
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.5e-49 Score=370.55 Aligned_cols=340 Identities=21% Similarity=0.299 Sum_probs=281.7
Q ss_pred hhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCC
Q 018382 6 TERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNF 85 (357)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~ 85 (357)
...+|+++++.+++..++++++++|+|+++||+||+.++++|++|++.+.+.. .+|.++|||++|+|+++|+++++|
T Consensus 9 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~ 85 (378)
T PLN02827 9 NVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEF 85 (378)
T ss_pred ccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCccc
Confidence 34578888888666678999999999999999999999999999999887642 457899999999999999999999
Q ss_pred CCCCEEEEccccCCCCCCcccccCcccccccccccCcccc---------CCCC-----CCCCccceEEEeeCcceEECCC
Q 018382 86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVY---------TDGK-----PTQGGFAESMVVDQKFVVKIPD 151 (357)
Q Consensus 86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-----~~~G~~~~~~~v~~~~~~~lP~ 151 (357)
++||||++.+. ..||+|.+|..|.++.|+.......+.. ..|. ...|+|+||+.+++..++++|+
T Consensus 86 ~~GdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~ 164 (378)
T PLN02827 86 EKGDHVLTVFT-GECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDP 164 (378)
T ss_pred CCCCEEEEecC-CCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCC
Confidence 99999976644 4799999999999999987532111110 0110 1358999999999999999999
Q ss_pred CCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEE
Q 018382 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYL 230 (357)
Q Consensus 152 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv 230 (357)
++++++++.+++++.++|.++.....+++|++|||+|+|++|++++|+|+..|+ .|+++++++++.+.+++ +|+++++
T Consensus 165 ~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~-lGa~~~i 243 (378)
T PLN02827 165 LAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKT-FGVTDFI 243 (378)
T ss_pred CCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCCcEEE
Confidence 999999999999989999877666667999999999999999999999999999 57777778888888877 9999999
Q ss_pred cCCCh--hH---HHHhhC-CccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCCcccch-HHHhhccceEEEEeecC
Q 018382 231 VSSDA--TR---MQEAAD-SLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTPMQFLT-PMVMLGRKAITGSFIGS 302 (357)
Q Consensus 231 ~~~~~--~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~~~ 302 (357)
++++. +. +.++.. ++|+|||++|....+..+++.++++ |+++.+|.......+.. ..++.+++++.|+....
T Consensus 244 ~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 323 (378)
T PLN02827 244 NPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGG 323 (378)
T ss_pred cccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCC
Confidence 87652 22 333333 7999999999865688999999998 99999998654433333 34677899999987653
Q ss_pred ---HHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382 303 ---MKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDVA 351 (357)
Q Consensus 303 ---~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~ 351 (357)
.++++.+++++.++++++ .+ ++|+|+++++||+.+++++. +|+||.+.
T Consensus 324 ~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 324 WKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred CchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 357889999999999997 67 89999999999999999887 69999764
No 17
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1.2e-48 Score=365.07 Aligned_cols=337 Identities=21% Similarity=0.302 Sum_probs=275.1
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
|+++.....++.++++++|.|+|.++||+||+.++++|++|++++.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 56777666667899999999999999999999999999999999998776556789999999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCccccccccccc-CccccC--------CC-----CCCCCccceEEEeeCcceEECCCCCCc
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWS-YNDVYT--------DG-----KPTQGGFAESMVVDQKFVVKIPDGMAL 155 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~--------~~-----~~~~G~~~~~~~v~~~~~~~lP~~l~~ 155 (357)
||++.+ ...||+|.+|..|.++.|+..... +.+... +| ....|+|+||++++++.++++|+++++
T Consensus 82 rV~~~~-~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLY-TAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcC-CCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 997654 457999999999999999874311 011110 11 012479999999999999999999999
Q ss_pred cccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCC
Q 018382 156 EQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSD 234 (357)
Q Consensus 156 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~ 234 (357)
++++++++++.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|++++++.++
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~-~Ga~~~i~~~~ 239 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKK-LGATDCVNPND 239 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCCeEEcccc
Confidence 99999999999999998776677999999999999999999999999999 79999999999888877 99999998763
Q ss_pred --h---hHHHHhhC-CccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCC--cccchHHHhhccceEEEEeec---C
Q 018382 235 --A---TRMQEAAD-SLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTP--MQFLTPMVMLGRKAITGSFIG---S 302 (357)
Q Consensus 235 --~---~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~---~ 302 (357)
. +.+.+++. ++|++||++|....+..++++++++ |+++.+|..... ..+....++. ...+.++..+ .
T Consensus 240 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~ 318 (368)
T TIGR02818 240 YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFGGVKG 318 (368)
T ss_pred cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeeccCCCc
Confidence 2 22333333 7999999999865788899999886 999999875422 2333333333 3456776543 2
Q ss_pred HHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 303 MKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 303 ~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
..+++++++++.++.++. .+ ++|+|+|+++||+.+++++. +|++|++
T Consensus 319 ~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 319 RTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred HHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 457899999999998864 46 99999999999999988765 6999874
No 18
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=2.7e-48 Score=363.37 Aligned_cols=336 Identities=23% Similarity=0.333 Sum_probs=278.4
Q ss_pred heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382 9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (357)
+|+++++...+++++++++++|+|+++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (369)
T cd08301 2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG 81 (369)
T ss_pred ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence 56777776666779999999999999999999999999999999999877655678999999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCcccccccccccC-ccccC---------CC-----CCCCCccceEEEeeCcceEECCCCC
Q 018382 89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSY-NDVYT---------DG-----KPTQGGFAESMVVDQKFVVKIPDGM 153 (357)
Q Consensus 89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~-----~~~~G~~~~~~~v~~~~~~~lP~~l 153 (357)
|||++. ...+||.|..|..+.++.|....... .+... .| ....|+|+||+++++..++++|+++
T Consensus 82 drV~~~-~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 82 DHVLPV-FTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CEEEEc-cCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 999765 45579999999999999998754221 01000 01 0135899999999999999999999
Q ss_pred CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382 154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS 232 (357)
Q Consensus 154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~ 232 (357)
++++++++++.+.|||.++.....+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++.+++.
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~-~Ga~~~i~~ 239 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKK-FGVTEFVNP 239 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceEEcc
Confidence 9999999999999999988776777999999999999999999999999999 89999999999988877 999999887
Q ss_pred CC--hhH---HHHhhC-CccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCC--cccchHHHhhccceEEEEeecC-
Q 018382 233 SD--ATR---MQEAAD-SLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTP--MQFLTPMVMLGRKAITGSFIGS- 302 (357)
Q Consensus 233 ~~--~~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~- 302 (357)
.+ .+. +.++.. ++|++||++|....+..++++++++ |+++.+|..... ..+....+ .+++++.|++...
T Consensus 240 ~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~ 318 (369)
T cd08301 240 KDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL-LNGRTLKGTLFGGY 318 (369)
T ss_pred cccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHH-hcCCeEEEEecCCC
Confidence 64 222 333333 7999999999865678899999996 999999986543 23333333 3688999987643
Q ss_pred --HHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382 303 --MKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 303 --~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi 348 (357)
.++++++++++.++.++. .+ ++|+++|+++||+.+++++.. |+++
T Consensus 319 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 319 KPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred ChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 357889999999998764 46 899999999999999998874 8876
No 19
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=4.5e-48 Score=361.17 Aligned_cols=337 Identities=25% Similarity=0.394 Sum_probs=279.4
Q ss_pred hheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382 8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (357)
++++++++...+++++++++|.|.|.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 4677887776667799999999999999999999999999999999988765 456889999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCcccccccccccCccccCCC-------------CCCCCccceEEEeeCcceEECCCCCC
Q 018382 88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDG-------------KPTQGGFAESMVVDQKFVVKIPDGMA 154 (357)
Q Consensus 88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~G~~~~~~~v~~~~~~~lP~~l~ 154 (357)
||+|++. ...+|+.|..|..|.++.|++..+...+...++ ....|+|+||++++.+.++++|++++
T Consensus 80 GdrV~~~-~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~ 158 (365)
T cd08277 80 GDKVIPL-FIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP 158 (365)
T ss_pred CCEEEEC-CCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence 9999654 556899999999999999998654433322221 11358999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCC
Q 018382 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSS 233 (357)
Q Consensus 155 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~ 233 (357)
+++++++++++.|||+++.....+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++++++..
T Consensus 159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~~i~~~ 237 (365)
T cd08277 159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE-FGATDFINPK 237 (365)
T ss_pred HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCCcEeccc
Confidence 999999999999999988666677999999999999999999999999999 79999999999888877 9999998876
Q ss_pred Ch-----hHHHHhh-CCccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCC-CcccchHHHhhccceEEEEeecC---
Q 018382 234 DA-----TRMQEAA-DSLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGS--- 302 (357)
Q Consensus 234 ~~-----~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~--- 302 (357)
+. +.+.+.. .++|+|||++|....+..++++++++ |+++.+|...+ ...++...++. +.++.+++.+.
T Consensus 238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~ 316 (365)
T cd08277 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFKS 316 (365)
T ss_pred cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCCh
Confidence 42 2233333 37999999999765778899999885 99999987653 23444444443 78888887754
Q ss_pred HHHHHHHHHHHHhcCCC--ccE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 303 MKETKEMLEFCREKGVT--SMI-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 303 ~~~~~~~~~~~~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
..++.++++++.++.+. +.+ ++|+++|+++|++.+++++. .|+++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i~ 365 (365)
T cd08277 317 RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVIT 365 (365)
T ss_pred HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEeeC
Confidence 35788999999998765 456 89999999999999988874 688863
No 20
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=9.6e-48 Score=359.36 Aligned_cols=337 Identities=24% Similarity=0.323 Sum_probs=275.1
Q ss_pred heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382 9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (357)
+|+++.....+++++++++|.|+|+++||+||+.++++|++|++++.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 46677666666789999999999999999999999999999999999877655788999999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCccccccccccc-CccccCCC-------------CCCCCccceEEEeeCcceEECCCCCC
Q 018382 89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS-YNDVYTDG-------------KPTQGGFAESMVVDQKFVVKIPDGMA 154 (357)
Q Consensus 89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------------~~~~G~~~~~~~v~~~~~~~lP~~l~ 154 (357)
|||++. ....||.|.+|..+.++.|.+.... +.+...+| ....|+|+||+.++++.++++|++++
T Consensus 82 drV~~~-~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPL-YTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEc-CCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 999765 4467999999999999999865311 11111111 11357999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCC
Q 018382 155 LEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSS 233 (357)
Q Consensus 155 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~ 233 (357)
+++++.+++++.|||+++.....+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++++++++
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~-lGa~~~i~~~ 239 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKK-FGATDCVNPK 239 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCCEEEccc
Confidence 999999999999999998776677999999999999999999999999999 79999999999988876 9999999876
Q ss_pred Ch--hH---HHHhhC-CccEEEEcCCCCCChHHHHhccccC-CeEEEEccCCCC--cccchHHHhhccceEEEEeec---
Q 018382 234 DA--TR---MQEAAD-SLDYIIDTVPANHPLEPYLSLLKLD-GKLILTGVINTP--MQFLTPMVMLGRKAITGSFIG--- 301 (357)
Q Consensus 234 ~~--~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~--- 301 (357)
+. +. +.+++. ++|+|||++|....+..++++++++ |+++.+|..... .......++ ...++.++..+
T Consensus 240 ~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 318 (368)
T cd08300 240 DHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGGWK 318 (368)
T ss_pred ccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecccC
Confidence 53 22 333333 7999999999865788899999886 999999876422 222333333 23456665543
Q ss_pred CHHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 302 SMKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 302 ~~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
..++++++++++.++.+++ .+ ++|+|+|+++||+.+.+++. .|++++
T Consensus 319 ~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 319 SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 3467899999999999985 46 89999999999999988775 588874
No 21
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=6.9e-48 Score=357.88 Aligned_cols=321 Identities=24% Similarity=0.357 Sum_probs=273.9
Q ss_pred CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcC-CCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcccc
Q 018382 19 SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKND-LGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLV 97 (357)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~-~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (357)
+.+++++++|.|+|+++||+||+.++++|++|++.+.+. .+...+|.++|||++|+|+++|++++.+ +||+|++.+..
T Consensus 8 g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~ 86 (349)
T TIGR03201 8 GKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVI 86 (349)
T ss_pred CCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCC
Confidence 345888999999999999999999999999999987443 2234568899999999999999999887 99999766544
Q ss_pred CCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCC------CCCccccccccchhhhhhhh
Q 018382 98 GCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD------GMALEQAAPLLCAGVTVFSP 171 (357)
Q Consensus 98 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~------~l~~~~aa~~~~~~~ta~~~ 171 (357)
+||.|..|..|.++.|....+. |...+|+|+||+.++++.++++|+ ++++++++++++.+.++|++
T Consensus 87 -~cg~c~~c~~g~~~~c~~~~~~-------g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a 158 (349)
T TIGR03201 87 -PCGECELCKTGRGTICRAQKMP-------GNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQA 158 (349)
T ss_pred -CCCCChhhhCcCcccCCCCCcc-------CcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHH
Confidence 7999999999999999865432 233579999999999999999999 89999999999999999999
Q ss_pred hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh---hHH---HHhhC--
Q 018382 172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA---TRM---QEAAD-- 243 (357)
Q Consensus 172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~---~~~---~~~~~-- 243 (357)
+... .+++|++|+|+|+|++|++++|+|+..|++|+++++++++.+.+++ +|++++++..+. +.. ++++.
T Consensus 159 ~~~~-~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~~~~~t~~~ 236 (349)
T TIGR03201 159 AVQA-GLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKG-FGADLTLNPKDKSAREVKKLIKAFAKAR 236 (349)
T ss_pred HHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-hCCceEecCccccHHHHHHHHHhhcccC
Confidence 8764 4589999999999999999999999999999999999999988877 999999887653 222 23332
Q ss_pred Ccc----EEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC
Q 018382 244 SLD----YIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT 319 (357)
Q Consensus 244 ~~d----~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~ 319 (357)
++| +||||+|....+..++++++++|+++.+|.......++...++.++.++.+++....++++.++++++++.++
T Consensus 237 g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~ 316 (349)
T TIGR03201 237 GLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQ 316 (349)
T ss_pred CCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCC
Confidence 565 8999999875677889999999999999987655556666777788899999887778899999999999987
Q ss_pred c--cEEEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 320 S--MIEVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 320 ~--~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
+ .+++|+|+++++||+.+++++..||+++++
T Consensus 317 ~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 317 LGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred cccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence 5 458899999999999999999889998853
No 22
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=5.5e-48 Score=356.25 Aligned_cols=334 Identities=26% Similarity=0.355 Sum_probs=269.5
Q ss_pred eehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCC-ccCccccEEEEEeCCCCCCCCCCCE
Q 018382 12 GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPM-VPGHEVVGEVKEVGSEVSNFKVGDK 90 (357)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~-~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (357)
+...+.+.+...+++.+.|.+.++||+|||.++++|++|+++++|..+....+. ++|||++|+|+++| .++.|++|||
T Consensus 3 a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~Gdr 81 (350)
T COG1063 3 AAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDR 81 (350)
T ss_pred eeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCCCE
Confidence 344443444444677777778999999999999999999999999877666666 99999999999999 7788999999
Q ss_pred EEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEE-CCCCCCccccccccchhhhhh
Q 018382 91 VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVK-IPDGMALEQAAPLLCAGVTVF 169 (357)
Q Consensus 91 V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~-lP~~l~~~~aa~~~~~~~ta~ 169 (357)
|++.+. .+||.|.+|+.|.++.|++..+.+.... +...+|+|+||+.+|.+.+++ +|+++ ..+++++...+.+++
T Consensus 82 Vvv~~~-~~Cg~C~~C~~G~~~~C~~~~~~g~~~~--~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~ 157 (350)
T COG1063 82 VVVEPN-IPCGHCRYCRAGEYNLCENPGFYGYAGL--GGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAY 157 (350)
T ss_pred EEECCC-cCCCCChhHhCcCcccCCCccccccccc--cCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhh
Confidence 977655 4599999999999999995542222211 122689999999999765555 58888 667777888999997
Q ss_pred hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChh---HHHHhhC--
Q 018382 170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDAT---RMQEAAD-- 243 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~~~~-- 243 (357)
++........++.+|+|+|+|++|++++++++..|+ +|++++.+++|++.+++.+|++.+++..... .+.++++
T Consensus 158 ~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~ 237 (350)
T COG1063 158 HGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGR 237 (350)
T ss_pred hhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCC
Confidence 773333332566699999999999999999999998 8888899999999998866777777665422 2334444
Q ss_pred CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc-ccchHHHhhccceEEEEee-cCHHHHHHHHHHHHhcCCCc-
Q 018382 244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM-QFLTPMVMLGRKAITGSFI-GSMKETKEMLEFCREKGVTS- 320 (357)
Q Consensus 244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~~l~~- 320 (357)
++|++|||+|....+..+++.++++|+++.+|...... .++...++.+++++.|+.. ....+|+.+++++.+|++.+
T Consensus 238 g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~ 317 (350)
T COG1063 238 GADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPE 317 (350)
T ss_pred CCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChh
Confidence 69999999998767899999999999999999987665 5778889999999999965 55678999999999999987
Q ss_pred -cE-EEeecccHHHHHHHHHcCCc-cEEEEEec
Q 018382 321 -MI-EVIKMDYVNKAFERLEKNDV-RYRFVVDV 350 (357)
Q Consensus 321 -~i-~~~~~~~~~~a~~~~~~~~~-~Gkvvi~~ 350 (357)
.+ +.++++++++||+.+.+++. ..|+++.+
T Consensus 318 ~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 318 KLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred HceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 45 89999999999999988655 45888753
No 23
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=6.5e-48 Score=358.98 Aligned_cols=328 Identities=23% Similarity=0.307 Sum_probs=259.8
Q ss_pred eeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC---CCCCCccCccccEEEEEeCCCCCCCCC
Q 018382 11 IGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM---SNYPMVPGHEVVGEVKEVGSEVSNFKV 87 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (357)
+++++..+..+++++++|.|+|+++|||||++++++|++|++.++|.++. ..+|.++|||++|+|+++|++ ++|++
T Consensus 2 ka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~v 80 (355)
T cd08230 2 KAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSP 80 (355)
T ss_pred ceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCC
Confidence 45555433334889999999999999999999999999999999987542 245789999999999999999 99999
Q ss_pred CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382 88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT 167 (357)
Q Consensus 88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t 167 (357)
||||++.+ ...||+|..|+.|.++.|....+...+. ...+|+|+||++++++.++++|++++ + ++++..++.+
T Consensus 81 GdrV~~~~-~~~cg~C~~c~~g~~~~c~~~~~~~~g~----~~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p~~~ 153 (355)
T cd08230 81 GDLVVPTV-RRPPGKCLNCRIGRPDFCETGEYTERGI----KGLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEPLSV 153 (355)
T ss_pred CCEEEecc-ccCCCcChhhhCcCcccCCCcceeccCc----CCCCccceeEEEeccccEEECCCCCC-c-ceeecchHHH
Confidence 99997654 4469999999999999998754322211 12479999999999999999999999 4 4445555555
Q ss_pred hhhhhhcc------CCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeC---CcHHHHHHHHhcCCcEEEcCCChhHH
Q 018382 168 VFSPLSHF------GLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISS---SDKKRVEAMEHLGADQYLVSSDATRM 238 (357)
Q Consensus 168 a~~~l~~~------~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~---~~~~~~~~~~~~g~~~vv~~~~~~~~ 238 (357)
++.++... ...++|++|+|+|+|++|++++|+|+..|++|+++++ ++++.+.+++ +|+++ +++.+.+..
T Consensus 154 ~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~-~Ga~~-v~~~~~~~~ 231 (355)
T cd08230 154 VEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEE-LGATY-VNSSKTPVA 231 (355)
T ss_pred HHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCCEE-ecCCccchh
Confidence 44443221 1236899999999999999999999999999999987 5677777776 99987 455543322
Q ss_pred H-HhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--Ccccc----hHHHhhccceEEEEeecCHHHHHHHHH
Q 018382 239 Q-EAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFL----TPMVMLGRKAITGSFIGSMKETKEMLE 311 (357)
Q Consensus 239 ~-~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~~~~~i~g~~~~~~~~~~~~~~ 311 (357)
+ ....++|+|||++|....+..++++++++|+++.+|...+ ...++ ...++.+++++.|+...+.++++++++
T Consensus 232 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~ 311 (355)
T cd08230 232 EVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAVE 311 (355)
T ss_pred hhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHHH
Confidence 1 1234799999999986578899999999999999998665 23343 345678999999998888888999999
Q ss_pred HHHhcC------CCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 312 FCREKG------VTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 312 ~~~~~~------l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
++.++. +++.+ ++|+++|+.+||+.++++. +|+++++
T Consensus 312 ~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 312 DLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 999876 45567 8999999999999887654 5999864
No 24
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=5.6e-47 Score=349.80 Aligned_cols=331 Identities=32% Similarity=0.568 Sum_probs=290.0
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
|+++++..+++++++++++.|++.++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 46777765546899999999999999999999999999999999988765445688999999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF 169 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~ 169 (357)
+|++.+...+||+|..|..|.++.|..+... +....|++++|+.++...++++|+++++++++.+++.+.+||
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~-------~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~ 153 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKVT-------GVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTF 153 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCcc-------CcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHH
Confidence 9988777788999999999999999876432 223469999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh--CCccE
Q 018382 170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA--DSLDY 247 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~--~~~d~ 247 (357)
.++... .++++++|||+|+|++|++++++|+.+|++|+++++++++.+.+++ +|+++++++...+....+. .++|+
T Consensus 154 ~~~~~~-~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~d~ 231 (333)
T cd08296 154 NALRNS-GAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLARK-LGAHHYIDTSKEDVAEALQELGGAKL 231 (333)
T ss_pred HHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH-cCCcEEecCCCccHHHHHHhcCCCCE
Confidence 999777 6699999999999999999999999999999999999999888876 9999999887654433332 47999
Q ss_pred EEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEEeec
Q 018382 248 IIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKM 327 (357)
Q Consensus 248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~ 327 (357)
++|+.|....+..++++++++|+++.+|.......++...++.++.++.++..+..+++..+++++.++.+++.+++|++
T Consensus 232 vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~ 311 (333)
T cd08296 232 ILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMVETFPL 311 (333)
T ss_pred EEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCceEEEEEH
Confidence 99998755478899999999999999988765555666667789999999988777889999999999999877788999
Q ss_pred ccHHHHHHHHHcCCccEEEEEe
Q 018382 328 DYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 328 ~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
+++.+|++.+++++.+||+|++
T Consensus 312 ~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 312 EKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHHCCCCceeEEeC
Confidence 9999999999999999999874
No 25
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=5.7e-48 Score=320.82 Aligned_cols=314 Identities=22% Similarity=0.258 Sum_probs=272.1
Q ss_pred hhhhheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCC
Q 018382 5 DTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSN 84 (357)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~ 84 (357)
++..+...+.-.++...+++++.|.|+|.++|++||..|+|+|..|..+++|.+...+.|.++|.|.+|+|+++|+.+++
T Consensus 6 p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtd 85 (336)
T KOG1197|consen 6 PPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTD 85 (336)
T ss_pred CchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCccc
Confidence 34445556666777788999999999999999999999999999999999999977789999999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382 85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA 164 (357)
Q Consensus 85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~ 164 (357)
+++||||+.. +..|.|+|+..+|...++++|+.+++.+||++...
T Consensus 86 rkvGDrVayl-----------------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq 130 (336)
T KOG1197|consen 86 RKVGDRVAYL-----------------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQ 130 (336)
T ss_pred cccccEEEEe-----------------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHH
Confidence 9999999754 36899999999999999999999999999999999
Q ss_pred hhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC
Q 018382 165 GVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD 243 (357)
Q Consensus 165 ~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~ 243 (357)
++|||.-++++..+++|++||++.+ |++|+++.|+++..|+.++.+++++++.+.+++ .|++|.++++.+++++++..
T Consensus 131 ~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake-nG~~h~I~y~~eD~v~~V~k 209 (336)
T KOG1197|consen 131 GLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE-NGAEHPIDYSTEDYVDEVKK 209 (336)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh-cCCcceeeccchhHHHHHHh
Confidence 9999999999999999999999965 999999999999999999999999999999988 99999999999888776642
Q ss_pred -----CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcc-cchHHHhhccce-----EEEEeecCHHH---HHHH
Q 018382 244 -----SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ-FLTPMVMLGRKA-----ITGSFIGSMKE---TKEM 309 (357)
Q Consensus 244 -----~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~-----i~g~~~~~~~~---~~~~ 309 (357)
|+|+++|++|.. .+...+.+|++.|.+|.+|+.++..+ +++..+--+.++ +.|..-+..+. ..++
T Consensus 210 iTngKGVd~vyDsvG~d-t~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl 288 (336)
T KOG1197|consen 210 ITNGKGVDAVYDSVGKD-TFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARL 288 (336)
T ss_pred ccCCCCceeeeccccch-hhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHH
Confidence 899999999998 89999999999999999999876533 333333233333 22222222121 2567
Q ss_pred HHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCCCcC
Q 018382 310 LEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 355 (357)
Q Consensus 310 ~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~~~ 355 (357)
+.++.++.|+..| ++|||+++.+|+..+++++..||+++...++..
T Consensus 289 ~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~~~ 335 (336)
T KOG1197|consen 289 FALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPEKE 335 (336)
T ss_pred HHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcccc
Confidence 7788899999999 999999999999999999999999999877643
No 26
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.9e-46 Score=351.73 Aligned_cols=335 Identities=20% Similarity=0.260 Sum_probs=259.3
Q ss_pred eeeehccCCCCCcceeeeecCCCC-------CCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTG-------AEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEV 82 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~-------~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v 82 (357)
|+++++. +++.++++++|.|+|+ ++|||||+.++++|++|++++.|..+ ..+|.++|||++|+|+++|++|
T Consensus 3 mka~v~~-~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~V 80 (393)
T TIGR02819 3 NRGVVYL-GPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRDV 80 (393)
T ss_pred ceEEEEe-cCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCcc
Confidence 5666665 4667999999999874 68999999999999999999988654 3568999999999999999999
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCccccccccccc----CccccCCCCCCCCccceEEEeeCc--ceEECCCCCCc-
Q 018382 83 SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS----YNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMAL- 155 (357)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~- 155 (357)
++|++||||++.+. ..||.|..|+.|.++.|+..... +.+....+ ..+|+|+||++++.. .++++|++++.
T Consensus 81 ~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~-~~~G~~aey~~v~~~~~~l~~vP~~~~~~ 158 (393)
T TIGR02819 81 EFIKIGDIVSVPFN-IACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG-GWVGGQSEYVMVPYADFNLLKFPDRDQAL 158 (393)
T ss_pred ccccCCCEEEEecc-cCCCCChHHHCcCcccCcCCCCCCccceecccccC-CCCCceEEEEEechhhCceEECCCccccc
Confidence 99999999977655 45999999999999999964311 01110011 146999999999964 79999998754
Q ss_pred ---cccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEE-EeCCcHHHHHHHHhcCCcEEEc
Q 018382 156 ---EQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTV-ISSSDKKRVEAMEHLGADQYLV 231 (357)
Q Consensus 156 ---~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~-~~~~~~~~~~~~~~~g~~~vv~ 231 (357)
++++++.+.+.++|+++.. ..++++++|||.|+|++|++++|+|+..|+++++ +++++++.+.+++ +|++.+.+
T Consensus 159 ~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~-~Ga~~v~~ 236 (393)
T TIGR02819 159 EKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARS-FGCETVDL 236 (393)
T ss_pred ccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHH-cCCeEEec
Confidence 4567888889999999876 4558999999988899999999999999997554 4566778888877 99975433
Q ss_pred CCCh---hHHHHhhC--CccEEEEcCCCCC--------------ChHHHHhccccCCeEEEEccCC-CCc----------
Q 018382 232 SSDA---TRMQEAAD--SLDYIIDTVPANH--------------PLEPYLSLLKLDGKLILTGVIN-TPM---------- 281 (357)
Q Consensus 232 ~~~~---~~~~~~~~--~~d~v~d~~g~~~--------------~~~~~~~~l~~~G~~v~~g~~~-~~~---------- 281 (357)
..+. +.+.++.. ++|++||++|... .++.++++++++|+++.+|... +..
T Consensus 237 ~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~ 316 (393)
T TIGR02819 237 SKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTG 316 (393)
T ss_pred CCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccccccccccc
Confidence 3322 23344443 7999999999852 6889999999999999999853 111
Q ss_pred --ccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--cE--EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382 282 --QFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--MI--EVIKMDYVNKAFERLEKNDVRYRFVVDVA 351 (357)
Q Consensus 282 --~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~i--~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~ 351 (357)
++.....+.++.++.+......+.+.++++++.+++++. .+ ++|+|+|+++||+.+.+++. +|+++++.
T Consensus 317 ~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~Kvvi~~~ 391 (393)
T TIGR02819 317 SLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-KKFVIDPH 391 (393)
T ss_pred ccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-eEEEEeCC
Confidence 122334455666777644332233478999999999875 34 68999999999999988754 89999874
No 27
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.8e-46 Score=348.29 Aligned_cols=328 Identities=23% Similarity=0.354 Sum_probs=267.9
Q ss_pred eeeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (357)
|+++++.+ ++.+++.++|.|+| .++||+||+.++++|++|++.+.+... ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~-~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDT-DGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-HYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeC-CCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-CCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 35666553 55788999999998 699999999999999999975432211 2357899999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382 89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV 168 (357)
Q Consensus 89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta 168 (357)
|+|++.+.. .|+.|..|..|.++.|....+. |....|+|+||+.++++.++++|+++++++++.+. .+.++
T Consensus 79 d~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~ 149 (347)
T PRK10309 79 DAVACVPLL-PCFTCPECLRGFYSLCAKYDFI-------GSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVG 149 (347)
T ss_pred CEEEECCCc-CCCCCcchhCcCcccCCCccee-------ccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHH
Confidence 999877665 5999999999999999864332 33468999999999999999999999999998763 34557
Q ss_pred hhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChh--HHHHhh--C
Q 018382 169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDAT--RMQEAA--D 243 (357)
Q Consensus 169 ~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~~~--~ 243 (357)
|.++.. ..++++++|||+|+|++|++++|+|+..|++ |+++++++++.+.+++ +|++++++.++.. .+.+.. .
T Consensus 150 ~~~~~~-~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~~~~~ 227 (347)
T PRK10309 150 LHAFHL-AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKS-LGAMQTFNSREMSAPQIQSVLREL 227 (347)
T ss_pred HHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCCceEecCcccCHHHHHHHhcCC
Confidence 777644 4458999999999999999999999999996 7888888889888766 9999999876532 223332 2
Q ss_pred Ccc-EEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccc---hHHHhhccceEEEEeecC-----HHHHHHHHHHHH
Q 018382 244 SLD-YIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFL---TPMVMLGRKAITGSFIGS-----MKETKEMLEFCR 314 (357)
Q Consensus 244 ~~d-~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~ 314 (357)
++| ++|||+|....+..++++++++|+++.+|.......++ ...++.+++++.|++.+. .++++++++++.
T Consensus 228 ~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 307 (347)
T PRK10309 228 RFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLT 307 (347)
T ss_pred CCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHH
Confidence 688 99999998657889999999999999999765433322 235677899999987642 367899999999
Q ss_pred hcCCC--ccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 315 EKGVT--SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 315 ~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
++.++ +.+ ++|+|+|+++|++.+.+++..||+++++
T Consensus 308 ~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 308 ERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred cCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 99985 457 8999999999999999998889999976
No 28
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=7.3e-46 Score=342.90 Aligned_cols=336 Identities=52% Similarity=0.949 Sum_probs=296.6
Q ss_pred eehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEE
Q 018382 12 GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKV 91 (357)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V 91 (357)
+|........+++.++++|+|.++||+||+.++++|++|++.+.|......+|.++|||++|+|+++|+++++|++||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V 81 (337)
T cd05283 2 GYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRV 81 (337)
T ss_pred ceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCEE
Confidence 45555556789999999999999999999999999999999998876555668899999999999999999999999999
Q ss_pred EEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhh
Q 018382 92 GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSP 171 (357)
Q Consensus 92 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~ 171 (357)
++.+..+.|++|..|..+..++|+...+.+.+.+.++....|+|++|+.++.+.++++|+++++++++.+++.+.+||.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 161 (337)
T cd05283 82 GVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSP 161 (337)
T ss_pred EEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHH
Confidence 76777889999999999999999988766666555565668999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEc
Q 018382 172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDT 251 (357)
Q Consensus 172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~ 251 (357)
+.... ++++++|+|.|+|.+|++++++++..|++|+++++++++.+.+.+ +|++++++.+..+..+...+++|++|||
T Consensus 162 ~~~~~-~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~d~v~~~ 239 (337)
T cd05283 162 LKRNG-VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALK-LGADEFIATKDPEAMKKAAGSLDLIIDT 239 (337)
T ss_pred HHhcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-cCCcEEecCcchhhhhhccCCceEEEEC
Confidence 98776 599999999888999999999999999999999999888888866 9999998877655444455689999999
Q ss_pred CCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEEeecccHH
Q 018382 252 VPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVN 331 (357)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 331 (357)
++.......++++++++|+++.+|.......++...++.++.++.++.....++++.+++++.++.+++.+++|++++++
T Consensus 240 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (337)
T cd05283 240 VSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPWVEVIPMDGIN 319 (337)
T ss_pred CCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccceEEEEHHHHH
Confidence 99874588999999999999999876554455666667899999999988889999999999999998777899999999
Q ss_pred HHHHHHHcCCccEEEEEe
Q 018382 332 KAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 332 ~a~~~~~~~~~~Gkvvi~ 349 (357)
+||+.+++++..||+|++
T Consensus 320 ~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 320 EALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHcCCCcceEeeC
Confidence 999999999999999874
No 29
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.6e-46 Score=347.29 Aligned_cols=319 Identities=18% Similarity=0.191 Sum_probs=252.4
Q ss_pred heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC----CCCCCccCccccEEEEEeCCCCCC
Q 018382 9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM----SNYPMVPGHEVVGEVKEVGSEVSN 84 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~----~~~p~~lG~e~~G~V~~vG~~v~~ 84 (357)
+.+++++. +++.+++++++.|+ +++||||||+++|+|++|+++++|..+. ..+|.++|||++|+|+++|.+ +
T Consensus 2 ~~~~~~~~-~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLV-RPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEe-ccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 45666665 57789999999995 9999999999999999999999987532 357999999999999998875 7
Q ss_pred CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382 85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA 164 (357)
Q Consensus 85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~ 164 (357)
|++||||++.+... |+ |+.| +..+.|+...+. |...+|+|+||++++++.++++|+++++++|| +...
T Consensus 78 ~~vGdrV~~~~~~~-~~-~~~~--~~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~ 145 (341)
T cd08237 78 YKVGTKVVMVPNTP-VE-KDEI--IPENYLPSSRFR-------SSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTEL 145 (341)
T ss_pred cCCCCEEEECCCCC-ch-hccc--chhccCCCccee-------EecCCCceEEEEEEchHHeEECCCCCChHHhh-hhch
Confidence 99999998776554 76 4455 456788764432 22357999999999999999999999999877 4457
Q ss_pred hhhhhhhhhccC--CCCCCCeEEEEecChHHHHHHHHHHH-cC-CeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH
Q 018382 165 GVTVFSPLSHFG--LKQSGLRGGILGLGGVGHMGVLIAKA-MG-HHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240 (357)
Q Consensus 165 ~~ta~~~l~~~~--~~~~~~~VlI~G~g~~G~~ai~la~~-~g-~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~ 240 (357)
+.++|+++.... .+++|++|||+|+|++|++++|+++. .| .+|++++++++|++.+++ .++++.++ +..++
T Consensus 146 ~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~-~~~~~~~~----~~~~~ 220 (341)
T cd08237 146 VSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSF-ADETYLID----DIPED 220 (341)
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhh-cCceeehh----hhhhc
Confidence 788888885432 34789999999999999999999986 55 489999999888888876 77654332 11111
Q ss_pred hhCCccEEEEcCCC---CCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhc-
Q 018382 241 AADSLDYIIDTVPA---NHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREK- 316 (357)
Q Consensus 241 ~~~~~d~v~d~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~- 316 (357)
.++|+|||++|+ ...+..++++++++|+++.+|.......++...++.+++++.|+..++.++++++++++.++
T Consensus 221 --~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~ 298 (341)
T cd08237 221 --LAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNP 298 (341)
T ss_pred --cCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCC
Confidence 269999999995 33578899999999999999976544556666778899999999887778899999999998
Q ss_pred ----CCCccE-EEeeccc---HHHHHHHHHcCCccEEEEEecC
Q 018382 317 ----GVTSMI-EVIKMDY---VNKAFERLEKNDVRYRFVVDVA 351 (357)
Q Consensus 317 ----~l~~~i-~~~~~~~---~~~a~~~~~~~~~~Gkvvi~~~ 351 (357)
.+++.| ++|++++ +.+||+.+.++ ..||+||+++
T Consensus 299 ~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 299 EVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred cccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 466677 8999864 55555555444 6799999764
No 30
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=2.6e-45 Score=342.42 Aligned_cols=337 Identities=23% Similarity=0.353 Sum_probs=280.1
Q ss_pred eeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCC------
Q 018382 11 IGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSN------ 84 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~------ 84 (357)
+++++....+.+++++++.|.|+++||+||+.++++|++|++...|..+...+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 45555544458999999999999999999999999999999999887653467889999999999999999986
Q ss_pred CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc-ceEECCCCCCccccccccc
Q 018382 85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK-FVVKIPDGMALEQAAPLLC 163 (357)
Q Consensus 85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~-~~~~lP~~l~~~~aa~~~~ 163 (357)
|++||+|++. ...+|+.|..|+.+.++.|++..+.+.+....+....|+|++|+.++++ .++++|++++.++++++++
T Consensus 82 ~~~Gd~V~~~-~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~ 160 (361)
T cd08231 82 LKVGDRVTWS-VGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANC 160 (361)
T ss_pred cCCCCEEEEc-ccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcC
Confidence 9999999765 4447999999999999999987644322111112246999999999986 7999999999999999999
Q ss_pred hhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChh------
Q 018382 164 AGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDAT------ 236 (357)
Q Consensus 164 ~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~------ 236 (357)
+++|||+++.....++++++|||+|+|++|++++|+|+..|+ +|+++++++++...+++ +|++++++.++..
T Consensus 161 ~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~ 239 (361)
T cd08231 161 ALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELARE-FGADATIDIDELPDPQRRA 239 (361)
T ss_pred HHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCCeEEcCcccccHHHHH
Confidence 999999999988886799999999999999999999999999 99999999888888876 9999988776432
Q ss_pred HHHHhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC--cccchHHHhhccceEEEEeecCHHHHHHHHHH
Q 018382 237 RMQEAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFIGSMKETKEMLEF 312 (357)
Q Consensus 237 ~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 312 (357)
.+.+... ++|++||++|....+..++++++++|+++.+|..... ..+....++.++.++.++...+.+++++++++
T Consensus 240 ~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
T cd08231 240 IVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRF 319 (361)
T ss_pred HHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHHHH
Confidence 2333333 7999999998754688899999999999999876432 33444456788999999988777889999999
Q ss_pred HHhc--CC--CccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 313 CREK--GV--TSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 313 ~~~~--~l--~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
+.++ .+ .+.+ ++|+++++++||+.+++++. +|++|++
T Consensus 320 ~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 320 LERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred HHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 9887 43 3456 89999999999999988774 8999863
No 31
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=4.6e-45 Score=339.45 Aligned_cols=327 Identities=27% Similarity=0.404 Sum_probs=275.6
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC---C--------CCCCCCccCccccEEEEEe
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL---G--------MSNYPMVPGHEVVGEVKEV 78 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~---~--------~~~~p~~lG~e~~G~V~~v 78 (357)
|++|++. +++.+++++++.|+|.++||+||+.++++|++|++.+.+.. + ...+|.++|||++|+|+++
T Consensus 1 mka~~~~-~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYH-GRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEe-cCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 3566665 35679999999999999999999999999999998765421 1 1136789999999999999
Q ss_pred CCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCC-CCCCccceEEEeeCcceEECCCCCCccc
Q 018382 79 GSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGK-PTQGGFAESMVVDQKFVVKIPDGMALEQ 157 (357)
Q Consensus 79 G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~~~~v~~~~~~~lP~~l~~~~ 157 (357)
|+++++|++||+|++. ....|+.|..|.++.++.|....+. +. ..+|+|++|+.++.+.++++|+++++++
T Consensus 80 G~~v~~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~ 151 (351)
T cd08233 80 GSGVTGFKVGDRVVVE-PTIKCGTCGACKRGLYNLCDSLGFI-------GLGGGGGGFAEYVVVPAYHVHKLPDNVPLEE 151 (351)
T ss_pred CCCCCCCCCCCEEEEC-CCCCCCCChHHhCcCcccCCCCcee-------ccCCCCCceeeEEEechHHeEECcCCCCHHH
Confidence 9999999999999775 4447999999999999999865422 11 1379999999999999999999999999
Q ss_pred cccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChh
Q 018382 158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDAT 236 (357)
Q Consensus 158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~ 236 (357)
++.+ ..+.+||.++ ....++++++|+|+|+|.+|++++|+|+..|+ +|+++++++++.+.+.+ +|++.++++++.+
T Consensus 152 aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~~ 228 (351)
T cd08233 152 AALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEE-LGATIVLDPTEVD 228 (351)
T ss_pred hhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEECCCccC
Confidence 8866 6778999998 44556899999999999999999999999999 89999989888888876 9999999987755
Q ss_pred HHHHh---hC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHH
Q 018382 237 RMQEA---AD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLE 311 (357)
Q Consensus 237 ~~~~~---~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 311 (357)
..+++ .. ++|++||++|....+..++++++++|+++.+|.......++...++.+++++.+...+..++++++++
T Consensus 229 ~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 308 (351)
T cd08233 229 VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVID 308 (351)
T ss_pred HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHH
Confidence 44333 22 59999999987547889999999999999999876555667777788999999998777788999999
Q ss_pred HHHhcCCCc--cE-EEeecccH-HHHHHHHHcCCcc-EEEEE
Q 018382 312 FCREKGVTS--MI-EVIKMDYV-NKAFERLEKNDVR-YRFVV 348 (357)
Q Consensus 312 ~~~~~~l~~--~i-~~~~~~~~-~~a~~~~~~~~~~-Gkvvi 348 (357)
+++++.+++ .+ ++|+++|+ ++|++.+.+++.. ||++|
T Consensus 309 ~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 309 LLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred HHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 999999964 46 89999996 7999999998875 99987
No 32
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2.7e-43 Score=326.21 Aligned_cols=330 Identities=29% Similarity=0.436 Sum_probs=281.2
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNFK 86 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~ 86 (357)
|+++++...++++.+.+++.|++.++||+||+.++++|++|+....|.++ ...+|.++|+|++|+|+++|+++.+|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 35666654446788889999999999999999999999999999888664 345578899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382 87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV 166 (357)
Q Consensus 87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ 166 (357)
+||+|++.+.. .|+.|..|..|..++|+...+. |.+.+|+|++|+.++.++++++|++++++++++++..+.
T Consensus 81 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ 152 (340)
T cd05284 81 EGDPVVVHPPW-GCGTCRYCRRGEENYCENARFP-------GIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGL 152 (340)
T ss_pred CCCEEEEcCCC-CCCCChHHhCcCcccCCCCccc-------CccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHH
Confidence 99999776554 6999999999999999977654 334689999999999999999999999999999999999
Q ss_pred hhhhhhhcc-CCCCCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---h
Q 018382 167 TVFSPLSHF-GLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---A 241 (357)
Q Consensus 167 ta~~~l~~~-~~~~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~ 241 (357)
|||.++... ..+.++++|||+|+|.+|++++|+|+..| .+|+++++++++.+.+++ +|++++++++.. ...+ .
T Consensus 153 ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~-~~~~i~~~ 230 (340)
T cd05284 153 TAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAER-LGADHVLNASDD-VVEEVREL 230 (340)
T ss_pred HHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH-hCCcEEEcCCcc-HHHHHHHH
Confidence 999999876 45688999999999889999999999999 799999999888888866 999999987764 3333 3
Q ss_pred hC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC
Q 018382 242 AD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT 319 (357)
Q Consensus 242 ~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~ 319 (357)
.. ++|+++|++|+......++++++++|+++.+|.... ..++....+.++.++.++.....+.++.+++++.++.++
T Consensus 231 ~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~ 309 (340)
T cd05284 231 TGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVK 309 (340)
T ss_pred hCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCC
Confidence 32 699999999975478899999999999999986543 333344445788888888776678899999999999998
Q ss_pred ccEEEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 320 SMIEVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 320 ~~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
+.++.|+++++++|++.+++++..||+++.+
T Consensus 310 ~~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 310 VEITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred cceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 7668899999999999999999999999763
No 33
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=5.7e-44 Score=325.71 Aligned_cols=300 Identities=19% Similarity=0.237 Sum_probs=241.7
Q ss_pred heeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccc-cchHHHHhcCCCC---CCCCCccCccccEEEEEeCCCCCC
Q 018382 9 ATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGIC-HTDIHQIKNDLGM---SNYPMVPGHEVVGEVKEVGSEVSN 84 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~-~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~v~~ 84 (357)
+++++++. +++.+++++++.|+|+++|||||+.++++| ++|++++.|..+. ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~-~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLS-GPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEe-CCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 45677765 567899999999999999999999999996 6999999887653 3579999999999999999998 6
Q ss_pred CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382 85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA 164 (357)
Q Consensus 85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~ 164 (357)
|++||||++. |..|..|.. ...|+|+||++++++.++++|++++++. +++. .
T Consensus 79 ~~vGdrV~~~-----~~~c~~~~~---------------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~ 130 (308)
T TIGR01202 79 FRPGDRVFVP-----GSNCYEDVR---------------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-L 130 (308)
T ss_pred CCCCCEEEEe-----Ccccccccc---------------------ccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-H
Confidence 9999999752 333433221 1369999999999999999999999864 5444 4
Q ss_pred hhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC
Q 018382 165 GVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD 243 (357)
Q Consensus 165 ~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~ 243 (357)
..|||+++.... .++++|+|+|+|++|++++|+|+..|++ |+++..++++++.+.+ .+++|..+. ...
T Consensus 131 ~~~a~~~~~~~~--~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~----~~~i~~~~~-----~~~ 199 (308)
T TIGR01202 131 AATARHAVAGAE--VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG----YEVLDPEKD-----PRR 199 (308)
T ss_pred HHHHHHHHHhcc--cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh----ccccChhhc-----cCC
Confidence 689999987642 4688999999999999999999999997 4455555555544433 344544321 234
Q ss_pred CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--c
Q 018382 244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--M 321 (357)
Q Consensus 244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~ 321 (357)
++|+||||+|....++.++++++++|+++.+|.......++...++.+++++.++..+..++++++++++.++.+++ .
T Consensus 200 g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~ 279 (308)
T TIGR01202 200 DYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGL 279 (308)
T ss_pred CCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhc
Confidence 79999999998756889999999999999999865555566666778889999988887888999999999999986 4
Q ss_pred E-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 322 I-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 322 i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
+ ++|+|+|+++||+.+.++...+|++++
T Consensus 280 it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 280 ITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred cceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 6 899999999999988777777999874
No 34
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=3.7e-43 Score=332.50 Aligned_cols=323 Identities=17% Similarity=0.243 Sum_probs=256.5
Q ss_pred hheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHH-hcCC-CC-----CCCCCccCccccEEEEEeCC
Q 018382 8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQI-KNDL-GM-----SNYPMVPGHEVVGEVKEVGS 80 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~-~g~~-~~-----~~~p~~lG~e~~G~V~~vG~ 80 (357)
|+|+++...+ ++.++++++|.|+|+++||+||+.++++|++|++.+ .|.. +. ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~-~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYG-KGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEc-CCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 4678888774 557999999999999999999999999999999976 4532 11 24688999999999999999
Q ss_pred CCC-CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc----ceEECCCCCCc
Q 018382 81 EVS-NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK----FVVKIPDGMAL 155 (357)
Q Consensus 81 ~v~-~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~----~~~~lP~~l~~ 155 (357)
+++ +|++||||++.+.. .|+.|..|.. . |...+|+|+||++++++ .++++|+++++
T Consensus 80 ~v~~~~~vGdrV~~~~~~-~c~~~~~c~~--------~----------g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~ 140 (410)
T cd08238 80 KWQGKYKPGQRFVIQPAL-ILPDGPSCPG--------Y----------SYTYPGGLATYHIIPNEVMEQDCLLIYEGDGY 140 (410)
T ss_pred CccCCCCCCCEEEEcCCc-CCCCCCCCCC--------c----------cccCCCcceEEEEecHHhccCCeEECCCCCCH
Confidence 998 69999999766443 4888876621 0 22357999999999987 68999999999
Q ss_pred cccccc-c--chhhhhhhhh--------hccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCC---eEEEEeCCcHHHHHH
Q 018382 156 EQAAPL-L--CAGVTVFSPL--------SHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGH---HVTVISSSDKKRVEA 220 (357)
Q Consensus 156 ~~aa~~-~--~~~~ta~~~l--------~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~---~V~~~~~~~~~~~~~ 220 (357)
++++.+ + +. .+++.++ .....+++|++|+|+|+ |++|++++|+|+..|+ +|+++++++++.+.+
T Consensus 141 ~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a 219 (410)
T cd08238 141 AEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA 219 (410)
T ss_pred HHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence 998854 3 22 2233332 23455689999999985 9999999999999754 799999999999888
Q ss_pred HHhc--------CCc-EEEcCCC-hhH---HHHhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccC-CC--Ccc
Q 018382 221 MEHL--------GAD-QYLVSSD-ATR---MQEAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI-NT--PMQ 282 (357)
Q Consensus 221 ~~~~--------g~~-~vv~~~~-~~~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~ 282 (357)
++ + |++ ++++.++ .+. +.+++. ++|++||++|....+..++++++++|+++.++.. .. ...
T Consensus 220 ~~-~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~ 298 (410)
T cd08238 220 QR-LFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAP 298 (410)
T ss_pred HH-hccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCcccc
Confidence 88 5 666 5677643 222 333333 7999999998765788999999999988776543 22 234
Q ss_pred cchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382 283 FLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 353 (357)
Q Consensus 283 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~ 353 (357)
++...++.+++++.|+..+..++++++++++.+|++++ .+ ++|+|+++++||+.+. ++..||+++.++..
T Consensus 299 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~~~ 371 (410)
T cd08238 299 LNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQKP 371 (410)
T ss_pred ccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECCCC
Confidence 66667888999999999888889999999999999987 56 8999999999999999 77789999988543
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=8.4e-43 Score=322.79 Aligned_cols=330 Identities=22% Similarity=0.315 Sum_probs=269.7
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
|++++.. +++.+.+.+++.|+|.++|++||+.++++|++|++.+.|..+...+|.++|||++|+|+++|++++.|++||
T Consensus 1 m~a~~~~-~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIE-KPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEe-cCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 3566655 466888999999999999999999999999999999988766546788999999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF 169 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~ 169 (357)
+|++.+..+ |+.|..|..+.++.|.+..+. +...+|+|+||+.++.+.++++|+++++++++ +...+.++|
T Consensus 80 ~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~ 150 (339)
T PRK10083 80 RVAVDPVIS-CGHCYPCSIGKPNVCTSLVVL-------GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAA 150 (339)
T ss_pred EEEEccccC-CCCCccccCcCcccCCCCceE-------EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHH
Confidence 998776664 999999999999999765432 22247999999999999999999999998876 556778888
Q ss_pred hhhhccCCCCCCCeEEEEecChHHHHHHHHHHH-cCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC---C
Q 018382 170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKA-MGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD---S 244 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~-~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~---~ 244 (357)
.++ ....+++|++|+|+|+|++|++++|+|+. +|++ ++++++++++.+.+++ +|++++++.++.+..+.+.. +
T Consensus 151 ~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~~g~~ 228 (339)
T PRK10083 151 NVT-GRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKE-SGADWVINNAQEPLGEALEEKGIK 228 (339)
T ss_pred HHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHH-hCCcEEecCccccHHHHHhcCCCC
Confidence 654 44556999999999999999999999996 5995 6667777788877777 99999998876544444432 4
Q ss_pred ccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--cE
Q 018382 245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--MI 322 (357)
Q Consensus 245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~i 322 (357)
+|++||++|....+..++++++++|+++.+|.......+....+..+++++.+... ..+.++.++++++++.+.+ .+
T Consensus 229 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~~~~~~ 307 (339)
T PRK10083 229 PTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRL-NANKFPVVIDWLSKGLIDPEKLI 307 (339)
T ss_pred CCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEec-ChhhHHHHHHHHHcCCCChHHhe
Confidence 67999999975578899999999999999987654333344444567778777764 3467899999999999987 35
Q ss_pred -EEeecccHHHHHHHHHcCC-ccEEEEEecCC
Q 018382 323 -EVIKMDYVNKAFERLEKND-VRYRFVVDVAG 352 (357)
Q Consensus 323 -~~~~~~~~~~a~~~~~~~~-~~Gkvvi~~~~ 352 (357)
++|+++++++|++.+++++ ..+|+++++.+
T Consensus 308 ~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 308 THTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred eeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 8999999999999998654 56999998753
No 36
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.1e-42 Score=325.33 Aligned_cols=338 Identities=24% Similarity=0.366 Sum_probs=271.0
Q ss_pred hheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382 8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (357)
.++++.++..+++.++++++|.|+|.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.|++
T Consensus 6 ~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 84 (373)
T cd08299 6 IKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKP 84 (373)
T ss_pred ceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCCC
Confidence 3466777766777899999999999999999999999999999999988763 356889999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCcccccccccccC-ccccC--------CCC-----CCCCccceEEEeeCcceEECCCCC
Q 018382 88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSY-NDVYT--------DGK-----PTQGGFAESMVVDQKFVVKIPDGM 153 (357)
Q Consensus 88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~-----~~~G~~~~~~~v~~~~~~~lP~~l 153 (357)
||+|++.+ ..+||.|.+|..+.++.|+...... .+... .|. ...|+|+||++++.+.++++|+++
T Consensus 85 Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 85 GDKVIPLF-VPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCEEEECC-CCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 99997654 6689999999999999998765321 11111 111 136899999999999999999999
Q ss_pred CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382 154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS 232 (357)
Q Consensus 154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~ 232 (357)
++++++++++++.+||.++.....++++++|||+|+|++|++++++|+..|+ +|+++++++++.+.+++ +|++++++.
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~-lGa~~~i~~ 242 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKE-LGATECINP 242 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceEecc
Confidence 9999999999999999987777777999999999989999999999999999 89999999999998877 999999886
Q ss_pred CChh-----HHHHhh-CCccEEEEcCCCCCChHHHHhcc-ccCCeEEEEccCCCC--cccchHHHhhccceEEEEeecCH
Q 018382 233 SDAT-----RMQEAA-DSLDYIIDTVPANHPLEPYLSLL-KLDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFIGSM 303 (357)
Q Consensus 233 ~~~~-----~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~~ 303 (357)
.+.+ .+.++. +++|++||++|....+..++..+ +++|+++.+|..... ..+... .+.++.++.+++....
T Consensus 243 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~ 321 (373)
T cd08299 243 QDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTGRTWKGAVFGGW 321 (373)
T ss_pred cccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcCCeEEEEEecCC
Confidence 5422 222222 37999999999754667766654 679999999876432 223332 2346678888876533
Q ss_pred ---HHHHHHHHHHHhcCCC--ccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 304 ---KETKEMLEFCREKGVT--SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 304 ---~~~~~~~~~~~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
+.+.++++.+.++.++ +.+ ++|+++++++|++.+++++. .|+++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 322 KSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred ccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 4666777777777544 345 89999999999999987765 5877753
No 37
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=2.3e-42 Score=319.75 Aligned_cols=330 Identities=27% Similarity=0.494 Sum_probs=276.6
Q ss_pred eeeehccCCCCCcc-eeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILS-PYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~-~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (357)
|+++.... ++... ++++|.|+|.++||+||+.++++|++|++.+.|..+. ..|.++|||++|+|+++|++++.|++|
T Consensus 1 mka~~~~~-~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~G 78 (338)
T PRK09422 1 MKAAVVNK-DHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVG 78 (338)
T ss_pred CeEEEecC-CCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCC
Confidence 45566553 33444 8899999999999999999999999999998886543 236789999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382 89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV 168 (357)
Q Consensus 89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta 168 (357)
|+|++.++...||.|..|..+..+.|..... .|....|+|+||+.++.++++++|++++++++++++..+.||
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta 151 (338)
T PRK09422 79 DRVSIAWFFEGCGHCEYCTTGRETLCRSVKN-------AGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTT 151 (338)
T ss_pred CEEEEccCCCCCCCChhhcCCCcccCCCccc-------cCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHH
Confidence 9998888888899999999999999986532 133457999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCeEEEEecChHHHHHHHHHHH-cCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC-hh---HHHHhhC
Q 018382 169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKA-MGHHVTVISSSDKKRVEAMEHLGADQYLVSSD-AT---RMQEAAD 243 (357)
Q Consensus 169 ~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~-~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~---~~~~~~~ 243 (357)
|+++. ...++++++|||+|+|++|++++++|+. .|++|+++++++++.+.+++ +|++.+++.+. .+ .+.+..+
T Consensus 152 ~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~v~~~~~ 229 (338)
T PRK09422 152 YKAIK-VSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKE-VGADLTINSKRVEDVAKIIQEKTG 229 (338)
T ss_pred HHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHH-cCCcEEecccccccHHHHHHHhcC
Confidence 99984 4456999999999999999999999998 49999999999999998866 99999988754 32 2333445
Q ss_pred CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEE
Q 018382 244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIE 323 (357)
Q Consensus 244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~ 323 (357)
++|+++++.++...+..++++++++|+++.+|.......++...+..+..++.++.....+.++.+++++.++.+.+.++
T Consensus 230 ~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~v~ 309 (338)
T PRK09422 230 GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPKVQ 309 (338)
T ss_pred CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCccEE
Confidence 78855555445447899999999999999998765444455555666788888877666788999999999999977677
Q ss_pred EeecccHHHHHHHHHcCCccEEEEEec
Q 018382 324 VIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 324 ~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
.++++++++|++.+.+++..||++++.
T Consensus 310 ~~~~~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 310 LRPLEDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred EEcHHHHHHHHHHHHcCCccceEEEec
Confidence 799999999999999999999999865
No 38
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.5e-42 Score=323.88 Aligned_cols=337 Identities=26% Similarity=0.385 Sum_probs=276.1
Q ss_pred hheeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382 8 RATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (357)
|+|+++++.+.++++++++++.|++.++||+||+.++++|++|+++..|.++ ..+|.++|+|++|+|+++|+++++|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 4678888776556788999999999999999999999999999999988765 346789999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCccccccccccc-CccccCCC---------------CCCCCccceEEEeeCcceEECCC
Q 018382 88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWS-YNDVYTDG---------------KPTQGGFAESMVVDQKFVVKIPD 151 (357)
Q Consensus 88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------------~~~~G~~~~~~~v~~~~~~~lP~ 151 (357)
||+|++.+ ..||.|..|..+..++|...... +.+...+| ....|+|++|+.+++++++++|+
T Consensus 80 Gd~V~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~ 157 (365)
T cd08278 80 GDHVVLSF--ASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK 157 (365)
T ss_pred CCEEEEcc--cCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence 99998765 36999999999999999865422 11111110 11358999999999999999999
Q ss_pred CCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEE
Q 018382 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYL 230 (357)
Q Consensus 152 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv 230 (357)
++++++++.+++++.|||.++.....++++++|||+|+|++|++++|+|+..|+ .|+++++++++.+.+++ +|+++++
T Consensus 158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~-~g~~~~i 236 (365)
T cd08278 158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKE-LGATHVI 236 (365)
T ss_pred CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCcEEe
Confidence 999999999999999999998777777999999999889999999999999999 58888888888777766 9999999
Q ss_pred cCCChhHH---HHh-hCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC--CCcccchHHHhhccceEEEEeecC--
Q 018382 231 VSSDATRM---QEA-ADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN--TPMQFLTPMVMLGRKAITGSFIGS-- 302 (357)
Q Consensus 231 ~~~~~~~~---~~~-~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~g~~~~~-- 302 (357)
+.++.+.. .+. ..++|+++||+|....+..++++++++|+++.+|... ....++...++.++.++.++....
T Consensus 237 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (365)
T cd08278 237 NPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSV 316 (365)
T ss_pred cCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcC
Confidence 87764332 222 2479999999997657899999999999999998753 223455555557888888776432
Q ss_pred -HHHHHHHHHHHHhcCCCc-c-EEEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 303 -MKETKEMLEFCREKGVTS-M-IEVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 303 -~~~~~~~~~~~~~~~l~~-~-i~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
.+.++++++++.++.+.. . ++.|+++++++|++.+++++.. |++|+
T Consensus 317 ~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 317 PQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred hHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 345688899999998864 3 4889999999999999987764 77764
No 39
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=1.8e-42 Score=322.02 Aligned_cols=331 Identities=29% Similarity=0.463 Sum_probs=281.0
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC------------CCCCCCccCccccEEEEE
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG------------MSNYPMVPGHEVVGEVKE 77 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~------------~~~~p~~lG~e~~G~V~~ 77 (357)
|+++.+...+.++++.++|.|+++++||+||+.++++|++|++.+.|.++ ...+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 45676655556688999999999999999999999999999999887653 223467899999999999
Q ss_pred eCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccc
Q 018382 78 VGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQ 157 (357)
Q Consensus 78 vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~ 157 (357)
+|++++++++||+|++.++. .|+.|..|.++..+.|..+... |....|++++|+.++.+.++++|+++++++
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~ 152 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWI-GCGECPVCLAGDENLCAKGRAL-------GIFQDGGYAEYVIVPHSRYLVDPGGLDPAL 152 (350)
T ss_pred eCCCCCCCCCCCEEEECCcC-CCCCChHHHCcCcccCCCCCce-------eeeccCcceeeEEecHHHeeeCCCCCCHHH
Confidence 99999999999999877666 6899999999999999765332 123579999999999999999999999999
Q ss_pred cccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChh
Q 018382 158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDAT 236 (357)
Q Consensus 158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~ 236 (357)
++++++.+.|||.++.....++++++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+.+ +|++.+++.++.+
T Consensus 153 aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 231 (350)
T cd08240 153 AATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA-AGADVVVNGSDPD 231 (350)
T ss_pred eehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCCcEEecCCCcc
Confidence 999999999999999888876789999999889999999999999999 78898888888888866 9998888876643
Q ss_pred H---HHHhhC-CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHH
Q 018382 237 R---MQEAAD-SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEF 312 (357)
Q Consensus 237 ~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 312 (357)
. +.+... ++|++||++|....+..++++|+++|+++.++...............++.++.+......+++..++++
T Consensus 232 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l 311 (350)
T cd08240 232 AAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVAL 311 (350)
T ss_pred HHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHH
Confidence 3 222223 799999999865478999999999999999987654433444445568889999888777889999999
Q ss_pred HHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 313 CREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 313 ~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
++++.+++.. +.|+++++++|++.+++++..||++++
T Consensus 312 l~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 312 AKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred HHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 9999988755 899999999999999999989999875
No 40
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.8e-42 Score=326.69 Aligned_cols=335 Identities=18% Similarity=0.231 Sum_probs=277.7
Q ss_pred hhhheeeehcc----CCC-CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC----------CCCCCCccCcc
Q 018382 6 TERATIGWAAK----DPS-GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG----------MSNYPMVPGHE 70 (357)
Q Consensus 6 ~~~~~~~~~~~----~~~-~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~----------~~~~p~~lG~e 70 (357)
+|.+|++++.. +++ ..+++++++.|.++++||+||+.++++|++|++...|... ....+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 57778887763 222 2477889999999999999999999999999988766411 11123588999
Q ss_pred ccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECC
Q 018382 71 VVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIP 150 (357)
Q Consensus 71 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP 150 (357)
++|+|+++|++++.|++||+|++.+.. .|+.|..|..+.+++|+...+.+. ....|+|++|++++...++++|
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~g~------~~~~g~~a~y~~v~~~~l~~iP 161 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSV-WDGNDPERAGGDPMFDPSQRIWGY------ETNYGSFAQFALVQATQLMPKP 161 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccc-cccCcccccccccccccccccccc------cCCCCcceeEEEechHHeEECC
Confidence 999999999999999999999765544 488999999999999986543321 1257999999999999999999
Q ss_pred CCCCccccccccchhhhhhhhhhcc--CCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc
Q 018382 151 DGMALEQAAPLLCAGVTVFSPLSHF--GLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD 227 (357)
Q Consensus 151 ~~l~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~ 227 (357)
+++++++++.+++.+.|||+++... ..++++++|+|+|+ |++|++++++|+..|++++++++++++.+.+++ +|++
T Consensus 162 ~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~-~G~~ 240 (393)
T cd08246 162 KHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRA-LGAE 240 (393)
T ss_pred CCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cCCC
Confidence 9999999999999999999998654 55689999999997 999999999999999999999999999988877 9999
Q ss_pred EEEcCCCh-------------------------hHHHHhhC---CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC
Q 018382 228 QYLVSSDA-------------------------TRMQEAAD---SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT 279 (357)
Q Consensus 228 ~vv~~~~~-------------------------~~~~~~~~---~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 279 (357)
++++.++. ..+.++.+ ++|++||++|.. .+..++++++++|+++.+|....
T Consensus 241 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~ 319 (393)
T cd08246 241 GVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRGGMVVICAGTTG 319 (393)
T ss_pred EEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccCCEEEEEcccCC
Confidence 98886432 11222332 699999999986 78899999999999999986543
Q ss_pred C-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcC-CccEEEEEe
Q 018382 280 P-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKN-DVRYRFVVD 349 (357)
Q Consensus 280 ~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~-~~~Gkvvi~ 349 (357)
. ..++...++.++.++.+++.+..+.+..++++++++.+.+.+ ++|+++++++|++.+.++ +..||+++-
T Consensus 320 ~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 320 YNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred CCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 2 334555667788889998888888899999999999998766 899999999999999998 788998874
No 41
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.6e-42 Score=320.99 Aligned_cols=333 Identities=21% Similarity=0.232 Sum_probs=269.2
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
|+++.+.+ ++.+.+++++.|.+.++||+||+.++++|++|++...+..+....|.++|||++|+|+++|+++++|++||
T Consensus 1 mka~~~~~-~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLG-IGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEcc-CCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 45666653 45688889999999999999999999999999998887665446688999999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc--ceEECCCCCCccccccccchhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMALEQAAPLLCAGVT 167 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~~aa~~~~~~~t 167 (357)
+|++.+.. .|+.|..|..|.++.|.+.. .+.. .+....|+|+||+.++.+ .++++|+++++++++.++..+.|
T Consensus 80 ~V~~~~~~-~~~~c~~c~~g~~~~~~~~~---~~~~-~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~t 154 (351)
T cd08285 80 RVIVPAIT-PDWRSVAAQRGYPSQSGGML---GGWK-FSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMST 154 (351)
T ss_pred EEEEcCcC-CCCCCHHHHCcCcccCcCCC---CCcc-ccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhh
Confidence 99876554 69999999999999998742 0100 122357999999999974 89999999999999999999999
Q ss_pred hhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh-
Q 018382 168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA- 242 (357)
Q Consensus 168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~- 242 (357)
||+++.. ..++++++|||+|+|++|++++|+|+..|+ .|+++++++++.+.+++ +|+++++++++.+..+ ...
T Consensus 155 a~~~~~~-~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~i~~~~~ 232 (351)
T cd08285 155 GFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKE-YGATDIVDYKNGDVVEQILKLTG 232 (351)
T ss_pred HHHHHHc-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCceEecCCCCCHHHHHHHHhC
Confidence 9999754 455999999999889999999999999999 58888888888777777 9999999877644333 333
Q ss_pred -CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc--ccch--HHHhhccceEEEEeec-CHHHHHHHHHHHHhc
Q 018382 243 -DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM--QFLT--PMVMLGRKAITGSFIG-SMKETKEMLEFCREK 316 (357)
Q Consensus 243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~--~~~~~~~~~i~g~~~~-~~~~~~~~~~~~~~~ 316 (357)
.++|++||++|+...+..++++++++|+++.+|...... .++. .....+..++.+.... +.+.++++++++.++
T Consensus 233 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g 312 (351)
T cd08285 233 GKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYG 312 (351)
T ss_pred CCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcC
Confidence 379999999998657889999999999999998765432 2221 1123455566665542 456789999999999
Q ss_pred CCCc---cE-EEeecccHHHHHHHHHcCCc-cEEEEEec
Q 018382 317 GVTS---MI-EVIKMDYVNKAFERLEKNDV-RYRFVVDV 350 (357)
Q Consensus 317 ~l~~---~i-~~~~~~~~~~a~~~~~~~~~-~Gkvvi~~ 350 (357)
++++ .+ ++|+++++++|++.+++++. .+|++|++
T Consensus 313 ~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 313 RVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred CCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 9987 23 56999999999999998874 68999864
No 42
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=8.2e-42 Score=321.12 Aligned_cols=336 Identities=21% Similarity=0.241 Sum_probs=275.2
Q ss_pred eeeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (357)
|+++.+. +++.+++.+++.|.| .++||+||+.++++|++|+.++.|.++..++|.++|||++|+|+++|+++++|++|
T Consensus 1 m~a~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWH-GKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEe-cCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 4566666 467899999999998 49999999999999999999999987655678899999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCcccccccccccC--------ccccCCCC-----CCCCccceEEEeeCc--ceEECCCCC
Q 018382 89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSY--------NDVYTDGK-----PTQGGFAESMVVDQK--FVVKIPDGM 153 (357)
Q Consensus 89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-----~~~G~~~~~~~v~~~--~~~~lP~~l 153 (357)
|+|++.+.. .||+|..|..+.++.|++..... ......+. ...|+|++|++++.+ .++++|+++
T Consensus 80 d~V~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~ 158 (386)
T cd08283 80 DRVVVPFTI-ACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDL 158 (386)
T ss_pred CEEEEcCcC-CCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCC
Confidence 999776555 49999999999999998754321 11111111 246999999999987 899999999
Q ss_pred CccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcC
Q 018382 154 ALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVS 232 (357)
Q Consensus 154 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~ 232 (357)
+++++++++..+++||+++ ....++++++|||+|+|.+|++++++|+..|+ +|+++++++++.+.+++ ++...++++
T Consensus 159 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~-~~~~~vi~~ 236 (386)
T cd08283 159 SDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARS-HLGAETINF 236 (386)
T ss_pred CHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCcEEEcC
Confidence 9999999999999999999 55667999999999889999999999999998 59999999999888888 633356766
Q ss_pred CChh-HHHH---hhC--CccEEEEcCCCC---------------------CChHHHHhccccCCeEEEEccCCCC-cccc
Q 018382 233 SDAT-RMQE---AAD--SLDYIIDTVPAN---------------------HPLEPYLSLLKLDGKLILTGVINTP-MQFL 284 (357)
Q Consensus 233 ~~~~-~~~~---~~~--~~d~v~d~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~ 284 (357)
...+ +... ... ++|++||++|+. ..++.++++++++|+++.++..... ..++
T Consensus 237 ~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~ 316 (386)
T cd08283 237 EEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKFP 316 (386)
T ss_pred CcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCccC
Confidence 5542 3333 222 799999999753 2467889999999999999876442 3344
Q ss_pred hHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCC-ccEEEEEe
Q 018382 285 TPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKND-VRYRFVVD 349 (357)
Q Consensus 285 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~-~~Gkvvi~ 349 (357)
....+.++.++.+......+.++.++++++++.+.+ .+ +.|+++++++|++.+++++ ..+|++|+
T Consensus 317 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 317 IGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred HHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence 445678888988887666678999999999999986 35 8999999999999998877 45899985
No 43
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.7e-42 Score=317.11 Aligned_cols=328 Identities=27% Similarity=0.402 Sum_probs=277.9
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
|++++....+.++++++++.|.+.++|++||+.++++|++|++...|..+...+|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 45666654445699999999999999999999999999999998888776556678899999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF 169 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~ 169 (357)
+|++.++ ..|+.|..|..+.++.|+...+. |.+.+|++++|+.++.+.++++|+++++++++.+++.+.+||
T Consensus 81 ~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~ 152 (334)
T PRK13771 81 RVASLLY-APDGTCEYCRSGEEAYCKNRLGY-------GEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVY 152 (334)
T ss_pred EEEECCC-CCCcCChhhcCCCcccCcccccc-------ccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHH
Confidence 9977655 47999999999999999876432 234579999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-hHHHHhhCCccE
Q 018382 170 SPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-TRMQEAADSLDY 247 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~~~~d~ 247 (357)
+++... .++++++|+|+|+ |.+|++++++++..|++|+++++++++.+.+++ + ++++++.++. +.+... .++|+
T Consensus 153 ~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~v~~~-~~~d~ 228 (334)
T PRK13771 153 RGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSK-Y-ADYVIVGSKFSEEVKKI-GGADI 228 (334)
T ss_pred HHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-H-HHHhcCchhHHHHHHhc-CCCcE
Confidence 999887 6699999999987 999999999999999999999999998888866 7 7777665421 112222 37999
Q ss_pred EEEcCCCCCChHHHHhccccCCeEEEEccCCCCcc--cchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-EE
Q 018382 248 IIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ--FLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EV 324 (357)
Q Consensus 248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~~ 324 (357)
+||++|+. ....++++++++|+++.+|....... ......+.++.++.+......+.++.++++++++.+++.+ ++
T Consensus 229 ~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 307 (334)
T PRK13771 229 VIETVGTP-TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPVIGAE 307 (334)
T ss_pred EEEcCChH-HHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcceEeee
Confidence 99999987 78899999999999999987543222 3333345678888887766778899999999999998766 89
Q ss_pred eecccHHHHHHHHHcCCccEEEEEec
Q 018382 325 IKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 325 ~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
|+++++++|++.+++++..||+++++
T Consensus 308 ~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 308 VSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred EcHHHHHHHHHHHHcCCCcceEEEec
Confidence 99999999999999988889999865
No 44
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.7e-41 Score=314.89 Aligned_cols=331 Identities=25% Similarity=0.350 Sum_probs=282.4
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
|++|+....+.++++.+++.|.+.++||+||+.++++|++|+....|..+...+|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 46777755455688899999999999999999999999999999988766556688999999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc--ceEECCCCCCccccccccchhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMALEQAAPLLCAGVT 167 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~~aa~~~~~~~t 167 (357)
+|++ ++...||+|..|..|..+.|.++... +....|++++|+++++. .++++|+++++++++.++..+.+
T Consensus 81 ~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~t 152 (345)
T cd08260 81 RVTV-PFVLGCGTCPYCRAGDSNVCEHQVQP-------GFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFAT 152 (345)
T ss_pred EEEE-CCCCCCCCCccccCcCcccCCCCccc-------ccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHH
Confidence 9976 45567999999999999999986432 22247999999999975 99999999999999999999999
Q ss_pred hhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC-hhHHHH---hh-
Q 018382 168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD-ATRMQE---AA- 242 (357)
Q Consensus 168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~---~~- 242 (357)
||+++.....+.++++|+|+|+|++|++++|+|+..|++|+++++++++.+.+++ +|++++++.+. .+.... ..
T Consensus 153 a~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~ 231 (345)
T cd08260 153 AFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELARE-LGAVATVNASEVEDVAAAVRDLTG 231 (345)
T ss_pred HHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-hCCCEEEccccchhHHHHHHHHhC
Confidence 9999877777789999999999999999999999999999999999999888877 99999998876 443322 22
Q ss_pred CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC---cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC
Q 018382 243 DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP---MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT 319 (357)
Q Consensus 243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~ 319 (357)
+++|++||++|+.......+++++++|+++.+|..... ..++...++.++.++.+......+.++.++++++++.+.
T Consensus 232 ~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~ 311 (345)
T cd08260 232 GGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLD 311 (345)
T ss_pred CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCC
Confidence 27999999998644788899999999999999875432 234455566788899988777778899999999999887
Q ss_pred cc--E-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 320 SM--I-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 320 ~~--i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
+. + +.++++++++|++.+++++..||+|++
T Consensus 312 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 312 PEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred hhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 52 5 899999999999999999999998864
No 45
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.9e-41 Score=312.81 Aligned_cols=331 Identities=33% Similarity=0.528 Sum_probs=282.3
Q ss_pred eeehccCC-CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382 11 IGWAAKDP-SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVG 88 (357)
Q Consensus 11 ~~~~~~~~-~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (357)
+++++... +..+.+.+++.|.|.++|++||+.+.++|++|+.++.|.++ ....+.++|+|++|+|+++|++++.|++|
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~G 81 (341)
T cd08297 2 KAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVG 81 (341)
T ss_pred ceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCCC
Confidence 45554422 35788999999999999999999999999999999888664 23446678999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382 89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV 168 (357)
Q Consensus 89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta 168 (357)
|+|+..+...+||.|..|..++.+.|+.+... |....|++++|+.++.+.++++|++++++++++++..+.||
T Consensus 82 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta 154 (341)
T cd08297 82 DRVGVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTV 154 (341)
T ss_pred CEEEEecCCCCCCCCccccCCCcccCCCcccc-------ccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHH
Confidence 99988877788999999999999999875433 23457899999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh--
Q 018382 169 FSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA-- 242 (357)
Q Consensus 169 ~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~-- 242 (357)
|.++... .++++++|||+|+ +.+|++++++|+..|++|+++++++++.+.+.+ +|++++++.++.+...+ ..
T Consensus 155 ~~~~~~~-~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~ 232 (341)
T cd08297 155 YKALKKA-GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKE-LGADAFVDFKKSDDVEAVKELTGG 232 (341)
T ss_pred HHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-cCCcEEEcCCCccHHHHHHHHhcC
Confidence 9998776 5699999999987 679999999999999999999999999888866 99999998876544333 32
Q ss_pred CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCcc
Q 018382 243 DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSM 321 (357)
Q Consensus 243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~ 321 (357)
+++|++||+.+....+..++++++++|+++.+|..... ..++...++.++.++.+......+.++.+++++.++.+.+.
T Consensus 233 ~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 312 (341)
T cd08297 233 GGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKPH 312 (341)
T ss_pred CCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCcce
Confidence 37999999777655788999999999999999865533 24555566688899988777667889999999999999876
Q ss_pred EEEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 322 IEVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 322 i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
++.|+++++++|++.+.+++..||+++++
T Consensus 313 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 313 IQVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred eEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 68899999999999999999999999875
No 46
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=6.7e-42 Score=314.78 Aligned_cols=291 Identities=21% Similarity=0.251 Sum_probs=243.9
Q ss_pred CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCC-CCCCCEEEEcccc
Q 018382 20 GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSN-FKVGDKVGVGVLV 97 (357)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~ 97 (357)
..+++.++|.|.|+++||+||+.++++|++|++.+.|.++ ...+|.++|||++|+|+++|+++++ |++||+|++..
T Consensus 16 ~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~-- 93 (324)
T cd08291 16 KELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLA-- 93 (324)
T ss_pred cEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCccccCCCCCEEEecC--
Confidence 3577889999999999999999999999999999988764 2356889999999999999999996 99999997531
Q ss_pred CCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCC
Q 018382 98 GCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL 177 (357)
Q Consensus 98 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~ 177 (357)
..+|+|+||++++++.++++|+++++++++++++.+.|||.++.. ..
T Consensus 94 --------------------------------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~-~~ 140 (324)
T cd08291 94 --------------------------------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLET-AR 140 (324)
T ss_pred --------------------------------CCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHh-hc
Confidence 015999999999999999999999999999999999999865543 33
Q ss_pred CCCCCeEEEE-e-cChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh--CCccEEEE
Q 018382 178 KQSGLRGGIL-G-LGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA--DSLDYIID 250 (357)
Q Consensus 178 ~~~~~~VlI~-G-~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~--~~~d~v~d 250 (357)
.++++++|+ | +|++|++++|+|+..|++|+++++++++.+.+++ +|++++++++..+..++ .. .++|++||
T Consensus 141 -~~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid 218 (324)
T cd08291 141 -EEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-IGAEYVLNSSDPDFLEDLKELIAKLNATIFFD 218 (324)
T ss_pred -cCCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEECCCccHHHHHHHHhCCCCCcEEEE
Confidence 256667775 4 5999999999999999999999999999888887 99999998876544333 33 27999999
Q ss_pred cCCCCCChHHHHhccccCCeEEEEccCCCC-c-ccchHHHhhccceEEEEeecC------HHHHHHHHHHHHhcCCCccE
Q 018382 251 TVPANHPLEPYLSLLKLDGKLILTGVINTP-M-QFLTPMVMLGRKAITGSFIGS------MKETKEMLEFCREKGVTSMI 322 (357)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~~~~~~l~~~i 322 (357)
++|+. .....+++++++|+++.+|..... . .++...++.++.++.+++... .+.++.++++++ +.+++.+
T Consensus 219 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i 296 (324)
T cd08291 219 AVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTF 296 (324)
T ss_pred CCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cccccce
Confidence 99987 677889999999999999865432 2 244556677899998887643 346778888887 8999888
Q ss_pred -EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 323 -EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 323 -~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
++|+++|+.+||+.+.+++..||+++.
T Consensus 297 ~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 297 ASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred eeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 899999999999999999999999873
No 47
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=3.3e-41 Score=314.80 Aligned_cols=335 Identities=24% Similarity=0.397 Sum_probs=275.4
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
|++|++...+.++++.++++|++.++||+|++.++++|+.|+.++.|.++ ..+|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 46777765556788999999999999999999999999999999988765 35677899999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCC--------C-----CCCCCccceEEEeeCcceEECCCCCCcc
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTD--------G-----KPTQGGFAESMVVDQKFVVKIPDGMALE 156 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-----~~~~G~~~~~~~v~~~~~~~lP~~l~~~ 156 (357)
+|+.. ....||+|..|.+++.+.|.+..+...+-.++ | ....|+|++|+.++++.++++|++++++
T Consensus 80 ~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~ 158 (363)
T cd08279 80 HVVLS-WIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLD 158 (363)
T ss_pred EEEEC-CCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChH
Confidence 99665 44579999999999999998653221111111 1 1246999999999999999999999999
Q ss_pred ccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCCh
Q 018382 157 QAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDA 235 (357)
Q Consensus 157 ~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~ 235 (357)
+++.+++.+.+||.++.....++++++|||+|+|++|++++++|+..|++ |+++++++++.+.+.+ +|++++++.+..
T Consensus 159 ~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~-~g~~~vv~~~~~ 237 (363)
T cd08279 159 RAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARR-FGATHTVNASED 237 (363)
T ss_pred HeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH-hCCeEEeCCCCc
Confidence 99999999999999988777789999999998899999999999999996 9999998888887766 999999987764
Q ss_pred hHHH---Hhh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--CcccchHHHhhccceEEEEeec---CHHH
Q 018382 236 TRMQ---EAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFLTPMVMLGRKAITGSFIG---SMKE 305 (357)
Q Consensus 236 ~~~~---~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~---~~~~ 305 (357)
.... ... .++|++||+++....+..++++++++|+++.++.... ...++...+..++.++.+++.. ..+.
T Consensus 238 ~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (363)
T cd08279 238 DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRD 317 (363)
T ss_pred cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHH
Confidence 3333 332 3799999999965578899999999999999976542 3345555555567777776542 3467
Q ss_pred HHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEE
Q 018382 306 TKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFV 347 (357)
Q Consensus 306 ~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvv 347 (357)
++++++++.++.+++ .+ ++|+++++++|++.+++++..+.++
T Consensus 318 ~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 318 IPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 889999999999886 35 8999999999999999888765554
No 48
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=2.2e-41 Score=319.53 Aligned_cols=339 Identities=18% Similarity=0.246 Sum_probs=279.8
Q ss_pred hhhheeeehccC----CC-CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC----------CCCCC-CccCc
Q 018382 6 TERATIGWAAKD----PS-GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG----------MSNYP-MVPGH 69 (357)
Q Consensus 6 ~~~~~~~~~~~~----~~-~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~----------~~~~p-~~lG~ 69 (357)
+|.+|++|++.. ++ +.+.+.+++.|.|+++|++||+.++++|++|++...+... ....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 466778888732 22 4688889999999999999999999999999887655321 01123 37999
Q ss_pred cccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEEC
Q 018382 70 EVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI 149 (357)
Q Consensus 70 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~l 149 (357)
|++|+|+++|++++.|++||+|++. ....|++|..|..+.++.|....+. +. ....|+|+||+.++.+.++++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--g~----~~~~g~~ae~~~v~~~~~~~v 156 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVAS-CLQVDLTAPDGRVGDPMLSSEQRIW--GY----ETNFGSFAEFALVKDYQLMPK 156 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEc-cccccCCchhhccCccccccccccc--cc----cCCCccceEEEEechHHeEEC
Confidence 9999999999999999999999665 4456899999999999999764321 10 125789999999999999999
Q ss_pred CCCCCccccccccchhhhhhhhhhc--cCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC
Q 018382 150 PDGMALEQAAPLLCAGVTVFSPLSH--FGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA 226 (357)
Q Consensus 150 P~~l~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~ 226 (357)
|+++++++++.+.+.+.+||.++.. ...++++++|+|+|+ |++|++++++|+..|++++++++++++.+.+++ +|+
T Consensus 157 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~-~g~ 235 (398)
T TIGR01751 157 PKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRE-LGA 235 (398)
T ss_pred CCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-cCC
Confidence 9999999999999999999999865 455689999999997 999999999999999999998888888888887 999
Q ss_pred cEEEcCCChh----------------------H---HHHhh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC
Q 018382 227 DQYLVSSDAT----------------------R---MQEAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT 279 (357)
Q Consensus 227 ~~vv~~~~~~----------------------~---~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 279 (357)
+.++|.++.+ . +.+.. +++|++|||+|.. .+..++++++++|+++.+|....
T Consensus 236 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~ 314 (398)
T TIGR01751 236 EAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRRGGMVVICGGTTG 314 (398)
T ss_pred CEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhccCCEEEEEccccC
Confidence 9999865321 1 11222 3699999999976 78899999999999999987654
Q ss_pred C-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382 280 P-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 353 (357)
Q Consensus 280 ~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~ 353 (357)
. ..++...++.++.++.++.....++++++++++.++.+.+.+ +++++++++++++.+.+++..||+++++...
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~ 390 (398)
T TIGR01751 315 YNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLAP 390 (398)
T ss_pred CCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCCC
Confidence 3 344555566778888888877778889999999999998777 8999999999999999999999999998654
No 49
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.9e-41 Score=314.01 Aligned_cols=293 Identities=19% Similarity=0.204 Sum_probs=240.8
Q ss_pred Ccceee---eecC-CCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCc--cccEEEEEeCCCCCCCCCCCEEEEc
Q 018382 21 ILSPYT---YTLR-NTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGH--EVVGEVKEVGSEVSNFKVGDKVGVG 94 (357)
Q Consensus 21 ~~~~~~---~~~p-~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~--e~~G~V~~vG~~v~~~~~Gd~V~~~ 94 (357)
.|++++ .+.| ++++||||||+.++++||.|+....+..+...+|.++|+ |++|+|..+|+++++|++||+|+.
T Consensus 26 ~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~- 104 (348)
T PLN03154 26 DMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISG- 104 (348)
T ss_pred cEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEe-
Confidence 466665 3555 458999999999999999998654432232345788998 889999999999999999999952
Q ss_pred cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcc--eEE--CCCCCCcc-ccccccchhhhhh
Q 018382 95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKF--VVK--IPDGMALE-QAAPLLCAGVTVF 169 (357)
Q Consensus 95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~--~~~--lP~~l~~~-~aa~~~~~~~ta~ 169 (357)
.|+|+||.+++... +++ +|++++++ ++|+++++++|||
T Consensus 105 -------------------------------------~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~ 147 (348)
T PLN03154 105 -------------------------------------ITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAY 147 (348)
T ss_pred -------------------------------------cCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHH
Confidence 36799999998753 544 59999986 6889999999999
Q ss_pred hhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-hH---HHHhh-C
Q 018382 170 SPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-TR---MQEAA-D 243 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~---~~~~~-~ 243 (357)
.++.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++.+|+++++++++. +. +.+.. +
T Consensus 148 ~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~ 227 (348)
T PLN03154 148 AGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPE 227 (348)
T ss_pred HHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCC
Confidence 99987777799999999987 9999999999999999999999998888888744999999988642 33 22332 3
Q ss_pred CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc------ccchHHHhhccceEEEEeecC-----HHHHHHHHHH
Q 018382 244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM------QFLTPMVMLGRKAITGSFIGS-----MKETKEMLEF 312 (357)
Q Consensus 244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~ 312 (357)
++|++||++|+. .+..++++++++|+++.+|...... .++...++.+++++.|++... .+.+++++++
T Consensus 228 gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l 306 (348)
T PLN03154 228 GIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRY 306 (348)
T ss_pred CcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHH
Confidence 799999999986 8899999999999999998754321 124455778899999987643 2457889999
Q ss_pred HHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCC
Q 018382 313 CREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAG 352 (357)
Q Consensus 313 ~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~ 352 (357)
+++|++++.+ ++|+|+++++|++.+++++..||+|+++..
T Consensus 307 ~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 307 YKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAK 347 (348)
T ss_pred HHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence 9999999888 799999999999999999999999999854
No 50
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=4.8e-41 Score=313.80 Aligned_cols=333 Identities=25% Similarity=0.381 Sum_probs=271.7
Q ss_pred eeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCE
Q 018382 11 IGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDK 90 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (357)
++++...+++++.+++++.|.+.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++||+
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (365)
T cd05279 2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGDK 80 (365)
T ss_pred ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCCE
Confidence 3555555666899999999999999999999999999999999988764 345789999999999999999999999999
Q ss_pred EEEccccCCCCCCcccccCcccccccccccCc-cccCCC-------------CCCCCccceEEEeeCcceEECCCCCCcc
Q 018382 91 VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYN-DVYTDG-------------KPTQGGFAESMVVDQKFVVKIPDGMALE 156 (357)
Q Consensus 91 V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~G~~~~~~~v~~~~~~~lP~~l~~~ 156 (357)
|++.+. .+|++|.+|..+.+++|....+.+. +...+| ....|+|++|+.++++.++++|++++++
T Consensus 81 Vv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~ 159 (365)
T cd05279 81 VIPLFG-PQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLE 159 (365)
T ss_pred EEEcCC-CCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHH
Confidence 977654 5799999999999999987664421 111111 1135799999999999999999999999
Q ss_pred ccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCCh
Q 018382 157 QAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDA 235 (357)
Q Consensus 157 ~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~ 235 (357)
+++.+.+++.+||.++.....++++++|||+|+|++|++++++|+..|++ |+++++++++.+.+.+ +|++++++.++.
T Consensus 160 ~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~ 238 (365)
T cd05279 160 KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQ-LGATECINPRDQ 238 (365)
T ss_pred HhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCCCeecccccc
Confidence 99999999999999987777779999999998899999999999999995 6777778888888866 999999887654
Q ss_pred --hHHH---Hh-hCCccEEEEcCCCCCChHHHHhccc-cCCeEEEEccCC--CCcccchHHHhhccceEEEEeec---CH
Q 018382 236 --TRMQ---EA-ADSLDYIIDTVPANHPLEPYLSLLK-LDGKLILTGVIN--TPMQFLTPMVMLGRKAITGSFIG---SM 303 (357)
Q Consensus 236 --~~~~---~~-~~~~d~v~d~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~g~~~~---~~ 303 (357)
+..+ +. .+++|++||++|....+..++++++ ++|+++.+|... ....++...+ .+..++.|++.. ..
T Consensus 239 ~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~ 317 (365)
T cd05279 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSK 317 (365)
T ss_pred cchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCchH
Confidence 3322 22 2479999999987547888999999 999999998754 2344555555 567778877543 34
Q ss_pred HHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382 304 KETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 304 ~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi 348 (357)
+.+..+++++.++.+.. .+ ++|+++++++||+.+++++.. |+++
T Consensus 318 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 318 DSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred hHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 67888999999998875 34 899999999999999887654 6665
No 51
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=4.5e-41 Score=312.18 Aligned_cols=331 Identities=24% Similarity=0.363 Sum_probs=272.4
Q ss_pred eeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 11 IGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
+++.+. +++.+.+.+++.|.| .++||+||+.++++|++|++++.|.++...+|.++|+|++|+|+++|+++++|++||
T Consensus 2 ka~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 80 (347)
T cd05278 2 KALVYL-GPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGD 80 (347)
T ss_pred ceEEEe-cCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCCC
Confidence 466655 355688889999999 999999999999999999999998876566788999999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc--ceEECCCCCCccccccccchhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMALEQAAPLLCAGVT 167 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~~aa~~~~~~~t 167 (357)
+|++. ....||.|.+|..|..+.|++..+... .+....|+|++|++++++ +++++|+++++++++.++..+.|
T Consensus 81 ~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~t 155 (347)
T cd05278 81 RVSVP-CITFCGRCRFCRRGYHAHCENGLWGWK----LGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPT 155 (347)
T ss_pred EEEec-CCCCCCCChhHhCcCcccCcCCCcccc----cccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhh
Confidence 99765 445799999999999999987553321 223357999999999987 99999999999999999999999
Q ss_pred hhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh-
Q 018382 168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA- 242 (357)
Q Consensus 168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~- 242 (357)
||+++ ....++++++|||.|+|.+|++++|+|+..|. +|+++.+++++.+.+++ +|++++++.+..+.... ..
T Consensus 156 a~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~i~~~~~ 233 (347)
T cd05278 156 GFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKE-AGATDIINPKNGDIVEQILELTG 233 (347)
T ss_pred eeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-hCCcEEEcCCcchHHHHHHHHcC
Confidence 99998 55667999999998889999999999999997 88888887777776666 99999998876544332 22
Q ss_pred -CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCccc-chHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382 243 -DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQF-LTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320 (357)
Q Consensus 243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~ 320 (357)
+++|++||+++....+..++++++++|+++.+|........ .....+.++.++.++.....+.++++++++.++.+.+
T Consensus 234 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (347)
T cd05278 234 GRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDP 313 (347)
T ss_pred CCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCCh
Confidence 37999999998744788899999999999999865433211 1122345677777766555678899999999999886
Q ss_pred c--E-EEeecccHHHHHHHHHcCCc-cEEEEEe
Q 018382 321 M--I-EVIKMDYVNKAFERLEKNDV-RYRFVVD 349 (357)
Q Consensus 321 ~--i-~~~~~~~~~~a~~~~~~~~~-~Gkvvi~ 349 (357)
. + +.|+++++++|++.+.+++. .+|++++
T Consensus 314 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 314 SKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred hHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 2 4 88999999999999988877 7899876
No 52
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=7.9e-41 Score=308.44 Aligned_cols=327 Identities=29% Similarity=0.442 Sum_probs=275.9
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
|++++...+++.+.+.++|.|.+.++||+|+++++++|++|++.+.|..+....|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 35677654466888889999999999999999999999999999988776556678999999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF 169 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~ 169 (357)
+|++.... .|+.|..|..+.++.|++.. .. |....|++++|++++...++++|+++++++++.+++.+.+||
T Consensus 81 ~V~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~ 152 (332)
T cd08259 81 RVILYYYI-PCGKCEYCLSGEENLCRNRA--EY-----GEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAV 152 (332)
T ss_pred EEEECCCC-CCcCChhhhCCCcccCCCcc--cc-----ccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHH
Confidence 99776554 49999999999999998752 11 234679999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh--CCcc
Q 018382 170 SPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA--DSLD 246 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~--~~~d 246 (357)
+++.. ..+.+++++||+|+ |.+|++++++++..|++|+++++++++.+.+.+ +|.+++++..+ ..+.+. .++|
T Consensus 153 ~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~d 228 (332)
T cd08259 153 HALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKE-LGADYVIDGSK--FSEDVKKLGGAD 228 (332)
T ss_pred HHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cCCcEEEecHH--HHHHHHhccCCC
Confidence 99987 66689999999987 999999999999999999999998888887766 89888776544 222222 2799
Q ss_pred EEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcc-cchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-EE
Q 018382 247 YIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ-FLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EV 324 (357)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~~ 324 (357)
++|+++|.. ....++++++++|+++.++....... +.......++.++.++.....+.++.+++++.++.+++.+ ++
T Consensus 229 ~v~~~~g~~-~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 307 (332)
T cd08259 229 VVIELVGSP-TIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVIDRV 307 (332)
T ss_pred EEEECCChH-HHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccceeEE
Confidence 999999987 68889999999999999987543322 2333334567777777666678899999999999998767 89
Q ss_pred eecccHHHHHHHHHcCCccEEEEEe
Q 018382 325 IKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 325 ~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
|+++++++||+.+.+++..||++++
T Consensus 308 ~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 308 VSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred EcHHHHHHHHHHHHcCCcccEEEeC
Confidence 9999999999999999988999874
No 53
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.1e-40 Score=307.43 Aligned_cols=324 Identities=31% Similarity=0.545 Sum_probs=272.8
Q ss_pred eeeehccCCC----CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCC
Q 018382 10 TIGWAAKDPS----GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNF 85 (357)
Q Consensus 10 ~~~~~~~~~~----~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~ 85 (357)
|++|++.+.. .++.+++.+.|.+.++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 3455554333 267788888888999999999999999999999998877655668899999999999999999999
Q ss_pred CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchh
Q 018382 86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAG 165 (357)
Q Consensus 86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~ 165 (357)
++||+|++.+...+|+.|..|..+.++.|+...+. +...+|+|++|+.++.+.++++|+++++.+++.+++.+
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~ 153 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAG 153 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc-------ccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhh
Confidence 99999987666667999999999999999876544 22357999999999999999999999999999999999
Q ss_pred hhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCc
Q 018382 166 VTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL 245 (357)
Q Consensus 166 ~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~ 245 (357)
.|||+++ ....++++++|||+|+|++|++++++++..|++|+++++++++.+.+++ +|++++++.+.. ..+++
T Consensus 154 ~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~-----~~~~v 226 (329)
T cd08298 154 IIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELARE-LGADWAGDSDDL-----PPEPL 226 (329)
T ss_pred HHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHH-hCCcEEeccCcc-----CCCcc
Confidence 9999999 6667799999999999999999999999999999999999998888866 999888776542 12479
Q ss_pred cEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc-ccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEE
Q 018382 246 DYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM-QFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEV 324 (357)
Q Consensus 246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~ 324 (357)
|+++++.+....+..++++++++|+++.++...... .++.. .+.++..+.++.....+.++.++++++++.+++.+++
T Consensus 227 D~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~~~~ 305 (329)
T cd08298 227 DAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPEVET 305 (329)
T ss_pred cEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEecCCCHHHHHHHHHHHHcCCCCceEEE
Confidence 999998766557889999999999999887533221 12222 2456677877777777888999999999998875699
Q ss_pred eecccHHHHHHHHHcCCccEEEEE
Q 018382 325 IKMDYVNKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 325 ~~~~~~~~a~~~~~~~~~~Gkvvi 348 (357)
|+++++++|++.+++++..||+++
T Consensus 306 ~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 306 YPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred EeHHHHHHHHHHHHcCCCcceeeC
Confidence 999999999999999999999874
No 54
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.2e-40 Score=308.00 Aligned_cols=331 Identities=30% Similarity=0.467 Sum_probs=282.1
Q ss_pred eeehccCCCCC-cceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382 11 IGWAAKDPSGI-LSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVG 88 (357)
Q Consensus 11 ~~~~~~~~~~~-~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (357)
+++.+....++ +...+.+.|.++++||+|++.++++|+.|+....|.++ ...+|.++|+|++|+|+++|++++.|++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~G 81 (338)
T cd08254 2 KAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVG 81 (338)
T ss_pred eeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCCC
Confidence 45555433444 67778899999999999999999999999999988765 34457789999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382 89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV 168 (357)
Q Consensus 89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta 168 (357)
|+|+..+. .+||+|..|..++.+.|..+.+. |....|++++|+.++.+.++++|+++++++++.++..+.+|
T Consensus 82 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta 153 (338)
T cd08254 82 DRVAVPAV-IPCGACALCRRGRGNLCLNQGMP-------GLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTP 153 (338)
T ss_pred CEEEECCC-CCCCCChhhhCcCcccCCCCCcc-------ccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHH
Confidence 99977665 47999999999999999654432 33467999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh-CC
Q 018382 169 FSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA-DS 244 (357)
Q Consensus 169 ~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~-~~ 244 (357)
|.++.....++++++|||+|+|.+|++++++|+..|++|+++++++++.+.+++ +|.+++++..+..... ... ++
T Consensus 154 ~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd08254 154 YHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKE-LGADEVLNSLDDSPKDKKAAGLGGG 232 (338)
T ss_pred HHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-hCCCEEEcCCCcCHHHHHHHhcCCC
Confidence 999988888899999999888999999999999999999999999999888866 9998888776543322 122 37
Q ss_pred ccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEE
Q 018382 245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEV 324 (357)
Q Consensus 245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~ 324 (357)
+|+++|+++....+..++++++++|+++.++.......++...++.++.++.+++....+.+..++++++++.+.+.+++
T Consensus 233 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~ 312 (338)
T cd08254 233 FDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQVET 312 (338)
T ss_pred ceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccccee
Confidence 99999999876578899999999999999987655455566667788889998887777889999999999998876789
Q ss_pred eecccHHHHHHHHHcCCccEEEEEec
Q 018382 325 IKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 325 ~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
+++++++++++.+++++..||+++++
T Consensus 313 ~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 313 RPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred EcHHHHHHHHHHHHcCCccceEEEeC
Confidence 99999999999999999999999864
No 55
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.6e-40 Score=307.31 Aligned_cols=328 Identities=27% Similarity=0.403 Sum_probs=271.0
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
|++|... .++.+++.++++|++.++|++||+.++++|+.|+.+..+..+...+|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~-~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCE-KPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEe-CCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 3555554 346788899999999999999999999999999999988766545677899999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF 169 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~ 169 (357)
+|+.. ..+.||.|..|+.+.+|.|...... +....|+|++|+.++++ ++++|+++++++++++ ..+.+++
T Consensus 80 ~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~ 149 (337)
T cd08261 80 RVVVD-PYISCGECYACRKGRPNCCENLQVL-------GVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGA 149 (337)
T ss_pred EEEEC-CCCCCCCChhhhCcCcccCCCCCee-------eecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHH
Confidence 99664 4457999999999999999532211 11247899999999999 9999999999999877 5677888
Q ss_pred hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---HhhC--C
Q 018382 170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAAD--S 244 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~~--~ 244 (357)
.++ ....++++++|||+|+|.+|.+++|+|+..|++|+++++++++.+.+++ +|+++++++++.+..+ .... +
T Consensus 150 ~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~-~g~~~v~~~~~~~~~~~l~~~~~~~~ 227 (337)
T cd08261 150 HAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEFARE-LGADDTINVGDEDVAARLRELTDGEG 227 (337)
T ss_pred HHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHH-hCCCEEecCcccCHHHHHHHHhCCCC
Confidence 887 5566799999999988999999999999999999999999888888866 9999999887654323 3322 6
Q ss_pred ccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--cE
Q 018382 245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--MI 322 (357)
Q Consensus 245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~i 322 (357)
+|++||+.|+...+..++++++++|+++.++.......+....+..+++++.+......+.++.++++++++.+++ .+
T Consensus 228 vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~ 307 (337)
T cd08261 228 ADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALI 307 (337)
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhhe
Confidence 9999999987547888999999999999988665433444445566777887776555568899999999999987 55
Q ss_pred -EEeecccHHHHHHHHHcC-CccEEEEEec
Q 018382 323 -EVIKMDYVNKAFERLEKN-DVRYRFVVDV 350 (357)
Q Consensus 323 -~~~~~~~~~~a~~~~~~~-~~~Gkvvi~~ 350 (357)
.+|+++++++|++.++++ ...+|+|+++
T Consensus 308 ~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 308 THRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred EEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 899999999999999988 4779999864
No 56
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=1.7e-40 Score=306.22 Aligned_cols=328 Identities=43% Similarity=0.717 Sum_probs=279.3
Q ss_pred eehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEE
Q 018382 12 GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKV 91 (357)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V 91 (357)
++...+.++.+.+.+++.|.+.++|++|++.++++|++|+..+.|..+...+|.++|+|++|+|+++|+++.+|++||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V 81 (330)
T cd08245 2 AAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRV 81 (330)
T ss_pred eEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCEE
Confidence 45555555689999999999999999999999999999999998876544567889999999999999999999999999
Q ss_pred EEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhh
Q 018382 92 GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSP 171 (357)
Q Consensus 92 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~ 171 (357)
++.+....||.|..|.++..+.|++..+. +....|++++|+.++.++++++|+++++++++.+++.+.+||.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~ 154 (330)
T cd08245 82 GVGWLVGSCGRCEYCRRGLENLCQKAVNT-------GYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA 154 (330)
T ss_pred EEccccCCCCCChhhhCcCcccCcCcccc-------CcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence 87666567999999999999999985432 22247899999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEc
Q 018382 172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDT 251 (357)
Q Consensus 172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~ 251 (357)
+.. ..++++++|||+|+|.+|++++++|+..|++|+++++++++.+.+.+ +|++.+++...........+++|++|++
T Consensus 155 l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (330)
T cd08245 155 LRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELARK-LGADEVVDSGAELDEQAAAGGADVILVT 232 (330)
T ss_pred HHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hCCcEEeccCCcchHHhccCCCCEEEEC
Confidence 877 45699999999988889999999999999999999999999888866 9998888766544333333579999999
Q ss_pred CCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccEEEeecccH
Q 018382 252 VPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYV 330 (357)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~ 330 (357)
++.......++++++++|+++.++..... ..+....++.++.++.++.....+.++.+++++.++.+.+.++.|+++++
T Consensus 233 ~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~ 312 (330)
T cd08245 233 VVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPMIETFPLDQA 312 (330)
T ss_pred CCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcceEEEEcHHHH
Confidence 88655788999999999999999865433 22224456678888988888777889999999999999876689999999
Q ss_pred HHHHHHHHcCCccEEEEE
Q 018382 331 NKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 331 ~~a~~~~~~~~~~Gkvvi 348 (357)
++|++.+++++..||+++
T Consensus 313 ~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 313 NEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHcCCCCcceeC
Confidence 999999999999999875
No 57
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.3e-40 Score=311.31 Aligned_cols=337 Identities=26% Similarity=0.460 Sum_probs=277.6
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCC---CC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSN---FK 86 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~---~~ 86 (357)
|++|++...+.++++.++++|.+.++||+||+.++++|++|+++..+.++. .+|.++|||++|+|+.+|+++++ |+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 457777655566888999999999999999999999999999998887653 56789999999999999999988 99
Q ss_pred CCCEEEEccccCCCCCCcccccCcccccccccccCc-c-ccCCC-------------CCCCCccceEEEeeCcceEECCC
Q 018382 87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYN-D-VYTDG-------------KPTQGGFAESMVVDQKFVVKIPD 151 (357)
Q Consensus 87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~-~~~~~-------------~~~~G~~~~~~~v~~~~~~~lP~ 151 (357)
+||+|++.+.. .||.|..|..+.+++|+++.++.. + ..+.| ....|++++|+.++.+.++++|+
T Consensus 80 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~ 158 (367)
T cd08263 80 VGDRVVGSFIM-PCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPE 158 (367)
T ss_pred CCCEEEEcCCC-CCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCC
Confidence 99999765444 699999999999999997642100 0 00000 12468999999999999999999
Q ss_pred CCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEE
Q 018382 152 GMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYL 230 (357)
Q Consensus 152 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv 230 (357)
++++++++.++..+.|||.++.+...+.++++|||+|+|++|++++++|+..|++ |+++++++++.+.+++ +|+++++
T Consensus 159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~-~g~~~v~ 237 (367)
T cd08263 159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKE-LGATHTV 237 (367)
T ss_pred CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCCceEe
Confidence 9999999999999999999998888878999999998899999999999999997 8888888888887766 9999999
Q ss_pred cCCChhHHHH---hh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--CcccchHHHhhccceEEEEeecC-
Q 018382 231 VSSDATRMQE---AA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFLTPMVMLGRKAITGSFIGS- 302 (357)
Q Consensus 231 ~~~~~~~~~~---~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~- 302 (357)
+.+..+..++ .. .++|++||++++......++++++++|+++.++.... ...+....++.++.++.++....
T Consensus 238 ~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (367)
T cd08263 238 NAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGARP 317 (367)
T ss_pred cCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCCCc
Confidence 8876544332 22 3699999999985467889999999999999986543 23344455556888887765433
Q ss_pred HHHHHHHHHHHHhcCCCcc--E-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 303 MKETKEMLEFCREKGVTSM--I-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 303 ~~~~~~~~~~~~~~~l~~~--i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
.+.++.++++++++.+++. + ++|+++++.+|++.+++++..||+|++
T Consensus 318 ~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 318 RQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred HHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 3678899999999998863 5 889999999999999999988999874
No 58
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=3.9e-40 Score=308.80 Aligned_cols=333 Identities=23% Similarity=0.290 Sum_probs=268.1
Q ss_pred eeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 11 IGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
++|++. ++++++++++|+|++ .++||+||++++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.|++||
T Consensus 2 ~~~~~~-~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (375)
T cd08282 2 KAVVYG-GPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVGD 79 (375)
T ss_pred ceEEEe-cCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCCC
Confidence 466654 466899999999996 899999999999999999999988765 34688999999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccc---cCCCCCCCCccceEEEeeCc--ceEECCCCCCcc---ccccc
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDV---YTDGKPTQGGFAESMVVDQK--FVVKIPDGMALE---QAAPL 161 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~---~aa~~ 161 (357)
+|++.+ ..+||.|..|..+..+.|.+..+.+.+. +..+....|+|++|++++.+ .++++|++++++ +++++
T Consensus 80 ~V~~~~-~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~ 158 (375)
T cd08282 80 RVVVPF-NVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLML 158 (375)
T ss_pred EEEEeC-CCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeee
Confidence 996654 4459999999999999998743322111 11112346999999999976 899999999998 57888
Q ss_pred cchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH
Q 018382 162 LCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240 (357)
Q Consensus 162 ~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~ 240 (357)
+..+.+||.++ ....+++|++|+|.|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++ .++.++.+..+.
T Consensus 159 ~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~ 235 (375)
T cd08282 159 SDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAES-IGAI-PIDFSDGDPVEQ 235 (375)
T ss_pred cchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCe-EeccCcccHHHH
Confidence 88999999998 55566899999998889999999999999998 79998888888877776 9984 566665443333
Q ss_pred ---hh-CCccEEEEcCCCCC-----------ChHHHHhccccCCeEEEEccCCCC-------------cccchHHHhhcc
Q 018382 241 ---AA-DSLDYIIDTVPANH-----------PLEPYLSLLKLDGKLILTGVINTP-------------MQFLTPMVMLGR 292 (357)
Q Consensus 241 ---~~-~~~d~v~d~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~~-------------~~~~~~~~~~~~ 292 (357)
+. +++|++|||+|... .+..++++++++|+++.+|..... ..++...++.++
T Consensus 236 i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (375)
T cd08282 236 ILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKG 315 (375)
T ss_pred HHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcC
Confidence 22 37999999999762 278899999999999887754311 223445566677
Q ss_pred ceEEEEeecCHHHHHHHHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 293 KAITGSFIGSMKETKEMLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 293 ~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
..+.+......+.+..+++++.++.+++ .+ ++|+++++++|++.+.+++ .+|+++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 316 LSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred cEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 7777776656677889999999999986 25 9999999999999999988 89999853
No 59
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=2.5e-40 Score=307.57 Aligned_cols=328 Identities=21% Similarity=0.306 Sum_probs=264.1
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---------CCCCCCccCccccEEEEEeCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---------MSNYPMVPGHEVVGEVKEVGS 80 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---------~~~~p~~lG~e~~G~V~~vG~ 80 (357)
|++++.. +++.+++++++.|++.++||+||+.++++|+.|++.+.|... ..++|.++|+|++|+|+++|+
T Consensus 1 mka~~~~-~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCH-GPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEe-cCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 3566665 466799999999999999999999999999999998887531 114577899999999999999
Q ss_pred CCC--CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc-ceEECCCCCCccc
Q 018382 81 EVS--NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK-FVVKIPDGMALEQ 157 (357)
Q Consensus 81 ~v~--~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~-~~~~lP~~l~~~~ 157 (357)
+++ +|++||+|++. ....|+.|..|..|.++.|....+ .+.. ....|+|++|+.++++ .++++|+++++++
T Consensus 80 ~v~~~~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~g~~---~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~ 153 (350)
T cd08256 80 GAEERGVKVGDRVISE-QIVPCWNCRFCNRGQYWMCQKHDL--YGFQ---NNVNGGMAEYMRFPKEAIVHKVPDDIPPED 153 (350)
T ss_pred CcccCCCCCCCEEEEC-CcCCCCCChHHhCcCcccCcCccc--eeec---cCCCCcceeeEEcccccceEECCCCCCHHH
Confidence 999 89999999654 566799999999999999975432 1110 1257999999999988 6789999999999
Q ss_pred cccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChh
Q 018382 158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDAT 236 (357)
Q Consensus 158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~ 236 (357)
++.+ ..+.++|.++ ....++++++|+|.|+|.+|++++++|+.+|++ ++++++++++.+.+.+ +|++++++.+..+
T Consensus 154 aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~ 230 (350)
T cd08256 154 AILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK-FGADVVLNPPEVD 230 (350)
T ss_pred Hhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH-cCCcEEecCCCcC
Confidence 9988 8889999998 555669999999977799999999999999985 6667777777766666 9999998876543
Q ss_pred H---HHHhhC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHH-hhccceEEEEeecCHHHHHHHH
Q 018382 237 R---MQEAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMV-MLGRKAITGSFIGSMKETKEML 310 (357)
Q Consensus 237 ~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~ 310 (357)
. +..... ++|++||++|....+..++++++++|+++.+|.......+....+ ..++.++.++.... ..+.+++
T Consensus 231 ~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~ 309 (350)
T cd08256 231 VVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGP-YCYPIAI 309 (350)
T ss_pred HHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCc-hhHHHHH
Confidence 3 333333 699999999965467889999999999999986544333333332 35677787776543 4688899
Q ss_pred HHHHhcCCCcc--E-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382 311 EFCREKGVTSM--I-EVIKMDYVNKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 311 ~~~~~~~l~~~--i-~~~~~~~~~~a~~~~~~~~~~Gkvvi 348 (357)
+++.++.+++. + ++|+++++++|++.+++++..+|+++
T Consensus 310 ~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 310 DLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred HHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 99999999872 5 89999999999999999988899874
No 60
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=4.6e-40 Score=305.22 Aligned_cols=331 Identities=24% Similarity=0.362 Sum_probs=272.0
Q ss_pred eeeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (357)
|+++++. +++.+++++++.|+| .++||+||++++++|++|+..+.|.++...+|.++|||++|+|+++|++++++++|
T Consensus 1 m~a~~~~-~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYH-GPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEe-cCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 3456655 355688999999996 89999999999999999999999876655557899999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc--ceEECCCCCCccccccccchhh
Q 018382 89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMALEQAAPLLCAGV 166 (357)
Q Consensus 89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~~aa~~~~~~~ 166 (357)
|+|++.+.. +|+.|..|..+..+.|....+.. |...+|++++|+.++.+ .++++|++++.++++.++..++
T Consensus 80 d~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ 152 (345)
T cd08286 80 DRVLISCIS-SCGTCGYCRKGLYSHCESGGWIL------GNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILP 152 (345)
T ss_pred CEEEECCcC-CCCCChHHHCcCcccCCCccccc------ccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhH
Confidence 999665444 69999999999999998765531 22357999999999987 8999999999999999999999
Q ss_pred hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh
Q 018382 167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA 242 (357)
Q Consensus 167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~ 242 (357)
+||.++.....++++++|||.|+|++|.+++|+|+..| .+|+++.+++++...+++ +|++++++.+..+..+ ...
T Consensus 153 ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~i~~~~ 231 (345)
T cd08286 153 TGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKK-LGATHTVNSAKGDAIEQVLELT 231 (345)
T ss_pred HHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCCceeccccccHHHHHHHHh
Confidence 99998766667799999999988999999999999999 689998887777776666 9999999877543322 222
Q ss_pred --CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382 243 --DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320 (357)
Q Consensus 243 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~ 320 (357)
.++|++||+++....+..+++.++++|+++.+|.......++...++.++.++.+.... .+.++.++++++++.+++
T Consensus 232 ~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 310 (345)
T cd08286 232 DGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVD-TNTTPMLLKLVSSGKLDP 310 (345)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCc-hhhHHHHHHHHHcCCCCh
Confidence 27999999998754678888999999999999875444445555667788888876543 356888999999998875
Q ss_pred --cE-EEeecccHHHHHHHHHcCCc--cEEEEEec
Q 018382 321 --MI-EVIKMDYVNKAFERLEKNDV--RYRFVVDV 350 (357)
Q Consensus 321 --~i-~~~~~~~~~~a~~~~~~~~~--~Gkvvi~~ 350 (357)
.+ ++|+++++++|++.+++... ..|++|++
T Consensus 311 ~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 311 SKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred HHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 25 89999999999999987643 35888864
No 61
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=2.9e-40 Score=306.05 Aligned_cols=329 Identities=26% Similarity=0.344 Sum_probs=263.3
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC---CCCCCCCccCccccEEEEEeCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL---GMSNYPMVPGHEVVGEVKEVGSEVSNFK 86 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~---~~~~~p~~lG~e~~G~V~~vG~~v~~~~ 86 (357)
|++|.+.++++.+++.++|.|+|+++||+||++++++|++|++++.+.. +...+|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 3567666566779999999999999999999999999999999876632 2234677899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382 87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV 166 (357)
Q Consensus 87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ 166 (357)
+||+|+..+.. .|+.|..|..+++++|+.... . +...+|+|++|+.++.+.++++|+++++++++.+ ..+.
T Consensus 81 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~ 151 (341)
T PRK05396 81 VGDRVSGEGHI-VCGHCRNCRAGRRHLCRNTKG--V-----GVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFG 151 (341)
T ss_pred CCCEEEECCCC-CCCCChhhhCcChhhCCCcce--e-----eecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHH
Confidence 99999776555 689999999999999986421 1 2336799999999999999999999999988744 4555
Q ss_pred hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH---HHHhh
Q 018382 167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATR---MQEAA 242 (357)
Q Consensus 167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~ 242 (357)
+++.++.. . ..+|++|+|.|+|++|++++|+|+..|+ +|+++.+++++.+.+.+ +|+++++++++.+. +..+.
T Consensus 152 ~~~~~~~~-~-~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~ 228 (341)
T PRK05396 152 NAVHTALS-F-DLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARK-MGATRAVNVAKEDLRDVMAELG 228 (341)
T ss_pred HHHHHHHc-C-CCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-hCCcEEecCccccHHHHHHHhc
Confidence 55555433 2 2689999999889999999999999999 68888878888777776 99999998876443 33333
Q ss_pred --CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecC-HHHHHHHHHHHHhc-CC
Q 018382 243 --DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGS-MKETKEMLEFCREK-GV 318 (357)
Q Consensus 243 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~~~~~~~~~~-~l 318 (357)
+++|++|||.|....+..++++++++|+++.+|.......+....++.++.++.++.... .+.+..+++++.++ .+
T Consensus 229 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (341)
T PRK05396 229 MTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSGLDL 308 (341)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcCCCh
Confidence 379999999987657888999999999999998765444444556677888888765322 23456778888888 45
Q ss_pred CccE-EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382 319 TSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVA 351 (357)
Q Consensus 319 ~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~ 351 (357)
.+.+ ++|+++++++|++.+++++ .||++++.+
T Consensus 309 ~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 309 SPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred hHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 4555 8999999999999999887 799998753
No 62
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=2.6e-40 Score=305.93 Aligned_cols=302 Identities=23% Similarity=0.222 Sum_probs=246.0
Q ss_pred eeeehccCCC-CCcceeeeec----CCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccc--cEEEEEeCCC
Q 018382 10 TIGWAAKDPS-GILSPYTYTL----RNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEV--VGEVKEVGSE 81 (357)
Q Consensus 10 ~~~~~~~~~~-~~~~~~~~~~----p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~--~G~V~~vG~~ 81 (357)
.++|...+++ ..|++++.++ |+|+++||||||+++++||.|++...|..+. ..+|.++|+++ .|++..+|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~ 87 (338)
T cd08295 8 LKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG 87 (338)
T ss_pred EecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence 4566653333 4688888877 8899999999999999999999998885432 35577888754 5666668899
Q ss_pred CCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeC-cceEECC-CCCCcc-cc
Q 018382 82 VSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFVVKIP-DGMALE-QA 158 (357)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~-~~~~~lP-~~l~~~-~a 158 (357)
+++|++||+|+. .|+|+||+++++ ..++++| ++++++ ++
T Consensus 88 v~~~~vGd~V~~--------------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~a 129 (338)
T cd08295 88 NPDFKVGDLVWG--------------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYL 129 (338)
T ss_pred CCCCCCCCEEEe--------------------------------------cCCceeEEEecchhceeecCCCCCCHHHHH
Confidence 999999999952 368999999999 8999995 678887 79
Q ss_pred ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-h
Q 018382 159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-T 236 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~ 236 (357)
+++++++.|||+++.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++.+|+++++++++. +
T Consensus 130 a~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~ 209 (338)
T cd08295 130 GLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPD 209 (338)
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCccc
Confidence 9999999999999988777799999999987 9999999999999999999999998888888766999999986542 3
Q ss_pred H---HHHhh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCc------ccchHHHhhccceEEEEeecCH---
Q 018382 237 R---MQEAA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPM------QFLTPMVMLGRKAITGSFIGSM--- 303 (357)
Q Consensus 237 ~---~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~i~g~~~~~~--- 303 (357)
. +.+.. +++|++||++|+. .+..++++++++|+++.+|...... ..+...++.++.++.++.....
T Consensus 210 ~~~~i~~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 288 (338)
T cd08295 210 LDAALKRYFPNGIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHR 288 (338)
T ss_pred HHHHHHHhCCCCcEEEEECCCHH-HHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHH
Confidence 3 22322 3899999999986 8899999999999999998654321 1233456677788888655332
Q ss_pred --HHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 304 --KETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 304 --~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
+.++++++++.++.+++.+ ..|+++++++|++.+++++..||+++++
T Consensus 289 ~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 289 YPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 3467889999999998866 7899999999999999999999999874
No 63
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=9.6e-40 Score=302.83 Aligned_cols=326 Identities=25% Similarity=0.380 Sum_probs=272.9
Q ss_pred eeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCE
Q 018382 11 IGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDK 90 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (357)
++|.+. ..+.+.+++.++|++.+++|+||++++++|+.|+.++.|.++....|.++|+|++|+|+++|++++.|++||+
T Consensus 2 ~~~~~~-~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~ 80 (343)
T cd08235 2 KAAVLH-GPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDR 80 (343)
T ss_pred eEEEEe-cCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCCE
Confidence 566654 4567888999999999999999999999999999998886643345778999999999999999999999999
Q ss_pred EEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcc-----eEECCCCCCccccccccchh
Q 018382 91 VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKF-----VVKIPDGMALEQAAPLLCAG 165 (357)
Q Consensus 91 V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~-----~~~lP~~l~~~~aa~~~~~~ 165 (357)
|++.+ ...|+.|..|..+..+.|+...+. |....|+|++|+.++.+. ++++|+++++++++.+ ..+
T Consensus 81 V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~ 151 (343)
T cd08235 81 VFVAP-HVPCGECHYCLRGNENMCPNYKKF-------GNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPL 151 (343)
T ss_pred EEEcc-CCCCCCChHHHCcCcccCCCccee-------ccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHH
Confidence 97764 445889999999999999876433 234679999999999998 9999999999999866 788
Q ss_pred hhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---h
Q 018382 166 VTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---A 241 (357)
Q Consensus 166 ~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~ 241 (357)
.+||+++... .++++++|||+|+|.+|++++|+|+..|++ |+++++++++.+.+.+ +|.++++++++.+.... .
T Consensus 152 ~~a~~~l~~~-~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~ 229 (343)
T cd08235 152 ACCINAQRKA-GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKK-LGADYTIDAAEEDLVEKVREL 229 (343)
T ss_pred HHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCcEEecCCccCHHHHHHHH
Confidence 9999998766 679999999998899999999999999998 8888888888888866 99999998877554333 3
Q ss_pred hC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC--cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcC
Q 018382 242 AD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKG 317 (357)
Q Consensus 242 ~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 317 (357)
.. ++|++||+++....+..++++++++|+++.++..... ..+....+..++.++.++.....+.++.+++++.++.
T Consensus 230 ~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~ 309 (343)
T cd08235 230 TDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGK 309 (343)
T ss_pred hCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCC
Confidence 32 6999999999754778899999999999998865432 2334455667888888887777788899999999999
Q ss_pred CCc--cE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 318 VTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 318 l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
+.+ .+ .+|+++++++|++.+.+++ .||+|+.
T Consensus 310 l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 310 IDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred CChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 873 34 8899999999999999999 8999874
No 64
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=5.5e-40 Score=302.20 Aligned_cols=318 Identities=26% Similarity=0.357 Sum_probs=262.6
Q ss_pred eeehccCC-CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 11 IGWAAKDP-SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 11 ~~~~~~~~-~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
++++...+ ...+++++.+.|+++++||+||+.++++|++|++.+.+. +...+|.++|||++|+|+++|++++.|++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (325)
T cd08264 2 KALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKGD 80 (325)
T ss_pred eeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCCC
Confidence 45555322 356778888888899999999999999999999987642 2223467899999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF 169 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~ 169 (357)
+|++.+.. +|+.|..|..|..+.|.++.+. +....|+|++|+.++++.++++|+++++++++.+++.+.+||
T Consensus 81 ~V~~~~~~-~~~~c~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~ 152 (325)
T cd08264 81 RVVVYNRV-FDGTCDMCLSGNEMLCRNGGII-------GVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAY 152 (325)
T ss_pred EEEECCCc-CCCCChhhcCCCccccCcccee-------eccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHH
Confidence 99877655 7999999999999999976532 233579999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-hHHHHhhCCccE
Q 018382 170 SPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-TRMQEAADSLDY 247 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~~~~d~ 247 (357)
+++.. ..++++++|+|+|+ |++|++++++|+..|++|+++++ .+.+++ +|++++++.++. +.+..+.+++|+
T Consensus 153 ~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~-~g~~~~~~~~~~~~~l~~~~~~~d~ 226 (325)
T cd08264 153 HALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKE-FGADEVVDYDEVEEKVKEITKMADV 226 (325)
T ss_pred HHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHH-hCCCeeecchHHHHHHHHHhCCCCE
Confidence 99876 56699999999997 99999999999999999988863 355655 999888876542 223333378999
Q ss_pred EEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-EEe
Q 018382 248 IIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EVI 325 (357)
Q Consensus 248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~~~ 325 (357)
+++++|.. .+..++++++++|+++.+|.... ...++...++.++.++.++..+..+.++.+++++... +..+ ++|
T Consensus 227 vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~ 303 (325)
T cd08264 227 VINSLGSS-FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDL--KVKVWKTF 303 (325)
T ss_pred EEECCCHH-HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcC--CceeEEEE
Confidence 99999986 88999999999999999986422 2445556667788889998888888899999999543 3445 899
Q ss_pred ecccHHHHHHHHHcCCccEEE
Q 018382 326 KMDYVNKAFERLEKNDVRYRF 346 (357)
Q Consensus 326 ~~~~~~~a~~~~~~~~~~Gkv 346 (357)
+++++++|++.+.+++..||+
T Consensus 304 ~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 304 KLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred cHHHHHHHHHHHHcCCCcccc
Confidence 999999999999988877775
No 65
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=9.4e-40 Score=303.00 Aligned_cols=330 Identities=24% Similarity=0.302 Sum_probs=269.0
Q ss_pred eeeehccCCCCCcceeeeecCCCC-CCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTG-AEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~-~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (357)
|++|+.. +++.++++++++|+|. ++||+|++.++++|+.|+.+..|.++ ..+|.++|+|++|+|+++|++++++++|
T Consensus 1 ~~a~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFK-GPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEe-cCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 3566665 4568999999999985 99999999999999999999888665 3457789999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc--ceEECCCCCCccccccccchhh
Q 018382 89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMALEQAAPLLCAGV 166 (357)
Q Consensus 89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~~aa~~~~~~~ 166 (357)
|+|++.+.. +|++|..|..+.++.|++....+.. .....+|++++|+.++++ .++++|++++++++++++..+.
T Consensus 79 d~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ 154 (344)
T cd08284 79 DRVVSPFTI-ACGECFYCRRGQSGRCAKGGLFGYA---GSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILP 154 (344)
T ss_pred CEEEEcccC-CCCCChHHhCcCcccCCCCcccccc---ccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchH
Confidence 999876554 5999999999999999875432110 011247999999999975 9999999999999999999999
Q ss_pred hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH---HHHhh
Q 018382 167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATR---MQEAA 242 (357)
Q Consensus 167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~ 242 (357)
|||+++.. ..+.++++|||+|+|.+|++++|+|+..|+ +|+++++++++...+.+ +|+. .++.+..++ +.++.
T Consensus 155 ta~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~l~~~~ 231 (344)
T cd08284 155 TGYFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAA-LGAE-PINFEDAEPVERVREAT 231 (344)
T ss_pred HHHhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH-hCCe-EEecCCcCHHHHHHHHh
Confidence 99999976 455899999999889999999999999997 89999878777777666 9975 355544322 33333
Q ss_pred --CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC
Q 018382 243 --DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT 319 (357)
Q Consensus 243 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~ 319 (357)
+++|++||+++....+..++++++++|+++.+|..... ........+.++.++.+......+.++.+++++.++.++
T Consensus 232 ~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 311 (344)
T cd08284 232 EGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLD 311 (344)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCC
Confidence 37999999999754788999999999999999876532 233444556777887765555567899999999999988
Q ss_pred c--cE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 320 S--MI-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 320 ~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
+ .+ ++|+++++++|++.+++++. ||+|++
T Consensus 312 ~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 312 LEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred hHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 5 35 89999999999999998887 999975
No 66
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.8e-39 Score=301.17 Aligned_cols=327 Identities=19% Similarity=0.259 Sum_probs=266.8
Q ss_pred eeeehccCCCCCcceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVG 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (357)
|++|.+. +++.+.+.+.|+|+| +++||+||+.++++|++|++.+.|.++. ..|.++|||++|+|+++|++++.|++|
T Consensus 1 m~~~~~~-~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIH-GPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEe-cCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 3566665 466799999999996 9999999999999999999998887652 457899999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc--ceEECCCCCCccccc-----cc
Q 018382 89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK--FVVKIPDGMALEQAA-----PL 161 (357)
Q Consensus 89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~lP~~l~~~~aa-----~~ 161 (357)
|+|++. ....||.|..|..+..+.|....+. +...+|+|++|+.++.+ .++++|++++++.+. ++
T Consensus 79 d~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l 150 (345)
T cd08287 79 DFVIAP-FAISDGTCPFCRAGFTTSCVHGGFW-------GAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLAL 150 (345)
T ss_pred CEEEec-cccCCCCChhhhCcCcccCCCCCcc-------cCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhh
Confidence 999663 3445999999999999999875543 23478999999999975 999999999983221 23
Q ss_pred cchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH
Q 018382 162 LCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240 (357)
Q Consensus 162 ~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~ 240 (357)
...+.+||.++.. ..++++++|+|.|+|++|++++|+|+..|++ ++++++++++.+.+++ +|++++++++..+..++
T Consensus 151 ~~~~~~a~~~~~~-~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~-~ga~~v~~~~~~~~~~~ 228 (345)
T cd08287 151 SDVMGTGHHAAVS-AGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALARE-FGATDIVAERGEEAVAR 228 (345)
T ss_pred hcHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCceEecCCcccHHHH
Confidence 3567889988864 4558999999988899999999999999995 7777777777766666 99999998876544343
Q ss_pred h---hC--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHh
Q 018382 241 A---AD--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCRE 315 (357)
Q Consensus 241 ~---~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 315 (357)
+ .. ++|++||++|+...+..++++++++|+++.++.......++....+.++.++.+......+.++++++++.+
T Consensus 229 i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (345)
T cd08287 229 VRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLA 308 (345)
T ss_pred HHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHc
Confidence 3 22 699999999876578899999999999999987654444555455678899988776667789999999999
Q ss_pred cCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 316 KGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 316 ~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
+.+++ .+ +.|+++++++|++.+++++.. |++|+
T Consensus 309 ~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 309 GRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred CCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 99986 34 899999999999998877664 99885
No 67
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.4e-39 Score=298.72 Aligned_cols=316 Identities=22% Similarity=0.299 Sum_probs=259.9
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
|+++++.+ ++++.+.+++.|+++++||+||++++++|++|+....|..+ .|.++|+|++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~-~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDG-GLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeC-CCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 35677654 56889999999999999999999999999999999888653 5778999999999999998 67999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF 169 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~ 169 (357)
+|...+.. .|+.|..|..|.++.|.+...... ...+|++++|++++.+.++++|++++.++++.+ ....++|
T Consensus 74 ~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~ 145 (319)
T cd08242 74 RVVGEINI-ACGRCEYCRRGLYTHCPNRTVLGI------VDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAAL 145 (319)
T ss_pred eEEECCCc-CCCCChhhhCcCcccCCCCcccCc------cCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHH
Confidence 99665554 599999999999999886542211 124799999999999999999999999988864 4445666
Q ss_pred hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEE
Q 018382 170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYII 249 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~ 249 (357)
.++ ....++++++|||+|+|.+|++++|+|+..|++|+++++++++.+.+++ +|++.+++.++. .-.+++|++|
T Consensus 146 ~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~----~~~~~~d~vi 219 (319)
T cd08242 146 EIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALARR-LGVETVLPDEAE----SEGGGFDVVV 219 (319)
T ss_pred HHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-cCCcEEeCcccc----ccCCCCCEEE
Confidence 655 4455689999999998999999999999999999999999999988888 999888776542 1224799999
Q ss_pred EcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC--ccE-EEee
Q 018382 250 DTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT--SMI-EVIK 326 (357)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~--~~i-~~~~ 326 (357)
|++|....+..++++++++|+++..+.......++...+..++.++.+...+. ++++++++.++.++ +.+ ++|+
T Consensus 220 d~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~ 296 (319)
T cd08242 220 EATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGP---FAPALRLLRKGLVDVDPLITAVYP 296 (319)
T ss_pred ECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEeccc---HHHHHHHHHcCCCChhhceEEEEe
Confidence 99988657888999999999999876654444455556677888888876543 77888999999984 456 9999
Q ss_pred cccHHHHHHHHHcCCccEEEEEec
Q 018382 327 MDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 327 ~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
++++++||+.++++. .+|++|+.
T Consensus 297 l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 297 LEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred HHHHHHHHHHHhcCC-ceEEEeCC
Confidence 999999999998776 48998863
No 68
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=3.2e-39 Score=299.10 Aligned_cols=317 Identities=23% Similarity=0.324 Sum_probs=254.1
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-----------CCCCCCccCccccEEEEEe
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-----------MSNYPMVPGHEVVGEVKEV 78 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-----------~~~~p~~lG~e~~G~V~~v 78 (357)
|+++++..+ .+++++++.|+++++||+||+.++++|+.|++...|... ....|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 356666533 788899999999999999999999999999999887321 2234778999999999999
Q ss_pred CCCCCC-CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccc
Q 018382 79 GSEVSN-FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQ 157 (357)
Q Consensus 79 G~~v~~-~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~ 157 (357)
|+++++ |++||+|+..++ ..|+.|..|..|.. ....|+|+||++++.+.++++|+++++++
T Consensus 79 G~~v~~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~-----------------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~ 140 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPL-LLCGQGASCGIGLS-----------------PEAPGGYAEYMLLSEALLLRVPDGLSMED 140 (341)
T ss_pred CCCCcCCCCCCCEEEecCC-cCCCCChhhhCCCC-----------------cCCCCceeeeEEechHHeEECCCCCCHHH
Confidence 999997 999999977755 45899999843210 12579999999999999999999999998
Q ss_pred cccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChh
Q 018382 158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDAT 236 (357)
Q Consensus 158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~ 236 (357)
++ ++..+++||+++ ....++++++|||+|+|++|.+++|+|+..|++ ++++++++++.+.+.+ +|++++++.+..+
T Consensus 141 a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~i~~~~~~ 217 (341)
T cd08262 141 AA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA-MGADIVVDPAADS 217 (341)
T ss_pred hh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-cCCcEEEcCCCcC
Confidence 77 677888999986 555669999999998899999999999999996 5566666777766665 9999999876542
Q ss_pred H------HHHhh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHH
Q 018382 237 R------MQEAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKE 308 (357)
Q Consensus 237 ~------~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 308 (357)
. +.... +++|++||++|+...+..++++++++|+++.+|...............++.++.++...+.+.+++
T Consensus 218 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (341)
T cd08262 218 PFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFAD 297 (341)
T ss_pred HHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHH
Confidence 1 11122 369999999987436788999999999999998764332222222345777777776667778899
Q ss_pred HHHHHHhcCCCc--cE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 309 MLEFCREKGVTS--MI-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 309 ~~~~~~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
+++++.++.+.+ .+ ++|+++++++|++.+++++..||++++
T Consensus 298 ~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 298 ALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred HHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 999999999975 34 899999999999999999999999874
No 69
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1.3e-39 Score=275.69 Aligned_cols=308 Identities=20% Similarity=0.262 Sum_probs=255.7
Q ss_pred hheeeehccCCC-CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCC
Q 018382 8 RATIGWAAKDPS-GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNF 85 (357)
Q Consensus 8 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~ 85 (357)
.+..++..++.| +.++++++++|.....+|+||..|+.|||+|+..++|.+| .+.+|.+-|.|++|+|+.+|+++.+|
T Consensus 20 ~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgf 99 (354)
T KOG0025|consen 20 SKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGF 99 (354)
T ss_pred cceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCcc
Confidence 333444444433 4578889999999888899999999999999999999999 67889999999999999999999999
Q ss_pred CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchh
Q 018382 86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAG 165 (357)
Q Consensus 86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~ 165 (357)
++||+|... ....|+|++|.+.+++.++++++.++++.||++....
T Consensus 100 k~Gd~VIp~----------------------------------~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP 145 (354)
T KOG0025|consen 100 KPGDWVIPL----------------------------------SANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNP 145 (354)
T ss_pred CCCCeEeec----------------------------------CCCCccceeeEeecccceEEcCCcCChhhhheeccCc
Confidence 999999543 3468999999999999999999999999999999999
Q ss_pred hhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHH---HhcCCcEEEcCCC---hhHH
Q 018382 166 VTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAM---EHLGADQYLVSSD---ATRM 238 (357)
Q Consensus 166 ~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~---~~~g~~~vv~~~~---~~~~ 238 (357)
+|||.+|.+.-.+++|++|+-.|+ +++|++.||+|+++|++-+.++|++...++++ +.+||++++...+ .+..
T Consensus 146 ~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~ 225 (354)
T KOG0025|consen 146 CTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMK 225 (354)
T ss_pred hHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhh
Confidence 999999999999999998888888 99999999999999999999998876554443 2489999985332 1222
Q ss_pred HHh--hCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecCH-----------H
Q 018382 239 QEA--ADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGSM-----------K 304 (357)
Q Consensus 239 ~~~--~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~-----------~ 304 (357)
+.. ...+...|||+|+. ......+.|..+|.++.+|..+. +..++...++++++.+.|+++..+ +
T Consensus 226 k~~~~~~~prLalNcVGGk-sa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~ 304 (354)
T KOG0025|consen 226 KFKGDNPRPRLALNCVGGK-SATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKE 304 (354)
T ss_pred hhhccCCCceEEEeccCch-hHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHH
Confidence 221 22799999999999 77888899999999999998764 467888889999999999998644 4
Q ss_pred HHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHH-cCCccEEEEEec
Q 018382 305 ETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLE-KNDVRYRFVVDV 350 (357)
Q Consensus 305 ~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~-~~~~~Gkvvi~~ 350 (357)
.+.++.++++.|+|+.+- ...+|++...|++... .-...||-+|.+
T Consensus 305 ~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 305 MIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred HHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 467888999999999876 8889999989888443 333336666654
No 70
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=3.2e-39 Score=296.84 Aligned_cols=301 Identities=23% Similarity=0.307 Sum_probs=252.7
Q ss_pred eeehccCCC---CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382 11 IGWAAKDPS---GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFK 86 (357)
Q Consensus 11 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~ 86 (357)
+++++...+ +.+++.+++.|.+.++||+||+.++++|++|++.+.|.++ ....|.++|||++|+|+++|+++++|+
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~ 81 (324)
T cd08292 2 RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGLQ 81 (324)
T ss_pred eeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCCC
Confidence 455554322 2377889999999999999999999999999999988765 334578899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382 87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV 166 (357)
Q Consensus 87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ 166 (357)
+||+|++. ...|+|++|+.++...++++|+++++++++.+++.+.
T Consensus 82 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ 126 (324)
T cd08292 82 VGQRVAVA-----------------------------------PVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPL 126 (324)
T ss_pred CCCEEEec-----------------------------------cCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHH
Confidence 99999753 1368999999999999999999999999999999999
Q ss_pred hhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh
Q 018382 167 TVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA 242 (357)
Q Consensus 167 ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~ 242 (357)
+||+++.. ..+++|++|||+|+ |.+|++++|+|+.+|++|+++++++++.+.+++ +|++++++.++.+..+ ...
T Consensus 127 ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~~ 204 (324)
T cd08292 127 SALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-LGIGPVVSTEQPGWQDKVREAA 204 (324)
T ss_pred HHHHHHHh-hCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-cCCCEEEcCCCchHHHHHHHHh
Confidence 99998865 56699999999986 999999999999999999999999998888887 8999998887654433 333
Q ss_pred C--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecC----------HHHHHHH
Q 018382 243 D--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGS----------MKETKEM 309 (357)
Q Consensus 243 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~~ 309 (357)
. ++|++||++|+. ....++++++++|+++.+|.... ...+.....+.++.++.++.... .+.++++
T Consensus 205 ~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (324)
T cd08292 205 GGAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAEL 283 (324)
T ss_pred CCCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHH
Confidence 3 799999999987 78899999999999999986532 23344444567888988887642 2457889
Q ss_pred HHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 310 LEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 310 ~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
++++.++.+.+.+ ++|+++++.+|++.+.++...||++++
T Consensus 284 ~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 284 LTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 9999999998666 899999999999999988888999874
No 71
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.9e-39 Score=298.06 Aligned_cols=320 Identities=24% Similarity=0.359 Sum_probs=261.4
Q ss_pred CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcC-CC--CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEc
Q 018382 18 PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKND-LG--MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94 (357)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~-~~--~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~ 94 (357)
++..+.+++++.|.|.++||+||+.++++|+.|++.+.+. .+ ....|.++|+|++|+|+++|+++++|++||+|++.
T Consensus 6 ~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 85 (343)
T cd05285 6 GPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIE 85 (343)
T ss_pred cCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEc
Confidence 3467888999999999999999999999999999876432 11 11356689999999999999999999999999766
Q ss_pred cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhc
Q 018382 95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH 174 (357)
Q Consensus 95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~ 174 (357)
+.. +|++|..|+.|..+.|++..+.. .....|+|++|++++.+.++++|+++++++++.+ ..+.+||+++ .
T Consensus 86 ~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~ 156 (343)
T cd05285 86 PGV-PCRTCEFCKSGRYNLCPDMRFAA------TPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-R 156 (343)
T ss_pred ccc-CCCCChhHhCcCcccCcCccccc------cccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-H
Confidence 444 79999999999999998643311 1124799999999999999999999999999876 5778899887 5
Q ss_pred cCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhH------HHHhhC--Cc
Q 018382 175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATR------MQEAAD--SL 245 (357)
Q Consensus 175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~------~~~~~~--~~ 245 (357)
...++++++|||+|+|.+|++++|+|+..|++ |+++++++++.+.+++ +|++++++.++.+. +.+... ++
T Consensus 157 ~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T cd05285 157 RAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKE-LGATHTVNVRTEDTPESAEKIAELLGGKGP 235 (343)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-cCCcEEeccccccchhHHHHHHHHhCCCCC
Confidence 56669999999998899999999999999997 8888888888888866 99999998776432 333332 59
Q ss_pred cEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC--ccE-
Q 018382 246 DYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT--SMI- 322 (357)
Q Consensus 246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~--~~i- 322 (357)
|++|||.|....+...+++++++|+++.++.......++...+..+..++.++.... +.++.+++++.++.+. +.+
T Consensus 236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~~ 314 (343)
T cd05285 236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYA-NTYPTAIELLASGKVDVKPLIT 314 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccCh-HHHHHHHHHHHcCCCCchHhEE
Confidence 999999997546788999999999999998654433444445667788888776544 6788899999999875 344
Q ss_pred EEeecccHHHHHHHHHcCC-ccEEEEE
Q 018382 323 EVIKMDYVNKAFERLEKND-VRYRFVV 348 (357)
Q Consensus 323 ~~~~~~~~~~a~~~~~~~~-~~Gkvvi 348 (357)
++|+++++.+|++.+.+++ ..+|++|
T Consensus 315 ~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 315 HRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred EEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 8999999999999999885 4589988
No 72
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=8.4e-39 Score=298.78 Aligned_cols=321 Identities=24% Similarity=0.367 Sum_probs=256.1
Q ss_pred CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEc
Q 018382 18 PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94 (357)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~ 94 (357)
++..+++++++.|+|.++||+||+.++++|++|++++.+... ....|.++|||++|+|+++|+++++|++||+|++.
T Consensus 25 ~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 104 (364)
T PLN02702 25 GVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALE 104 (364)
T ss_pred cCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEc
Confidence 356788889999999999999999999999999998876321 12357789999999999999999999999999776
Q ss_pred cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhc
Q 018382 95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH 174 (357)
Q Consensus 95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~ 174 (357)
+.. +|+.|..|..|..+.|+...+.. ....+|+|++|++++.+.++++|++++++++++. ..+.++|.++ .
T Consensus 105 ~~~-~~~~c~~c~~g~~~~c~~~~~~~------~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~ 175 (364)
T PLN02702 105 PGI-SCWRCNLCKEGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-R 175 (364)
T ss_pred CCC-CCCCCcchhCcCcccCCCccccC------CCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-H
Confidence 654 69999999999999998643221 1124799999999999999999999999998752 2344577777 4
Q ss_pred cCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCC--ChhH---HHHh----hCC
Q 018382 175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSS--DATR---MQEA----ADS 244 (357)
Q Consensus 175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~--~~~~---~~~~----~~~ 244 (357)
...+.++++|+|+|+|++|++++|+|+..|++ |+++++++++.+.+++ +|++++++.. ..+. +..+ .++
T Consensus 176 ~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (364)
T PLN02702 176 RANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQ-LGADEIVLVSTNIEDVESEVEEIQKAMGGG 254 (364)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEEecCcccccHHHHHHHHhhhcCCC
Confidence 45558999999999899999999999999995 6667777777776666 9998877643 2222 2222 137
Q ss_pred ccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC--ccE
Q 018382 245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT--SMI 322 (357)
Q Consensus 245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~--~~i 322 (357)
+|++||++|....+..++++++++|+++.+|.......+.......+++++.+++.. ...++.++++++++.+. +.+
T Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~l~~~~~~ 333 (364)
T PLN02702 255 IDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRY-RNTWPLCLEFLRSGKIDVKPLI 333 (364)
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccC-hHHHHHHHHHHHcCCCCchHhe
Confidence 999999999654789999999999999999865443334455667788899887754 35788899999999886 345
Q ss_pred -EEeec--ccHHHHHHHHHcCCccEEEEEe
Q 018382 323 -EVIKM--DYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 323 -~~~~~--~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
++|++ +++++|++.+++++..+|+++.
T Consensus 334 ~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 334 THRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred EEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 78665 7999999999998888999985
No 73
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=7.8e-39 Score=295.93 Aligned_cols=330 Identities=25% Similarity=0.333 Sum_probs=276.6
Q ss_pred eeehcc--CCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382 11 IGWAAK--DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKV 87 (357)
Q Consensus 11 ~~~~~~--~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (357)
+++... +.+..+.+.+.+.|.+.+++|+|++.++++|++|++++.|..+ ...+|.++|||++|+|+.+|++++.|++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 81 (342)
T cd08266 2 KAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKP 81 (342)
T ss_pred eEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCCC
Confidence 455443 2345677778888889999999999999999999999887653 2345778999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382 88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT 167 (357)
Q Consensus 88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t 167 (357)
||+|++.+.. .||.|.+|..+.++.|++..+ .|....|++++|+.++.+.++++|+++++++++++++.+.+
T Consensus 82 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~ 153 (342)
T cd08266 82 GQRVVIYPGI-SCGRCEYCLAGRENLCAQYGI-------LGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLT 153 (342)
T ss_pred CCEEEEcccc-ccccchhhccccccccccccc-------cccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHH
Confidence 9999766444 599999999999999997533 23346799999999999999999999999999999999999
Q ss_pred hhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---h-
Q 018382 168 VFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---A- 242 (357)
Q Consensus 168 a~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~- 242 (357)
||.++.....+.++++++|+|+ +.+|++++++++..|++|+++++++++.+.+.+ ++.+.+++..+.+....+ .
T Consensus 154 a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (342)
T cd08266 154 AWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LGADYVIDYRKEDFVREVRELTG 232 (342)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCeEEecCChHHHHHHHHHhC
Confidence 9999877777789999999987 799999999999999999999999888888866 888888876654433332 2
Q ss_pred -CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382 243 -DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320 (357)
Q Consensus 243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~ 320 (357)
.++|++++++|.. .+...+++++++|+++.++..... ..+.....+.++.++.+........+..+++++.++.+.+
T Consensus 233 ~~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 311 (342)
T cd08266 233 KRGVDVVVEHVGAA-TWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKP 311 (342)
T ss_pred CCCCcEEEECCcHH-HHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCccc
Confidence 2799999999987 788999999999999999866442 2334434567888999988877888999999999999887
Q ss_pred cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 321 MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 321 ~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
.+ +.|+++++++|++.+.+++..||+++++
T Consensus 312 ~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 312 VIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 66 8999999999999999888889999863
No 74
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=7.8e-39 Score=296.28 Aligned_cols=325 Identities=24% Similarity=0.363 Sum_probs=263.8
Q ss_pred CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHh-cCCC--CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEc
Q 018382 18 PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIK-NDLG--MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94 (357)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~-g~~~--~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~ 94 (357)
+.+.+.+++.++|+++++||+||+.++++|++|+..+. +..+ ...+|.++|+|++|+|+++|+++++|++||+|++.
T Consensus 5 ~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~ 84 (339)
T cd08232 5 AAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVN 84 (339)
T ss_pred cCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEc
Confidence 46788999999999999999999999999999998774 3221 12356789999999999999999999999999665
Q ss_pred cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhc
Q 018382 95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH 174 (357)
Q Consensus 95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~ 174 (357)
..+.|+.|.+|..|+.+.|....+.....+ + ...+|+|++|++++.+.++++|+++++++|+. ..++++||+++..
T Consensus 85 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~-~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~ 160 (339)
T cd08232 85 -PSRPCGTCDYCRAGRPNLCLNMRFLGSAMR-F-PHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNR 160 (339)
T ss_pred -cCCcCCCChHHhCcCcccCccccceeeccc-c-CCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHh
Confidence 444699999999999999997543211000 0 12479999999999999999999999999875 5788899999988
Q ss_pred cCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh---CCccEEEE
Q 018382 175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA---DSLDYIID 250 (357)
Q Consensus 175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~---~~~d~v~d 250 (357)
...+ ++++|||.|+|.+|++++|+|+..|+ +|+++++++++.+.+++ +|++++++.++.. +.... .++|++||
T Consensus 161 ~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~-~g~~~vi~~~~~~-~~~~~~~~~~vd~vld 237 (339)
T cd08232 161 AGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARA-MGADETVNLARDP-LAAYAADKGDFDVVFE 237 (339)
T ss_pred cCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-cCCCEEEcCCchh-hhhhhccCCCccEEEE
Confidence 8885 99999999889999999999999999 89999888888776666 9999999877644 22222 36999999
Q ss_pred cCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc--cE-EEeec
Q 018382 251 TVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--MI-EVIKM 327 (357)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~i-~~~~~ 327 (357)
+.+....+...+++|+++|+++.++............++.++.++.+.... .+.++.++++++++.+++ .+ ++|++
T Consensus 238 ~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 316 (339)
T cd08232 238 ASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRF-DDEFAEAVRLLAAGRIDVRPLITAVFPL 316 (339)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecC-HHHHHHHHHHHHcCCCCchhheeEEecH
Confidence 998644688899999999999999865433333444455677788777643 456888999999998864 35 89999
Q ss_pred ccHHHHHHHHHcCCccEEEEEec
Q 018382 328 DYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 328 ~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
+++++|++.+.+++..||+++++
T Consensus 317 ~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 317 EEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHHhCCCceeEEEeC
Confidence 99999999999888889999863
No 75
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=2e-39 Score=298.45 Aligned_cols=288 Identities=20% Similarity=0.215 Sum_probs=237.4
Q ss_pred cCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018382 16 KDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGV 95 (357)
Q Consensus 16 ~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 95 (357)
..++..+++.+++.|+|++|||||||.++++|+.+. .|..+....|.++|.|++|+|+++|+ .|++||||+..
T Consensus 13 ~~~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~- 85 (325)
T TIGR02825 13 YPTDSDFELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS- 85 (325)
T ss_pred CCCCCceEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-
Confidence 334567888899999999999999999999999654 34333334567999999999999874 59999999632
Q ss_pred ccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEEC----CCCCCcccc-ccccchhhhhhh
Q 018382 96 LVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI----PDGMALEQA-APLLCAGVTVFS 170 (357)
Q Consensus 96 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~l----P~~l~~~~a-a~~~~~~~ta~~ 170 (357)
++|++|++++.+.+.++ |++++++++ +++++++.|||+
T Consensus 86 -------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~ 128 (325)
T TIGR02825 86 -------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYF 128 (325)
T ss_pred -------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHH
Confidence 36899999999988887 999999997 689999999999
Q ss_pred hhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-hH---HHHhh-CC
Q 018382 171 PLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-TR---MQEAA-DS 244 (357)
Q Consensus 171 ~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~---~~~~~-~~ 244 (357)
++.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|+++++++++. .. ++... ++
T Consensus 129 ~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~-lGa~~vi~~~~~~~~~~~~~~~~~~g 207 (325)
T TIGR02825 129 GLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK-LGFDVAFNYKTVKSLEETLKKASPDG 207 (325)
T ss_pred HHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEeccccccHHHHHHHhCCCC
Confidence 9877777799999999986 999999999999999999999999999988877 999999988763 22 22333 37
Q ss_pred ccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-----Ccc--cchHHHhhccceEEEEeecC------HHHHHHHHH
Q 018382 245 LDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-----PMQ--FLTPMVMLGRKAITGSFIGS------MKETKEMLE 311 (357)
Q Consensus 245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~ 311 (357)
+|++||++|+. .+..++++++++|+++.+|.... ... .....++.+.+++.++.... .+.++++++
T Consensus 208 vdvv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T TIGR02825 208 YDCYFDNVGGE-FSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLK 286 (325)
T ss_pred eEEEEECCCHH-HHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHH
Confidence 99999999987 78999999999999999986432 111 12334566788888876432 246788999
Q ss_pred HHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 312 FCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 312 ~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
++.++.+++.+ .+|+++++.+|++.+++++..||+|+.
T Consensus 287 l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 287 WVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 99999999876 889999999999999999999999873
No 76
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=4.7e-39 Score=298.44 Aligned_cols=293 Identities=16% Similarity=0.160 Sum_probs=229.0
Q ss_pred CCcceeeeecCCCC-CCcEEEEEeeeccccchHHHHhcCC---CCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018382 20 GILSPYTYTLRNTG-AEDVYIKVLYCGICHTDIHQIKNDL---GMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGV 95 (357)
Q Consensus 20 ~~~~~~~~~~p~~~-~~evlV~v~~~~~~~~D~~~~~g~~---~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 95 (357)
+.+++.+++.|+|. ++||||||+++++||.|+....... ....+|.++|+|++|+|+++|+++++|++||+|+..
T Consensus 21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~- 99 (345)
T cd08293 21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF- 99 (345)
T ss_pred cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec-
Confidence 45778899999874 9999999999999999964332111 113467789999999999999999999999999632
Q ss_pred ccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccc----cccccchhhhhhhh
Q 018382 96 LVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQ----AAPLLCAGVTVFSP 171 (357)
Q Consensus 96 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~----aa~~~~~~~ta~~~ 171 (357)
.++|+||++++++.++++|+++++++ +++++.++.|||++
T Consensus 100 ------------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~a 143 (345)
T cd08293 100 ------------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIG 143 (345)
T ss_pred ------------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHH
Confidence 15699999999999999999865433 45678889999999
Q ss_pred hhccCCCCCC--CeEEEEec-ChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh-C
Q 018382 172 LSHFGLKQSG--LRGGILGL-GGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA-D 243 (357)
Q Consensus 172 l~~~~~~~~~--~~VlI~G~-g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~-~ 243 (357)
+.....++++ ++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.+++++|+++++++++.+..+ ++. +
T Consensus 144 l~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~ 223 (345)
T cd08293 144 IQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPE 223 (345)
T ss_pred HHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCC
Confidence 9777766776 99999987 9999999999999999 8999999999888887779999999887654433 333 3
Q ss_pred CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC---cc----cch--HHH-hhccceEEEEeecC-----HHHHHH
Q 018382 244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP---MQ----FLT--PMV-MLGRKAITGSFIGS-----MKETKE 308 (357)
Q Consensus 244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~----~~~--~~~-~~~~~~i~g~~~~~-----~~~~~~ 308 (357)
++|++||++|+. .+..++++++++|+++.+|..... .. +.. ..+ ..+..+........ .+.+++
T Consensus 224 gvd~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (345)
T cd08293 224 GVDVYFDNVGGE-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQ 302 (345)
T ss_pred CceEEEECCCcH-HHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHH
Confidence 799999999987 688999999999999999853211 11 110 111 12333332222111 134677
Q ss_pred HHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 309 MLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 309 ~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
++++++++.+++.+ ..++++++++|++.+++++..||+++++
T Consensus 303 ~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 303 LSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 88899999998766 6679999999999999999899999874
No 77
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.2e-39 Score=298.19 Aligned_cols=311 Identities=21% Similarity=0.297 Sum_probs=253.5
Q ss_pred CCcceee-eecCCCCCCcEEEEEeeeccccchHHHHhcCCC--------------------CCCCCCccCccccEEEEEe
Q 018382 20 GILSPYT-YTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG--------------------MSNYPMVPGHEVVGEVKEV 78 (357)
Q Consensus 20 ~~~~~~~-~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~--------------------~~~~p~~lG~e~~G~V~~v 78 (357)
..+.+.+ .+.|+|.+++|+||+.++++|++|++++.|.++ ...+|.++|||++|+|+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~v 92 (350)
T cd08274 13 DKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAV 92 (350)
T ss_pred cceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEEe
Confidence 3455543 577888999999999999999999998877543 2346789999999999999
Q ss_pred CCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccc
Q 018382 79 GSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQA 158 (357)
Q Consensus 79 G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~a 158 (357)
|+++++|++||+|++.+.. .|+.|..|.. |.. .|...+|++++|+.++...++++|++++++++
T Consensus 93 G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~-----~~~----------~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~ 156 (350)
T cd08274 93 GEGVDTARIGERVLVDPSI-RDPPEDDPAD-----IDY----------IGSERDGGFAEYTVVPAENAYPVNSPLSDVEL 156 (350)
T ss_pred CCCCCCCCCCCEEEEecCc-CCCCcccccc-----ccc----------cCCCCCccceEEEEecHHHceeCCCCCCHHHH
Confidence 9999999999999765433 4666655421 110 12224699999999999999999999999999
Q ss_pred ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382 159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR 237 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~ 237 (357)
+++++.+.|||.++. ...++++++|||+|+ |++|++++++|+..|++|+++++++ +.+.+++ +|++.+++......
T Consensus 157 a~l~~~~~ta~~~~~-~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~-~g~~~~~~~~~~~~ 233 (350)
T cd08274 157 ATFPCSYSTAENMLE-RAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRA-LGADTVILRDAPLL 233 (350)
T ss_pred HhcccHHHHHHHHHh-hcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHh-cCCeEEEeCCCccH
Confidence 999999999999984 455699999999997 9999999999999999999988765 7777765 99876665543322
Q ss_pred HH-Hhh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHH
Q 018382 238 MQ-EAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFC 313 (357)
Q Consensus 238 ~~-~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 313 (357)
.+ ... .++|++||++++. .+..++++++++|+++.+|..... ..++...++.++.++.++.....+.+.++++++
T Consensus 234 ~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (350)
T cd08274 234 ADAKALGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRYI 312 (350)
T ss_pred HHHHhhCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCHHHHHHHHHHH
Confidence 11 122 3799999999987 889999999999999999865443 345666667889999999888788899999999
Q ss_pred HhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 314 REKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 314 ~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
.++.+++.+ ++|+++++++|++.+.+++..||+++++
T Consensus 313 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 313 EEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred HCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 999998766 8999999999999999988889999863
No 78
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=6.3e-39 Score=301.43 Aligned_cols=317 Identities=23% Similarity=0.375 Sum_probs=256.7
Q ss_pred CcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC------C-CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEE
Q 018382 21 ILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL------G-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGV 93 (357)
Q Consensus 21 ~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~------~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~ 93 (357)
.+++++++.|+++++||+||+.++++|++|++.+.+.. + ...+|.++|||++|+|+++|++++.|++||+|++
T Consensus 38 ~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 117 (384)
T cd08265 38 ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA 117 (384)
T ss_pred CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence 58889999999999999999999999999999886321 1 1345789999999999999999999999999977
Q ss_pred ccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCC-------Cccccccccchhh
Q 018382 94 GVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGM-------ALEQAAPLLCAGV 166 (357)
Q Consensus 94 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l-------~~~~aa~~~~~~~ 166 (357)
.+.. .|+.|..|..+.++.|..+... |...+|+|++|+.++++.++++|+++ +.+ +++++.+++
T Consensus 118 ~~~~-~~~~~~~c~~~~~~~~~~~~~~-------g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ 188 (384)
T cd08265 118 EEMM-WCGMCRACRSGSPNHCKNLKEL-------GFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTS 188 (384)
T ss_pred CCCC-CCCCChhhhCcCcccCCCccee-------eecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHH
Confidence 6654 6999999999999999864422 22347999999999999999999864 444 666778889
Q ss_pred hhhhhhhcc-CCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCCh---hH---H
Q 018382 167 TVFSPLSHF-GLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDA---TR---M 238 (357)
Q Consensus 167 ta~~~l~~~-~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~---~~---~ 238 (357)
+||+++... ..+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+++ +|++++++.++. ++ +
T Consensus 189 ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~~~~v 267 (384)
T cd08265 189 VAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKE-MGADYVFNPTKMRDCLSGEKV 267 (384)
T ss_pred HHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCCEEEcccccccccHHHHH
Confidence 999998654 567999999999889999999999999999 79999888887766666 999999887632 22 2
Q ss_pred HHhhC--CccEEEEcCCCC-CChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeec-CHHHHHHHHHHHH
Q 018382 239 QEAAD--SLDYIIDTVPAN-HPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIG-SMKETKEMLEFCR 314 (357)
Q Consensus 239 ~~~~~--~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~~~~ 314 (357)
.++.. ++|+|+|+.|.. ..+..++++++++|+++.+|.......+....+..+..++.+.... ....+.++++++.
T Consensus 268 ~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~ 347 (384)
T cd08265 268 MEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMA 347 (384)
T ss_pred HHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHH
Confidence 33332 799999999863 2567889999999999999865444444445566677788887643 2346889999999
Q ss_pred hcCCCcc--E-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382 315 EKGVTSM--I-EVIKMDYVNKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 315 ~~~l~~~--i-~~~~~~~~~~a~~~~~~~~~~Gkvvi 348 (357)
++.+++. + ++|+++++++|++.++++ ..||+++
T Consensus 348 ~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 348 SGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred cCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 9999862 4 899999999999997665 5688875
No 79
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=8.8e-39 Score=296.39 Aligned_cols=325 Identities=25% Similarity=0.408 Sum_probs=267.8
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
|++++... .+.+.+++.++|+++++||+||+.++++|++|+..+.+.+. ...|.++|+|++|+|+.+|++++.|++||
T Consensus 1 ~~a~~~~~-~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTG-PGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEec-CCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 35666653 35688899999999999999999999999999998877652 34567899999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF 169 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~ 169 (357)
+|+..+.. .|+.|..|..++++.|+...+. |....|+|++|+.++.+.++++|+++++++++++ ..+++||
T Consensus 79 ~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~ 149 (343)
T cd08236 79 RVAVNPLL-PCGKCEYCKKGEYSLCSNYDYI-------GSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVAL 149 (343)
T ss_pred EEEEcCCC-CCCCChhHHCcChhhCCCcceE-------ecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHH
Confidence 99776555 5899999999999999875432 3346799999999999999999999999999887 5778999
Q ss_pred hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hhC--
Q 018382 170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AAD-- 243 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~~-- 243 (357)
.++. ...++++++|+|+|+|.+|.+++|+|+..|++ |+++++++++.+.+.+ +|++++++.++.. .++ ...
T Consensus 150 ~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~-~g~~~~~~~~~~~-~~~~~~~~~~~ 226 (343)
T cd08236 150 HAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARE-LGADDTINPKEED-VEKVRELTEGR 226 (343)
T ss_pred HHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCCEEecCcccc-HHHHHHHhCCC
Confidence 9987 44568999999998899999999999999997 9999988888887766 9999998877644 333 222
Q ss_pred CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcc---cchHHHhhccceEEEEeecC-----HHHHHHHHHHHHh
Q 018382 244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ---FLTPMVMLGRKAITGSFIGS-----MKETKEMLEFCRE 315 (357)
Q Consensus 244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~ 315 (357)
++|++|||.|....+..++++|+++|+++.+|....... .....++.++.++.++.... .+.++++.+++.+
T Consensus 227 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (343)
T cd08236 227 GADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLAS 306 (343)
T ss_pred CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHc
Confidence 599999999875577889999999999999986544321 23334557788888877644 4678889999999
Q ss_pred cCCC--ccE-EEeecccHHHHHHHHHc-CCccEEEEE
Q 018382 316 KGVT--SMI-EVIKMDYVNKAFERLEK-NDVRYRFVV 348 (357)
Q Consensus 316 ~~l~--~~i-~~~~~~~~~~a~~~~~~-~~~~Gkvvi 348 (357)
+.+. +.+ +++++++++++++.+++ +...||+|+
T Consensus 307 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 307 GKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred CCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 9886 345 89999999999999998 667788874
No 80
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=4e-39 Score=296.90 Aligned_cols=296 Identities=21% Similarity=0.223 Sum_probs=240.0
Q ss_pred heeeehccC----CC--CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCC
Q 018382 9 ATIGWAAKD----PS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEV 82 (357)
Q Consensus 9 ~~~~~~~~~----~~--~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v 82 (357)
+|++|.... ++ ..+++++++.|+|+++|||||++++++||.|.+...+ ...+|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 567777654 22 4578889999999999999999999999987653221 124678999999999985 45
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc---ceEECCCCCC--c--
Q 018382 83 SNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK---FVVKIPDGMA--L-- 155 (357)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~---~~~~lP~~l~--~-- 155 (357)
++|++||||+. .+++++|++++.+ .++++|++++ +
T Consensus 76 ~~~~~Gd~V~~--------------------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~ 117 (329)
T cd08294 76 SKFPVGTIVVA--------------------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLPP 117 (329)
T ss_pred CCCCCCCEEEe--------------------------------------eCCeeeEEEECCccccceEECCccccccCCh
Confidence 67999999963 2468899999999 9999999998 2
Q ss_pred -cccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCC
Q 018382 156 -EQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSS 233 (357)
Q Consensus 156 -~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~ 233 (357)
..++++++.++|||+++.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++ +|++++++++
T Consensus 118 ~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~~vi~~~ 196 (329)
T cd08294 118 SLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFDAVFNYK 196 (329)
T ss_pred HHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEeCC
Confidence 2334688899999999987777799999999985 999999999999999999999999999988888 9999999988
Q ss_pred ChhHHHHh---h-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC--c-----ccchHHHhhccceEEEEeecC
Q 018382 234 DATRMQEA---A-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP--M-----QFLTPMVMLGRKAITGSFIGS 302 (357)
Q Consensus 234 ~~~~~~~~---~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~-----~~~~~~~~~~~~~i~g~~~~~ 302 (357)
+.+..+++ . +++|++||++|+. .+..++++++++|+++.+|..... . ......++.++.++.++....
T Consensus 197 ~~~~~~~v~~~~~~gvd~vld~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 275 (329)
T cd08294 197 TVSLEEALKEAAPDGIDCYFDNVGGE-FSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYR 275 (329)
T ss_pred CccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhh
Confidence 75544333 2 3799999999986 889999999999999998753211 0 112334567788888876543
Q ss_pred H-----HHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 303 M-----KETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 303 ~-----~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
. +.+++++++++++.+++.. .+|+++++++|++.+++++..||+++++
T Consensus 276 ~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 276 WQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred hHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 2 3367788999999998865 7899999999999999999999999874
No 81
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=2.6e-39 Score=291.29 Aligned_cols=262 Identities=24% Similarity=0.350 Sum_probs=217.2
Q ss_pred ccCccccEEEEEeCCCCC------CCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEE
Q 018382 66 VPGHEVVGEVKEVGSEVS------NFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESM 139 (357)
Q Consensus 66 ~lG~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 139 (357)
++|||++|+|+++|++|+ +|++||||++.+.. .||.|..|+.|.++.|+...+.+......+...+|+|+||+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~ 79 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTV-PCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHC 79 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeE
Confidence 589999999999999999 89999999776544 59999999999999998755432111111223579999999
Q ss_pred EeeCc-ceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHH
Q 018382 140 VVDQK-FVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKR 217 (357)
Q Consensus 140 ~v~~~-~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~ 217 (357)
+++++ .++++|+++++++++.+++.+.|||+++..... .++++|||+|+|++|++++|+|+..|++ |+++++++++.
T Consensus 80 ~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~-~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 80 HLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGD-LKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred EecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 99997 799999999999999999999999999987766 6999999999999999999999999996 88888888888
Q ss_pred HHHHHhcCCcEEEcCCCh-hHHHHhh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC--CCcccchHHHhhcc
Q 018382 218 VEAMEHLGADQYLVSSDA-TRMQEAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN--TPMQFLTPMVMLGR 292 (357)
Q Consensus 218 ~~~~~~~g~~~vv~~~~~-~~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~ 292 (357)
+.+++ +|++++++..+. +.+.++. .++|++||++|....+..++++++++|+++.+|... ....++...++.++
T Consensus 159 ~~a~~-~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~ 237 (280)
T TIGR03366 159 ELALS-FGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRW 237 (280)
T ss_pred HHHHH-cCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCC
Confidence 88777 999998886543 2233333 279999999998767889999999999999999753 23456777888999
Q ss_pred ceEEEEeecCHHHHHHHHHHHHhc--CCC--ccE-EEeecccH
Q 018382 293 KAITGSFIGSMKETKEMLEFCREK--GVT--SMI-EVIKMDYV 330 (357)
Q Consensus 293 ~~i~g~~~~~~~~~~~~~~~~~~~--~l~--~~i-~~~~~~~~ 330 (357)
+++.|+..++.++++++++++.++ .+. +.+ ++|+++|+
T Consensus 238 ~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 238 LTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred cEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 999999988888999999999985 443 356 88999873
No 82
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.3e-38 Score=291.54 Aligned_cols=328 Identities=22% Similarity=0.295 Sum_probs=259.9
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC---CCCCCCCccCccccEEEEEeCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL---GMSNYPMVPGHEVVGEVKEVGSEVSNFK 86 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~---~~~~~p~~lG~e~~G~V~~vG~~v~~~~ 86 (357)
|++|+....++.+++.+.+.|.|.++|++||+.++++|+.|+.++.+.. +....|.++|+|++|+|+.+|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 3566665445578899999999999999999999999999998865431 1233566899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382 87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV 166 (357)
Q Consensus 87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ 166 (357)
+||+|+..+.. .||.|..|..+.++.|+.. ++++ ....|+|++|++++.+.++++|++++.+. ++++..+.
T Consensus 81 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~g~~~~~v~v~~~~~~~lP~~~~~~~-a~~~~~~~ 151 (341)
T cd05281 81 VGDYVSAETHI-VCGKCYQCRTGNYHVCQNT--KILG-----VDTDGCFAEYVVVPEENLWKNDKDIPPEI-ASIQEPLG 151 (341)
T ss_pred CCCEEEECCcc-CCCCChHHHCcCcccCccc--ceEe-----ccCCCcceEEEEechHHcEECcCCCCHHH-hhhhhHHH
Confidence 99999776544 6999999999999999742 3332 23579999999999999999999999854 46777778
Q ss_pred hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH--HHHhh-
Q 018382 167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATR--MQEAA- 242 (357)
Q Consensus 167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~--~~~~~- 242 (357)
++++++. . ..+++++|||.|+|.+|++++|+|+..|+ +|+++++++++.+.+++ +|++++++.+..+. +.+..
T Consensus 152 ~a~~~~~-~-~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 228 (341)
T cd05281 152 NAVHTVL-A-GDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKK-MGADVVINPREEDVVEVKSVTD 228 (341)
T ss_pred HHHHHHH-h-cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCcceeeCcccccHHHHHHHcC
Confidence 8888765 2 33789999998889999999999999999 78888777777776666 99998887665433 22222
Q ss_pred -CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchH-HHhhccceEEEEeecC-HHHHHHHHHHHHhcCCC
Q 018382 243 -DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTP-MVMLGRKAITGSFIGS-MKETKEMLEFCREKGVT 319 (357)
Q Consensus 243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~g~~~~~-~~~~~~~~~~~~~~~l~ 319 (357)
+++|++||++|.......++++++++|+++.++.......+... ....++.++.+..... .+.+..+++++.++.+.
T Consensus 229 ~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 308 (341)
T cd05281 229 GTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVD 308 (341)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCC
Confidence 27999999998765778899999999999999865443333322 3556777777665322 35678899999999886
Q ss_pred c--cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 320 S--MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 320 ~--~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
+ .+ +.++++++++||+.+++++ .||++++.
T Consensus 309 ~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 309 LSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred hhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 3 45 8899999999999999998 89999763
No 83
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=3.1e-37 Score=284.93 Aligned_cols=324 Identities=27% Similarity=0.399 Sum_probs=266.4
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
|+++++. +++.+.+.+++.|+++++||+||++++++|+.|+....|..+. .+|.++|+|++|+|+++|+++++|++||
T Consensus 1 ~~a~~~~-~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYE-GPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEec-CCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 4566665 3457888999999999999999999999999999998887653 3678999999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF 169 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~ 169 (357)
+|++.+... |++|..|..++++.|...... |....|++++|+.++.+.++++|+++++.+++.+ ..+.+++
T Consensus 79 ~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~ 149 (334)
T cd08234 79 RVAVDPNIY-CGECFYCRRGRPNLCENLTAV-------GVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAV 149 (334)
T ss_pred EEEEcCCcC-CCCCccccCcChhhCCCccee-------ccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHH
Confidence 997755544 999999999999998865421 2235799999999999999999999999998766 7778899
Q ss_pred hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH--Hhh-CCc
Q 018382 170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ--EAA-DSL 245 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~--~~~-~~~ 245 (357)
+++ ....++++++|||+|+|.+|.+++++|+..|++ |+++++++++.+.+++ +|++++++....+... ... +++
T Consensus 150 ~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~v 227 (334)
T cd08234 150 HGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKK-LGATETVDPSREDPEAQKEDNPYGF 227 (334)
T ss_pred HHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCeEEecCCCCCHHHHHHhcCCCC
Confidence 888 555669999999998899999999999999997 8888888888888866 8988888776543322 112 379
Q ss_pred cEEEEcCCCCCChHHHHhccccCCeEEEEccCCC--CcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc-c-
Q 018382 246 DYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT--PMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS-M- 321 (357)
Q Consensus 246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~-~- 321 (357)
|++||+++........+++++++|+++.+|.... ...+....++.++.++.+... ..+.++.+++++.++.+.+ .
T Consensus 228 d~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~ 306 (334)
T cd08234 228 DVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFI-NPYTFPRAIALLESGKIDVKGL 306 (334)
T ss_pred cEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEecc-CHHHHHHHHHHHHcCCCChhhh
Confidence 9999999865477889999999999999986543 233444445557788887765 3467888999999999875 2
Q ss_pred E-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382 322 I-EVIKMDYVNKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 322 i-~~~~~~~~~~a~~~~~~~~~~Gkvvi 348 (357)
+ ++|+++++++|++.+++ +..||+++
T Consensus 307 ~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 307 VSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred EEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 4 88999999999999998 77899886
No 84
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=9.7e-38 Score=288.53 Aligned_cols=297 Identities=19% Similarity=0.254 Sum_probs=240.6
Q ss_pred CCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccc
Q 018382 17 DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVL 96 (357)
Q Consensus 17 ~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 96 (357)
++++.++..++|.|+|+++||+||++++++|++|+.++.|..+...+|.++|+|++|+|+++|+++++|++||+|+...
T Consensus 12 ~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~- 90 (336)
T TIGR02817 12 TDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAG- 90 (336)
T ss_pred CCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcC-
Confidence 3456788889999999999999999999999999999888765555678999999999999999999999999996431
Q ss_pred cCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccC
Q 018382 97 VGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG 176 (357)
Q Consensus 97 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~ 176 (357)
+....|+|++|++++++.++++|+++++++++.+++.+.|||+++....
T Consensus 91 -------------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~ 139 (336)
T TIGR02817 91 -------------------------------DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRL 139 (336)
T ss_pred -------------------------------CCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhc
Confidence 0124699999999999999999999999999999999999999987766
Q ss_pred CCCC-----CCeEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh--hHHHHhh-CCcc
Q 018382 177 LKQS-----GLRGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSDA--TRMQEAA-DSLD 246 (357)
Q Consensus 177 ~~~~-----~~~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~~~-~~~d 246 (357)
.+++ +++|||+|+ |++|++++|+|+.. |++|+++++++++.+.+++ +|+++++++... ..+.+.. +++|
T Consensus 140 ~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~~~~vd 218 (336)
T TIGR02817 140 GINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLE-LGAHHVIDHSKPLKAQLEKLGLEAVS 218 (336)
T ss_pred CCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHH-cCCCEEEECCCCHHHHHHHhcCCCCC
Confidence 6666 999999986 99999999999998 9999999999988888876 999999875441 2233333 3799
Q ss_pred EEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeec------C------HHHHHHHHHHHH
Q 018382 247 YIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIG------S------MKETKEMLEFCR 314 (357)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~------~------~~~~~~~~~~~~ 314 (357)
+++|++++.......+++++++|+++.++.. ..++...+..++.++.+.... . ...++++++++.
T Consensus 219 ~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 295 (336)
T TIGR02817 219 YVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVD 295 (336)
T ss_pred EEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHH
Confidence 9999986644788999999999999987432 223333334444555543221 0 134688899999
Q ss_pred hcCCCccE-EEee---cccHHHHHHHHHcCCccEEEEEe
Q 018382 315 EKGVTSMI-EVIK---MDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 315 ~~~l~~~i-~~~~---~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
++.+++.+ +.|+ ++++++|++.+++++..||+++.
T Consensus 296 ~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 296 AGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred CCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 99998765 5554 68999999999999999998874
No 85
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=3.2e-37 Score=285.56 Aligned_cols=320 Identities=24% Similarity=0.308 Sum_probs=255.7
Q ss_pred CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC---CCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEc
Q 018382 18 PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL---GMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94 (357)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~---~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~ 94 (357)
++..++++++|.|.|.++||+||+.++++|++|+.++.+.. +...+|.++|+|++|+|+++|+++++|++||+|+..
T Consensus 7 ~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 86 (340)
T TIGR00692 7 PGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVE 86 (340)
T ss_pred CCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEEC
Confidence 44568889999999999999999999999999998875531 122346689999999999999999999999999665
Q ss_pred cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhc
Q 018382 95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH 174 (357)
Q Consensus 95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~ 174 (357)
++ ..|++|..|..+....|++..+. +....|++++|++++++.++++|++++++.+ +++..+.+|++++.
T Consensus 87 ~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~~- 156 (340)
T TIGR00692 87 TH-IVCGKCYACRRGQYHVCQNTKIF-------GVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTVL- 156 (340)
T ss_pred Cc-CCCCCChhhhCcChhhCcCcceE-------eecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHHH-
Confidence 44 46999999999999999986432 2235799999999999999999999998654 57788888888762
Q ss_pred cCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh--CCccEE
Q 018382 175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA--DSLDYI 248 (357)
Q Consensus 175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~--~~~d~v 248 (357)
...+++++|+|.|+|++|.+++|+++..|++ |+++.+++.+.+.+++ +|++++++....+..+ ++. +++|++
T Consensus 157 -~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~l~~~~~~~~~d~v 234 (340)
T TIGR00692 157 -AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKK-MGATYVVNPFKEDVVKEVADLTDGEGVDVF 234 (340)
T ss_pred -ccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCcEEEcccccCHHHHHHHhcCCCCCCEE
Confidence 3347899999988899999999999999996 8888677667666666 9998888876544333 332 379999
Q ss_pred EEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchH-HHhhccceEEEEeec-CHHHHHHHHHHHHhcCCC--ccE-E
Q 018382 249 IDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTP-MVMLGRKAITGSFIG-SMKETKEMLEFCREKGVT--SMI-E 323 (357)
Q Consensus 249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~g~~~~-~~~~~~~~~~~~~~~~l~--~~i-~ 323 (357)
||+.+....+...+++++++|+++.+|.......++.. .++.++.++.+.... ..+.+.++++++.++.++ +.+ +
T Consensus 235 ld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 314 (340)
T TIGR00692 235 LEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITH 314 (340)
T ss_pred EECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheee
Confidence 99988755788899999999999999875433333333 456677777765532 235578889999999987 445 8
Q ss_pred EeecccHHHHHHHHHcCCccEEEEEec
Q 018382 324 VIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 324 ~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
.+++++++++++.+++++. ||+++++
T Consensus 315 ~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 315 KFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred eeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 9999999999999998875 9999864
No 86
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1e-37 Score=284.34 Aligned_cols=293 Identities=26% Similarity=0.341 Sum_probs=230.8
Q ss_pred cceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCC----CCCCccCccccEE---EEEeC-CCCCCCCCCCEEEE
Q 018382 22 LSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMS----NYPMVPGHEVVGE---VKEVG-SEVSNFKVGDKVGV 93 (357)
Q Consensus 22 ~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~----~~p~~lG~e~~G~---V~~vG-~~v~~~~~Gd~V~~ 93 (357)
...++.++|.|+++|++|++.++++||.|+.+..|.++.. .+|.+++.++.|+ +...| ..+..+..||.+..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 4456899999999999999999999999999999988733 3564444444444 34444 22334555665532
Q ss_pred ccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhh
Q 018382 94 GVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLS 173 (357)
Q Consensus 94 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~ 173 (357)
....|+|+||++++...++++|+++++++||++|.++.|||.+|.
T Consensus 100 -----------------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~ 144 (347)
T KOG1198|consen 100 -----------------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALF 144 (347)
T ss_pred -----------------------------------ccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHH
Confidence 347899999999999999999999999999999999999999999
Q ss_pred ccC------CCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC---
Q 018382 174 HFG------LKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD--- 243 (357)
Q Consensus 174 ~~~------~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~--- 243 (357)
... .+++|++|||+|+ |++|++++|+|++.++..+++++++++.+++++ +|+++++|+++++.++++..
T Consensus 145 ~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~-lGAd~vvdy~~~~~~e~~kk~~~ 223 (347)
T KOG1198|consen 145 QLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK-LGADEVVDYKDENVVELIKKYTG 223 (347)
T ss_pred hccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH-cCCcEeecCCCHHHHHHHHhhcC
Confidence 999 8899999999976 999999999999999767777778888888888 99999999999888777765
Q ss_pred -CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC---Ccccc-----hH-----HH-hhccceEEEEeecCHHHHHH
Q 018382 244 -SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT---PMQFL-----TP-----MV-MLGRKAITGSFIGSMKETKE 308 (357)
Q Consensus 244 -~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~~-----~~-----~~-~~~~~~i~g~~~~~~~~~~~ 308 (357)
+||+||||+|+. .......++...|+...++...+ ..... .. .. ..+.....+......+.++.
T Consensus 224 ~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 302 (347)
T KOG1198|consen 224 KGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKA 302 (347)
T ss_pred CCccEEEECCCCC-ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHH
Confidence 799999999997 67777788888776444433221 11111 00 00 11111123333345578899
Q ss_pred HHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecC
Q 018382 309 MLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVA 351 (357)
Q Consensus 309 ~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~ 351 (357)
+.++++++++++.+ +.||++++.+|++.+.++...||+++.+.
T Consensus 303 l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 303 LVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred HHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 99999999999998 99999999999999999999999999874
No 87
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=1.8e-37 Score=287.29 Aligned_cols=305 Identities=23% Similarity=0.284 Sum_probs=251.6
Q ss_pred eeeehccCCCCC---cceeeeecCCCCC-CcEEEEEeeeccccchHHHHhcCCCCC-C----CCCccCccccEEEEEeCC
Q 018382 10 TIGWAAKDPSGI---LSPYTYTLRNTGA-EDVYIKVLYCGICHTDIHQIKNDLGMS-N----YPMVPGHEVVGEVKEVGS 80 (357)
Q Consensus 10 ~~~~~~~~~~~~---~~~~~~~~p~~~~-~evlV~v~~~~~~~~D~~~~~g~~~~~-~----~p~~lG~e~~G~V~~vG~ 80 (357)
|++|.+...+.+ +.++++|.|+|.+ +||+||+.++++|++|+..+.|..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 456666544333 7888999999988 999999999999999999988876421 2 567899999999999999
Q ss_pred CCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccccc
Q 018382 81 EVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAP 160 (357)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~ 160 (357)
++..|++||+|++.. ...|+|++|+.++.+.++++|++++++++++
T Consensus 81 ~v~~~~~Gd~V~~~~----------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~ 126 (341)
T cd08290 81 GVKSLKPGDWVIPLR----------------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAAT 126 (341)
T ss_pred CCCCCCCCCEEEecC----------------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHH
Confidence 999999999996531 1359999999999999999999999999999
Q ss_pred ccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc----HHHHHHHHhcCCcEEEcCCCh
Q 018382 161 LLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD----KKRVEAMEHLGADQYLVSSDA 235 (357)
Q Consensus 161 ~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~----~~~~~~~~~~g~~~vv~~~~~ 235 (357)
+++.+.|||+++.....++++++|||+|+ |++|++++|+|+..|++|+++++++ ++.+.+.+ +|++++++.+..
T Consensus 127 ~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 205 (341)
T cd08290 127 LSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKA-LGADHVLTEEEL 205 (341)
T ss_pred hhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHh-cCCCEEEeCccc
Confidence 99999999999987777799999999986 9999999999999999999998876 56777766 999999887653
Q ss_pred ---hHHHH---hhC-CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecCH----
Q 018382 236 ---TRMQE---AAD-SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGSM---- 303 (357)
Q Consensus 236 ---~~~~~---~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~---- 303 (357)
+.... ... ++|++|||+|+. .....+++++++|+++.++.... ...++....+.++.++.+......
T Consensus 206 ~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (341)
T cd08290 206 RSLLATELLKSAPGGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRA 284 (341)
T ss_pred ccccHHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhc
Confidence 33232 222 699999999987 67788999999999999985432 233444455678889888876432
Q ss_pred ------HHHHHHHHHHHhcCCCccE-EEe---ecccHHHHHHHHHcCCccEEEEEec
Q 018382 304 ------KETKEMLEFCREKGVTSMI-EVI---KMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 304 ------~~~~~~~~~~~~~~l~~~i-~~~---~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
..+..+++++.++.+.+.. ++| +++++++|++.+++++..||+++.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 285 NPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred CHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 2477888899999998755 778 9999999999999999999999864
No 88
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=3.1e-37 Score=281.40 Aligned_cols=296 Identities=25% Similarity=0.389 Sum_probs=245.9
Q ss_pred eeehccCCC-CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 11 IGWAAKDPS-GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 11 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
++|+..+++ ..+++++++.|++.++||+||+.++++|++|++...|.......|.++|+|++|+|+++|++++.|++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 81 (306)
T cd08258 2 KALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGD 81 (306)
T ss_pred eeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCCC
Confidence 466655433 5688999999999999999999999999999998888754334577899999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF 169 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~ 169 (357)
+|++......||.|..|..+..+.|+... +. |....|+|++|++++.+.++++|+++++++++ ++..+.+||
T Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~ 153 (306)
T cd08258 82 RVVSETTFSTCGRCPYCRRGDYNLCPHRK--GI-----GTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAV 153 (306)
T ss_pred EEEEccCcCCCCCCcchhCcCcccCCCCc--ee-----eecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHH
Confidence 99888777889999999999999998631 11 23467999999999999999999999999887 777889999
Q ss_pred hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEe-C-CcHHHHHHHHhcCCcEEEcCCChhHHHHh---h--
Q 018382 170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVIS-S-SDKKRVEAMEHLGADQYLVSSDATRMQEA---A-- 242 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~-~-~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~-- 242 (357)
+++.....++++++|||.|+|.+|.+++|+|+..|++|+++. . ++++.+.+.+ +|++++ +.+..+....+ .
T Consensus 154 ~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~l~~~~~~ 231 (306)
T cd08258 154 HAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKE-LGADAV-NGGEEDLAELVNEITDG 231 (306)
T ss_pred HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHH-hCCccc-CCCcCCHHHHHHHHcCC
Confidence 998887788999999998889999999999999999988773 2 3335555555 999888 76654443332 2
Q ss_pred CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhc
Q 018382 243 DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREK 316 (357)
Q Consensus 243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 316 (357)
.++|++||+.|....+...+++++++|+++.+|.... ...++...++.+++++.|+++++.++++++++++++|
T Consensus 232 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 232 DGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG 306 (306)
T ss_pred CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence 3799999999865578889999999999999988652 3445666677899999999999999999999999875
No 89
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=2e-36 Score=278.28 Aligned_cols=304 Identities=21% Similarity=0.228 Sum_probs=248.8
Q ss_pred eeehcc--CCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCC
Q 018382 11 IGWAAK--DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNF 85 (357)
Q Consensus 11 ~~~~~~--~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~ 85 (357)
+++.+. +.+..+.+.+.+.|.+.++||+|++.++++|++|++...|..+ ...+|.++|+|++|+|+++|++++.+
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~ 81 (324)
T cd08244 2 RAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPA 81 (324)
T ss_pred eEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCC
Confidence 444443 2334566667777788999999999999999999998887643 23456789999999999999999999
Q ss_pred CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchh
Q 018382 86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAG 165 (357)
Q Consensus 86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~ 165 (357)
++||+|++... ...|+|++|+.++.++++++|+++++++++.+++.+
T Consensus 82 ~~Gd~V~~~~~---------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~ 128 (324)
T cd08244 82 WLGRRVVAHTG---------------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDG 128 (324)
T ss_pred CCCCEEEEccC---------------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchH
Confidence 99999975310 137899999999999999999999999999999999
Q ss_pred hhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---
Q 018382 166 VTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA--- 241 (357)
Q Consensus 166 ~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~--- 241 (357)
.|||. +.....++++++|+|+|+ |.+|++++++|+..|++|+++++++++.+.+.+ +|++++++.++.+..+.+
T Consensus 129 ~ta~~-~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 206 (324)
T cd08244 129 RTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRA-LGADVAVDYTRPDWPDQVREA 206 (324)
T ss_pred HHHHH-HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCEEEecCCccHHHHHHHH
Confidence 99965 444556699999999986 999999999999999999999999999888866 999988887765443333
Q ss_pred h--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecC------HHHHHHHHHH
Q 018382 242 A--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGS------MKETKEMLEF 312 (357)
Q Consensus 242 ~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~ 312 (357)
. .++|+++|++|+. ....++++++++|+++.+|..... ..++....+.++.++.+..... .+.+.+++++
T Consensus 207 ~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (324)
T cd08244 207 LGGGGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAE 285 (324)
T ss_pred cCCCCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHH
Confidence 2 2699999999987 678899999999999999875432 2334344567888888776543 2456778889
Q ss_pred HHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 313 CREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 313 ~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
+.++.+.+.+ +.|+++++++|++.+++++..||+++++
T Consensus 286 l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 286 AAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 9999988766 8999999999999999999999999864
No 90
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.5e-36 Score=276.54 Aligned_cols=325 Identities=24% Similarity=0.325 Sum_probs=266.4
Q ss_pred eeeehccC--CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382 10 TIGWAAKD--PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFK 86 (357)
Q Consensus 10 ~~~~~~~~--~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~ 86 (357)
|++|+... ....+++++.+.|.+.++|++|++.++++|++|++...|.++ ....|.++|||++|+|+++|+++.+|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 34555542 235677788888889999999999999999999999887654 234677899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382 87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV 166 (357)
Q Consensus 87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ 166 (357)
+||+|++..... | ..+.+..|... . .+|.+..|++++|+.++.+.++++|+++++.+++.+++.+.
T Consensus 81 ~Gd~V~~~~~~~-~------~~~~~~~~~~~--~-----~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ 146 (336)
T cd08276 81 VGDRVVPTFFPN-W------LDGPPTAEDEA--S-----ALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGL 146 (336)
T ss_pred CCCEEEEecccc-c------ccccccccccc--c-----ccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHH
Confidence 999997654332 2 33333444321 1 12344689999999999999999999999999999999999
Q ss_pred hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC-hhH---HHHhh
Q 018382 167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD-ATR---MQEAA 242 (357)
Q Consensus 167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~---~~~~~ 242 (357)
+||.++.....+++|++|+|+|+|++|++++++++..|++|+++++++++.+.+.+ +|.+++++.+. .+. +....
T Consensus 147 ~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~ 225 (336)
T cd08276 147 TAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERAKA-LGADHVINYRTTPDWGEEVLKLT 225 (336)
T ss_pred HHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEcCCcccCHHHHHHHHc
Confidence 99999988777799999999988999999999999999999999999999888887 89999888765 333 33333
Q ss_pred C--CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCC
Q 018382 243 D--SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVT 319 (357)
Q Consensus 243 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~ 319 (357)
. ++|+++|+++.. ....++++++++|+++.+|..... ........+.++.++.+......+.++++++++.++.+.
T Consensus 226 ~~~~~d~~i~~~~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 304 (336)
T cd08276 226 GGRGVDHVVEVGGPG-TLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIR 304 (336)
T ss_pred CCCCCcEEEECCChH-HHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcc
Confidence 3 799999999876 788999999999999999875543 234455667889999998877778899999999999887
Q ss_pred ccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 320 SMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 320 ~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
+.. +.|++++++++++.+.+++..||+++++
T Consensus 305 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 305 PVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred cccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 755 8999999999999999988889999864
No 91
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=4.3e-36 Score=276.12 Aligned_cols=306 Identities=24% Similarity=0.302 Sum_probs=241.5
Q ss_pred eeehccCC--CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCCCC
Q 018382 11 IGWAAKDP--SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKV 87 (357)
Q Consensus 11 ~~~~~~~~--~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (357)
+++++... +.+++++++|.|.+.++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++ +++.|++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~~ 79 (325)
T cd05280 2 KALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFRE 79 (325)
T ss_pred ceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCCC
Confidence 44444332 237889999999999999999999999999999998887542 235778999999999999 4568999
Q ss_pred CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382 88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT 167 (357)
Q Consensus 88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t 167 (357)
||+|++... ..|...+|++++|++++++.++++|+++++++++.+++.+.+
T Consensus 80 Gd~V~~~~~-----------------------------~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~t 130 (325)
T cd05280 80 GDEVLVTGY-----------------------------DLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFT 130 (325)
T ss_pred CCEEEEccc-----------------------------ccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHH
Confidence 999975320 012345799999999999999999999999999999999999
Q ss_pred hhhhhhccCCC--C-CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChh--HHHHh
Q 018382 168 VFSPLSHFGLK--Q-SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDAT--RMQEA 241 (357)
Q Consensus 168 a~~~l~~~~~~--~-~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~~ 241 (357)
||.++...... . .+++|+|+|+ |.+|++++|+|+..|++|+++++++++.+.+++ +|++++++.++.. ..+..
T Consensus 131 a~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 209 (325)
T cd05280 131 AALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKS-LGASEVLDREDLLDESKKPL 209 (325)
T ss_pred HHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEEEcchhHHHHHHHHh
Confidence 99998665432 4 3579999997 999999999999999999999999999888876 9999998876532 22222
Q ss_pred h-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCH------HHHHHHHHHH
Q 018382 242 A-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSM------KETKEMLEFC 313 (357)
Q Consensus 242 ~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~------~~~~~~~~~~ 313 (357)
. +++|++||++++. .+..++++++++|+++.+|..... ..+....++.++.++.+...... +.++.+.+++
T Consensus 210 ~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (325)
T cd05280 210 LKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEW 288 (325)
T ss_pred cCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHH
Confidence 2 3799999999987 899999999999999999875432 23344444568888888765321 2233444445
Q ss_pred HhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 314 REKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 314 ~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
..+ +.+++ ++|+++++++|++.+.+++..||+++++
T Consensus 289 ~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 289 KPD-LLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred hcC-CccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 555 33345 9999999999999999999999999864
No 92
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.5e-36 Score=274.32 Aligned_cols=294 Identities=23% Similarity=0.279 Sum_probs=245.4
Q ss_pred eeehccCC-CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 11 IGWAAKDP-SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 11 ~~~~~~~~-~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
++|++... +..+++++.+.|.+.++||+||+.++++|+.|+++..+. ..+.++|+|++|+|+++|++++.|++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 77 (305)
T cd08270 2 RALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVGA 77 (305)
T ss_pred eEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCCC
Confidence 45555422 456777789999999999999999999999999876522 2356899999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF 169 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~ 169 (357)
+|+.. ...|+|++|+.++.+.++++|+++++++++++++.+.+||
T Consensus 78 ~V~~~-----------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~ 122 (305)
T cd08270 78 RVVGL-----------------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTAL 122 (305)
T ss_pred EEEEe-----------------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHH
Confidence 99643 1368999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEE
Q 018382 170 SPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYI 248 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v 248 (357)
+++...... ++++|+|+|+ |++|++++++++..|++|+.+++++++.+.+++ +|++.+++... + ...+++|++
T Consensus 123 ~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~-~---~~~~~~d~v 196 (305)
T cd08270 123 RALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGAAEVVVGGS-E---LSGAPVDLV 196 (305)
T ss_pred HHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEeccc-c---ccCCCceEE
Confidence 999888874 6999999987 999999999999999999999999989888887 99876554322 1 112479999
Q ss_pred EEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhh--ccceEEEEeecC----HHHHHHHHHHHHhcCCCcc
Q 018382 249 IDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVML--GRKAITGSFIGS----MKETKEMLEFCREKGVTSM 321 (357)
Q Consensus 249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~--~~~~i~g~~~~~----~~~~~~~~~~~~~~~l~~~ 321 (357)
+|++|+. .+..++++++++|+++.+|..... ..++...+.. ++.++.++.... .+.++.+++++.++.+.+.
T Consensus 197 l~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 275 (305)
T cd08270 197 VDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR 275 (305)
T ss_pred EECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce
Confidence 9999987 789999999999999999865422 2344444444 578888877653 3567888999999999876
Q ss_pred E-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 322 I-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 322 i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
+ ++++++++++|++.+.+++..||+++++
T Consensus 276 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 276 IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 6 8999999999999999999999999875
No 93
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=3.8e-36 Score=276.25 Aligned_cols=292 Identities=23% Similarity=0.304 Sum_probs=247.9
Q ss_pred CcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCC
Q 018382 21 ILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGC 99 (357)
Q Consensus 21 ~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (357)
.+.+++.+.|++.++||+||+.++++|+.|+.++.|..+ ...+|.++|+|++|+|+++|++++.+++||+|++.+
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~---- 88 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG---- 88 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC----
Confidence 566778889999999999999999999999998877654 234577899999999999999999999999997531
Q ss_pred CCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCC
Q 018382 100 CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ 179 (357)
Q Consensus 100 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~ 179 (357)
..|+|++|+.++...++++|+++++++++.+++.+.+||.++.....+.
T Consensus 89 -------------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~ 137 (323)
T cd05282 89 -------------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLP 137 (323)
T ss_pred -------------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCC
Confidence 2689999999999999999999999999999999999999998888779
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh--CCccEEEEcCC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA--DSLDYIIDTVP 253 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~--~~~d~v~d~~g 253 (357)
++++|||+|+ |.+|++++++|+..|++|+++++++++.+.+++ +|++++++.+..+...+ .. .++|++|||+|
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 216 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKA-LGADEVIDSSPEDLAQRVKEATGGAGARLALDAVG 216 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHh-cCCCEEecccchhHHHHHHHHhcCCCceEEEECCC
Confidence 9999999987 999999999999999999999999999888866 99999998876444333 32 27999999999
Q ss_pred CCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCH----------HHHHHHHHHHHhcCCCccE
Q 018382 254 ANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSM----------KETKEMLEFCREKGVTSMI 322 (357)
Q Consensus 254 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~~~~~~~l~~~i 322 (357)
+. .....+++++++|+++.+|..... ..++...+..++.++.+...... +.+.++++++.++.+.+.+
T Consensus 217 ~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 295 (323)
T cd05282 217 GE-SATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPV 295 (323)
T ss_pred CH-HHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCc
Confidence 87 677889999999999999876442 33455555558888888776432 3467788889999988766
Q ss_pred -EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 323 -EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 323 -~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
+.|+++++++|++.+.+++..||++++
T Consensus 296 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 296 GAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred cceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 899999999999999998888999864
No 94
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=2.9e-36 Score=277.69 Aligned_cols=303 Identities=20% Similarity=0.228 Sum_probs=244.9
Q ss_pred eeeehc--cCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382 10 TIGWAA--KDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV 87 (357)
Q Consensus 10 ~~~~~~--~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (357)
|++|.. .+++..+.+++++.|+|.++||+||+.++++|++|+.+..|.++...+|.++|+|++|+|+.+|++++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (327)
T PRK10754 2 AKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIKV 81 (327)
T ss_pred ceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCCC
Confidence 445554 444557888899999999999999999999999999998887765556788999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382 88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT 167 (357)
Q Consensus 88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t 167 (357)
||+|+.. ....|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 82 Gd~V~~~----------------------------------~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~t 127 (327)
T PRK10754 82 GDRVVYA----------------------------------QSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLT 127 (327)
T ss_pred CCEEEEC----------------------------------CCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHH
Confidence 9999642 113589999999999999999999999999999999999
Q ss_pred hhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH---HHHhhC
Q 018382 168 VFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR---MQEAAD 243 (357)
Q Consensus 168 a~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~~ 243 (357)
||.++.....++++++|+|+|+ |.+|++++|+++..|++|+++++++++.+.+++ +|++++++.+..+. +.+...
T Consensus 128 a~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~ 206 (327)
T PRK10754 128 VYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKK-AGAWQVINYREENIVERVKEITG 206 (327)
T ss_pred HHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-CCCCEEEcCCCCcHHHHHHHHcC
Confidence 9999888777799999999975 999999999999999999999999999888866 99988887765433 333333
Q ss_pred --CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccc------eEEEEeecCH----HHHHHHH
Q 018382 244 --SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRK------AITGSFIGSM----KETKEML 310 (357)
Q Consensus 244 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~------~i~g~~~~~~----~~~~~~~ 310 (357)
++|++|||+++. .....+++++++|+++.+|..... ..+....+..++. .+.+. ..+. +.+..++
T Consensus 207 ~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 284 (327)
T PRK10754 207 GKKVRVVYDSVGKD-TWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGY-ITTREELTEASNELF 284 (327)
T ss_pred CCCeEEEEECCcHH-HHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecc-cCCHHHHHHHHHHHH
Confidence 799999999986 788899999999999999876432 1122222221111 11111 1122 2345688
Q ss_pred HHHHhcCCCcc--E-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 311 EFCREKGVTSM--I-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 311 ~~~~~~~l~~~--i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
+++.++.+++. + +.|+++++.+|++.+++++..||+|+.
T Consensus 285 ~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 285 SLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred HHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 89999999853 3 899999999999999999999999985
No 95
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=8.1e-36 Score=275.27 Aligned_cols=307 Identities=25% Similarity=0.295 Sum_probs=252.1
Q ss_pred eeeehccCCC--CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382 10 TIGWAAKDPS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFK 86 (357)
Q Consensus 10 ~~~~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~ 86 (357)
|+++++...+ ..+++++.+.|++.++|++||+.++++|+.|+....|..+ ....|.++|+|++|+|+++|++++.++
T Consensus 2 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 81 (334)
T PTZ00354 2 MRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRFK 81 (334)
T ss_pred cEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCCC
Confidence 5566654322 3566677888889999999999999999999999887654 234456899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382 87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV 166 (357)
Q Consensus 87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ 166 (357)
+||+|+.. ..+|+|++|++++.+.++++|+++++++++.+++.+.
T Consensus 82 ~Gd~V~~~-----------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ 126 (334)
T PTZ00354 82 EGDRVMAL-----------------------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFL 126 (334)
T ss_pred CCCEEEEe-----------------------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHH
Confidence 99999643 1358999999999999999999999999999999999
Q ss_pred hhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChh-HHHH---h
Q 018382 167 TVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDAT-RMQE---A 241 (357)
Q Consensus 167 ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~-~~~~---~ 241 (357)
+||+++.....++++++|+|+|+ |++|++++++|+..|++++++++++++.+.+.+ +|++++++....+ ..++ .
T Consensus 127 ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 205 (334)
T PTZ00354 127 TAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-LAAIILIRYPDEEGFAPKVKKL 205 (334)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEecCChhHHHHHHHHH
Confidence 99999988777799999999986 999999999999999998889999999888876 9999888876543 3332 2
Q ss_pred h--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cc-cchHHHhhccceEEEEeecCH----------HHHH
Q 018382 242 A--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQ-FLTPMVMLGRKAITGSFIGSM----------KETK 307 (357)
Q Consensus 242 ~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~i~g~~~~~~----------~~~~ 307 (357)
. .++|++||+.++. .+..++++++++|+++.++..... .. ++...++.+..++.++..... +.++
T Consensus 206 ~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (334)
T PTZ00354 206 TGEKGVNLVLDCVGGS-YLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFER 284 (334)
T ss_pred hCCCCceEEEECCchH-HHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHH
Confidence 2 3799999999876 888999999999999999864332 22 555556667778887765431 2346
Q ss_pred HHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382 308 EMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 353 (357)
Q Consensus 308 ~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~ 353 (357)
.+++++.++.+.+.+ +.|++++++++++.+++++..||+++++.++
T Consensus 285 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~~ 331 (334)
T PTZ00354 285 EVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNEP 331 (334)
T ss_pred HHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence 778888899888766 8999999999999999888889999987654
No 96
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=2.4e-35 Score=271.10 Aligned_cols=302 Identities=25% Similarity=0.317 Sum_probs=242.1
Q ss_pred cCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCCCCCCEEEEc
Q 018382 16 KDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94 (357)
Q Consensus 16 ~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~ 94 (357)
.+++..++++++|+|.+.++||+||+.++++|++|+..+.|.++. ...|.++|||++|+|+. +++.+|++||+|++.
T Consensus 8 ~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~ 85 (323)
T TIGR02823 8 EDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVT 85 (323)
T ss_pred CCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCCCCEEEEc
Confidence 334447789999999999999999999999999999998887532 34578899999999998 567789999999754
Q ss_pred cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhc
Q 018382 95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH 174 (357)
Q Consensus 95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~ 174 (357)
.. ..|.+..|++++|+.++.+.++++|+++++++++.+++.+.+||.++..
T Consensus 86 ~~-----------------------------~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~ 136 (323)
T TIGR02823 86 GY-----------------------------GLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMA 136 (323)
T ss_pred cC-----------------------------CCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHH
Confidence 21 0022357999999999999999999999999999999999999887654
Q ss_pred cCC--CCCCC-eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH-HHHhh-CCccEE
Q 018382 175 FGL--KQSGL-RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR-MQEAA-DSLDYI 248 (357)
Q Consensus 175 ~~~--~~~~~-~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~-~~~~~-~~~d~v 248 (357)
... +.+++ +|+|+|+ |.+|++++++|+..|++++++++++++.+.+++ +|++++++.++... +.... .++|++
T Consensus 137 ~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~d~v 215 (323)
T TIGR02823 137 LERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKE-LGASEVIDREDLSPPGKPLEKERWAGA 215 (323)
T ss_pred hhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHh-cCCcEEEccccHHHHHHHhcCCCceEE
Confidence 332 57888 9999997 999999999999999999999888888888866 99998888765432 23332 369999
Q ss_pred EEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecC--H----HHHHHHHHHHHhcCCCcc
Q 018382 249 IDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGS--M----KETKEMLEFCREKGVTSM 321 (357)
Q Consensus 249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~--~----~~~~~~~~~~~~~~l~~~ 321 (357)
+|++|+. .+..++++++++|+++.+|.... ....+...++.++.++.+..... . +.+..+.+++.++.+.+.
T Consensus 216 ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (323)
T TIGR02823 216 VDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI 294 (323)
T ss_pred EECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc
Confidence 9999987 78899999999999999987643 22233344557888888865431 1 234556666777777665
Q ss_pred EEEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 322 IEVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 322 i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
++.|+++++++|++.+.+++..||+++++
T Consensus 295 ~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 295 TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 68999999999999999999999999864
No 97
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=1.7e-35 Score=272.36 Aligned_cols=308 Identities=22% Similarity=0.281 Sum_probs=237.7
Q ss_pred eeeehccCCC--CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCC-CCCCCCCccCccccEEEEEeCCCCCCCC
Q 018382 10 TIGWAAKDPS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDL-GMSNYPMVPGHEVVGEVKEVGSEVSNFK 86 (357)
Q Consensus 10 ~~~~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~-~~~~~p~~lG~e~~G~V~~vG~~v~~~~ 86 (357)
|++|++...+ ..+.+++++.|.|+++||+||+.++++|++|.....+.. ....+|.++|||++|+|+++| +.+|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 3566654333 357788999999999999999999999999987664321 122457889999999999964 56799
Q ss_pred CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382 87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV 166 (357)
Q Consensus 87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ 166 (357)
+||+|++.+. ..|....|+|++|+.++++.++++|+++++++++.+++.+.
T Consensus 79 ~Gd~V~~~~~-----------------------------~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ 129 (326)
T cd08289 79 PGDEVIVTSY-----------------------------DLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGF 129 (326)
T ss_pred CCCEEEEccc-----------------------------ccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHH
Confidence 9999975421 01233579999999999999999999999999999999999
Q ss_pred hhhhhhhccC---CCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh--hHHHH
Q 018382 167 TVFSPLSHFG---LKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA--TRMQE 240 (357)
Q Consensus 167 ta~~~l~~~~---~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~ 240 (357)
|||.++.... ....+++|||+|+ |.+|++++|+|+..|++|+++++++++.+.+++ +|++++++.++. +.+..
T Consensus 130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~ 208 (326)
T cd08289 130 TAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK-LGAKEVIPREELQEESIKP 208 (326)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cCCCEEEcchhHHHHHHHh
Confidence 9998875432 2345789999987 999999999999999999999999999988876 999998887653 22222
Q ss_pred hh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecC--HHHHHHHHHHHHh-
Q 018382 241 AA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGS--MKETKEMLEFCRE- 315 (357)
Q Consensus 241 ~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~~~~- 315 (357)
.. .++|++||++|+. .+..++++++++|+++.+|..... ...+...++.++.++.+..... ......+++.+.+
T Consensus 209 ~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (326)
T cd08289 209 LEKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATD 287 (326)
T ss_pred hccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhh
Confidence 22 3799999999986 889999999999999999875332 2333455667888988875421 2223334443332
Q ss_pred ---cCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 316 ---KGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 316 ---~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
..+...+ ++|+++++++||+.+.+++..||+++++
T Consensus 288 ~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 288 LKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred cCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 2222345 8999999999999999999999999864
No 98
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=3.1e-35 Score=271.00 Aligned_cols=299 Identities=25% Similarity=0.344 Sum_probs=246.8
Q ss_pred eeeehc--cCC--CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCC
Q 018382 10 TIGWAA--KDP--SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSN 84 (357)
Q Consensus 10 ~~~~~~--~~~--~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~ 84 (357)
|++|.. .++ ++++++++++.|.+.++|++||+.++++|++|++...|.++ ...+|.++|+|++|+|+.+|+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~ 81 (329)
T cd08250 2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD 81 (329)
T ss_pred ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence 455554 333 56788899999999999999999999999999999888664 2457889999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccch
Q 018382 85 FKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCA 164 (357)
Q Consensus 85 ~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~ 164 (357)
|++||+|++. ..|+|++|+.++.+.++++|++ +.+++.++.+
T Consensus 82 ~~~Gd~V~~~------------------------------------~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~ 123 (329)
T cd08250 82 FKVGDAVATM------------------------------------SFGAFAEYQVVPARHAVPVPEL--KPEVLPLLVS 123 (329)
T ss_pred CCCCCEEEEe------------------------------------cCcceeEEEEechHHeEECCCC--cchhhhcccH
Confidence 9999999753 3689999999999999999997 4577889999
Q ss_pred hhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH---HHH
Q 018382 165 GVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR---MQE 240 (357)
Q Consensus 165 ~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~ 240 (357)
+.+||+++.....++++++|+|+|+ |.+|++++++++..|++|+++++++++.+.+++ +|++++++.+..+. +..
T Consensus 124 ~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~ 202 (329)
T cd08250 124 GLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCDRPINYKTEDLGEVLKK 202 (329)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH-cCCceEEeCCCccHHHHHHH
Confidence 9999999988777899999999986 999999999999999999999999888888866 99988887665432 222
Q ss_pred hh-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-----------cccchHHHhhccceEEEEeecC-----H
Q 018382 241 AA-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-----------MQFLTPMVMLGRKAITGSFIGS-----M 303 (357)
Q Consensus 241 ~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~~~~~~i~g~~~~~-----~ 303 (357)
.. +++|++||++|+. .+..++++++++|+++.+|..... ..+. ...+.++.++.++.... .
T Consensus 203 ~~~~~vd~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 280 (329)
T cd08250 203 EYPKGVDVVYESVGGE-MFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAKLIP 280 (329)
T ss_pred hcCCCCeEEEECCcHH-HHHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHHHHH
Confidence 22 3799999999986 888999999999999999865432 1122 23456788888887643 2
Q ss_pred HHHHHHHHHHHhcCCCcc--E-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 304 KETKEMLEFCREKGVTSM--I-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 304 ~~~~~~~~~~~~~~l~~~--i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
+.+.++++++.++.+++. . +.|+++++++|++.+++++..||++++
T Consensus 281 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 281 QHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 456788889999988873 2 569999999999999998888998874
No 99
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4e-35 Score=268.83 Aligned_cols=296 Identities=24% Similarity=0.283 Sum_probs=241.0
Q ss_pred CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCC
Q 018382 20 GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGC 99 (357)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (357)
..+.+.+.+.|.+.++||+||++++++|++|+....|..+....|.++|+|++|+|+++|. ..+++||+|+......
T Consensus 13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~- 89 (320)
T cd08243 13 EVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGM- 89 (320)
T ss_pred cceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCCCCEEEEecCCC-
Confidence 4566778888889999999999999999999999888765455678899999999999995 5799999997542100
Q ss_pred CCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCC
Q 018382 100 CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ 179 (357)
Q Consensus 100 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~ 179 (357)
+...+|+|++|+.++...++++|+++++++++++++++.+||.++.....++
T Consensus 90 ----------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~ 141 (320)
T cd08243 90 ----------------------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQ 141 (320)
T ss_pred ----------------------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCC
Confidence 1235699999999999999999999999999999999999999998888779
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC--hhHHHHhhCCccEEEEcCCCCC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD--ATRMQEAADSLDYIIDTVPANH 256 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~--~~~~~~~~~~~d~v~d~~g~~~ 256 (357)
++++|||+|+ |.+|++++|+|+..|++|+++++++++.+.+.+ +|++++++... .+.+....+++|+++|++++.
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~- 219 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKE-LGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTA- 219 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEEEecCccHHHHHHHhCCCceEEEECCChH-
Confidence 9999999987 999999999999999999999999998888866 99988875432 122333334799999999986
Q ss_pred ChHHHHhccccCCeEEEEccCCCCcc---cchHHH--hhccceEEEEeecC--HHHHHHHHHHHHhcCCCccE-EEeecc
Q 018382 257 PLEPYLSLLKLDGKLILTGVINTPMQ---FLTPMV--MLGRKAITGSFIGS--MKETKEMLEFCREKGVTSMI-EVIKMD 328 (357)
Q Consensus 257 ~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~--~~~~~~i~g~~~~~--~~~~~~~~~~~~~~~l~~~i-~~~~~~ 328 (357)
.+..++++++++|+++.+|....... ...... ..++.++.+..... .+.++++++++.++.+++.. +.|+++
T Consensus 220 ~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (320)
T cd08243 220 TLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTFD 299 (320)
T ss_pred HHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcHH
Confidence 88999999999999999986433211 111222 24566666665432 24578889999999988755 899999
Q ss_pred cHHHHHHHHHcCCccEEEEE
Q 018382 329 YVNKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 329 ~~~~a~~~~~~~~~~Gkvvi 348 (357)
++++|++.+++++..||+++
T Consensus 300 ~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 300 EIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred HHHHHHHHHHhCCCCCcEEe
Confidence 99999999999888899876
No 100
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=1.6e-35 Score=273.96 Aligned_cols=307 Identities=25% Similarity=0.308 Sum_probs=241.0
Q ss_pred eeehccCC-CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCC
Q 018382 11 IGWAAKDP-SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGD 89 (357)
Q Consensus 11 ~~~~~~~~-~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (357)
++++...+ ++.+++++++.|+|+++||+||+.++++|++|+....+.. ....|.++|+|++|+|+.+|++++.|++||
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (339)
T cd08249 2 KAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVGD 80 (339)
T ss_pred ceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCCC
Confidence 45555432 4778899999999999999999999999999998876654 123567899999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhh
Q 018382 90 KVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVF 169 (357)
Q Consensus 90 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~ 169 (357)
+|+..+... |+ +...+|+|++|++++.+.++++|+++++++++.+++.+.+||
T Consensus 81 ~V~~~~~~~-~~--------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~ 133 (339)
T cd08249 81 RVAGFVHGG-NP--------------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAA 133 (339)
T ss_pred EEEEEeccc-cC--------------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHH
Confidence 997653210 00 123579999999999999999999999999999999999999
Q ss_pred hhhhccCCC----------CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHH
Q 018382 170 SPLSHFGLK----------QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM 238 (357)
Q Consensus 170 ~~l~~~~~~----------~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~ 238 (357)
+++.....+ +++++|+|+|+ |.+|++++++|+..|++|+.++ ++++.+.+++ +|++++++.++.+..
T Consensus 134 ~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~-~g~~~v~~~~~~~~~ 211 (339)
T cd08249 134 LALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKS-LGADAVFDYHDPDVV 211 (339)
T ss_pred HHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHh-cCCCEEEECCCchHH
Confidence 998766543 68999999997 9999999999999999999888 5577777766 999999988765443
Q ss_pred HHh---h-CCccEEEEcCCCCCChHHHHhcccc--CCeEEEEccCCCCcccchHHHhhccceEEEEee---------cCH
Q 018382 239 QEA---A-DSLDYIIDTVPANHPLEPYLSLLKL--DGKLILTGVINTPMQFLTPMVMLGRKAITGSFI---------GSM 303 (357)
Q Consensus 239 ~~~---~-~~~d~v~d~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~---------~~~ 303 (357)
+.+ . +++|++||++|....+..+++++++ +|+++.++.......+... . ....+..... ...
T Consensus 212 ~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 288 (339)
T cd08249 212 EDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPRKG-V--KVKFVLGYTVFGEIPEDREFGE 288 (339)
T ss_pred HHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCCCC-c--eEEEEEeeeecccccccccchH
Confidence 333 2 3799999999984488999999999 9999999876432211110 0 1111111111 112
Q ss_pred HHHHHHHHHHHhcCCCccE-EEee--cccHHHHHHHHHcCC-ccEEEEEec
Q 018382 304 KETKEMLEFCREKGVTSMI-EVIK--MDYVNKAFERLEKND-VRYRFVVDV 350 (357)
Q Consensus 304 ~~~~~~~~~~~~~~l~~~i-~~~~--~~~~~~a~~~~~~~~-~~Gkvvi~~ 350 (357)
..+..+++++.++.+.+.. .+++ ++++++||+.+.+++ ..||+++++
T Consensus 289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 289 VFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 4567788899999988754 7888 999999999999999 889999875
No 101
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=1.5e-34 Score=267.24 Aligned_cols=293 Identities=21% Similarity=0.256 Sum_probs=240.5
Q ss_pred cceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCC
Q 018382 22 LSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCR 101 (357)
Q Consensus 22 ~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g 101 (357)
++.++++.|.+.++||+||+.++++|++|+..+.+..+....|.++|||++|+|+++|++++.|++||+|+....
T Consensus 18 ~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----- 92 (336)
T cd08252 18 LIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGD----- 92 (336)
T ss_pred eeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCC-----
Confidence 556678888899999999999999999999988776654456778999999999999999999999999964310
Q ss_pred CCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCC-
Q 018382 102 NCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQS- 180 (357)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~- 180 (357)
....|+|++|+.++.+.++++|+++++++++.+++.+.+||.++.....+.+
T Consensus 93 ---------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~ 145 (336)
T cd08252 93 ---------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISED 145 (336)
T ss_pred ---------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCC
Confidence 1246899999999999999999999999999999999999999877666676
Q ss_pred ----CCeEEEEec-ChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh--hHHHHhh-CCccEEEEc
Q 018382 181 ----GLRGGILGL-GGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYLVSSDA--TRMQEAA-DSLDYIIDT 251 (357)
Q Consensus 181 ----~~~VlI~G~-g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~~~-~~~d~v~d~ 251 (357)
+++|+|+|+ |++|++++++++..| ++|+++++++++.+.+.+ +|++++++.+.. +.+.... +++|++||+
T Consensus 146 ~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~ 224 (336)
T cd08252 146 AENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKE-LGADHVINHHQDLAEQLEALGIEPVDYIFCL 224 (336)
T ss_pred cCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCcEEEeCCccHHHHHHhhCCCCCCEEEEc
Confidence 999999985 999999999999999 899999999889888876 999999887641 2222222 379999999
Q ss_pred CCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecC------------HHHHHHHHHHHHhcCCC
Q 018382 252 VPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGS------------MKETKEMLEFCREKGVT 319 (357)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~------------~~~~~~~~~~~~~~~l~ 319 (357)
++....+..++++++++|+++.+|... ..++...+..++.++.+..... .+.++++++++.++.+.
T Consensus 225 ~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 302 (336)
T cd08252 225 TDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLK 302 (336)
T ss_pred cCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEe
Confidence 996447889999999999999998653 2333334445677777655432 13467888999999888
Q ss_pred ccE----EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 320 SMI----EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 320 ~~i----~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
+.+ +.++++++++|++.+++++..||++++
T Consensus 303 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 303 TTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred cceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 643 357999999999999999999999864
No 102
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.1e-34 Score=269.76 Aligned_cols=293 Identities=27% Similarity=0.322 Sum_probs=233.7
Q ss_pred cceeeeecCCC-CCCcEEEEEeeeccccchHHHHhcCCC---------------CCCCCCccCccccEEEEEeCCCCCCC
Q 018382 22 LSPYTYTLRNT-GAEDVYIKVLYCGICHTDIHQIKNDLG---------------MSNYPMVPGHEVVGEVKEVGSEVSNF 85 (357)
Q Consensus 22 ~~~~~~~~p~~-~~~evlV~v~~~~~~~~D~~~~~g~~~---------------~~~~p~~lG~e~~G~V~~vG~~v~~~ 85 (357)
+++++++.|+| .++||+||+.++++|++|+.+..|... ....|.++|||++|+|+++|+++++|
T Consensus 16 ~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~ 95 (350)
T cd08248 16 LLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSF 95 (350)
T ss_pred eeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccC
Confidence 78889999999 499999999999999999998877421 23557899999999999999999999
Q ss_pred CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchh
Q 018382 86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAG 165 (357)
Q Consensus 86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~ 165 (357)
++||+|++.+. ....|+|++|+.++++.++++|+++++++++.+++.+
T Consensus 96 ~~Gd~V~~~~~--------------------------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~ 143 (350)
T cd08248 96 EIGDEVWGAVP--------------------------------PWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAG 143 (350)
T ss_pred CCCCEEEEecC--------------------------------CCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHH
Confidence 99999975421 1146999999999999999999999999999999999
Q ss_pred hhhhhhhhccCCCCC----CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH
Q 018382 166 VTVFSPLSHFGLKQS----GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240 (357)
Q Consensus 166 ~ta~~~l~~~~~~~~----~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~ 240 (357)
.+||+++.+...+.+ |++|+|+|+ |++|++++++++..|++|+++.++ ++.+.+++ +|.+++++..+.+..++
T Consensus 144 ~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~-~g~~~~~~~~~~~~~~~ 221 (350)
T cd08248 144 LTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKS-LGADDVIDYNNEDFEEE 221 (350)
T ss_pred HHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHH-hCCceEEECCChhHHHH
Confidence 999999877776554 999999986 999999999999999999988865 45555555 99988888776555444
Q ss_pred hh--CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC--c--cc-----chH-HHhh-------ccceE-EEEee
Q 018382 241 AA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP--M--QF-----LTP-MVML-------GRKAI-TGSFI 300 (357)
Q Consensus 241 ~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~--~~-----~~~-~~~~-------~~~~i-~g~~~ 300 (357)
+. +++|++||++|.. ....++++++++|+++.++..... . .. ... .+.. +...+ .+...
T Consensus 222 l~~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (350)
T cd08248 222 LTERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFS 300 (350)
T ss_pred HHhcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence 43 3799999999988 888999999999999998754211 0 00 000 0110 11111 11122
Q ss_pred cCHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 301 GSMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 301 ~~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
.....+..+++++.++.+.+.+ +.|+++++.+|++.+.+++..+|++++
T Consensus 301 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 301 PSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred CCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 2346788999999999988766 899999999999999988888898863
No 103
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2.2e-34 Score=263.29 Aligned_cols=291 Identities=20% Similarity=0.277 Sum_probs=235.9
Q ss_pred CCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHH-hcCCCC--CCCCCccCccccEEEEEeCCCCCCCCCCCEEEEc
Q 018382 18 PSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQI-KNDLGM--SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94 (357)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~-~g~~~~--~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~ 94 (357)
+++.+++.+++.|++.++||+||+.++++|++|++.+ .|..+. ...|.++|+|++|+|+++|+++++|++||+|+..
T Consensus 3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 82 (312)
T cd08269 3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGL 82 (312)
T ss_pred CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEe
Confidence 3457889999999999999999999999999999987 665431 2247789999999999999999999999999753
Q ss_pred cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhc
Q 018382 95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH 174 (357)
Q Consensus 95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~ 174 (357)
..|+|++|+.++.+.++++|+++ ..++....++.++|+++.
T Consensus 83 ------------------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~- 123 (312)
T cd08269 83 ------------------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR- 123 (312)
T ss_pred ------------------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-
Confidence 35889999999999999999998 233322377788998887
Q ss_pred cCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh--CCccEE
Q 018382 175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA--DSLDYI 248 (357)
Q Consensus 175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~--~~~d~v 248 (357)
...++++++|+|+|+|.+|.+++|+|+..|++ |+++++++++.+.+.+ +|++++++.+..+..+. .. .++|++
T Consensus 124 ~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~l~~~~~~~~vd~v 202 (312)
T cd08269 124 RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARE-LGATEVVTDDSEAIVERVRELTGGAGADVV 202 (312)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCceEecCCCcCHHHHHHHHcCCCCCCEE
Confidence 56668999999998899999999999999998 9999988888776665 99998888665443333 33 379999
Q ss_pred EEcCCCCCChHHHHhccccCCeEEEEccCC-CCcccchHHHhhccceEEEEeecCH----HHHHHHHHHHHhcCCCc--c
Q 018382 249 IDTVPANHPLEPYLSLLKLDGKLILTGVIN-TPMQFLTPMVMLGRKAITGSFIGSM----KETKEMLEFCREKGVTS--M 321 (357)
Q Consensus 249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~~~~~~l~~--~ 321 (357)
|||.|.......++++++++|+++.+|... ....++...+..++.++.++..... +.++.++++++++.+++ .
T Consensus 203 ld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 282 (312)
T cd08269 203 IEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSL 282 (312)
T ss_pred EECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhh
Confidence 999987657888999999999999998653 2233444455677777777654332 57889999999999886 3
Q ss_pred E-EEeecccHHHHHHHHHcCCc-cEEEEE
Q 018382 322 I-EVIKMDYVNKAFERLEKNDV-RYRFVV 348 (357)
Q Consensus 322 i-~~~~~~~~~~a~~~~~~~~~-~Gkvvi 348 (357)
+ ++|+++++++|++.+++++. .+|+++
T Consensus 283 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 283 LTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred eeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 5 88999999999999998865 588876
No 104
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=2.8e-34 Score=263.33 Aligned_cols=309 Identities=23% Similarity=0.291 Sum_probs=250.1
Q ss_pred eeeehccCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCC
Q 018382 10 TIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVG 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (357)
..++..++.+..+++.+++.|.+.+++++|++.++++|++|+....|..+ ....|.++|||++|+|+++|+++++|++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G 82 (325)
T cd08253 3 AIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLKVG 82 (325)
T ss_pred eEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCCCC
Confidence 33444343445688889999999999999999999999999998877654 33567889999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhh
Q 018382 89 DKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTV 168 (357)
Q Consensus 89 d~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta 168 (357)
|+|+...... ....|++++|+.++.+.++++|+++++++++.+++.+.+|
T Consensus 83 d~v~~~~~~~------------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a 132 (325)
T cd08253 83 DRVWLTNLGW------------------------------GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTA 132 (325)
T ss_pred CEEEEecccc------------------------------CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHH
Confidence 9997642100 0146899999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---h--
Q 018382 169 FSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---A-- 242 (357)
Q Consensus 169 ~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~-- 242 (357)
|+++.....+.++++++|+|+ |++|++++++++..|++|+++++++++.+.+.+ +|++++++.+..+..+.+ .
T Consensus 133 ~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 211 (325)
T cd08253 133 YRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQ-AGADAVFNYRAEDLADRILAATAG 211 (325)
T ss_pred HHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEeCCCcCHHHHHHHHcCC
Confidence 999988777789999999986 999999999999999999999999988888876 999888887665443332 2
Q ss_pred CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCH------HHHHHHHHHHHhc
Q 018382 243 DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSM------KETKEMLEFCREK 316 (357)
Q Consensus 243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~------~~~~~~~~~~~~~ 316 (357)
+++|+++++++.. .....+++++++|+++.++.......+....++.++.++.+...+.. +.++.+.+++.++
T Consensus 212 ~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (325)
T cd08253 212 QGVDVIIEVLANV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADG 290 (325)
T ss_pred CceEEEEECCchH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCC
Confidence 3799999999987 67888999999999999987542233344444566777766654321 2345566777788
Q ss_pred CCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 317 GVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 317 ~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
.+++.. +.|++++++++++.+.++...||+++++
T Consensus 291 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 291 ALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred CccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 887765 8999999999999999999999999864
No 105
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=2.8e-34 Score=245.92 Aligned_cols=293 Identities=22% Similarity=0.232 Sum_probs=239.1
Q ss_pred CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeC--CCCCCCCCCCEEEEcccc
Q 018382 20 GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVG--SEVSNFKVGDKVGVGVLV 97 (357)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~ 97 (357)
.+|+++|.++|+|++||||+|+.|.+++|. ...+....+....|.-+|...+|.++... |+...|++||.|.
T Consensus 25 d~F~lee~~vp~p~~GqvLl~~~ylS~DPy-mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~----- 98 (340)
T COG2130 25 DDFRLEEVDVPEPGEGQVLLRTLYLSLDPY-MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVV----- 98 (340)
T ss_pred CCceeEeccCCCCCcCceEEEEEEeccCHH-HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEE-----
Confidence 568999999999999999999999999993 22222233344456667766655444333 5577799999995
Q ss_pred CCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCcccc--ccccchhhhhhhhhhcc
Q 018382 98 GCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQA--APLLCAGVTVFSPLSHF 175 (357)
Q Consensus 98 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~a--a~~~~~~~ta~~~l~~~ 175 (357)
...+|++|.+++++.+.|++++.-...+ ..+.-+..|||.+|.+.
T Consensus 99 ---------------------------------~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~i 145 (340)
T COG2130 99 ---------------------------------GVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDI 145 (340)
T ss_pred ---------------------------------ecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHh
Confidence 3458999999999999999865433222 25777889999999999
Q ss_pred CCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC----CccEEEE
Q 018382 176 GLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD----SLDYIID 250 (357)
Q Consensus 176 ~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~----~~d~v~d 250 (357)
+..++|++|+|-|| |++|..+.|+||..|++|+.++.+++|.+++.+.+|.|.++|++.++..+.+.+ ++|+.||
T Consensus 146 gqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfe 225 (340)
T COG2130 146 GQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFE 225 (340)
T ss_pred cCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEE
Confidence 99999999999986 999999999999999999999999999999999899999999999877666653 9999999
Q ss_pred cCCCCCChHHHHhccccCCeEEEEccCCCC------c-ccchHHHhhccceEEEEeec-CH-----HHHHHHHHHHHhcC
Q 018382 251 TVPANHPLEPYLSLLKLDGKLILTGVINTP------M-QFLTPMVMLGRKAITGSFIG-SM-----KETKEMLEFCREKG 317 (357)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~-~~~~~~~~~~~~~i~g~~~~-~~-----~~~~~~~~~~~~~~ 317 (357)
++|+. .++..+..|+..+|++.+|..+.. . .-....++.+++++.|+... .. +..+++.+|+.+|+
T Consensus 226 NVGg~-v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GK 304 (340)
T COG2130 226 NVGGE-VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGK 304 (340)
T ss_pred cCCch-HHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCc
Confidence 99999 999999999999999999864321 1 12234567788999998872 11 55689999999999
Q ss_pred CCccEEEe-ecccHHHHHHHHHcCCccEEEEEecCC
Q 018382 318 VTSMIEVI-KMDYVNKAFERLEKNDVRYRFVVDVAG 352 (357)
Q Consensus 318 l~~~i~~~-~~~~~~~a~~~~~~~~~~Gkvvi~~~~ 352 (357)
|+-...++ .|+.+++||.-|-+++.+||.|+++.+
T Consensus 305 i~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 305 IQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred eeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 98877544 599999999999999999999999853
No 106
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=1.4e-33 Score=259.32 Aligned_cols=308 Identities=21% Similarity=0.258 Sum_probs=242.5
Q ss_pred eeeehccCC--CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382 10 TIGWAAKDP--SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFK 86 (357)
Q Consensus 10 ~~~~~~~~~--~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~ 86 (357)
|++++..+. +..+.++++|.|+|+++||+||+.++++|++|+.+..|..+ ...+|.++|||++|+|++ +++++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 346665432 23688899999999999999999999999999998877653 224577899999999999 7778899
Q ss_pred CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382 87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV 166 (357)
Q Consensus 87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ 166 (357)
+||+|++... ..+....|+|++|+.++.+.++++|+++++++++.+++.++
T Consensus 79 ~Gd~V~~~~~-----------------------------~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ 129 (324)
T cd08288 79 PGDRVVLTGW-----------------------------GVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGF 129 (324)
T ss_pred CCCEEEECCc-----------------------------cCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHH
Confidence 9999975310 00112478999999999999999999999999999999999
Q ss_pred hhhhhhh---ccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH-HHHh
Q 018382 167 TVFSPLS---HFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR-MQEA 241 (357)
Q Consensus 167 ta~~~l~---~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~-~~~~ 241 (357)
+++.++. ......++++|+|+|+ |++|++++|+|+.+|++|++++.++++.+.+.+ +|+++++++++... +..+
T Consensus 130 ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~ 208 (324)
T cd08288 130 TAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRS-LGASEIIDRAELSEPGRPL 208 (324)
T ss_pred HHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-cCCCEEEEcchhhHhhhhh
Confidence 9987754 3444236789999987 999999999999999999999999999888866 99999998765332 2223
Q ss_pred h-CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecC------HHHHHHHHHHH
Q 018382 242 A-DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGS------MKETKEMLEFC 313 (357)
Q Consensus 242 ~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~~ 313 (357)
. .++|.+||++++. .....+..++.+|+++.+|.... ...+....++.++.++.+..... .+.+..+.+++
T Consensus 209 ~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (324)
T cd08288 209 QKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDL 287 (324)
T ss_pred ccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHH
Confidence 2 3689999999985 67778888999999999887532 12233444457888888865321 23456677778
Q ss_pred HhcCCCccEEEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 314 REKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 314 ~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
.++.+.+.++.++++++++|++.+++++..||+++++
T Consensus 288 ~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 288 DPALLEALTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred hcCCccccceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 8888866459999999999999999999999999864
No 107
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=1.5e-33 Score=258.14 Aligned_cols=302 Identities=26% Similarity=0.343 Sum_probs=248.1
Q ss_pred eeeehcc--CCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382 10 TIGWAAK--DPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFK 86 (357)
Q Consensus 10 ~~~~~~~--~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~ 86 (357)
|++++.. +.+..+++.+.+.|.+.++|++||+.++++|++|+....|.++ ....|.++|||++|+|+++|+++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 3455543 2344577778888888999999999999999999998877654 234578899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382 87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV 166 (357)
Q Consensus 87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ 166 (357)
+||+|+.. ..+|+|++|+.++.+.++++|+++++++++.++..+.
T Consensus 81 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~ 125 (323)
T cd05276 81 VGDRVCAL-----------------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFF 125 (323)
T ss_pred CCCEEEEe-----------------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHH
Confidence 99999643 2358999999999999999999999999999999999
Q ss_pred hhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh
Q 018382 167 TVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA 242 (357)
Q Consensus 167 ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~ 242 (357)
++|.++.....+.++++|+|+|+ |++|++++++++..|++|+++++++++.+.+.+ +|.+.+++....+.... ..
T Consensus 126 ~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 204 (323)
T cd05276 126 TAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRA-LGADVAINYRTEDFAEEVKEAT 204 (323)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCCEEEeCCchhHHHHHHHHh
Confidence 99999887777789999999987 999999999999999999999999888888866 99888888766443333 22
Q ss_pred --CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecCH----------HHHHHH
Q 018382 243 --DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGSM----------KETKEM 309 (357)
Q Consensus 243 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~ 309 (357)
.++|++|++.|+. .....+++++++|+++.++..... .......++.++.++.++..... +.+.++
T Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
T cd05276 205 GGRGVDVILDMVGGD-YLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHV 283 (323)
T ss_pred CCCCeEEEEECCchH-HHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHH
Confidence 3799999999987 688899999999999999765332 23344445568888888775432 234667
Q ss_pred HHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382 310 LEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 310 ~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi 348 (357)
++++.++.+.+.. +.|+++++++|++.+.++...||+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 284 WPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 7888889887766 89999999999999998888888874
No 108
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=3.2e-33 Score=255.64 Aligned_cols=294 Identities=26% Similarity=0.290 Sum_probs=242.4
Q ss_pred CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccC
Q 018382 19 SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVG 98 (357)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 98 (357)
+..+.+.+.+.|.+.++|++|++.++++|++|+.+..+..+. .+|.++|+|++|+|+.+|+++.+|++||+|++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~--- 86 (320)
T cd05286 11 PEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG--- 86 (320)
T ss_pred ccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCCCEEEEec---
Confidence 345666677777889999999999999999999998876543 4577899999999999999999999999996430
Q ss_pred CCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCC
Q 018382 99 CCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLK 178 (357)
Q Consensus 99 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~ 178 (357)
..|+|++|+.++.+.++++|+++++++++.++..+.++|.++.....+
T Consensus 87 --------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 134 (320)
T cd05286 87 --------------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPV 134 (320)
T ss_pred --------------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCC
Confidence 268899999999999999999999999999999999999998887777
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh--CCccEEEEcC
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA--DSLDYIIDTV 252 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~--~~~d~v~d~~ 252 (357)
.++++|+|+|+ |++|++++++++..|++|+++++++++.+.+++ +|++++++........ ... .++|++|+|+
T Consensus 135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 213 (320)
T cd05286 135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARA-AGADHVINYRDEDFVERVREITGGRGVDVVYDGV 213 (320)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-CCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECC
Confidence 99999999996 999999999999999999999999999888866 9999888776544333 332 2799999999
Q ss_pred CCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeec----CH----HHHHHHHHHHHhcCCCccE-
Q 018382 253 PANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIG----SM----KETKEMLEFCREKGVTSMI- 322 (357)
Q Consensus 253 g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~----~~----~~~~~~~~~~~~~~l~~~i- 322 (357)
++. ....++++++++|+++.+|..... ..++...+..++.++.+.... .. +.+..+++++.++.+.+.+
T Consensus 214 ~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 292 (320)
T cd05286 214 GKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIG 292 (320)
T ss_pred CcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCccc
Confidence 986 888999999999999999865433 223333344667776544321 12 2345678888889888766
Q ss_pred EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 323 EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 323 ~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
+.|+++++++|++++.+++..||+++++
T Consensus 293 ~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 293 KRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred ceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 8999999999999999998889998753
No 109
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=9.7e-34 Score=261.02 Aligned_cols=289 Identities=24% Similarity=0.236 Sum_probs=234.7
Q ss_pred CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018382 19 SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGV 95 (357)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 95 (357)
++.+.+.+++.|++.++||+||+.++++|+.|.....+... ....+.++|+|++|+|+++|++ +|++||+|+.
T Consensus 17 ~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~-- 92 (329)
T cd05288 17 PDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSG-- 92 (329)
T ss_pred ccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEec--
Confidence 34678889999999999999999999999988765554321 1123457899999999999965 7999999963
Q ss_pred ccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeC-cceEECCCCCC--cccccc-ccchhhhhhhh
Q 018382 96 LVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQ-KFVVKIPDGMA--LEQAAP-LLCAGVTVFSP 171 (357)
Q Consensus 96 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~-~~~~~lP~~l~--~~~aa~-~~~~~~ta~~~ 171 (357)
.++|++|+.++. +.++++|++++ +.++++ +++.+.+||++
T Consensus 93 ------------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~ 136 (329)
T cd05288 93 ------------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFG 136 (329)
T ss_pred ------------------------------------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHH
Confidence 247999999999 99999999995 555555 89999999999
Q ss_pred hhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---h-CCcc
Q 018382 172 LSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---A-DSLD 246 (357)
Q Consensus 172 l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~-~~~d 246 (357)
+.....+.++++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++.+|++++++.++.+..+++ . +++|
T Consensus 137 l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d 216 (329)
T cd05288 137 LTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGID 216 (329)
T ss_pred HHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCce
Confidence 988777789999999985 9999999999999999999999988888877766899999888765443332 2 4799
Q ss_pred EEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcc------cchHHHhhccceEEEEeecCH-----HHHHHHHHHHHh
Q 018382 247 YIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ------FLTPMVMLGRKAITGSFIGSM-----KETKEMLEFCRE 315 (357)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~~~~ 315 (357)
++||++|+. .+..++++++++|+++.+|....... ++....+.++.++.+...... +.+.++++++.+
T Consensus 217 ~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (329)
T cd05288 217 VYFDNVGGE-ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAE 295 (329)
T ss_pred EEEEcchHH-HHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHC
Confidence 999999986 88899999999999999986543211 224445677888888765443 456788899999
Q ss_pred cCCCccE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382 316 KGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 316 ~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi 348 (357)
+.+++.. ..+++++++++++.+.+++..||+++
T Consensus 296 g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 296 GKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred CCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence 9988744 77999999999999998888888874
No 110
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.3e-33 Score=258.74 Aligned_cols=294 Identities=24% Similarity=0.322 Sum_probs=235.8
Q ss_pred cCCCCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCCCCCCEEEEc
Q 018382 16 KDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVG 94 (357)
Q Consensus 16 ~~~~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~ 94 (357)
.+.+..+++.+.+.|.|.++||+|++.++++|++|+.++.|..+. ..+|.++|+|++|+|+.+|++++.|++||+|+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~ 88 (331)
T cd08273 9 RGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAAL 88 (331)
T ss_pred CCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCCCCEEEEe
Confidence 334456888899999999999999999999999999998886542 2467789999999999999999999999999753
Q ss_pred cccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhc
Q 018382 95 VLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSH 174 (357)
Q Consensus 95 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~ 174 (357)
. ..|++++|+.++.+.++++|+++++++++.+++.+.+||.++..
T Consensus 89 ~-----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~ 133 (331)
T cd08273 89 T-----------------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHR 133 (331)
T ss_pred C-----------------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence 1 24889999999999999999999999999999999999999988
Q ss_pred cCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH-Hh-hCCccEEEEc
Q 018382 175 FGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ-EA-ADSLDYIIDT 251 (357)
Q Consensus 175 ~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~-~~-~~~~d~v~d~ 251 (357)
...+.++++|+|+|+ |++|++++++++..|++|+++++ +++.+.+++ +|++. ++.+..+..+ .. .+++|++|++
T Consensus 134 ~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~ 210 (331)
T cd08273 134 AAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALRE-LGATP-IDYRTKDWLPAMLTPGGVDVVFDG 210 (331)
T ss_pred hcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHHH-cCCeE-EcCCCcchhhhhccCCCceEEEEC
Confidence 777799999999987 99999999999999999999987 777777766 99754 3443332222 12 2479999999
Q ss_pred CCCCCChHHHHhccccCCeEEEEccCCCCcc--cch--------------HHHhhccceEEEEeec-------CHHHHHH
Q 018382 252 VPANHPLEPYLSLLKLDGKLILTGVINTPMQ--FLT--------------PMVMLGRKAITGSFIG-------SMKETKE 308 (357)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~--------------~~~~~~~~~i~g~~~~-------~~~~~~~ 308 (357)
+++. ....++++++++|+++.+|....... ... ...+.+..+....... ..+.+..
T Consensus 211 ~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 289 (331)
T cd08273 211 VGGE-SYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTE 289 (331)
T ss_pred CchH-HHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHH
Confidence 9998 58899999999999999987543221 110 0111222222222221 1256788
Q ss_pred HHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382 309 MLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 309 ~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi 348 (357)
+++++.++.+.+.+ ++|+++++++|++.+.+++..||+++
T Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 290 LLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 89999999998766 89999999999999999888899886
No 111
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=2.4e-33 Score=260.88 Aligned_cols=308 Identities=21% Similarity=0.215 Sum_probs=232.3
Q ss_pred eeehccCCCCCcceeeeecCCC---CCCcEEEEEeeeccccchHHHHhcCCCCCC-CCCccCccccEEEEEeCCCCC-CC
Q 018382 11 IGWAAKDPSGILSPYTYTLRNT---GAEDVYIKVLYCGICHTDIHQIKNDLGMSN-YPMVPGHEVVGEVKEVGSEVS-NF 85 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~---~~~evlV~v~~~~~~~~D~~~~~g~~~~~~-~p~~lG~e~~G~V~~vG~~v~-~~ 85 (357)
++|++....+++++++++.|.| .++||+||+.++++|++|+..+.+...... .|.++|+|++|+|+++|++++ .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 3556555555666776666655 999999999999999999988764332222 367899999999999999998 89
Q ss_pred CCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCc----ceEECCCCCCccccccc
Q 018382 86 KVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQK----FVVKIPDGMALEQAAPL 161 (357)
Q Consensus 86 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~----~~~~lP~~l~~~~aa~~ 161 (357)
++||+|+...... ....|+|++|++++.. .++++|+++++++++.+
T Consensus 82 ~~Gd~V~~~~~~~------------------------------~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~ 131 (352)
T cd08247 82 KVGDEVCGIYPHP------------------------------YGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAW 131 (352)
T ss_pred CCCCEEEEeecCC------------------------------CCCCceeeEEEEEccccccceeEECCCCCCHHHHHHh
Confidence 9999997542110 1146899999999987 78999999999999999
Q ss_pred cchhhhhhhhhhccC-CCCCCCeEEEEec-ChHHHHHHHHHHHc-CC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChh-
Q 018382 162 LCAGVTVFSPLSHFG-LKQSGLRGGILGL-GGVGHMGVLIAKAM-GH-HVTVISSSDKKRVEAMEHLGADQYLVSSDAT- 236 (357)
Q Consensus 162 ~~~~~ta~~~l~~~~-~~~~~~~VlI~G~-g~~G~~ai~la~~~-g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~- 236 (357)
+..+.|||+++.... .+++|++|+|+|+ |.+|++++|+|+.. +. .|+.+.+ +++.+.+++ +|++++++.++.+
T Consensus 132 ~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~-~g~~~~i~~~~~~~ 209 (352)
T cd08247 132 PLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKK-LGADHFIDYDAHSG 209 (352)
T ss_pred HHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHH-hCCCEEEecCCCcc
Confidence 999999999998887 6799999999987 89999999999987 55 5666654 555556655 9999988876543
Q ss_pred --H----HHHhh--CCccEEEEcCCCCCChHHHHhccc---cCCeEEEEccCCCC-cc-----------cchH----HHh
Q 018382 237 --R----MQEAA--DSLDYIIDTVPANHPLEPYLSLLK---LDGKLILTGVINTP-MQ-----------FLTP----MVM 289 (357)
Q Consensus 237 --~----~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~---~~G~~v~~g~~~~~-~~-----------~~~~----~~~ 289 (357)
. ++... +++|++|||+|+......++++++ ++|+++.++..... .. .... ...
T Consensus 210 ~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (352)
T cd08247 210 VKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLG 289 (352)
T ss_pred cchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhc
Confidence 2 22223 379999999998447788899999 99999987432210 00 0001 111
Q ss_pred hccceEEEEee-cCHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 290 LGRKAITGSFI-GSMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 290 ~~~~~i~g~~~-~~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
.+...+..... ...+.++.+++++.++.+++.+ ++|+++++++|++.+++++..||+++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 290 LWSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred CCCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 22223322221 1125678899999999998766 8999999999999999999899999864
No 112
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.1e-33 Score=254.39 Aligned_cols=305 Identities=24% Similarity=0.315 Sum_probs=244.3
Q ss_pred eeeehccCC--CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCC
Q 018382 10 TIGWAAKDP--SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFK 86 (357)
Q Consensus 10 ~~~~~~~~~--~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~ 86 (357)
|++++.... ++.+.+++.+.|.+.+++|+|++.++++|++|+.+..+... ....|.++|+|++|+|+.+|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 356665433 33477778888889999999999999999999998877643 223477899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhh
Q 018382 87 VGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGV 166 (357)
Q Consensus 87 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ 166 (357)
+||+|+.... + . ....|++++|+.++...++++|+++++.+++.++..+.
T Consensus 81 ~Gd~V~~~~~------------~----------------~--~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~ 130 (326)
T cd08272 81 VGDEVYGCAG------------G----------------L--GGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGI 130 (326)
T ss_pred CCCEEEEccC------------C----------------c--CCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHH
Confidence 9999975310 0 0 01478999999999999999999999999999999999
Q ss_pred hhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh--hHHHHhhC
Q 018382 167 TVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA--TRMQEAAD 243 (357)
Q Consensus 167 ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~~~~ 243 (357)
+||+++.....++++++++|+|+ |.+|++++++++..|++|++++++ ++.+.+.+ +|.+.+++.... +.+.....
T Consensus 131 ~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 208 (326)
T cd08272 131 TAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARS-LGADPIIYYRETVVEYVAEHTG 208 (326)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHH-cCCCEEEecchhHHHHHHHhcC
Confidence 99999877777799999999985 999999999999999999999988 88888866 999888876654 12222322
Q ss_pred --CccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecC-----------HHHHHHHH
Q 018382 244 --SLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGS-----------MKETKEML 310 (357)
Q Consensus 244 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~ 310 (357)
++|.++|+.++. ....++++++++|+++.++... .. .......++.++.+..... .+.+..++
T Consensus 209 ~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (326)
T cd08272 209 GRGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA-TH--DLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAA 284 (326)
T ss_pred CCCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC-cc--chhhHhhhcceEEEEEcccccccccchhhHHHHHHHHH
Confidence 699999999987 7888999999999999987653 21 2222235666766665332 24567788
Q ss_pred HHHHhcCCCccE--EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 311 EFCREKGVTSMI--EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 311 ~~~~~~~l~~~i--~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
+++.++.+.+.+ +.|++++++++++.+.+++..||+++++
T Consensus 285 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 285 RLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred HHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 888899887753 8999999999999999888889999864
No 113
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=4.8e-33 Score=248.86 Aligned_cols=265 Identities=32% Similarity=0.478 Sum_probs=223.3
Q ss_pred cEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCccccc
Q 018382 36 DVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYC 114 (357)
Q Consensus 36 evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~ 114 (357)
||+|++.++++|+.|++.+.|..+ ....|.++|+|++|+|+++|++++.|++||+|+..+.. .|+.|..|.. .|
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~----~~ 75 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNL-GCGTCELCRE----LC 75 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCC-CCCCCHHHHh----hC
Confidence 689999999999999999988765 34557889999999999999999999999999776554 6899999987 66
Q ss_pred ccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHH
Q 018382 115 NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGH 194 (357)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~ 194 (357)
....+. +....|++++|+.++.+.++++|+++++++++.++..+.+||+++.....++++++|||+|+|++|+
T Consensus 76 ~~~~~~-------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~ 148 (271)
T cd05188 76 PGGGIL-------GEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGL 148 (271)
T ss_pred CCCCEe-------ccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence 655432 3346899999999999999999999999999999999999999999888888999999999866999
Q ss_pred HHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh----hCCccEEEEcCCCCCChHHHHhccccCCe
Q 018382 195 MGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA----ADSLDYIIDTVPANHPLEPYLSLLKLDGK 270 (357)
Q Consensus 195 ~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~----~~~~d~v~d~~g~~~~~~~~~~~l~~~G~ 270 (357)
+++++++..|.+|+++++++++.+.+++ +|++++++..+.+....+ .+++|++|++++.......++++++++|+
T Consensus 149 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~ 227 (271)
T cd05188 149 LAAQLAKAAGARVIVTDRSDEKLELAKE-LGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227 (271)
T ss_pred HHHHHHHHcCCeEEEEcCCHHHHHHHHH-hCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence 9999999999999999999888888866 898888887765443332 24799999999983378889999999999
Q ss_pred EEEEccCCCCccc-chHHHhhccceEEEEeecCHHHHHHHHHHH
Q 018382 271 LILTGVINTPMQF-LTPMVMLGRKAITGSFIGSMKETKEMLEFC 313 (357)
Q Consensus 271 ~v~~g~~~~~~~~-~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 313 (357)
++.++........ .....+.++.++.++..+...+++.+++++
T Consensus 228 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (271)
T cd05188 228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDLL 271 (271)
T ss_pred EEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhhC
Confidence 9999876544332 244567899999999988888888877653
No 114
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.3e-33 Score=254.42 Aligned_cols=306 Identities=27% Similarity=0.370 Sum_probs=240.9
Q ss_pred eeeehccCCC--CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCC
Q 018382 10 TIGWAAKDPS--GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKV 87 (357)
Q Consensus 10 ~~~~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (357)
|+++.+.++. ..+.+.+++.|++.++||+||+.++++|++|+..+.+..+...+|.++|||++|+|+.+|+++..+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 4566665323 37889999999999999999999999999999988776543334678999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhh
Q 018382 88 GDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVT 167 (357)
Q Consensus 88 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t 167 (357)
||+|++... ....|++++|+.++...++++|+++++.+++.+++.+.+
T Consensus 81 Gd~V~~~~~--------------------------------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~ 128 (325)
T cd08271 81 GDRVAYHAS--------------------------------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLT 128 (325)
T ss_pred CCEEEeccC--------------------------------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHH
Confidence 999975421 124689999999999999999999999999999999999
Q ss_pred hhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHH---HHhh-
Q 018382 168 VFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM---QEAA- 242 (357)
Q Consensus 168 a~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~---~~~~- 242 (357)
|+.++.....+++|++|+|+|+ |++|++++++++..|++|+++. ++++.+.+.+ +|++.+++....... ....
T Consensus 129 a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~ 206 (325)
T cd08271 129 AYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVKS-LGADHVIDYNDEDVCERIKEITG 206 (325)
T ss_pred HHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHHH-cCCcEEecCCCccHHHHHHHHcC
Confidence 9999988777789999999997 8999999999999999999887 5667677755 999888877654333 2222
Q ss_pred -CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccch--HHHhhccceEEEEeecC--------HHHHHHHHH
Q 018382 243 -DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLT--PMVMLGRKAITGSFIGS--------MKETKEMLE 311 (357)
Q Consensus 243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~~~~~~~~i~g~~~~~--------~~~~~~~~~ 311 (357)
.++|++++++++. .....+++++++|+++.++.......... .....+...+....... .+.+.++++
T Consensus 207 ~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (325)
T cd08271 207 GRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLE 285 (325)
T ss_pred CCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHH
Confidence 2799999999987 66778999999999999865432211111 11122333333332211 133567888
Q ss_pred HHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 312 FCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 312 ~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
++.++.+.+.. +.|+++++.++++.+.+++..||+++++
T Consensus 286 ~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 286 LLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 89899887654 8999999999999999988889999864
No 115
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=4.9e-32 Score=248.60 Aligned_cols=295 Identities=27% Similarity=0.346 Sum_probs=243.4
Q ss_pred CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcccc
Q 018382 19 SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLV 97 (357)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (357)
+..+.+.+.+.|.+.+++++|++.++++|++|+....+.++. ..+|.++|||++|+|+.+|+++.+|++||+|+..
T Consensus 12 ~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~--- 88 (325)
T TIGR02824 12 PEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCAL--- 88 (325)
T ss_pred cccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEc---
Confidence 444666677777789999999999999999999988775542 2346789999999999999999999999999643
Q ss_pred CCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCC
Q 018382 98 GCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL 177 (357)
Q Consensus 98 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~ 177 (357)
..+|++++|+.++...++++|+++++.++++++..+.++|.++.....
T Consensus 89 --------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~ 136 (325)
T TIGR02824 89 --------------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGG 136 (325)
T ss_pred --------------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcC
Confidence 135899999999999999999999999999999999999999877777
Q ss_pred CCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh---h--CCccEEEEc
Q 018382 178 KQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA---A--DSLDYIIDT 251 (357)
Q Consensus 178 ~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~--~~~d~v~d~ 251 (357)
++++++|+|+|+ |++|.+++++++..|++|+++++++++.+.+.+ +|.+.+++....+....+ . .++|+++++
T Consensus 137 ~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 215 (325)
T TIGR02824 137 LKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEA-LGADIAINYREEDFVEVVKAETGGKGVDVILDI 215 (325)
T ss_pred CCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEecCchhHHHHHHHHcCCCCeEEEEEC
Confidence 899999999986 999999999999999999999999888887755 998888776654433332 2 269999999
Q ss_pred CCCCCChHHHHhccccCCeEEEEccCCC-CcccchHHHhhccceEEEEeecCH----------HHHHHHHHHHHhcCCCc
Q 018382 252 VPANHPLEPYLSLLKLDGKLILTGVINT-PMQFLTPMVMLGRKAITGSFIGSM----------KETKEMLEFCREKGVTS 320 (357)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~~~~~~~l~~ 320 (357)
+++. ....++++++++|+++.++.... ...++...++.++.++.+...... +.+.+++++++++.+.+
T Consensus 216 ~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 294 (325)
T TIGR02824 216 VGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRP 294 (325)
T ss_pred CchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccC
Confidence 9986 78889999999999999986432 123444555578888888775431 23456778888888877
Q ss_pred cE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 321 MI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 321 ~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
.. +.|++++++++++.+.+++..||+++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 295 VIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 55 8999999999999999988889999864
No 116
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.5e-32 Score=248.09 Aligned_cols=299 Identities=23% Similarity=0.304 Sum_probs=241.8
Q ss_pred CCCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcccc
Q 018382 19 SGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLV 97 (357)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (357)
+..+++.+.+.|.+.+++++|++.++++|+.|+.+..+..+ ...+|.++|||++|+|+.+|+++.+|++||+|+..+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~ 91 (328)
T cd08268 12 PEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAA 91 (328)
T ss_pred cceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEecccc
Confidence 34566778888889999999999999999999988776543 22446789999999999999999999999999754210
Q ss_pred CCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCC
Q 018382 98 GCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL 177 (357)
Q Consensus 98 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~ 177 (357)
.....|++++|+.++.+.++++|+++++++++.+++.+.++|.++.....
T Consensus 92 ------------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~ 141 (328)
T cd08268 92 ------------------------------DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAG 141 (328)
T ss_pred ------------------------------ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcC
Confidence 12356899999999999999999999999999999999999999887777
Q ss_pred CCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---HhhC--CccEEEEc
Q 018382 178 KQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAAD--SLDYIIDT 251 (357)
Q Consensus 178 ~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~~--~~d~v~d~ 251 (357)
+.++++++|+|+ |.+|++++++++..|++|+++++++++.+.+.+ +|.+.+++.+...... .... ++|+++++
T Consensus 142 ~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (328)
T cd08268 142 LRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLA-LGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDP 220 (328)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCCEEEecCCccHHHHHHHHhCCCCceEEEEC
Confidence 789999999987 999999999999999999999999888888866 8988888776543322 2222 69999999
Q ss_pred CCCCCChHHHHhccccCCeEEEEccCCCC-cccchHHHhhccceEEEEeecC----HHH----HHHHHHHHHhcCCCccE
Q 018382 252 VPANHPLEPYLSLLKLDGKLILTGVINTP-MQFLTPMVMLGRKAITGSFIGS----MKE----TKEMLEFCREKGVTSMI 322 (357)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~----~~~----~~~~~~~~~~~~l~~~i 322 (357)
.++. ....++++++++|+++.++..... ..++....+.++.++.+..... ... +..+.+++.++.+.+..
T Consensus 221 ~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (328)
T cd08268 221 VGGP-QFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVV 299 (328)
T ss_pred CchH-hHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCc
Confidence 9996 788899999999999999765432 2233333466777777765432 222 34455566777777655
Q ss_pred -EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 323 -EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 323 -~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
+.|++++++++++++++++..||++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 300 DRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred ccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 899999999999999998888999876
No 117
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=3.5e-32 Score=247.81 Aligned_cols=289 Identities=28% Similarity=0.364 Sum_probs=236.1
Q ss_pred CcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcccc
Q 018382 21 ILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLV 97 (357)
Q Consensus 21 ~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (357)
.+.+++.+.|+++++||+||+.++++|+.|+..+.|... ....|..+|||++|+|+.+|++++++++||+|+.....
T Consensus 14 ~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~ 93 (309)
T cd05289 14 VLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPF 93 (309)
T ss_pred ceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccCC
Confidence 355677788889999999999999999999998877542 33457889999999999999999999999999754210
Q ss_pred CCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCC
Q 018382 98 GCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL 177 (357)
Q Consensus 98 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~ 177 (357)
...|++++|+.++...++++|+++++..++.+++.+.+++.++.....
T Consensus 94 --------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~ 141 (309)
T cd05289 94 --------------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGG 141 (309)
T ss_pred --------------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcC
Confidence 136899999999999999999999999999999999999999988887
Q ss_pred CCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHh-hCCccEEEEcCCCC
Q 018382 178 KQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEA-ADSLDYIIDTVPAN 255 (357)
Q Consensus 178 ~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-~~~~d~v~d~~g~~ 255 (357)
+.++++|+|+|+ |.+|++++++++..|++|+++++++ +.+.+.+ +|.+++++....+..+.. ..++|++|+++++.
T Consensus 142 ~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~ 219 (309)
T cd05289 142 LKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLRS-LGADEVIDYTKGDFERAAAPGGVDAVLDTVGGE 219 (309)
T ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHHH-cCCCEEEeCCCCchhhccCCCCceEEEECCchH
Confidence 799999999997 9999999999999999999998877 7777755 998888876654433211 23799999999988
Q ss_pred CChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecC-HHHHHHHHHHHHhcCCCccE-EEeecccHHHH
Q 018382 256 HPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGS-MKETKEMLEFCREKGVTSMI-EVIKMDYVNKA 333 (357)
Q Consensus 256 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a 333 (357)
....++++++++|+++.++....... ....++.++....... .+.+..++++++++.+.+.+ +.|+++++++|
T Consensus 220 -~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 294 (309)
T cd05289 220 -TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFPLEDAAEA 294 (309)
T ss_pred -HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEeeccEEcHHHHHHH
Confidence 88899999999999999986543211 2223444444443321 56788899999999887766 89999999999
Q ss_pred HHHHHcCCccEEEEE
Q 018382 334 FERLEKNDVRYRFVV 348 (357)
Q Consensus 334 ~~~~~~~~~~Gkvvi 348 (357)
++.+.+++..+|+++
T Consensus 295 ~~~~~~~~~~~kvv~ 309 (309)
T cd05289 295 HERLESGHARGKVVL 309 (309)
T ss_pred HHHHHhCCCCCcEeC
Confidence 999998888888764
No 118
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.4e-32 Score=247.49 Aligned_cols=298 Identities=27% Similarity=0.346 Sum_probs=232.1
Q ss_pred cCCCCCc--ceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC---CCCCCCccCccccEEEEEeCCCCCCCCCCCE
Q 018382 16 KDPSGIL--SPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG---MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDK 90 (357)
Q Consensus 16 ~~~~~~~--~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (357)
.+++..+ .+.+.+.|++.++||+|++.++++|++|++.+.|..+ ....+..+|+|++|+|+++|+++++|.+||+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~ 85 (319)
T cd08267 6 YGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDE 85 (319)
T ss_pred CCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCE
Confidence 3344444 6778899999999999999999999999999877652 1234668999999999999999999999999
Q ss_pred EEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhh
Q 018382 91 VGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFS 170 (357)
Q Consensus 91 V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~ 170 (357)
|+.... ....|++++|+.++.+.++++|+++++++++.+++.+.+||+
T Consensus 86 V~~~~~--------------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~ 133 (319)
T cd08267 86 VFGRLP--------------------------------PKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQ 133 (319)
T ss_pred EEEecc--------------------------------CCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHH
Confidence 965421 013689999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh--CCccE
Q 018382 171 PLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA--DSLDY 247 (357)
Q Consensus 171 ~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~--~~~d~ 247 (357)
++.....++++++|+|+|+ |++|++++++++..|++|++++++ ++.+.+.+ +|.+++++.+..+...... +++|+
T Consensus 134 ~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~d~ 211 (319)
T cd08267 134 ALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVRS-LGADEVIDYTTEDFVALTAGGEKYDV 211 (319)
T ss_pred HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHHH-cCCCEeecCCCCCcchhccCCCCCcE
Confidence 9988887799999999997 999999999999999999998875 67677755 9998888766543322222 37999
Q ss_pred EEEcCCCC-CChHHHHhccccCCeEEEEccCCCCcccc-----hHHHh-hccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382 248 IIDTVPAN-HPLEPYLSLLKLDGKLILTGVINTPMQFL-----TPMVM-LGRKAITGSFIGSMKETKEMLEFCREKGVTS 320 (357)
Q Consensus 248 v~d~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~ 320 (357)
+++|+++. ......+..++++|+++.+|......... ..... .+..... ......+.+.++++++.++.+.+
T Consensus 212 vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~ 290 (319)
T cd08267 212 IFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFF-LAKPNAEDLEQLAELVEEGKLKP 290 (319)
T ss_pred EEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEE-EecCCHHHHHHHHHHHHCCCeee
Confidence 99999853 12233444599999999998754322211 11111 1222221 12223677899999999999887
Q ss_pred cE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382 321 MI-EVIKMDYVNKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 321 ~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi 348 (357)
.+ +.|+++++++|++.+.+++..||+++
T Consensus 291 ~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 291 VIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred eeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 66 89999999999999998888888874
No 119
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=9.6e-32 Score=244.33 Aligned_cols=283 Identities=22% Similarity=0.317 Sum_probs=228.9
Q ss_pred cCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccc
Q 018382 29 LRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCE 107 (357)
Q Consensus 29 ~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~ 107 (357)
+|++.+++++||+.++++|+.|+..+.+.++ ...+|.++|+|++|+|+++|+++++|++||+|+...
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~------------ 69 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGT------------ 69 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEec------------
Confidence 5788999999999999999999999888654 235677899999999999999999999999997541
Q ss_pred cCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEE
Q 018382 108 ADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGIL 187 (357)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~ 187 (357)
....|+|++|+.++.+.++++|+++++++++.++..+.+||.++. ...++++++|+|+
T Consensus 70 ---------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~ 127 (303)
T cd08251 70 ---------------------GESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQ 127 (303)
T ss_pred ---------------------CCCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEe
Confidence 124689999999999999999999999999999999999999985 5566999999999
Q ss_pred ec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH---hh--CCccEEEEcCCCCCChHHH
Q 018382 188 GL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE---AA--DSLDYIIDTVPANHPLEPY 261 (357)
Q Consensus 188 G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~--~~~d~v~d~~g~~~~~~~~ 261 (357)
|+ |.+|++++|+++..|++|+++++++++.+.+++ +|++.+++....+..+. .. .++|+++|++++. .....
T Consensus 128 ~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~ 205 (303)
T cd08251 128 TATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQ-LGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQKG 205 (303)
T ss_pred cCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHHHH
Confidence 65 999999999999999999999999888888866 99999888765443333 32 3799999999876 78889
Q ss_pred HhccccCCeEEEEccCCCC--cccchHHHhhccceEEEEee-----cCH----HHHHHHHHHHHhcCCCccE-EEeeccc
Q 018382 262 LSLLKLDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFI-----GSM----KETKEMLEFCREKGVTSMI-EVIKMDY 329 (357)
Q Consensus 262 ~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~-----~~~----~~~~~~~~~~~~~~l~~~i-~~~~~~~ 329 (357)
+++++++|+++.++..... ..+.... +.++..+..... ... +.+.++++++.++.+++.. +.|++++
T Consensus 206 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 284 (303)
T cd08251 206 LNCLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDD 284 (303)
T ss_pred HHHhccCcEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHH
Confidence 9999999999998764321 1222222 222222222211 111 3467788889999888765 8999999
Q ss_pred HHHHHHHHHcCCccEEEEE
Q 018382 330 VNKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 330 ~~~a~~~~~~~~~~Gkvvi 348 (357)
++++++.+.+++..||+++
T Consensus 285 ~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 285 IGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHHHHHHHHhCCCcceEeC
Confidence 9999999999988898874
No 120
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=4e-31 Score=242.20 Aligned_cols=294 Identities=29% Similarity=0.426 Sum_probs=240.8
Q ss_pred CCCCcceeeeecCCCC-CCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018382 18 PSGILSPYTYTLRNTG-AEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGV 95 (357)
Q Consensus 18 ~~~~~~~~~~~~p~~~-~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 95 (357)
.+..+++.+.+ |.+. +++++|++.++++|++|+..+.|... ....|.++|+|++|+|+.+|+++.++++||+|+...
T Consensus 11 ~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~ 89 (323)
T cd08241 11 GPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALT 89 (323)
T ss_pred CcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec
Confidence 34456666676 6666 59999999999999999998877653 223466799999999999999999999999997531
Q ss_pred ccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhcc
Q 018382 96 LVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHF 175 (357)
Q Consensus 96 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~ 175 (357)
..|++++|+.++.+.++++|++++..+++.+...+.+||.++...
T Consensus 90 -----------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~ 134 (323)
T cd08241 90 -----------------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRR 134 (323)
T ss_pred -----------------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHh
Confidence 268899999999999999999999999999999999999998776
Q ss_pred CCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hhh--CCccEEE
Q 018382 176 GLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAA--DSLDYII 249 (357)
Q Consensus 176 ~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~--~~~d~v~ 249 (357)
..++++++|+|+|+ |++|++++++++..|++|+++++++++.+.+.+ +|++.+++....+..+ ... .++|.++
T Consensus 135 ~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 213 (323)
T cd08241 135 ARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARA-LGADHVIDYRDPDLRERVKALTGGRGVDVVY 213 (323)
T ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHH-cCCceeeecCCccHHHHHHHHcCCCCcEEEE
Confidence 77789999999997 999999999999999999999999888888877 8988888766543333 232 2699999
Q ss_pred EcCCCCCChHHHHhccccCCeEEEEccCCCCcc-cchHHHhhccceEEEEeecCH---------HHHHHHHHHHHhcCCC
Q 018382 250 DTVPANHPLEPYLSLLKLDGKLILTGVINTPMQ-FLTPMVMLGRKAITGSFIGSM---------KETKEMLEFCREKGVT 319 (357)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~g~~~~~~---------~~~~~~~~~~~~~~l~ 319 (357)
+++|.. ....++++++++|+++.++....... +.....+.++.++.+...... +.+..+++++.++.+.
T Consensus 214 ~~~g~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (323)
T cd08241 214 DPVGGD-VFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIR 292 (323)
T ss_pred ECccHH-HHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcc
Confidence 999986 78889999999999999886543322 333344567888887765321 4567788899999887
Q ss_pred ccE-EEeecccHHHHHHHHHcCCccEEEEEe
Q 018382 320 SMI-EVIKMDYVNKAFERLEKNDVRYRFVVD 349 (357)
Q Consensus 320 ~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~ 349 (357)
+.. +.|+++++.++++++.+++..||++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 293 PHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred cccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 766 899999999999999988888898863
No 121
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.6e-30 Score=240.14 Aligned_cols=293 Identities=24% Similarity=0.348 Sum_probs=234.8
Q ss_pred CCcceeeeecCCCCCCcEEEEEeeeccccchHHHHhcCCC-CCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccC
Q 018382 20 GILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLG-MSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVG 98 (357)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlV~v~~~~~~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 98 (357)
..+.+.+.+.|+|.++||+||+.++++|++|+.+..|..+ ....|.++|+|++|+|+.+|+++.+|++||+|+..
T Consensus 12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~---- 87 (337)
T cd08275 12 DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGL---- 87 (337)
T ss_pred cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEe----
Confidence 4577777788889999999999999999999998887654 23457789999999999999999999999999753
Q ss_pred CCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCC
Q 018382 99 CCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLK 178 (357)
Q Consensus 99 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~ 178 (357)
...|+|++|+.++.+.++++|+++++++++.+++.+.++|.++.....+
T Consensus 88 -------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 136 (337)
T cd08275 88 -------------------------------TRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNL 136 (337)
T ss_pred -------------------------------cCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCC
Confidence 1358999999999999999999999999999999999999998877777
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---Hh-hCCccEEEEcC
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EA-ADSLDYIIDTV 252 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~-~~~~d~v~d~~ 252 (357)
+++++|+|+|+ |.+|++++++|+.. +..++.. ..+++.+.+.+ +|++.+++.+..+... .. .+++|+++|+.
T Consensus 137 ~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~ 214 (337)
T cd08275 137 RPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGT-ASASKHEALKE-NGVTHVIDYRTQDYVEEVKKISPEGVDIVLDAL 214 (337)
T ss_pred CCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEe-CCHHHHHHHHH-cCCcEEeeCCCCcHHHHHHHHhCCCceEEEECC
Confidence 99999999997 99999999999998 3333222 23446667755 9998888776543322 22 24799999999
Q ss_pred CCCCChHHHHhccccCCeEEEEccCCCC--cc---------------cchHHHhhccceEEEEeecCH--------HHHH
Q 018382 253 PANHPLEPYLSLLKLDGKLILTGVINTP--MQ---------------FLTPMVMLGRKAITGSFIGSM--------KETK 307 (357)
Q Consensus 253 g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~---------------~~~~~~~~~~~~i~g~~~~~~--------~~~~ 307 (357)
|+. ....++++++++|+++.+|..... .. ......+.++.++.++..... ..+.
T Consensus 215 g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (337)
T cd08275 215 GGE-DTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMD 293 (337)
T ss_pred cHH-HHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHH
Confidence 987 788899999999999999865321 11 111344677778777754211 2356
Q ss_pred HHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEEec
Q 018382 308 EMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDV 350 (357)
Q Consensus 308 ~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~ 350 (357)
++++++.++.+.+.. +.|++++++++++.+.+++..||+++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 294 KLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 788888999888766 8999999999999999988889999864
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.98 E-value=1.6e-30 Score=234.46 Aligned_cols=273 Identities=25% Similarity=0.314 Sum_probs=224.9
Q ss_pred CcEEEEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCccccc
Q 018382 35 EDVYIKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYC 114 (357)
Q Consensus 35 ~evlV~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~ 114 (357)
+||+||+.++++|++|++...|..+ .+|.++|+|++|+|+++|++++.|++||+|+..
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~-------------------- 58 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL-------------------- 58 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC--CCCCccceeeeEEEEeecCCccCCCCCCEEEEE--------------------
Confidence 5899999999999999999987653 457789999999999999999999999999753
Q ss_pred ccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHH
Q 018382 115 NKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVG 193 (357)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G 193 (357)
..|+|++|+.++.+.++++|+++++.+++.+++.+.++|.++.....+++|++|+|+|+ |++|
T Consensus 59 ----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g 122 (293)
T cd05195 59 ----------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVG 122 (293)
T ss_pred ----------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHH
Confidence 36899999999999999999999999999999999999999877777799999999975 9999
Q ss_pred HHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC--CcEEEcCCChhHHHH---hh--CCccEEEEcCCCCCChHHHHhccc
Q 018382 194 HMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG--ADQYLVSSDATRMQE---AA--DSLDYIIDTVPANHPLEPYLSLLK 266 (357)
Q Consensus 194 ~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g--~~~vv~~~~~~~~~~---~~--~~~d~v~d~~g~~~~~~~~~~~l~ 266 (357)
++++|+++..|++|+++++++++.+.+++ .| ++++++....+..++ .. .++|++++++++. .+..++++++
T Consensus 123 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~ 200 (293)
T cd05195 123 QAAIQLAQHLGAEVFATVGSEEKREFLRE-LGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLA 200 (293)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHHHH-hCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcc
Confidence 99999999999999999999888888877 66 678887766444333 22 2799999999988 8999999999
Q ss_pred cCCeEEEEccCCCC--cccchHHHhhccceEEEEeecC---------HHHHHHHHHHHHhcCCCccE-EEeecccHHHHH
Q 018382 267 LDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFIGS---------MKETKEMLEFCREKGVTSMI-EVIKMDYVNKAF 334 (357)
Q Consensus 267 ~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~---------~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~ 334 (357)
++|+++.++..... ..+.... +.++..+....... .+.+..+++++.++.+.+.+ +.++++++.+++
T Consensus 201 ~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 279 (293)
T cd05195 201 PFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAF 279 (293)
T ss_pred cCceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHH
Confidence 99999998865432 1222222 23444544433211 13567888899999988766 789999999999
Q ss_pred HHHHcCCccEEEEE
Q 018382 335 ERLEKNDVRYRFVV 348 (357)
Q Consensus 335 ~~~~~~~~~Gkvvi 348 (357)
+.+.+++..||+++
T Consensus 280 ~~~~~~~~~~~ivv 293 (293)
T cd05195 280 RLMQSGKHIGKVVL 293 (293)
T ss_pred HHHhcCCCCceecC
Confidence 99999888888764
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=8.5e-30 Score=229.48 Aligned_cols=268 Identities=25% Similarity=0.316 Sum_probs=218.4
Q ss_pred EEEeeeccccchHHHHhcCCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCccccccccc
Q 018382 39 IKVLYCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKI 118 (357)
Q Consensus 39 V~v~~~~~~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~ 118 (357)
||+.++++|++|++...|.++ .|.++|+|++|+|+++|++++.|++||+|+..
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~------------------------ 54 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL------------------------ 54 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE------------------------
Confidence 789999999999999887653 35689999999999999999999999999643
Q ss_pred ccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHH
Q 018382 119 WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGV 197 (357)
Q Consensus 119 ~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai 197 (357)
..|+|++|+.++.+.++++|+++++++++.+++.+.++|.++.....+.++++|+|+|+ |.+|++++
T Consensus 55 ------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~ 122 (288)
T smart00829 55 ------------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAI 122 (288)
T ss_pred ------------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHH
Confidence 35899999999999999999999999999999999999999867677789999999985 99999999
Q ss_pred HHHHHcCCeEEEEeCCcHHHHHHHHhcCC--cEEEcCCChhHHHHh---h--CCccEEEEcCCCCCChHHHHhccccCCe
Q 018382 198 LIAKAMGHHVTVISSSDKKRVEAMEHLGA--DQYLVSSDATRMQEA---A--DSLDYIIDTVPANHPLEPYLSLLKLDGK 270 (357)
Q Consensus 198 ~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~---~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~ 270 (357)
++++..|++|+++++++++.+.+++ +|+ +++++.++.+..+.+ . .++|+++|++++. ....++++++++|+
T Consensus 123 ~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~ 200 (288)
T smart00829 123 QLAQHLGAEVFATAGSPEKRDFLRE-LGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGR 200 (288)
T ss_pred HHHHHcCCEEEEEeCCHHHHHHHHH-cCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcE
Confidence 9999999999999999999888866 997 778877665443332 2 2699999999975 78889999999999
Q ss_pred EEEEccCCC--CcccchHHHhhccceEEEEeec--------CHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHc
Q 018382 271 LILTGVINT--PMQFLTPMVMLGRKAITGSFIG--------SMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEK 339 (357)
Q Consensus 271 ~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~--------~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~ 339 (357)
++.++.... ...++... +.++.++.+.... ..+.+..+++++.++.+.+.. +.|++++++++++.+++
T Consensus 201 ~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (288)
T smart00829 201 FVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQ 279 (288)
T ss_pred EEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhc
Confidence 999986532 12222222 3445555444321 113467788888888887644 88999999999999999
Q ss_pred CCccEEEEE
Q 018382 340 NDVRYRFVV 348 (357)
Q Consensus 340 ~~~~Gkvvi 348 (357)
++..||+++
T Consensus 280 ~~~~~~ivv 288 (288)
T smart00829 280 GKHIGKVVL 288 (288)
T ss_pred CCCcceEeC
Confidence 887788764
No 124
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.96 E-value=1.4e-29 Score=246.26 Aligned_cols=286 Identities=21% Similarity=0.259 Sum_probs=236.1
Q ss_pred cceeeeecC---CCCCCcEEEEEeeeccccchHHHHhcCCCCCCCC-------CccCccccEEEEEeCCCCCCCCCCCEE
Q 018382 22 LSPYTYTLR---NTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYP-------MVPGHEVVGEVKEVGSEVSNFKVGDKV 91 (357)
Q Consensus 22 ~~~~~~~~p---~~~~~evlV~v~~~~~~~~D~~~~~g~~~~~~~p-------~~lG~e~~G~V~~vG~~v~~~~~Gd~V 91 (357)
++..|-+.. +..++.=+.-|-|+++|.+|++...|+.+....| ++||-|++|+- .-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------ASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------CCCcEE
Confidence 444444443 3467777889999999999999999988743333 67899999963 449999
Q ss_pred EEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcceEECCCCCCccccccccchhhhhhhh
Q 018382 92 GVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSP 171 (357)
Q Consensus 92 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~ 171 (357)
+.++ .--++++.+.++.+++|.+|.+.++++|+++|+.|.|||++
T Consensus 1499 M~mv-----------------------------------pAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYA 1543 (2376)
T KOG1202|consen 1499 MGMV-----------------------------------PAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYA 1543 (2376)
T ss_pred EEee-----------------------------------ehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhh
Confidence 8653 45678999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCeEEEE-ecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC---CcEEEcCCChhHHH---Hhh--
Q 018382 172 LSHFGLKQSGLRGGIL-GLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG---ADQYLVSSDATRMQ---EAA-- 242 (357)
Q Consensus 172 l~~~~~~~~~~~VlI~-G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g---~~~vv~~~~~~~~~---~~~-- 242 (357)
|...+..++|+++||| |+|++|++||.+|.+.|++|+.++.+.+|++++++.|+ ..++-|+++.++.. +-+
T Consensus 1544 LVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~G 1623 (2376)
T KOG1202|consen 1544 LVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKG 1623 (2376)
T ss_pred hhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcC
Confidence 9999999999999999 56999999999999999999999999999999998888 56777887755422 222
Q ss_pred CCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchH-HHhhccceEEEEeec-----CHHHHHHHHHHHHhc
Q 018382 243 DSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTP-MVMLGRKAITGSFIG-----SMKETKEMLEFCREK 316 (357)
Q Consensus 243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~g~~~~-----~~~~~~~~~~~~~~~ 316 (357)
+|+|+|+++...+ -+..+++||+.+|+|..+|-..-+...++. ..+.++.+++|.... ..++++++..++++|
T Consensus 1624 rGVdlVLNSLaeE-kLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eG 1702 (2376)
T KOG1202|consen 1624 RGVDLVLNSLAEE-KLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEG 1702 (2376)
T ss_pred CCeeeehhhhhHH-HHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhh
Confidence 3899999999988 889999999999999999865433333332 356799999998874 347788888888775
Q ss_pred ----CCCccE-EEeecccHHHHHHHHHcCCccEEEEEecCCC
Q 018382 317 ----GVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 353 (357)
Q Consensus 317 ----~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi~~~~~ 353 (357)
.++|.- ++|+-.++++||++|.++++.||||+++..+
T Consensus 1703 IksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1703 IKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred hccCceeccccccccHHHHHHHHHHHhccCccceEEEEEccc
Confidence 555655 8999999999999999999999999998543
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=7.3e-28 Score=216.57 Aligned_cols=243 Identities=28% Similarity=0.391 Sum_probs=194.8
Q ss_pred CCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEe
Q 018382 62 NYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVV 141 (357)
Q Consensus 62 ~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v 141 (357)
.+|.++|+|++|+|+++|+++++|++||+|+.. +.|++|+.+
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~--------------------------------------~~~~~~~~v 60 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF--------------------------------------GPHAERVVV 60 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec--------------------------------------CCcceEEEc
Confidence 478999999999999999999999999999642 358999999
Q ss_pred eCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHH
Q 018382 142 DQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSDKKRVEA 220 (357)
Q Consensus 142 ~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~ 220 (357)
+.+.++++|+++++++++.+ ..+.+||+++.. ..++++++++|+|+|.+|++++++|+..|++ |+++++++++.+.+
T Consensus 61 ~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~~-~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~ 138 (277)
T cd08255 61 PANLLVPLPDGLPPERAALT-ALAATALNGVRD-AEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELA 138 (277)
T ss_pred CHHHeeECcCCCCHHHhHHH-HHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHH
Confidence 99999999999999999988 789999999864 5569999999998899999999999999998 99999998888866
Q ss_pred HHhcC-CcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEe
Q 018382 221 MEHLG-ADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSF 299 (357)
Q Consensus 221 ~~~~g-~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~ 299 (357)
++ +| ++++++..... .-..++|++||+++........+++++++|+++.+|............+..+..++.+..
T Consensus 139 ~~-~g~~~~~~~~~~~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 214 (277)
T cd08255 139 EA-LGPADPVAADTADE---IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQ 214 (277)
T ss_pred HH-cCCCccccccchhh---hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeec
Confidence 66 89 56665443211 112379999999887657888999999999999998765431111223444555666655
Q ss_pred ecC------------HHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcC-CccEEEEE
Q 018382 300 IGS------------MKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKN-DVRYRFVV 348 (357)
Q Consensus 300 ~~~------------~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~-~~~Gkvvi 348 (357)
... .+.++++++++.++.+++.+ ++|+++++++|++.++++ ....|+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 215 VYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred ccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 421 14678899999999988766 899999999999999877 34467653
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=7.5e-25 Score=187.44 Aligned_cols=281 Identities=20% Similarity=0.195 Sum_probs=218.1
Q ss_pred CCCCCCcEEEEEeeeccccchHHHHhcCCCC-CCCCC-----ccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCC
Q 018382 30 RNTGAEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPM-----VPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNC 103 (357)
Q Consensus 30 p~~~~~evlV~v~~~~~~~~D~~~~~g~~~~-~~~p~-----~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~ 103 (357)
.++++++||||..|.+..|.-...++-..+. .-.|. +.| ..+|+|++ +...+|++||.|+..
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g-~GV~kVi~--S~~~~~~~GD~v~g~--------- 100 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDG-FGVAKVID--SGHPNYKKGDLVWGI--------- 100 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecC-CceEEEEe--cCCCCCCcCceEEEe---------
Confidence 4579999999999999988643322211111 11122 234 67899999 467789999999743
Q ss_pred cccccCcccccccccccCccccCCCCCCCCccceEEEeeCcce--EECC--CCCCccccc-cccchhhhhhhhhhccCCC
Q 018382 104 RPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFV--VKIP--DGMALEQAA-PLLCAGVTVFSPLSHFGLK 178 (357)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~--~~lP--~~l~~~~aa-~~~~~~~ta~~~l~~~~~~ 178 (357)
=+|.||.++++... +++| .++++.... ++..+.+|||..+++.+..
T Consensus 101 -----------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~p 151 (343)
T KOG1196|consen 101 -----------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSP 151 (343)
T ss_pred -----------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCC
Confidence 27899999977544 4443 344444333 5778899999999999988
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-hHHHHhh----CCccEEEEcC
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-TRMQEAA----DSLDYIIDTV 252 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~----~~~d~v~d~~ 252 (357)
++|++|+|-|| |++|+.+.|+|+..|++|+.++.++++...++.+||.+..+|+.++ +..+++. +++|+.||.+
T Consensus 152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNV 231 (343)
T KOG1196|consen 152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENV 231 (343)
T ss_pred CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEecc
Confidence 99999999987 9999999999999999999999999999999998999999999987 4444444 3899999999
Q ss_pred CCCCChHHHHhccccCCeEEEEccCCCC-----cc-cchHHHhhccceEEEEeecCH-----HHHHHHHHHHHhcCCCcc
Q 018382 253 PANHPLEPYLSLLKLDGKLILTGVINTP-----MQ-FLTPMVMLGRKAITGSFIGSM-----KETKEMLEFCREKGVTSM 321 (357)
Q Consensus 253 g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~-~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~~~~~~l~~~ 321 (357)
|+. .+...+..|+..|+++.+|..+.. .. .+....+.|++++.|+..... +.++.+..++++|+|+-.
T Consensus 232 GG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~ 310 (343)
T KOG1196|consen 232 GGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYV 310 (343)
T ss_pred CcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEe
Confidence 999 899999999999999999875421 11 234567889999988776433 345777788888988654
Q ss_pred EEE-eecccHHHHHHHHHcCCccEEEEEecCC
Q 018382 322 IEV-IKMDYVNKAFERLEKNDVRYRFVVDVAG 352 (357)
Q Consensus 322 i~~-~~~~~~~~a~~~~~~~~~~Gkvvi~~~~ 352 (357)
-++ -.|+..++||.-|-+++..||.++.+..
T Consensus 311 edi~~Glen~P~A~vglf~GkNvGKqiv~va~ 342 (343)
T KOG1196|consen 311 EDIADGLENGPSALVGLFHGKNVGKQLVKVAR 342 (343)
T ss_pred hhHHHHHhccHHHHHHHhccCcccceEEEeec
Confidence 433 3499999999999999999999998864
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.90 E-value=1.6e-23 Score=161.00 Aligned_cols=108 Identities=36% Similarity=0.630 Sum_probs=93.7
Q ss_pred CCcEEEEEeeeccccchHHHHhc-CCCCCCCCCccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCccc
Q 018382 34 AEDVYIKVLYCGICHTDIHQIKN-DLGMSNYPMVPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQ 112 (357)
Q Consensus 34 ~~evlV~v~~~~~~~~D~~~~~g-~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~ 112 (357)
|+|||||+.++++|++|+++++| ......+|.++|||++|+|+++|+++++|++||+|++.+... |+.|..|..+.++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~-~~~c~~c~~~~~~ 79 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIG-CGECEYCLSGRPN 79 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEE-TSSSHHHHTTTGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccC-ccCchhhcCCccc
Confidence 68999999999999999999999 345678899999999999999999999999999997766555 9999999999999
Q ss_pred ccccccccCccccCCCCCCCCccceEEEeeCcceEEC
Q 018382 113 YCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKI 149 (357)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~l 149 (357)
.|+..... |...+|+|+||+++++++++|+
T Consensus 80 ~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 80 LCPNPEVL-------GLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GTTTBEET-------TTSSTCSSBSEEEEEGGGEEEE
T ss_pred cCCCCCEe-------EcCCCCcccCeEEEehHHEEEC
Confidence 99876655 3347999999999999999875
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.71 E-value=1.1e-16 Score=127.07 Aligned_cols=124 Identities=33% Similarity=0.499 Sum_probs=110.0
Q ss_pred hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH---HhhC--CccEEEEcCCCCCChHHHHhcc
Q 018382 191 GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ---EAAD--SLDYIIDTVPANHPLEPYLSLL 265 (357)
Q Consensus 191 ~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~~--~~d~v~d~~g~~~~~~~~~~~l 265 (357)
++|++++|+|+..|++|+++++++++.+.+++ +|+++++++++.+..+ ++.+ ++|+||||+|....++.+++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~-~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKE-LGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-TTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHh-hcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 58999999999999999999999999999888 9999999998865444 4444 6999999999666899999999
Q ss_pred ccCCeEEEEccCC-CCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHh
Q 018382 266 KLDGKLILTGVIN-TPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCRE 315 (357)
Q Consensus 266 ~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 315 (357)
+++|+++.+|... ....++...++.+++++.+++.++.++++++++++.+
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 9999999999987 5567888899999999999999999999999998864
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.52 E-value=2.4e-14 Score=113.05 Aligned_cols=117 Identities=26% Similarity=0.345 Sum_probs=79.1
Q ss_pred cCCcEEEcCCChhHHHHhhCCccEEEEcCC--CCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeec
Q 018382 224 LGADQYLVSSDATRMQEAADSLDYIIDTVP--ANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIG 301 (357)
Q Consensus 224 ~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~ 301 (357)
+|+++++|+++.++ .-.+++|+|||++| ....+..++++| ++|+++.++. .........+...+.+....
T Consensus 1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~~~~~~~~~~ 72 (127)
T PF13602_consen 1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKGRSIRYSFLF 72 (127)
T ss_dssp CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHCHHCEEECCC
T ss_pred CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcccceEEEEEE
Confidence 68999999997666 33469999999999 443446777788 9999999874 11111111122233333322
Q ss_pred -------CHHHHHHHHHHHHhcCCCccE-EEeecccHHHHHHHHHcCCccEEEEE
Q 018382 302 -------SMKETKEMLEFCREKGVTSMI-EVIKMDYVNKAFERLEKNDVRYRFVV 348 (357)
Q Consensus 302 -------~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~Gkvvi 348 (357)
..+.++++.+++++|+|++++ ++|+++++.+|++.+++++..||+|+
T Consensus 73 ~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 73 SVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp -H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 234589999999999999999 89999999999999999999999986
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.47 E-value=7.5e-13 Score=123.14 Aligned_cols=174 Identities=12% Similarity=0.041 Sum_probs=135.5
Q ss_pred hhhhhhcc-CCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCcc
Q 018382 168 VFSPLSHF-GLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLD 246 (357)
Q Consensus 168 a~~~l~~~-~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d 246 (357)
.|.++.+. +..-+|++|+|+|+|.+|+.+++.++..|++|+++..++.+...+.+ +|++.+ +. ++...++|
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-~G~~~~-~~------~e~v~~aD 259 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQAAM-EGYEVM-TM------EEAVKEGD 259 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-cCCEEc-cH------HHHHcCCC
Confidence 34444443 44468999999999999999999999999999999998888888877 898543 21 23335789
Q ss_pred EEEEcCCCCCChHHH-HhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHH-HHH--HHHHHHHhcCC---C
Q 018382 247 YIIDTVPANHPLEPY-LSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMK-ETK--EMLEFCREKGV---T 319 (357)
Q Consensus 247 ~v~d~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-~~~--~~~~~~~~~~l---~ 319 (357)
+||+++|....+... ++.++++|+++.+|.. ...++...+..+.+++.++..+..+ .|+ ..+.++.+|.+ .
T Consensus 260 VVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~ 337 (413)
T cd00401 260 IFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLG 337 (413)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCc
Confidence 999999988667765 9999999999999854 3557777788888999998876543 455 78999999988 2
Q ss_pred ccE-EE-----eecc-cHHHHHHHHHcCCcc-EEEEEecC
Q 018382 320 SMI-EV-----IKMD-YVNKAFERLEKNDVR-YRFVVDVA 351 (357)
Q Consensus 320 ~~i-~~-----~~~~-~~~~a~~~~~~~~~~-Gkvvi~~~ 351 (357)
+.+ |. |+|+ |+.++++.+.++... -|+++.+.
T Consensus 338 ~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 338 CATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred ccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 334 66 8899 999999999876543 46666553
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.34 E-value=3.3e-11 Score=114.99 Aligned_cols=141 Identities=14% Similarity=0.095 Sum_probs=108.7
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCCh-------------hHHH----H
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDA-------------TRMQ----E 240 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~-------------~~~~----~ 240 (357)
.++++|+|+|+|++|+++++.|+.+|++|++++.++++++.+++ +|++.+ +|..+. +..+ .
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 68999999999999999999999999999999999999998888 999854 554321 1111 1
Q ss_pred hh---CCccEEEEcCCCCC-----C-hHHHHhccccCCeEEEEccCC-CC--cccchHHHhh-ccceEEEEeecCHHHHH
Q 018382 241 AA---DSLDYIIDTVPANH-----P-LEPYLSLLKLDGKLILTGVIN-TP--MQFLTPMVML-GRKAITGSFIGSMKETK 307 (357)
Q Consensus 241 ~~---~~~d~v~d~~g~~~-----~-~~~~~~~l~~~G~~v~~g~~~-~~--~~~~~~~~~~-~~~~i~g~~~~~~~~~~ 307 (357)
+. +++|+||+|++.+. . .+..++.++++|++++++... +. ...+...++. +++++.|.+....+...
T Consensus 242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p~ 321 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLPT 321 (509)
T ss_pred HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHHH
Confidence 11 47999999998632 4 489999999999999998853 32 3333344554 89999998876645555
Q ss_pred HHHHHHHhcCCCc
Q 018382 308 EMLEFCREKGVTS 320 (357)
Q Consensus 308 ~~~~~~~~~~l~~ 320 (357)
++.+++.++.+..
T Consensus 322 ~As~lla~~~i~l 334 (509)
T PRK09424 322 QSSQLYGTNLVNL 334 (509)
T ss_pred HHHHHHHhCCccH
Confidence 7899999987753
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.64 E-value=2.8e-07 Score=82.58 Aligned_cols=164 Identities=15% Similarity=0.190 Sum_probs=100.1
Q ss_pred CCCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHh---cCCcEEEcCCChhHHHHh---hCCccEEE
Q 018382 178 KQSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEH---LGADQYLVSSDATRMQEA---ADSLDYII 249 (357)
Q Consensus 178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~~~---~~~~d~v~ 249 (357)
++++++||.+|+|. |..++++++..+. +|++++.+++..+.+++. .|.+.+ .....+ +..+ .+.+|+|+
T Consensus 75 ~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~d-~~~l~~~~~~fD~Vi 151 (272)
T PRK11873 75 LKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLGE-IEALPVADNSVDVII 151 (272)
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEcc-hhhCCCCCCceeEEE
Confidence 48999999999977 8888888887775 699999998887777652 343222 111111 2222 23799998
Q ss_pred EcCC------CCCChHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc---
Q 018382 250 DTVP------ANHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS--- 320 (357)
Q Consensus 250 d~~g------~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--- 320 (357)
.... ....++.+.+.|+|+|+++..+..... ..+ ..+.+...+.+..........++.+++++..+..
T Consensus 152 ~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~i 228 (272)
T PRK11873 152 SNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-ELP--EEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDITI 228 (272)
T ss_pred EcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CCC--HHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceEE
Confidence 5431 123578899999999999987654322 111 1111222222221222234556667777754443
Q ss_pred cE-EEeecccHHHHHHHH--HcCCccEEEE
Q 018382 321 MI-EVIKMDYVNKAFERL--EKNDVRYRFV 347 (357)
Q Consensus 321 ~i-~~~~~~~~~~a~~~~--~~~~~~Gkvv 347 (357)
.. +.++++++.++++.+ .+++..++.+
T Consensus 229 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 229 QPKREYRIPDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred EeccceecccHHHHHHHhccccccccCceE
Confidence 23 578899999999988 5555445444
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.62 E-value=7.4e-07 Score=85.24 Aligned_cols=100 Identities=16% Similarity=0.179 Sum_probs=78.0
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCC-------------hhH-------
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSD-------------ATR------- 237 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~-------------~~~------- 237 (357)
.++.+|+|+|+|.+|+++++.++.+|++|++.+.++++++.+++ +|++.+ ++..+ .+.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 46789999999999999999999999999999999999888888 998763 33211 111
Q ss_pred HHHhhCCccEEEEcC---CCCC---ChHHHHhccccCCeEEEEccCCC
Q 018382 238 MQEAADSLDYIIDTV---PANH---PLEPYLSLLKLDGKLILTGVINT 279 (357)
Q Consensus 238 ~~~~~~~~d~v~d~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~~ 279 (357)
..+...++|++|+|+ |... ..+...+.|++++.+++++...+
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G 288 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG 288 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC
Confidence 122234799999999 6532 45778999999999999976543
No 134
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.58 E-value=3.1e-06 Score=76.47 Aligned_cols=111 Identities=21% Similarity=0.200 Sum_probs=84.0
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChH
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLE 259 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 259 (357)
.+++|+|+|.|.+|+.+++.++.+|++|++..++.++.+++.+ +|.+.+ . .+.+.+....+|+||++++.....+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~~-~---~~~l~~~l~~aDiVI~t~p~~~i~~ 225 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSPF-H---LSELAEEVGKIDIIFNTIPALVLTK 225 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCeee-c---HHHHHHHhCCCCEEEECCChhhhhH
Confidence 6899999999999999999999999999999999888777766 886543 2 1233445568999999987653445
Q ss_pred HHHhccccCCeEEEEccCCCCcccchHHHhhccceEEE
Q 018382 260 PYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITG 297 (357)
Q Consensus 260 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g 297 (357)
..++.+++++.+++++...+.+.+. ..-.+..+..+
T Consensus 226 ~~l~~~~~g~vIIDla~~pggtd~~--~a~~~Gv~~~~ 261 (296)
T PRK08306 226 EVLSKMPPEALIIDLASKPGGTDFE--YAEKRGIKALL 261 (296)
T ss_pred HHHHcCCCCcEEEEEccCCCCcCee--ehhhCCeEEEE
Confidence 6778899999999998877666653 22234444443
No 135
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.53 E-value=1.2e-06 Score=82.24 Aligned_cols=106 Identities=17% Similarity=0.164 Sum_probs=82.3
Q ss_pred hhhhhhhhccCCC-CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCC
Q 018382 166 VTVFSPLSHFGLK-QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADS 244 (357)
Q Consensus 166 ~ta~~~l~~~~~~-~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~ 244 (357)
..+|.++..+..+ -+|++|+|+|.|.+|..+++.++.+|++|+++.+++.+...+.. .|.. +.+ +++...+
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-~G~~-v~~------l~eal~~ 267 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-DGFR-VMT------MEEAAEL 267 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-cCCE-ecC------HHHHHhC
Confidence 4456666666333 48999999999999999999999999999999988877666655 6754 222 2334458
Q ss_pred ccEEEEcCCCCCChH-HHHhccccCCeEEEEccCCC
Q 018382 245 LDYIIDTVPANHPLE-PYLSLLKLDGKLILTGVINT 279 (357)
Q Consensus 245 ~d~v~d~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~ 279 (357)
+|+||+++|....+. ..++.+++++.++..|....
T Consensus 268 aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 268 GDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred CCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence 999999999875565 68899999999999987653
No 136
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.44 E-value=6e-06 Score=76.99 Aligned_cols=99 Identities=18% Similarity=0.204 Sum_probs=75.8
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcC---CC--
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTV---PA-- 254 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~---g~-- 254 (357)
++.+|+|+|+|.+|+.+++.++.+|++|+++++++++.+.+.+.++........+.+.+.+....+|++|+++ +.
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~ 245 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKA 245 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCC
Confidence 3456999999999999999999999999999999888887776677643333444445555566899999997 32
Q ss_pred CC-ChHHHHhccccCCeEEEEccCC
Q 018382 255 NH-PLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 255 ~~-~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
.. .....++.+++++.+++++...
T Consensus 246 p~lit~~~l~~mk~g~vIvDva~d~ 270 (370)
T TIGR00518 246 PKLVSNSLVAQMKPGAVIVDVAIDQ 270 (370)
T ss_pred CcCcCHHHHhcCCCCCEEEEEecCC
Confidence 11 2367888899999999987654
No 137
>PLN02494 adenosylhomocysteinase
Probab=98.38 E-value=7.6e-06 Score=77.13 Aligned_cols=102 Identities=18% Similarity=0.169 Sum_probs=79.2
Q ss_pred hhhhhccC-CCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccE
Q 018382 169 FSPLSHFG-LKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDY 247 (357)
Q Consensus 169 ~~~l~~~~-~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~ 247 (357)
+.++.+.. ..-.|++|+|+|.|.+|...++.++.+|++|+++.+++.+...+.. .|...+ + +.+.....|+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~-~G~~vv-~------leEal~~ADV 312 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQALM-EGYQVL-T------LEDVVSEADI 312 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHh-cCCeec-c------HHHHHhhCCE
Confidence 44554443 3357999999999999999999999999999999888777656655 676532 1 2233457899
Q ss_pred EEEcCCCCCCh-HHHHhccccCCeEEEEccCC
Q 018382 248 IIDTVPANHPL-EPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 248 v~d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 278 (357)
++++.|....+ ...++.|++++.++.+|-..
T Consensus 313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred EEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 99999987554 78999999999999998743
No 138
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.30 E-value=6.6e-06 Score=76.82 Aligned_cols=103 Identities=19% Similarity=0.167 Sum_probs=78.8
Q ss_pred hhhhhhcc-CCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCcc
Q 018382 168 VFSPLSHF-GLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLD 246 (357)
Q Consensus 168 a~~~l~~~-~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d 246 (357)
+|.++.+. ....+|++|+|+|.|.+|+..++.++.+|++|+++..++.+...+.. .|+. +.+. ++...+.|
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~-~G~~-v~~l------eeal~~aD 252 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAAM-DGFR-VMTM------EEAAKIGD 252 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHh-cCCE-eCCH------HHHHhcCC
Confidence 44445454 33368999999999999999999999999999999888777655555 6763 3221 22335789
Q ss_pred EEEEcCCCCCChHH-HHhccccCCeEEEEccCC
Q 018382 247 YIIDTVPANHPLEP-YLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 247 ~v~d~~g~~~~~~~-~~~~l~~~G~~v~~g~~~ 278 (357)
++|+++|....++. .+..+++++.++.+|-..
T Consensus 253 VVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 253 IFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 99999998866664 889999999999987653
No 139
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.23 E-value=2.6e-05 Score=70.11 Aligned_cols=99 Identities=23% Similarity=0.258 Sum_probs=77.0
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChH
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLE 259 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 259 (357)
.|++++|+|.|.+|.++++.++..|++|++..+++++...+.+ +|...+ . .+.+.+....+|+||++++....-.
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-~g~~~~-~---~~~l~~~l~~aDiVint~P~~ii~~ 224 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARITE-MGLIPF-P---LNKLEEKVAEIDIVINTIPALVLTA 224 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeee-c---HHHHHHHhccCCEEEECCChHHhCH
Confidence 5789999999999999999999999999999999887776665 665422 1 1223445568999999987652234
Q ss_pred HHHhccccCCeEEEEccCCCCccc
Q 018382 260 PYLSLLKLDGKLILTGVINTPMQF 283 (357)
Q Consensus 260 ~~~~~l~~~G~~v~~g~~~~~~~~ 283 (357)
..++.++++..+++++..++.++|
T Consensus 225 ~~l~~~k~~aliIDlas~Pg~tdf 248 (287)
T TIGR02853 225 DVLSKLPKHAVIIDLASKPGGTDF 248 (287)
T ss_pred HHHhcCCCCeEEEEeCcCCCCCCH
Confidence 577888998889999887776766
No 140
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.17 E-value=1.9e-07 Score=88.53 Aligned_cols=160 Identities=19% Similarity=0.282 Sum_probs=105.2
Q ss_pred ccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcc
Q 018382 66 VPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKF 145 (357)
Q Consensus 66 ~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~ 145 (357)
.-|.|+++.+.+|+++++..-+|+ +.+ ||-|..| ++.|.+.+.. |...++.|++++.++. .
T Consensus 89 ~~~~~a~~hl~~Va~GldS~V~GE-----~qI--~gQvk~a----~~~a~~~~~~-------g~~l~~lf~~a~~~~k-~ 149 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDSMVVGE-----TQI--LGQVKNA----YKVAQEEKTV-------GKVLERLFQKAFSVGK-R 149 (417)
T ss_pred cCchHHHHHHHHHHhhhhhhhcCC-----hHH--HHHHHHH----HHHHHHcCCc-------hHHHHHHHHHHHHHhh-h
Confidence 358999999999999988744444 333 7777777 5555544333 2335788999987765 2
Q ss_pred eEE---C-CCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHH
Q 018382 146 VVK---I-PDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEA 220 (357)
Q Consensus 146 ~~~---l-P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~ 220 (357)
+.. + +..+|...+| .-.+....+. .++++|+|+|+|.+|..+++.++..|+ +|+++.++.++...+
T Consensus 150 vr~~t~i~~~~vSv~~~A--------v~la~~~~~~-l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~l 220 (417)
T TIGR01035 150 VRTETDISAGAVSISSAA--------VELAERIFGS-LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDL 220 (417)
T ss_pred hhhhcCCCCCCcCHHHHH--------HHHHHHHhCC-ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 221 2 2222222221 1112222333 578999999999999999999999995 899999998887656
Q ss_pred HHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382 221 MEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP 257 (357)
Q Consensus 221 ~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (357)
.+.+|... ++. +...+...++|+||+|++....
T Consensus 221 a~~~g~~~-i~~---~~l~~~l~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 221 AKELGGEA-VKF---EDLEEYLAEADIVISSTGAPHP 253 (417)
T ss_pred HHHcCCeE-eeH---HHHHHHHhhCCEEEECCCCCCc
Confidence 55588643 322 2233444589999999987643
No 141
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.09 E-value=1.3e-05 Score=73.21 Aligned_cols=109 Identities=17% Similarity=0.177 Sum_probs=79.8
Q ss_pred cceEECCCCCCccccccccchhhhhhhhhhccCCC---CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHH
Q 018382 144 KFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLK---QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVE 219 (357)
Q Consensus 144 ~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~---~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~ 219 (357)
...+++|+.+..+.++... +.+.++.++..+... -++.+|+|+|+|.+|..+++.++..|+ +|+++.++.++...
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 4567888888888877554 445566666544432 378999999999999999999998776 78899998888766
Q ss_pred HHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382 220 AMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP 257 (357)
Q Consensus 220 ~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (357)
+.+++|.. +++. +.+.+....+|+||.+++....
T Consensus 218 la~~~g~~-~~~~---~~~~~~l~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL---DELLELLNEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH---HHHHHHHhcCCEEEECCCCCch
Confidence 66668874 3332 2233344579999999998844
No 142
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.09 E-value=3.4e-05 Score=73.05 Aligned_cols=125 Identities=12% Similarity=0.130 Sum_probs=86.5
Q ss_pred ceEECCCCCCccccc-cccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh
Q 018382 145 FVVKIPDGMALEQAA-PLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH 223 (357)
Q Consensus 145 ~~~~lP~~l~~~~aa-~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~ 223 (357)
.++.+|+..+-..+- ++.+..+++-..++..+..-.|++|+|+|.|.+|..+++.++.+|++|+++.+++.+...+..
T Consensus 217 PV~nv~d~~tk~~aD~~~G~~~s~~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~- 295 (476)
T PTZ00075 217 PAINVNDSVTKSKFDNIYGCRHSLIDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAM- 295 (476)
T ss_pred eEEEeCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-
Confidence 445566654433222 233222222222333344457999999999999999999999999999998877666544444
Q ss_pred cCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChH-HHHhccccCCeEEEEccC
Q 018382 224 LGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLE-PYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 224 ~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 277 (357)
.|+..+ .+.++....|+|+.++|....+. ..++.|++++.++.+|-.
T Consensus 296 ~G~~~~-------~leell~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 296 EGYQVV-------TLEDVVETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred cCceec-------cHHHHHhcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence 565422 13445568999999999876664 799999999999998765
No 143
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.09 E-value=4.2e-06 Score=82.87 Aligned_cols=96 Identities=19% Similarity=0.243 Sum_probs=67.2
Q ss_pred CCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCC---------------------cHHHHHHHHhcCCcEEEcCCC-h
Q 018382 178 KQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSS---------------------DKKRVEAMEHLGADQYLVSSD-A 235 (357)
Q Consensus 178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~---------------------~~~~~~~~~~~g~~~vv~~~~-~ 235 (357)
..+|++|+|+|+|+.|+++++.++..|++|+++... +.+.+.+++ +|++..++... .
T Consensus 134 ~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~-~Gv~~~~~~~~~~ 212 (564)
T PRK12771 134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILD-LGVEVRLGVRVGE 212 (564)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHH-CCCEEEeCCEECC
Confidence 378999999999999999999999999999998743 234556666 89877666433 1
Q ss_pred h-HHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEE
Q 018382 236 T-RMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 236 ~-~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 274 (357)
+ ....+..++|+||+++|........+......|.+..+
T Consensus 213 ~~~~~~~~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~ 252 (564)
T PRK12771 213 DITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAV 252 (564)
T ss_pred cCCHHHHHhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHH
Confidence 1 12334457999999999864333344444455554433
No 144
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.06 E-value=1.5e-05 Score=63.27 Aligned_cols=95 Identities=22% Similarity=0.320 Sum_probs=66.7
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAADSLDYIIDTVPAN 255 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~d~v~d~~g~~ 255 (357)
-++++++|+|+|++|.+++..+...|+ +|+++.|+.++.+.+.+.++.. .+++..+ +.+....+|+||+|++..
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQEADIVINATPSG 86 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHHTESEEEE-SSTT
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHhhCCeEEEecCCC
Confidence 468999999999999999999999999 5999999999998888878532 2344333 224445899999998876
Q ss_pred CChHHHHhccccC----CeEEEEccC
Q 018382 256 HPLEPYLSLLKLD----GKLILTGVI 277 (357)
Q Consensus 256 ~~~~~~~~~l~~~----G~~v~~g~~ 277 (357)
.. ......+... +.+++++.+
T Consensus 87 ~~-~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 87 MP-IITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp ST-SSTHHHHTTTCHHCSEEEES-SS
T ss_pred Cc-ccCHHHHHHHHhhhhceeccccC
Confidence 32 2222233333 577777653
No 145
>PRK08324 short chain dehydrogenase; Validated
Probab=97.98 E-value=3.5e-05 Score=78.01 Aligned_cols=111 Identities=18% Similarity=0.168 Sum_probs=77.3
Q ss_pred CccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEe
Q 018382 133 GGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVIS 211 (357)
Q Consensus 133 G~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~ 211 (357)
-++++|..+++..++.+ +.++++++..-... .... .+|+++||+|+ |++|.++++.+...|++|++++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~---------~~~~-l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP---------KPKP-LAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcCC---------CCcC-CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence 45678888888777777 66777776521100 1111 46899999986 9999999999999999999999
Q ss_pred CCcHHHHHHHHhcCC-----cEEEcCCChhHHHHh-------hCCccEEEEcCCC
Q 018382 212 SSDKKRVEAMEHLGA-----DQYLVSSDATRMQEA-------ADSLDYIIDTVPA 254 (357)
Q Consensus 212 ~~~~~~~~~~~~~g~-----~~vv~~~~~~~~~~~-------~~~~d~v~d~~g~ 254 (357)
++.++.+.+.+.++. ....|..+.+.+++. .+++|++|+++|.
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~ 508 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGI 508 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 998877666554543 123455555433322 2379999999984
No 146
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.93 E-value=7.7e-05 Score=65.90 Aligned_cols=130 Identities=20% Similarity=0.287 Sum_probs=81.0
Q ss_pred cceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCC
Q 018382 135 FAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSS 213 (357)
Q Consensus 135 ~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~ 213 (357)
|.+|.. +...++++++++++..+. .+.... ....+... ..++++||-+|+|. |..++.+++ .|+ +|++++.+
T Consensus 79 ~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~~--~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis 151 (250)
T PRK00517 79 WEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEKL--VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDID 151 (250)
T ss_pred CcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHhh--cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECC
Confidence 334433 567789999998888765 221111 22222222 36889999999986 877776555 566 69999999
Q ss_pred cHHHHHHHHhcCCcEE---EcCCChhHHHHhhCCccEEEEcCCCC---CChHHHHhccccCCeEEEEccC
Q 018382 214 DKKRVEAMEHLGADQY---LVSSDATRMQEAADSLDYIIDTVPAN---HPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 214 ~~~~~~~~~~~g~~~v---v~~~~~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
+...+.+++.+....+ +.... ....+|+|+...... ..+..+.+.|+++|.++..+..
T Consensus 152 ~~~l~~A~~n~~~~~~~~~~~~~~------~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 152 PQAVEAARENAELNGVELNVYLPQ------GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred HHHHHHHHHHHHHcCCCceEEEcc------CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence 8887776664321111 11000 011599998655433 1345678889999999987654
No 147
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.91 E-value=7.4e-05 Score=63.98 Aligned_cols=76 Identities=16% Similarity=0.270 Sum_probs=61.5
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC----cEEEcCCChhH----HHHhh---CCccE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA----DQYLVSSDATR----MQEAA---DSLDY 247 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~----~~vv~~~~~~~----~~~~~---~~~d~ 247 (357)
+++.++|+|+ +++|.+.++.+...|++|+.+.|..++++++..+++. ...+|..+.+. ++.+. +.+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 4578899998 9999999999999999999999999999999988993 34566666543 33232 37999
Q ss_pred EEEcCCCC
Q 018382 248 IIDTVPAN 255 (357)
Q Consensus 248 v~d~~g~~ 255 (357)
.++.+|-.
T Consensus 85 LvNNAGl~ 92 (246)
T COG4221 85 LVNNAGLA 92 (246)
T ss_pred EEecCCCC
Confidence 99998874
No 148
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.74 E-value=0.00025 Score=62.28 Aligned_cols=77 Identities=14% Similarity=0.179 Sum_probs=59.9
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-------EEEcCCChhHHHHhh----C---
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-------QYLVSSDATRMQEAA----D--- 243 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-------~vv~~~~~~~~~~~~----~--- 243 (357)
..+.++||+|+ +++|...+..+...|.+|+.++|++++++.+.+++.-. ..+|..+++.++.+. .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 46789999998 99999999999999999999999999988877656522 234666655444332 2
Q ss_pred CccEEEEcCCCC
Q 018382 244 SLDYIIDTVPAN 255 (357)
Q Consensus 244 ~~d~v~d~~g~~ 255 (357)
.+|+.++++|-.
T Consensus 84 ~IdvLVNNAG~g 95 (265)
T COG0300 84 PIDVLVNNAGFG 95 (265)
T ss_pred cccEEEECCCcC
Confidence 699999999875
No 149
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.72 E-value=0.00035 Score=58.33 Aligned_cols=105 Identities=16% Similarity=0.133 Sum_probs=73.3
Q ss_pred CCCeEEEEec--ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-cEEEcCCChhHHHHh--------hCCccEE
Q 018382 180 SGLRGGILGL--GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-DQYLVSSDATRMQEA--------ADSLDYI 248 (357)
Q Consensus 180 ~~~~VlI~G~--g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~--------~~~~d~v 248 (357)
..+.|||+|+ |++|.+++.-....|+.|++++|+.++...+..++|. ..-+|..+++.+... .+..|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 4577999975 9999999988888999999999999999888866894 334566665433322 1368999
Q ss_pred EEcCCCC----------------------C--ChHHH--HhccccCCeEEEEccCCCCcccc
Q 018382 249 IDTVPAN----------------------H--PLEPY--LSLLKLDGKLILTGVINTPMQFL 284 (357)
Q Consensus 249 ~d~~g~~----------------------~--~~~~~--~~~l~~~G~~v~~g~~~~~~~~~ 284 (357)
++.+|-. . .+..+ -.+.+..|++|.+|....-.+++
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp 147 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP 147 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc
Confidence 9877653 0 11111 22466789999988765444433
No 150
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.66 E-value=0.0004 Score=64.34 Aligned_cols=98 Identities=19% Similarity=0.250 Sum_probs=76.5
Q ss_pred CeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcC---CcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382 182 LRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLG---ADQYLVSSDATRMQEAADSLDYIIDTVPANHP 257 (357)
Q Consensus 182 ~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g---~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (357)
.+|||+|+|.+|..+++.+...+ .+|++++++.++...+....+ ....+|..+.+.+.++..++|+||++.+....
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence 57999999999999999988888 699999999998888877332 24467887877777888888999999998744
Q ss_pred hHHHHhccccCCeEEEEccCCC
Q 018382 258 LEPYLSLLKLDGKLILTGVINT 279 (357)
Q Consensus 258 ~~~~~~~l~~~G~~v~~g~~~~ 279 (357)
......+++.+=.++++.....
T Consensus 82 ~~i~ka~i~~gv~yvDts~~~~ 103 (389)
T COG1748 82 LTILKACIKTGVDYVDTSYYEE 103 (389)
T ss_pred HHHHHHHHHhCCCEEEcccCCc
Confidence 5445566666667877765443
No 151
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.63 E-value=0.00026 Score=58.77 Aligned_cols=75 Identities=16% Similarity=0.142 Sum_probs=59.4
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC--CcEEEcCCChh----HHHHhhC---CccEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG--ADQYLVSSDAT----RMQEAAD---SLDYII 249 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g--~~~vv~~~~~~----~~~~~~~---~~d~v~ 249 (357)
-|.+|||+|+ +++|++.++-...+|-+|++..|+++++++++.... ...+.|..|.+ .++++.+ ..++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 4679999965 999999999999999999999999999999888555 34556666644 4444444 589999
Q ss_pred EcCCC
Q 018382 250 DTVPA 254 (357)
Q Consensus 250 d~~g~ 254 (357)
+++|-
T Consensus 84 NNAGI 88 (245)
T COG3967 84 NNAGI 88 (245)
T ss_pred ecccc
Confidence 98875
No 152
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.62 E-value=0.00062 Score=57.29 Aligned_cols=103 Identities=26% Similarity=0.329 Sum_probs=70.8
Q ss_pred hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHH---HHhcCCcEE-EcCCChhHHHHhhCCcc
Q 018382 171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEA---MEHLGADQY-LVSSDATRMQEAADSLD 246 (357)
Q Consensus 171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~---~~~~g~~~v-v~~~~~~~~~~~~~~~d 246 (357)
++..+.. +++++||=+|+|. |+.++-+++..+ +|+.+.+.++=.+.+ .+.+|...+ +...|...--....+||
T Consensus 64 m~~~L~~-~~g~~VLEIGtGs-GY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aPyD 140 (209)
T COG2518 64 MLQLLEL-KPGDRVLEIGTGS-GYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEEAPYD 140 (209)
T ss_pred HHHHhCC-CCCCeEEEECCCc-hHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCCCCcC
Confidence 4444444 9999999999863 899999999888 999999887633333 233786433 33333211011124799
Q ss_pred EEEEcCCCCCChHHHHhccccCCeEEEEcc
Q 018382 247 YIIDTVPANHPLEPYLSLLKLDGKLILTGV 276 (357)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~ 276 (357)
.++-+.+....-..+++.|+++|+++..-.
T Consensus 141 ~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 141 RIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred EEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 998888877566789999999999887543
No 153
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.60 E-value=0.0003 Score=67.08 Aligned_cols=161 Identities=19% Similarity=0.200 Sum_probs=98.9
Q ss_pred ccCccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCcccccccccccCccccCCCCCCCCccceEEEeeCcc
Q 018382 66 VPGHEVVGEVKEVGSEVSNFKVGDKVGVGVLVGCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKF 145 (357)
Q Consensus 66 ~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~ 145 (357)
.-|+|+++.+.+|+++.+..-+|+.=+ ||-|. ...+.|...+.. |...++.|++.+.+
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qI-------lgQvk----~a~~~a~~~g~~-------g~~l~~lf~~a~~~---- 148 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQI-------LGQVK----DAYALAQEAGTV-------GTILNRLFQKAFSV---- 148 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHH-------HHHHH----HHHHHHHHcCCc-------hHHHHHHHHHHHHH----
Confidence 359999999999999988755555321 22222 222333322211 11234555554433
Q ss_pred eEECCCCCCccccccccchhhhhhhhhhccCC---CCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHH
Q 018382 146 VVKIPDGMALEQAAPLLCAGVTVFSPLSHFGL---KQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAM 221 (357)
Q Consensus 146 ~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~---~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~ 221 (357)
|+.+..+.+. ...+.+.++.++..+.. -.++++|+|+|+|.+|.++++.++..|+ +|+++.++.++...+.
T Consensus 149 ----~k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la 223 (423)
T PRK00045 149 ----AKRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELA 223 (423)
T ss_pred ----HhhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence 3333322221 12233444555544332 1578999999999999999999999998 8999999988877666
Q ss_pred HhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382 222 EHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP 257 (357)
Q Consensus 222 ~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (357)
+.+|.+ +++. +...+...++|+||+|++....
T Consensus 224 ~~~g~~-~~~~---~~~~~~l~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 224 EEFGGE-AIPL---DELPEALAEADIVISSTGAPHP 255 (423)
T ss_pred HHcCCc-EeeH---HHHHHHhccCCEEEECCCCCCc
Confidence 658864 3332 2233344589999999988643
No 154
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.56 E-value=0.00089 Score=58.38 Aligned_cols=98 Identities=21% Similarity=0.300 Sum_probs=67.0
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcEE--EcCCChhHHHHh-------hCCcc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQY--LVSSDATRMQEA-------ADSLD 246 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~v--v~~~~~~~~~~~-------~~~~d 246 (357)
++++|||+|+ |.+|..+++.+...|++|+++++++++.+.+.+.. +..+. .|..+++.++++ .+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999987 99999999999999999999999988776553323 22222 344444433322 23689
Q ss_pred EEEEcCCCCC-----------------------ChHHHHhccccCCeEEEEccC
Q 018382 247 YIIDTVPANH-----------------------PLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 247 ~v~d~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~ 277 (357)
.++.+++... .++.....++++|+++.++..
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 9999887531 133444556678888888764
No 155
>PRK12742 oxidoreductase; Provisional
Probab=97.53 E-value=0.0013 Score=57.36 Aligned_cols=75 Identities=20% Similarity=0.197 Sum_probs=52.5
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHHhcCCcEE-EcCCChhHHHHhh---CCccEEEEcCC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAMEHLGADQY-LVSSDATRMQEAA---DSLDYIIDTVP 253 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~---~~~d~v~d~~g 253 (357)
+++++||+|+ |++|.++++.+...|++|+++.+ ++++.+.+.++++...+ .|..+.+.+.+.. +++|++++++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 4789999987 99999999999999999988765 44555555444665433 4555544333322 36899999987
Q ss_pred C
Q 018382 254 A 254 (357)
Q Consensus 254 ~ 254 (357)
.
T Consensus 85 ~ 85 (237)
T PRK12742 85 I 85 (237)
T ss_pred C
Confidence 5
No 156
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.49 E-value=0.00066 Score=56.64 Aligned_cols=121 Identities=19% Similarity=0.234 Sum_probs=79.5
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC--
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH-- 256 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~-- 256 (357)
-.|++|.|+|.|.+|...++.++.+|++|++.+++........+ .+... . .++++....|+|+.+.....
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~~~~----~---~l~ell~~aDiv~~~~plt~~T 105 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FGVEY----V---SLDELLAQADIVSLHLPLTPET 105 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TTEEE----S---SHHHHHHH-SEEEE-SSSSTTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhccc-cccee----e---ehhhhcchhhhhhhhhcccccc
Confidence 46899999999999999999999999999999999776553334 55421 1 23445556999998776421
Q ss_pred --C-hHHHHhccccCCeEEEEccCCCCcccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCccE-EEeecccHH
Q 018382 257 --P-LEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMI-EVIKMDYVN 331 (357)
Q Consensus 257 --~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~ 331 (357)
. -...++.|+++..+|.++=.. .-+-+.+.+.+++|.+..-. ++|.-|.++
T Consensus 106 ~~li~~~~l~~mk~ga~lvN~aRG~------------------------~vde~aL~~aL~~g~i~ga~lDV~~~EP~~ 160 (178)
T PF02826_consen 106 RGLINAEFLAKMKPGAVLVNVARGE------------------------LVDEDALLDALESGKIAGAALDVFEPEPLP 160 (178)
T ss_dssp TTSBSHHHHHTSTTTEEEEESSSGG------------------------GB-HHHHHHHHHTTSEEEEEESS-SSSSSS
T ss_pred ceeeeeeeeeccccceEEEeccchh------------------------hhhhhHHHHHHhhccCceEEEECCCCCCCC
Confidence 2 245788899888888763211 11445667777777776533 555555443
No 157
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.47 E-value=0.0024 Score=51.63 Aligned_cols=97 Identities=20% Similarity=0.229 Sum_probs=67.1
Q ss_pred cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382 175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPA 254 (357)
Q Consensus 175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~ 254 (357)
....-.|++++|.|-|-+|...++.++.+|++|+++...+-+.-++.. -|.... .+++.....|++|.++|.
T Consensus 17 t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf~v~-------~~~~a~~~adi~vtaTG~ 88 (162)
T PF00670_consen 17 TNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGFEVM-------TLEEALRDADIFVTATGN 88 (162)
T ss_dssp H-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT-EEE--------HHHHTTT-SEEEE-SSS
T ss_pred CceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCcEec-------CHHHHHhhCCEEEECCCC
Confidence 344468999999999999999999999999999999998777665555 565421 245566689999999999
Q ss_pred CCCh-HHHHhccccCCeEEEEccCCC
Q 018382 255 NHPL-EPYLSLLKLDGKLILTGVINT 279 (357)
Q Consensus 255 ~~~~-~~~~~~l~~~G~~v~~g~~~~ 279 (357)
...+ ..-++.|+++-.+..+|....
T Consensus 89 ~~vi~~e~~~~mkdgail~n~Gh~d~ 114 (162)
T PF00670_consen 89 KDVITGEHFRQMKDGAILANAGHFDV 114 (162)
T ss_dssp SSSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred ccccCHHHHHHhcCCeEEeccCcCce
Confidence 7543 577889999988888876543
No 158
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.46 E-value=0.0011 Score=58.71 Aligned_cols=98 Identities=19% Similarity=0.226 Sum_probs=78.7
Q ss_pred CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcC---CC---C
Q 018382 182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTV---PA---N 255 (357)
Q Consensus 182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~---g~---~ 255 (357)
.+|.|+|+|.+|.-++.+|..+|++|++.+.+.+|+..+...|+-..-.-++.+..+++.....|++|.++ |. .
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaPk 248 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAPK 248 (371)
T ss_pred ccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCce
Confidence 45888899999999999999999999999999999999988788663344566677777777899998754 22 1
Q ss_pred CChHHHHhccccCCeEEEEccCCC
Q 018382 256 HPLEPYLSLLKLDGKLILTGVINT 279 (357)
Q Consensus 256 ~~~~~~~~~l~~~G~~v~~g~~~~ 279 (357)
-..++..+.|+|++.++++....+
T Consensus 249 Lvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 249 LVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred ehhHHHHHhcCCCcEEEEEEEcCC
Confidence 145677899999999999865443
No 159
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.42 E-value=0.0013 Score=54.93 Aligned_cols=91 Identities=19% Similarity=0.165 Sum_probs=67.7
Q ss_pred EEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhhCCccEEEEcCCCCC----C
Q 018382 184 GGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAADSLDYIIDTVPANH----P 257 (357)
Q Consensus 184 VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~d~v~d~~g~~~----~ 257 (357)
|+|+|+ |.+|..+++.+...|.+|++++|++++.+. ..+.+.+ .|..+.+.+.+...++|+||.+++... .
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~ 77 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA 77 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence 689997 999999999999999999999999887766 2454433 356667777777779999999998532 2
Q ss_pred hHHHHhccccCC--eEEEEccC
Q 018382 258 LEPYLSLLKLDG--KLILTGVI 277 (357)
Q Consensus 258 ~~~~~~~l~~~G--~~v~~g~~ 277 (357)
....++.++..| +++.++..
T Consensus 78 ~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 78 AKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp HHHHHHHHHHTTSSEEEEEEET
T ss_pred cccccccccccccccceeeecc
Confidence 444555555544 67766554
No 160
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.35 E-value=0.0022 Score=54.50 Aligned_cols=95 Identities=14% Similarity=0.190 Sum_probs=65.8
Q ss_pred CCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHH---hcC-CcE--EEcCCChhHHHHhhCCccEEE
Q 018382 178 KQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAME---HLG-ADQ--YLVSSDATRMQEAADSLDYII 249 (357)
Q Consensus 178 ~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~---~~g-~~~--vv~~~~~~~~~~~~~~~d~v~ 249 (357)
+.++++||.+|+|. |..++.+++..+ .+|++++.+++..+.+++ .+| .+. ++..+..+.+......+|.||
T Consensus 38 ~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V~ 116 (198)
T PRK00377 38 LRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRIF 116 (198)
T ss_pred CCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEEE
Confidence 38999999999877 888888888764 489999999887765543 255 222 222222333444446899999
Q ss_pred EcCCCC---CChHHHHhccccCCeEEE
Q 018382 250 DTVPAN---HPLEPYLSLLKLDGKLIL 273 (357)
Q Consensus 250 d~~g~~---~~~~~~~~~l~~~G~~v~ 273 (357)
...+.. ..+..+.+.|+++|+++.
T Consensus 117 ~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 117 IGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred ECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 855432 245677888999999875
No 161
>PRK06182 short chain dehydrogenase; Validated
Probab=97.33 E-value=0.0029 Score=56.51 Aligned_cols=75 Identities=17% Similarity=0.194 Sum_probs=55.7
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhh-------CCccEEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAA-------DSLDYIID 250 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~-------~~~d~v~d 250 (357)
++++++|+|+ |++|.++++.+...|++|+++++++++.+.+.+ .+... ..|..+.+.++++. +++|++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3578999987 999999999998899999999999887765554 45432 34666655443332 37999999
Q ss_pred cCCCC
Q 018382 251 TVPAN 255 (357)
Q Consensus 251 ~~g~~ 255 (357)
++|..
T Consensus 81 ~ag~~ 85 (273)
T PRK06182 81 NAGYG 85 (273)
T ss_pred CCCcC
Confidence 98753
No 162
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.30 E-value=0.002 Score=57.78 Aligned_cols=110 Identities=24% Similarity=0.256 Sum_probs=70.7
Q ss_pred hhhhhhhhc-cCCCCCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC
Q 018382 166 VTVFSPLSH-FGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD 243 (357)
Q Consensus 166 ~ta~~~l~~-~~~~~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~ 243 (357)
.....++.. ...-..+++|+|+|+|++|.+++..+...| .+|+++.|+.++.+.+.+.++....+.. .. ...+...
T Consensus 107 ~G~~~~l~~~~~~~~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~~ 184 (278)
T PRK00258 107 IGFVRALEERLGVDLKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEELA 184 (278)
T ss_pred HHHHHHHHhccCCCCCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhccc
Confidence 334444543 232246788999999999999999999999 5999999999888777765653210111 00 1112335
Q ss_pred CccEEEEcCCCCCC-----hHHHHhccccCCeEEEEccC
Q 018382 244 SLDYIIDTVPANHP-----LEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 244 ~~d~v~d~~g~~~~-----~~~~~~~l~~~G~~v~~g~~ 277 (357)
.+|+|++++..... .......++++..++++-..
T Consensus 185 ~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~ 223 (278)
T PRK00258 185 DFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYG 223 (278)
T ss_pred cCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecC
Confidence 79999999876521 01233567777777776443
No 163
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0038 Score=55.97 Aligned_cols=74 Identities=14% Similarity=0.145 Sum_probs=55.2
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHH----hh----CCccEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQE----AA----DSLDYII 249 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~----~~----~~~d~v~ 249 (357)
.++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+ .+...+ .|..+.+.+++ +. +.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-EGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4578999987 999999999998889999999999888777665 454332 46666543322 21 3689999
Q ss_pred EcCCC
Q 018382 250 DTVPA 254 (357)
Q Consensus 250 d~~g~ 254 (357)
+++|.
T Consensus 82 ~~Ag~ 86 (277)
T PRK05993 82 NNGAY 86 (277)
T ss_pred ECCCc
Confidence 98864
No 164
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.28 E-value=0.0015 Score=49.70 Aligned_cols=94 Identities=27% Similarity=0.292 Sum_probs=63.1
Q ss_pred CCCeEEEEecChHHHHHHHHHH-HcCCeEEEEeCCcHHHHHHHHhc---C--CcEEEcCCChhHHHHhhCCccEEEEcC-
Q 018382 180 SGLRGGILGLGGVGHMGVLIAK-AMGHHVTVISSSDKKRVEAMEHL---G--ADQYLVSSDATRMQEAADSLDYIIDTV- 252 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~-~~g~~V~~~~~~~~~~~~~~~~~---g--~~~vv~~~~~~~~~~~~~~~d~v~d~~- 252 (357)
|+.+||-+|+|. |..++.+++ ..+++|++++.+++..+.+++.. + ..-.+-..+.........+||+|+...
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~ 79 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSGF 79 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECSG
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECCC
Confidence 678999998864 777777777 56889999999999888777765 2 121122222212223334799999866
Q ss_pred CCC---C------ChHHHHhccccCCeEEEE
Q 018382 253 PAN---H------PLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 253 g~~---~------~~~~~~~~l~~~G~~v~~ 274 (357)
... . .++.+.+.|+|+|+++.-
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 80 TLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp SGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 221 1 156788899999998753
No 165
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.28 E-value=0.0021 Score=62.64 Aligned_cols=78 Identities=15% Similarity=0.136 Sum_probs=59.0
Q ss_pred CCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc--------CC------c-EEEcCCChhHHHHh
Q 018382 178 KQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL--------GA------D-QYLVSSDATRMQEA 241 (357)
Q Consensus 178 ~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~--------g~------~-~vv~~~~~~~~~~~ 241 (357)
.+.|+++||+|+ |.+|..+++.+...|++|++++++.++...+.+.+ |. . ...|..+.+.++..
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 368899999987 99999999999888999999999988765543321 21 1 12456666666666
Q ss_pred hCCccEEEEcCCCC
Q 018382 242 ADSLDYIIDTVPAN 255 (357)
Q Consensus 242 ~~~~d~v~d~~g~~ 255 (357)
.+++|+||.++|..
T Consensus 157 LggiDiVVn~AG~~ 170 (576)
T PLN03209 157 LGNASVVICCIGAS 170 (576)
T ss_pred hcCCCEEEEccccc
Confidence 67899999998764
No 166
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.27 E-value=0.003 Score=51.95 Aligned_cols=98 Identities=19% Similarity=0.269 Sum_probs=68.0
Q ss_pred cccccchhhhhhhhhhccCCCCCCCeEEEEecCh-HHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChh
Q 018382 158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGG-VGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDAT 236 (357)
Q Consensus 158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~-~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~ 236 (357)
....|+...++...++....--.+++|+|+|+|. +|..++..++..|++|+++.++.+
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~--------------------- 79 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK--------------------- 79 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch---------------------
Confidence 4556666555555555554336789999999986 599899999999999888887531
Q ss_pred HHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 237 RMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 237 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
.+.+....+|+||.+++....+. .+.++++-.+++++.+.
T Consensus 80 ~l~~~l~~aDiVIsat~~~~ii~--~~~~~~~~viIDla~pr 119 (168)
T cd01080 80 NLKEHTKQADIVIVAVGKPGLVK--GDMVKPGAVVIDVGINR 119 (168)
T ss_pred hHHHHHhhCCEEEEcCCCCceec--HHHccCCeEEEEccCCC
Confidence 12234457899999999874332 23566666677777654
No 167
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.26 E-value=0.0028 Score=56.26 Aligned_cols=104 Identities=17% Similarity=0.231 Sum_probs=69.4
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHH----HHhcC-Cc--EE--EcCCChhHHH----Hh---
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEA----MEHLG-AD--QY--LVSSDATRMQ----EA--- 241 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~----~~~~g-~~--~v--v~~~~~~~~~----~~--- 241 (357)
-.++.|+|+|| +++|.+.+.-.-..|++++.+++...+.+.+ ++ .+ .+ ++ .|..+.+.++ ++
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~-~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRK-LGSLEKVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHH-hCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence 36789999998 9999998888888899988888877766555 33 33 23 11 2444544333 22
Q ss_pred hCCccEEEEcCCCC-------------------------CChHHHHhccccC--CeEEEEccCCCCccc
Q 018382 242 ADSLDYIIDTVPAN-------------------------HPLEPYLSLLKLD--GKLILTGVINTPMQF 283 (357)
Q Consensus 242 ~~~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~~~~~~~ 283 (357)
.+++|+.++.+|-. ...+.++..|++. |++|.++...+....
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~ 157 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL 157 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC
Confidence 24899999988754 2334455566554 999998776654433
No 168
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.004 Score=55.23 Aligned_cols=75 Identities=15% Similarity=0.157 Sum_probs=55.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHh-------hCCccEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEA-------ADSLDYI 248 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~~~d~v 248 (357)
.++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++.. ...|..+.+.++++ .+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999987 99999999999889999999999887776666656532 12455555433332 1368999
Q ss_pred EEcCCC
Q 018382 249 IDTVPA 254 (357)
Q Consensus 249 ~d~~g~ 254 (357)
++++|.
T Consensus 85 v~~ag~ 90 (261)
T PRK08265 85 VNLACT 90 (261)
T ss_pred EECCCC
Confidence 999874
No 169
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.24 E-value=0.0036 Score=56.27 Aligned_cols=76 Identities=21% Similarity=0.313 Sum_probs=55.2
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPAN 255 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~~ 255 (357)
++++|+|+|+|+.|.+++..+...|+ +|+++.|+.++.+.+.+.++... +......+.+......+|+|++|++..
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD 201 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence 57899999999999999999999998 89999999998888777665321 111111111223335799999998775
No 170
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.22 E-value=0.0059 Score=51.64 Aligned_cols=77 Identities=21% Similarity=0.286 Sum_probs=56.2
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCcE-EEcCCChhHHHHhhCCccEEEEcC
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GADQ-YLVSSDATRMQEAADSLDYIIDTV 252 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~~-vv~~~~~~~~~~~~~~~d~v~d~~ 252 (357)
-++.+++|+|+ |.+|..++..+...|.+|+++.++.++.+.+.+.+ +... ..+..+.+.+.+...+.|+||.++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 36789999986 99999988888888999999999888776665533 3221 233444444445556899999988
Q ss_pred CCC
Q 018382 253 PAN 255 (357)
Q Consensus 253 g~~ 255 (357)
...
T Consensus 106 ~~g 108 (194)
T cd01078 106 AAG 108 (194)
T ss_pred CCC
Confidence 776
No 171
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0024 Score=57.94 Aligned_cols=75 Identities=17% Similarity=0.204 Sum_probs=56.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC--cE-E--EcCCChhHHHHh-------hCCcc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA--DQ-Y--LVSSDATRMQEA-------ADSLD 246 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~~-v--v~~~~~~~~~~~-------~~~~d 246 (357)
+++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++. .. . .|..+.+.+++. .+++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999987 9999999999999999999999998887776665652 11 1 466665443332 24799
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
++++++|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999985
No 172
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.19 E-value=0.007 Score=54.65 Aligned_cols=100 Identities=14% Similarity=0.172 Sum_probs=62.7
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCe-EEEEeCCc---HHHHHHHHhcCC---c---EEEcCCChhHHHHhhCCccEE
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHH-VTVISSSD---KKRVEAMEHLGA---D---QYLVSSDATRMQEAADSLDYI 248 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~-V~~~~~~~---~~~~~~~~~~g~---~---~vv~~~~~~~~~~~~~~~d~v 248 (357)
-.+++++|+|+|++|.+++..+...|++ |+++.|+. ++.+.+.+++.. . ...+..+.+.+.+....+|++
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil 203 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL 203 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence 3578899999999999998888888995 99999986 555554443421 1 123443333344444578999
Q ss_pred EEcCCCCC-----ChHH-HHhccccCCeEEEEccCC
Q 018382 249 IDTVPANH-----PLEP-YLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 249 ~d~~g~~~-----~~~~-~~~~l~~~G~~v~~g~~~ 278 (357)
++|+.-.. .... ....++++..++++-..+
T Consensus 204 INaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P 239 (289)
T PRK12548 204 VNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYNP 239 (289)
T ss_pred EEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCCC
Confidence 99885431 0001 124566666666664433
No 173
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0032 Score=58.05 Aligned_cols=75 Identities=20% Similarity=0.262 Sum_probs=56.0
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHhh-------CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~-------~~~ 245 (357)
+++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+. .|.+. ..|..+.+.++++. +++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 5689999987 9999999999999999999999998876654432 45432 24666655444432 479
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++|+++|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999884
No 174
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0032 Score=56.29 Aligned_cols=72 Identities=21% Similarity=0.154 Sum_probs=54.1
Q ss_pred CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhh-------CCccEEEEcC
Q 018382 182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAA-------DSLDYIIDTV 252 (357)
Q Consensus 182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~-------~~~d~v~d~~ 252 (357)
+++||+|+ |++|.++++.+...|++|+++++++++.+.+.. .+...+ .|..+.+.++++. +++|++++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47899987 999999999998899999999998877766655 454433 5666654443321 3799999999
Q ss_pred CC
Q 018382 253 PA 254 (357)
Q Consensus 253 g~ 254 (357)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 84
No 175
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0072 Score=55.84 Aligned_cols=75 Identities=17% Similarity=0.186 Sum_probs=54.6
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hCCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------ADSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~~~ 245 (357)
.++++||+|+ |++|.++++.+...|++|+++++++++.+.+.++ .|.+. ..|..+.+.++++ .+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 4678999987 9999999999988999999999988776544332 45332 2466665444433 2379
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++|+++|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999885
No 176
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.11 E-value=0.0021 Score=53.05 Aligned_cols=98 Identities=20% Similarity=0.165 Sum_probs=65.7
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEc-C-------------------CChhHHH
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLV-S-------------------SDATRMQ 239 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~-~-------------------~~~~~~~ 239 (357)
+..+|+|+|+|.+|+.|+++++.+|++|++.+...++.+.... .+...+.. . .....+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLES-LGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH-TTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhc-ccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 3478999999999999999999999999999998888777766 55443322 1 0012233
Q ss_pred HhhCCccEEEEcC---CC--CC-ChHHHHhccccCCeEEEEccCC
Q 018382 240 EAADSLDYIIDTV---PA--NH-PLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 240 ~~~~~~d~v~d~~---g~--~~-~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
+....+|+++.+. +. +. ..+..++.|+++..++++....
T Consensus 98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 3344789998643 11 11 3467888899998899886543
No 177
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.11 E-value=0.01 Score=50.62 Aligned_cols=116 Identities=13% Similarity=0.060 Sum_probs=72.9
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL 258 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (357)
.|++|||+|+|.+|..-++.+...|++|++++.... ....+.+ .|.-..+. ++.. .....++++||-+++....-
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~-~~~i~~~~-~~~~--~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAE-QGGITWLA-RCFD--ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH-cCCEEEEe-CCCC--HHHhCCcEEEEECCCCHHHH
Confidence 578999999999999999999999999999887543 3334444 34222221 1111 22335899999998887444
Q ss_pred HHHHhccccCCeEEEEccCCCCcccchHHHh-hccceEEEEe
Q 018382 259 EPYLSLLKLDGKLILTGVINTPMQFLTPMVM-LGRKAITGSF 299 (357)
Q Consensus 259 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~g~~ 299 (357)
.......+..|..|.........+|.....+ ...+++.-+.
T Consensus 84 ~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT 125 (205)
T TIGR01470 84 RRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAISS 125 (205)
T ss_pred HHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEEC
Confidence 4566666777888876554443444333332 2334444333
No 178
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.004 Score=54.44 Aligned_cols=75 Identities=16% Similarity=0.210 Sum_probs=57.2
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhh---CCccEEEEcCCC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAA---DSLDYIIDTVPA 254 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~---~~~d~v~d~~g~ 254 (357)
++++++|+|+ |.+|..+++.+...|++|++++++.++.+.+.+..+... ..|..+.+.+.+.. .++|++|+++|.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~ 87 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI 87 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 5688999987 999999999999999999999998877766666456433 34666655444433 368999999875
No 179
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.09 E-value=0.0055 Score=54.65 Aligned_cols=97 Identities=19% Similarity=0.232 Sum_probs=73.6
Q ss_pred ccccchhhhhhhhhhccCCCCCCCeEEEEecCh-HHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382 159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGLGG-VGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR 237 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~-~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~ 237 (357)
..+||.....+..+++...--.|++|+|+|.|. +|.-++.++...|++|++..+... .
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~ 194 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------D 194 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------h
Confidence 456777666777777766435899999999865 999999999999999998876421 1
Q ss_pred HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
+.+....+|+||.++|.+..+.. +.++++-.++++|...
T Consensus 195 l~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 195 MASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 23445579999999999855444 4688888888888754
No 180
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.09 E-value=0.006 Score=50.33 Aligned_cols=97 Identities=22% Similarity=0.221 Sum_probs=66.4
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHH---HHhcCCc--EEEcCCChhHHHHhhCCccEEEEcC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEA---MEHLGAD--QYLVSSDATRMQEAADSLDYIIDTV 252 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~---~~~~g~~--~vv~~~~~~~~~~~~~~~d~v~d~~ 252 (357)
++|+.++=+|+|. |..+++++... ..+||++.+++++.+.. .++||.+ .++..+.++.+..+. .+|.+|---
T Consensus 33 ~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFIGG 110 (187)
T COG2242 33 RPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFIGG 110 (187)
T ss_pred CCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEECC
Confidence 8899777778742 55667777433 34999999988876544 3458866 455555566655444 799999544
Q ss_pred CCC--CChHHHHhccccCCeEEEEccC
Q 018382 253 PAN--HPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 253 g~~--~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
|.. ..++.++..|+++|++|.-..+
T Consensus 111 g~~i~~ile~~~~~l~~ggrlV~nait 137 (187)
T COG2242 111 GGNIEEILEAAWERLKPGGRLVANAIT 137 (187)
T ss_pred CCCHHHHHHHHHHHcCcCCeEEEEeec
Confidence 431 2466788899999999876443
No 181
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.08 E-value=0.0082 Score=48.60 Aligned_cols=105 Identities=24% Similarity=0.280 Sum_probs=68.0
Q ss_pred hhhccCCCCCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEE
Q 018382 171 PLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYI 248 (357)
Q Consensus 171 ~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v 248 (357)
++.+.+.-..+.+++|+|+|.+|..+++.+...| .+|++..++.++.+.+.+.++... .....+ ..+...++|+|
T Consensus 9 a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvv 85 (155)
T cd01065 9 ALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLI 85 (155)
T ss_pred HHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEE
Confidence 3444332245788999999999999999988886 589999998887776666566431 011111 12234689999
Q ss_pred EEcCCCCCC----hHHHHhccccCCeEEEEccCC
Q 018382 249 IDTVPANHP----LEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 249 ~d~~g~~~~----~~~~~~~l~~~G~~v~~g~~~ 278 (357)
+.+++.... .......++++..++.++...
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~ 119 (155)
T cd01065 86 INTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNP 119 (155)
T ss_pred EeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCC
Confidence 999887632 112234466777777775543
No 182
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.007 Score=53.04 Aligned_cols=75 Identities=19% Similarity=0.171 Sum_probs=53.8
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh-------CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~~~ 245 (357)
++++++|+|+ |++|..++..+...|++|+++.+++++.....+.+ +.. ...|..+.+.++++. +++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4788999987 99999999999889999999998877655443322 322 223555554433322 479
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999886
No 183
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.04 E-value=0.019 Score=51.75 Aligned_cols=157 Identities=17% Similarity=0.073 Sum_probs=90.1
Q ss_pred CCCeEEEEec-ChHHHHHHHHHH-HcC-CeEEEEeCCcHHHHHHHHhcC-CcEEEcCCChhHHHHhh-CCccEEEEcCCC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAK-AMG-HHVTVISSSDKKRVEAMEHLG-ADQYLVSSDATRMQEAA-DSLDYIIDTVPA 254 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~-~~g-~~V~~~~~~~~~~~~~~~~~g-~~~vv~~~~~~~~~~~~-~~~d~v~d~~g~ 254 (357)
..+.|+|+++ +-+++.++.+++ ..+ .+++.+++...+ ...+. +| .+.++.+++ +.++. ...-+++|..|+
T Consensus 135 ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~-~Fve~-lg~Yd~V~~Yd~---i~~l~~~~~~v~VDfaG~ 209 (314)
T PF11017_consen 135 GAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNV-AFVES-LGCYDEVLTYDD---IDSLDAPQPVVIVDFAGN 209 (314)
T ss_pred CccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcch-hhhhc-cCCceEEeehhh---hhhccCCCCEEEEECCCC
Confidence 3466777776 788888888888 444 489998876444 34444 88 588887754 34443 356678999999
Q ss_pred CCChHHHHhccccCC-eEEEEccCCCC-------------cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhcCCCc
Q 018382 255 NHPLEPYLSLLKLDG-KLILTGVINTP-------------MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTS 320 (357)
Q Consensus 255 ~~~~~~~~~~l~~~G-~~v~~g~~~~~-------------~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~ 320 (357)
......+.+.+...= ..+.+|.+... ..|.....+.+.+...|......+..+...+++++. ..-
T Consensus 210 ~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~-~~w 288 (314)
T PF11017_consen 210 GEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRPEFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADA-QPW 288 (314)
T ss_pred HHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCcEEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh-cCc
Confidence 866666666666643 35566654321 112222222222222222111111112222233222 111
Q ss_pred -cE-EEeecccHHHHHHHHHcCCc
Q 018382 321 -MI-EVIKMDYVNKAFERLEKNDV 342 (357)
Q Consensus 321 -~i-~~~~~~~~~~a~~~~~~~~~ 342 (357)
.+ ++-+.+.++++++.+.+++.
T Consensus 289 l~~~~~~G~ea~~~~y~~l~~G~v 312 (314)
T PF11017_consen 289 LKVEEVAGPEAVEAAYQDLLAGKV 312 (314)
T ss_pred EEEEEecCHHHHHHHHHHHhcCCC
Confidence 24 77889999999999988763
No 184
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.03 E-value=0.0032 Score=56.16 Aligned_cols=109 Identities=18% Similarity=0.244 Sum_probs=69.5
Q ss_pred hhhhhhccC--CCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhhC
Q 018382 168 VFSPLSHFG--LKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAAD 243 (357)
Q Consensus 168 a~~~l~~~~--~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~ 243 (357)
-+.+|.... ...++++++|+|+|+.+.+++.-+...|+ +++++.|+.+|.+.+.+.++.... +.......+....
T Consensus 111 ~~~~L~~~~~~~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~- 189 (283)
T COG0169 111 FLRALKEFGLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE- 189 (283)
T ss_pred HHHHHHhcCCCcccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-
Confidence 344555433 22468999999999999999999999997 899999999998888876763221 1000100011111
Q ss_pred CccEEEEcCCCCCChH-----HHHhccccCCeEEEEccC
Q 018382 244 SLDYIIDTVPANHPLE-----PYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 244 ~~d~v~d~~g~~~~~~-----~~~~~l~~~G~~v~~g~~ 277 (357)
.+|+++|++.....-. ....++++.-.+.++-..
T Consensus 190 ~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~ 228 (283)
T COG0169 190 EADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYN 228 (283)
T ss_pred ccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccC
Confidence 5999999886642111 014556666666665433
No 185
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.03 E-value=0.004 Score=56.20 Aligned_cols=96 Identities=21% Similarity=0.214 Sum_probs=61.8
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC---Cc-EEEcCCChhHHHHhhCCccEEEEcCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG---AD-QYLVSSDATRMQEAADSLDYIIDTVP 253 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g---~~-~vv~~~~~~~~~~~~~~~d~v~d~~g 253 (357)
.++++||-+|+|. |..++.+++ .|+ +|++++.++...+.+++... .. .+... ..+......+++|+|+....
T Consensus 158 ~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~-~~~~~~~~~~~fDlVvan~~ 234 (288)
T TIGR00406 158 LKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVK-LIYLEQPIEGKADVIVANIL 234 (288)
T ss_pred CCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEE-ecccccccCCCceEEEEecC
Confidence 5789999999876 777777665 466 89999999887766655332 11 11111 11111122358999986543
Q ss_pred CC---CChHHHHhccccCCeEEEEccC
Q 018382 254 AN---HPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 254 ~~---~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
.. ..+..+.+.|+++|.++..|..
T Consensus 235 ~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 235 AEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 32 2345677899999999877654
No 186
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.02 E-value=0.0024 Score=54.56 Aligned_cols=101 Identities=26% Similarity=0.318 Sum_probs=63.4
Q ss_pred hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHh---cCCcEE-EcCCChhHHHHhhCCc
Q 018382 172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEH---LGADQY-LVSSDATRMQEAADSL 245 (357)
Q Consensus 172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~v-v~~~~~~~~~~~~~~~ 245 (357)
+..+. +++|++||-+|+|. |+.++-+++..|. +|+.+...++-.+.+++. +|.+.+ +...+...-.....+|
T Consensus 65 l~~L~-l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~apf 142 (209)
T PF01135_consen 65 LEALD-LKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAPF 142 (209)
T ss_dssp HHHTT-C-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-SE
T ss_pred HHHHh-cCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCCc
Confidence 33344 59999999998753 7888888888775 688888887754444432 454322 2222221111123489
Q ss_pred cEEEEcCCCCCChHHHHhccccCCeEEEE
Q 018382 246 DYIIDTVPANHPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 274 (357)
|.|+-+.+-...-...++.|+++|++|..
T Consensus 143 D~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 143 DRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp EEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred CEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 99998877775567899999999999874
No 187
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.01 E-value=0.0011 Score=49.93 Aligned_cols=93 Identities=20% Similarity=0.116 Sum_probs=62.7
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChH
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLE 259 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 259 (357)
.+++|||+|+|.+|..-++.+...|++|+++++.. ...+ +.-... .+ .+ +....++++||.+.+....-+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~~-~~--~~-~~~l~~~~lV~~at~d~~~n~ 75 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQLI-RR--EF-EEDLDGADLVFAATDDPELNE 75 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEEE-ES--S--GGGCTTESEEEE-SS-HHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHHH-hh--hH-HHHHhhheEEEecCCCHHHHH
Confidence 57899999999999999999999999999999875 1111 221121 11 12 233458999999998874455
Q ss_pred HHHhccccCCeEEEEccCCCCcc
Q 018382 260 PYLSLLKLDGKLILTGVINTPMQ 282 (357)
Q Consensus 260 ~~~~~l~~~G~~v~~g~~~~~~~ 282 (357)
...+..+..|.++.....+...+
T Consensus 76 ~i~~~a~~~~i~vn~~D~p~~~d 98 (103)
T PF13241_consen 76 AIYADARARGILVNVVDDPELCD 98 (103)
T ss_dssp HHHHHHHHTTSEEEETT-CCCCS
T ss_pred HHHHHHhhCCEEEEECCCcCCCe
Confidence 66666777899998876554433
No 188
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.01 E-value=0.0057 Score=57.89 Aligned_cols=76 Identities=14% Similarity=0.114 Sum_probs=58.8
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP 257 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (357)
-.+.+|+|+|+|.+|.+++..+...|+ +++++.|+.++.+.+.+.++...++.. +.+......+|+||+|++.+..
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---~~l~~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---SELPQLIKKADIIIAAVNVLEY 255 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---HHHHHHhccCCEEEECcCCCCe
Confidence 467899999999999999999999997 799999998888877776763223322 2334445679999999998743
No 189
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.00 E-value=0.0033 Score=59.34 Aligned_cols=91 Identities=19% Similarity=0.117 Sum_probs=65.2
Q ss_pred EEEEecChHHHHHHHHHHHcC-C-eEEEEeCCcHHHHHHHHhcC----CcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382 184 GGILGLGGVGHMGVLIAKAMG-H-HVTVISSSDKKRVEAMEHLG----ADQYLVSSDATRMQEAADSLDYIIDTVPANHP 257 (357)
Q Consensus 184 VlI~G~g~~G~~ai~la~~~g-~-~V~~~~~~~~~~~~~~~~~g----~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (357)
|+|+|+|.+|..+++.+...+ . +|++.+++.++.+.+.+++. ....+|..+.+.+.++..+.|+|++|+|....
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~ 80 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG 80 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence 688999999999999998775 4 89999999999887765322 23446777777788888899999999998734
Q ss_pred hHHHHhccccCCeEEEE
Q 018382 258 LEPYLSLLKLDGKLILT 274 (357)
Q Consensus 258 ~~~~~~~l~~~G~~v~~ 274 (357)
...+..+++.+-.+++.
T Consensus 81 ~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 81 EPVARACIEAGVHYVDT 97 (386)
T ss_dssp HHHHHHHHHHT-EEEES
T ss_pred HHHHHHHHHhCCCeecc
Confidence 44566677777788884
No 190
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.00 E-value=0.0034 Score=53.42 Aligned_cols=115 Identities=17% Similarity=0.086 Sum_probs=67.3
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL 258 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (357)
.+++|||+|+|.+|...++.+...|++|+++.+... ....+.. -+.-. +..+ .+......++|+||-+++.. ..
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~-~~~i~-~~~~--~~~~~~l~~adlViaaT~d~-el 83 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVE-EGKIR-WKQK--EFEPSDIVDAFLVIAATNDP-RV 83 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHh-CCCEE-EEec--CCChhhcCCceEEEEcCCCH-HH
Confidence 578999999999999999888888999999876532 2222222 22111 1111 11122235799999999887 55
Q ss_pred HHHHhccccCCeEEEEccCCCCcccchHHHh-hccceEEEEe
Q 018382 259 EPYLSLLKLDGKLILTGVINTPMQFLTPMVM-LGRKAITGSF 299 (357)
Q Consensus 259 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~g~~ 299 (357)
+..+...+..+.++.........+|.....+ ...+++.-+.
T Consensus 84 N~~i~~~a~~~~lvn~~d~~~~~~f~~Pa~~~~g~l~iaIsT 125 (202)
T PRK06718 84 NEQVKEDLPENALFNVITDAESGNVVFPSALHRGKLTISVST 125 (202)
T ss_pred HHHHHHHHHhCCcEEECCCCccCeEEEeeEEEcCCeEEEEEC
Confidence 5544444455667666544333344333322 2334444433
No 191
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0055 Score=54.10 Aligned_cols=75 Identities=19% Similarity=0.137 Sum_probs=55.6
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhh-------CCccEEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAA-------DSLDYIID 250 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~-------~~~d~v~d 250 (357)
++++|||+|+ |++|.++++.+...|++|+++++++.+.+...+.++.. ...|..+++.++++. +++|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999987 99999999999999999999999877766555545532 234666654433322 36899999
Q ss_pred cCCC
Q 018382 251 TVPA 254 (357)
Q Consensus 251 ~~g~ 254 (357)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 8875
No 192
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.98 E-value=0.0052 Score=54.50 Aligned_cols=75 Identities=21% Similarity=0.166 Sum_probs=55.1
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHH----h---hCCccEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQE----A---ADSLDYI 248 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~----~---~~~~d~v 248 (357)
+++++||+|+ +++|.++++.+...|++|+++.+++++.+.+.++++.. ...|..+.+.++. + .+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5688999987 99999999999889999999999988877776655532 2235455433322 2 2369999
Q ss_pred EEcCCC
Q 018382 249 IDTVPA 254 (357)
Q Consensus 249 ~d~~g~ 254 (357)
++++|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999874
No 193
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.98 E-value=0.0077 Score=58.06 Aligned_cols=75 Identities=16% Similarity=0.209 Sum_probs=52.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc--HHHHHHHHhcCCc-EEEcCCChhHHHHhh-------CCccEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD--KKRVEAMEHLGAD-QYLVSSDATRMQEAA-------DSLDYI 248 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~--~~~~~~~~~~g~~-~vv~~~~~~~~~~~~-------~~~d~v 248 (357)
+++++||+|+ |++|.++++.+...|++|+++.++. ++...+.++++.. ..+|..+.+.++.+. +++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5789999987 9999999999999999999988743 3334444445643 335666654433322 268999
Q ss_pred EEcCCC
Q 018382 249 IDTVPA 254 (357)
Q Consensus 249 ~d~~g~ 254 (357)
|+++|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999884
No 194
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.97 E-value=0.0069 Score=54.46 Aligned_cols=97 Identities=19% Similarity=0.147 Sum_probs=63.8
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC----cEEEcCCChhHHHHhhCCccEEEEcCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA----DQYLVSSDATRMQEAADSLDYIIDTVP 253 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~----~~vv~~~~~~~~~~~~~~~d~v~d~~g 253 (357)
..+++|+|+|+|++|.+++..+...|+ +|+++.++.++.+.+.+.++. ..+.... .+.+....+|+|++|+.
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~~~aDiVInaTp 201 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAALAAADGLVHATP 201 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhhCCCCEEEECCc
Confidence 356889999999999999999999998 899999998888777665531 2222211 12223357999999964
Q ss_pred CCC----ChHHHHhccccCCeEEEEccCC
Q 018382 254 ANH----PLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 254 ~~~----~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
... ......+.+++...++++-..+
T Consensus 202 ~Gm~~~~~~~~~~~~l~~~~~v~DivY~P 230 (284)
T PRK12549 202 TGMAKHPGLPLPAELLRPGLWVADIVYFP 230 (284)
T ss_pred CCCCCCCCCCCCHHHcCCCcEEEEeeeCC
Confidence 321 0111224566666666664433
No 195
>PRK06484 short chain dehydrogenase; Validated
Probab=96.97 E-value=0.0093 Score=58.58 Aligned_cols=76 Identities=20% Similarity=0.221 Sum_probs=57.2
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHh----h---CCccE
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEA----A---DSLDY 247 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~----~---~~~d~ 247 (357)
..++++||+|+ +++|.+.++.+...|++|+++.+++++.+.+.+.++.. ...|..+++.++++ . +.+|+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45788999987 99999999999889999999999988877777656633 23455555433332 2 36999
Q ss_pred EEEcCCC
Q 018382 248 IIDTVPA 254 (357)
Q Consensus 248 v~d~~g~ 254 (357)
+|+++|.
T Consensus 347 li~nAg~ 353 (520)
T PRK06484 347 LVNNAGI 353 (520)
T ss_pred EEECCCC
Confidence 9999875
No 196
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0051 Score=54.15 Aligned_cols=74 Identities=22% Similarity=0.232 Sum_probs=52.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAADSLDYIIDTVPA 254 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~d~v~d~~g~ 254 (357)
.+++++|+|+ |++|.++++.+...|++|++++++......... .+.. ...|..+.+.+.+..+.+|++++++|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-ESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 4688999987 999999999998899999999887622211111 1211 234566666566666689999999975
No 197
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.94 E-value=0.0079 Score=53.75 Aligned_cols=106 Identities=18% Similarity=0.082 Sum_probs=67.9
Q ss_pred hhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---cEEEcCCChhHHHHhhCC
Q 018382 168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---DQYLVSSDATRMQEAADS 244 (357)
Q Consensus 168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~~ 244 (357)
...+|.......++++++|+|+|++|.+++..+...|.+|++..+++++.+.+.+.++. ...+... ......
T Consensus 104 ~~~~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~-----~~~~~~ 178 (270)
T TIGR00507 104 LVSDLERLIPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD-----ELPLHR 178 (270)
T ss_pred HHHHHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh-----hhcccC
Confidence 33344432332457889999999999999988888899999999988877666554432 1222111 112246
Q ss_pred ccEEEEcCCCCC--Ch---HHHHhccccCCeEEEEccCC
Q 018382 245 LDYIIDTVPANH--PL---EPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 245 ~d~v~d~~g~~~--~~---~~~~~~l~~~G~~v~~g~~~ 278 (357)
+|+|++|++... .. ......++++..++++...+
T Consensus 179 ~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 179 VDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred ccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence 999999998641 11 11234567777777775443
No 198
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.0055 Score=54.25 Aligned_cols=77 Identities=18% Similarity=0.217 Sum_probs=55.9
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc----EEEcCCChhHHHHh-------hCCcc
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD----QYLVSSDATRMQEA-------ADSLD 246 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~-------~~~~d 246 (357)
-+++++||+|+ |.+|..+++.+...|++|+++.++++..+.+.+..+.. ...|..+++.+.+. ..++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 46789999987 99999999999999999999999877666655433322 23455555443322 24799
Q ss_pred EEEEcCCCC
Q 018382 247 YIIDTVPAN 255 (357)
Q Consensus 247 ~v~d~~g~~ 255 (357)
+||.++|..
T Consensus 89 ~vi~~ag~~ 97 (264)
T PRK12829 89 VLVNNAGIA 97 (264)
T ss_pred EEEECCCCC
Confidence 999988754
No 199
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.91 E-value=0.0071 Score=53.62 Aligned_cols=75 Identities=19% Similarity=0.087 Sum_probs=54.0
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHH----Hhh---CCccEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQ----EAA---DSLDYI 248 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~----~~~---~~~d~v 248 (357)
++++++|+|+ |++|.++++.+...|++|+++.+++++.+.+.+..+.. ...|..+.+.+. ++. +.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4789999987 99999999999889999999999887776666544422 123555543322 222 378999
Q ss_pred EEcCCC
Q 018382 249 IDTVPA 254 (357)
Q Consensus 249 ~d~~g~ 254 (357)
++++|.
T Consensus 84 i~~Ag~ 89 (262)
T TIGR03325 84 IPNAGI 89 (262)
T ss_pred EECCCC
Confidence 999873
No 200
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.005 Score=55.76 Aligned_cols=76 Identities=17% Similarity=0.232 Sum_probs=53.6
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc-E--EEcCCChhHHHHhh-------CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD-Q--YLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--vv~~~~~~~~~~~~-------~~~ 245 (357)
.++++||+|+ |++|.+.++.+...|++|++++++.++.+.+.+.+ +.+ . ..|..+.+.+.+.. +.+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999987 99999999988888999999999987765554322 322 1 23555544333322 378
Q ss_pred cEEEEcCCCC
Q 018382 246 DYIIDTVPAN 255 (357)
Q Consensus 246 d~v~d~~g~~ 255 (357)
|++++++|..
T Consensus 119 d~li~~AG~~ 128 (293)
T PRK05866 119 DILINNAGRS 128 (293)
T ss_pred CEEEECCCCC
Confidence 9999998753
No 201
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0076 Score=52.82 Aligned_cols=75 Identities=19% Similarity=0.148 Sum_probs=54.4
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHH----Hh---hCCccEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQ----EA---ADSLDYI 248 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~----~~---~~~~d~v 248 (357)
++++++|+|+ |++|.+.++.+...|++|+++++++++.+.+.++++... ..|..+.+.+. .+ .+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999987 999999999999999999999998777666665566432 13444433222 22 2378999
Q ss_pred EEcCCC
Q 018382 249 IDTVPA 254 (357)
Q Consensus 249 ~d~~g~ 254 (357)
|.++|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999875
No 202
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.88 E-value=0.0097 Score=54.69 Aligned_cols=99 Identities=17% Similarity=0.167 Sum_probs=68.1
Q ss_pred hccCCCCCCCeEEEEecChHHHHHHHHH-HHcCC-eEEEEeCCcHHHHHHHHhc----CCcEEEcCCChhHHHHhhCCcc
Q 018382 173 SHFGLKQSGLRGGILGLGGVGHMGVLIA-KAMGH-HVTVISSSDKKRVEAMEHL----GADQYLVSSDATRMQEAADSLD 246 (357)
Q Consensus 173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la-~~~g~-~V~~~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~~~d 246 (357)
..+.+ ...++++|+|+|..|.+.+..+ ...++ +|.+..+++++.+.+.+++ +... ....+ .++.....|
T Consensus 120 ~~la~-~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~~~---~~~~~~~aD 194 (325)
T PRK08618 120 KYLAR-EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVVNS---ADEAIEEAD 194 (325)
T ss_pred HHhcC-CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEeCC---HHHHHhcCC
Confidence 44444 4567899999999998777554 45677 7888889888877665533 4331 12222 233446899
Q ss_pred EEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 247 YIIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
+|+.|++..... .. +.++++-.+..+|...
T Consensus 195 iVi~aT~s~~p~-i~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKTPV-FS-EKLKKGVHINAVGSFM 224 (325)
T ss_pred EEEEccCCCCcc-hH-HhcCCCcEEEecCCCC
Confidence 999999887433 34 8889988888888754
No 203
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.87 E-value=0.0087 Score=53.88 Aligned_cols=86 Identities=16% Similarity=0.208 Sum_probs=53.7
Q ss_pred hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc---HHHHHHHHhcCCc-----EEEcCCChhHHHH
Q 018382 170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD---KKRVEAMEHLGAD-----QYLVSSDATRMQE 240 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~---~~~~~~~~~~g~~-----~vv~~~~~~~~~~ 240 (357)
.+|...+.--+++++||+|+|+.+.+++..+...|+ +++++.|++ ++.+.+.+.++.. .+....+.+.+.+
T Consensus 113 ~~l~~~~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~ 192 (288)
T PRK12749 113 RAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAE 192 (288)
T ss_pred HHHHhcCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhh
Confidence 344433321366899999999999987777777898 899999984 3666665545421 1222111111223
Q ss_pred hhCCccEEEEcCCCC
Q 018382 241 AADSLDYIIDTVPAN 255 (357)
Q Consensus 241 ~~~~~d~v~d~~g~~ 255 (357)
....+|+|++++.-.
T Consensus 193 ~~~~aDivINaTp~G 207 (288)
T PRK12749 193 ALASADILTNGTKVG 207 (288)
T ss_pred hcccCCEEEECCCCC
Confidence 334799999987543
No 204
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.011 Score=51.90 Aligned_cols=97 Identities=15% Similarity=0.195 Sum_probs=61.6
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHh---cCCc---EEEcCCChhHHHHh----h---CC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEH---LGAD---QYLVSSDATRMQEA----A---DS 244 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~---~g~~---~vv~~~~~~~~~~~----~---~~ 244 (357)
+++++||+|+ |++|..+++.+...|.+|+++.++.+ +.+.+... .+.. ...|..+++.++.+ . ++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4678999987 99999999998888999999888653 33322221 2322 12355555443322 1 36
Q ss_pred ccEEEEcCCCCC-------------------ChHHHHhccccCCeEEEEcc
Q 018382 245 LDYIIDTVPANH-------------------PLEPYLSLLKLDGKLILTGV 276 (357)
Q Consensus 245 ~d~v~d~~g~~~-------------------~~~~~~~~l~~~G~~v~~g~ 276 (357)
+|+++.+++... .++.+...+...|+++.++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 899998876421 22334445556688887754
No 205
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0073 Score=53.88 Aligned_cols=75 Identities=19% Similarity=0.231 Sum_probs=54.8
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-Cc-EEEcCCChhHHHH----h---hCCccEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-AD-QYLVSSDATRMQE----A---ADSLDYII 249 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~----~---~~~~d~v~ 249 (357)
.++++||+|+ |++|..+++.+...|++|+++.+++++.+.+.+.++ .. ...|..+++.+.+ + .+++|+++
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3578999987 999999999888889999999998887766655455 22 2246566543322 2 24789999
Q ss_pred EcCCC
Q 018382 250 DTVPA 254 (357)
Q Consensus 250 d~~g~ 254 (357)
+++|.
T Consensus 84 ~~ag~ 88 (273)
T PRK07825 84 NNAGV 88 (273)
T ss_pred ECCCc
Confidence 99875
No 206
>PLN00203 glutamyl-tRNA reductase
Probab=96.84 E-value=0.0093 Score=58.03 Aligned_cols=97 Identities=18% Similarity=0.235 Sum_probs=65.4
Q ss_pred CCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382 181 GLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP-- 257 (357)
Q Consensus 181 ~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~-- 257 (357)
+.+|+|+|+|.+|.+++..+...|+ +|+++.++.++.+.+.+.++...+ .....+.........|+||.|++....
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~~aDVVIsAT~s~~pvI 344 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAAEADVVFTSTSSETPLF 344 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHhcCCEEEEccCCCCCee
Confidence 6889999999999999999999998 799999999988887776752111 111112233445689999999877533
Q ss_pred hHHHHhcccc----CC---eEEEEccCC
Q 018382 258 LEPYLSLLKL----DG---KLILTGVIN 278 (357)
Q Consensus 258 ~~~~~~~l~~----~G---~~v~~g~~~ 278 (357)
....++.+.+ .| .+++++.+.
T Consensus 345 ~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 345 LKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred CHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 2334443322 12 366676653
No 207
>PRK06196 oxidoreductase; Provisional
Probab=96.81 E-value=0.0085 Score=54.82 Aligned_cols=75 Identities=20% Similarity=0.232 Sum_probs=54.0
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-Cc-EEEcCCChhHHHHh----h---CCccEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-AD-QYLVSSDATRMQEA----A---DSLDYII 249 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~~----~---~~~d~v~ 249 (357)
.++++||+|+ |++|.+++..+...|++|++++++.++.+.+.+.+. .. ...|..+.+.+++. . +++|+++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 4678999987 999999999888889999999998877665544333 21 22455555443332 2 3799999
Q ss_pred EcCCC
Q 018382 250 DTVPA 254 (357)
Q Consensus 250 d~~g~ 254 (357)
+++|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99874
No 208
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.0081 Score=53.33 Aligned_cols=75 Identities=16% Similarity=0.205 Sum_probs=53.7
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc-E--EEcCCChhHHHHh-------hCCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD-Q--YLVSSDATRMQEA-------ADSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--vv~~~~~~~~~~~-------~~~~ 245 (357)
+++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+ +.. + ..|..+.+.+.++ .+++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999987 89999999999889999999999877665544322 321 1 2455555443322 1378
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++|+++|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999999874
No 209
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.80 E-value=0.0078 Score=58.61 Aligned_cols=72 Identities=14% Similarity=0.102 Sum_probs=53.7
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN 255 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~ 255 (357)
.++++|+|+|.|..|++++++++..|++|++.+..+.+.+.+++ +|...+...+..+ ....+|+|+.+.|-.
T Consensus 10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~-~g~~~~~~~~~~~----~l~~~D~VV~SpGi~ 81 (488)
T PRK03369 10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPHAE-RGVATVSTSDAVQ----QIADYALVVTSPGFR 81 (488)
T ss_pred cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHh-CCCEEEcCcchHh----HhhcCCEEEECCCCC
Confidence 57899999999999999999999999999998877666555555 7874332212111 223679999988875
No 210
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.0096 Score=52.92 Aligned_cols=75 Identities=15% Similarity=0.139 Sum_probs=53.7
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCc---EEEcCCChhHHHHh----h--CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GAD---QYLVSSDATRMQEA----A--DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~---~vv~~~~~~~~~~~----~--~~~ 245 (357)
+++++||+|+ +++|.++++.+...|++|++++++.++.+.+.+++ +.+ ...|..+++.++++ . +++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 5788999987 99999999999999999999999877765554432 322 22455554433332 2 369
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++++++|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999999875
No 211
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0078 Score=53.27 Aligned_cols=75 Identities=19% Similarity=0.178 Sum_probs=53.4
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc-----CCc---EEEcCCChhHHHHh-------hC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL-----GAD---QYLVSSDATRMQEA-------AD 243 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~vv~~~~~~~~~~~-------~~ 243 (357)
.++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+++ +.. ...|..+++.+++. .+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4688999987 99999999999899999999999887766554433 211 12355554433322 13
Q ss_pred CccEEEEcCCC
Q 018382 244 SLDYIIDTVPA 254 (357)
Q Consensus 244 ~~d~v~d~~g~ 254 (357)
++|++++++|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999999884
No 212
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.78 E-value=0.019 Score=44.20 Aligned_cols=95 Identities=15% Similarity=0.182 Sum_probs=63.1
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHH---hcCCc--EEEcCCChhHHHHhhCCccEEEEcC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAME---HLGAD--QYLVSSDATRMQEAADSLDYIIDTV 252 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~---~~g~~--~vv~~~~~~~~~~~~~~~d~v~d~~ 252 (357)
.++++|+-+|+|. |..+..+++..+ .+|+.++.++...+.+++ .++.. .++..+...........+|+|+...
T Consensus 18 ~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~ 96 (124)
T TIGR02469 18 RPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFIGG 96 (124)
T ss_pred CCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEECC
Confidence 6678899999866 888888888765 599999998887666543 24432 2222221111222335899998754
Q ss_pred CCC---CChHHHHhccccCCeEEEE
Q 018382 253 PAN---HPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 253 g~~---~~~~~~~~~l~~~G~~v~~ 274 (357)
+.. ..++.+.+.|+++|.++..
T Consensus 97 ~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 97 SGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred cchhHHHHHHHHHHHcCCCCEEEEE
Confidence 332 2567788999999998864
No 213
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.76 E-value=0.017 Score=51.44 Aligned_cols=102 Identities=13% Similarity=0.182 Sum_probs=66.2
Q ss_pred hhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCc
Q 018382 167 TVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSL 245 (357)
Q Consensus 167 ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~ 245 (357)
....+|...+. ..+++++|+|+|+.+.+++..+...|+ +|+++.|+.++.+.+.+.++... . ... ....+
T Consensus 109 Gf~~~L~~~~~-~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~--~~~--~~~~~ 179 (272)
T PRK12550 109 AIAKLLASYQV-PPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R--PDL--GGIEA 179 (272)
T ss_pred HHHHHHHhcCC-CCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h--hhc--ccccC
Confidence 33445544443 456789999999999999999999998 79999999998887777565221 0 001 12358
Q ss_pred cEEEEcCCCCCC-------hHHHHhccccCCeEEEEccC
Q 018382 246 DYIIDTVPANHP-------LEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 246 d~v~d~~g~~~~-------~~~~~~~l~~~G~~v~~g~~ 277 (357)
|+|++|+.-... .......+++...++++-..
T Consensus 180 dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~ 218 (272)
T PRK12550 180 DILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVAL 218 (272)
T ss_pred CEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecC
Confidence 999999864310 01123346666666665443
No 214
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.76 E-value=0.01 Score=53.23 Aligned_cols=76 Identities=14% Similarity=0.212 Sum_probs=52.8
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC----CcEEEcCCChhHHHHhhCCccEEEEcCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG----ADQYLVSSDATRMQEAADSLDYIIDTVP 253 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g----~~~vv~~~~~~~~~~~~~~~d~v~d~~g 253 (357)
..+++++|+|+|+.+.+++..+...|+ +++++.|+.++.+.+.+.+. ...+. ..+..........+|+|+|++.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~-~~~~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV-GVDARGIEDVIAAADGVVNATP 203 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE-ecCHhHHHHHHhhcCEEEEcCC
Confidence 347899999999999999988888998 89999999888877766443 21111 1111111222346999999876
Q ss_pred CC
Q 018382 254 AN 255 (357)
Q Consensus 254 ~~ 255 (357)
-.
T Consensus 204 ~G 205 (283)
T PRK14027 204 MG 205 (283)
T ss_pred CC
Confidence 43
No 215
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.0082 Score=53.27 Aligned_cols=75 Identities=15% Similarity=0.213 Sum_probs=53.2
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CC-c---EEEcCCChhHHHH----hh---C
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GA-D---QYLVSSDATRMQE----AA---D 243 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~-~---~vv~~~~~~~~~~----~~---~ 243 (357)
.++++||+|+ +++|.+.++.+...|++|+++++++++.+...+.+ +. . ...|..+.+.+.+ +. +
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4788999987 99999999999999999999999887655443322 21 1 1235555543332 22 3
Q ss_pred CccEEEEcCCC
Q 018382 244 SLDYIIDTVPA 254 (357)
Q Consensus 244 ~~d~v~d~~g~ 254 (357)
++|++++++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999999985
No 216
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.01 Score=52.33 Aligned_cols=74 Identities=20% Similarity=0.140 Sum_probs=53.4
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhh-CCccEEEEcC
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAA-DSLDYIIDTV 252 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~-~~~d~v~d~~ 252 (357)
++++||+|+ |++|..+++.+...|++|+++++++++...+.+. .+.. ...|..+.+.+.... .++|++|.++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 457999987 9999999999999999999999987655444331 2321 224666655555544 3899999998
Q ss_pred CC
Q 018382 253 PA 254 (357)
Q Consensus 253 g~ 254 (357)
|.
T Consensus 82 g~ 83 (257)
T PRK09291 82 GI 83 (257)
T ss_pred Cc
Confidence 74
No 217
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.0078 Score=55.06 Aligned_cols=75 Identities=20% Similarity=0.197 Sum_probs=52.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----C-Cc---EEEcCCChhHHHHh-------hC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----G-AD---QYLVSSDATRMQEA-------AD 243 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g-~~---~vv~~~~~~~~~~~-------~~ 243 (357)
.+++++|+|+ +++|.++++.+...|++|+++++++++.+.+.+++ + .. ..+|..+.+.+++. .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4688999987 99999999988888999999999887665443322 2 11 12466565443332 13
Q ss_pred CccEEEEcCCC
Q 018382 244 SLDYIIDTVPA 254 (357)
Q Consensus 244 ~~d~v~d~~g~ 254 (357)
.+|++++++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 69999998874
No 218
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.73 E-value=0.012 Score=55.49 Aligned_cols=75 Identities=15% Similarity=0.160 Sum_probs=54.6
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC--C-cEEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG--A-DQYLVSSDATRMQEAADSLDYIIDTVPA 254 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g--~-~~vv~~~~~~~~~~~~~~~d~v~d~~g~ 254 (357)
.+++++|+|+ |++|.++++.+...|++|+++++++++.....+..+ . ....|..+.+.+.+..+++|++++++|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 4789999987 999999999888889999999987665543322112 1 1224666666666666789999998875
No 219
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=96.73 E-value=0.013 Score=53.85 Aligned_cols=94 Identities=16% Similarity=0.180 Sum_probs=63.8
Q ss_pred CCCCeEEEEecChHHHHHHHHHH-HcCC-eEEEEeCCcHHHHHHHHhc----CCcEEEcCCChhHHHHhhCCccEEEEcC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAK-AMGH-HVTVISSSDKKRVEAMEHL----GADQYLVSSDATRMQEAADSLDYIIDTV 252 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~-~~g~-~V~~~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~~~d~v~d~~ 252 (357)
+..++++|+|+|..|.+.+..+. ..+. +|++..++.++.+.+.+++ |.+ +.... .+++.....|+|+.|+
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~---~~~~av~~aDiVvtaT 202 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAAT---DPRAAMSGADIIVTTT 202 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeC---CHHHHhccCCEEEEec
Confidence 45678999999999988877776 4676 7999999988877665544 432 22122 2334446899999998
Q ss_pred CCCCChHHHHhccccCCeEEEEccC
Q 018382 253 PANHPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 253 g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
+....+- ..+.++++-.+..+|..
T Consensus 203 ~s~~p~i-~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 203 PSETPIL-HAEWLEPGQHVTAMGSD 226 (326)
T ss_pred CCCCcEe-cHHHcCCCcEEEeeCCC
Confidence 8753321 22457787777777754
No 220
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.0088 Score=52.70 Aligned_cols=75 Identities=16% Similarity=0.190 Sum_probs=54.0
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh-------hCCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA-------ADSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~~~ 245 (357)
.++++||+|+ |++|.++++.+...|++|+++.++.++.+.+.+++ +.+ ...|..+++.++++ .+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999987 99999999999999999999999887766554433 321 22455554433332 2479
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++++++|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999998874
No 221
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.013 Score=51.95 Aligned_cols=76 Identities=16% Similarity=0.227 Sum_probs=53.6
Q ss_pred CCCCeEEEEec-C-hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh----cCCcEE----EcCCChhHHHHhh------
Q 018382 179 QSGLRGGILGL-G-GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH----LGADQY----LVSSDATRMQEAA------ 242 (357)
Q Consensus 179 ~~~~~VlI~G~-g-~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~----~g~~~v----v~~~~~~~~~~~~------ 242 (357)
.+++++||+|+ | ++|.++++.+...|++|+++++++++.+...+. +|...+ .|..+.+.++++.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45789999986 6 799999999999999999999887765544332 443222 3555544333221
Q ss_pred -CCccEEEEcCCC
Q 018382 243 -DSLDYIIDTVPA 254 (357)
Q Consensus 243 -~~~d~v~d~~g~ 254 (357)
+.+|++|+++|.
T Consensus 95 ~g~id~li~~ag~ 107 (262)
T PRK07831 95 LGRLDVLVNNAGL 107 (262)
T ss_pred cCCCCEEEECCCC
Confidence 378999999985
No 222
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.71 E-value=0.0098 Score=52.13 Aligned_cols=75 Identities=17% Similarity=0.188 Sum_probs=53.8
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC--C---cEEEcCCChhHHHHhh-------CCcc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG--A---DQYLVSSDATRMQEAA-------DSLD 246 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g--~---~~vv~~~~~~~~~~~~-------~~~d 246 (357)
+++++||+|+ |.+|..+++.+...|++|+++++++++.+.+...+. . -...|..+.+.+..+. ..+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999987 999999999988889999999999877665544333 1 1223555554443321 3689
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
++|.++|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999875
No 223
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.0074 Score=53.64 Aligned_cols=76 Identities=20% Similarity=0.201 Sum_probs=52.5
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh-------hCC
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA-------ADS 244 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~~ 244 (357)
-+++++||+|+ |++|..+++.+...|++|+++++++++.....+.+ +.. ..+|..+.+.+.+. .++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999987 99999999999889999999998877654433222 322 12455554433332 136
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++|.++|.
T Consensus 87 iD~vi~~ag~ 96 (264)
T PRK07576 87 IDVLVSGAAG 96 (264)
T ss_pred CCEEEECCCC
Confidence 8999988763
No 224
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.69 E-value=0.0083 Score=60.46 Aligned_cols=75 Identities=17% Similarity=0.167 Sum_probs=56.2
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH---------------------HHHHHHHhcCCcEEEcCCC--hh
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK---------------------KRVEAMEHLGADQYLVSSD--AT 236 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~---------------------~~~~~~~~~g~~~vv~~~~--~~ 236 (357)
.+++|+|+|+|+.|+.++..++..|.+|++..+.+. +.+++++ +|.+..++..- .-
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTA-MGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHH-CCeEEEcCCccCCcC
Confidence 489999999999999999999999999999886652 3445555 88776555432 11
Q ss_pred HHHHhhCCccEEEEcCCCC
Q 018382 237 RMQEAADSLDYIIDTVPAN 255 (357)
Q Consensus 237 ~~~~~~~~~d~v~d~~g~~ 255 (357)
.++.+..++|.||.++|..
T Consensus 388 ~~~~l~~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSDLTSEYDAVFIGVGTY 406 (639)
T ss_pred CHHHHHhcCCEEEEeCCCC
Confidence 2344556899999999875
No 225
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.03 Score=49.92 Aligned_cols=72 Identities=19% Similarity=0.263 Sum_probs=50.5
Q ss_pred eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc----EEEcCCChhHHHHh-------hCCccE
Q 018382 183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD----QYLVSSDATRMQEA-------ADSLDY 247 (357)
Q Consensus 183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~----~vv~~~~~~~~~~~-------~~~~d~ 247 (357)
+++|+|+ |++|..+++.+...|++|+++.+++++.+...++ .+.. ...|..+.+.+.+. .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 6899987 9999999999988999999999887665444322 3322 23566665443322 136899
Q ss_pred EEEcCCC
Q 018382 248 IIDTVPA 254 (357)
Q Consensus 248 v~d~~g~ 254 (357)
+++++|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999975
No 226
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.69 E-value=0.017 Score=52.69 Aligned_cols=95 Identities=22% Similarity=0.290 Sum_probs=65.5
Q ss_pred CCCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHH---hcCCcEEEcCCChhHHHHh--hCCccEEEE
Q 018382 178 KQSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAME---HLGADQYLVSSDATRMQEA--ADSLDYIID 250 (357)
Q Consensus 178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~~~--~~~~d~v~d 250 (357)
++++++||.+|+| .|..++.+++..+. +|++++.+++..+.+++ ..|.+.+..... +..+.. ...+|+|+.
T Consensus 78 i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D~~~~~~~~~~fD~Ii~ 155 (322)
T PRK13943 78 LDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-DGYYGVPEFAPYDVIFV 155 (322)
T ss_pred CCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-ChhhcccccCCccEEEE
Confidence 3789999999997 59999999988764 69999998876555443 256543321111 111111 147999998
Q ss_pred cCCCCCChHHHHhccccCCeEEEE
Q 018382 251 TVPANHPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~ 274 (357)
+.+.........+.++++|+++..
T Consensus 156 ~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 156 TVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCchHHhHHHHHHhcCCCCEEEEE
Confidence 877654556788899999998763
No 227
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.68 E-value=0.029 Score=49.33 Aligned_cols=75 Identities=19% Similarity=0.278 Sum_probs=52.8
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh-------CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~~~ 245 (357)
+++++||+|+ |.+|...++.+...|.+|++++++.++.+.+...+ +.. ...|..+.+.+.+.. +++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 99999999988888999999999887665443322 322 233555554433321 379
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++|.+++.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999998874
No 228
>PRK05717 oxidoreductase; Validated
Probab=96.68 E-value=0.013 Score=51.65 Aligned_cols=76 Identities=17% Similarity=0.216 Sum_probs=54.0
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHH----Hhh---CCccE
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQ----EAA---DSLDY 247 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~----~~~---~~~d~ 247 (357)
..++++||+|+ |.+|..++..+...|++|+++++++++.....+.++.. ...|..+.+.+. ++. +.+|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 35788999987 99999999999888999999988876665555545532 224555544332 222 36899
Q ss_pred EEEcCCC
Q 018382 248 IIDTVPA 254 (357)
Q Consensus 248 v~d~~g~ 254 (357)
+|.++|.
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9999875
No 229
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.011 Score=52.88 Aligned_cols=76 Identities=20% Similarity=0.184 Sum_probs=54.8
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHhh-------CCccEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEAA-------DSLDYI 248 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~-------~~~d~v 248 (357)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+..+.. ...|..+.+.+.+.. +++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3567999987 99999999999888999999999888776665533321 123555554433321 368999
Q ss_pred EEcCCCC
Q 018382 249 IDTVPAN 255 (357)
Q Consensus 249 ~d~~g~~ 255 (357)
++++|..
T Consensus 83 v~~ag~~ 89 (277)
T PRK06180 83 VNNAGYG 89 (277)
T ss_pred EECCCcc
Confidence 9998863
No 230
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.66 E-value=0.011 Score=52.07 Aligned_cols=75 Identities=20% Similarity=0.248 Sum_probs=53.0
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc-E--EEcCCChhHHHHhh-------CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD-Q--YLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--vv~~~~~~~~~~~~-------~~~ 245 (357)
.++++||+|+ |.+|.++++.+...|++|+++.+++++.+.+.+.+ |.. . ..|..+.+.++++. +.+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999987 99999999988888999999999877655443322 321 1 23555544433322 368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999875
No 231
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.011 Score=52.17 Aligned_cols=76 Identities=20% Similarity=0.265 Sum_probs=54.0
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---C-CcE--EEcCCChhHHHHh-------hCC
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---G-ADQ--YLVSSDATRMQEA-------ADS 244 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g-~~~--vv~~~~~~~~~~~-------~~~ 244 (357)
..++++||+|+ |.+|.+++..+...|++|+++.+++++.+.+...+ + ..+ ..|..+.+.+++. .+.
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 35789999987 99999999999989999999999888766554422 2 112 2344444433332 236
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++++++|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999999884
No 232
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.65 E-value=0.019 Score=52.21 Aligned_cols=100 Identities=11% Similarity=0.083 Sum_probs=69.5
Q ss_pred hccCCCCCCCeEEEEecChHHHHHHHHHHH-cCC-eEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhhCCccEE
Q 018382 173 SHFGLKQSGLRGGILGLGGVGHMGVLIAKA-MGH-HVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAADSLDYI 248 (357)
Q Consensus 173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la~~-~g~-~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~d~v 248 (357)
...+. ....+++|+|+|..|.+.+..+.. .+. +|.+..++.++.+.+.+++... .+. . +..++....+|+|
T Consensus 118 ~~La~-~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~---~~~~~av~~aDiV 192 (304)
T PRK07340 118 RTLAP-APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P---LDGEAIPEAVDLV 192 (304)
T ss_pred HHhCC-CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E---CCHHHHhhcCCEE
Confidence 44444 566789999999999998888864 566 7889999988877776656421 111 1 1233444689999
Q ss_pred EEcCCCCCChHHHHhccccCCeEEEEccCCC
Q 018382 249 IDTVPANHPLEPYLSLLKLDGKLILTGVINT 279 (357)
Q Consensus 249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 279 (357)
+.|+.+...+-.. .++++-.+..+|....
T Consensus 193 itaT~s~~Pl~~~--~~~~g~hi~~iGs~~p 221 (304)
T PRK07340 193 VTATTSRTPVYPE--AARAGRLVVAVGAFTP 221 (304)
T ss_pred EEccCCCCceeCc--cCCCCCEEEecCCCCC
Confidence 9998886544333 3788888888887543
No 233
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.65 E-value=0.0097 Score=54.59 Aligned_cols=74 Identities=22% Similarity=0.211 Sum_probs=53.2
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---c-E--EEcCCChhHHHHhh-------CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---D-Q--YLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---~-~--vv~~~~~~~~~~~~-------~~~ 245 (357)
+++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+.+.. . . ..|..+.+.+++.. ..+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 5678999987 9999999998888899999999988876665554421 1 1 23555544333321 259
Q ss_pred cEEEEcCC
Q 018382 246 DYIIDTVP 253 (357)
Q Consensus 246 d~v~d~~g 253 (357)
|++|+++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999987
No 234
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.64 E-value=0.015 Score=51.03 Aligned_cols=75 Identities=20% Similarity=0.207 Sum_probs=52.5
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHH----hh---CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQE----AA---DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~----~~---~~~ 245 (357)
+++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+. .+.. ..+|..+.+.+++ +. +++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999987 9999999999988999999999987765544332 3432 2345444433322 22 368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++|.++|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999874
No 235
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.011 Score=52.98 Aligned_cols=75 Identities=17% Similarity=0.155 Sum_probs=53.2
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHHh-------hCCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQEA-------ADSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~~~ 245 (357)
.++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+ |.+. ..|..+.+.+.++ .+.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 99999999999889999999998877665544322 3221 2355555443332 2368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++|+++|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999999874
No 236
>PRK06194 hypothetical protein; Provisional
Probab=96.64 E-value=0.013 Score=52.71 Aligned_cols=76 Identities=21% Similarity=0.278 Sum_probs=52.8
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHHhh-------CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------~~~ 245 (357)
.++++||+|+ |++|..+++.+...|++|++++++.++.+...+.+ +... ..|..+.+.++++. +++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999987 99999999988888999999998876655443322 3221 23555544443332 368
Q ss_pred cEEEEcCCCC
Q 018382 246 DYIIDTVPAN 255 (357)
Q Consensus 246 d~v~d~~g~~ 255 (357)
|++|+++|..
T Consensus 85 d~vi~~Ag~~ 94 (287)
T PRK06194 85 HLLFNNAGVG 94 (287)
T ss_pred CEEEECCCCC
Confidence 9999998863
No 237
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.63 E-value=0.026 Score=47.93 Aligned_cols=82 Identities=18% Similarity=0.133 Sum_probs=57.2
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL 258 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (357)
-.|++++|+|.|.+|..+++.+...|++|++++++.++.+.+.+.+|+.. ++.. +. ....+|+++-|+......
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~--~l---~~~~~Dv~vp~A~~~~I~ 99 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV-VAPE--EI---YSVDADVFAPCALGGVIN 99 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-Ecch--hh---ccccCCEEEecccccccC
Confidence 36789999999999999999999999999999998888877777567543 3321 11 112577777665444233
Q ss_pred HHHHhccc
Q 018382 259 EPYLSLLK 266 (357)
Q Consensus 259 ~~~~~~l~ 266 (357)
...++.++
T Consensus 100 ~~~~~~l~ 107 (200)
T cd01075 100 DDTIPQLK 107 (200)
T ss_pred HHHHHHcC
Confidence 44445554
No 238
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.011 Score=52.06 Aligned_cols=75 Identities=16% Similarity=0.197 Sum_probs=53.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE---EEcCCChhHHHHh----h---CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ---YLVSSDATRMQEA----A---DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~----~---~~~ 245 (357)
+++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+++ +.+. ..|..+++.++++ . +.+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999987 99999999998889999999999887766554432 3221 2355554433322 1 379
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|+++.++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999875
No 239
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.63 E-value=0.014 Score=52.15 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=51.3
Q ss_pred CCCeEEEEecC---hHHHHHHHHHHHcCCeEEEEeCCcHH---HHHHHHhcCCcE--EEcCCChhHHHHh----h---CC
Q 018382 180 SGLRGGILGLG---GVGHMGVLIAKAMGHHVTVISSSDKK---RVEAMEHLGADQ--YLVSSDATRMQEA----A---DS 244 (357)
Q Consensus 180 ~~~~VlI~G~g---~~G~~ai~la~~~g~~V~~~~~~~~~---~~~~~~~~g~~~--vv~~~~~~~~~~~----~---~~ 244 (357)
+++++||+|++ ++|.++++.+...|++|+++.+++.. .+.+.++.|... ..|..+.+.++++ . +.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 56889999874 89999999998899999998876532 233333355332 2455555433332 2 37
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++++++|.
T Consensus 86 iD~lVnnAG~ 95 (271)
T PRK06505 86 LDFVVHAIGF 95 (271)
T ss_pred CCEEEECCcc
Confidence 9999999874
No 240
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.62 E-value=0.0069 Score=56.90 Aligned_cols=112 Identities=20% Similarity=0.157 Sum_probs=72.1
Q ss_pred ccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHH
Q 018382 161 LLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQE 240 (357)
Q Consensus 161 ~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~ 240 (357)
+..+-...+..+.....++++++||.+|+| .|..++.+++..|++|++++.+++..+.+++...... +.....+ ...
T Consensus 148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~-v~~~~~D-~~~ 224 (383)
T PRK11705 148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLP-VEIRLQD-YRD 224 (383)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCe-EEEEECc-hhh
Confidence 333334444444333444899999999985 5677788888889999999999998888877442111 1111111 122
Q ss_pred hhCCccEEEEc-----CCCC---CChHHHHhccccCCeEEEEc
Q 018382 241 AADSLDYIIDT-----VPAN---HPLEPYLSLLKLDGKLILTG 275 (357)
Q Consensus 241 ~~~~~d~v~d~-----~g~~---~~~~~~~~~l~~~G~~v~~g 275 (357)
+.+.+|.|+.. ++.. ..++.+.+.|+|+|.++...
T Consensus 225 l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 225 LNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred cCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 34579988743 3331 24677888999999988753
No 241
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.62 E-value=0.023 Score=50.90 Aligned_cols=86 Identities=15% Similarity=0.221 Sum_probs=61.4
Q ss_pred hhhhccCCCCCCCeEEEEecCh-HHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEE
Q 018382 170 SPLSHFGLKQSGLRGGILGLGG-VGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYI 248 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~g~-~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v 248 (357)
..|+..+.--.|++|+|+|.|+ +|..++.++...|++|++..+. ... +.+....+|+|
T Consensus 148 ~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~---t~~------------------L~~~~~~aDIv 206 (283)
T PRK14192 148 RLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR---TQN------------------LPELVKQADII 206 (283)
T ss_pred HHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC---chh------------------HHHHhccCCEE
Confidence 3444444446789999999976 9999999999999988776652 111 12223578999
Q ss_pred EEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 249 IDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
++++|.+..+ ..+.++++-.+++++...
T Consensus 207 I~AtG~~~~v--~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 207 VGAVGKPELI--KKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred EEccCCCCcC--CHHHcCCCCEEEEEEEee
Confidence 9999876433 346688888888887654
No 242
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.012 Score=51.24 Aligned_cols=75 Identities=23% Similarity=0.179 Sum_probs=52.7
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---cEE--EcCCChhHHHH----hh---CCcc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---DQY--LVSSDATRMQE----AA---DSLD 246 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---~~v--v~~~~~~~~~~----~~---~~~d 246 (357)
++.+++|+|+ |.+|..+++.+...|++|+++++++++...+.+.+.. -+. .|..+.+.+.. +. .++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4688999987 9999999998888899999999988776655544431 122 24444433322 21 3799
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
++|++.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99998875
No 243
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.03 Score=50.00 Aligned_cols=75 Identities=19% Similarity=0.145 Sum_probs=53.4
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-E--EEcCCChhHHHHh-------hCCccEEE
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-Q--YLVSSDATRMQEA-------ADSLDYII 249 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~-------~~~~d~v~ 249 (357)
++++||+|+ |++|..+++.+...|.+|++++++.++.+.+.+.++.. + ..|..+.+.+.+. .+++|+++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 467999987 99999999988888999999999888776665544422 1 2344454333322 23789999
Q ss_pred EcCCCC
Q 018382 250 DTVPAN 255 (357)
Q Consensus 250 d~~g~~ 255 (357)
.++|..
T Consensus 83 ~~ag~~ 88 (275)
T PRK08263 83 NNAGYG 88 (275)
T ss_pred ECCCCc
Confidence 998864
No 244
>PLN02253 xanthoxin dehydrogenase
Probab=96.60 E-value=0.016 Score=51.89 Aligned_cols=75 Identities=17% Similarity=0.221 Sum_probs=53.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC--c---EEEcCCChhHHHHhh-------CCcc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA--D---QYLVSSDATRMQEAA-------DSLD 246 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~---~vv~~~~~~~~~~~~-------~~~d 246 (357)
.++++||+|+ |++|.++++.+...|++|++++++++..+.+.+.++. . ...|..+.+.+++.. +++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999987 9999999998888899999999877665555443432 1 124566654443322 3699
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
++++++|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99999875
No 245
>PRK06484 short chain dehydrogenase; Validated
Probab=96.60 E-value=0.013 Score=57.65 Aligned_cols=76 Identities=20% Similarity=0.309 Sum_probs=57.5
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHh----h---CCccE
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEA----A---DSLDY 247 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~----~---~~~d~ 247 (357)
.+++++||+|+ +++|.++++.+...|++|++++++.++.+.+.++++.. ..+|..+++.++++ . +++|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 36789999987 99999999999999999999999988877776656643 23455555443332 2 36999
Q ss_pred EEEcCCC
Q 018382 248 IIDTVPA 254 (357)
Q Consensus 248 v~d~~g~ 254 (357)
+++++|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999875
No 246
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.59 E-value=0.015 Score=53.19 Aligned_cols=71 Identities=21% Similarity=0.140 Sum_probs=54.3
Q ss_pred eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHHhhCCccEEEEcCCC
Q 018382 183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQEAADSLDYIIDTVPA 254 (357)
Q Consensus 183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~d~v~d~~g~ 254 (357)
+|||+|+ |.+|..+++.+...|.+|++++|+.++...+.. .+.+.+ .|..+++.+.+...++|+||.+++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVYGDLSLPETLPPSFKGVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-cCCEEEECCCCCHHHHHHHHCCCCEEEECCCC
Confidence 6899987 999999999998889999999998765544433 465433 3556666677777789999998764
No 247
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.011 Score=52.20 Aligned_cols=76 Identities=14% Similarity=0.170 Sum_probs=53.8
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh-------hCC
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA-------ADS 244 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~~ 244 (357)
-+++++||+|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. ...|..+.+.++.. .+.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 35688999987 99999999999899999999999887665554433 321 23455554433322 136
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++|.++|.
T Consensus 83 ~d~vi~~ag~ 92 (258)
T PRK07890 83 VDALVNNAFR 92 (258)
T ss_pred ccEEEECCcc
Confidence 8999998875
No 248
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.59 E-value=0.018 Score=46.87 Aligned_cols=90 Identities=16% Similarity=0.028 Sum_probs=57.4
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL 258 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (357)
-.|.+|+|+|+|.+|..-++.+...|++|++++. +..+.+.+ ++... +..+. +.+.-..++|+|+-+++.. ..
T Consensus 11 l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIsp--~~~~~l~~-l~~i~-~~~~~--~~~~dl~~a~lViaaT~d~-e~ 83 (157)
T PRK06719 11 LHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVSP--EICKEMKE-LPYIT-WKQKT--FSNDDIKDAHLIYAATNQH-AV 83 (157)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcC--ccCHHHHh-ccCcE-EEecc--cChhcCCCceEEEECCCCH-HH
Confidence 3678999999999999999988889999998853 33344444 54222 11111 1112234799999998887 55
Q ss_pred HHHHhccccCCeEEEEc
Q 018382 259 EPYLSLLKLDGKLILTG 275 (357)
Q Consensus 259 ~~~~~~l~~~G~~v~~g 275 (357)
+......+..+.++...
T Consensus 84 N~~i~~~a~~~~~vn~~ 100 (157)
T PRK06719 84 NMMVKQAAHDFQWVNVV 100 (157)
T ss_pred HHHHHHHHHHCCcEEEC
Confidence 55444444444455443
No 249
>PRK09186 flagellin modification protein A; Provisional
Probab=96.57 E-value=0.012 Score=51.85 Aligned_cols=74 Identities=20% Similarity=0.144 Sum_probs=53.2
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCc---E-EEcCCChhHHHHhh-------C
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GAD---Q-YLVSSDATRMQEAA-------D 243 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~---~-vv~~~~~~~~~~~~-------~ 243 (357)
+++++||+|+ |++|.+++..+...|++|+++.++.++.+.+.+.+ +.. . ..|..+++.+.++. +
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5789999987 99999999999989999999998877765554333 221 1 33666654443332 2
Q ss_pred CccEEEEcCC
Q 018382 244 SLDYIIDTVP 253 (357)
Q Consensus 244 ~~d~v~d~~g 253 (357)
++|+++++++
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 5899999985
No 250
>PRK09242 tropinone reductase; Provisional
Probab=96.57 E-value=0.013 Score=51.73 Aligned_cols=75 Identities=17% Similarity=0.207 Sum_probs=53.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc-----CCc---EEEcCCChhHHHH----h---hC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL-----GAD---QYLVSSDATRMQE----A---AD 243 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~vv~~~~~~~~~~----~---~~ 243 (357)
.++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+++ +.+ ...|..+.+.+++ + .+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999987 99999999999999999999999887765554332 211 1235555433322 2 23
Q ss_pred CccEEEEcCCC
Q 018382 244 SLDYIIDTVPA 254 (357)
Q Consensus 244 ~~d~v~d~~g~ 254 (357)
++|+++.++|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 251
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.012 Score=51.05 Aligned_cols=75 Identities=19% Similarity=0.184 Sum_probs=51.1
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE-EEcCCChhHHHH----h---hCCccE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ-YLVSSDATRMQE----A---ADSLDY 247 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~-vv~~~~~~~~~~----~---~~~~d~ 247 (357)
+++++||+|+ |.+|..+++.+...|++|++++++.++.....+. .+... ..|..+.+.+++ + .+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 4789999987 9999999999988899999999977654332221 23222 244444433322 2 237999
Q ss_pred EEEcCCC
Q 018382 248 IIDTVPA 254 (357)
Q Consensus 248 v~d~~g~ 254 (357)
||.++|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998875
No 252
>PRK06141 ornithine cyclodeaminase; Validated
Probab=96.55 E-value=0.017 Score=52.86 Aligned_cols=99 Identities=20% Similarity=0.154 Sum_probs=64.0
Q ss_pred ccCCCCCCCeEEEEecChHHHHHHHHHHH-cCC-eEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhhCCccEEE
Q 018382 174 HFGLKQSGLRGGILGLGGVGHMGVLIAKA-MGH-HVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAADSLDYII 249 (357)
Q Consensus 174 ~~~~~~~~~~VlI~G~g~~G~~ai~la~~-~g~-~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~d~v~ 249 (357)
.+.+ ...++++|+|+|..|.+.+..+.. .+. +|++..++.++.+.+.+++... .+.... ..++...+.|+|+
T Consensus 119 ~La~-~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~---~~~~av~~aDIVi 194 (314)
T PRK06141 119 YLAR-KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVT---DLEAAVRQADIIS 194 (314)
T ss_pred HhCC-CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeC---CHHHHHhcCCEEE
Confidence 3444 567889999999999998865543 565 8999999988887776655321 111111 1233446899999
Q ss_pred EcCCCCCChHHHHhccccCCeEEEEccC
Q 018382 250 DTVPANHPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
.+++....+- -.+.++++-.+..+|..
T Consensus 195 ~aT~s~~pvl-~~~~l~~g~~i~~ig~~ 221 (314)
T PRK06141 195 CATLSTEPLV-RGEWLKPGTHLDLVGNF 221 (314)
T ss_pred EeeCCCCCEe-cHHHcCCCCEEEeeCCC
Confidence 8887753321 12567777766566643
No 253
>PRK06128 oxidoreductase; Provisional
Probab=96.54 E-value=0.041 Score=49.92 Aligned_cols=75 Identities=15% Similarity=0.209 Sum_probs=49.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH--HHH---HHHhcCCcE---EEcCCChhHHHHh-------hC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK--RVE---AMEHLGADQ---YLVSSDATRMQEA-------AD 243 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~--~~~---~~~~~g~~~---vv~~~~~~~~~~~-------~~ 243 (357)
.++++||+|+ |++|.+++..+...|++|+++.++++. .+. ..+..|... ..|..+.+.++++ .+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 4689999987 999999999998899999887764321 111 122245322 2355554433332 23
Q ss_pred CccEEEEcCCC
Q 018382 244 SLDYIIDTVPA 254 (357)
Q Consensus 244 ~~d~v~d~~g~ 254 (357)
++|++|+++|.
T Consensus 134 ~iD~lV~nAg~ 144 (300)
T PRK06128 134 GLDILVNIAGK 144 (300)
T ss_pred CCCEEEECCcc
Confidence 79999999874
No 254
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.018 Score=49.87 Aligned_cols=71 Identities=21% Similarity=0.229 Sum_probs=52.5
Q ss_pred eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhh----CCccEEEEcCC
Q 018382 183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAA----DSLDYIIDTVP 253 (357)
Q Consensus 183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~----~~~d~v~d~~g 253 (357)
+++|+|+ |++|.+.++.+...|++|+++.+++++.+.+.+..+... ..|..+++.++++. ..+|++++++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 5899987 999999999998889999999998887766655455432 24656655444332 36899999875
No 255
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.54 E-value=0.031 Score=48.47 Aligned_cols=103 Identities=17% Similarity=0.174 Sum_probs=65.1
Q ss_pred hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCe---EEEEeCC----cHHH-------HHHHHhcCCcEEEcCCCh
Q 018382 170 SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHH---VTVISSS----DKKR-------VEAMEHLGADQYLVSSDA 235 (357)
Q Consensus 170 ~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~---V~~~~~~----~~~~-------~~~~~~~g~~~vv~~~~~ 235 (357)
.+++..+.--.+.+++|+|+|+.|.+++..+...|++ ++++.++ .++. ..+.+.++... .+ .
T Consensus 14 ~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~ 89 (226)
T cd05311 14 NALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---G 89 (226)
T ss_pred HHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---C
Confidence 3444444324678999999999999999998888974 8898887 3432 22323243211 11 1
Q ss_pred hHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382 236 TRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 236 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
+ +.+...++|+++++++....-...++.|.++..+..+.++
T Consensus 90 ~-l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~lsnP 130 (226)
T cd05311 90 T-LKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALANP 130 (226)
T ss_pred C-HHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeCCC
Confidence 2 2223346999999998542224667778787776666543
No 256
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.014 Score=51.40 Aligned_cols=74 Identities=16% Similarity=0.132 Sum_probs=52.0
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CC-cEE--EcCCChhHHHHhh-------CCcc
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GA-DQY--LVSSDATRMQEAA-------DSLD 246 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~-~~v--v~~~~~~~~~~~~-------~~~d 246 (357)
++++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+.+ +. ... .|..+++.+.+.. +++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468999987 99999999999999999999999877665544322 32 122 3555554433321 3689
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
++++++|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999874
No 257
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.52 E-value=0.025 Score=48.24 Aligned_cols=95 Identities=20% Similarity=0.238 Sum_probs=62.4
Q ss_pred CCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhhCCccEEE
Q 018382 178 KQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAADSLDYII 249 (357)
Q Consensus 178 ~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~~~~d~v~ 249 (357)
++++++||-+|+|. |..++.+++..+ .+|+.++.+++..+.+++. .+.. .++..+..+... ....||.|+
T Consensus 70 ~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~-~~~~fD~Ii 147 (205)
T PRK13944 70 PRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE-KHAPFDAII 147 (205)
T ss_pred CCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc-cCCCccEEE
Confidence 37889999998753 666777777664 5899999998866655543 3422 223222111111 124799998
Q ss_pred EcCCCCCChHHHHhccccCCeEEEE
Q 018382 250 DTVPANHPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~~v~~ 274 (357)
-+.........+.+.|+++|+++..
T Consensus 148 ~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 148 VTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred EccCcchhhHHHHHhcCcCcEEEEE
Confidence 7666543557788999999998764
No 258
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.018 Score=50.72 Aligned_cols=74 Identities=22% Similarity=0.263 Sum_probs=51.7
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC----cEEEcCCChhHHHHh-------hCCccE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA----DQYLVSSDATRMQEA-------ADSLDY 247 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~----~~vv~~~~~~~~~~~-------~~~~d~ 247 (357)
+++++||+|+ |++|..+++.+...|++|++++++++......+ ... ....|..+.+.++.. ..++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQ-LLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5689999987 999999999998899999999988765443333 321 122455554433322 136899
Q ss_pred EEEcCCC
Q 018382 248 IIDTVPA 254 (357)
Q Consensus 248 v~d~~g~ 254 (357)
++.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999875
No 259
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.50 E-value=0.04 Score=47.01 Aligned_cols=118 Identities=18% Similarity=0.075 Sum_probs=77.1
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc-HHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD-KKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL 258 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~-~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (357)
.|++|||+|+|.+|.-=+.++...|++|++++... .+...+.+..+... +. ..+......++++||-++++...-
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~-~~---~~~~~~~~~~~~lviaAt~d~~ln 86 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKW-IE---REFDAEDLDDAFLVIAATDDEELN 86 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcch-hh---cccChhhhcCceEEEEeCCCHHHH
Confidence 67899999999999999999999999999998765 44444444233211 11 111112223499999999998555
Q ss_pred HHHHhccccCCeEEEEccCCCCcccchHHHh-hccceEEEEeec
Q 018382 259 EPYLSLLKLDGKLILTGVINTPMQFLTPMVM-LGRKAITGSFIG 301 (357)
Q Consensus 259 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~g~~~~ 301 (357)
+...+..+..+++|.....+...++.....+ .+.+.+.-+..+
T Consensus 87 ~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~G 130 (210)
T COG1648 87 ERIAKAARERRILVNVVDDPELCDFIFPAIVDRGPLQIAISTGG 130 (210)
T ss_pred HHHHHHHHHhCCceeccCCcccCceecceeeccCCeEEEEECCC
Confidence 6677788888999888766554454444432 334444444443
No 260
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.49 E-value=0.022 Score=48.86 Aligned_cols=96 Identities=22% Similarity=0.298 Sum_probs=63.1
Q ss_pred CCCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHh---cCCcE--EEcCCChhHHHHhhCCccEEE
Q 018382 177 LKQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEH---LGADQ--YLVSSDATRMQEAADSLDYII 249 (357)
Q Consensus 177 ~~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~---~g~~~--vv~~~~~~~~~~~~~~~d~v~ 249 (357)
.++++++||-+|+|. |..++.+++..+ .+|+.+..+++-.+.+++. .|..+ ++..+..... .-.+.||+|+
T Consensus 73 ~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~-~~~~~fD~I~ 150 (212)
T PRK13942 73 DLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY-EENAPYDRIY 150 (212)
T ss_pred CCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CcCCCcCEEE
Confidence 348999999998753 666777777665 5899999998876665553 34322 2222211111 1124799997
Q ss_pred EcCCCCCChHHHHhccccCCeEEEE
Q 018382 250 DTVPANHPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~~v~~ 274 (357)
-............+.|+++|+++..
T Consensus 151 ~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 151 VTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred ECCCcccchHHHHHhhCCCcEEEEE
Confidence 6555444667888999999998775
No 261
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.022 Score=50.31 Aligned_cols=74 Identities=16% Similarity=0.104 Sum_probs=52.4
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC----c-EEEcCCChhHHHHh-------hCCccE
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA----D-QYLVSSDATRMQEA-------ADSLDY 247 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~----~-~vv~~~~~~~~~~~-------~~~~d~ 247 (357)
+.++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+.. . ..+|..+.+.+.+. .+.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 468999987 9999999999988899999999988776655553431 1 12355554443332 125899
Q ss_pred EEEcCCC
Q 018382 248 IIDTVPA 254 (357)
Q Consensus 248 v~d~~g~ 254 (357)
+++++|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9998874
No 262
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.48 E-value=0.02 Score=49.77 Aligned_cols=74 Identities=20% Similarity=0.129 Sum_probs=50.7
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHH----Hhh---CCccEEEEc
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQ----EAA---DSLDYIIDT 251 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~----~~~---~~~d~v~d~ 251 (357)
++++||+|+ +++|.++++.+...|++|+++++++++.....+..|... ..|..+.+.++ ++. +++|+++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 467999987 999999999998899999999987654433333355322 23554543332 222 369999998
Q ss_pred CCC
Q 018382 252 VPA 254 (357)
Q Consensus 252 ~g~ 254 (357)
+|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 874
No 263
>PRK04457 spermidine synthase; Provisional
Probab=96.46 E-value=0.045 Score=48.62 Aligned_cols=95 Identities=18% Similarity=0.239 Sum_probs=65.1
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcCC----c--EEEcCCChhHHHHhhCCccEEE-E
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLGA----D--QYLVSSDATRMQEAADSLDYII-D 250 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g~----~--~vv~~~~~~~~~~~~~~~d~v~-d 250 (357)
.+.++||++|+|+ |..+..+++.. +.+|+++..+++-.+.+++.++. . .++..+..+++++....+|+|+ |
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D 143 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVD 143 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEe
Confidence 4567899999864 66777777766 45999999999988888886652 1 2333333345555556899996 3
Q ss_pred cCCC---------CCChHHHHhccccCCeEEEE
Q 018382 251 TVPA---------NHPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 251 ~~g~---------~~~~~~~~~~l~~~G~~v~~ 274 (357)
.... ...+..+.+.|+++|.++..
T Consensus 144 ~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 144 GFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 3221 12456788899999998763
No 264
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.45 E-value=0.023 Score=53.19 Aligned_cols=96 Identities=21% Similarity=0.281 Sum_probs=68.1
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP 257 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (357)
-.+.+|||+|+|-+|..++..+...|. +|++.-|+.++...+.+++|+..+ . .+.+......+|+||.+++.+..
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~---l~el~~~l~~~DvVissTsa~~~ 251 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-A---LEELLEALAEADVVISSTSAPHP 251 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-c---HHHHHHhhhhCCEEEEecCCCcc
Confidence 367899999999999999999999997 899999999999888888995433 1 12233344589999999888632
Q ss_pred h---HHHHhccccC-C-eEEEEccCC
Q 018382 258 L---EPYLSLLKLD-G-KLILTGVIN 278 (357)
Q Consensus 258 ~---~~~~~~l~~~-G-~~v~~g~~~ 278 (357)
. ....+.+++. . .+++++.+.
T Consensus 252 ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 252 IITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred ccCHHHHHHHHhcccCeEEEEecCCC
Confidence 2 1233333333 2 356676653
No 265
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.018 Score=50.50 Aligned_cols=75 Identities=17% Similarity=0.269 Sum_probs=52.1
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh-------CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~~~ 245 (357)
.++++||+|+ |.+|..+++.+...|++|+++.+++++...+.+.+ +.. ...|..+.+.++.+. +++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999987 99999999999888999999999876554443322 211 234555544333221 368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999884
No 266
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.43 E-value=0.014 Score=52.09 Aligned_cols=96 Identities=26% Similarity=0.272 Sum_probs=56.5
Q ss_pred cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc--EEEcCCChhHHHHhhCCccEEE
Q 018382 175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD--QYLVSSDATRMQEAADSLDYII 249 (357)
Q Consensus 175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~vv~~~~~~~~~~~~~~~d~v~ 249 (357)
...+++|++||-+|+| -|-.++.+++..|++|+.++.+++..+.++++ .|.. ..+...+. .++...||.|+
T Consensus 57 ~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~---~~~~~~fD~Iv 132 (273)
T PF02353_consen 57 KLGLKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDY---RDLPGKFDRIV 132 (273)
T ss_dssp TTT--TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-G---GG---S-SEEE
T ss_pred HhCCCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeec---cccCCCCCEEE
Confidence 3345999999999987 46667788888899999999999887766542 3421 11222221 23334899876
Q ss_pred E-----cCCCC---CChHHHHhccccCCeEEEE
Q 018382 250 D-----TVPAN---HPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 250 d-----~~g~~---~~~~~~~~~l~~~G~~v~~ 274 (357)
. .+|.. ..+..+.+.|+|+|+++.-
T Consensus 133 Si~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 133 SIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp EESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred EEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 4 44432 2356778899999998753
No 267
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.43 E-value=0.024 Score=51.73 Aligned_cols=90 Identities=22% Similarity=0.275 Sum_probs=61.5
Q ss_pred CeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382 182 LRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP-- 257 (357)
Q Consensus 182 ~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~-- 257 (357)
.+|.|+|+|.+|.+++..++..|. +|++.++++++.+.+++ .|....+.. + ..+.....|+||.|+.....
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~-~g~~~~~~~-~---~~~~~~~aDvViiavp~~~~~~ 81 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARE-LGLGDRVTT-S---AAEAVKGADLVILCVPVGASGA 81 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHh-CCCCceecC-C---HHHHhcCCCEEEECCCHHHHHH
Confidence 579999999999999999888884 89999999888777766 775321111 1 12233578999999887521
Q ss_pred -hHHHHhccccCCeEEEEcc
Q 018382 258 -LEPYLSLLKLDGKLILTGV 276 (357)
Q Consensus 258 -~~~~~~~l~~~G~~v~~g~ 276 (357)
+......++++..++.++.
T Consensus 82 v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 82 VAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHhhCCCCCEEEeCcc
Confidence 2233345566666666654
No 268
>PRK08589 short chain dehydrogenase; Validated
Probab=96.43 E-value=0.019 Score=51.23 Aligned_cols=74 Identities=15% Similarity=0.267 Sum_probs=50.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHH----hh---CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQE----AA---DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~----~~---~~~ 245 (357)
+++++||+|+ +++|.+.++.+...|++|+++.++ ++.+.+.+++ +.. ..+|..+.+.+.. +. +.+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 5789999987 999999999888889999999988 5444333222 321 2345555443332 22 368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++++++|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999875
No 269
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.017 Score=49.94 Aligned_cols=72 Identities=17% Similarity=0.139 Sum_probs=51.3
Q ss_pred CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHh----h-CCccEEEEcCC
Q 018382 182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEA----A-DSLDYIIDTVP 253 (357)
Q Consensus 182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~----~-~~~d~v~d~~g 253 (357)
++|+|+|+ |++|.+.++.+...|++|+++++++++.+.+.+ ++.. ..+|..+.+.++++ . +++|++|.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 46899987 999999998888889999999998877665554 4322 22455555443333 2 26999999876
Q ss_pred C
Q 018382 254 A 254 (357)
Q Consensus 254 ~ 254 (357)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 5
No 270
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.42 E-value=0.018 Score=50.96 Aligned_cols=126 Identities=17% Similarity=0.107 Sum_probs=83.5
Q ss_pred cCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCC-----------hhH------
Q 018382 175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSD-----------ATR------ 237 (357)
Q Consensus 175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~-----------~~~------ 237 (357)
++.-.+...+|+.|.|..|++++..++..|+-|....-...+.++.+. +|+...-.... +++
T Consensus 158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s-~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~ 236 (356)
T COG3288 158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQVES-LGAKFLAVEDEESAGGYAKEMSEEFIAKQAE 236 (356)
T ss_pred hcccccchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhhhh-cccccccccccccCCCccccCCHHHHHHHHH
Confidence 333356678899999999999999999999999988877777777766 77543211111 112
Q ss_pred -HHHhhCCccEEEEcC---CCCC---ChHHHHhccccCCeEEEEccCCC-Cccc--chHHHhhccceEEEEeec
Q 018382 238 -MQEAADSLDYIIDTV---PANH---PLEPYLSLLKLDGKLILTGVINT-PMQF--LTPMVMLGRKAITGSFIG 301 (357)
Q Consensus 238 -~~~~~~~~d~v~d~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~~-~~~~--~~~~~~~~~~~i~g~~~~ 301 (357)
+.+...++|+||.++ |.+. ..+...+.|+||+.+|++....+ +... +-.....+..+++|...-
T Consensus 237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nl 310 (356)
T COG3288 237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNL 310 (356)
T ss_pred HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCc
Confidence 112224899999876 2221 34568889999999999865433 2221 112245677788887764
No 271
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.42 E-value=0.015 Score=56.37 Aligned_cols=76 Identities=18% Similarity=0.241 Sum_probs=55.5
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCc---------------------HHHHHHHHhcCCcEEEcCCCh-h
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSD---------------------KKRVEAMEHLGADQYLVSSDA-T 236 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~---------------------~~~~~~~~~~g~~~vv~~~~~-~ 236 (357)
..+++|+|+|+|+.|+.++..++..|.+|++....+ ...+++++ +|.+..++..-. +
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~ 217 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTA-MGIEFHLNCEVGRD 217 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHH-CCCEEECCCEeCCc
Confidence 367899999999999999999999999998887653 23445555 887665543221 1
Q ss_pred -HHHHhhCCccEEEEcCCCC
Q 018382 237 -RMQEAADSLDYIIDTVPAN 255 (357)
Q Consensus 237 -~~~~~~~~~d~v~d~~g~~ 255 (357)
.++.+..++|.||.++|..
T Consensus 218 ~~~~~~~~~~D~vilAtGa~ 237 (467)
T TIGR01318 218 ISLDDLLEDYDAVFLGVGTY 237 (467)
T ss_pred cCHHHHHhcCCEEEEEeCCC
Confidence 2233345799999999986
No 272
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.42 E-value=0.05 Score=48.15 Aligned_cols=75 Identities=9% Similarity=0.103 Sum_probs=50.0
Q ss_pred CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCc---HHHHHHHHhc-CCc---EEEcCCChhHHHH----hh---
Q 018382 180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSD---KKRVEAMEHL-GAD---QYLVSSDATRMQE----AA--- 242 (357)
Q Consensus 180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~---~~~~~~~~~~-g~~---~vv~~~~~~~~~~----~~--- 242 (357)
.+++++|+|+ +++|.++++.+...|++|+++.+++ ++.+.+.+++ +.. ..+|..+++.+++ +.
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 5788999986 5999999998888999999986542 3444454434 211 2245555443332 22
Q ss_pred CCccEEEEcCCC
Q 018382 243 DSLDYIIDTVPA 254 (357)
Q Consensus 243 ~~~d~v~d~~g~ 254 (357)
+.+|++++++|.
T Consensus 86 g~ld~lv~nag~ 97 (257)
T PRK08594 86 GVIHGVAHCIAF 97 (257)
T ss_pred CCccEEEECccc
Confidence 369999998863
No 273
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.017 Score=51.12 Aligned_cols=74 Identities=19% Similarity=0.191 Sum_probs=53.6
Q ss_pred CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-C---cEEEcCCChhHHHH----h----hCCccEE
Q 018382 182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-A---DQYLVSSDATRMQE----A----ADSLDYI 248 (357)
Q Consensus 182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-~---~~vv~~~~~~~~~~----~----~~~~d~v 248 (357)
+++||+|+ |++|..+++.+...|++|++++++.++.+.+.+..+ . ...+|..+.+.+.+ . .+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 47899987 999999999888889999999998887776655443 1 12345565443332 2 2368999
Q ss_pred EEcCCCC
Q 018382 249 IDTVPAN 255 (357)
Q Consensus 249 ~d~~g~~ 255 (357)
+.++|..
T Consensus 82 i~~ag~~ 88 (260)
T PRK08267 82 FNNAGIL 88 (260)
T ss_pred EECCCCC
Confidence 9998763
No 274
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.40 E-value=0.022 Score=51.00 Aligned_cols=75 Identities=19% Similarity=0.269 Sum_probs=51.9
Q ss_pred CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCc---HHHHHHHHhcCCcE--EEcCCChhHHHH----hh---CC
Q 018382 180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSD---KKRVEAMEHLGADQ--YLVSSDATRMQE----AA---DS 244 (357)
Q Consensus 180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~---~~~~~~~~~~g~~~--vv~~~~~~~~~~----~~---~~ 244 (357)
.++++||+|+ +++|+++++.+...|++|+++.+++ ++.+.+.++++... .+|..+.+.+++ +. +.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4689999986 4899999998888999999988874 23344434355332 346666543332 22 37
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++++++|.
T Consensus 84 iDilVnnAG~ 93 (274)
T PRK08415 84 IDFIVHSVAF 93 (274)
T ss_pred CCEEEECCcc
Confidence 9999999884
No 275
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.017 Score=50.60 Aligned_cols=75 Identities=15% Similarity=0.189 Sum_probs=52.8
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc--CCc-E--EEcCCChhHHHHhh-------CCcc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL--GAD-Q--YLVSSDATRMQEAA-------DSLD 246 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~--g~~-~--vv~~~~~~~~~~~~-------~~~d 246 (357)
+++++||+|+ |.+|..+++.+...|++|+++.++.++.....+.. +.. . ..|..+++.++++. +++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999987 99999999988888999999999877655444423 321 1 23555554433321 3799
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
+++.++|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999885
No 276
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.02 Score=50.63 Aligned_cols=75 Identities=23% Similarity=0.297 Sum_probs=53.2
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCc-E--EEcCCChhHHHHhh---CCccEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GAD-Q--YLVSSDATRMQEAA---DSLDYI 248 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~--vv~~~~~~~~~~~~---~~~d~v 248 (357)
.++++||+|+ +++|..+++.+...|++|+++++++++.+.+.+.+ +.. + ..|..+.+.+.++. +.+|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 4689999987 99999999998889999999999877665543322 321 1 23555544443332 479999
Q ss_pred EEcCCC
Q 018382 249 IDTVPA 254 (357)
Q Consensus 249 ~d~~g~ 254 (357)
++++|.
T Consensus 86 v~~ag~ 91 (259)
T PRK06125 86 VNNAGA 91 (259)
T ss_pred EECCCC
Confidence 998875
No 277
>PRK08017 oxidoreductase; Provisional
Probab=96.39 E-value=0.026 Score=49.66 Aligned_cols=72 Identities=19% Similarity=0.164 Sum_probs=53.2
Q ss_pred CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHH----Hh---h-CCccEEEEc
Q 018382 182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQ----EA---A-DSLDYIIDT 251 (357)
Q Consensus 182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~----~~---~-~~~d~v~d~ 251 (357)
+++||+|+ |++|.++++.+...|++|+++.++.++.+.+.+ .+...+ .|..+.+.+. .+ . +.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 47999998 999999999999999999999999888777665 665433 4555543322 22 1 367889988
Q ss_pred CCC
Q 018382 252 VPA 254 (357)
Q Consensus 252 ~g~ 254 (357)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 774
No 278
>PRK08643 acetoin reductase; Validated
Probab=96.37 E-value=0.019 Score=50.61 Aligned_cols=74 Identities=15% Similarity=0.210 Sum_probs=51.7
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHH----hh---CCcc
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQE----AA---DSLD 246 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~----~~---~~~d 246 (357)
++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.. ...|..+++.+.+ +. +++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 568899987 99999999999889999999999877655444322 322 1235555443332 22 3799
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
+++.++|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999875
No 279
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.36 E-value=0.02 Score=50.60 Aligned_cols=72 Identities=15% Similarity=0.128 Sum_probs=50.8
Q ss_pred eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCcE--EEcCCChhHHHHh-------hCCccEEE
Q 018382 183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GADQ--YLVSSDATRMQEA-------ADSLDYII 249 (357)
Q Consensus 183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~~--vv~~~~~~~~~~~-------~~~~d~v~ 249 (357)
++||+|+ +++|.++++.+...|++|+++++++++.+.+.+++ +..+ ..|..+.+.++++ .+++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899987 99999999999888999999999887665544322 3222 2355554433332 23799999
Q ss_pred EcCCC
Q 018382 250 DTVPA 254 (357)
Q Consensus 250 d~~g~ 254 (357)
+++|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99874
No 280
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.027 Score=50.31 Aligned_cols=75 Identities=17% Similarity=0.182 Sum_probs=51.7
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-----C-cEE--EcCCChhHHHHh----h---C
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-----A-DQY--LVSSDATRMQEA----A---D 243 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-----~-~~v--v~~~~~~~~~~~----~---~ 243 (357)
+++++||+|+ |.+|..+++.+...|++|++++++.++.+...+++. . -.+ .|..+++.+... . +
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999987 999999999999899999999988766544433221 1 122 255554433322 1 3
Q ss_pred CccEEEEcCCC
Q 018382 244 SLDYIIDTVPA 254 (357)
Q Consensus 244 ~~d~v~d~~g~ 254 (357)
++|++|.++|.
T Consensus 86 ~~d~li~~ag~ 96 (276)
T PRK05875 86 RLHGVVHCAGG 96 (276)
T ss_pred CCCEEEECCCc
Confidence 78999999874
No 281
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.024 Score=50.24 Aligned_cols=76 Identities=14% Similarity=0.195 Sum_probs=53.5
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc--CC-cE--EEcCCChhHHHHh------hCCccE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL--GA-DQ--YLVSSDATRMQEA------ADSLDY 247 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~--g~-~~--vv~~~~~~~~~~~------~~~~d~ 247 (357)
+++++||+|+ |++|..+++.+...|++|+++++++++.+.+...+ +. .+ ..|..+.+.++.+ .+.+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999986 99999999998888999999999887766554432 21 11 2355554433322 246899
Q ss_pred EEEcCCCC
Q 018382 248 IIDTVPAN 255 (357)
Q Consensus 248 v~d~~g~~ 255 (357)
++.++|..
T Consensus 84 lv~~ag~~ 91 (263)
T PRK09072 84 LINNAGVN 91 (263)
T ss_pred EEECCCCC
Confidence 99998753
No 282
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.33 E-value=0.025 Score=50.17 Aligned_cols=75 Identities=17% Similarity=0.280 Sum_probs=50.2
Q ss_pred CCCeEEEEec-C--hHHHHHHHHHHHcCCeEEEEeCCcH---HHHHHHHhcCCcE--EEcCCChhHHHHh----h---CC
Q 018382 180 SGLRGGILGL-G--GVGHMGVLIAKAMGHHVTVISSSDK---KRVEAMEHLGADQ--YLVSSDATRMQEA----A---DS 244 (357)
Q Consensus 180 ~~~~VlI~G~-g--~~G~~ai~la~~~g~~V~~~~~~~~---~~~~~~~~~g~~~--vv~~~~~~~~~~~----~---~~ 244 (357)
.++++||+|+ + ++|.++++.+...|++|++..+++. ..+.+.+..|... .+|..+++.++++ . +.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5788999987 4 7999998888888999999887632 2333333345332 2466665443332 2 36
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++++++|.
T Consensus 87 iDilVnnag~ 96 (260)
T PRK06603 87 FDFLLHGMAF 96 (260)
T ss_pred ccEEEEcccc
Confidence 9999998873
No 283
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.31 E-value=0.1 Score=46.00 Aligned_cols=153 Identities=14% Similarity=0.111 Sum_probs=83.1
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCC----
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPA---- 254 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~---- 254 (357)
.++.+||-+|+|. |..+..+++ .|.+|++++.+++..+.+++.......+..+..+ +.-..+.+|+|+....-
T Consensus 41 ~~~~~vLDiGcG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~-~~~~~~~fD~V~s~~~l~~~~ 117 (251)
T PRK10258 41 RKFTHVLDAGCGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIES-LPLATATFDLAWSNLAVQWCG 117 (251)
T ss_pred cCCCeEEEeeCCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCccc-CcCCCCcEEEEEECchhhhcC
Confidence 4678899999864 555555544 5789999999998888777744332222221111 11112369999864321
Q ss_pred --CCChHHHHhccccCCeEEEEccCCCCcccchHHHhhc-cceEEEEeecCHHHHHHHHHHHHhcCCCccE--EEeeccc
Q 018382 255 --NHPLEPYLSLLKLDGKLILTGVINTPMQFLTPMVMLG-RKAITGSFIGSMKETKEMLEFCREKGVTSMI--EVIKMDY 329 (357)
Q Consensus 255 --~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~i--~~~~~~~ 329 (357)
...+..+.+.|+++|.++......+.... ....+.. ..........+.+ ++.+++....+.... -++.+++
T Consensus 118 d~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~e-l~~~~~~~~~~~~~~~~~~~~---~l~~~l~~~~~~~~~~~~~~~f~~ 193 (251)
T PRK10258 118 NLSTALRELYRVVRPGGVVAFTTLVQGSLPE-LHQAWQAVDERPHANRFLPPD---AIEQALNGWRYQHHIQPITLWFDD 193 (251)
T ss_pred CHHHHHHHHHHHcCCCeEEEEEeCCCCchHH-HHHHHHHhccCCccccCCCHH---HHHHHHHhCCceeeeeEEEEECCC
Confidence 12466788899999999876544332211 1111100 0011111122333 333344443343332 3556788
Q ss_pred HHHHHHHHH
Q 018382 330 VNKAFERLE 338 (357)
Q Consensus 330 ~~~a~~~~~ 338 (357)
..+.++.++
T Consensus 194 ~~~~l~~lk 202 (251)
T PRK10258 194 ALSAMRSLK 202 (251)
T ss_pred HHHHHHHHH
Confidence 888888776
No 284
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.017 Score=52.62 Aligned_cols=76 Identities=26% Similarity=0.306 Sum_probs=52.1
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc-----CCc---EEEcCCChhHHHHh----h---
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL-----GAD---QYLVSSDATRMQEA----A--- 242 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~vv~~~~~~~~~~~----~--- 242 (357)
..++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ +.. ..+|..+.+.++++ .
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 36789999987 99999999988888999999999877654432212 111 12355554433332 2
Q ss_pred CCccEEEEcCCC
Q 018382 243 DSLDYIIDTVPA 254 (357)
Q Consensus 243 ~~~d~v~d~~g~ 254 (357)
+++|++|.++|.
T Consensus 94 ~~iD~li~nAg~ 105 (306)
T PRK06197 94 PRIDLLINNAGV 105 (306)
T ss_pred CCCCEEEECCcc
Confidence 369999999874
No 285
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.30 E-value=0.025 Score=49.89 Aligned_cols=75 Identities=15% Similarity=0.164 Sum_probs=53.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-E--EEcCCChhHHHHh-------hCCccEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-Q--YLVSSDATRMQEA-------ADSLDYI 248 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~-------~~~~d~v 248 (357)
.++++||+|+ |++|...++.+...|++|++++++.++.+.+.+.++.. . ..|..+.+.++.+ .+.+|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999987 99999999999888999999999988776666545422 1 2344444333322 1368999
Q ss_pred EEcCCC
Q 018382 249 IDTVPA 254 (357)
Q Consensus 249 ~d~~g~ 254 (357)
+.++|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998864
No 286
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.30 E-value=0.026 Score=50.69 Aligned_cols=96 Identities=17% Similarity=0.153 Sum_probs=73.0
Q ss_pred ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382 159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR 237 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~ 237 (357)
+.+||........|+..+.--.|++|.|+|. +.+|.-++.++...|++|++..+... .
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~---------------------~ 195 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST---------------------D 195 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC---------------------C
Confidence 4567776667777776665457999999998 59999999999999999999765422 1
Q ss_pred HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382 238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
.++.....|+|+-++|....+...+ ++++..++++|..
T Consensus 196 l~e~~~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin 233 (301)
T PRK14194 196 AKALCRQADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN 233 (301)
T ss_pred HHHHHhcCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence 3344556899999999985555443 8899899998854
No 287
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.03 Score=50.00 Aligned_cols=73 Identities=15% Similarity=0.106 Sum_probs=52.7
Q ss_pred CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHh-------hCCccEEEE
Q 018382 182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEA-------ADSLDYIID 250 (357)
Q Consensus 182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~~~d~v~d 250 (357)
+++||+|+ |.+|..+++.+...|.+|+++.+++++.+.+.+..+.. ...|..+.+.+.+. .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57999987 99999999988888999999999987776665544422 12455554433322 136899999
Q ss_pred cCCC
Q 018382 251 TVPA 254 (357)
Q Consensus 251 ~~g~ 254 (357)
++|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9875
No 288
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.026 Score=49.63 Aligned_cols=75 Identities=17% Similarity=0.252 Sum_probs=52.1
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc-E--EEcCCChhHHHH----hh---CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD-Q--YLVSSDATRMQE----AA---DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--vv~~~~~~~~~~----~~---~~~ 245 (357)
+++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+++ +.. + .+|..+.+.+++ .. +.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 99999999999989999999999877655444422 321 1 234544433322 21 368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|+++.++|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999998874
No 289
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.026 Score=49.99 Aligned_cols=74 Identities=15% Similarity=0.206 Sum_probs=51.0
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhh-------CCcc
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAA-------DSLD 246 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~-------~~~d 246 (357)
+.++||+|+ |++|..+++.+...|++|+++++++++.+.+.+. .+.. ...|..+.+.+.+.. .++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357899987 9999999999988899999999987665444322 2322 123555544333221 3689
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
++|.++|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999875
No 290
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.25 E-value=0.036 Score=48.83 Aligned_cols=75 Identities=15% Similarity=0.180 Sum_probs=50.7
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHHHhcCCc---EEEcCCChhHHHHh-------hCCccE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAMEHLGAD---QYLVSSDATRMQEA-------ADSLDY 247 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~~~d~ 247 (357)
+++++||+|+ +++|.++++.+...|++|+++.+++.. .....+..+.+ ...|..+.+.++++ .+++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999987 999999999998999999988775432 22222224532 12455555443332 237999
Q ss_pred EEEcCCC
Q 018382 248 IIDTVPA 254 (357)
Q Consensus 248 v~d~~g~ 254 (357)
+++++|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9999875
No 291
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.25 E-value=0.033 Score=48.89 Aligned_cols=72 Identities=17% Similarity=0.221 Sum_probs=52.4
Q ss_pred eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE---EEcCCChhHHHHh----h---CCccEEEEc
Q 018382 183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ---YLVSSDATRMQEA----A---DSLDYIIDT 251 (357)
Q Consensus 183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~----~---~~~d~v~d~ 251 (357)
+++|+|+ |++|.+++..+...|++|+++++++++.+.+.+.++... ..|..+.+.+++. . +++|+++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6899987 999999999998889999999999887766655455321 2355554433322 1 379999998
Q ss_pred CCC
Q 018382 252 VPA 254 (357)
Q Consensus 252 ~g~ 254 (357)
+|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 875
No 292
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.25 E-value=0.051 Score=48.45 Aligned_cols=96 Identities=18% Similarity=0.187 Sum_probs=71.7
Q ss_pred ccccchhhhhhhhhhccCCCCCCCeEEEEecC-hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382 159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGLG-GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR 237 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g-~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~ 237 (357)
+.+||.....+..|...+.--.|++|+|+|.| .+|.-++.++...|+.|++..+... .
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~---------------------~ 193 (285)
T PRK14191 135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK---------------------D 193 (285)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH---------------------H
Confidence 45677777777777766653579999999975 9999999999999999988643211 1
Q ss_pred HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382 238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
+++....+|+|+-++|.+..+. .+.++++..++.+|..
T Consensus 194 l~~~~~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 194 LSFYTQNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGIN 231 (285)
T ss_pred HHHHHHhCCEEEEecCCCCcCC--HHHcCCCcEEEEeecc
Confidence 2344557899999999985433 4577999999999864
No 293
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.24 E-value=0.028 Score=49.65 Aligned_cols=75 Identities=21% Similarity=0.252 Sum_probs=53.2
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHH----h---hCCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQE----A---ADSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~----~---~~~~ 245 (357)
+++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+. .+.. ...|..+.+.+++ + ..++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999987 9999999999988999999999987765544432 2321 2245555544422 2 1368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|+++.++|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999874
No 294
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.24 E-value=0.025 Score=49.75 Aligned_cols=75 Identities=16% Similarity=0.220 Sum_probs=52.8
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHhh-------CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~~~ 245 (357)
.++++||+|+ |++|.++++.+...|++|+++.+++++...+.+++ +.. ...|..+.+.+.+.. +++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 5678999987 99999999999888999999999877655443322 321 123555544333321 368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|+++.++|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999875
No 295
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.24 E-value=0.037 Score=49.29 Aligned_cols=96 Identities=20% Similarity=0.224 Sum_probs=72.8
Q ss_pred ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382 159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR 237 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~ 237 (357)
...||.....+..|+....--.|++|+|+|- ..+|.-++.++...|+.|++..+... .
T Consensus 137 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~---------------------~ 195 (285)
T PRK10792 137 LLRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK---------------------N 195 (285)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC---------------------C
Confidence 3567777777777777665357999999997 56999999999999999988765311 1
Q ss_pred HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382 238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
+++....+|+++.++|.+..+. .+.++++-.++++|..
T Consensus 196 l~~~~~~ADIvi~avG~p~~v~--~~~vk~gavVIDvGin 233 (285)
T PRK10792 196 LRHHVRNADLLVVAVGKPGFIP--GEWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHHHhhCCEEEEcCCCccccc--HHHcCCCcEEEEcccc
Confidence 3445567999999999985443 3788999999999854
No 296
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.23 E-value=0.022 Score=52.23 Aligned_cols=75 Identities=12% Similarity=0.167 Sum_probs=51.0
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh----cCCc----EEEcCCC--hhHHHHh---hC--
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH----LGAD----QYLVSSD--ATRMQEA---AD-- 243 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~----~g~~----~vv~~~~--~~~~~~~---~~-- 243 (357)
.|++++|+|+ +++|.+.++.+...|++|+++++++++.+.+.++ ++.. ..+|..+ .+.++.+ .+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 5889999987 9999998888888899999999998877655432 2211 1234432 2222222 22
Q ss_pred CccEEEEcCCC
Q 018382 244 SLDYIIDTVPA 254 (357)
Q Consensus 244 ~~d~v~d~~g~ 254 (357)
.+|++++++|.
T Consensus 132 didilVnnAG~ 142 (320)
T PLN02780 132 DVGVLINNVGV 142 (320)
T ss_pred CccEEEEecCc
Confidence 46699998874
No 297
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.22 E-value=0.023 Score=50.15 Aligned_cols=75 Identities=13% Similarity=0.218 Sum_probs=53.2
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hCCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------ADSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~~~ 245 (357)
+++++||+|+ |.+|..+++.+...|++|+++.+++++.+.+.+. .+.+. ..|..+.+.+++. .+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999987 9999999999999999999999988665544332 34332 2355554433322 1368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|+++.++|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999998875
No 298
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.19 E-value=0.035 Score=49.50 Aligned_cols=97 Identities=19% Similarity=0.255 Sum_probs=72.2
Q ss_pred ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382 159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR 237 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~ 237 (357)
..+||........|++.+.--.|++|+|+|. ..+|.-++.++...|++|++..+.. ..
T Consensus 136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t---------------------~~ 194 (285)
T PRK14189 136 LFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT---------------------RD 194 (285)
T ss_pred CCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC---------------------CC
Confidence 4567776666666776665458999999997 5569999999999999999854321 11
Q ss_pred HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
+++.....|+|+-++|.+..+. .+.++++-.++.+|...
T Consensus 195 l~~~~~~ADIVV~avG~~~~i~--~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 195 LAAHTRQADIVVAAVGKRNVLT--ADMVKPGATVIDVGMNR 233 (285)
T ss_pred HHHHhhhCCEEEEcCCCcCccC--HHHcCCCCEEEEccccc
Confidence 3345557999999999885444 38899999999998653
No 299
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.19 E-value=0.027 Score=49.05 Aligned_cols=76 Identities=20% Similarity=0.282 Sum_probs=51.7
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhh-------CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~-------~~~ 245 (357)
.+.+++|+|+ |++|..++..+...|++|++++++.++.+...+. .+.. ...|..+.+.+.+.. +++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3578999987 9999999998888899999999987765443321 2322 123444444333322 379
Q ss_pred cEEEEcCCCC
Q 018382 246 DYIIDTVPAN 255 (357)
Q Consensus 246 d~v~d~~g~~ 255 (357)
|++|.++|..
T Consensus 86 d~vi~~ag~~ 95 (239)
T PRK07666 86 DILINNAGIS 95 (239)
T ss_pred cEEEEcCccc
Confidence 9999988753
No 300
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.023 Score=49.97 Aligned_cols=75 Identities=19% Similarity=0.227 Sum_probs=52.0
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc-E--EEcCCChhHHHH----h---hCCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD-Q--YLVSSDATRMQE----A---ADSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--vv~~~~~~~~~~----~---~~~~ 245 (357)
.++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+. .+.. . ..|..+.+.+.+ + .+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999987 9999999988888899999999987765443322 3322 1 235555443332 2 1368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|+++.++|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999998875
No 301
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.18 E-value=0.033 Score=49.77 Aligned_cols=76 Identities=21% Similarity=0.286 Sum_probs=51.5
Q ss_pred CCCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCc---HHHHHHHHhcCCc--EEEcCCChhHHHH----hh---C
Q 018382 179 QSGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSD---KKRVEAMEHLGAD--QYLVSSDATRMQE----AA---D 243 (357)
Q Consensus 179 ~~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~---~~~~~~~~~~g~~--~vv~~~~~~~~~~----~~---~ 243 (357)
-.++++||+|+ +++|.++++.+...|++|+++.+++ ++.+.+.++++.. ...|..+.+.+++ +. +
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 45788999986 5899999999988999999887753 3344444445632 2345555443333 22 3
Q ss_pred CccEEEEcCCC
Q 018382 244 SLDYIIDTVPA 254 (357)
Q Consensus 244 ~~d~v~d~~g~ 254 (357)
.+|++++++|.
T Consensus 88 ~iD~lv~nAG~ 98 (272)
T PRK08159 88 KLDFVVHAIGF 98 (272)
T ss_pred CCcEEEECCcc
Confidence 68999999874
No 302
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.18 E-value=0.032 Score=48.87 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=50.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH--HHHHHHhcCCc---EEEcCCChhHHH----Hhh---CCcc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK--RVEAMEHLGAD---QYLVSSDATRMQ----EAA---DSLD 246 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~--~~~~~~~~g~~---~vv~~~~~~~~~----~~~---~~~d 246 (357)
.++++||+|+ |++|.++++.+...|++|+++++++.. .+.+.+ .+.. ...|..+.+.+. ++. +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEA-LGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999987 999999999998899999999886532 122222 4422 223555544333 221 3699
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
++++++|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99998875
No 303
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.17 E-value=0.034 Score=48.35 Aligned_cols=70 Identities=19% Similarity=0.216 Sum_probs=54.6
Q ss_pred EEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH--HHHHHHhcCCcEE-EcCCChhHHHHhhCCccEEEEcCCC
Q 018382 184 GGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK--RVEAMEHLGADQY-LVSSDATRMQEAADSLDYIIDTVPA 254 (357)
Q Consensus 184 VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~--~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~d~v~d~~g~ 254 (357)
|+|+|+ |.+|...++.+...+.+|.+.+|+..+ ...++. .|+..+ .|+.+++.+.+...++|.||.+.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-LGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-TTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-ccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 689997 999999999999988899999998753 344455 787543 4566677778888899999998884
No 304
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.17 E-value=0.031 Score=49.83 Aligned_cols=77 Identities=18% Similarity=0.253 Sum_probs=55.0
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc------EEEcCCChhHHHHh-------
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD------QYLVSSDATRMQEA------- 241 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~------~vv~~~~~~~~~~~------- 241 (357)
-.|+.+||+|+ .++|.+++..+...|++|+++.+++++.+..+..+ +.. ...|..+.+..+++
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 46788999986 99999999999999999999999998766555432 221 23344443332222
Q ss_pred -hCCccEEEEcCCCC
Q 018382 242 -ADSLDYIIDTVPAN 255 (357)
Q Consensus 242 -~~~~d~v~d~~g~~ 255 (357)
.+.+|+.++.+|..
T Consensus 86 ~~GkidiLvnnag~~ 100 (270)
T KOG0725|consen 86 FFGKIDILVNNAGAL 100 (270)
T ss_pred hCCCCCEEEEcCCcC
Confidence 24699999988775
No 305
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.17 E-value=0.027 Score=49.94 Aligned_cols=77 Identities=18% Similarity=0.196 Sum_probs=51.5
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cC-C-cEEEcCCChhHHHH-------hhCCc
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LG-A-DQYLVSSDATRMQE-------AADSL 245 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g-~-~~vv~~~~~~~~~~-------~~~~~ 245 (357)
-+|+.|||+|+ +++|.++++=....|+++++.+.+.+..++..+. .| + ..+.|-++.+.+.+ ..+.+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V 115 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV 115 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence 35899999986 8999987777777799888877666543333221 34 2 34566666443332 23479
Q ss_pred cEEEEcCCCC
Q 018382 246 DYIIDTVPAN 255 (357)
Q Consensus 246 d~v~d~~g~~ 255 (357)
|+++|.+|--
T Consensus 116 ~ILVNNAGI~ 125 (300)
T KOG1201|consen 116 DILVNNAGIV 125 (300)
T ss_pred eEEEeccccc
Confidence 9999988763
No 306
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.17 E-value=0.045 Score=40.28 Aligned_cols=86 Identities=29% Similarity=0.315 Sum_probs=59.5
Q ss_pred eEEEEecChHHHHHHHHHHHcC---CeEEEE-eCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382 183 RGGILGLGGVGHMGVLIAKAMG---HHVTVI-SSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL 258 (357)
Q Consensus 183 ~VlI~G~g~~G~~ai~la~~~g---~~V~~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (357)
++.|+|+|.+|.++++-+...| .+|+++ .+++++.+.+.++++...... +. .+.....|+||-|+-.. .+
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-~~----~~~~~~advvilav~p~-~~ 74 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-DN----EEAAQEADVVILAVKPQ-QL 74 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-EH----HHHHHHTSEEEE-S-GG-GH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-Ch----HHhhccCCEEEEEECHH-HH
Confidence 4677899999999999999888 789955 999999988888788554321 11 22333789999999887 55
Q ss_pred HHHHhc---cccCCeEEEE
Q 018382 259 EPYLSL---LKLDGKLILT 274 (357)
Q Consensus 259 ~~~~~~---l~~~G~~v~~ 274 (357)
...++. ..++..++++
T Consensus 75 ~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 75 PEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhhccCCCEEEEe
Confidence 554444 3455556554
No 307
>PRK06720 hypothetical protein; Provisional
Probab=96.16 E-value=0.04 Score=45.46 Aligned_cols=76 Identities=17% Similarity=0.210 Sum_probs=50.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHh-------hCCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEA-------ADSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~~~ 245 (357)
+++.++|.|+ +++|...+..+...|++|+++.+++++.+...+. .+.. ...|..+.+.+.++ .+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5778999987 8999999988888899999999887655433222 3422 12344443333321 2368
Q ss_pred cEEEEcCCCC
Q 018382 246 DYIIDTVPAN 255 (357)
Q Consensus 246 d~v~d~~g~~ 255 (357)
|++++++|..
T Consensus 95 DilVnnAG~~ 104 (169)
T PRK06720 95 DMLFQNAGLY 104 (169)
T ss_pred CEEEECCCcC
Confidence 9999988754
No 308
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.16 E-value=0.025 Score=50.46 Aligned_cols=77 Identities=23% Similarity=0.163 Sum_probs=57.1
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EE-------cCCChhH----HHHh---h
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YL-------VSSDATR----MQEA---A 242 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv-------~~~~~~~----~~~~---~ 242 (357)
++...++|+|+ .++|++.+.-++..|++|++++++.++...+.++++... +. |..+.+. ++++ .
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence 45578999965 999999999999999999999999999998888777321 11 2222222 2222 2
Q ss_pred CCccEEEEcCCCC
Q 018382 243 DSLDYIIDTVPAN 255 (357)
Q Consensus 243 ~~~d~v~d~~g~~ 255 (357)
..+|.+|.|+|..
T Consensus 111 ~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 111 GPIDNLFCCAGVA 123 (331)
T ss_pred CCcceEEEecCcc
Confidence 4799999999874
No 309
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=96.16 E-value=0.039 Score=50.72 Aligned_cols=75 Identities=17% Similarity=0.153 Sum_probs=52.7
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHhcCC-c-E--EEcCCChhHHHHhhCCccEEEEcC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEHLGA-D-Q--YLVSSDATRMQEAADSLDYIIDTV 252 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~~g~-~-~--vv~~~~~~~~~~~~~~~d~v~d~~ 252 (357)
.+++|||+|+ |.+|..+++.+...| .+|++.++++.+...+.+.+.. . . ..|..+.+.+.+...++|+||.++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 4678999987 999999888877665 5898888776554433332321 1 1 236666666666667899999988
Q ss_pred CC
Q 018382 253 PA 254 (357)
Q Consensus 253 g~ 254 (357)
+.
T Consensus 83 g~ 84 (324)
T TIGR03589 83 AL 84 (324)
T ss_pred cc
Confidence 74
No 310
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.15 E-value=0.034 Score=49.24 Aligned_cols=75 Identities=21% Similarity=0.365 Sum_probs=50.5
Q ss_pred CCCeEEEEecC---hHHHHHHHHHHHcCCeEEEEeCCcHH---HHHHHHhcCCcEE--EcCCChhHHHH----hh---CC
Q 018382 180 SGLRGGILGLG---GVGHMGVLIAKAMGHHVTVISSSDKK---RVEAMEHLGADQY--LVSSDATRMQE----AA---DS 244 (357)
Q Consensus 180 ~~~~VlI~G~g---~~G~~ai~la~~~g~~V~~~~~~~~~---~~~~~~~~g~~~v--v~~~~~~~~~~----~~---~~ 244 (357)
.++++||+|++ ++|.++++.+...|++|+++.++++. .+.+.++++.... .|..+.+.+++ +. +.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57899999863 89999999988899999999887543 2333333443222 35555443332 22 36
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++++++|.
T Consensus 89 ld~lv~nAg~ 98 (258)
T PRK07533 89 LDFLLHSIAF 98 (258)
T ss_pred CCEEEEcCcc
Confidence 8999999874
No 311
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.14 E-value=0.023 Score=50.45 Aligned_cols=106 Identities=18% Similarity=0.248 Sum_probs=70.1
Q ss_pred hhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH---hcCCc-EE-EcCCChhHHHHhh
Q 018382 168 VFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME---HLGAD-QY-LVSSDATRMQEAA 242 (357)
Q Consensus 168 a~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~---~~g~~-~v-v~~~~~~~~~~~~ 242 (357)
+...+.....++||++||=+|+|- |.+++.+|+..|++|+.++-|++..+.+++ ..|.. ++ +...+ .+...
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d---~rd~~ 135 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD---YRDFE 135 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc---ccccc
Confidence 444444455569999999999865 667888889999999999999987766654 24532 11 11111 12233
Q ss_pred CCccEEE-----EcCCCC---CChHHHHhccccCCeEEEEccC
Q 018382 243 DSLDYII-----DTVPAN---HPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 243 ~~~d~v~-----d~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
+.||-|+ +.+|.. ..+..+.+.|+++|++++-...
T Consensus 136 e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~ 178 (283)
T COG2230 136 EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT 178 (283)
T ss_pred cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence 4577764 345553 2456788899999998876544
No 312
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.041 Score=47.77 Aligned_cols=75 Identities=9% Similarity=0.064 Sum_probs=52.5
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHH----hh---C-C
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQE----AA---D-S 244 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~----~~---~-~ 244 (357)
++++++|+|+ +++|.+.+..+...|++|+++.+++++.+.+.++ .+.+ ...|..+.+.+++ +. + .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5688999987 8999999988888999999999988876554332 3432 1234445443332 21 3 6
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++|+++|.
T Consensus 84 iD~li~nag~ 93 (227)
T PRK08862 84 PDVLVNNWTS 93 (227)
T ss_pred CCEEEECCcc
Confidence 9999999863
No 313
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.11 E-value=0.036 Score=47.16 Aligned_cols=91 Identities=18% Similarity=0.179 Sum_probs=54.4
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc-------------------HHHHHHHHh---cCC-cEE--EcCC
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD-------------------KKRVEAMEH---LGA-DQY--LVSS 233 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~-------------------~~~~~~~~~---~g~-~~v--v~~~ 233 (357)
...+|+|+|+|++|..+++.+...|. ++++++... .|.+.+.++ +.. ..+ ++..
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 45789999999999999999999998 788887652 222222222 221 111 1111
Q ss_pred -ChhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCe
Q 018382 234 -DATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGK 270 (357)
Q Consensus 234 -~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~ 270 (357)
+++.+.+...++|+||+|..+.......-+.++..++
T Consensus 100 i~~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~i 137 (202)
T TIGR02356 100 VTAENLELLINNVDLVLDCTDNFATRYLINDACVALGT 137 (202)
T ss_pred CCHHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC
Confidence 1233444556899999999876332233333344443
No 314
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.11 E-value=0.045 Score=48.23 Aligned_cols=74 Identities=18% Similarity=0.166 Sum_probs=50.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHhcCCc-EEEcCCChhHHHHhh-------CCccEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEHLGAD-QYLVSSDATRMQEAA-------DSLDYII 249 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~~g~~-~vv~~~~~~~~~~~~-------~~~d~v~ 249 (357)
.+++++|+|+ |++|.++++.+...|++|+++.+..+ ..+.+.+ .+.. ...|..+++.++++. +++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE-KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh-CCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4688999987 99999999999888999988765543 3333433 3432 234555654433321 3689999
Q ss_pred EcCCC
Q 018382 250 DTVPA 254 (357)
Q Consensus 250 d~~g~ 254 (357)
.++|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 99875
No 315
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.035 Score=48.64 Aligned_cols=74 Identities=20% Similarity=0.162 Sum_probs=50.8
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc-----CCc-E--EEcCCChhHHHH----h---hCC
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL-----GAD-Q--YLVSSDATRMQE----A---ADS 244 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~-----g~~-~--vv~~~~~~~~~~----~---~~~ 244 (357)
++++||+|+ |++|..+++.+...|++|+++++++++.+.+...+ +.. + ..|..+.+.+.+ + .++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467999987 99999988888888999999999887665543322 211 1 235555443322 2 237
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++|.++|-
T Consensus 82 id~vi~~ag~ 91 (248)
T PRK08251 82 LDRVIVNAGI 91 (248)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 316
>PRK07574 formate dehydrogenase; Provisional
Probab=96.09 E-value=0.038 Score=51.74 Aligned_cols=89 Identities=19% Similarity=0.210 Sum_probs=63.2
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP-- 257 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~-- 257 (357)
.|++|.|+|.|.+|..+++.++.+|++|++..++....+...+ +|.... ..++++....|+|+.+......
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~-~g~~~~------~~l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQE-LGLTYH------VSFDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhh-cCceec------CCHHHHhhcCCEEEEcCCCCHHHH
Confidence 5788999999999999999999999999999987533332333 554321 1245566678999888765422
Q ss_pred --h-HHHHhccccCCeEEEEc
Q 018382 258 --L-EPYLSLLKLDGKLILTG 275 (357)
Q Consensus 258 --~-~~~~~~l~~~G~~v~~g 275 (357)
+ ...+..|+++..+|.++
T Consensus 264 ~li~~~~l~~mk~ga~lIN~a 284 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTA 284 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECC
Confidence 2 34677888888877764
No 317
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.08 E-value=0.041 Score=47.98 Aligned_cols=75 Identities=20% Similarity=0.249 Sum_probs=53.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc---EEEcCCChhHHHHh-------hCCccEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSDATRMQEA-------ADSLDYI 248 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~~~d~v 248 (357)
+++++||+|+ |.+|..+++.+...|+.|+...++.++.+.+....+.. ...|..+.+.++++ ..++|++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999987 99999999998888999988888877766655445432 12344554433332 2369999
Q ss_pred EEcCCC
Q 018382 249 IDTVPA 254 (357)
Q Consensus 249 ~d~~g~ 254 (357)
|.++|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999875
No 318
>PRK07985 oxidoreductase; Provisional
Probab=96.08 E-value=0.077 Score=48.00 Aligned_cols=75 Identities=15% Similarity=0.107 Sum_probs=48.8
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc--HHHHHHHH---hcCCc---EEEcCCChhHHHH----h---hC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD--KKRVEAME---HLGAD---QYLVSSDATRMQE----A---AD 243 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~--~~~~~~~~---~~g~~---~vv~~~~~~~~~~----~---~~ 243 (357)
+++++||+|+ |++|.++++.+...|++|+++.+++ ++.+.+.+ ..|.. ...|..+.+.+.+ + .+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5678999987 9999999999988999999876543 22222222 23422 2235555443322 2 23
Q ss_pred CccEEEEcCCC
Q 018382 244 SLDYIIDTVPA 254 (357)
Q Consensus 244 ~~d~v~d~~g~ 254 (357)
++|+++.++|.
T Consensus 128 ~id~lv~~Ag~ 138 (294)
T PRK07985 128 GLDIMALVAGK 138 (294)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 319
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.08 E-value=0.055 Score=45.13 Aligned_cols=40 Identities=20% Similarity=0.233 Sum_probs=32.6
Q ss_pred eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH
Q 018382 183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME 222 (357)
Q Consensus 183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~ 222 (357)
+|.|+|+|.+|...++++...|.+|++.+.+++..+...+
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~ 40 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEALERARK 40 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHHHHhhhh
Confidence 5889999999999999998889999999999887655544
No 320
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.039 Score=48.67 Aligned_cols=75 Identities=17% Similarity=0.169 Sum_probs=52.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHH---hcCCc---EEEcCCChhHHHHhh-------CC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHH-VTVISSSDKKRVEAME---HLGAD---QYLVSSDATRMQEAA-------DS 244 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~-V~~~~~~~~~~~~~~~---~~g~~---~vv~~~~~~~~~~~~-------~~ 244 (357)
.+++++|+|+ |++|..+++.+...|++ |+++.+++++...... ..+.. ..+|..+++.+.++. ++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5688999987 99999999999999998 9999887665443222 13432 234665554433321 36
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++|+++|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999875
No 321
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.038 Score=48.80 Aligned_cols=77 Identities=17% Similarity=0.076 Sum_probs=50.3
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcHH-HHHHHHh---cCC-c-EE--EcCCChhH----HHHhh--
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDKK-RVEAMEH---LGA-D-QY--LVSSDATR----MQEAA-- 242 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~~-~~~~~~~---~g~-~-~v--v~~~~~~~----~~~~~-- 242 (357)
-.+++|||+|+ |++|.++++-+... |++|+++++++++ .+.+.++ .+. + ++ +|..+.+. ++++.
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 56778999987 99999999877666 4899999998775 4433222 232 1 22 35544433 23322
Q ss_pred CCccEEEEcCCCC
Q 018382 243 DSLDYIIDTVPAN 255 (357)
Q Consensus 243 ~~~d~v~d~~g~~ 255 (357)
+++|+++.++|..
T Consensus 86 g~id~li~~ag~~ 98 (253)
T PRK07904 86 GDVDVAIVAFGLL 98 (253)
T ss_pred CCCCEEEEeeecC
Confidence 3799999877653
No 322
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.06 E-value=0.033 Score=49.16 Aligned_cols=74 Identities=12% Similarity=0.188 Sum_probs=50.4
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHH---HhcCCc---EEEcCCChhHHHHhh-------CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAM---EHLGAD---QYLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~---~~~g~~---~vv~~~~~~~~~~~~-------~~~ 245 (357)
.++++||+|+ |++|.+.++.+...|++|+++.+++ +.+.+. ...+.+ ...|..+.+.+++.. +++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999987 9999999999999999999998873 322222 223422 224555544333322 368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|+++.++|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999998875
No 323
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.05 E-value=0.043 Score=49.01 Aligned_cols=75 Identities=17% Similarity=0.195 Sum_probs=52.1
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc-E--EEcCCChhHHHHh-------hCCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD-Q--YLVSSDATRMQEA-------ADSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--vv~~~~~~~~~~~-------~~~~ 245 (357)
++++++|+|+ |++|.++++.+...|++|+++.+++++.+.+.+. .+.. . ..|..+.+.+..+ .+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5688999987 9999999999988999999999987665544332 2322 1 2344444333322 1379
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (278)
T PRK08277 89 DILINGAGG 97 (278)
T ss_pred CEEEECCCC
Confidence 999999873
No 324
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.05 E-value=0.04 Score=47.33 Aligned_cols=117 Identities=11% Similarity=-0.007 Sum_probs=70.2
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP 257 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (357)
-++.+|||+|+|.++.-=++.+...|++|++++..-. ....+.+ .|.-..+. +. +-..-..++++||-+++.. .
T Consensus 23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~-~~~i~~~~-r~--~~~~dl~g~~LViaATdD~-~ 97 (223)
T PRK05562 23 SNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKK-YGNLKLIK-GN--YDKEFIKDKHLIVIATDDE-K 97 (223)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHh-CCCEEEEe-CC--CChHHhCCCcEEEECCCCH-H
Confidence 3578999999999998888888889999999986543 2333333 34322221 11 1112235899999999887 4
Q ss_pred hH-HHHhccccCCeEEEEccCCCCcccchHHHh-hccceEEEEee
Q 018382 258 LE-PYLSLLKLDGKLILTGVINTPMQFLTPMVM-LGRKAITGSFI 300 (357)
Q Consensus 258 ~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~g~~~ 300 (357)
++ ......+..+.++.........+|-.+.++ ...+++.-+..
T Consensus 98 vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~ 142 (223)
T PRK05562 98 LNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTK 142 (223)
T ss_pred HHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECC
Confidence 55 444555555777766443333444333333 33455544443
No 325
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.062 Score=47.21 Aligned_cols=39 Identities=15% Similarity=0.133 Sum_probs=31.1
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEe-CCcHHHH
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVIS-SSDKKRV 218 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~-~~~~~~~ 218 (357)
.++++||+|+ +++|.++++.+...|++|++.. +..++.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~ 43 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAE 43 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHH
Confidence 4678999987 9999999999999999998865 4444433
No 326
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.04 E-value=0.028 Score=57.06 Aligned_cols=110 Identities=16% Similarity=0.160 Sum_probs=70.9
Q ss_pred ccceEEEeeCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC
Q 018382 134 GFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS 212 (357)
Q Consensus 134 ~~~~~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~ 212 (357)
++.+|.-+++...|.+ +..+++++=.-... .... -.++++||+|+ |++|.++++.+...|++|+++++
T Consensus 378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~---------~~~~-l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r 446 (676)
T TIGR02632 378 AVSEYVSLPEQEAFDI-EYWPLEEAKLRRMP---------KEKT-LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADL 446 (676)
T ss_pred cccceecCchhhccch-hhhhhhHHhhccCC---------CCcC-CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeC
Confidence 3456777777777777 66666665321100 0111 24789999987 99999999988888999999999
Q ss_pred CcHHHHHHHHhc----CCc----EEEcCCChhHHHHhh-------CCccEEEEcCCC
Q 018382 213 SDKKRVEAMEHL----GAD----QYLVSSDATRMQEAA-------DSLDYIIDTVPA 254 (357)
Q Consensus 213 ~~~~~~~~~~~~----g~~----~vv~~~~~~~~~~~~-------~~~d~v~d~~g~ 254 (357)
+.++.+.+.+.+ +.. ...|..+.+.+++.. +++|++++++|.
T Consensus 447 ~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 447 NLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 877665443322 321 124555554433322 379999999985
No 327
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.04 E-value=0.05 Score=46.77 Aligned_cols=95 Identities=23% Similarity=0.305 Sum_probs=60.8
Q ss_pred CCCCCeEEEEecChHHHHHHHHHHHcCC--eEEEEeCCcHHHHHHHHh---cCCcE--EEcCCChhHHHHhhCCccEEEE
Q 018382 178 KQSGLRGGILGLGGVGHMGVLIAKAMGH--HVTVISSSDKKRVEAMEH---LGADQ--YLVSSDATRMQEAADSLDYIID 250 (357)
Q Consensus 178 ~~~~~~VlI~G~g~~G~~ai~la~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~--vv~~~~~~~~~~~~~~~d~v~d 250 (357)
++++++||-+|+|. |..++.+++..+. +|+.++.+++..+.+++. .|.+. ++..+..+.. .....||+|+-
T Consensus 75 ~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~-~~~~~fD~Ii~ 152 (215)
T TIGR00080 75 LKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGW-EPLAPYDRIYV 152 (215)
T ss_pred CCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCC-cccCCCCEEEE
Confidence 48999999998753 5666677776653 699999888866655543 34322 2211111111 11247999875
Q ss_pred cCCCCCChHHHHhccccCCeEEEE
Q 018382 251 TVPANHPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~ 274 (357)
............+.|+++|+++..
T Consensus 153 ~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 153 TAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred cCCcccccHHHHHhcCcCcEEEEE
Confidence 544443667788999999998764
No 328
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.03 E-value=0.038 Score=48.73 Aligned_cols=74 Identities=14% Similarity=0.161 Sum_probs=49.2
Q ss_pred CCCeEEEEecC---hHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-c---EEEcCCChhHHH----Hhh---CCc
Q 018382 180 SGLRGGILGLG---GVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-D---QYLVSSDATRMQ----EAA---DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~g---~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~---~vv~~~~~~~~~----~~~---~~~ 245 (357)
.++++||+|++ ++|.++++.+...|++|+++.+++...+.+.+ +.. . ..+|..+.+.++ ++. +.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQK-LVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHh-hccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57889999863 89999999998899999999887433333333 321 1 123555544333 222 369
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++++++|.
T Consensus 85 D~lv~nAg~ 93 (252)
T PRK06079 85 DGIVHAIAY 93 (252)
T ss_pred CEEEEcccc
Confidence 999998874
No 329
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.03 E-value=0.017 Score=45.03 Aligned_cols=82 Identities=24% Similarity=0.283 Sum_probs=52.1
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEe-CCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVIS-SSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL 258 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~-~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (357)
+.-+|-|+|+|-+|..+...++..|.+|..+. ++.+..+++...++...+.+. .++....|++|-++.+. .+
T Consensus 9 ~~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~------~~~~~~aDlv~iavpDd-aI 81 (127)
T PF10727_consen 9 ARLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDL------EEILRDADLVFIAVPDD-AI 81 (127)
T ss_dssp ---EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----T------TGGGCC-SEEEE-S-CC-HH
T ss_pred CccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccc------ccccccCCEEEEEechH-HH
Confidence 44678999999999999999999999988875 444455666554565444332 23456899999999998 77
Q ss_pred HHHHhccccC
Q 018382 259 EPYLSLLKLD 268 (357)
Q Consensus 259 ~~~~~~l~~~ 268 (357)
...++.|...
T Consensus 82 ~~va~~La~~ 91 (127)
T PF10727_consen 82 AEVAEQLAQY 91 (127)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHHh
Confidence 7766666654
No 330
>PLN02366 spermidine synthase
Probab=96.03 E-value=0.053 Score=49.26 Aligned_cols=95 Identities=13% Similarity=0.083 Sum_probs=60.5
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC---------cEEEcCCChhHHHHh-hCCccE
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA---------DQYLVSSDATRMQEA-ADSLDY 247 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~---------~~vv~~~~~~~~~~~-~~~~d~ 247 (357)
...++|||+|+|. |..+..++++-+. +|+++..+++-.+.+++.++. -.++..+...++++. .+.+|+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 4568899998765 5566777887665 788888877666666664432 112222222345544 347999
Q ss_pred EEEcCCCC----------CChHHHHhccccCCeEEEE
Q 018382 248 IIDTVPAN----------HPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 248 v~d~~g~~----------~~~~~~~~~l~~~G~~v~~ 274 (357)
||--.... +.++.+.++|+++|.++.-
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q 205 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ 205 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence 97533221 1366788899999999764
No 331
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.02 E-value=0.04 Score=50.56 Aligned_cols=94 Identities=18% Similarity=0.197 Sum_probs=65.2
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHH-HcCC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAK-AMGH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN 255 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~-~~g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~ 255 (357)
-.+++|+|+|+ |.+|..+++.+. ..|+ +++++.+++++...+.++++...+. .+.+.....|+|+.+++..
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALPEADIVVWVASMP 226 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHccCCEEEECCcCC
Confidence 46789999998 899999888886 4565 8999999888887776656522221 2334455799999988875
Q ss_pred CChHHHHhccccCCeEEEEccCC
Q 018382 256 HPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 256 ~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
..+..-.+.+++.-.+++++.+.
T Consensus 227 ~~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 227 KGVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred cCCcCCHHHhCCCeEEEEecCCC
Confidence 34322334556667777787653
No 332
>PRK00811 spermidine synthase; Provisional
Probab=96.00 E-value=0.088 Score=47.37 Aligned_cols=95 Identities=20% Similarity=0.189 Sum_probs=61.8
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC-------c---EEEcCCChhHHHHhhCCccE
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA-------D---QYLVSSDATRMQEAADSLDY 247 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~-------~---~vv~~~~~~~~~~~~~~~d~ 247 (357)
...++||++|+|. |..+..+++..+. +|+++..+++-.+.+++.+.. + .++..+...+++...+.+|+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv 153 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDV 153 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccE
Confidence 3457899998754 6666777777665 899999988877777765531 1 22222223344443457999
Q ss_pred EEEcCCCC----------CChHHHHhccccCCeEEEE
Q 018382 248 IIDTVPAN----------HPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 248 v~d~~g~~----------~~~~~~~~~l~~~G~~v~~ 274 (357)
|+--.... +.++.+.+.|+++|.++..
T Consensus 154 Ii~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 154 IIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred EEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 97533211 1245678899999998864
No 333
>PRK08291 ectoine utilization protein EutC; Validated
Probab=96.00 E-value=0.071 Score=49.11 Aligned_cols=94 Identities=20% Similarity=0.255 Sum_probs=61.3
Q ss_pred CCCCeEEEEecChHHHHHHHHHHH-cCC-eEEEEeCCcHHHHHHHHhc----CCcEEEcCCChhHHHHhhCCccEEEEcC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKA-MGH-HVTVISSSDKKRVEAMEHL----GADQYLVSSDATRMQEAADSLDYIIDTV 252 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~-~g~-~V~~~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~~~d~v~d~~ 252 (357)
+...+++|+|+|..|.+.+..+.. .+. +|.+..++.++.+.+.+.+ |.. +....+ +++.....|+|+.++
T Consensus 130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d---~~~al~~aDiVi~aT 205 (330)
T PRK08291 130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARD---VHEAVAGADIIVTTT 205 (330)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCC---HHHHHccCCEEEEee
Confidence 445789999999999987776664 565 7889999988877766544 432 211222 234445789999988
Q ss_pred CCCCChHHHHhccccCCeEEEEccC
Q 018382 253 PANHPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 253 g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
.....+-. ...++++-.+..+|..
T Consensus 206 ~s~~p~i~-~~~l~~g~~v~~vg~d 229 (330)
T PRK08291 206 PSEEPILK-AEWLHPGLHVTAMGSD 229 (330)
T ss_pred CCCCcEec-HHHcCCCceEEeeCCC
Confidence 77533221 1346776666666653
No 334
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.043 Score=47.84 Aligned_cols=75 Identities=17% Similarity=0.203 Sum_probs=52.1
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHh-------hCCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEA-------ADSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~~~ 245 (357)
..+++||+|+ |.+|..++..+...|.+|+++++++++.+.+.+. .+.. ...|..+.+.+... .+.+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999987 9999999999988999999999987765544332 2221 12355554433222 1369
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|+++.++|.
T Consensus 85 d~lv~~ag~ 93 (241)
T PRK07454 85 DVLINNAGM 93 (241)
T ss_pred CEEEECCCc
Confidence 999999885
No 335
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.99 E-value=0.041 Score=50.30 Aligned_cols=74 Identities=22% Similarity=0.211 Sum_probs=52.3
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCC--c--E--EEcCCChhHHH----Hh---hCCc
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGA--D--Q--YLVSSDATRMQ----EA---ADSL 245 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~--~--~--vv~~~~~~~~~----~~---~~~~ 245 (357)
++++||+|+ +++|.++++.+...| ++|+++++++++.+.+.+.++. . + ..|..+.+.++ ++ .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 568999987 999999988888889 8999999988877666554431 1 1 24555544332 22 2369
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++++++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999998874
No 336
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.99 E-value=0.04 Score=48.88 Aligned_cols=75 Identities=15% Similarity=0.165 Sum_probs=53.0
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhh-------CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~-------~~~ 245 (357)
.++++||+|+ +++|.+++..+...|++|+++.+++++.+...+. .|.. ...|..+.+.+++.. +++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5688999987 9999998888888899999999887766544432 2432 234555544333322 368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|+++.++|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999875
No 337
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=95.98 E-value=0.037 Score=50.68 Aligned_cols=75 Identities=16% Similarity=0.109 Sum_probs=51.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC---cEE--EcCCChhHHHHhhCCccEEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA---DQY--LVSSDATRMQEAADSLDYIID 250 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~---~~v--v~~~~~~~~~~~~~~~d~v~d 250 (357)
.|++|||+|+ |.+|..+++.+...|.+|+++.++..+.+...+. .+. -.+ .|..+.+.+.++..++|+||.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4689999987 9999999998888899999888876543322221 111 111 244455556666668999999
Q ss_pred cCCC
Q 018382 251 TVPA 254 (357)
Q Consensus 251 ~~g~ 254 (357)
+++.
T Consensus 84 ~A~~ 87 (322)
T PLN02986 84 TASP 87 (322)
T ss_pred eCCC
Confidence 8864
No 338
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.97 E-value=0.046 Score=48.14 Aligned_cols=75 Identities=20% Similarity=0.217 Sum_probs=52.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHH----hh---CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQE----AA---DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~----~~---~~~ 245 (357)
++++++|+|+ |++|..+++.+...|++|+++.+++++.+.+.++ .+.. ...|..+.+.+.+ +. +.+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999987 9999999998888899999999987665443321 3421 1235555443332 21 368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|+++.++|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999999885
No 339
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.97 E-value=0.042 Score=51.02 Aligned_cols=87 Identities=15% Similarity=0.059 Sum_probs=57.1
Q ss_pred hhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHH----HHHHHhcCC------cE-EEcCCC
Q 018382 167 TVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKR----VEAMEHLGA------DQ-YLVSSD 234 (357)
Q Consensus 167 ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~----~~~~~~~g~------~~-vv~~~~ 234 (357)
|||.-|+..-. -+.++|||+|+ |-+|..++..+...|.+|+++++..... .......+. .. ..|..+
T Consensus 2 ~~~~~~~~~~~-~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (348)
T PRK15181 2 TAYEELRTKLV-LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK 80 (348)
T ss_pred chhhhhhhccc-ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence 56665544444 56689999987 9999999999998899999998754321 111111111 11 125555
Q ss_pred hhHHHHhhCCccEEEEcCCC
Q 018382 235 ATRMQEAADSLDYIIDTVPA 254 (357)
Q Consensus 235 ~~~~~~~~~~~d~v~d~~g~ 254 (357)
.+.+..+..++|+||.+++.
T Consensus 81 ~~~l~~~~~~~d~ViHlAa~ 100 (348)
T PRK15181 81 FTDCQKACKNVDYVLHQAAL 100 (348)
T ss_pred HHHHHHHhhCCCEEEECccc
Confidence 55566666689999998864
No 340
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.97 E-value=0.04 Score=48.18 Aligned_cols=76 Identities=18% Similarity=0.238 Sum_probs=51.2
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc-E--EEcCCChhHHHHhh-------CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD-Q--YLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--vv~~~~~~~~~~~~-------~~~ 245 (357)
.++++||+|+ |.+|..++..+...|++|++++++.++.....+. .+.+ . ..|..+.+.+.+.. ..+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999987 9999999998888899999999986654333221 2321 1 23555544333322 368
Q ss_pred cEEEEcCCCC
Q 018382 246 DYIIDTVPAN 255 (357)
Q Consensus 246 d~v~d~~g~~ 255 (357)
|++|.+++..
T Consensus 85 d~vi~~ag~~ 94 (251)
T PRK12826 85 DILVANAGIF 94 (251)
T ss_pred CEEEECCCCC
Confidence 9999988653
No 341
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.97 E-value=0.041 Score=47.24 Aligned_cols=96 Identities=16% Similarity=0.096 Sum_probs=60.6
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE--------------cCCChhHH---HHh
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL--------------VSSDATRM---QEA 241 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv--------------~~~~~~~~---~~~ 241 (357)
.++.+||+.|+|. |.-++-+|. .|.+|++++.++...+.+.++-+..... +....+.. ...
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 110 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAAD 110 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCccc
Confidence 4678999999863 666777765 5999999999999887754434421100 00000110 011
Q ss_pred hCCccEEEEcCCC--------CCChHHHHhccccCCeEEEEcc
Q 018382 242 ADSLDYIIDTVPA--------NHPLEPYLSLLKLDGKLILTGV 276 (357)
Q Consensus 242 ~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~g~ 276 (357)
...+|.|+|+..- ...+....+.|+|+|+++.++.
T Consensus 111 ~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 111 LGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred CCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 2358999996531 1245678889999998776654
No 342
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.96 E-value=0.049 Score=48.98 Aligned_cols=96 Identities=18% Similarity=0.201 Sum_probs=71.6
Q ss_pred ccccchhhhhhhhhhccCCCCCCCeEEEEe-cChHHHHHHHHHHHcCCeEEEEe-CCcHHHHHHHHhcCCcEEEcCCChh
Q 018382 159 APLLCAGVTVFSPLSHFGLKQSGLRGGILG-LGGVGHMGVLIAKAMGHHVTVIS-SSDKKRVEAMEHLGADQYLVSSDAT 236 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G-~g~~G~~ai~la~~~g~~V~~~~-~~~~~~~~~~~~~g~~~vv~~~~~~ 236 (357)
+.+||.....+..|+....--.|++|+|+| .+.+|.-++.++...|+.|++.. ++.+
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~--------------------- 194 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD--------------------- 194 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC---------------------
Confidence 456777666666676665446899999999 59999999999999999999874 3311
Q ss_pred HHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 237 RMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 237 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
+++.....|+|+-++|....+... .++++..++++|...
T Consensus 195 -l~e~~~~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin~ 233 (296)
T PRK14188 195 -LPAVCRRADILVAAVGRPEMVKGD--WIKPGATVIDVGINR 233 (296)
T ss_pred -HHHHHhcCCEEEEecCChhhcchh--eecCCCEEEEcCCcc
Confidence 233445689999999998555443 388988999888643
No 343
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.043 Score=49.07 Aligned_cols=73 Identities=18% Similarity=0.217 Sum_probs=49.7
Q ss_pred CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh----h--CCccEEE
Q 018382 182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA----A--DSLDYII 249 (357)
Q Consensus 182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~----~--~~~d~v~ 249 (357)
++++|+|+|++|.+++..+. .|++|+++++++++.+.+.+++ |.+ ...|..+.+.+..+ . +++|+++
T Consensus 3 k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li 81 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGLV 81 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEE
Confidence 56788898999999888885 7999999999877655443322 322 12355554433322 1 3699999
Q ss_pred EcCCCC
Q 018382 250 DTVPAN 255 (357)
Q Consensus 250 d~~g~~ 255 (357)
+++|..
T Consensus 82 ~nAG~~ 87 (275)
T PRK06940 82 HTAGVS 87 (275)
T ss_pred ECCCcC
Confidence 999853
No 344
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.037 Score=49.51 Aligned_cols=74 Identities=15% Similarity=0.190 Sum_probs=51.3
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC---cE--EEcCCChhHHHH---hh---CCc
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA---DQ--YLVSSDATRMQE---AA---DSL 245 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~---~~--vv~~~~~~~~~~---~~---~~~ 245 (357)
++++||+|+ |.+|...+..+...|++|++++++.++.+.+.+. .+. .+ ..|..+++.++. +. +++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 567999987 9999999999888899999999887765444331 221 11 235556544332 21 368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|+++.++|.
T Consensus 83 d~vv~~ag~ 91 (280)
T PRK06914 83 DLLVNNAGY 91 (280)
T ss_pred eEEEECCcc
Confidence 999999875
No 345
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=95.96 E-value=0.032 Score=51.14 Aligned_cols=75 Identities=17% Similarity=0.108 Sum_probs=52.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC---cEE--EcCCChhHHHHhhCCccEEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA---DQY--LVSSDATRMQEAADSLDYIID 250 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~---~~v--v~~~~~~~~~~~~~~~d~v~d 250 (357)
.+++|||+|+ |.+|..+++.+...|.+|++++++..+....... .+. .+. .|..+.+.+++...++|+||.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 5789999987 9999999999988899999887776543322111 121 122 255555556666668999999
Q ss_pred cCCC
Q 018382 251 TVPA 254 (357)
Q Consensus 251 ~~g~ 254 (357)
+++.
T Consensus 84 ~A~~ 87 (325)
T PLN02989 84 TASP 87 (325)
T ss_pred eCCC
Confidence 9874
No 346
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=95.96 E-value=0.068 Score=48.82 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=70.0
Q ss_pred hccCCCCCCCeEEEEecChHHHHHHHHHHHc-CC-eEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEE
Q 018382 173 SHFGLKQSGLRGGILGLGGVGHMGVLIAKAM-GH-HVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIID 250 (357)
Q Consensus 173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~-g~-~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d 250 (357)
+.+.+ +...++.|+|+|..+.+.++.++.. +. +|.+..++++..+.+.+.+......+....+..++...+.|+|+.
T Consensus 123 ~~LA~-~da~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt 201 (330)
T COG2423 123 KYLAR-KDASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVT 201 (330)
T ss_pred HHhcc-CCCcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEE
Confidence 44454 5567889999999999988888754 66 899999998877666543332211111122234566678999999
Q ss_pred cCCCCCChHHHHhccccCCeEEEEccC
Q 018382 251 TVPANHPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
|+.+...+ ...+.++++-.+..+|..
T Consensus 202 ~T~s~~Pi-l~~~~l~~G~hI~aiGad 227 (330)
T COG2423 202 ATPSTEPV-LKAEWLKPGTHINAIGAD 227 (330)
T ss_pred ecCCCCCe-ecHhhcCCCcEEEecCCC
Confidence 99887432 344678888888888764
No 347
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.96 E-value=0.0085 Score=57.77 Aligned_cols=93 Identities=12% Similarity=0.075 Sum_probs=59.7
Q ss_pred cCCCCCCCeEE----EEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhhCCccEE
Q 018382 175 FGLKQSGLRGG----ILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAADSLDYI 248 (357)
Q Consensus 175 ~~~~~~~~~Vl----I~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~d~v 248 (357)
..++++|+.+| |+|+ |++|.+++|+++..|++|+.+.+.+.+...... .+.+ .++|.+.....+++...+
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~l~~~~--- 103 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWG-DRFGALVFDATGITDPADLKALY--- 103 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcC-CcccEEEEECCCCCCHHHHHHHH---
Confidence 45568888888 7765 999999999999999999998766553322221 3333 455554422222211100
Q ss_pred EEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 249 IDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
..+...++.|.++|+++.++...
T Consensus 104 -------~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 104 -------EFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred -------HHHHHHHHhccCCCEEEEEcccc
Confidence 14455677888899999887654
No 348
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.12 Score=44.95 Aligned_cols=75 Identities=17% Similarity=0.139 Sum_probs=48.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHHH---hcCCc-E--EEcCCChhHHHHh-------hCC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAME---HLGAD-Q--YLVSSDATRMQEA-------ADS 244 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~~---~~g~~-~--vv~~~~~~~~~~~-------~~~ 244 (357)
+++++||+|+ |++|..+++.+...|++|+++.++... .+.+.+ ..+.. + ..|..+.+.+++. .++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5688999987 999999999999999998887765432 222221 13421 1 2344454333322 237
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++|.++|.
T Consensus 84 id~vi~~ag~ 93 (245)
T PRK12937 84 IDVLVNNAGV 93 (245)
T ss_pred CCEEEECCCC
Confidence 9999999875
No 349
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.054 Score=47.29 Aligned_cols=73 Identities=15% Similarity=-0.003 Sum_probs=50.4
Q ss_pred CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc--EEEcCCChhHHHHhh----CCccEEEEcCCC
Q 018382 182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD--QYLVSSDATRMQEAA----DSLDYIIDTVPA 254 (357)
Q Consensus 182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~----~~~d~v~d~~g~ 254 (357)
.+++|+|+ |++|...+..+...|++|+++++++++.+.+.+..... ...|..+.+.++++. ...|+++.++|.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~ 81 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD 81 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence 56899987 99999988888888999999999888776665532211 234566655444432 246777766653
No 350
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.05 Score=47.94 Aligned_cols=75 Identities=19% Similarity=0.178 Sum_probs=52.9
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC---Cc-EEEcCCChhHHHHhh-------CCccEE
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG---AD-QYLVSSDATRMQEAA-------DSLDYI 248 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g---~~-~vv~~~~~~~~~~~~-------~~~d~v 248 (357)
++++||+|+ |.+|..++..+...|++|++++++.++.+.+.+.+. .. ...|..+.+.+.... +++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999987 999999998888889999999998877665554342 11 134555554433221 268999
Q ss_pred EEcCCCC
Q 018382 249 IDTVPAN 255 (357)
Q Consensus 249 ~d~~g~~ 255 (357)
+.+.|..
T Consensus 82 i~~ag~~ 88 (257)
T PRK07074 82 VANAGAA 88 (257)
T ss_pred EECCCCC
Confidence 9998753
No 351
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.93 E-value=0.057 Score=47.67 Aligned_cols=75 Identities=24% Similarity=0.231 Sum_probs=49.7
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH--hcCCc---EEEcCCChhHHH----Hh---hCCcc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME--HLGAD---QYLVSSDATRMQ----EA---ADSLD 246 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~--~~g~~---~vv~~~~~~~~~----~~---~~~~d 246 (357)
+++++||+|+ |++|.++++.+...|++|+++++++...+...+ ..+.+ ...|..+.+.+. ++ .+++|
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 4688999987 999999999998899999999887532222211 13432 224555543322 22 13799
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
++++++|.
T Consensus 87 ~lv~nAg~ 94 (260)
T PRK12823 87 VLINNVGG 94 (260)
T ss_pred EEEECCcc
Confidence 99999873
No 352
>PLN02928 oxidoreductase family protein
Probab=95.92 E-value=0.046 Score=50.67 Aligned_cols=94 Identities=19% Similarity=0.153 Sum_probs=62.5
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC----C-cEEEc-CCChhHHHHhhCCccEEEEcCC
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG----A-DQYLV-SSDATRMQEAADSLDYIIDTVP 253 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g----~-~~vv~-~~~~~~~~~~~~~~d~v~d~~g 253 (357)
.|+++.|+|.|.+|..+++.++.+|++|++..++..+... .. ++ . ....+ ......+.++....|+|+.++.
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP 235 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPE-DG-LLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT 235 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhh-hh-hccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence 5789999999999999999999999999999876332111 10 11 0 00110 0112234556667999998876
Q ss_pred CC----CCh-HHHHhccccCCeEEEEc
Q 018382 254 AN----HPL-EPYLSLLKLDGKLILTG 275 (357)
Q Consensus 254 ~~----~~~-~~~~~~l~~~G~~v~~g 275 (357)
.. ..+ ...++.|+++..+|.++
T Consensus 236 lt~~T~~li~~~~l~~Mk~ga~lINva 262 (347)
T PLN02928 236 LTKETAGIVNDEFLSSMKKGALLVNIA 262 (347)
T ss_pred CChHhhcccCHHHHhcCCCCeEEEECC
Confidence 42 122 46788899998888774
No 353
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.92 E-value=0.039 Score=51.24 Aligned_cols=75 Identities=17% Similarity=0.159 Sum_probs=51.5
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC----Cc-EEEcCCChhHHHHhhC--CccEEEEc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG----AD-QYLVSSDATRMQEAAD--SLDYIIDT 251 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g----~~-~vv~~~~~~~~~~~~~--~~d~v~d~ 251 (357)
++++|||+|+ |.+|..+++.+...|.+|+++++++.......+.++ .. ...|..+.+.+.++.. ++|+||.+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 4688999987 999999999999999999999877654332221122 11 2235555555555443 58999999
Q ss_pred CCC
Q 018382 252 VPA 254 (357)
Q Consensus 252 ~g~ 254 (357)
++.
T Consensus 83 A~~ 85 (349)
T TIGR02622 83 AAQ 85 (349)
T ss_pred Ccc
Confidence 874
No 354
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.90 E-value=0.045 Score=48.57 Aligned_cols=75 Identities=13% Similarity=0.162 Sum_probs=49.4
Q ss_pred CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCcH---HHHHHHHhcCCc--EEEcCCChhHHHHh----h---CC
Q 018382 180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSDK---KRVEAMEHLGAD--QYLVSSDATRMQEA----A---DS 244 (357)
Q Consensus 180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~~---~~~~~~~~~g~~--~vv~~~~~~~~~~~----~---~~ 244 (357)
+++++||+|+ +++|.+.++.+...|++|+++.+.+. +.+.+.+..|.. ...|..+.+.++++ . ++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 5688999983 58999999988889999998766532 223333323422 23455555443332 2 37
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++++++|.
T Consensus 85 iD~lVnnAG~ 94 (261)
T PRK08690 85 LDGLVHSIGF 94 (261)
T ss_pred CcEEEECCcc
Confidence 9999999875
No 355
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.89 E-value=0.034 Score=45.33 Aligned_cols=74 Identities=22% Similarity=0.204 Sum_probs=47.4
Q ss_pred CeEEEEec-ChHHHHHHHHHHHcCC-eEEEEeCC--cHHHHHHHHh---cCCcE-E--EcCCChhHHHHh-------hCC
Q 018382 182 LRGGILGL-GGVGHMGVLIAKAMGH-HVTVISSS--DKKRVEAMEH---LGADQ-Y--LVSSDATRMQEA-------ADS 244 (357)
Q Consensus 182 ~~VlI~G~-g~~G~~ai~la~~~g~-~V~~~~~~--~~~~~~~~~~---~g~~~-v--v~~~~~~~~~~~-------~~~ 244 (357)
+++||+|+ +++|.+.++.+...|. +|+++.++ .++.+.+..+ .+... + .|..+.+.++++ .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 46899987 9999998888887777 77777877 3444433222 34321 2 244444333322 247
Q ss_pred ccEEEEcCCCC
Q 018382 245 LDYIIDTVPAN 255 (357)
Q Consensus 245 ~d~v~d~~g~~ 255 (357)
+|++|.++|..
T Consensus 81 ld~li~~ag~~ 91 (167)
T PF00106_consen 81 LDILINNAGIF 91 (167)
T ss_dssp ESEEEEECSCT
T ss_pred ccccccccccc
Confidence 99999998875
No 356
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.061 Score=46.83 Aligned_cols=43 Identities=21% Similarity=0.200 Sum_probs=36.2
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME 222 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~ 222 (357)
++++++|+|+ |++|...++.+...|++|+++++++++.+.+.+
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~ 48 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYD 48 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH
Confidence 4678999987 999999999998899999999999877655433
No 357
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.87 E-value=0.049 Score=48.39 Aligned_cols=75 Identities=15% Similarity=0.154 Sum_probs=49.2
Q ss_pred CCCeEEEEecC---hHHHHHHHHHHHcCCeEEEEeCCc---HHHHHHHHhcCCc--EEEcCCChhHHHHh----h---CC
Q 018382 180 SGLRGGILGLG---GVGHMGVLIAKAMGHHVTVISSSD---KKRVEAMEHLGAD--QYLVSSDATRMQEA----A---DS 244 (357)
Q Consensus 180 ~~~~VlI~G~g---~~G~~ai~la~~~g~~V~~~~~~~---~~~~~~~~~~g~~--~vv~~~~~~~~~~~----~---~~ 244 (357)
.++++||+|++ ++|.++++.+...|++|++..+++ +..+.+..+.+.. ...|..+++.++.+ . +.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 56889999873 899999888888899999887763 2223333323321 22466665443332 2 36
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++++++|-
T Consensus 85 iD~linnAg~ 94 (262)
T PRK07984 85 FDGFVHSIGF 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999999873
No 358
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.87 E-value=0.047 Score=48.10 Aligned_cols=75 Identities=15% Similarity=0.215 Sum_probs=52.7
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHh-------hCCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEA-------ADSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~~~ 245 (357)
.++++||+|+ +++|..++..+...|++|+++++++++.+.+.+. .+.+ ...|..+.+.+++. .+.+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999987 9999999998888999999999887765544321 3322 12455555443322 2368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|+++.++|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999874
No 359
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.86 E-value=0.047 Score=49.74 Aligned_cols=76 Identities=21% Similarity=0.257 Sum_probs=54.7
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC----Cc----EEEcCCChhHHHHh-------h
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG----AD----QYLVSSDATRMQEA-------A 242 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g----~~----~vv~~~~~~~~~~~-------~ 242 (357)
-.+.+++|+|+ +++|..++.-+...|++|+.++|+.++.+.+.++.. .. +.+|..+...++.. .
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 45678899998 999999999999999999999999877666655443 22 23455554333322 2
Q ss_pred CCccEEEEcCCC
Q 018382 243 DSLDYIIDTVPA 254 (357)
Q Consensus 243 ~~~d~v~d~~g~ 254 (357)
.+.|+.++.+|-
T Consensus 113 ~~ldvLInNAGV 124 (314)
T KOG1208|consen 113 GPLDVLINNAGV 124 (314)
T ss_pred CCccEEEeCccc
Confidence 378999987765
No 360
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.096 Score=47.28 Aligned_cols=76 Identities=18% Similarity=0.228 Sum_probs=49.4
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHH---HhcCCcE---EEcCCChhHHHHh----h---C
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAM---EHLGADQ---YLVSSDATRMQEA----A---D 243 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~---~~~g~~~---vv~~~~~~~~~~~----~---~ 243 (357)
-+++++||+|+ |++|..+++.+...|++|+++.+++++ .+... +..|... ..|..+.+.+.++ . .
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35788999987 999999998888889999998876532 22221 2134322 2344444433322 1 3
Q ss_pred CccEEEEcCCC
Q 018382 244 SLDYIIDTVPA 254 (357)
Q Consensus 244 ~~d~v~d~~g~ 254 (357)
.+|++|.++|.
T Consensus 124 ~iD~lI~~Ag~ 134 (290)
T PRK06701 124 RLDILVNNAAF 134 (290)
T ss_pred CCCEEEECCcc
Confidence 68999998875
No 361
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.028 Score=49.94 Aligned_cols=71 Identities=17% Similarity=0.199 Sum_probs=50.1
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhh-------CCccEEEEc
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAA-------DSLDYIIDT 251 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~-------~~~d~v~d~ 251 (357)
+++++|+|+ |++|..+++.+...|++|++++++.++.... .+.. ...|..+.+.++++. +.+|++|++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 467999987 9999999998888899999999876554321 2222 234555654443332 368999999
Q ss_pred CCC
Q 018382 252 VPA 254 (357)
Q Consensus 252 ~g~ 254 (357)
+|.
T Consensus 81 ag~ 83 (270)
T PRK06179 81 AGV 83 (270)
T ss_pred CCC
Confidence 985
No 362
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.86 E-value=0.15 Score=46.54 Aligned_cols=89 Identities=17% Similarity=0.114 Sum_probs=55.5
Q ss_pred CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh----------cCCc--EEEc-CCChhHHHHhhCCccE
Q 018382 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH----------LGAD--QYLV-SSDATRMQEAADSLDY 247 (357)
Q Consensus 181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~----------~g~~--~vv~-~~~~~~~~~~~~~~d~ 247 (357)
-++|.|+|+|.+|...++.+...|.+|++.+.+++..+.+.+. .|.. .... ..-.+.+++...+.|+
T Consensus 7 i~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl 86 (321)
T PRK07066 7 IKTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF 86 (321)
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence 3679999999999999999989999999999987765443221 1110 0000 0000123344468999
Q ss_pred EEEcCCCCCC-----hHHHHhccccCC
Q 018382 248 IIDTVPANHP-----LEPYLSLLKLDG 269 (357)
Q Consensus 248 v~d~~g~~~~-----~~~~~~~l~~~G 269 (357)
|++++..... +..+.+.++++-
T Consensus 87 ViEavpE~l~vK~~lf~~l~~~~~~~a 113 (321)
T PRK07066 87 IQESAPEREALKLELHERISRAAKPDA 113 (321)
T ss_pred EEECCcCCHHHHHHHHHHHHHhCCCCe
Confidence 9999987532 233444555554
No 363
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.85 E-value=0.039 Score=49.39 Aligned_cols=129 Identities=19% Similarity=0.276 Sum_probs=75.4
Q ss_pred CcceEECCCCCCccccccccchhhhhh--hhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHH
Q 018382 143 QKFVVKIPDGMALEQAAPLLCAGVTVF--SPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVE 219 (357)
Q Consensus 143 ~~~~~~lP~~l~~~~aa~~~~~~~ta~--~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~ 219 (357)
.+.++++.+++.+-..- ...|++ .+|.... +++++||=+|+|. |.++|..++. |+ +|++++-.+-..+.
T Consensus 129 ~~~~i~lDPGlAFGTG~----HpTT~lcL~~Le~~~--~~g~~vlDvGcGS-GILaIAa~kL-GA~~v~g~DiDp~AV~a 200 (300)
T COG2264 129 DELNIELDPGLAFGTGT----HPTTSLCLEALEKLL--KKGKTVLDVGCGS-GILAIAAAKL-GAKKVVGVDIDPQAVEA 200 (300)
T ss_pred CceEEEEccccccCCCC----ChhHHHHHHHHHHhh--cCCCEEEEecCCh-hHHHHHHHHc-CCceEEEecCCHHHHHH
Confidence 36678887777654332 223322 2333333 5999999999853 6666666655 77 79999877766555
Q ss_pred HHHhcCCcEEE--c-CCChhHHHHhh-CCccEEEEcC-CCC--CChHHHHhccccCCeEEEEccCCC
Q 018382 220 AMEHLGADQYL--V-SSDATRMQEAA-DSLDYIIDTV-PAN--HPLEPYLSLLKLDGKLILTGVINT 279 (357)
Q Consensus 220 ~~~~~g~~~vv--~-~~~~~~~~~~~-~~~d~v~d~~-g~~--~~~~~~~~~l~~~G~~v~~g~~~~ 279 (357)
++++.-.+.+- . ........... +.+|+|+-.. .+. .+.....+.++|+|++++-|....
T Consensus 201 a~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~~ 267 (300)
T COG2264 201 ARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILED 267 (300)
T ss_pred HHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehHh
Confidence 54422222111 0 11111122233 3799998654 221 134567788999999999887654
No 364
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.84 E-value=0.064 Score=49.87 Aligned_cols=76 Identities=14% Similarity=0.121 Sum_probs=54.1
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc--CC-cEE--EcCCChhHHHHhhCCccEEEEcC
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL--GA-DQY--LVSSDATRMQEAADSLDYIIDTV 252 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~--g~-~~v--v~~~~~~~~~~~~~~~d~v~d~~ 252 (357)
..+.+|||+|+ |.+|..+++.+...|.+|+++.++..+...+...+ +. -.+ .|..+.+.+.++..++|+||.++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 45778999986 99999999999888999999888766554443322 11 112 24445555666666899999988
Q ss_pred CC
Q 018382 253 PA 254 (357)
Q Consensus 253 g~ 254 (357)
+.
T Consensus 88 ~~ 89 (353)
T PLN02896 88 AS 89 (353)
T ss_pred cc
Confidence 64
No 365
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.83 E-value=0.058 Score=47.67 Aligned_cols=75 Identities=15% Similarity=0.188 Sum_probs=50.8
Q ss_pred CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCc--HHHHHHHHhcCCc---EEEcCCChhHHHHh----h---CC
Q 018382 180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSD--KKRVEAMEHLGAD---QYLVSSDATRMQEA----A---DS 244 (357)
Q Consensus 180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~--~~~~~~~~~~g~~---~vv~~~~~~~~~~~----~---~~ 244 (357)
.+++++|+|+ +++|.++++.+...|++|+++++++ +..+.+.+.++.. ...|..+++.++++ . +.
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999985 7999999998888999999988654 3334444435421 22455555433332 2 37
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++++++|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999998875
No 366
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.83 E-value=0.11 Score=41.26 Aligned_cols=98 Identities=15% Similarity=0.116 Sum_probs=71.0
Q ss_pred cccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChh
Q 018382 158 AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDAT 236 (357)
Q Consensus 158 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~ 236 (357)
...+|+........++..+.--.|++|+|+|- ..+|.-++.++...|++|+...+....
T Consensus 5 ~~~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~-------------------- 64 (140)
T cd05212 5 PLFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQ-------------------- 64 (140)
T ss_pred CcccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcC--------------------
Confidence 34566666666666666655458999999986 899999999999999999988753211
Q ss_pred HHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 237 RMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 237 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
+++.....|+|+-++|....+. .+.++++-.++.+|...
T Consensus 65 -l~~~v~~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 65 -LQSKVHDADVVVVGSPKPEKVP--TEWIKPGATVINCSPTK 103 (140)
T ss_pred -HHHHHhhCCEEEEecCCCCccC--HHHcCCCCEEEEcCCCc
Confidence 2233456899999999874433 46789998888877654
No 367
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=95.82 E-value=0.097 Score=51.43 Aligned_cols=96 Identities=17% Similarity=0.109 Sum_probs=63.3
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP-- 257 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~-- 257 (357)
.+++++|+|+|++|.+++..+...|++|+++.++.++.+.+.+.++.. .+...+ .........|+++++++-...
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~--~~~~~~~~~diiINtT~vGm~~~ 454 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLAD--LENFHPEEGMILANTTSVGMQPN 454 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHhH--hhhhccccCeEEEecccCCCCCC
Confidence 467899999999999999999999999999999888877777656532 222211 111122357899988754411
Q ss_pred ---hHHHHhccccCCeEEEEccCC
Q 018382 258 ---LEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 258 ---~~~~~~~l~~~G~~v~~g~~~ 278 (357)
.......+++.+.++++-..+
T Consensus 455 ~~~~pl~~~~l~~~~~v~D~vY~P 478 (529)
T PLN02520 455 VDETPISKHALKHYSLVFDAVYTP 478 (529)
T ss_pred CCCCcccHhhCCCCCEEEEeccCC
Confidence 011234566777777664443
No 368
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.05 Score=48.98 Aligned_cols=76 Identities=20% Similarity=0.199 Sum_probs=50.5
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc---------HHHHHHHHh---cCCcE---EEcCCChhHHH---
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD---------KKRVEAMEH---LGADQ---YLVSSDATRMQ--- 239 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~---------~~~~~~~~~---~g~~~---vv~~~~~~~~~--- 239 (357)
-+++++||+|+ +++|.+.++.+...|++|++++++. ++.+.+.++ .|... .+|..+.+.++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 35789999987 9999999998888999999987654 433333222 24221 23555543333
Q ss_pred -Hhh---CCccEEEEcCCC
Q 018382 240 -EAA---DSLDYIIDTVPA 254 (357)
Q Consensus 240 -~~~---~~~d~v~d~~g~ 254 (357)
++. +.+|++++++|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 222 478999999875
No 369
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.81 E-value=0.047 Score=46.93 Aligned_cols=92 Identities=32% Similarity=0.372 Sum_probs=60.7
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcEEEcCCChhH--HHHhhCCccEEEE---
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQYLVSSDATR--MQEAADSLDYIID--- 250 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~--~~~~~~~~d~v~d--- 250 (357)
-+|.+||=.|+|+ |++..-+|+. |++|+.++-+++-.+.++.+ -|.. +|+..... +.+..+.||+|+.
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr~-Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmEV 133 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLARL-GASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCMEV 133 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHHC-CCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhhH
Confidence 3788999999853 5555555554 89999999998877766531 2322 45554322 2222247999874
Q ss_pred --cCCCCC-ChHHHHhccccCCeEEEE
Q 018382 251 --TVPANH-PLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 251 --~~g~~~-~~~~~~~~l~~~G~~v~~ 274 (357)
.+..+. .++.+.++++|+|.+..-
T Consensus 134 lEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 134 LEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred HHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 344432 456788999999998755
No 370
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.81 E-value=0.032 Score=50.91 Aligned_cols=87 Identities=18% Similarity=0.241 Sum_probs=62.3
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP-- 257 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~-- 257 (357)
.|++|.|+|.|.+|..+++.++.+|++|++..++.++.. +..... ....++++....|+|+.+......
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T~ 205 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPETV 205 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHHH
Confidence 578999999999999999999999999999887543211 222111 122355666788999988876422
Q ss_pred --h-HHHHhccccCCeEEEEc
Q 018382 258 --L-EPYLSLLKLDGKLILTG 275 (357)
Q Consensus 258 --~-~~~~~~l~~~G~~v~~g 275 (357)
+ ...++.|+++..++.++
T Consensus 206 ~li~~~~l~~mk~ga~lIN~a 226 (312)
T PRK15469 206 GIINQQLLEQLPDGAYLLNLA 226 (312)
T ss_pred HHhHHHHHhcCCCCcEEEECC
Confidence 2 24677899988888774
No 371
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=95.78 E-value=0.1 Score=46.61 Aligned_cols=75 Identities=16% Similarity=0.068 Sum_probs=54.6
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc--C--CcEEEcCCChhHHHHhhC---------C
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL--G--ADQYLVSSDATRMQEAAD---------S 244 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~--g--~~~vv~~~~~~~~~~~~~---------~ 244 (357)
-+++.|||+|+ +++|..++.-+...|.+|++.+-.++..+.++... + -+..+|..+++.+++... +
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 45677999998 99999999999999999999998887766665533 2 133456666555444321 6
Q ss_pred ccEEEEcCC
Q 018382 245 LDYIIDTVP 253 (357)
Q Consensus 245 ~d~v~d~~g 253 (357)
.=.++|++|
T Consensus 107 LwglVNNAG 115 (322)
T KOG1610|consen 107 LWGLVNNAG 115 (322)
T ss_pred ceeEEeccc
Confidence 667888887
No 372
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.063 Score=47.28 Aligned_cols=75 Identities=15% Similarity=0.181 Sum_probs=50.1
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHH---hcCCc---EEEcCCChhHHHHh----h---CC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAME---HLGAD---QYLVSSDATRMQEA----A---DS 244 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~---~~g~~---~vv~~~~~~~~~~~----~---~~ 244 (357)
+++++||+|+ +++|.++++.+...|++|+++.++++ ..+.+.+ ..+.. ...|..+++.+++. . +.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999987 99999999999989999999988653 2222222 13422 12355554433322 1 36
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++++++|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999885
No 373
>PLN03139 formate dehydrogenase; Provisional
Probab=95.77 E-value=0.058 Score=50.54 Aligned_cols=89 Identities=13% Similarity=0.163 Sum_probs=62.1
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC--
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP-- 257 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~-- 257 (357)
.|++|.|+|.|.+|..+++.++.+|++|++.+++....+...+ .|+... +.++++....|+|+.++.....
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~-~g~~~~------~~l~ell~~sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKE-TGAKFE------EDLDAMLPKCDVVVINTPLTEKTR 270 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhh-cCceec------CCHHHHHhhCCEEEEeCCCCHHHH
Confidence 5789999999999999999999999999998876433333333 554321 1234555668999877764321
Q ss_pred --h-HHHHhccccCCeEEEEc
Q 018382 258 --L-EPYLSLLKLDGKLILTG 275 (357)
Q Consensus 258 --~-~~~~~~l~~~G~~v~~g 275 (357)
+ ...++.|+++..+|.++
T Consensus 271 ~li~~~~l~~mk~ga~lIN~a 291 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNA 291 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECC
Confidence 1 34677888888777764
No 374
>PRK06823 ornithine cyclodeaminase; Validated
Probab=95.77 E-value=0.092 Score=47.95 Aligned_cols=100 Identities=19% Similarity=0.180 Sum_probs=67.8
Q ss_pred hccCCCCCCCeEEEEecChHHHHHHHHHHHc-CC-eEEEEeCCcHHHHHHHHhc---CCcEEEcCCChhHHHHhhCCccE
Q 018382 173 SHFGLKQSGLRGGILGLGGVGHMGVLIAKAM-GH-HVTVISSSDKKRVEAMEHL---GADQYLVSSDATRMQEAADSLDY 247 (357)
Q Consensus 173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~-g~-~V~~~~~~~~~~~~~~~~~---g~~~vv~~~~~~~~~~~~~~~d~ 247 (357)
+.+.+ +..+++.|+|+|..+...++.+... .. +|.+..++.++.+.+.+.+ +.+... . +..++...+.|+
T Consensus 121 ~~La~-~d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~-~---~~~~~av~~ADI 195 (315)
T PRK06823 121 RLLAP-QHVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNT-T---LDAAEVAHAANL 195 (315)
T ss_pred HHhcC-CCCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEE-E---CCHHHHhcCCCE
Confidence 44444 5567888999999998888777654 44 8999999999877555433 332221 1 223455679999
Q ss_pred EEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 248 IIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
|+.++++...+- -.+.++++-.+..+|...
T Consensus 196 V~taT~s~~P~~-~~~~l~~G~hi~~iGs~~ 225 (315)
T PRK06823 196 IVTTTPSREPLL-QAEDIQPGTHITAVGADS 225 (315)
T ss_pred EEEecCCCCcee-CHHHcCCCcEEEecCCCC
Confidence 998887763332 235678888888888654
No 375
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=95.76 E-value=0.076 Score=48.58 Aligned_cols=94 Identities=16% Similarity=0.143 Sum_probs=60.8
Q ss_pred eEEEEecChHHHHHHHHHHHcC----CeEEEEeC--CcHHHHHHHHhcCCc--------------E--------EEcCCC
Q 018382 183 RGGILGLGGVGHMGVLIAKAMG----HHVTVISS--SDKKRVEAMEHLGAD--------------Q--------YLVSSD 234 (357)
Q Consensus 183 ~VlI~G~g~~G~~ai~la~~~g----~~V~~~~~--~~~~~~~~~~~~g~~--------------~--------vv~~~~ 234 (357)
+|.|.|.|.+|..+++.+...+ .+|+.+.. +.+....+.+ +... - +...++
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~-yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLR-YDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHh-hCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999987653 56666643 2222333333 3210 1 111122
Q ss_pred hhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382 235 ATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 235 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
++.+.....++|+||+|+|.....+.+...++.|++.|.++.+
T Consensus 80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP 122 (325)
T TIGR01532 80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP 122 (325)
T ss_pred hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence 2223333348999999999986677888889988888888765
No 376
>PLN03075 nicotianamine synthase; Provisional
Probab=95.76 E-value=0.033 Score=49.94 Aligned_cols=96 Identities=11% Similarity=0.079 Sum_probs=64.3
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHc--CCeEEEEeCCcHHHHHHHHhcCC----cEEEcCCChhHHHHh--hCCccEEEE
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAM--GHHVTVISSSDKKRVEAMEHLGA----DQYLVSSDATRMQEA--ADSLDYIID 250 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~--g~~V~~~~~~~~~~~~~~~~~g~----~~vv~~~~~~~~~~~--~~~~d~v~d 250 (357)
.+.++|+-+|+|+.++.++-+++.. +.+++.++.+++..+.+++.+.. ..-+.....+..... .+.||+||-
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF~ 201 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVFL 201 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEEE
Confidence 3778999999999999888888655 34899999999888777774422 111111111121111 257999986
Q ss_pred cC------CC-CCChHHHHhccccCCeEEEE
Q 018382 251 TV------PA-NHPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 251 ~~------g~-~~~~~~~~~~l~~~G~~v~~ 274 (357)
.+ .. ...++...+.|+++|.++.=
T Consensus 202 ~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr 232 (296)
T PLN03075 202 AALVGMDKEEKVKVIEHLGKHMAPGALLMLR 232 (296)
T ss_pred ecccccccccHHHHHHHHHHhcCCCcEEEEe
Confidence 64 11 12467788899999998754
No 377
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.76 E-value=0.064 Score=46.61 Aligned_cols=75 Identities=19% Similarity=0.271 Sum_probs=51.6
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE-E--EcCCChhHHHHh-------hCCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ-Y--LVSSDATRMQEA-------ADSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~-v--v~~~~~~~~~~~-------~~~~ 245 (357)
+++++||+|+ |.+|..+++.+...|.+|+++.+++++.+..... .+... + .|..+++.+.+. ..++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999987 9999999999888899999999987765433221 33221 2 355554433222 1368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|.++.++|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999866
No 378
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.75 E-value=0.053 Score=47.81 Aligned_cols=74 Identities=11% Similarity=0.091 Sum_probs=50.3
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh----cCC--cE--EEcCCChhHHHH----hh---CC
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH----LGA--DQ--YLVSSDATRMQE----AA---DS 244 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~----~g~--~~--vv~~~~~~~~~~----~~---~~ 244 (357)
++++||+|+ |.+|.++++.+...|++|++++++..+.+.+.+. .+. .+ ..|..+.+.+.+ +. ++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999987 9999999999988899999999887655444322 231 11 225455443332 21 37
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|+++.++|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 379
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.062 Score=47.34 Aligned_cols=75 Identities=16% Similarity=0.118 Sum_probs=51.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH--hcCCc---EEEcCCChhHHHHhh-------CCcc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME--HLGAD---QYLVSSDATRMQEAA-------DSLD 246 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~--~~g~~---~vv~~~~~~~~~~~~-------~~~d 246 (357)
+++++||+|+ |++|..+++.+...|++|+++++++++.+...+ ..+.. ...|..+++.++... +++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 5679999987 999999998888889999999988766522222 12322 223555544333321 3789
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
++|.++|.
T Consensus 86 ~vi~~ag~ 93 (258)
T PRK08628 86 GLVNNAGV 93 (258)
T ss_pred EEEECCcc
Confidence 99999984
No 380
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.74 E-value=0.07 Score=49.20 Aligned_cols=87 Identities=29% Similarity=0.396 Sum_probs=62.4
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH--- 256 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~--- 256 (357)
.|++|.|+|.|.+|..+++.++..|++|++..++.... ...+ +|... ..+.++....|+|+-++....
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~-~~~~~-------~~l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE-AEKE-LGAEY-------RPLEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh-hHHH-cCCEe-------cCHHHHHhhCCEEEEeCCCChHHh
Confidence 57899999999999999999999999999988775432 2222 45321 123445557899988876532
Q ss_pred -Ch-HHHHhccccCCeEEEEc
Q 018382 257 -PL-EPYLSLLKLDGKLILTG 275 (357)
Q Consensus 257 -~~-~~~~~~l~~~G~~v~~g 275 (357)
.+ ...++.|+++..++.++
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~a 240 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTA 240 (333)
T ss_pred hccCHHHHhcCCCCeEEEECc
Confidence 22 35677888888888774
No 381
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.083 Score=47.15 Aligned_cols=75 Identities=15% Similarity=0.194 Sum_probs=50.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hCCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------ADSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~~~ 245 (357)
+.+++||+|+ |.+|.++++.+...|++|++++++.++.....+. .+... ..|..+.+.+.++ .+++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 3468999987 9999999998888899999999877655433321 34322 1355554433322 1368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++|.++|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999999876
No 382
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.74 E-value=0.039 Score=55.83 Aligned_cols=76 Identities=20% Similarity=0.191 Sum_probs=53.1
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH---------------------HHHHHHHhcCCcEEEcCCC--h
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK---------------------KRVEAMEHLGADQYLVSSD--A 235 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~---------------------~~~~~~~~~g~~~vv~~~~--~ 235 (357)
..+++|+|+|+|+.|++++..+...|.+|+++.+.+. +.+.+++ +|.+...+..- .
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSA-MGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHH-CCeEEECCCEeCCc
Confidence 3578999999999999999999999999999886532 2334444 78654333211 1
Q ss_pred hHHHHhhCCccEEEEcCCCC
Q 018382 236 TRMQEAADSLDYIIDTVPAN 255 (357)
Q Consensus 236 ~~~~~~~~~~d~v~d~~g~~ 255 (357)
-.++.+..++|.||.++|..
T Consensus 404 i~~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 404 ISLESLLEDYDAVFVGVGTY 423 (654)
T ss_pred CCHHHHHhcCCEEEEeCCCC
Confidence 11233445799999988864
No 383
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.063 Score=46.18 Aligned_cols=72 Identities=21% Similarity=0.174 Sum_probs=52.6
Q ss_pred CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHh----hC-CccEEEEcCCC
Q 018382 182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEA----AD-SLDYIIDTVPA 254 (357)
Q Consensus 182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~----~~-~~d~v~d~~g~ 254 (357)
++++|+|+ |++|..+++.+...|++|++++++.++.+.+.. .+.. ...|..+.+.++.+ .. ++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-LGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-ccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 46899986 999999998887889999999998777766655 5533 33555665444443 22 58999998775
No 384
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.071 Score=47.13 Aligned_cols=75 Identities=17% Similarity=0.189 Sum_probs=50.4
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH--hcCCc---EEEcCCChhHHHHh-------hCCcc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAME--HLGAD---QYLVSSDATRMQEA-------ADSLD 246 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~--~~g~~---~vv~~~~~~~~~~~-------~~~~d 246 (357)
+++++||+|+ |++|.++++.+...|++|+++.++++..+...+ ..+.. ...|..+.+.++++ .+.+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5688999987 999999999998889999999988653322222 12322 12355554433332 13689
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
++|.++|.
T Consensus 85 ~vi~~ag~ 92 (263)
T PRK08226 85 ILVNNAGV 92 (263)
T ss_pred EEEECCCc
Confidence 99998874
No 385
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.71 E-value=0.054 Score=48.02 Aligned_cols=75 Identities=17% Similarity=0.176 Sum_probs=49.9
Q ss_pred CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCC---cHHHHHHHHhcCCc--EEEcCCChhHHHHh----h---CC
Q 018382 180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSS---DKKRVEAMEHLGAD--QYLVSSDATRMQEA----A---DS 244 (357)
Q Consensus 180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~---~~~~~~~~~~~g~~--~vv~~~~~~~~~~~----~---~~ 244 (357)
+++++||+|+ +++|.++++.+...|++|+++.+. +++.+.+.++++.. ...|..+++.++++ . +.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 5788999983 589999998888899999987543 33444444445532 23455555433322 2 47
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++++++|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999998864
No 386
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.69 E-value=0.057 Score=47.78 Aligned_cols=74 Identities=19% Similarity=0.191 Sum_probs=48.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC-cHHHHHHH----HhcCCc---EEEcCCChhHHHHh----h---C
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS-DKKRVEAM----EHLGAD---QYLVSSDATRMQEA----A---D 243 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~-~~~~~~~~----~~~g~~---~vv~~~~~~~~~~~----~---~ 243 (357)
+++++||+|+ +++|.+++..+...|++|+++.++ +++.+.+. ...+.. ..+|..+++.++++ . +
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5789999987 999999999998899999887653 33333322 223422 12355555433322 2 3
Q ss_pred CccEEEEcCC
Q 018382 244 SLDYIIDTVP 253 (357)
Q Consensus 244 ~~d~v~d~~g 253 (357)
.+|++++++|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6899999885
No 387
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.69 E-value=0.077 Score=46.72 Aligned_cols=75 Identities=17% Similarity=0.073 Sum_probs=50.6
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh-cCCcEE-EcCCC-hhHHHHhh-CCccEEEEcCCC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH-LGADQY-LVSSD-ATRMQEAA-DSLDYIIDTVPA 254 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~-~g~~~v-v~~~~-~~~~~~~~-~~~d~v~d~~g~ 254 (357)
.+.+|||+|+ |.+|..+++.+...|.+|+++.++.++....... .+...+ .|..+ .+.+.+.. .++|+||.+.|.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~ 95 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF 95 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence 4678999997 9999999988888899999999887765433221 122211 34444 23333333 589999988765
No 388
>PRK09135 pteridine reductase; Provisional
Probab=95.68 E-value=0.067 Score=46.67 Aligned_cols=75 Identities=16% Similarity=0.094 Sum_probs=49.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHh---c-CC-c--EEEcCCChhHHHHhh-------C
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEH---L-GA-D--QYLVSSDATRMQEAA-------D 243 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~---~-g~-~--~vv~~~~~~~~~~~~-------~ 243 (357)
.++++||+|+ |.+|..+++.+...|++|++++++.. +.+.+... . +. . ...|..+.+.+..+. +
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999987 99999999988888999999987633 33322211 1 11 1 223555544333322 3
Q ss_pred CccEEEEcCCC
Q 018382 244 SLDYIIDTVPA 254 (357)
Q Consensus 244 ~~d~v~d~~g~ 254 (357)
.+|+||.++|.
T Consensus 85 ~~d~vi~~ag~ 95 (249)
T PRK09135 85 RLDALVNNASS 95 (249)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 389
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.67 E-value=0.081 Score=43.01 Aligned_cols=99 Identities=20% Similarity=0.303 Sum_probs=63.4
Q ss_pred ccccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh
Q 018382 157 QAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA 235 (357)
Q Consensus 157 ~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~ 235 (357)
+...+||.....+..|+..+.--.|++|+|+|. ..+|.-++.++...|+.|+...+...
T Consensus 12 ~~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~-------------------- 71 (160)
T PF02882_consen 12 QPGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTK-------------------- 71 (160)
T ss_dssp TTSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSS--------------------
T ss_pred CCCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCC--------------------
Confidence 345667776667777777665468999999996 68999999999999999998665421
Q ss_pred hHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 236 TRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 236 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
.+++.....|+|+.++|.+..+. .+.++++-.++++|...
T Consensus 72 -~l~~~~~~ADIVVsa~G~~~~i~--~~~ik~gavVIDvG~~~ 111 (160)
T PF02882_consen 72 -NLQEITRRADIVVSAVGKPNLIK--ADWIKPGAVVIDVGINY 111 (160)
T ss_dssp -SHHHHHTTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CEE
T ss_pred -cccceeeeccEEeeeeccccccc--cccccCCcEEEecCCcc
Confidence 12334457899999999874433 45788888888887643
No 390
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.055 Score=49.25 Aligned_cols=74 Identities=18% Similarity=0.173 Sum_probs=49.4
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc----------HHHHHHH---HhcCCc---EEEcCCChhHHHHh-
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD----------KKRVEAM---EHLGAD---QYLVSSDATRMQEA- 241 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~----------~~~~~~~---~~~g~~---~vv~~~~~~~~~~~- 241 (357)
.++++||+|+ +++|.++++.+...|++|++++++. ++.+.+. +..|.. ...|..+.+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4789999987 8999999999998999999998863 2332222 223422 12355554433322
Q ss_pred ---h---CCccEEEEcC-C
Q 018382 242 ---A---DSLDYIIDTV-P 253 (357)
Q Consensus 242 ---~---~~~d~v~d~~-g 253 (357)
. +.+|++++++ |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 1 3689999988 5
No 391
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.67 E-value=0.069 Score=46.83 Aligned_cols=74 Identities=18% Similarity=0.220 Sum_probs=51.1
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHH-------hhCCcc
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQE-------AADSLD 246 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~-------~~~~~d 246 (357)
++++||+|+ |.+|..++..+...|.+|++++++.++.+.+.+. .+.. ...|..+.+.++. ...++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 357999987 9999999998888899999999987766554432 2321 1235555543322 224689
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
++|.+.+.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99988865
No 392
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.063 Score=47.76 Aligned_cols=72 Identities=18% Similarity=0.230 Sum_probs=49.6
Q ss_pred eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh-------hCCccEE
Q 018382 183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA-------ADSLDYI 248 (357)
Q Consensus 183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~~~d~v 248 (357)
++||+|+ |++|..+++.+...|++|+++++++++.+.+.+. .+.+. ..|..+.+.+.++ .+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899987 9999999988888899999999987765544331 23222 2344444333322 1379999
Q ss_pred EEcCCC
Q 018382 249 IDTVPA 254 (357)
Q Consensus 249 ~d~~g~ 254 (357)
|.++|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999885
No 393
>PRK08264 short chain dehydrogenase; Validated
Probab=95.66 E-value=0.066 Score=46.52 Aligned_cols=71 Identities=20% Similarity=0.223 Sum_probs=51.5
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCc-E--EEcCCChhHHHHhh---CCccEEEEc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGAD-Q--YLVSSDATRMQEAA---DSLDYIIDT 251 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~---~~~d~v~d~ 251 (357)
.++++||+|+ |.+|..+++.+...|+ +|+++.++.++.+. .+.. . ..|..+.+.++++. ..+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 5678999987 9999999999999999 99999988665432 3321 1 23555555544443 268999999
Q ss_pred CCC
Q 018382 252 VPA 254 (357)
Q Consensus 252 ~g~ 254 (357)
+|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 887
No 394
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=95.66 E-value=0.061 Score=49.19 Aligned_cols=88 Identities=28% Similarity=0.310 Sum_probs=63.3
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCC-CC-
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPA-NH- 256 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~-~~- 256 (357)
-.|+++-|+|.|.+|.+.++.++..|++|+...++.. .+..+.+++.++ + +.++....|++.-.++. ++
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~----~---l~ell~~sDii~l~~Plt~~T 214 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYV----D---LDELLAESDIISLHCPLTPET 214 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceec----c---HHHHHHhCCEEEEeCCCChHH
Confidence 3589999999999999999999999999999998865 233332555443 1 45566678888654433 32
Q ss_pred --Ch-HHHHhccccCCeEEEEc
Q 018382 257 --PL-EPYLSLLKLDGKLILTG 275 (357)
Q Consensus 257 --~~-~~~~~~l~~~G~~v~~g 275 (357)
++ ...++.|++++.+|.++
T Consensus 215 ~hLin~~~l~~mk~ga~lVNta 236 (324)
T COG1052 215 RHLINAEELAKMKPGAILVNTA 236 (324)
T ss_pred hhhcCHHHHHhCCCCeEEEECC
Confidence 22 35778899999888774
No 395
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=95.66 E-value=0.14 Score=47.58 Aligned_cols=119 Identities=17% Similarity=0.233 Sum_probs=74.4
Q ss_pred CCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH-----------------
Q 018382 153 MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK----------------- 215 (357)
Q Consensus 153 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~----------------- 215 (357)
...++|....+.+++- .++...+.--.|.+|.|.|.|.+|..+++.+...|++|++++.+..
T Consensus 180 ~~r~~aTg~Gv~~~~~-~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~ 258 (411)
T COG0334 180 LGRSEATGYGVFYAIR-EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELK 258 (411)
T ss_pred CCCCcccceehHHHHH-HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHh
Confidence 3455666666665555 5555555413899999999999999999999988999999988776
Q ss_pred -HHHHHHHhcCCcEEEcCCC----------hhHHHH-hh-----C-CccEEEEcCCCCCChHHHHhccccCCeEEEE
Q 018382 216 -KRVEAMEHLGADQYLVSSD----------ATRMQE-AA-----D-SLDYIIDTVPANHPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 216 -~~~~~~~~~g~~~vv~~~~----------~~~~~~-~~-----~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 274 (357)
+...+.+.+|++.+- ... |-.+.+ ++ . ..++|.+.+..+ +...+.+.+...|.++.-
T Consensus 259 ~~~~~v~~~~ga~~i~-~~e~~~~~cDIl~PcA~~n~I~~~na~~l~ak~V~EgAN~P-~t~eA~~i~~erGIl~~P 333 (411)
T COG0334 259 ERRGSVAEYAGAEYIT-NEELLEVDCDILIPCALENVITEDNADQLKAKIVVEGANGP-TTPEADEILLERGILVVP 333 (411)
T ss_pred hhhhhHHhhcCceEcc-ccccccccCcEEcccccccccchhhHHHhhhcEEEeccCCC-CCHHHHHHHHHCCCEEcC
Confidence 444555544543321 110 000000 00 0 355677766666 556666666677766543
No 396
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.66 E-value=0.052 Score=48.05 Aligned_cols=75 Identities=19% Similarity=0.218 Sum_probs=48.3
Q ss_pred CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCc------HHHHHHHHhcCCc--EEEcCCChhHHHHh----h--
Q 018382 180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSD------KKRVEAMEHLGAD--QYLVSSDATRMQEA----A-- 242 (357)
Q Consensus 180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~------~~~~~~~~~~g~~--~vv~~~~~~~~~~~----~-- 242 (357)
.+++++|+|+ +++|.++++.+...|++|+++.++. +..+.+.+..+.. ..+|..+++.++++ .
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 5788999985 5899999999888999998875432 2233333322211 12455565443322 2
Q ss_pred -CCccEEEEcCCC
Q 018382 243 -DSLDYIIDTVPA 254 (357)
Q Consensus 243 -~~~d~v~d~~g~ 254 (357)
+.+|++++++|.
T Consensus 85 ~g~iD~lv~nag~ 97 (258)
T PRK07370 85 WGKLDILVHCLAF 97 (258)
T ss_pred cCCCCEEEEcccc
Confidence 379999999874
No 397
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=95.65 E-value=0.1 Score=46.68 Aligned_cols=94 Identities=15% Similarity=0.135 Sum_probs=57.8
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC---------cEEEcCCChhHHHHhhCCccEEE
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA---------DQYLVSSDATRMQEAADSLDYII 249 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~---------~~vv~~~~~~~~~~~~~~~d~v~ 249 (357)
..++||++|+|. |..+..+++.... +++++..+++-.+.+++.+.. -.++..+..+++++..+.+|+|+
T Consensus 72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDvIi 150 (270)
T TIGR00417 72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDVII 150 (270)
T ss_pred CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccEEE
Confidence 345999998754 4445566666544 888888887766666664421 11222222234444456899997
Q ss_pred EcCCC----------CCChHHHHhccccCCeEEEE
Q 018382 250 DTVPA----------NHPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 250 d~~g~----------~~~~~~~~~~l~~~G~~v~~ 274 (357)
--... .+.++.+.+.|+++|.++..
T Consensus 151 ~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~ 185 (270)
T TIGR00417 151 VDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQ 185 (270)
T ss_pred EeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEc
Confidence 43321 11245788899999999876
No 398
>PRK06398 aldose dehydrogenase; Validated
Probab=95.65 E-value=0.039 Score=48.81 Aligned_cols=69 Identities=13% Similarity=0.108 Sum_probs=49.0
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-cEEEcCCChhHHHHhh-------CCccEEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-DQYLVSSDATRMQEAA-------DSLDYIID 250 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~-------~~~d~v~d 250 (357)
.++++||+|+ +++|.+++..+...|++|+++.+++.+.. .. ....|..+++.++++. +.+|++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN------DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC------ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999987 99999999999999999999988754321 11 1224555554433321 36999999
Q ss_pred cCCC
Q 018382 251 TVPA 254 (357)
Q Consensus 251 ~~g~ 254 (357)
++|.
T Consensus 79 ~Ag~ 82 (258)
T PRK06398 79 NAGI 82 (258)
T ss_pred CCCC
Confidence 8874
No 399
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.63 E-value=0.067 Score=49.27 Aligned_cols=90 Identities=18% Similarity=0.207 Sum_probs=64.4
Q ss_pred CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-----------EEEcCCChhHHHHhhCCccEEEE
Q 018382 182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-----------QYLVSSDATRMQEAADSLDYIID 250 (357)
Q Consensus 182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-----------~vv~~~~~~~~~~~~~~~d~v~d 250 (357)
-+|.|+|+|.+|.+++..+...|.+|++..+++++.+.+.+ .+.+ .+.... ...+.....|+||-
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~-~~~~~~~~~g~~~~~~~~~~~---~~~e~~~~aD~Vi~ 80 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAA-ERENREYLPGVALPAELYPTA---DPEEALAGADFAVV 80 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-hCcccccCCCCcCCCCeEEeC---CHHHHHcCCCEEEE
Confidence 46899999999999999998889999999998777766665 3211 011111 12233457899999
Q ss_pred cCCCCCChHHHHhccccCCeEEEEcc
Q 018382 251 TVPANHPLEPYLSLLKLDGKLILTGV 276 (357)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~g~ 276 (357)
++... .++..++.++++-.++.+..
T Consensus 81 ~v~~~-~~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 81 AVPSK-ALRETLAGLPRALGYVSCAK 105 (328)
T ss_pred ECchH-HHHHHHHhcCcCCEEEEEee
Confidence 99988 67777788887766665543
No 400
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.62 E-value=0.062 Score=46.83 Aligned_cols=75 Identities=17% Similarity=0.302 Sum_probs=50.1
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEE-eCCcHHHHHHHHhc---CCc-E--EEcCCChhHHHHhh-------CCc
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVI-SSSDKKRVEAMEHL---GAD-Q--YLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~-~~~~~~~~~~~~~~---g~~-~--vv~~~~~~~~~~~~-------~~~ 245 (357)
++++||+|+ |.+|..++..+...|++|+++ .++.++...+.+.+ +.. . ..|..+.+.+.+.. +++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 468999987 999999998888889999998 87766554433322 221 1 23555544333322 279
Q ss_pred cEEEEcCCCC
Q 018382 246 DYIIDTVPAN 255 (357)
Q Consensus 246 d~v~d~~g~~ 255 (357)
|++|.++|..
T Consensus 85 d~vi~~ag~~ 94 (247)
T PRK05565 85 DILVNNAGIS 94 (247)
T ss_pred CEEEECCCcC
Confidence 9999988753
No 401
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.61 E-value=0.099 Score=46.63 Aligned_cols=96 Identities=16% Similarity=0.218 Sum_probs=72.2
Q ss_pred ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382 159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR 237 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~ 237 (357)
+..||.....+..|+....--.|++|+|+|- ..+|.-++.++...|+.|++..+... .
T Consensus 142 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~---------------------~ 200 (287)
T PRK14176 142 GLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD---------------------D 200 (287)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC---------------------C
Confidence 4567776667777776665358999999997 56999999999999999988664211 1
Q ss_pred HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382 238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
+++....+|+++.++|.+..+ -.+.++++-.++++|..
T Consensus 201 l~~~~~~ADIvv~AvG~p~~i--~~~~vk~gavVIDvGin 238 (287)
T PRK14176 201 LKKYTLDADILVVATGVKHLI--KADMVKEGAVIFDVGIT 238 (287)
T ss_pred HHHHHhhCCEEEEccCCcccc--CHHHcCCCcEEEEeccc
Confidence 234456789999999998544 45688999999999874
No 402
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.57 E-value=0.083 Score=46.49 Aligned_cols=74 Identities=15% Similarity=0.159 Sum_probs=48.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH--HHHHHHhcCCc-E--EEcCCChhHHHH----hh---CCcc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK--RVEAMEHLGAD-Q--YLVSSDATRMQE----AA---DSLD 246 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~--~~~~~~~~g~~-~--vv~~~~~~~~~~----~~---~~~d 246 (357)
.++++||+|+ |++|.++++.+...|++|+.+.+.+.+ .+.+.+ .+.. + ..|..+.+.+++ +. +.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTA-LGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999987 999999999999999999987655432 223333 4422 1 234444433332 21 3699
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
++++++|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999875
No 403
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.57 E-value=0.072 Score=46.60 Aligned_cols=75 Identities=16% Similarity=0.191 Sum_probs=52.1
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc-E--EEcCCChhHHHHh----h---CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD-Q--YLVSSDATRMQEA----A---DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--vv~~~~~~~~~~~----~---~~~ 245 (357)
+++++||+|+ |.+|..+++.+...|++|++++++.++...+.+. .+.. . ..|..+.+.+++. . .++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 9999999999988999999999887766554332 2321 1 2344454433332 1 368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++|.++|.
T Consensus 82 d~vi~~ag~ 90 (250)
T TIGR03206 82 DVLVNNAGW 90 (250)
T ss_pred CEEEECCCC
Confidence 999999874
No 404
>PRK07069 short chain dehydrogenase; Validated
Probab=95.55 E-value=0.075 Score=46.51 Aligned_cols=72 Identities=17% Similarity=0.184 Sum_probs=48.9
Q ss_pred eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC-cHHHHHHHHhc----CCc----EEEcCCChhHHHHh-------hCCc
Q 018382 183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSS-DKKRVEAMEHL----GAD----QYLVSSDATRMQEA-------ADSL 245 (357)
Q Consensus 183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~-~~~~~~~~~~~----g~~----~vv~~~~~~~~~~~-------~~~~ 245 (357)
++||+|+ |++|..+++.+...|++|+++.++ .++.+.+.+.+ +.. ...|..+.+.+.++ .+++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 3789986 999999999998889999999987 55554444323 211 12355554443332 2368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|+++.++|.
T Consensus 81 d~vi~~ag~ 89 (251)
T PRK07069 81 SVLVNNAGV 89 (251)
T ss_pred cEEEECCCc
Confidence 999999875
No 405
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=95.54 E-value=0.048 Score=48.76 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=50.4
Q ss_pred EEEEec-ChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC----C---c-E----EEcCCChhHHHHhhC--CccE
Q 018382 184 GGILGL-GGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG----A---D-Q----YLVSSDATRMQEAAD--SLDY 247 (357)
Q Consensus 184 VlI~G~-g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g----~---~-~----vv~~~~~~~~~~~~~--~~d~ 247 (357)
|||+|+ |.+|..+++-+...+. ++++++++|.+...+.+++. . . . +-|.++.+.+.++.. ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 799986 9999988888877786 89999999999888877772 1 1 1 226667777888776 9999
Q ss_pred EEEcCCCC
Q 018382 248 IIDTVPAN 255 (357)
Q Consensus 248 v~d~~g~~ 255 (357)
||.++.-+
T Consensus 81 VfHaAA~K 88 (293)
T PF02719_consen 81 VFHAAALK 88 (293)
T ss_dssp EEE-----
T ss_pred EEEChhcC
Confidence 99988665
No 406
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.53 E-value=0.097 Score=43.08 Aligned_cols=91 Identities=25% Similarity=0.274 Sum_probs=61.5
Q ss_pred eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE--cCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382 183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL--VSSDATRMQEAADSLDYIIDTVPANH--- 256 (357)
Q Consensus 183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv--~~~~~~~~~~~~~~~d~v~d~~g~~~--- 256 (357)
++.|+|+ |-+|...++=|+..|-+|++++|++++....+. ..++ |.-+.+.+.....++|+||++.+...
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~----~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQG----VTILQKDIFDLTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccccc----ceeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence 5788887 999999999999999999999999888654311 1111 12233444556679999999887651
Q ss_pred ------ChHHHHhccccCC--eEEEEccC
Q 018382 257 ------PLEPYLSLLKLDG--KLILTGVI 277 (357)
Q Consensus 257 ------~~~~~~~~l~~~G--~~v~~g~~ 277 (357)
..+.++..|+.-| ++..+|..
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 1122555666644 66666654
No 407
>PLN02686 cinnamoyl-CoA reductase
Probab=95.53 E-value=0.076 Score=49.71 Aligned_cols=75 Identities=15% Similarity=0.057 Sum_probs=51.6
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh--c--------CCcE-EEcCCChhHHHHhhCCcc
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH--L--------GADQ-YLVSSDATRMQEAADSLD 246 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~--~--------g~~~-vv~~~~~~~~~~~~~~~d 246 (357)
..+++|||+|+ |.+|..+++.+...|++|+++.++.++.+.+.+. + +... ..|..+.+.+.+...++|
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~d 130 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGCA 130 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhcc
Confidence 45789999987 9999999999998999999888776554443321 1 1111 135556666666666788
Q ss_pred EEEEcCC
Q 018382 247 YIIDTVP 253 (357)
Q Consensus 247 ~v~d~~g 253 (357)
.||.+.+
T Consensus 131 ~V~hlA~ 137 (367)
T PLN02686 131 GVFHTSA 137 (367)
T ss_pred EEEecCe
Confidence 8886543
No 408
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.53 E-value=0.077 Score=46.43 Aligned_cols=76 Identities=14% Similarity=0.157 Sum_probs=50.4
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc--EE--EcCC--ChhHH----HHh---
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD--QY--LVSS--DATRM----QEA--- 241 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~v--v~~~--~~~~~----~~~--- 241 (357)
.+++++||+|+ |.+|..+++.+...|++|++++++.++.+.+.+. .+.. .+ .|.. +.+.+ ..+
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ 89 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence 57889999987 9999999988888899999999987665443322 2321 12 2332 22221 112
Q ss_pred hCCccEEEEcCCC
Q 018382 242 ADSLDYIIDTVPA 254 (357)
Q Consensus 242 ~~~~d~v~d~~g~ 254 (357)
.+.+|+++.+++.
T Consensus 90 ~~~id~vi~~Ag~ 102 (247)
T PRK08945 90 FGRLDGVLHNAGL 102 (247)
T ss_pred hCCCCEEEECCcc
Confidence 2368999998864
No 409
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.52 E-value=0.093 Score=44.02 Aligned_cols=96 Identities=25% Similarity=0.279 Sum_probs=58.6
Q ss_pred CCCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHH---hcCCcE--EEcCCChhHHHHhhCCccEEEEc
Q 018382 178 KQSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAME---HLGADQ--YLVSSDATRMQEAADSLDYIIDT 251 (357)
Q Consensus 178 ~~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~--vv~~~~~~~~~~~~~~~d~v~d~ 251 (357)
+.++.+||-+|+|. |..++.+++.. +.+|+.++.+++..+.+++ +.+.+. ++..+-.+ ... .+.+|+|+-.
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~-~~~-~~~fDlV~~~ 119 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEE-FGQ-EEKFDVVTSR 119 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhh-CCC-CCCccEEEEc
Confidence 35688999998742 44455555433 5699999999876654443 244432 22211111 111 3479999864
Q ss_pred CCC--CCChHHHHhccccCCeEEEEcc
Q 018382 252 VPA--NHPLEPYLSLLKLDGKLILTGV 276 (357)
Q Consensus 252 ~g~--~~~~~~~~~~l~~~G~~v~~g~ 276 (357)
... ...++.+.+.|+++|+++.+-.
T Consensus 120 ~~~~~~~~l~~~~~~LkpGG~lv~~~~ 146 (187)
T PRK00107 120 AVASLSDLVELCLPLLKPGGRFLALKG 146 (187)
T ss_pred cccCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 322 1245678889999999987743
No 410
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.054 Score=47.60 Aligned_cols=70 Identities=19% Similarity=0.161 Sum_probs=49.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC--Cc-EEEcCCChhHHHHhh-------CCccEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG--AD-QYLVSSDATRMQEAA-------DSLDYI 248 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g--~~-~vv~~~~~~~~~~~~-------~~~d~v 248 (357)
.++++||+|+ |++|.++++.+...|++|+++++++++ .. .+ .. ...|..+.+.+++.. +.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TV-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999987 999999999998899999999987654 11 22 21 224555544333321 368999
Q ss_pred EEcCCC
Q 018382 249 IDTVPA 254 (357)
Q Consensus 249 ~d~~g~ 254 (357)
|.++|.
T Consensus 80 i~~ag~ 85 (252)
T PRK07856 80 VNNAGG 85 (252)
T ss_pred EECCCC
Confidence 999874
No 411
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=95.51 E-value=0.1 Score=47.50 Aligned_cols=37 Identities=24% Similarity=0.211 Sum_probs=30.9
Q ss_pred CCCeEEEEec---ChHHHHHHHHHHHcCCeEEEEeCCcHHH
Q 018382 180 SGLRGGILGL---GGVGHMGVLIAKAMGHHVTVISSSDKKR 217 (357)
Q Consensus 180 ~~~~VlI~G~---g~~G~~ai~la~~~g~~V~~~~~~~~~~ 217 (357)
.|+++||+|+ .++|.++++.+...|++|++ .+..+++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l 47 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL 47 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence 5889999987 89999999999999999988 5554443
No 412
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.51 E-value=0.07 Score=46.69 Aligned_cols=75 Identities=24% Similarity=0.311 Sum_probs=49.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEE-eCCcHHHHHHHHh---cCCcE---EEcCCChhHHHHh----h---CC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVI-SSSDKKRVEAMEH---LGADQ---YLVSSDATRMQEA----A---DS 244 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~----~---~~ 244 (357)
+++++||+|+ |.+|..+++.+...|++|++. .++.++.+.+.+. .+... ..|..+++.+... . ++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 999999999999999998764 5665554333221 34321 2355554433322 1 36
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++|.++|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999998875
No 413
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.49 E-value=0.083 Score=43.24 Aligned_cols=88 Identities=30% Similarity=0.328 Sum_probs=58.3
Q ss_pred eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCChHHH-
Q 018382 183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPY- 261 (357)
Q Consensus 183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~- 261 (357)
+|-++|.|.+|..+++-+...|.+|++..++.++.+.+.+ .|+... + + ..+.....|+||-|+.+....+..
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-~g~~~~-~--s---~~e~~~~~dvvi~~v~~~~~v~~v~ 75 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE-AGAEVA-D--S---PAEAAEQADVVILCVPDDDAVEAVL 75 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH-TTEEEE-S--S---HHHHHHHBSEEEE-SSSHHHHHHHH
T ss_pred EEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH-hhhhhh-h--h---hhhHhhcccceEeecccchhhhhhh
Confidence 6788999999999999999999999999999999888888 564322 1 1 223334569999988875344443
Q ss_pred -----HhccccCCeEEEEccC
Q 018382 262 -----LSLLKLDGKLILTGVI 277 (357)
Q Consensus 262 -----~~~l~~~G~~v~~g~~ 277 (357)
+..++++..++..+..
T Consensus 76 ~~~~i~~~l~~g~iiid~sT~ 96 (163)
T PF03446_consen 76 FGENILAGLRPGKIIIDMSTI 96 (163)
T ss_dssp HCTTHGGGS-TTEEEEE-SS-
T ss_pred hhhHHhhccccceEEEecCCc
Confidence 3445566666666443
No 414
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.49 E-value=0.081 Score=49.71 Aligned_cols=76 Identities=18% Similarity=0.238 Sum_probs=50.4
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCC-------------------cHHHHHHHHhc----CCcEEEcCC--
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSS-------------------DKKRVEAMEHL----GADQYLVSS-- 233 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~-------------------~~~~~~~~~~~----g~~~vv~~~-- 233 (357)
.+.+|+|+|+|++|..++..+...|+ ++++++.. ..|.+.+.+++ +...+....
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 213 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER 213 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 46789999999999999999999999 78887765 23333333323 222221111
Q ss_pred -ChhHHHHhhCCccEEEEcCCCC
Q 018382 234 -DATRMQEAADSLDYIIDTVPAN 255 (357)
Q Consensus 234 -~~~~~~~~~~~~d~v~d~~g~~ 255 (357)
+.+.+.++..++|+|++|+.+.
T Consensus 214 ~~~~~~~~~~~~~D~Vv~~~d~~ 236 (376)
T PRK08762 214 VTSDNVEALLQDVDVVVDGADNF 236 (376)
T ss_pred CChHHHHHHHhCCCEEEECCCCH
Confidence 1223444556899999999886
No 415
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.47 E-value=0.16 Score=45.24 Aligned_cols=96 Identities=15% Similarity=0.209 Sum_probs=71.8
Q ss_pred ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382 159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR 237 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~ 237 (357)
..+||.....+..|+..+.--.|++|+|+|- ..+|..++.++...|++|++..+... .
T Consensus 130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~---------------------~ 188 (279)
T PRK14178 130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTE---------------------N 188 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChh---------------------H
Confidence 4567776666767776665458999999997 59999999999999999998775421 2
Q ss_pred HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382 238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
+++....+|+|+.++|.+..+. .+.++++..++++|..
T Consensus 189 L~~~~~~ADIvI~Avgk~~lv~--~~~vk~GavVIDVgi~ 226 (279)
T PRK14178 189 LKAELRQADILVSAAGKAGFIT--PDMVKPGATVIDVGIN 226 (279)
T ss_pred HHHHHhhCCEEEECCCcccccC--HHHcCCCcEEEEeecc
Confidence 3344457899999998764443 3447999999999865
No 416
>PRK01581 speE spermidine synthase; Validated
Probab=95.47 E-value=0.23 Score=45.92 Aligned_cols=95 Identities=19% Similarity=0.123 Sum_probs=60.5
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcC-----------C--cEEEcCCChhHHHHhhCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLG-----------A--DQYLVSSDATRMQEAADS 244 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g-----------~--~~vv~~~~~~~~~~~~~~ 244 (357)
...++|||+|+| .|.++..+++..+. +|+++..+++-.+.+++ +. . -.++..+..++++...+.
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~-~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~ 226 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARN-VPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSL 226 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh-ccccchhccccCCCCceEEEECcHHHHHHhcCCC
Confidence 344689999865 46667777776654 89999988877776665 21 0 112222223445554558
Q ss_pred ccEEEEcCCCC-----------CChHHHHhccccCCeEEEEc
Q 018382 245 LDYIIDTVPAN-----------HPLEPYLSLLKLDGKLILTG 275 (357)
Q Consensus 245 ~d~v~d~~g~~-----------~~~~~~~~~l~~~G~~v~~g 275 (357)
+|+||--...+ +.++.+.+.|+++|.++...
T Consensus 227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 99997443221 13567888999999987764
No 417
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.076 Score=47.40 Aligned_cols=75 Identities=21% Similarity=0.227 Sum_probs=50.2
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-------HHHHH---HhcCCcE---EEcCCChhHHHHhh---
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-------RVEAM---EHLGADQ---YLVSSDATRMQEAA--- 242 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-------~~~~~---~~~g~~~---vv~~~~~~~~~~~~--- 242 (357)
+++++||+|+ |++|..+++.+...|++|++++++.+. .+... +..+.+. ..|..+.+.+.++.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4678999987 999999999888889999999986542 11111 1134321 24555554433321
Q ss_pred ----CCccEEEEcCCC
Q 018382 243 ----DSLDYIIDTVPA 254 (357)
Q Consensus 243 ----~~~d~v~d~~g~ 254 (357)
+.+|++|+++|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 379999999875
No 418
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.44 E-value=0.091 Score=49.63 Aligned_cols=76 Identities=16% Similarity=0.243 Sum_probs=52.9
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHH------HHHHhc-CCcE-EEcCCChhHHHHhhC----Cc
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRV------EAMEHL-GADQ-YLVSSDATRMQEAAD----SL 245 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~------~~~~~~-g~~~-vv~~~~~~~~~~~~~----~~ 245 (357)
..+.+|||+|+ |.+|..+++.+...|.+|++++++..+.. ...+.. +... ..|..+++.+.+... ++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 45778999987 99999999999888999999998765421 111112 2222 246666665555433 69
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|+||+|++.
T Consensus 138 D~Vi~~aa~ 146 (390)
T PLN02657 138 DVVVSCLAS 146 (390)
T ss_pred cEEEECCcc
Confidence 999999874
No 419
>PRK05599 hypothetical protein; Provisional
Probab=95.42 E-value=0.083 Score=46.34 Aligned_cols=71 Identities=15% Similarity=0.125 Sum_probs=48.7
Q ss_pred eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc--E--EEcCCChhHHHH----h---hCCccE
Q 018382 183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD--Q--YLVSSDATRMQE----A---ADSLDY 247 (357)
Q Consensus 183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~--~--vv~~~~~~~~~~----~---~~~~d~ 247 (357)
++||+|+ +++|.+.++.+. .|.+|+++.+++++.+.+.+++ |.+ + .+|..+.+.+++ + .+++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 6899987 999999888776 4999999999888776554322 322 1 235555443332 2 247999
Q ss_pred EEEcCCC
Q 018382 248 IIDTVPA 254 (357)
Q Consensus 248 v~d~~g~ 254 (357)
+++++|.
T Consensus 81 lv~nag~ 87 (246)
T PRK05599 81 AVVAFGI 87 (246)
T ss_pred EEEecCc
Confidence 9998875
No 420
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=95.40 E-value=0.088 Score=45.74 Aligned_cols=73 Identities=12% Similarity=0.080 Sum_probs=47.2
Q ss_pred CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHHhc---CC---cEEEcCCChhHHHH----h---hCCcc
Q 018382 182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAMEHL---GA---DQYLVSSDATRMQE----A---ADSLD 246 (357)
Q Consensus 182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~~~---g~---~~vv~~~~~~~~~~----~---~~~~d 246 (357)
+++||+|+ |++|..+++.+...|++|+++.+ ++++.+...+.. +. -...|..+++.+.+ + .+.+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 46899987 99999999999989999998887 444333322212 21 11235555433322 2 23689
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
+||.++|.
T Consensus 81 ~vi~~ag~ 88 (242)
T TIGR01829 81 VLVNNAGI 88 (242)
T ss_pred EEEECCCC
Confidence 99999875
No 421
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.40 E-value=0.084 Score=46.33 Aligned_cols=73 Identities=18% Similarity=0.163 Sum_probs=50.2
Q ss_pred CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHh-------hCCccE
Q 018382 182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEA-------ADSLDY 247 (357)
Q Consensus 182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~~~d~ 247 (357)
++++|+|+ |++|..+++.+...|++|+++.+++++.+.+.+. .+.. ...|..+++.+.++ .+.+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 36899987 9999999999988999999999887655443321 3422 12355555443332 136899
Q ss_pred EEEcCCC
Q 018382 248 IIDTVPA 254 (357)
Q Consensus 248 v~d~~g~ 254 (357)
++.++|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9998875
No 422
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.39 E-value=0.19 Score=43.66 Aligned_cols=99 Identities=23% Similarity=0.311 Sum_probs=68.3
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCC---cEE-EcCCChhHHHHhhCCccEEEEcCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGA---DQY-LVSSDATRMQEAADSLDYIIDTVP 253 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~---~~v-v~~~~~~~~~~~~~~~d~v~d~~g 253 (357)
.+|++||=+|+| +|-.++.+++..|- +|++++.+++-++.++++... ..+ +...+.+.+.--.+.||+|.-+.|
T Consensus 50 ~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt~~fg 128 (238)
T COG2226 50 KPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVTISFG 128 (238)
T ss_pred CCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEEEeeeh
Confidence 589999998764 48888899988875 999999999988887775542 111 112222222212247888875544
Q ss_pred C------CCChHHHHhccccCCeEEEEccCC
Q 018382 254 A------NHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 254 ~------~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
- ...+++..|.|+|+|+++.+....
T Consensus 129 lrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 129 LRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred hhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 3 125778999999999998887654
No 423
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.38 E-value=0.074 Score=49.08 Aligned_cols=75 Identities=17% Similarity=0.247 Sum_probs=49.4
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc---------------------HHH----HHHHHhcCCc-EE--E
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD---------------------KKR----VEAMEHLGAD-QY--L 230 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~---------------------~~~----~~~~~~~g~~-~v--v 230 (357)
.+.+|+|+|+|++|..++..+...|. ++++++... .|. +.+++ +..+ .+ +
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~-inp~v~i~~~ 101 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRK-INSEVEIVPV 101 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHH-HCCCcEEEEE
Confidence 45789999999999999999999998 777777642 122 22223 3221 11 1
Q ss_pred cCC-ChhHHHHhhCCccEEEEcCCCC
Q 018382 231 VSS-DATRMQEAADSLDYIIDTVPAN 255 (357)
Q Consensus 231 ~~~-~~~~~~~~~~~~d~v~d~~g~~ 255 (357)
... +.+.++++..++|+|+|++.+.
T Consensus 102 ~~~~~~~~~~~~~~~~DlVid~~D~~ 127 (338)
T PRK12475 102 VTDVTVEELEELVKEVDLIIDATDNF 127 (338)
T ss_pred eccCCHHHHHHHhcCCCEEEEcCCCH
Confidence 111 2234555667899999999876
No 424
>PRK12743 oxidoreductase; Provisional
Probab=95.38 E-value=0.13 Score=45.33 Aligned_cols=74 Identities=19% Similarity=0.240 Sum_probs=48.5
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc-HHHHHHHH---hcCCc-E--EEcCCChhHHHH----hh---CCc
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD-KKRVEAME---HLGAD-Q--YLVSSDATRMQE----AA---DSL 245 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~-~~~~~~~~---~~g~~-~--vv~~~~~~~~~~----~~---~~~ 245 (357)
++++||+|+ |++|..+++.+...|++|+++.+++ ++.+.+.+ ..|.. + ..|..+.+.+++ +. +++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999987 9999999999999999998876543 33322222 24532 2 245555443322 22 368
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++|.++|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999998875
No 425
>PRK09134 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.13 Score=45.34 Aligned_cols=75 Identities=13% Similarity=0.136 Sum_probs=48.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC-cHHHHHHHHh---cCCc---EEEcCCChhHHHHh-------hCC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS-DKKRVEAMEH---LGAD---QYLVSSDATRMQEA-------ADS 244 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~-~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~~ 244 (357)
.++++||+|+ |++|..+++.+...|++|+++.+. .++.+.+.++ .+.. ...|..+.+.+.+. .++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 999999999888889999887654 3333333221 2332 12355554433322 236
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|++|.++|.
T Consensus 88 iD~vi~~ag~ 97 (258)
T PRK09134 88 ITLLVNNASL 97 (258)
T ss_pred CCEEEECCcC
Confidence 8999999874
No 426
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.36 E-value=0.12 Score=49.91 Aligned_cols=71 Identities=18% Similarity=0.251 Sum_probs=49.6
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH-HH----HHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK-KR----VEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPA 254 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~-~~----~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~ 254 (357)
.+++|+|+|+|.+|+.++..+...|++|+++++.+. .. +++.+ .|... +..+..+ +..+++|+|+.++|.
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-~~~~~-~~~~~~~---~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-LGIEL-VLGEYPE---EFLEGVDLVVVSPGV 78 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-cCCEE-EeCCcch---hHhhcCCEEEECCCC
Confidence 468899999988999999999999999999998752 22 22222 46442 2222122 334579999998886
Q ss_pred C
Q 018382 255 N 255 (357)
Q Consensus 255 ~ 255 (357)
.
T Consensus 79 ~ 79 (450)
T PRK14106 79 P 79 (450)
T ss_pred C
Confidence 4
No 427
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.35 E-value=0.35 Score=42.24 Aligned_cols=97 Identities=11% Similarity=0.078 Sum_probs=59.8
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCc-HHHH----HHHHhcCCc-E--EEcCCChhHHHH----h---hC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSD-KKRV----EAMEHLGAD-Q--YLVSSDATRMQE----A---AD 243 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~-~~~~----~~~~~~g~~-~--vv~~~~~~~~~~----~---~~ 243 (357)
.++++||+|+ |.+|...++-+...|++|+++.++. ++.. .+.+ .+.. . ..|..+.+.+.. + ..
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 3578999987 9999999988888999988776543 2222 1222 3322 1 235555433222 2 23
Q ss_pred CccEEEEcCCCCC-------------------------ChHHHHhccccCCeEEEEccC
Q 018382 244 SLDYIIDTVPANH-------------------------PLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 244 ~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 277 (357)
++|++|.++|... ..+.+.+.++..|+++.++..
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~ 142 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV 142 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence 7899999998410 022334455677889888764
No 428
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.34 E-value=0.11 Score=44.59 Aligned_cols=73 Identities=15% Similarity=0.144 Sum_probs=51.2
Q ss_pred CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE--EEcCCChhHHHHhhC---CccEEEEcCCCC
Q 018382 182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ--YLVSSDATRMQEAAD---SLDYIIDTVPAN 255 (357)
Q Consensus 182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~---~~d~v~d~~g~~ 255 (357)
+++||+|+ |.+|..++..+... .+|+++.++.++.+.+.+.....+ ..|..+.+.+++... ++|++|.++|..
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~ 82 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVA 82 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence 57999987 99999988877666 999999998777665554332222 235555555554443 699999998753
No 429
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.34 E-value=0.13 Score=50.08 Aligned_cols=71 Identities=25% Similarity=0.293 Sum_probs=49.3
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHH-----HHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKK-----RVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVP 253 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~-----~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g 253 (357)
..+++|+|+|+|.+|+.++..++..|.+|++++..+.. .+.+++ .|......... . ....+|.|+-+.|
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~-~gv~~~~~~~~-~----~~~~~D~Vv~s~G 87 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA-LGATVRLGPGP-T----LPEDTDLVVTSPG 87 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH-cCCEEEECCCc-c----ccCCCCEEEECCC
Confidence 35678999999999999999999999999998865431 123333 67654433221 1 2346888888777
Q ss_pred CC
Q 018382 254 AN 255 (357)
Q Consensus 254 ~~ 255 (357)
-.
T Consensus 88 i~ 89 (480)
T PRK01438 88 WR 89 (480)
T ss_pred cC
Confidence 64
No 430
>PLN02650 dihydroflavonol-4-reductase
Probab=95.34 E-value=0.097 Score=48.58 Aligned_cols=75 Identities=12% Similarity=0.005 Sum_probs=51.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCC---cE--EEcCCChhHHHHhhCCccEEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGA---DQ--YLVSSDATRMQEAADSLDYIID 250 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~---~~--vv~~~~~~~~~~~~~~~d~v~d 250 (357)
..++|||+|+ |.+|..++..+...|.+|++++++.++....... .+. -. ..|..+.+.+.++..++|+||.
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 4578999987 9999999999988899999988876544332221 121 11 1244455556666668999999
Q ss_pred cCCC
Q 018382 251 TVPA 254 (357)
Q Consensus 251 ~~g~ 254 (357)
+++.
T Consensus 84 ~A~~ 87 (351)
T PLN02650 84 VATP 87 (351)
T ss_pred eCCC
Confidence 8753
No 431
>PRK10637 cysG siroheme synthase; Provisional
Probab=95.33 E-value=0.076 Score=51.24 Aligned_cols=116 Identities=10% Similarity=-0.014 Sum_probs=71.7
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCCh
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPL 258 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (357)
.+++|||+|+|.++.-=++.+...|++|++++..-. +...+.+ .|.-..+. + ++......++++||-++++...-
T Consensus 11 ~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~-~~~i~~~~-~--~~~~~dl~~~~lv~~at~d~~~n 86 (457)
T PRK10637 11 RDRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWAD-AGMLTLVE-G--PFDESLLDTCWLAIAATDDDAVN 86 (457)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHh-CCCEEEEe-C--CCChHHhCCCEEEEECCCCHHHh
Confidence 679999999999998877788788999999875422 2333333 33222221 1 12223335899999999987445
Q ss_pred HHHHhccccCCeEEEEccCCCCcccchHHHh-hccceEEEEe
Q 018382 259 EPYLSLLKLDGKLILTGVINTPMQFLTPMVM-LGRKAITGSF 299 (357)
Q Consensus 259 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~g~~ 299 (357)
+...+..+..|.++.........+|-....+ .+.+++.-+.
T Consensus 87 ~~i~~~a~~~~~lvN~~d~~~~~~f~~pa~~~~g~l~iaisT 128 (457)
T PRK10637 87 QRVSEAAEARRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSS 128 (457)
T ss_pred HHHHHHHHHcCcEEEECCCcccCeEEEeeEEecCCEEEEEEC
Confidence 5566667778888887665443444333322 2334444443
No 432
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.09 Score=45.87 Aligned_cols=73 Identities=12% Similarity=0.063 Sum_probs=49.9
Q ss_pred CeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc----CCc-E--EEcCCChhHHHHh----hCCccEEE
Q 018382 182 LRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL----GAD-Q--YLVSSDATRMQEA----ADSLDYII 249 (357)
Q Consensus 182 ~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~--vv~~~~~~~~~~~----~~~~d~v~ 249 (357)
++++|+|+ |++|..+++.+...|++|+++++++++.+...+.+ +.. + ..|..+.+.+++. ...+|+++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 47899987 99999999999888999999999887655443322 211 1 2344554443332 33679999
Q ss_pred EcCCC
Q 018382 250 DTVPA 254 (357)
Q Consensus 250 d~~g~ 254 (357)
.++|.
T Consensus 82 ~~ag~ 86 (243)
T PRK07102 82 IAVGT 86 (243)
T ss_pred ECCcC
Confidence 88764
No 433
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=95.30 E-value=0.14 Score=47.19 Aligned_cols=85 Identities=21% Similarity=0.279 Sum_probs=59.9
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH--- 256 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~--- 256 (357)
.|.+|.|+|.|.+|..+++.++..|.+|++.+++.+......+ . ...+.++....|+|+.++....
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~---------~--~~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLT---------Y--KDSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhh---------c--cCCHHHHHhcCCEEEEeCCCcHHHH
Confidence 5778999999999999999999999999999987544221100 0 1123455567899988887642
Q ss_pred --ChHHHHhccccCCeEEEEc
Q 018382 257 --PLEPYLSLLKLDGKLILTG 275 (357)
Q Consensus 257 --~~~~~~~~l~~~G~~v~~g 275 (357)
.....+..|+++..++.++
T Consensus 214 ~li~~~~l~~mk~gavlIN~a 234 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAA 234 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcC
Confidence 1234567788887777764
No 434
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=95.30 E-value=0.15 Score=53.64 Aligned_cols=95 Identities=22% Similarity=0.193 Sum_probs=67.2
Q ss_pred CCCeEEEEecChHHHHHHHHHHHc-CCe-------------EEEEeCCcHHHHHHHHhc-CCc-EEEcCCChhHHHHhhC
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAM-GHH-------------VTVISSSDKKRVEAMEHL-GAD-QYLVSSDATRMQEAAD 243 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~-g~~-------------V~~~~~~~~~~~~~~~~~-g~~-~vv~~~~~~~~~~~~~ 243 (357)
..++|+|+|+|.+|...++.+... +++ |++.+.+.++.+.+.+.+ +.+ ..+|..+.+.+.+...
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 356899999999999988888654 334 777777777777666656 432 3456667666666556
Q ss_pred CccEEEEcCCCCCChHHHHhccccCCeEEEE
Q 018382 244 SLDYIIDTVPANHPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 274 (357)
++|+|+.+++..-....+..+++.+=.++..
T Consensus 648 ~~DaVIsalP~~~H~~VAkaAieaGkHvv~e 678 (1042)
T PLN02819 648 QVDVVISLLPASCHAVVAKACIELKKHLVTA 678 (1042)
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCCEEEC
Confidence 7999999998864555666667766666544
No 435
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=95.30 E-value=0.084 Score=42.93 Aligned_cols=91 Identities=24% Similarity=0.333 Sum_probs=60.1
Q ss_pred eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC-----CcEEEcCC--ChhHHHHhhCCccEEEEcCCCC
Q 018382 183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG-----ADQYLVSS--DATRMQEAADSLDYIIDTVPAN 255 (357)
Q Consensus 183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g-----~~~vv~~~--~~~~~~~~~~~~d~v~d~~g~~ 255 (357)
+|.|+|+|..|.+++..+...|.+|+.-.++++..+.+.+.-. .+..+..+ -.+.+++...+.|+++-++...
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs~ 80 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPSQ 80 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-GG
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccHH
Confidence 5889999999999999999999999999999887777766221 00001000 0123445556899999999887
Q ss_pred CChHHHHhcccc---CCeEEEE
Q 018382 256 HPLEPYLSLLKL---DGKLILT 274 (357)
Q Consensus 256 ~~~~~~~~~l~~---~G~~v~~ 274 (357)
..+..++.+++ .+..+..
T Consensus 81 -~~~~~~~~l~~~l~~~~~ii~ 101 (157)
T PF01210_consen 81 -AHREVLEQLAPYLKKGQIIIS 101 (157)
T ss_dssp -GHHHHHHHHTTTSHTT-EEEE
T ss_pred -HHHHHHHHHhhccCCCCEEEE
Confidence 67777777666 3554443
No 436
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=95.30 E-value=0.13 Score=49.87 Aligned_cols=73 Identities=14% Similarity=0.217 Sum_probs=53.3
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH 256 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~ 256 (357)
-.+++++|+|+|++|.+++..+...|++|++..+++++.+.+.+.++.. .++..+ +.. ...+|+|++|+....
T Consensus 330 ~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~~---~~~-l~~~DiVInatP~g~ 402 (477)
T PRK09310 330 LNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLES---LPE-LHRIDIIINCLPPSV 402 (477)
T ss_pred cCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechhH---hcc-cCCCCEEEEcCCCCC
Confidence 3567899999999999999999999999999998888777666645432 222111 111 247999999987763
No 437
>PLN02214 cinnamoyl-CoA reductase
Probab=95.30 E-value=0.12 Score=47.87 Aligned_cols=74 Identities=19% Similarity=0.099 Sum_probs=52.3
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHH--HHHHhcC---C-cEE--EcCCChhHHHHhhCCccEEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRV--EAMEHLG---A-DQY--LVSSDATRMQEAADSLDYIID 250 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~--~~~~~~g---~-~~v--v~~~~~~~~~~~~~~~d~v~d 250 (357)
++++|||+|+ |.+|..+++.+...|.+|++++++.++.. .+.+ +. . -.+ .|..+.+.+.+...++|+||.
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRE-LEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHH-hhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 5678999987 99999999999888999999998765421 1122 21 1 112 245555556666678999999
Q ss_pred cCCC
Q 018382 251 TVPA 254 (357)
Q Consensus 251 ~~g~ 254 (357)
+++.
T Consensus 88 ~A~~ 91 (342)
T PLN02214 88 TASP 91 (342)
T ss_pred ecCC
Confidence 9875
No 438
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.29 E-value=0.042 Score=44.22 Aligned_cols=90 Identities=23% Similarity=0.211 Sum_probs=57.1
Q ss_pred EEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcC-------CC-hhHHHHhhCCccEEEEcCCCC
Q 018382 184 GGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVS-------SD-ATRMQEAADSLDYIIDTVPAN 255 (357)
Q Consensus 184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~-------~~-~~~~~~~~~~~d~v~d~~g~~ 255 (357)
|+|+|+|++|...+..++..|.+|..+.+.+ +.+..++ .|.....+. .. ..........+|+||-|+=..
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~ 78 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKE-QGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKAY 78 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHH-HCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSGG
T ss_pred CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhhhh-eeEEEEecccceecccccccCcchhccCCCcEEEEEeccc
Confidence 6889999999998888888999999999987 6666555 563221111 00 000122345899999988665
Q ss_pred CChHHHHh----ccccCCeEEEEcc
Q 018382 256 HPLEPYLS----LLKLDGKLILTGV 276 (357)
Q Consensus 256 ~~~~~~~~----~l~~~G~~v~~g~ 276 (357)
....+++ .+.+...++.+-+
T Consensus 79 -~~~~~l~~l~~~~~~~t~iv~~qN 102 (151)
T PF02558_consen 79 -QLEQALQSLKPYLDPNTTIVSLQN 102 (151)
T ss_dssp -GHHHHHHHHCTGEETTEEEEEESS
T ss_pred -chHHHHHHHhhccCCCcEEEEEeC
Confidence 3444444 4445556666644
No 439
>PRK04148 hypothetical protein; Provisional
Probab=95.29 E-value=0.11 Score=40.84 Aligned_cols=87 Identities=21% Similarity=0.147 Sum_probs=58.4
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEc-CCChhHHHHhhCCccEEEEcCCCCCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLV-SSDATRMQEAADSLDYIIDTVPANHP 257 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~-~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (357)
.++.+++++|.| .|...+..+...|.+|++++.+++..+.+++ .+.+.+.+ .-+++ ..+..++|+++..-...+.
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-~~~~~v~dDlf~p~--~~~y~~a~liysirpp~el 90 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-LGLNAFVDDLFNPN--LEIYKNAKLIYSIRPPRDL 90 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-hCCeEEECcCCCCC--HHHHhcCCEEEEeCCCHHH
Confidence 456789999998 8876666666789999999999998888877 66544332 11111 1334578888877776645
Q ss_pred hHHHHhccccCC
Q 018382 258 LEPYLSLLKLDG 269 (357)
Q Consensus 258 ~~~~~~~l~~~G 269 (357)
....++.-+.-|
T Consensus 91 ~~~~~~la~~~~ 102 (134)
T PRK04148 91 QPFILELAKKIN 102 (134)
T ss_pred HHHHHHHHHHcC
Confidence 555555544433
No 440
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.28 E-value=0.14 Score=45.83 Aligned_cols=92 Identities=20% Similarity=0.207 Sum_probs=61.5
Q ss_pred CeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCcE---------EEcCCChhHHHHhhCCccEEE-E
Q 018382 182 LRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGADQ---------YLVSSDATRMQEAADSLDYII-D 250 (357)
Q Consensus 182 ~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~~---------vv~~~~~~~~~~~~~~~d~v~-d 250 (357)
++|||+|+|. |-.+-.++++... +++++.-.++=.+..++.++..+ ++..+...+++.....+|+|| |
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fDvIi~D 156 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFDVIIVD 156 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCCEEEEc
Confidence 5999997643 3445577777765 89998888887888888676322 222222345555555899985 4
Q ss_pred cCCC---------CCChHHHHhccccCCeEEEE
Q 018382 251 TVPA---------NHPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 251 ~~g~---------~~~~~~~~~~l~~~G~~v~~ 274 (357)
+... .+..+.+.++|+++|.++.-
T Consensus 157 ~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q 189 (282)
T COG0421 157 STDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ 189 (282)
T ss_pred CCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence 4433 22456788999999999876
No 441
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.28 E-value=0.13 Score=44.51 Aligned_cols=83 Identities=23% Similarity=0.322 Sum_probs=61.4
Q ss_pred eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHH-HHHhcCCcEE-EcCCChhHHHHhh-CCccEEEEcCCCCCChH
Q 018382 183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVE-AMEHLGADQY-LVSSDATRMQEAA-DSLDYIIDTVPANHPLE 259 (357)
Q Consensus 183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~-~~~~~g~~~v-v~~~~~~~~~~~~-~~~d~v~d~~g~~~~~~ 259 (357)
+++|.|+|.+|...++.+...|..|+++..++++..+ +.+.++...+ .+..+++.++++. ..+|+++-+++.. ..+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d-~~N 80 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGND-EVN 80 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCC-HHH
Confidence 5788999999999999999999999999999998776 3323443322 3555666677664 4899999999986 455
Q ss_pred HHHhccc
Q 018382 260 PYLSLLK 266 (357)
Q Consensus 260 ~~~~~l~ 266 (357)
..+-.++
T Consensus 81 ~i~~~la 87 (225)
T COG0569 81 SVLALLA 87 (225)
T ss_pred HHHHHHH
Confidence 4444433
No 442
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.061 Score=47.47 Aligned_cols=69 Identities=17% Similarity=0.159 Sum_probs=49.0
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcC--C-cEEEcCCChhHHHHh-------hCCccEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLG--A-DQYLVSSDATRMQEA-------ADSLDYI 248 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g--~-~~vv~~~~~~~~~~~-------~~~~d~v 248 (357)
+++++||+|+ |++|..+++.+...|++|++++++..+. .+ . -...|..+.+.++++ .+++|++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 81 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDIL 81 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999987 9999999999988899999999875431 22 1 122355555433322 2378999
Q ss_pred EEcCCC
Q 018382 249 IDTVPA 254 (357)
Q Consensus 249 ~d~~g~ 254 (357)
++++|.
T Consensus 82 i~~ag~ 87 (260)
T PRK06523 82 VHVLGG 87 (260)
T ss_pred EECCcc
Confidence 999873
No 443
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=95.25 E-value=0.15 Score=42.47 Aligned_cols=75 Identities=16% Similarity=0.193 Sum_probs=53.8
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC--cEE---EcCCChhHHHH----hh---CCccE
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA--DQY---LVSSDATRMQE----AA---DSLDY 247 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~--~~v---v~~~~~~~~~~----~~---~~~d~ 247 (357)
.+.++|.|+ +++|.+..|.+...|++|.+.+...+..+.....+|. +|. .|.++++.+.. .. +.+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 355677776 8999999999999999999999887777777666774 332 24444333332 22 37999
Q ss_pred EEEcCCCC
Q 018382 248 IIDTVPAN 255 (357)
Q Consensus 248 v~d~~g~~ 255 (357)
+++|+|-.
T Consensus 94 lVncAGIt 101 (256)
T KOG1200|consen 94 LVNCAGIT 101 (256)
T ss_pred EEEcCccc
Confidence 99999864
No 444
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.25 E-value=0.017 Score=51.92 Aligned_cols=129 Identities=25% Similarity=0.324 Sum_probs=71.2
Q ss_pred eCcceEECCCCCCccccccccchhhhhhhhhhccCCCCCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHH
Q 018382 142 DQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEA 220 (357)
Q Consensus 142 ~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~ 220 (357)
+.+.++.+.+++.|-...--.+. .+..+|.+. .++|++||=+|+|. |.+++..++ +|+ +|++++-.+...+.+
T Consensus 127 ~~~~~I~idPg~AFGTG~H~TT~--lcl~~l~~~--~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a 200 (295)
T PF06325_consen 127 PDEIVIEIDPGMAFGTGHHPTTR--LCLELLEKY--VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAA 200 (295)
T ss_dssp TTSEEEEESTTSSS-SSHCHHHH--HHHHHHHHH--SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHH
T ss_pred CCcEEEEECCCCcccCCCCHHHH--HHHHHHHHh--ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHH
Confidence 34566777777766554311111 112233333 36889999998642 444444444 488 799999888766555
Q ss_pred HHhcC----CcEEEcCCChhHHHHhhCCccEEEEcCCCCC---ChHHHHhccccCCeEEEEccCCC
Q 018382 221 MEHLG----ADQYLVSSDATRMQEAADSLDYIIDTVPANH---PLEPYLSLLKLDGKLILTGVINT 279 (357)
Q Consensus 221 ~~~~g----~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~ 279 (357)
++..- .+.+.-....+ .....||+|+-..-... ......+.++++|.+++-|....
T Consensus 201 ~~N~~~N~~~~~~~v~~~~~---~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~ 263 (295)
T PF06325_consen 201 RENAELNGVEDRIEVSLSED---LVEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEE 263 (295)
T ss_dssp HHHHHHTT-TTCEEESCTSC---TCCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred HHHHHHcCCCeeEEEEEecc---cccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence 54221 12221111111 11258999997665541 23345667899999998887654
No 445
>PLN02427 UDP-apiose/xylose synthase
Probab=95.24 E-value=0.11 Score=48.86 Aligned_cols=74 Identities=15% Similarity=0.113 Sum_probs=51.6
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHhcC-------CcE-EEcCCChhHHHHhhCCccEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEHLG-------ADQ-YLVSSDATRMQEAADSLDYII 249 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~~g-------~~~-vv~~~~~~~~~~~~~~~d~v~ 249 (357)
+..+|||+|+ |.+|..+++.+... |.+|++++++.++...+.. .+ .+. ..|..+...+.++..++|+||
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~-~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi 91 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE-PDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI 91 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhc-cccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence 3457999987 99999999988877 5899999887665544433 22 111 124455555666666899999
Q ss_pred EcCCC
Q 018382 250 DTVPA 254 (357)
Q Consensus 250 d~~g~ 254 (357)
.+++.
T Consensus 92 HlAa~ 96 (386)
T PLN02427 92 NLAAI 96 (386)
T ss_pred Ecccc
Confidence 98863
No 446
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=95.23 E-value=0.073 Score=49.89 Aligned_cols=75 Identities=13% Similarity=0.095 Sum_probs=50.5
Q ss_pred CCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCc-EEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382 179 QSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGAD-QYLVSSDATRMQEAADSLDYIIDTVPA 254 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~d~v~d~~g~ 254 (357)
..+.+|||+|+ |.+|..++..+...|.+|+++++.......... ++.. +..|..+.+.+..+..++|+||.+++.
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~ 95 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDM-FCHEFHLVDLRVMENCLKVTKGVDHVFNLAAD 95 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccccc-ccceEEECCCCCHHHHHHHHhCCCEEEEcccc
Confidence 45688999987 999999999999999999999875332111001 1222 123445545555555689999999853
No 447
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.11 Score=45.72 Aligned_cols=75 Identities=12% Similarity=0.197 Sum_probs=48.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEE-eCCcHHHHHHHHhc---CCc---EEEcCCChhHHHH----hh-----
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVI-SSSDKKRVEAMEHL---GAD---QYLVSSDATRMQE----AA----- 242 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~-~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~----~~----- 242 (357)
.+.+++|+|+ |++|..+++.+...|++|++. .++.++.+...+.+ +.. ...|..+.+.+.+ +.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 3578999987 999999999888889998775 56655544333222 221 1235555443322 21
Q ss_pred ----CCccEEEEcCCC
Q 018382 243 ----DSLDYIIDTVPA 254 (357)
Q Consensus 243 ----~~~d~v~d~~g~ 254 (357)
.++|++|.++|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 258999998875
No 448
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.21 E-value=0.21 Score=45.13 Aligned_cols=39 Identities=23% Similarity=0.255 Sum_probs=34.4
Q ss_pred CeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHH
Q 018382 182 LRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEA 220 (357)
Q Consensus 182 ~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~ 220 (357)
++|.|+|+|.+|...++.+...|.+|++.++++++.+.+
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~ 42 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKNA 42 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence 579999999999999999988899999999998876643
No 449
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=95.21 E-value=0.14 Score=44.77 Aligned_cols=76 Identities=20% Similarity=0.200 Sum_probs=48.4
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHH---hcCCcEE---EcCCChhHHHH----h---hCC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAME---HLGADQY---LVSSDATRMQE----A---ADS 244 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~---~~g~~~v---v~~~~~~~~~~----~---~~~ 244 (357)
+++++||+|+ |++|..+++.+...|++|++..+ .+.+.....+ ..+.... .|..+.+.+.+ + .++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3578899987 99999999999999999888553 2333222211 1343322 35555433322 2 247
Q ss_pred ccEEEEcCCCC
Q 018382 245 LDYIIDTVPAN 255 (357)
Q Consensus 245 ~d~v~d~~g~~ 255 (357)
+|++++++|..
T Consensus 82 id~li~~ag~~ 92 (246)
T PRK12938 82 IDVLVNNAGIT 92 (246)
T ss_pred CCEEEECCCCC
Confidence 99999998853
No 450
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.20 E-value=0.11 Score=45.58 Aligned_cols=75 Identities=17% Similarity=0.137 Sum_probs=48.8
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeC-CcHHHHHHHHhcCCc-E--EEcCCChhHHHHh----h---CC-cc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISS-SDKKRVEAMEHLGAD-Q--YLVSSDATRMQEA----A---DS-LD 246 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~-~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~----~---~~-~d 246 (357)
.++++||+|+ |++|..++..+...|++|+++.+ ++++.+.+...++.. . ..|..+.+.+++. . +. +|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 3578999987 99999999988888999988654 444444444435422 1 2355454333222 1 23 99
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
++|.++|.
T Consensus 84 ~li~~ag~ 91 (253)
T PRK08642 84 TVVNNALA 91 (253)
T ss_pred EEEECCCc
Confidence 99998763
No 451
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.088 Score=45.56 Aligned_cols=69 Identities=20% Similarity=0.181 Sum_probs=48.6
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-cEEEcCCChhHHHHhh------CCccEEEEc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-DQYLVSSDATRMQEAA------DSLDYIIDT 251 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~------~~~d~v~d~ 251 (357)
.++++||+|+ |++|..+++.+...|.+|+++.++.++ . +.. -...|..+.+.+++.. .+.|++|.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----D-FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----c-cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence 3578999987 999999999998899999999987654 1 221 1234555544333322 268999998
Q ss_pred CCC
Q 018382 252 VPA 254 (357)
Q Consensus 252 ~g~ 254 (357)
+|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 875
No 452
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=95.18 E-value=0.17 Score=46.45 Aligned_cols=100 Identities=14% Similarity=0.155 Sum_probs=65.8
Q ss_pred hccCCCCCCCeEEEEecChHHHHHHHHHHHc-CC-eEEEEeCCcHHHHHHHHh---cCCcEEEcCCChhHHHHhhCCccE
Q 018382 173 SHFGLKQSGLRGGILGLGGVGHMGVLIAKAM-GH-HVTVISSSDKKRVEAMEH---LGADQYLVSSDATRMQEAADSLDY 247 (357)
Q Consensus 173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~-g~-~V~~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~~~~~~~d~ 247 (357)
+.+.+ +...++.|+|+|..|.+.++.+... .. +|++..++.++.+.+.++ +|..... .. ..++...+.|+
T Consensus 121 ~~La~-~~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~-~~---~~~eav~~aDi 195 (325)
T TIGR02371 121 KYLAR-KDSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRA-AT---DPREAVEGCDI 195 (325)
T ss_pred HHhCC-CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEE-eC---CHHHHhccCCE
Confidence 44444 4568889999999999876665543 44 899999998887665543 3432111 11 23345568999
Q ss_pred EEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 248 IIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
|+-|+.+...+ ...+.++++-.+..+|...
T Consensus 196 VitaT~s~~P~-~~~~~l~~g~~v~~vGs~~ 225 (325)
T TIGR02371 196 LVTTTPSRKPV-VKADWVSEGTHINAIGADA 225 (325)
T ss_pred EEEecCCCCcE-ecHHHcCCCCEEEecCCCC
Confidence 99988765322 1345678888888888653
No 453
>PRK05855 short chain dehydrogenase; Validated
Probab=95.18 E-value=0.088 Score=52.29 Aligned_cols=76 Identities=22% Similarity=0.211 Sum_probs=53.6
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHh---cCCc---EEEcCCChhHHHHhh-------CCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEH---LGAD---QYLVSSDATRMQEAA-------DSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~-------~~~ 245 (357)
.+.++||+|+ |++|.++++-+...|++|+++++++++.+.+.+. .|.. ...|..+.+.+.++. +.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 3578999987 9999999999888999999999988766544332 3421 124556654433322 368
Q ss_pred cEEEEcCCCC
Q 018382 246 DYIIDTVPAN 255 (357)
Q Consensus 246 d~v~d~~g~~ 255 (357)
|++++++|..
T Consensus 394 d~lv~~Ag~~ 403 (582)
T PRK05855 394 DIVVNNAGIG 403 (582)
T ss_pred cEEEECCccC
Confidence 9999998763
No 454
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.17 E-value=0.091 Score=47.99 Aligned_cols=75 Identities=12% Similarity=0.085 Sum_probs=50.5
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHH---HHHhcC---CcEEE--cCCChhHHHHhhCCccEEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVE---AMEHLG---ADQYL--VSSDATRMQEAADSLDYIID 250 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~---~~~~~g---~~~vv--~~~~~~~~~~~~~~~d~v~d 250 (357)
.+++|||+|+ |.+|..++..+...|.+|++++++..+... +....+ .-..+ |..+++.+..+..++|+||.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 3578999986 999999999998889999998876543221 111011 11222 44445556666668999999
Q ss_pred cCCC
Q 018382 251 TVPA 254 (357)
Q Consensus 251 ~~g~ 254 (357)
+++.
T Consensus 83 ~A~~ 86 (322)
T PLN02662 83 TASP 86 (322)
T ss_pred eCCc
Confidence 8863
No 455
>PRK08317 hypothetical protein; Provisional
Probab=95.16 E-value=0.092 Score=45.54 Aligned_cols=99 Identities=22% Similarity=0.249 Sum_probs=63.0
Q ss_pred CCCCCCeEEEEecChHHHHHHHHHHHcC--CeEEEEeCCcHHHHHHHHhc---CCcEEEcCCChhHHHHhhCCccEEEEc
Q 018382 177 LKQSGLRGGILGLGGVGHMGVLIAKAMG--HHVTVISSSDKKRVEAMEHL---GADQYLVSSDATRMQEAADSLDYIIDT 251 (357)
Q Consensus 177 ~~~~~~~VlI~G~g~~G~~ai~la~~~g--~~V~~~~~~~~~~~~~~~~~---g~~~vv~~~~~~~~~~~~~~~d~v~d~ 251 (357)
.+.++++||.+|+|. |..+..+++..+ .++++++.+++..+.+++.. +....+...+........+.+|+|+..
T Consensus 16 ~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 94 (241)
T PRK08317 16 AVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDAVRSD 94 (241)
T ss_pred CCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCceEEEEe
Confidence 347889999999865 788888888763 58999999988777776631 111111111111111112468888753
Q ss_pred C-----CC-CCChHHHHhccccCCeEEEEcc
Q 018382 252 V-----PA-NHPLEPYLSLLKLDGKLILTGV 276 (357)
Q Consensus 252 ~-----g~-~~~~~~~~~~l~~~G~~v~~g~ 276 (357)
. .. ...+..+.++|+++|.++....
T Consensus 95 ~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 95 RVLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred chhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 2 11 1256778899999999987653
No 456
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.15 E-value=0.47 Score=42.77 Aligned_cols=91 Identities=18% Similarity=0.188 Sum_probs=54.2
Q ss_pred CeEEEEecChHHHH-HHHHHHHcCCeEEEEeCCcHH---HHHHHHhcCCcEEEcCCChhHHHHh--hCCccEEEEcCCCC
Q 018382 182 LRGGILGLGGVGHM-GVLIAKAMGHHVTVISSSDKK---RVEAMEHLGADQYLVSSDATRMQEA--ADSLDYIIDTVPAN 255 (357)
Q Consensus 182 ~~VlI~G~g~~G~~-ai~la~~~g~~V~~~~~~~~~---~~~~~~~~g~~~vv~~~~~~~~~~~--~~~~d~v~d~~g~~ 255 (357)
-+|.|+|+|.+|.. +..+.+.-+.++.+++..+.. ...+++ +|..... .+.+.+.+. ...+|+||++++..
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~-~Gi~~~~--~~ie~LL~~~~~~dIDiVf~AT~a~ 81 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARR-LGVATSA--EGIDGLLAMPEFDDIDIVFDATSAG 81 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHH-cCCCccc--CCHHHHHhCcCCCCCCEEEECCCHH
Confidence 46899999999987 444445446788877654332 244444 8854332 222222221 14699999999987
Q ss_pred CChHHHHhccccCCeEEEEc
Q 018382 256 HPLEPYLSLLKLDGKLILTG 275 (357)
Q Consensus 256 ~~~~~~~~~l~~~G~~v~~g 275 (357)
...+.+.++.+.|-.++...
T Consensus 82 ~H~e~a~~a~eaGk~VID~s 101 (302)
T PRK08300 82 AHVRHAAKLREAGIRAIDLT 101 (302)
T ss_pred HHHHHHHHHHHcCCeEEECC
Confidence 44455555555555555543
No 457
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=95.15 E-value=0.054 Score=49.50 Aligned_cols=71 Identities=17% Similarity=0.151 Sum_probs=52.2
Q ss_pred eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-EEcCCChhHHHHhhCCccEEEEcCCC
Q 018382 183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-YLVSSDATRMQEAADSLDYIIDTVPA 254 (357)
Q Consensus 183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~d~v~d~~g~ 254 (357)
+|||+|+ |.+|..+++.+...|.+|+++++++++.....+ .+... ..|..+.+.+.+...++|+||++++.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~ 74 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEG-LDVEIVEGDLRDPASLRKAVAGCRALFHVAAD 74 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccccc-CCceEEEeeCCCHHHHHHHHhCCCEEEEecee
Confidence 6899987 999999999998889999999987665433322 34332 23556666666666789999998754
No 458
>PRK08309 short chain dehydrogenase; Provisional
Probab=95.15 E-value=0.58 Score=38.87 Aligned_cols=86 Identities=15% Similarity=0.103 Sum_probs=54.1
Q ss_pred eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC---cE--EEcCCChhHHHHh-------hCCccEEEE
Q 018382 183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA---DQ--YLVSSDATRMQEA-------ADSLDYIID 250 (357)
Q Consensus 183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~---~~--vv~~~~~~~~~~~-------~~~~d~v~d 250 (357)
+++|+|++++|..+++.+...|++|++..+++++.+.+...++. -. ..|.++.+.+.+. .+++|++|+
T Consensus 2 ~vlVtGGtG~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~ 81 (177)
T PRK08309 2 HALVIGGTGMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVA 81 (177)
T ss_pred EEEEECcCHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 57899875566566666667799999999887776655443431 11 1366665443332 136899999
Q ss_pred cCCCCCChHHHHhccccCC
Q 018382 251 TVPANHPLEPYLSLLKLDG 269 (357)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G 269 (357)
.+... .-+......+..|
T Consensus 82 ~vh~~-~~~~~~~~~~~~g 99 (177)
T PRK08309 82 WIHSS-AKDALSVVCRELD 99 (177)
T ss_pred ecccc-chhhHHHHHHHHc
Confidence 88776 4445555555444
No 459
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.11 E-value=0.15 Score=43.94 Aligned_cols=94 Identities=15% Similarity=0.105 Sum_probs=57.8
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE---------cCC-----ChhHHH---Hh
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL---------VSS-----DATRMQ---EA 241 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv---------~~~-----~~~~~~---~~ 241 (357)
.++.+||+.|+|. |.-++-||. .|.+|++++.++...+.+.++-+..... ... ..+... ..
T Consensus 36 ~~~~rvL~~gCG~-G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~~ 113 (218)
T PRK13255 36 PAGSRVLVPLCGK-SLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAAD 113 (218)
T ss_pred CCCCeEEEeCCCC-hHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCccc
Confidence 4678999998853 566666665 6999999999998877664434422100 000 001111 11
Q ss_pred hCCccEEEEcCCC--------CCChHHHHhccccCCeEEEE
Q 018382 242 ADSLDYIIDTVPA--------NHPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 242 ~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~ 274 (357)
...+|.|+|..-- ...+..+.+.|+|+|+++.+
T Consensus 114 ~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 114 LADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred CCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 1368999986531 12467788899999975543
No 460
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=95.11 E-value=0.14 Score=45.26 Aligned_cols=75 Identities=17% Similarity=0.128 Sum_probs=50.0
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHH---hcCCc---EEEcCCChhHHHHh-------hCC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAME---HLGAD---QYLVSSDATRMQEA-------ADS 244 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~---~~g~~---~vv~~~~~~~~~~~-------~~~ 244 (357)
+++++||+|+ |++|..+++.+...|++|+++.+++. ....+.+ ..+.. ...|..+.+.+.++ .++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5789999987 99999999999999999988877543 2222221 13422 22455554433332 136
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|+++.++|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 8999998875
No 461
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.10 E-value=0.29 Score=37.25 Aligned_cols=90 Identities=20% Similarity=0.186 Sum_probs=59.8
Q ss_pred EEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE-cCCChhHHHHhh-CCccEEEEcCCCCCChHH-
Q 018382 184 GGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL-VSSDATRMQEAA-DSLDYIIDTVPANHPLEP- 260 (357)
Q Consensus 184 VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~-~~~d~v~d~~g~~~~~~~- 260 (357)
|+|.|.|.+|...++.++..+.+|++++.++++.+.+.+ .|...+. |..+++.+++.. ..++.++-+.+....-..
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~~ 79 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEELRE-EGVEVIYGDATDPEVLERAGIEKADAVVILTDDDEENLLI 79 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-TTSEEEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh-cccccccccchhhhHHhhcCccccCEEEEccCCHHHHHHH
Confidence 578899999999999999966699999999999888888 6644332 334455555553 378888877776422112
Q ss_pred --HHhccccCCeEEEE
Q 018382 261 --YLSLLKLDGKLILT 274 (357)
Q Consensus 261 --~~~~l~~~G~~v~~ 274 (357)
.++.+.+..+++..
T Consensus 80 ~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 80 ALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHTTTSEEEEE
T ss_pred HHHHHHHCCCCeEEEE
Confidence 23334455555533
No 462
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.10 E-value=0.15 Score=45.46 Aligned_cols=96 Identities=16% Similarity=0.236 Sum_probs=71.3
Q ss_pred cccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHH
Q 018382 160 PLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRM 238 (357)
Q Consensus 160 ~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~ 238 (357)
.+||........|...+.--.|++|+|+|. +.+|.-++.++...|++|++..+.. + .+
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t-~--------------------~l 195 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRT-R--------------------NL 195 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCC-C--------------------CH
Confidence 467776666666766655458999999997 9999999999999999998862211 1 12
Q ss_pred HHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 239 QEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
++.....|+|+-++|.+..+... .++++-.++++|...
T Consensus 196 ~~~~~~ADIVI~avg~~~~v~~~--~ik~GavVIDvgin~ 233 (284)
T PRK14179 196 AEVARKADILVVAIGRGHFVTKE--FVKEGAVVIDVGMNR 233 (284)
T ss_pred HHHHhhCCEEEEecCccccCCHH--HccCCcEEEEeccee
Confidence 34455799999999998665544 488998898888653
No 463
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=95.09 E-value=0.21 Score=45.30 Aligned_cols=88 Identities=18% Similarity=0.203 Sum_probs=61.9
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCCC-
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHP- 257 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~~- 257 (357)
-.+++|.|+|-|.+|.++++.++..|.+|++..+.....+.+.. .|.. +. .+.++....|+|+-++.....
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~-~G~~-v~------sl~Eaak~ADVV~llLPd~~t~ 85 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKA-DGFE-VM------SVSEAVRTAQVVQMLLPDEQQA 85 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHH-cCCE-EC------CHHHHHhcCCEEEEeCCChHHH
Confidence 36789999999999999999999999999988765444344444 6753 21 244566678999988876422
Q ss_pred --h-HHHHhccccCCeEEEE
Q 018382 258 --L-EPYLSLLKLDGKLILT 274 (357)
Q Consensus 258 --~-~~~~~~l~~~G~~v~~ 274 (357)
+ ...+..|+++..++..
T Consensus 86 ~V~~~eil~~MK~GaiL~f~ 105 (335)
T PRK13403 86 HVYKAEVEENLREGQMLLFS 105 (335)
T ss_pred HHHHHHHHhcCCCCCEEEEC
Confidence 2 2356677777665543
No 464
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=95.08 E-value=0.2 Score=45.17 Aligned_cols=62 Identities=24% Similarity=0.245 Sum_probs=46.4
Q ss_pred hhhhh---hccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCC---cHHHHHHHHhcCCcEEE
Q 018382 168 VFSPL---SHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSS---DKKRVEAMEHLGADQYL 230 (357)
Q Consensus 168 a~~~l---~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~---~~~~~~~~~~~g~~~vv 230 (357)
||.++ ++.+.+.||+++||=.. |.+|...+-++...|++++++.+. .+|+..++. ||+.-+.
T Consensus 87 a~sMi~~Ae~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a-~Gaeii~ 155 (362)
T KOG1252|consen 87 AWSMIEDAEKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRA-LGAEIIL 155 (362)
T ss_pred HHHHHHHHHHcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHH-cCCEEEe
Confidence 45555 34567799999999875 888998999999999999988743 345555555 8876554
No 465
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.04 E-value=0.4 Score=40.49 Aligned_cols=98 Identities=16% Similarity=0.119 Sum_probs=57.6
Q ss_pred CCCCCeEEEEecChHHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHh---cCCc--EEEcCCChhHHHHhhCCccEEEEc
Q 018382 178 KQSGLRGGILGLGGVGHMGVLIAKAM-GHHVTVISSSDKKRVEAMEH---LGAD--QYLVSSDATRMQEAADSLDYIIDT 251 (357)
Q Consensus 178 ~~~~~~VlI~G~g~~G~~ai~la~~~-g~~V~~~~~~~~~~~~~~~~---~g~~--~vv~~~~~~~~~~~~~~~d~v~d~ 251 (357)
.+++++||=+|+|. |..++.+++.. +.+|++++.+++..+.++++ ++.+ .++..+..+.+..+...+|.++-.
T Consensus 38 ~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~v~~~ 116 (196)
T PRK07402 38 LEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDRVCIE 116 (196)
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCEEEEE
Confidence 37888888887632 44455555544 46999999998877666542 4543 233322222233333334554332
Q ss_pred CCCC--CChHHHHhccccCCeEEEEcc
Q 018382 252 VPAN--HPLEPYLSLLKLDGKLILTGV 276 (357)
Q Consensus 252 ~g~~--~~~~~~~~~l~~~G~~v~~g~ 276 (357)
.+.. ..++.+.+.|+++|+++....
T Consensus 117 ~~~~~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 117 GGRPIKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred CCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence 2221 246778889999999887643
No 466
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=95.04 E-value=0.15 Score=46.28 Aligned_cols=90 Identities=23% Similarity=0.216 Sum_probs=58.6
Q ss_pred eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE-----EEcCCChhHHHHhhCCccEEEEcCCCCCC
Q 018382 183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ-----YLVSSDATRMQEAADSLDYIIDTVPANHP 257 (357)
Q Consensus 183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~-----vv~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (357)
+|+|+|+|.+|.+.+..+...|.+|+++++++++.+.+.+ .|... .......+..... ..+|+||-++... .
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~-~ 78 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALNE-NGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAY-Q 78 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHH-cCCcccCCceeecccCCCChhHc-CCCCEEEEecccc-c
Confidence 5889999999999888888889999999997777766665 45421 0000000111223 6799999988876 4
Q ss_pred hHHHHhccc----cCCeEEEEc
Q 018382 258 LEPYLSLLK----LDGKLILTG 275 (357)
Q Consensus 258 ~~~~~~~l~----~~G~~v~~g 275 (357)
...+++.++ ++..++.+.
T Consensus 79 ~~~~~~~l~~~l~~~~~iv~~~ 100 (304)
T PRK06522 79 LPAALPSLAPLLGPDTPVLFLQ 100 (304)
T ss_pred HHHHHHHHhhhcCCCCEEEEec
Confidence 555555544 344566553
No 467
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=95.00 E-value=0.11 Score=44.95 Aligned_cols=72 Identities=21% Similarity=0.170 Sum_probs=53.3
Q ss_pred EEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCC-cEEEcCCChhHHHHhhC--CccEEEEcCCCC
Q 018382 184 GGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGA-DQYLVSSDATRMQEAAD--SLDYIIDTVPAN 255 (357)
Q Consensus 184 VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~--~~d~v~d~~g~~ 255 (357)
|||+|+ |-+|..++..+...|.+|+.+.++............. ....|..+.+.++.+.. .+|.||.+++..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence 789987 9999999999999999999888887765544442332 22346666666665554 679999998864
No 468
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.00 E-value=0.31 Score=45.36 Aligned_cols=92 Identities=18% Similarity=0.274 Sum_probs=63.1
Q ss_pred CeEEEEec-ChHHHHHHHHHHHc--CCeEEEEe--CCcHHHHHHHHhcCCcEEEcCCCh--hHH----------------
Q 018382 182 LRGGILGL-GGVGHMGVLIAKAM--GHHVTVIS--SSDKKRVEAMEHLGADQYLVSSDA--TRM---------------- 238 (357)
Q Consensus 182 ~~VlI~G~-g~~G~~ai~la~~~--g~~V~~~~--~~~~~~~~~~~~~g~~~vv~~~~~--~~~---------------- 238 (357)
++|.|+|+ |.+|..++++++.. ..+|++.+ ++.++.....++|+...++-.+.. ..+
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 57899996 99999999998765 45888776 444566666666888776544331 111
Q ss_pred --HHhhC--CccEEEEcCCCCCChHHHHhccccCCeEEE
Q 018382 239 --QEAAD--SLDYIIDTVPANHPLEPYLSLLKLDGKLIL 273 (357)
Q Consensus 239 --~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 273 (357)
.++.. .+|+|+++.++...+...+..++.|-++.+
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 11111 589999998886567778888877766554
No 469
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=95.00 E-value=0.43 Score=44.53 Aligned_cols=76 Identities=8% Similarity=0.009 Sum_probs=46.9
Q ss_pred CCCCeEEEEec-ChHHHH--HHHHHHHcCCeEEEEeCCcH--H-------------HHHHHHhcCCc-EE--EcCCChhH
Q 018382 179 QSGLRGGILGL-GGVGHM--GVLIAKAMGHHVTVISSSDK--K-------------RVEAMEHLGAD-QY--LVSSDATR 237 (357)
Q Consensus 179 ~~~~~VlI~G~-g~~G~~--ai~la~~~g~~V~~~~~~~~--~-------------~~~~~~~~g~~-~v--v~~~~~~~ 237 (357)
..++++||+|+ +++|++ .++.+ ..|++|+++....+ + ...+.+..|.. .. .|..+++.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 34578999986 899999 45666 78999888873221 1 22223335643 22 34444433
Q ss_pred ----HHHhh---CCccEEEEcCCCC
Q 018382 238 ----MQEAA---DSLDYIIDTVPAN 255 (357)
Q Consensus 238 ----~~~~~---~~~d~v~d~~g~~ 255 (357)
++++. +++|+++++++.+
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 23332 3799999998876
No 470
>PRK14967 putative methyltransferase; Provisional
Probab=94.99 E-value=0.24 Score=42.80 Aligned_cols=92 Identities=25% Similarity=0.269 Sum_probs=58.9
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHh---cCCcEEEcCCChhHHHHh-hCCccEEEEcCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEH---LGADQYLVSSDATRMQEA-ADSLDYIIDTVP 253 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~~~-~~~~d~v~d~~g 253 (357)
+++++||-+|+|. |..++.+++. +. +|++++.++...+.++++ .+.+..+...+ ..... .+.+|+|+...+
T Consensus 35 ~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d--~~~~~~~~~fD~Vi~npP 110 (223)
T PRK14967 35 GPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGD--WARAVEFRPFDVVVSNPP 110 (223)
T ss_pred CCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECc--hhhhccCCCeeEEEECCC
Confidence 7889999999976 8888888775 66 999999988776654442 34322222222 21222 247999986432
Q ss_pred CC---------------------------CChHHHHhccccCCeEEEE
Q 018382 254 AN---------------------------HPLEPYLSLLKLDGKLILT 274 (357)
Q Consensus 254 ~~---------------------------~~~~~~~~~l~~~G~~v~~ 274 (357)
-. ..+..+.+.|+++|+++.+
T Consensus 111 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 111 YVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred CCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 10 0234567889999998865
No 471
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.99 E-value=0.19 Score=48.78 Aligned_cols=73 Identities=16% Similarity=0.200 Sum_probs=48.7
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN 255 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~ 255 (357)
-.+++|+|+|.|+.|++++++++..|++|++.++.......+.+++|.......+..+. + ..+|.|+-+.|-.
T Consensus 13 ~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~---~-~~~d~vV~Spgi~ 85 (473)
T PRK00141 13 ELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQ---L-DSFSLVVTSPGWR 85 (473)
T ss_pred ccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhH---h-cCCCEEEeCCCCC
Confidence 34578999999999999999999999999998876554433334367644332222221 2 3567777655443
No 472
>PRK06046 alanine dehydrogenase; Validated
Probab=94.98 E-value=0.2 Score=46.00 Aligned_cols=99 Identities=20% Similarity=0.318 Sum_probs=63.5
Q ss_pred hccCCCCCCCeEEEEecChHHHHHHHHHH-HcCC-eEEEEeCCcHHHHHHHHhc----CCcEEEcCCChhHHHHhhCCcc
Q 018382 173 SHFGLKQSGLRGGILGLGGVGHMGVLIAK-AMGH-HVTVISSSDKKRVEAMEHL----GADQYLVSSDATRMQEAADSLD 246 (357)
Q Consensus 173 ~~~~~~~~~~~VlI~G~g~~G~~ai~la~-~~g~-~V~~~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~~~d 246 (357)
....+ ....++.|+|+|..|...++.+. ..+. +|.+..++.++.+.+.+++ |....+ ..+ .++... .|
T Consensus 122 ~~La~-~~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~-~~~---~~~~l~-aD 195 (326)
T PRK06046 122 KYLAR-KDSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTV-AED---IEEACD-CD 195 (326)
T ss_pred HHhCC-CCCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEE-eCC---HHHHhh-CC
Confidence 33443 44578899999999998887665 4466 6777788877777666544 322111 112 223334 99
Q ss_pred EEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 247 YIIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
+|+.|+++...+ ...+.++++-.+..+|...
T Consensus 196 iVv~aTps~~P~-~~~~~l~~g~hV~~iGs~~ 226 (326)
T PRK06046 196 ILVTTTPSRKPV-VKAEWIKEGTHINAIGADA 226 (326)
T ss_pred EEEEecCCCCcE-ecHHHcCCCCEEEecCCCC
Confidence 999998876333 2234678888888888654
No 473
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.97 E-value=0.23 Score=43.09 Aligned_cols=75 Identities=20% Similarity=0.218 Sum_probs=48.6
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHH-HHHHHH---hcCCc-EE--EcCCChhHHHH----hh---CC
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKK-RVEAME---HLGAD-QY--LVSSDATRMQE----AA---DS 244 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~-~~~~~~---~~g~~-~v--v~~~~~~~~~~----~~---~~ 244 (357)
.++++||+|+ |.+|..++..+...|++|+++.++..+ .+...+ ..+.. .. .|..+.+.+.+ +. .+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999987 999999999999889999887776543 222211 12322 12 25555443332 22 36
Q ss_pred ccEEEEcCCC
Q 018382 245 LDYIIDTVPA 254 (357)
Q Consensus 245 ~d~v~d~~g~ 254 (357)
+|+++.++|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999998875
No 474
>PLN02823 spermine synthase
Probab=94.93 E-value=0.22 Score=45.90 Aligned_cols=94 Identities=14% Similarity=0.161 Sum_probs=59.2
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCcHHHHHHHHhcCCc---------EEEcCCChhHHHHhhCCccEEE
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSDKKRVEAMEHLGAD---------QYLVSSDATRMQEAADSLDYII 249 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~~~~~~~~~~~g~~---------~vv~~~~~~~~~~~~~~~d~v~ 249 (357)
..++|||+|+|. |..+..+++..+. +|+++.-+++-.+.+++.++.. +++..+.-.++++..+.+|+||
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~~~~~yDvIi 181 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEKRDEKFDVII 181 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhhCCCCccEEE
Confidence 346899998753 4555677776665 8999998888788887766521 1222222234544445899996
Q ss_pred EcCCCC------------CChH-HHHhccccCCeEEEE
Q 018382 250 DTVPAN------------HPLE-PYLSLLKLDGKLILT 274 (357)
Q Consensus 250 d~~g~~------------~~~~-~~~~~l~~~G~~v~~ 274 (357)
-=+..+ +.++ .+.+.|+++|.++.-
T Consensus 182 ~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q 219 (336)
T PLN02823 182 GDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ 219 (336)
T ss_pred ecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence 322111 1234 677889999998754
No 475
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=94.91 E-value=0.06 Score=41.66 Aligned_cols=91 Identities=21% Similarity=0.164 Sum_probs=53.4
Q ss_pred eEEEEec-ChHHHHHHHHHHHc-CCeEEEEeCCcH-HHHHHHHhcC----C-cEEEcCCChhHHHHhhCCccEEEEcCCC
Q 018382 183 RGGILGL-GGVGHMGVLIAKAM-GHHVTVISSSDK-KRVEAMEHLG----A-DQYLVSSDATRMQEAADSLDYIIDTVPA 254 (357)
Q Consensus 183 ~VlI~G~-g~~G~~ai~la~~~-g~~V~~~~~~~~-~~~~~~~~~g----~-~~vv~~~~~~~~~~~~~~~d~v~d~~g~ 254 (357)
+|.|+|+ |.+|..+++++... .++++.+..++. .-..+...++ . +..+...+.+ .....|+||.|++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Dvvf~a~~~ 76 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPE----ELSDVDVVFLALPH 76 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGH----HHTTESEEEE-SCH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchh----HhhcCCEEEecCch
Confidence 5889996 99999999999875 346555444433 2222333232 1 2222221111 22689999999998
Q ss_pred CCChHHHHhccccCCeEEEEccC
Q 018382 255 NHPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 255 ~~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
....+..-+.++.+-++++.+..
T Consensus 77 ~~~~~~~~~~~~~g~~ViD~s~~ 99 (121)
T PF01118_consen 77 GASKELAPKLLKAGIKVIDLSGD 99 (121)
T ss_dssp HHHHHHHHHHHHTTSEEEESSST
T ss_pred hHHHHHHHHHhhCCcEEEeCCHH
Confidence 73444455555666678777553
No 476
>PLN00198 anthocyanidin reductase; Provisional
Probab=94.91 E-value=0.15 Score=47.11 Aligned_cols=75 Identities=11% Similarity=0.131 Sum_probs=51.1
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHH--Hhc---CCcEE--EcCCChhHHHHhhCCccEEEEc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAM--EHL---GADQY--LVSSDATRMQEAADSLDYIIDT 251 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~--~~~---g~~~v--v~~~~~~~~~~~~~~~d~v~d~ 251 (357)
.+.+|||+|+ |.+|..++..+...|.+|++++++........ ..+ +.-.+ .|..+.+.+.+...++|+||.+
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 87 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHV 87 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEe
Confidence 4678999986 99999999999888999988887654332211 112 21122 2555555566666689999998
Q ss_pred CCC
Q 018382 252 VPA 254 (357)
Q Consensus 252 ~g~ 254 (357)
++.
T Consensus 88 A~~ 90 (338)
T PLN00198 88 ATP 90 (338)
T ss_pred CCC
Confidence 863
No 477
>PRK07578 short chain dehydrogenase; Provisional
Probab=94.90 E-value=0.26 Score=41.47 Aligned_cols=60 Identities=17% Similarity=0.220 Sum_probs=42.0
Q ss_pred eEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhh---CCccEEEEcCCC
Q 018382 183 RGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAA---DSLDYIIDTVPA 254 (357)
Q Consensus 183 ~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~---~~~d~v~d~~g~ 254 (357)
++||+|+ |++|.+++..+... .+|+++.++.. ....|..+.+.+++.. +++|+++.++|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEECCCC
Confidence 6899987 99999888877666 89999887643 1234555554444432 378999988875
No 478
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.90 E-value=0.16 Score=46.16 Aligned_cols=75 Identities=20% Similarity=0.254 Sum_probs=48.8
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHH---hcCCcE---EEcCCChhHHHHh------hCCc
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDK-KRVEAME---HLGADQ---YLVSSDATRMQEA------ADSL 245 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~-~~~~~~~---~~g~~~---vv~~~~~~~~~~~------~~~~ 245 (357)
.++++||+|+ +++|.+.++.+...|++|++.++... +.+.+.+ ..|... ..|..+.+.+.++ .+.+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 5688999987 99999999888888999999876432 3222222 134222 2344444333322 2479
Q ss_pred cEEEEcCCC
Q 018382 246 DYIIDTVPA 254 (357)
Q Consensus 246 d~v~d~~g~ 254 (357)
|++|+++|.
T Consensus 91 D~li~nAG~ 99 (306)
T PRK07792 91 DIVVNNAGI 99 (306)
T ss_pred CEEEECCCC
Confidence 999999875
No 479
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=94.86 E-value=0.15 Score=46.19 Aligned_cols=74 Identities=19% Similarity=0.154 Sum_probs=55.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHH---HHHHHhcC-Cc---E--EEcCCChhHHHHhhCCccEEE
Q 018382 180 SGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKR---VEAMEHLG-AD---Q--YLVSSDATRMQEAADSLDYII 249 (357)
Q Consensus 180 ~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~---~~~~~~~g-~~---~--vv~~~~~~~~~~~~~~~d~v~ 249 (357)
.+..|+|+|+ |-+|...+..+...|++|.+++|+.+.. +.+++ +. +. . .-|..+.+.+.....|.|.||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~-l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf 83 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRK-LEGAKERLKLFKADLLDEGSFDKAIDGCDGVF 83 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHh-cccCcccceEEeccccccchHHHHHhCCCEEE
Confidence 5688999998 9999999999999999999999988763 23444 54 22 1 224455666777777999999
Q ss_pred EcCCC
Q 018382 250 DTVPA 254 (357)
Q Consensus 250 d~~g~ 254 (357)
-++..
T Consensus 84 H~Asp 88 (327)
T KOG1502|consen 84 HTASP 88 (327)
T ss_pred EeCcc
Confidence 87654
No 480
>PRK07201 short chain dehydrogenase; Provisional
Probab=94.86 E-value=0.14 Score=51.82 Aligned_cols=74 Identities=16% Similarity=0.282 Sum_probs=52.8
Q ss_pred CCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhc---CCc---EEEcCCChhHHHHh-------hCCcc
Q 018382 181 GLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHL---GAD---QYLVSSDATRMQEA-------ADSLD 246 (357)
Q Consensus 181 ~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~~~d 246 (357)
++++||+|+ |++|..++..+...|++|+++++++++.+.+.+.+ +.. ...|..+.+.+++. .+.+|
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 450 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD 450 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 678999987 99999999988888999999999887765554322 322 12355554433332 13699
Q ss_pred EEEEcCCC
Q 018382 247 YIIDTVPA 254 (357)
Q Consensus 247 ~v~d~~g~ 254 (357)
++++++|.
T Consensus 451 ~li~~Ag~ 458 (657)
T PRK07201 451 YLVNNAGR 458 (657)
T ss_pred EEEECCCC
Confidence 99999984
No 481
>PRK00536 speE spermidine synthase; Provisional
Probab=94.84 E-value=0.067 Score=47.25 Aligned_cols=93 Identities=17% Similarity=0.122 Sum_probs=60.4
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCCh-----hHHHHhh-CCccEEE-EcC
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDA-----TRMQEAA-DSLDYII-DTV 252 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~-----~~~~~~~-~~~d~v~-d~~ 252 (357)
.-++|||+|+|- |.++-.++|+-. +|+.+.-.++-.+..++.++.-+- ..+++ .++.+.. +.+|+|| |+.
T Consensus 72 ~pk~VLIiGGGD-Gg~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~-~~~DpRv~l~~~~~~~~~~~fDVIIvDs~ 148 (262)
T PRK00536 72 ELKEVLIVDGFD-LELAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHE-VKNNKNFTHAKQLLDLDIKKYDLIICLQE 148 (262)
T ss_pred CCCeEEEEcCCc-hHHHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHH-hhcCCCEEEeehhhhccCCcCCEEEEcCC
Confidence 348999997643 445668888754 899988877766666664552110 01111 1233322 5799984 656
Q ss_pred CCCCChHHHHhccccCCeEEEEc
Q 018382 253 PANHPLEPYLSLLKLDGKLILTG 275 (357)
Q Consensus 253 g~~~~~~~~~~~l~~~G~~v~~g 275 (357)
-+.+..+.+.++|+++|.++.-+
T Consensus 149 ~~~~fy~~~~~~L~~~Gi~v~Qs 171 (262)
T PRK00536 149 PDIHKIDGLKRMLKEDGVFISVA 171 (262)
T ss_pred CChHHHHHHHHhcCCCcEEEECC
Confidence 55556778999999999998653
No 482
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.82 E-value=0.15 Score=51.25 Aligned_cols=74 Identities=15% Similarity=0.223 Sum_probs=59.9
Q ss_pred CCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEE-cCCChhHHHHhh-CCccEEEEcCCCC
Q 018382 181 GLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYL-VSSDATRMQEAA-DSLDYIIDTVPAN 255 (357)
Q Consensus 181 ~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~-~~~d~v~d~~g~~ 255 (357)
.++|+|.|.|.+|+..++.++..|.++++++.++++.+.+++ +|...++ |..+++.+++.. ..+|.++-+.++.
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~ 475 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAIDDP 475 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-cCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCH
Confidence 367999999999999999999999999999999999988877 7865432 455566666544 3799999888875
No 483
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.81 E-value=0.15 Score=40.21 Aligned_cols=92 Identities=20% Similarity=0.140 Sum_probs=54.1
Q ss_pred CCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc-------------------HHHH----HHHHhcCCcEEEcC--C-
Q 018382 181 GLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD-------------------KKRV----EAMEHLGADQYLVS--S- 233 (357)
Q Consensus 181 ~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~-------------------~~~~----~~~~~~g~~~vv~~--~- 233 (357)
..+|+|+|+|++|..++..+-..|+ ++++++... .|.+ .+.+..+..++... .
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 4689999999999999999988899 777776322 1222 22221222222111 1
Q ss_pred ChhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEE
Q 018382 234 DATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLI 272 (357)
Q Consensus 234 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 272 (357)
+.+...+...++|+||+|..+........+.++..++-+
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~ 120 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIPF 120 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-EE
T ss_pred ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCCE
Confidence 123344444689999999988633334445555555543
No 484
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.79 E-value=0.086 Score=46.90 Aligned_cols=103 Identities=18% Similarity=0.182 Sum_probs=63.8
Q ss_pred hhccCCCCCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHH-Hh-hCCccEEE
Q 018382 172 LSHFGLKQSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQ-EA-ADSLDYII 249 (357)
Q Consensus 172 l~~~~~~~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~-~~-~~~~d~v~ 249 (357)
+.... +.++.+||=+|+|. |..+..+++..+++|+.++.+++..+.+++......-+.....+... .. .+.||+|+
T Consensus 45 l~~l~-l~~~~~VLDiGcG~-G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~V~ 122 (263)
T PTZ00098 45 LSDIE-LNENSKVLDIGSGL-GGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDMIY 122 (263)
T ss_pred HHhCC-CCCCCEEEEEcCCC-ChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEEEE
Confidence 33443 38899999998753 45566677777889999999988877777644421111111111111 11 23699998
Q ss_pred Ec--C---C--C-CCChHHHHhccccCCeEEEEcc
Q 018382 250 DT--V---P--A-NHPLEPYLSLLKLDGKLILTGV 276 (357)
Q Consensus 250 d~--~---g--~-~~~~~~~~~~l~~~G~~v~~g~ 276 (357)
.. . + . ...++.+.+.|+|+|+++....
T Consensus 123 s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 123 SRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred EhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 52 1 1 1 1245677899999999987654
No 485
>PLN00015 protochlorophyllide reductase
Probab=94.77 E-value=0.13 Score=46.78 Aligned_cols=70 Identities=19% Similarity=0.185 Sum_probs=49.2
Q ss_pred EEEec-ChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCC---c---EEEcCCChhHHHHh----h---CCccEEE
Q 018382 185 GILGL-GGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGA---D---QYLVSSDATRMQEA----A---DSLDYII 249 (357)
Q Consensus 185 lI~G~-g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~---~---~vv~~~~~~~~~~~----~---~~~d~v~ 249 (357)
||+|+ +++|.++++.+...| ++|+++++++++.+.+.+.++. . ..+|..+.+.++++ . +++|+++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 57887 999999888888889 8999999988776655554431 1 12466565443332 2 3689999
Q ss_pred EcCCC
Q 018382 250 DTVPA 254 (357)
Q Consensus 250 d~~g~ 254 (357)
+++|.
T Consensus 81 nnAG~ 85 (308)
T PLN00015 81 CNAAV 85 (308)
T ss_pred ECCCc
Confidence 98874
No 486
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=94.72 E-value=0.39 Score=38.64 Aligned_cols=96 Identities=15% Similarity=0.183 Sum_probs=57.2
Q ss_pred eEEEEecChHHHHHHHHHHH-cCCeEEEEeC--CcHHHHHHHH---hcC---CcE-------EEc--------CCChhHH
Q 018382 183 RGGILGLGGVGHMGVLIAKA-MGHHVTVISS--SDKKRVEAME---HLG---ADQ-------YLV--------SSDATRM 238 (357)
Q Consensus 183 ~VlI~G~g~~G~~ai~la~~-~g~~V~~~~~--~~~~~~~~~~---~~g---~~~-------vv~--------~~~~~~~ 238 (357)
+|.|+|.|.+|...++.+.. .+.+++++.. +.+....+.+ -.| .+. +++ .+++..+
T Consensus 2 kv~I~G~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~~ 81 (149)
T smart00846 2 KVGINGFGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPANL 81 (149)
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHHC
Confidence 57889999999998888774 4567776554 2233333333 122 110 111 1222222
Q ss_pred HHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 239 QEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
.+...++|+|+||+|.....+.+...+..+-+-|.++.+.
T Consensus 82 ~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~ 121 (149)
T smart00846 82 PWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPA 121 (149)
T ss_pred cccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCC
Confidence 2223479999999988645556667788776777776654
No 487
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=94.70 E-value=0.53 Score=40.47 Aligned_cols=37 Identities=30% Similarity=0.332 Sum_probs=31.0
Q ss_pred CCCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcH
Q 018382 179 QSGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDK 215 (357)
Q Consensus 179 ~~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~ 215 (357)
-.|.+|+|.|.|.+|..+++++...|++|+.++.+..
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 3688999999999999999999999997666655444
No 488
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=94.69 E-value=0.24 Score=42.72 Aligned_cols=99 Identities=16% Similarity=0.207 Sum_probs=57.8
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc------HH-HHHHHHhcCC----------------cEEE---cC
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD------KK-RVEAMEHLGA----------------DQYL---VS 232 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~------~~-~~~~~~~~g~----------------~~vv---~~ 232 (357)
+...|+|+|.|++|.+++..+-..|+ ++.+++..+ .| ...+....|. -++- +.
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 35789999999999999999999998 777765322 11 1111111221 1111 11
Q ss_pred CChhHHHHhhC-CccEEEEcCCCCCCh-HHHHhccccCCeEEEEccCC
Q 018382 233 SDATRMQEAAD-SLDYIIDTVPANHPL-EPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 233 ~~~~~~~~~~~-~~d~v~d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 278 (357)
-.++.++++.. ++|+|+||..+-..- ..+..|.+.+=.++..+...
T Consensus 109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag 156 (263)
T COG1179 109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG 156 (263)
T ss_pred hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence 12344444443 799999999886332 23334555555666665543
No 489
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=94.69 E-value=0.093 Score=47.63 Aligned_cols=93 Identities=19% Similarity=0.154 Sum_probs=67.9
Q ss_pred eEEEEec-ChHHHHHHHHHHH----cCCeEEEEeCCcHHHHHHHHhcCCc----------EEEcCCChhHHHHhhCCccE
Q 018382 183 RGGILGL-GGVGHMGVLIAKA----MGHHVTVISSSDKKRVEAMEHLGAD----------QYLVSSDATRMQEAADSLDY 247 (357)
Q Consensus 183 ~VlI~G~-g~~G~~ai~la~~----~g~~V~~~~~~~~~~~~~~~~~g~~----------~vv~~~~~~~~~~~~~~~d~ 247 (357)
-++|.|| |-+|...+.-+.. -+...-+..|+++|+++..+..+.. .+.|..+++.+.++.....+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v 86 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV 86 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence 3678898 8999998888876 4678889999999998887766632 24677788888888889999
Q ss_pred EEEcCCCCCCh--HHHHhccccCCeEEEEc
Q 018382 248 IIDTVPANHPL--EPYLSLLKLDGKLILTG 275 (357)
Q Consensus 248 v~d~~g~~~~~--~~~~~~l~~~G~~v~~g 275 (357)
++||+|..... .....|+.+|-..+++.
T Consensus 87 ivN~vGPyR~hGE~VVkacienG~~~vDIS 116 (423)
T KOG2733|consen 87 IVNCVGPYRFHGEPVVKACIENGTHHVDIS 116 (423)
T ss_pred EEeccccceecCcHHHHHHHHcCCceeccC
Confidence 99999875221 12333444455566554
No 490
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.68 E-value=0.29 Score=43.57 Aligned_cols=97 Identities=16% Similarity=0.188 Sum_probs=72.2
Q ss_pred ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382 159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR 237 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~ 237 (357)
+.+||.....+..|+....--.|++|+|+|- ..+|.-++.++...|+.|++..+... .
T Consensus 136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~---------------------~ 194 (278)
T PRK14172 136 CFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTK---------------------N 194 (278)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCC---------------------C
Confidence 3567776666666766655458999999985 88999999999999999888653211 1
Q ss_pred HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
+++.....|+|+-++|.+..+ -.+.++++-.++++|...
T Consensus 195 l~~~~~~ADIvIsAvGkp~~i--~~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 195 LKEVCKKADILVVAIGRPKFI--DEEYVKEGAIVIDVGTSS 233 (278)
T ss_pred HHHHHhhCCEEEEcCCCcCcc--CHHHcCCCcEEEEeeccc
Confidence 334555689999999998543 346699999999998654
No 491
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=94.68 E-value=0.17 Score=45.93 Aligned_cols=89 Identities=25% Similarity=0.196 Sum_probs=56.5
Q ss_pred eEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEE-------EcCCChhHHHHhhCCccEEEEcCCCC
Q 018382 183 RGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQY-------LVSSDATRMQEAADSLDYIIDTVPAN 255 (357)
Q Consensus 183 ~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-------v~~~~~~~~~~~~~~~d~v~d~~g~~ 255 (357)
+|+|+|+|.+|.+.+..+...|.+|+.+++ +++.+.+.+ .|.... +.....+...+....+|++|-|+...
T Consensus 2 kI~IiG~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~~ 79 (305)
T PRK12921 2 RIAVVGAGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRE-RGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKAY 79 (305)
T ss_pred eEEEECCCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHh-CCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEeccc
Confidence 588999999999888888877999999998 666666665 553211 10000111122335799999988876
Q ss_pred CChHHHHhccc----cCCeEEEE
Q 018382 256 HPLEPYLSLLK----LDGKLILT 274 (357)
Q Consensus 256 ~~~~~~~~~l~----~~G~~v~~ 274 (357)
..+.+++.++ ++..++.+
T Consensus 80 -~~~~~~~~l~~~~~~~~~ii~~ 101 (305)
T PRK12921 80 -QLDAAIPDLKPLVGEDTVIIPL 101 (305)
T ss_pred -CHHHHHHHHHhhcCCCCEEEEe
Confidence 4555555443 34445444
No 492
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=94.67 E-value=0.3 Score=43.58 Aligned_cols=166 Identities=15% Similarity=0.132 Sum_probs=90.7
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhC--CccEEEEcCCCCCC
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAAD--SLDYIIDTVPANHP 257 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~--~~d~v~d~~g~~~~ 257 (357)
...+|+.+|+|-+|.-.+--++.+|.+|+++++-+..- ++.--...+++|.-|.+.++.+.. ..|+++--+-.- .
T Consensus 11 ~a~kvmLLGSGELGKEvaIe~QRLG~eViAVDrY~~AP--AmqVAhrs~Vi~MlD~~al~avv~rekPd~IVpEiEAI-~ 87 (394)
T COG0027 11 QATKVMLLGSGELGKEVAIEAQRLGVEVIAVDRYANAP--AMQVAHRSYVIDMLDGDALRAVVEREKPDYIVPEIEAI-A 87 (394)
T ss_pred CCeEEEEecCCccchHHHHHHHhcCCEEEEecCcCCCh--hhhhhhheeeeeccCHHHHHHHHHhhCCCeeeehhhhh-h
Confidence 34568889999999999999999999999999875542 222122467888888888887754 789887422221 2
Q ss_pred hHHHHhccccCCeEEEEccCCCC--cccchHHHhhccceEEEEeecCHHHHHHHHHHHHhc----CCCccE--------E
Q 018382 258 LEPYLSLLKLDGKLILTGVINTP--MQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREK----GVTSMI--------E 323 (357)
Q Consensus 258 ~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~----~l~~~i--------~ 323 (357)
...+.++=..+..+|-..-...- ..-.+..+-...+.+-.+...-...++++.+..++- .++|.. -
T Consensus 88 td~L~elE~~G~~VVP~ArAt~ltMnRegiRrlAAeeLglpTs~Y~fa~s~~e~~~a~~~iGfPcvvKPvMSSSGkGqsv 167 (394)
T COG0027 88 TDALVELEEEGYTVVPNARATKLTMNREGIRRLAAEELGLPTSKYRFADSLEELRAAVEKIGFPCVVKPVMSSSGKGQSV 167 (394)
T ss_pred HHHHHHHHhCCceEccchHHHHhhhcHHHHHHHHHHHhCCCCccccccccHHHHHHHHHHcCCCeecccccccCCCCcee
Confidence 23344444445555433211100 001111222222222111111112233444434432 222311 1
Q ss_pred EeecccHHHHHHHHHcCCcc--EEEEE
Q 018382 324 VIKMDYVNKAFERLEKNDVR--YRFVV 348 (357)
Q Consensus 324 ~~~~~~~~~a~~~~~~~~~~--Gkvvi 348 (357)
+-+.+++++||++.+++.-. |||++
T Consensus 168 v~~~e~ve~AW~~A~~g~R~~~~RVIV 194 (394)
T COG0027 168 VRSPEDVEKAWEYAQQGGRGGSGRVIV 194 (394)
T ss_pred ecCHHHHHHHHHHHHhcCCCCCCcEEE
Confidence 33578999999988755433 57765
No 493
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.67 E-value=0.7 Score=36.07 Aligned_cols=89 Identities=18% Similarity=0.320 Sum_probs=54.7
Q ss_pred EEEEec-ChHHHHHHHHHHHcC--CeEEEEeC--CcHHHHHHHHhcCCcEEEcCCChh--HHH-----------------
Q 018382 184 GGILGL-GGVGHMGVLIAKAMG--HHVTVISS--SDKKRVEAMEHLGADQYLVSSDAT--RMQ----------------- 239 (357)
Q Consensus 184 VlI~G~-g~~G~~ai~la~~~g--~~V~~~~~--~~~~~~~~~~~~g~~~vv~~~~~~--~~~----------------- 239 (357)
|.|+|+ |.+|..++++++... .+|+..+. +-+++....++|....++-.+... .++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 578898 999999999999887 57776653 333444444448877766544321 111
Q ss_pred ---Hhh--CCccEEEEcCCCCCChHHHHhccccCCeEE
Q 018382 240 ---EAA--DSLDYIIDTVPANHPLEPYLSLLKLDGKLI 272 (357)
Q Consensus 240 ---~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 272 (357)
++. ..+|+|+....+...+.-.+..++.+=++.
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia 118 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA 118 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence 111 268888887776656777777777664443
No 494
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.65 E-value=0.25 Score=44.02 Aligned_cols=96 Identities=17% Similarity=0.229 Sum_probs=72.2
Q ss_pred ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382 159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR 237 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~ 237 (357)
+.+||.....+..|+..+.--.|++|+|+|- ..+|.-++.++...|+.|++..+... .
T Consensus 137 ~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~---------------------~ 195 (284)
T PRK14177 137 TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQ---------------------N 195 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCC---------------------C
Confidence 4567766666666666655458999999996 89999999999999999988653211 1
Q ss_pred HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccC
Q 018382 238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVI 277 (357)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (357)
+++.....|+++-++|.+..+ -.+.++++-.++++|..
T Consensus 196 l~~~~~~ADIvIsAvGk~~~i--~~~~ik~gavVIDvGin 233 (284)
T PRK14177 196 LPSIVRQADIIVGAVGKPEFI--KADWISEGAVLLDAGYN 233 (284)
T ss_pred HHHHHhhCCEEEEeCCCcCcc--CHHHcCCCCEEEEecCc
Confidence 334456789999999998443 36789999999999874
No 495
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.65 E-value=0.21 Score=41.41 Aligned_cols=32 Identities=22% Similarity=0.396 Sum_probs=27.4
Q ss_pred eEEEEecChHHHHHHHHHHHcCC-eEEEEeCCc
Q 018382 183 RGGILGLGGVGHMGVLIAKAMGH-HVTVISSSD 214 (357)
Q Consensus 183 ~VlI~G~g~~G~~ai~la~~~g~-~V~~~~~~~ 214 (357)
+|+|+|+|++|...++.+...|. ++++++...
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 48999999999999999988999 688887654
No 496
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=94.65 E-value=0.26 Score=41.32 Aligned_cols=96 Identities=19% Similarity=0.177 Sum_probs=56.0
Q ss_pred cCCCCCCCeEEEEecChHHHHHHHHHHHcC-CeEEEEeCCcHHHHHHHHhcCCcEE-EcCCChhHHHH----hh-CCccE
Q 018382 175 FGLKQSGLRGGILGLGGVGHMGVLIAKAMG-HHVTVISSSDKKRVEAMEHLGADQY-LVSSDATRMQE----AA-DSLDY 247 (357)
Q Consensus 175 ~~~~~~~~~VlI~G~g~~G~~ai~la~~~g-~~V~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~----~~-~~~d~ 247 (357)
...++++++||.+|+|.-++......+..+ .+|++++.++.. ...+...+ .|..+...... .. +++|+
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~ 101 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKVDV 101 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCccE
Confidence 444588999999998765543333333323 489999988654 11233322 23333222222 22 36999
Q ss_pred EEE-cC----CC------------CCChHHHHhccccCCeEEEEc
Q 018382 248 IID-TV----PA------------NHPLEPYLSLLKLDGKLILTG 275 (357)
Q Consensus 248 v~d-~~----g~------------~~~~~~~~~~l~~~G~~v~~g 275 (357)
|+. .. |. ...++.+.+.|+++|+++...
T Consensus 102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 995 22 21 124566788999999998754
No 497
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=94.65 E-value=0.23 Score=41.58 Aligned_cols=113 Identities=18% Similarity=0.169 Sum_probs=75.5
Q ss_pred ccccchhhhhhhhhhccCC---------CCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcE
Q 018382 159 APLLCAGVTVFSPLSHFGL---------KQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQ 228 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~---------~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~ 228 (357)
+.+||.....+..|+..+. --.|++|+|+|- ..+|.=++.++...|+.|++...+.-.. ..+ .+.
T Consensus 31 ~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~~~-~~~-- 105 (197)
T cd01079 31 SILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--FTR-GES-- 105 (197)
T ss_pred CccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--ccc-ccc--
Confidence 4567766666666665532 257999999986 7899999999999999999875431111 111 110
Q ss_pred EEcCC-----C-hhHHHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 229 YLVSS-----D-ATRMQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 229 vv~~~-----~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
..++ + +..+.+....+|+|+-++|.+. +..-.+.++++-.++++|...
T Consensus 106 -~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~-~~i~~d~ik~GavVIDVGi~~ 159 (197)
T cd01079 106 -IRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPN-YKVPTELLKDGAICINFASIK 159 (197)
T ss_pred -cccccccccchhhHHHHHhhhCCEEEEccCCCC-CccCHHHcCCCcEEEEcCCCc
Confidence 0111 1 1124566678999999999984 323467899999999998653
No 498
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=94.64 E-value=0.2 Score=45.69 Aligned_cols=84 Identities=32% Similarity=0.410 Sum_probs=58.2
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCC----
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPAN---- 255 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~---- 255 (357)
.|++|.|+|.|.+|...+++++.+|++|+...++.... + .+... ..++++....|+|.-++.-.
T Consensus 144 ~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~~----~-~~~~~-------~~l~ell~~sDvv~lh~Plt~~T~ 211 (311)
T PRK08410 144 KGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKNK----N-EEYER-------VSLEELLKTSDIISIHAPLNEKTK 211 (311)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCcccc----c-cCcee-------ecHHHHhhcCCEEEEeCCCCchhh
Confidence 68899999999999999999999999999988753211 1 12111 12445555678887665432
Q ss_pred CCh-HHHHhccccCCeEEEEc
Q 018382 256 HPL-EPYLSLLKLDGKLILTG 275 (357)
Q Consensus 256 ~~~-~~~~~~l~~~G~~v~~g 275 (357)
..+ ...++.|+++..++.++
T Consensus 212 ~li~~~~~~~Mk~~a~lIN~a 232 (311)
T PRK08410 212 NLIAYKELKLLKDGAILINVG 232 (311)
T ss_pred cccCHHHHHhCCCCeEEEECC
Confidence 122 35778888888887763
No 499
>PRK06436 glycerate dehydrogenase; Provisional
Probab=94.63 E-value=0.17 Score=45.98 Aligned_cols=84 Identities=24% Similarity=0.359 Sum_probs=58.9
Q ss_pred CCCeEEEEecChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhHHHHhhCCccEEEEcCCCCC---
Q 018382 180 SGLRGGILGLGGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANH--- 256 (357)
Q Consensus 180 ~~~~VlI~G~g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~d~v~d~~g~~~--- 256 (357)
.|++|.|+|.|.+|..++++++.+|++|++..++... .+..... ..++++....|+|+.+.....
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~-------~~~~~~~-----~~l~ell~~aDiv~~~lp~t~~T~ 188 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN-------DGISSIY-----MEPEDIMKKSDFVLISLPLTDETR 188 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc-------cCccccc-----CCHHHHHhhCCEEEECCCCCchhh
Confidence 5899999999999999999999999999999876321 1222111 123445557888888776532
Q ss_pred -Ch-HHHHhccccCCeEEEEc
Q 018382 257 -PL-EPYLSLLKLDGKLILTG 275 (357)
Q Consensus 257 -~~-~~~~~~l~~~G~~v~~g 275 (357)
.+ ...++.|+++..++.++
T Consensus 189 ~li~~~~l~~mk~ga~lIN~s 209 (303)
T PRK06436 189 GMINSKMLSLFRKGLAIINVA 209 (303)
T ss_pred cCcCHHHHhcCCCCeEEEECC
Confidence 11 34677888887777764
No 500
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.63 E-value=0.34 Score=43.25 Aligned_cols=97 Identities=20% Similarity=0.190 Sum_probs=72.6
Q ss_pred ccccchhhhhhhhhhccCCCCCCCeEEEEec-ChHHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHhcCCcEEEcCCChhH
Q 018382 159 APLLCAGVTVFSPLSHFGLKQSGLRGGILGL-GGVGHMGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATR 237 (357)
Q Consensus 159 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~~G~~ai~la~~~g~~V~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~ 237 (357)
..+||........|+..+.--.|++|+|+|- ..+|.-++.++...|+.|++..+.. ..
T Consensus 136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t---------------------~~ 194 (284)
T PRK14190 136 TFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT---------------------KN 194 (284)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc---------------------hh
Confidence 3567776667777777665468999999996 8999999999999999999864321 12
Q ss_pred HHHhhCCccEEEEcCCCCCChHHHHhccccCCeEEEEccCC
Q 018382 238 MQEAADSLDYIIDTVPANHPLEPYLSLLKLDGKLILTGVIN 278 (357)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 278 (357)
+++.....|+|+-++|.+..+ -.+.++++..++++|...
T Consensus 195 l~~~~~~ADIvI~AvG~p~~i--~~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 195 LAELTKQADILIVAVGKPKLI--TADMVKEGAVVIDVGVNR 233 (284)
T ss_pred HHHHHHhCCEEEEecCCCCcC--CHHHcCCCCEEEEeeccc
Confidence 334455789999999988443 356788999999998753
Done!