Query 018383
Match_columns 357
No_of_seqs 192 out of 412
Neff 3.4
Searched_HMMs 29240
Date Mon Mar 25 14:24:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018383.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018383hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1irz_A ARR10-B; helix-turn-hel 100.0 2.6E-29 8.8E-34 193.5 6.3 62 13-75 1-62 (64)
2 2yum_A ZZZ3 protein, zinc fing 87.9 1.1 3.7E-05 33.7 5.8 57 15-74 4-63 (75)
3 2cu7_A KIAA1915 protein; nucle 85.5 1.8 6.3E-05 32.4 5.9 53 15-73 5-57 (72)
4 2yus_A SWI/SNF-related matrix- 83.1 2.2 7.7E-05 33.1 5.6 47 18-70 17-63 (79)
5 1x41_A Transcriptional adaptor 80.8 1.5 5.1E-05 31.9 3.6 51 15-71 4-55 (60)
6 2hzd_A Transcriptional enhance 80.7 2.4 8.1E-05 34.1 5.0 58 15-74 2-76 (82)
7 2xag_B REST corepressor 1; ami 79.8 2.6 9E-05 42.9 6.2 54 16-75 377-430 (482)
8 2iw5_B Protein corest, REST co 77.5 3.4 0.00012 38.8 5.8 56 13-74 127-182 (235)
9 2cqq_A RSGI RUH-037, DNAJ homo 76.9 3.1 0.00011 32.0 4.5 50 17-72 6-58 (72)
10 2elk_A SPCC24B10.08C protein; 62.2 7.4 0.00025 28.0 3.6 48 19-71 9-57 (58)
11 3sjm_A Telomeric repeat-bindin 61.8 19 0.00064 26.7 5.8 52 12-66 4-55 (64)
12 2d9a_A B-MYB, MYB-related prot 61.8 18 0.00061 25.8 5.5 51 14-69 3-53 (60)
13 2cqr_A RSGI RUH-043, DNAJ homo 61.7 14 0.00048 28.4 5.2 50 19-71 18-68 (73)
14 1ity_A TRF1; helix-turn-helix, 58.4 21 0.00073 26.2 5.6 52 15-70 6-58 (69)
15 2ba2_A D12_ORF131, hypothetica 55.4 45 0.0015 27.0 7.3 41 116-159 32-72 (85)
16 3uun_A Dystrophin; triple heli 51.8 48 0.0017 24.9 6.9 55 133-187 39-93 (119)
17 1guu_A C-MYB, MYB proto-oncoge 49.5 36 0.0012 23.4 5.3 46 19-69 3-48 (52)
18 2yqk_A Arginine-glutamic acid 49.5 15 0.00052 27.0 3.5 48 14-66 4-51 (63)
19 3uul_A Utrophin; spectrin repe 48.6 67 0.0023 24.2 7.2 54 134-187 40-93 (118)
20 1wgx_A KIAA1903 protein; MYB D 46.9 27 0.00092 27.1 4.7 49 21-72 10-59 (73)
21 1gvd_A MYB proto-oncogene prot 46.7 35 0.0012 23.5 4.9 46 19-69 3-48 (52)
22 2kes_A Synphilin-1; synphillin 45.8 19 0.00065 26.2 3.3 24 127-150 15-42 (48)
23 2rq5_A Protein jumonji; develo 44.2 8.1 0.00028 32.4 1.4 48 25-73 43-97 (121)
24 2lm1_A Lysine-specific demethy 42.6 8.3 0.00028 30.7 1.2 48 24-72 44-97 (107)
25 2eqr_A N-COR1, N-COR, nuclear 39.7 24 0.00083 25.6 3.2 46 15-66 8-53 (61)
26 1c20_A DEAD ringer protein; DN 39.2 10 0.00035 31.4 1.3 47 25-72 53-106 (128)
27 2dim_A Cell division cycle 5-l 39.1 76 0.0026 23.1 5.9 51 14-69 4-54 (70)
28 2cjj_A Radialis; plant develop 38.1 48 0.0016 26.5 5.0 48 19-71 8-58 (93)
29 2eqy_A RBP2 like, jumonji, at 37.6 12 0.00042 30.8 1.5 48 25-73 43-96 (122)
30 2cxy_A BAF250B subunit, HBAF25 37.0 11 0.00039 31.0 1.2 48 25-73 52-105 (125)
31 2jrz_A Histone demethylase jar 36.9 11 0.00038 30.8 1.2 48 25-73 41-94 (117)
32 1w0t_A Telomeric repeat bindin 36.0 75 0.0026 22.0 5.2 48 19-69 2-49 (53)
33 4eef_G F-HB80.4, designed hema 35.9 17 0.00057 28.8 1.9 53 12-67 13-66 (74)
34 2li6_A SWI/SNF chromatin-remod 34.2 12 0.0004 30.6 0.8 48 24-74 49-100 (116)
35 2jxj_A Histone demethylase jar 32.5 12 0.00042 29.2 0.7 46 25-71 37-88 (96)
36 1ig6_A MRF-2, modulator recogn 32.2 10 0.00035 30.3 0.2 50 24-74 33-89 (107)
37 2crg_A Metastasis associated p 29.4 48 0.0016 24.9 3.5 48 14-66 3-50 (70)
38 3ok8_A Brain-specific angiogen 28.3 90 0.0031 28.8 5.8 42 117-158 72-122 (222)
39 2kk0_A AT-rich interactive dom 27.2 23 0.00079 30.1 1.5 47 25-72 65-118 (145)
40 1kkx_A Transcription regulator 26.9 24 0.00082 29.3 1.5 47 25-74 49-99 (123)
41 2aje_A Telomere repeat-binding 20.6 1.7E+02 0.0059 23.9 5.5 50 15-67 9-60 (105)
42 1gv2_A C-MYB, MYB proto-oncoge 20.4 1.6E+02 0.0053 22.8 5.0 44 18-69 3-49 (105)
43 2din_A Cell division cycle 5-l 20.0 2.3E+02 0.0078 20.3 5.6 49 16-71 6-54 (66)
No 1
>1irz_A ARR10-B; helix-turn-helix, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.11
Probab=99.95 E-value=2.6e-29 Score=193.52 Aligned_cols=62 Identities=42% Similarity=0.792 Sum_probs=59.0
Q ss_pred ccCCCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhhhhcccc
Q 018383 13 STDAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQ 75 (357)
Q Consensus 13 S~~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKYRl~~~~ 75 (357)
|+++|||++||+|||++||+||++|| .++||||.||++|+|+|||++||||||||||+...+
T Consensus 1 ~~~~k~r~~WT~elH~~Fv~Av~~LG-~~~AtPk~Il~~M~v~gLT~~~VkSHLQKYR~~l~r 62 (64)
T 1irz_A 1 TAQKKPRVLWTHELHNKFLAAVDHLG-VERAVPKKILDLMNVDKLTRENVASHLQKFRVALKK 62 (64)
T ss_dssp CCCCCSSCSSCHHHHHHHHHHHHHHC-TTTCCHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHhC-CCCCCcHHHHHHcCCCCCCHHHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999 799999999999999999999999999999998654
No 2
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.93 E-value=1.1 Score=33.66 Aligned_cols=57 Identities=16% Similarity=0.274 Sum_probs=42.5
Q ss_pred CCCCccccChHHHHHHHHHHHHhCCCCCCCc---hhHHhhhCCCCccHHhHHHhhhhhhhccc
Q 018383 15 DAKPRLKWTPELHQRFVDAVNHLGGPDKATP---KSLMRVMGIPGLTLYHLKSHLQKYRLGKS 74 (357)
Q Consensus 15 ~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtP---K~IL~lM~v~GLT~~hVKSHLQKYRl~~~ 74 (357)
+...+-.||+|=+.+|++||..+| .+...| +.|-+.| +|=|-.+|+.|.++|-....
T Consensus 4 p~~~~~~WT~eEd~~L~~~v~~~g-~~~~~~~~W~~IA~~~--~~Rt~~qcr~r~~~~l~~~~ 63 (75)
T 2yum_A 4 GSSGNQLWTVEEQKKLEQLLIKYP-PEEVESRRWQKIADEL--GNRTAKQVASQVQKYFIKLT 63 (75)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHSC-CCSCHHHHHHHHHHHH--SSSCHHHHHHHHHHHHGGGS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhC-CCCCCcccHHHHHHHh--CCCCHHHHHHHHHHHHHHHH
Confidence 445566899999999999999999 222222 3455554 68999999999999976543
No 3
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=85.49 E-value=1.8 Score=32.38 Aligned_cols=53 Identities=23% Similarity=0.337 Sum_probs=42.4
Q ss_pred CCCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhhhhcc
Q 018383 15 DAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGK 73 (357)
Q Consensus 15 ~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKYRl~~ 73 (357)
+...+-.||+|=++.|+++|..+|- .=..|-+. ++|=|-.+|+.|.++|-...
T Consensus 5 p~~~~~~WT~eEd~~l~~~~~~~G~----~W~~Ia~~--~~~Rt~~q~k~r~~~~l~~~ 57 (72)
T 2cu7_A 5 SSGYSVKWTIEEKELFEQGLAKFGR----RWTKISKL--IGSRTVLQVKSYARQYFKNK 57 (72)
T ss_dssp CSSCCCCCCHHHHHHHHHHHHHTCS----CHHHHHHH--HSSSCHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHCc----CHHHHHHH--cCCCCHHHHHHHHHHHHHHH
Confidence 4456778999999999999999993 33566665 47899999999999885543
No 4
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=83.06 E-value=2.2 Score=33.11 Aligned_cols=47 Identities=13% Similarity=0.144 Sum_probs=39.0
Q ss_pred CccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhhh
Q 018383 18 PRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR 70 (357)
Q Consensus 18 pRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKYR 70 (357)
.+-.||+|=+.+|++||..+|+- =+.|-+.|+ +=|..+++.|.++|-
T Consensus 17 ~~~~WT~eEd~~Ll~~v~~~G~~----W~~IA~~v~--~RT~~qcr~r~~~~~ 63 (79)
T 2yus_A 17 AGREWTEQETLLLLEALEMYKDD----WNKVSEHVG--SRTQDECILHFLRLP 63 (79)
T ss_dssp CSCCCCHHHHHHHHHHHHHSSSC----HHHHHHHHS--SCCHHHHHHHHTTSC
T ss_pred cCCCcCHHHHHHHHHHHHHhCCC----HHHHHHHcC--CCCHHHHHHHHHHhc
Confidence 36789999999999999999942 367777764 789999999999773
No 5
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=80.76 E-value=1.5 Score=31.86 Aligned_cols=51 Identities=22% Similarity=0.242 Sum_probs=40.5
Q ss_pred CCCCccccChHHHHHHHHHHHHhC-CCCCCCchhHHhhhCCCCccHHhHHHhhhhhhh
Q 018383 15 DAKPRLKWTPELHQRFVDAVNHLG-GPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 71 (357)
Q Consensus 15 ~~KpRlrWT~ELH~rFV~AV~qLG-G~dkAtPK~IL~lM~v~GLT~~hVKSHLQKYRl 71 (357)
..-.|-.||+|=..+|++||..+| +- =+.|-+.| +|=|-.+++.|.++|-.
T Consensus 4 ~~~~~~~WT~eED~~L~~~v~~~G~~~----W~~Ia~~~--~~Rt~~qcr~r~~~~l~ 55 (60)
T 1x41_A 4 GSSGDPSWTAQEEMALLEAVMDCGFGN----WQDVANQM--CTKTKEECEKHYMKYFS 55 (60)
T ss_dssp CCCCCSSSCHHHHHHHHHHHHHTCTTC----HHHHHHHH--TTSCHHHHHHHHHHHTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCcCc----HHHHHHHh--CCCCHHHHHHHHHHHcc
Confidence 455667899999999999999999 32 35666666 67899999999887754
No 6
>2hzd_A Transcriptional enhancer factor TEF-1; DNA-binding, helix-turn-helix, gene regulation; NMR {Homo sapiens}
Probab=80.67 E-value=2.4 Score=34.07 Aligned_cols=58 Identities=26% Similarity=0.355 Sum_probs=36.7
Q ss_pred CCCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhh---h-C-----------C--CCccHHhHHHhhhhhhhccc
Q 018383 15 DAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRV---M-G-----------I--PGLTLYHLKSHLQKYRLGKS 74 (357)
Q Consensus 15 ~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~l---M-~-----------v--~GLT~~hVKSHLQKYRl~~~ 74 (357)
|++..-+|.++|-..|++|+...--.... |-+|.. | | . +-=|..+|.||||.-+-.+.
T Consensus 2 d~~~e~vW~~~lE~aF~eaL~~yp~~g~~--k~~ls~~gk~~gRNelIs~yI~~~tGk~RtrKQVSShiQvlk~~~~ 76 (82)
T 2hzd_A 2 DNDAEGVWSPDIEQSFQEALSIYPPCGRR--KIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKS 76 (82)
T ss_dssp CGGGSCCSCHHHHHHHHHHHHHSCSSSCC--CCCHHHHCCCCCTHHHHHHHHHHHHSCCCCSHHHHHHHHHHHHHHT
T ss_pred CCCcCCcCCHHHHHHHHHHHHHcCCCCcc--ceeecccccccchhHHHHHHHHHHHcccCCccchhHHHHHHHHHHh
Confidence 45667789999999999999977511122 222311 1 1 1 22366789999997665443
No 7
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=79.82 E-value=2.6 Score=42.95 Aligned_cols=54 Identities=22% Similarity=0.333 Sum_probs=44.6
Q ss_pred CCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhhhhcccc
Q 018383 16 AKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQ 75 (357)
Q Consensus 16 ~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKYRl~~~~ 75 (357)
.+-.-+||++=|..|++|+...|- .=+.|-+.++- =|..+|++|.++||.....
T Consensus 377 ~~~~~~WT~eE~~~f~~al~~yGk----dw~~IA~~VgT--KT~~Qvk~fy~~~kkr~~l 430 (482)
T 2xag_B 377 QKCNARWTTEEQLLAVQAIRKYGR----DFQAISDVIGN--KSVVQVKNFFVNYRRRFNI 430 (482)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHHTT----CHHHHHHHHSS--CCHHHHHHHHHHTTTTTTH
T ss_pred cccCCCCCHHHHHHHHHHHHHHCc----CHHHHHHHhCC--CCHHHHHHHHHHHHHHhCh
Confidence 455789999999999999999983 35677777665 4999999999999886554
No 8
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=77.54 E-value=3.4 Score=38.76 Aligned_cols=56 Identities=21% Similarity=0.286 Sum_probs=45.4
Q ss_pred ccCCCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhhhhccc
Q 018383 13 STDAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKS 74 (357)
Q Consensus 13 S~~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKYRl~~~ 74 (357)
.+..+..-+||+|=+..|++|+...|-- =..|-++ |++=|..+|++|..+||....
T Consensus 127 e~~~k~s~~WTeEE~~lFleAl~kYGKD----W~~IAk~--VgTKT~~QcKnfY~~~kKRln 182 (235)
T 2iw5_B 127 EVIQKCNARWTTEEQLLAVQAIRKYGRD----FQAISDV--IGNKSVVQVKNFFVNYRRRFN 182 (235)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHSSC----HHHHHHH--HSSCCHHHHHHHHHHTTTTTT
T ss_pred CCCCccCCCCCHHHHHHHHHHHHHHCcC----HHHHHHH--cCCCCHHHHHHHHHHHHHHhh
Confidence 3445677899999999999999999932 4566666 578999999999999986544
No 9
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=76.87 E-value=3.1 Score=31.97 Aligned_cols=50 Identities=14% Similarity=0.309 Sum_probs=38.7
Q ss_pred CCccccChHHHHHHHHHHHHhCCCCCCCchh---HHhhhCCCCccHHhHHHhhhhhhhc
Q 018383 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKS---LMRVMGIPGLTLYHLKSHLQKYRLG 72 (357)
Q Consensus 17 KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~---IL~lM~v~GLT~~hVKSHLQKYRl~ 72 (357)
..+-.||.|=+.+|+.|+..+++ -||.+ |-..| |=|..+|+.|.+++.-.
T Consensus 6 ~~~~~WT~eE~k~fe~al~~~p~---~t~~RW~~IA~~l---gRt~~eV~~~y~~L~~d 58 (72)
T 2cqq_A 6 SGAPEWTEEDLSQLTRSMVKFPG---GTPGRWEKIAHEL---GRSVTDVTTKAKQLKDS 58 (72)
T ss_dssp CCCCCCCHHHHHHHHHHHHHSCT---TCTTHHHHHHHHH---TSCHHHHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCC---CCCcHHHHHHHHh---CCCHHHHHHHHHHHHHh
Confidence 34457999999999999999983 25654 55555 67999999998877544
No 10
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=62.24 E-value=7.4 Score=28.04 Aligned_cols=48 Identities=21% Similarity=0.298 Sum_probs=36.5
Q ss_pred ccccChHHHHHHHHHHHHhC-CCCCCCchhHHhhhCCCCccHHhHHHhhhhhhh
Q 018383 19 RLKWTPELHQRFVDAVNHLG-GPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 71 (357)
Q Consensus 19 RlrWT~ELH~rFV~AV~qLG-G~dkAtPK~IL~lM~v~GLT~~hVKSHLQKYRl 71 (357)
+-.||++=..++++||...| +- =+.|-+.|+. |=|-.+++.|.++|-+
T Consensus 9 ~~~WT~eED~~L~~~v~~~G~~~----W~~IA~~~~~-~Rt~~qcr~r~~~~~~ 57 (58)
T 2elk_A 9 DENWGADEELLLIDACETLGLGN----WADIADYVGN-ARTKEECRDHYLKTYI 57 (58)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTTC----HHHHHHHHCS-SCCHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHHCcCC----HHHHHHHHCC-CCCHHHHHHHHHHHcc
Confidence 45799999999999999999 32 3556666542 6788888888887643
No 11
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=61.79 E-value=19 Score=26.70 Aligned_cols=52 Identities=17% Similarity=0.231 Sum_probs=35.5
Q ss_pred eccCCCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhh
Q 018383 12 LSTDAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHL 66 (357)
Q Consensus 12 lS~~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHL 66 (357)
+++....|-.||+|=-++++++|..+|. . .=+.|.+.+++.|=|-.+++-+-
T Consensus 4 ~~~~~~kk~~WT~eED~~L~~~V~~~G~-~--~W~~Ia~~~~~~~Rt~~qcr~Rw 55 (64)
T 3sjm_A 4 MTTNITKKQKWTVEESEWVKAGVQKYGE-G--NWAAISKNYPFVNRTAVMIKDRW 55 (64)
T ss_dssp ------CCCCCCHHHHHHHHHHHHHHCT-T--CHHHHHHHSCCSSCCHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHccCC-C--chHHHHhhcCCCCCCHHHHHHHH
Confidence 4556667889999999999999999992 1 24567777777777777776443
No 12
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=61.78 E-value=18 Score=25.77 Aligned_cols=51 Identities=20% Similarity=0.268 Sum_probs=37.7
Q ss_pred cCCCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhh
Q 018383 14 TDAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKY 69 (357)
Q Consensus 14 ~~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKY 69 (357)
.+...|-.||+|=.++++++|.++|- . .=..|-+.| +|=|-.+++.|..+|
T Consensus 3 ~p~~~k~~Wt~eED~~L~~~v~~~G~-~--~W~~Ia~~~--~~Rt~~qcr~Rw~~~ 53 (60)
T 2d9a_A 3 SGSSGKVKWTHEEDEQLRALVRQFGQ-Q--DWKFLASHF--PNRTDQQCQYRWLRV 53 (60)
T ss_dssp SCCCCCSCCCHHHHHHHHHHHHHTCT-T--CHHHHHHHC--SSSCHHHHHHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCC-C--CHHHHHHHc--cCCCHHHHHHHHHHH
Confidence 35667889999999999999999992 1 124555554 677888888777665
No 13
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=61.67 E-value=14 Score=28.35 Aligned_cols=50 Identities=8% Similarity=0.101 Sum_probs=38.8
Q ss_pred ccccChHHHHHHHHHHHHhCCCCCCCchhHHhhh-CCCCccHHhHHHhhhhhhh
Q 018383 19 RLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVM-GIPGLTLYHLKSHLQKYRL 71 (357)
Q Consensus 19 RlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM-~v~GLT~~hVKSHLQKYRl 71 (357)
+-.||++=...|+.||..+|. -+|..--++= -|||=|-.+|+.|.+.+.-
T Consensus 18 ~~~WT~eEd~~L~~al~~~g~---~~~~rW~~IA~~vpGRT~~qcr~Ry~~L~~ 68 (73)
T 2cqr_A 18 EEPWTQNQQKLLELALQQYPR---GSSDCWDKIARCVPSKSKEDCIARYKLLVS 68 (73)
T ss_dssp SCCCCHHHHHHHHHHHHHSCS---SSHHHHHHHGGGCSSSCHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHcCC---CCCchHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 346999999999999999982 2676554332 3579999999999987643
No 14
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=58.40 E-value=21 Score=26.20 Aligned_cols=52 Identities=19% Similarity=0.259 Sum_probs=40.3
Q ss_pred CCCCccccChHHHHHHHHHHHHhC-CCCCCCchhHHhhhCCCCccHHhHHHhhhhhh
Q 018383 15 DAKPRLKWTPELHQRFVDAVNHLG-GPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR 70 (357)
Q Consensus 15 ~~KpRlrWT~ELH~rFV~AV~qLG-G~dkAtPK~IL~lM~v~GLT~~hVKSHLQKYR 70 (357)
..++|-.||+|=-...+++|..+| | .=+.|...|+..|=|-.+++-+-..|-
T Consensus 6 ~~~~r~~WT~eED~~L~~~v~~~G~~----~W~~Ia~~~~~~~Rt~~qcr~Rw~~~l 58 (69)
T 1ity_A 6 RARKRQAWLWEEDKNLRSGVRKYGEG----NWSKILLHYKFNNRTSVMLKDRWRTMK 58 (69)
T ss_dssp CSSSCCCCCHHHHHHHHHHHHHHCSS----CHHHHHHHSCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCC----cHHHHHHHcCcCCCCHHHHHHHHHHHc
Confidence 467788999999999999999999 3 236777777654778888877666553
No 15
>2ba2_A D12_ORF131, hypothetical UPF0134 protein MPN010; DUF16, hypothetical protein, coiled-coil, stutter, structural genomics, PSI; 1.80A {Mycoplasma pneumoniae} SCOP: h.1.30.1
Probab=55.40 E-value=45 Score=27.01 Aligned_cols=41 Identities=34% Similarity=0.400 Sum_probs=30.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 018383 116 LQIAQALQVQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQSVLKK 159 (357)
Q Consensus 116 ~qi~EALr~QmEVQrrLhEQLEVQRhLQLRIEAQGKYLqsiLEK 159 (357)
..|.+.+..|=|-=+.--||+ +.||+-+.|||+-|+.||+-
T Consensus 32 ~kie~~~~~QgEqI~~qGeqI---keLq~eqkaQg~tl~lil~t 72 (85)
T 2ba2_A 32 TVVMESFAVQNQNIDAQGEQI---KELQVEQKAQGKTLQLILEA 72 (85)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 456777777765444444454 88999999999999999983
No 16
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=51.80 E-value=48 Score=24.91 Aligned_cols=55 Identities=11% Similarity=0.128 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCCCCCchhhhhHHHHHHHHHh
Q 018383 133 HEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYSSSSAGVELAKAELSQLVSM 187 (357)
Q Consensus 133 hEQLEVQRhLQLRIEAQGKYLqsiLEKAqe~La~~~~~s~gieaakaeLseL~s~ 187 (357)
..||+-++.|+--|+++..-+.+|.+.|++-+.....++.....-+..+.+|...
T Consensus 39 ~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~i~~~l~~l~~r 93 (119)
T 3uun_A 39 KDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSR 93 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 3444555667777789999999999999988775444433333334455555443
No 17
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=49.54 E-value=36 Score=23.38 Aligned_cols=46 Identities=22% Similarity=0.313 Sum_probs=35.2
Q ss_pred ccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhh
Q 018383 19 RLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKY 69 (357)
Q Consensus 19 RlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKY 69 (357)
|-.||+|=..+++++|..+|. ..=+.|-+.| +|=|-.+++.|..+|
T Consensus 3 ~~~Wt~eED~~L~~~v~~~G~---~~W~~Ia~~~--~~Rt~~qcr~Rw~~~ 48 (52)
T 1guu_A 3 KTRWTREEDEKLKKLVEQNGT---DDWKVIANYL--PNRTDVQCQHRWQKV 48 (52)
T ss_dssp CCCCCHHHHHHHHHHHHHHCS---SCHHHHHHTS--TTCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCC---CCHHHHHHHc--CCCCHHHHHHHHHHH
Confidence 568999999999999999983 1235666654 577888888877665
No 18
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.50 E-value=15 Score=27.03 Aligned_cols=48 Identities=17% Similarity=0.275 Sum_probs=32.2
Q ss_pred cCCCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhh
Q 018383 14 TDAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHL 66 (357)
Q Consensus 14 ~~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHL 66 (357)
.+...+-.||+|=|..|.+|+...|= + =..|-+.| |+.=|..+|..+.
T Consensus 4 ~p~~~~~~WT~eE~~~Fe~~l~~yGK-d---f~~I~~~~-v~~Kt~~~~v~fY 51 (63)
T 2yqk_A 4 GSSGIEKCWTEDEVKRFVKGLRQYGK-N---FFRIRKEL-LPNKETGELITFY 51 (63)
T ss_dssp CCCCCCCSCCHHHHHHHHHHHHHTCS-C---HHHHHHHS-CTTSCHHHHHHHH
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHhCc-c---HHHHHHHH-cCCCcHHHHHHHH
Confidence 34555679999999999999999992 1 23333311 5666777765444
No 19
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=48.59 E-value=67 Score=24.24 Aligned_cols=54 Identities=15% Similarity=0.169 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCCCCCchhhhhHHHHHHHHHh
Q 018383 134 EQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYSSSSAGVELAKAELSQLVSM 187 (357)
Q Consensus 134 EQLEVQRhLQLRIEAQGKYLqsiLEKAqe~La~~~~~s~gieaakaeLseL~s~ 187 (357)
.||.-++.|+--|.++..-+..|.+.|++.+.....++.....-+..|.+|...
T Consensus 40 ~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~i~~~l~~l~~r 93 (118)
T 3uul_A 40 EQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFEIQEQMTLLNAR 93 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHH
Confidence 344455667777789999999999999988765444443333445556665544
No 20
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=46.92 E-value=27 Score=27.14 Aligned_cols=49 Identities=16% Similarity=0.175 Sum_probs=38.3
Q ss_pred ccChHHHHHHHHHHHHhCCCCCCCchhHHhhh-CCCCccHHhHHHhhhhhhhc
Q 018383 21 KWTPELHQRFVDAVNHLGGPDKATPKSLMRVM-GIPGLTLYHLKSHLQKYRLG 72 (357)
Q Consensus 21 rWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM-~v~GLT~~hVKSHLQKYRl~ 72 (357)
.||.+=..+|..|+..++ +.||-+--++- -|+|=|.+.|+.|.....-+
T Consensus 10 ~WT~eE~k~fe~ALa~~~---~~tp~rWe~IA~~V~gKT~eE~~~hY~~l~~~ 59 (73)
T 1wgx_A 10 EWNEKELQKLHCAFASLP---KHKPGFWSEVAAAVGSRSPEECQRKYMENPRG 59 (73)
T ss_dssp CCCHHHHHHHHHHHHHSC---SSSSSHHHHHHHHTTTSCHHHHHHHHHHSSSS
T ss_pred CCCHHHHHHHHHHHHHCC---CCCccHHHHHHHHcCCCCHHHHHHHHHHHHhc
Confidence 599999999999999986 34787665433 36889999999888766433
No 21
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=46.68 E-value=35 Score=23.52 Aligned_cols=46 Identities=17% Similarity=0.251 Sum_probs=33.9
Q ss_pred ccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhh
Q 018383 19 RLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKY 69 (357)
Q Consensus 19 RlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKY 69 (357)
+-.||+|=..+++++|.++|.. .=..|-+.| +|=|-.+++.|...|
T Consensus 3 k~~Wt~eED~~L~~~v~~~G~~---~W~~Ia~~~--~~Rt~~qcr~Rw~~~ 48 (52)
T 1gvd_A 3 KGPWTKEEDQRLIKLVQKYGPK---RWSVIAKHL--KGRIGKQCRERWHNH 48 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTT---CHHHHHTTS--TTCCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHCcC---hHHHHHHHc--CCCCHHHHHHHHHHH
Confidence 4579999999999999999921 123455544 677888888777665
No 22
>2kes_A Synphilin-1; synphillin, coiled-coil, ANK repeat, disease mutation, parki disease, phosphoprotein, polymorphism, UBL conjugation, Pro binding; NMR {Homo sapiens}
Probab=45.82 E-value=19 Score=26.19 Aligned_cols=24 Identities=38% Similarity=0.548 Sum_probs=17.4
Q ss_pred HHHHHHHHH----HHHHHHHHHHHHHHh
Q 018383 127 EVQRKLHEQ----IEVQRHLQLRIEAQG 150 (357)
Q Consensus 127 EVQrrLhEQ----LEVQRhLQLRIEAQG 150 (357)
.+=|.|+|| +.+|.+||.-+|+|.
T Consensus 15 kltkql~eqt~~rv~lq~qlq~lle~~k 42 (48)
T 2kes_A 15 KLTKQLKEQTVERVTLQNQLQQFLEAQK 42 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 455677777 567888888888773
No 23
>2rq5_A Protein jumonji; developmental protein, nucleus, repressor, transcription, transcription regulation; NMR {Mus musculus}
Probab=44.22 E-value=8.1 Score=32.35 Aligned_cols=48 Identities=27% Similarity=0.423 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCc----hhHHhhhCCCCcc---HHhHHHhhhhhhhcc
Q 018383 25 ELHQRFVDAVNHLGGPDKATP----KSLMRVMGIPGLT---LYHLKSHLQKYRLGK 73 (357)
Q Consensus 25 ELH~rFV~AV~qLGG~dkAtP----K~IL~lM~v~GLT---~~hVKSHLQKYRl~~ 73 (357)
+|+.-|. +|..+||.++.|- +.|...||+|... .+.++.|..||=+..
T Consensus 43 DL~~Ly~-~V~~~GG~~~Vt~~k~W~~Va~~lg~p~~~~sa~~~Lr~~Y~k~L~~Y 97 (121)
T 2rq5_A 43 DLACFFR-LINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSY 97 (121)
T ss_dssp CHHHHHH-HHHHTTSHHHHHHTTCHHHHHHHTCCCTTCSSHHHHHHHHHHTTHHHH
T ss_pred cHHHHHH-HHHHcCcHHHhcccCcHHHHHHHhCCCCCcCcHHHHHHHHHHHHhHHH
Confidence 6776664 7788999877665 4677889987543 467889888886653
No 24
>2lm1_A Lysine-specific demethylase LID; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Drosophila melanogaster}
Probab=42.56 E-value=8.3 Score=30.71 Aligned_cols=48 Identities=21% Similarity=0.185 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHHHhCCCCCCCc----hhHHhhhCCCCcc--HHhHHHhhhhhhhc
Q 018383 24 PELHQRFVDAVNHLGGPDKATP----KSLMRVMGIPGLT--LYHLKSHLQKYRLG 72 (357)
Q Consensus 24 ~ELH~rFV~AV~qLGG~dkAtP----K~IL~lM~v~GLT--~~hVKSHLQKYRl~ 72 (357)
-+||.-|.. |..+||.++.+- +.|.+.||+|.-| ...++.|..||=+.
T Consensus 44 vdL~~Ly~~-V~~~GG~~~V~~~~~W~~va~~lg~~~~~~~~~~lk~~Y~k~L~~ 97 (107)
T 2lm1_A 44 LDLYTLHRI-VQEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATLKAHYERILHP 97 (107)
T ss_dssp CCHHHHHHH-HHHHTCHHHHHHHTTHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ecHHHHHHH-HHHhcCHHHhcccCcHHHHHHHhCCCCCCcHHHHHHHHHHHHhHH
Confidence 378888875 778999877654 4678889997533 35688888888543
No 25
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.69 E-value=24 Score=25.59 Aligned_cols=46 Identities=11% Similarity=-0.003 Sum_probs=33.8
Q ss_pred CCCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhh
Q 018383 15 DAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHL 66 (357)
Q Consensus 15 ~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHL 66 (357)
.++..-.||++=|+.|++|+.+.|- + =..|-.. +|+=|..+|.-|.
T Consensus 8 ~r~~~~~WT~eE~~~F~~~~~~~gk--~--w~~Ia~~--l~~rt~~~~v~~Y 53 (61)
T 2eqr_A 8 DRQFMNVWTDHEKEIFKDKFIQHPK--N--FGLIASY--LERKSVPDCVLYY 53 (61)
T ss_dssp CCSCCCSCCHHHHHHHHHHHHHSTT--C--HHHHHHH--CTTSCHHHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHHHHHhCC--C--HHHHHHH--cCCCCHHHHHHHH
Confidence 4566789999999999999999982 2 2455444 5678888776553
No 26
>1c20_A DEAD ringer protein; DNA-binding domain, ARID, AT-rich interaction domain, DNA- binding protein; NMR {Drosophila melanogaster} SCOP: a.4.3.1 PDB: 1kqq_A
Probab=39.21 E-value=10 Score=31.40 Aligned_cols=47 Identities=19% Similarity=0.326 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCc----hhHHhhhCCCCc-c--HHhHHHhhhhhhhc
Q 018383 25 ELHQRFVDAVNHLGGPDKATP----KSLMRVMGIPGL-T--LYHLKSHLQKYRLG 72 (357)
Q Consensus 25 ELH~rFV~AV~qLGG~dkAtP----K~IL~lM~v~GL-T--~~hVKSHLQKYRl~ 72 (357)
+||.-|.. |..+||.++.+- +.|.+.||++.- | ...++.|..||=+.
T Consensus 53 DL~~Ly~~-V~~~GG~~~V~~~k~W~~Va~~lg~~~~~~sa~~~Lk~~Y~k~L~~ 106 (128)
T 1c20_A 53 DLYELYNL-VIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYP 106 (128)
T ss_dssp CHHHHHHH-HHHHTCHHHHHHHTTHHHHHHHTCCCSSCCSHHHHHHHHHHHHTHH
T ss_pred cHHHHHHH-HHHhcCHHHcCccCcHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHH
Confidence 78888875 789999877654 567888998752 2 46789988888554
No 27
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.06 E-value=76 Score=23.15 Aligned_cols=51 Identities=10% Similarity=0.091 Sum_probs=38.4
Q ss_pred cCCCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhh
Q 018383 14 TDAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKY 69 (357)
Q Consensus 14 ~~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKY 69 (357)
.+...|-.||+|=.++++++|..+|- ..=+.|-..|+ |=|-.+++-|-..|
T Consensus 4 ~~~~k~~~Wt~eED~~L~~~v~~~G~---~~W~~Ia~~l~--~Rt~~qcr~Rw~~~ 54 (70)
T 2dim_A 4 GSSGKGGVWRNTEDEILKAAVMKYGK---NQWSRIASLLH--RKSAKQCKARWYEW 54 (70)
T ss_dssp CSCSTTCCCCHHHHHHHHHHHHHTCS---SCHHHHHHHST--TCCHHHHHHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCc---CCHHHHHHHhc--CCCHHHHHHHHHHH
Confidence 34566778999999999999999991 12366666664 77888888777665
No 28
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=38.15 E-value=48 Score=26.52 Aligned_cols=48 Identities=23% Similarity=0.350 Sum_probs=37.6
Q ss_pred ccccChHHHHHHHHHHHHhCCCCCCCchh---HHhhhCCCCccHHhHHHhhhhhhh
Q 018383 19 RLKWTPELHQRFVDAVNHLGGPDKATPKS---LMRVMGIPGLTLYHLKSHLQKYRL 71 (357)
Q Consensus 19 RlrWT~ELH~rFV~AV~qLGG~dkAtPK~---IL~lM~v~GLT~~hVKSHLQKYRl 71 (357)
.-.||.|=...|+.|+..+|. + +|.+ |-.. |||=|-.+|+.|...+.-
T Consensus 8 ~~~WT~eEd~~L~~al~~~~~-~--~~~rW~~IA~~--vpGRT~~q~k~ry~~l~~ 58 (93)
T 2cjj_A 8 GRPWSAKENKAFERALAVYDK-D--TPDRWANVARA--VEGRTPEEVKKHYEILVE 58 (93)
T ss_dssp CCSCCHHHHHHHHHHHHHSCT-T--CTTHHHHHHHH--STTCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCC-C--CCchHHHHHHH--cCCCCHHHHHHHHHHHHH
Confidence 447999999999999999982 2 5654 4343 479999999999988753
No 29
>2eqy_A RBP2 like, jumonji, at rich interactive domain 1B; ARID domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=37.60 E-value=12 Score=30.81 Aligned_cols=48 Identities=19% Similarity=0.150 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCc----hhHHhhhCCCCcc--HHhHHHhhhhhhhcc
Q 018383 25 ELHQRFVDAVNHLGGPDKATP----KSLMRVMGIPGLT--LYHLKSHLQKYRLGK 73 (357)
Q Consensus 25 ELH~rFV~AV~qLGG~dkAtP----K~IL~lM~v~GLT--~~hVKSHLQKYRl~~ 73 (357)
+|+.-|. +|..+||.++.+- +.|.+.||++.-+ ...++.|..||=+..
T Consensus 43 DLy~Ly~-~V~~~GG~~~V~~~k~W~~V~~~lg~~~~~~~~~~Lr~~Y~k~L~~y 96 (122)
T 2eqy_A 43 DLFQLNK-LVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILNPY 96 (122)
T ss_dssp CHHHHHH-HHHHHTCHHHHHHTTTHHHHHHHTTCCSSSHHHHHHHHHHHHTHHHH
T ss_pred cHHHHHH-HHHHccCHHHHcCCCcHHHHHHHhCCCCCCcHHHHHHHHHHHHhHHH
Confidence 7888887 4889999877654 4678899997533 257888888886543
No 30
>2cxy_A BAF250B subunit, HBAF250B; DNA-binding domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Homo sapiens} PDB: 2eh9_A 1ryu_A
Probab=36.96 E-value=11 Score=31.04 Aligned_cols=48 Identities=19% Similarity=0.354 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCc----hhHHhhhCCCCcc--HHhHHHhhhhhhhcc
Q 018383 25 ELHQRFVDAVNHLGGPDKATP----KSLMRVMGIPGLT--LYHLKSHLQKYRLGK 73 (357)
Q Consensus 25 ELH~rFV~AV~qLGG~dkAtP----K~IL~lM~v~GLT--~~hVKSHLQKYRl~~ 73 (357)
+||.-|. +|..+||.++.+- +.|.+.||++.-| ...++.|..||=+..
T Consensus 52 DL~~Ly~-~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~s~~~~Lk~~Y~k~L~~y 105 (125)
T 2cxy_A 52 DLFRLYV-CVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAF 105 (125)
T ss_dssp CHHHHHH-HHHHHTSHHHHHHHTCHHHHHHHTTSCSSHHHHHHHHHHHHHHTHHH
T ss_pred cHHHHHH-HHHHcCCHHHhcccCcHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 7888887 4789999876653 4678899998643 356788888875543
No 31
>2jrz_A Histone demethylase jarid1C; bright/ARID domain, helical, structural genomics, structural genomics consortium, SGC, oxidoreductase; NMR {Homo sapiens} PDB: 2yqe_A
Probab=36.91 E-value=11 Score=30.79 Aligned_cols=48 Identities=17% Similarity=0.109 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCc----hhHHhhhCCCCcc--HHhHHHhhhhhhhcc
Q 018383 25 ELHQRFVDAVNHLGGPDKATP----KSLMRVMGIPGLT--LYHLKSHLQKYRLGK 73 (357)
Q Consensus 25 ELH~rFV~AV~qLGG~dkAtP----K~IL~lM~v~GLT--~~hVKSHLQKYRl~~ 73 (357)
+|+.-|. +|..+||.++.+- +.|.+.||++.-| ...++.|..||=+..
T Consensus 41 DL~~Ly~-~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~~a~~~Lk~~Y~k~L~~y 94 (117)
T 2jrz_A 41 DLYSLSK-IVVEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPY 94 (117)
T ss_dssp CHHHHHH-HHHHHTCHHHHHHTTTHHHHHHHTTCCTTCTHHHHHHHHHHHTTHHH
T ss_pred cHHHHHH-HHHHccCHHHhcccCcHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 7888887 4789999876654 4678899997433 356889888886543
No 32
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=36.04 E-value=75 Score=22.00 Aligned_cols=48 Identities=17% Similarity=0.182 Sum_probs=34.7
Q ss_pred ccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhh
Q 018383 19 RLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKY 69 (357)
Q Consensus 19 RlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKY 69 (357)
|-.||+|=.+..+++|...|. . .=+.|.+.|+..|=|-.+++-+-..|
T Consensus 2 r~~WT~eEd~~L~~~v~~~G~-~--~W~~Ia~~~~~~~Rt~~qcr~Rw~~~ 49 (53)
T 1w0t_A 2 RQAWLWEEDKNLRSGVRKYGE-G--NWSKILLHYKFNNRTSVMLKDRWRTM 49 (53)
T ss_dssp CCCCCHHHHHHHHHHHHHHCT-T--CHHHHHHHSCCSSCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCc-C--CHHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 558999999999999999992 1 23567777765466777776654443
No 33
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=35.91 E-value=17 Score=28.76 Aligned_cols=53 Identities=21% Similarity=0.288 Sum_probs=35.7
Q ss_pred eccCCCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhC-CCCccHHhHHHhhh
Q 018383 12 LSTDAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMG-IPGLTLYHLKSHLQ 67 (357)
Q Consensus 12 lS~~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~-v~GLT~~hVKSHLQ 67 (357)
++..+-.--.||.+=...|..|+...+ +-||.+--++-. |||=|...|+.|.|
T Consensus 13 m~s~~~ss~~WT~eE~K~FE~ALa~yp---~~tpdRWekIA~~VpGKT~eEVk~hY~ 66 (74)
T 4eef_G 13 MASTRGSGRPWKFSENIAFEIALSFTN---KDTPDRWKKVAQYVKGRTPEEVKKHYE 66 (74)
T ss_dssp ---------CCCTTHHHHHHHHTSSSC---SSCCSSSTTTGGGSCSSCHHHHHGGGC
T ss_pred eccCCCCCCCCCHHHHHHHHHHHHHCC---CCCCcHHHHHHHHcCCCCHHHHHHHHH
Confidence 333333345699999999999999875 457876544433 68999999999987
No 34
>2li6_A SWI/SNF chromatin-remodeling complex subunit SWI1; ligand binding, DNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=34.24 E-value=12 Score=30.58 Aligned_cols=48 Identities=21% Similarity=0.279 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHHhCCCCCCCc----hhHHhhhCCCCccHHhHHHhhhhhhhccc
Q 018383 24 PELHQRFVDAVNHLGGPDKATP----KSLMRVMGIPGLTLYHLKSHLQKYRLGKS 74 (357)
Q Consensus 24 ~ELH~rFV~AV~qLGG~dkAtP----K~IL~lM~v~GLT~~hVKSHLQKYRl~~~ 74 (357)
-+|+.-|. +|..+||.++.+. +.|.+.||++. -..++.|..||=+...
T Consensus 49 lDL~~Ly~-~V~~~GG~~~V~~~~~W~~Va~~lg~~~--~~~Lr~~Y~k~L~~yE 100 (116)
T 2li6_A 49 INLFYLYM-LVQKFGGADQVTRTQQWSMVAQRLQISD--YQQLESIYFRILLPYE 100 (116)
T ss_dssp CSTTHHHH-HHHHHTSHHHHHHTTCHHHHHHHHTSCC--TTHHHHHHHHHHSHHH
T ss_pred ecHHHHHH-HHHHhcCHHHccccCcHHHHHHHhCCCh--HHHHHHHHHHHHHHHH
Confidence 37888776 5789999877654 57789999988 6789999999866543
No 35
>2jxj_A Histone demethylase jarid1A; ARID domain, chromatin regulator, developmental protein, dioxygenase, iron, metal-binding, nucleus, oxidoreductase; NMR {Homo sapiens}
Probab=32.50 E-value=12 Score=29.16 Aligned_cols=46 Identities=22% Similarity=0.117 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCc----hhHHhhhCCCCcc--HHhHHHhhhhhhh
Q 018383 25 ELHQRFVDAVNHLGGPDKATP----KSLMRVMGIPGLT--LYHLKSHLQKYRL 71 (357)
Q Consensus 25 ELH~rFV~AV~qLGG~dkAtP----K~IL~lM~v~GLT--~~hVKSHLQKYRl 71 (357)
+|+.-|. +|..+||.++.+- +.|.+.|+++.-+ ...++.|..||=+
T Consensus 37 DL~~Ly~-~V~~~GG~~~V~~~~~W~~v~~~lg~~~~~~~~~~Lk~~Y~k~L~ 88 (96)
T 2jxj_A 37 DLYALSK-IVASKGGFEMVTKEKKWSKVGSRLGYLPGKGTGSLLKSHYERILY 88 (96)
T ss_dssp CCHHHHH-HHHHHHTTHHHHHHTTHHHHHHHHTCCSCSCHHHHHHHHHTTTTH
T ss_pred cHHHHHH-HHHHcCCHHHHccCCcHHHHHHHhCCCCcCcHHHHHHHHHHHHHH
Confidence 6777776 5789999877654 5678889986532 3567888877744
No 36
>1ig6_A MRF-2, modulator recognition factor 2; DNA binding protein, DNA-binding motif, protein-DNA interaction; NMR {Homo sapiens} SCOP: a.4.3.1 PDB: 2oeh_A
Probab=32.16 E-value=10 Score=30.32 Aligned_cols=50 Identities=24% Similarity=0.265 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHHHhCCCCCCCc----hhHHhhhCCCC-cc--HHhHHHhhhhhhhccc
Q 018383 24 PELHQRFVDAVNHLGGPDKATP----KSLMRVMGIPG-LT--LYHLKSHLQKYRLGKS 74 (357)
Q Consensus 24 ~ELH~rFV~AV~qLGG~dkAtP----K~IL~lM~v~G-LT--~~hVKSHLQKYRl~~~ 74 (357)
-+|+.-|. +|..+||.++.+- +.|.+.||++. .| -.+++.|..||=+...
T Consensus 33 lDL~~Ly~-~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~~s~~~~Lk~~Y~k~L~~yE 89 (107)
T 1ig6_A 33 INLWTMFQ-AAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYE 89 (107)
T ss_dssp CCHHHHHH-HHHHTTHHHHHHHHTTHHHHHHHHTCCTTCTTTTTTHHHHHHHHTTTTH
T ss_pred ecHHHHHH-HHHHhcCHHHhcccCcHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 47888887 4789999887664 46788899864 22 3678999998865543
No 37
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=29.38 E-value=48 Score=24.92 Aligned_cols=48 Identities=15% Similarity=0.196 Sum_probs=34.0
Q ss_pred cCCCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhh
Q 018383 14 TDAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHL 66 (357)
Q Consensus 14 ~~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHL 66 (357)
..++..-.||++=|..|.+|+...|= + =..|-+. -|++-|...|..+.
T Consensus 3 ~~r~~~~~WT~eE~~~Fe~~l~~yGK-d---f~~I~~~-~v~~Kt~~~~v~fY 50 (70)
T 2crg_A 3 SGSSGMEEWSASEACLFEEALEKYGK-D---FNDIRQD-FLPWKSLTSIIEYY 50 (70)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHHHTCS-C---HHHHHHT-TCSSSCHHHHHHHH
T ss_pred CcccCCCCCCHHHHHHHHHHHHHhCc-c---HHHHHHH-HcCCCCHHHHHHHH
Confidence 44567779999999999999999992 1 2333331 15777877777665
No 38
>3ok8_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 2; I-BAR, protein binding; 2.25A {Mus musculus}
Probab=28.34 E-value=90 Score=28.81 Aligned_cols=42 Identities=14% Similarity=0.334 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHhHHHHHHHH
Q 018383 117 QIAQALQVQMEVQRKLHEQIE---------VQRHLQLRIEAQGKYLQSVLK 158 (357)
Q Consensus 117 qi~EALr~QmEVQrrLhEQLE---------VQRhLQLRIEAQGKYLqsiLE 158 (357)
.|.+||.-=-|+||+|..+|| +-.+|+.+||.-.||++....
T Consensus 72 eLG~vL~qis~~hR~i~~~le~~~k~f~~elI~pLE~k~e~D~k~i~~~~K 122 (222)
T 3ok8_A 72 ILGEILVQMSDTQRHLNSDLEVVVQTFHGDLLQHMEKNTKLDMQFIKDSCQ 122 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777555588888888877 456899999999999985543
No 39
>2kk0_A AT-rich interactive domain-containing protein 3A; DEAD ringer, AT-rich interaction domain, NESG, ARID, cytopla binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=27.22 E-value=23 Score=30.06 Aligned_cols=47 Identities=21% Similarity=0.388 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCc----hhHHhhhCCCCc-c--HHhHHHhhhhhhhc
Q 018383 25 ELHQRFVDAVNHLGGPDKATP----KSLMRVMGIPGL-T--LYHLKSHLQKYRLG 72 (357)
Q Consensus 25 ELH~rFV~AV~qLGG~dkAtP----K~IL~lM~v~GL-T--~~hVKSHLQKYRl~ 72 (357)
+|+.-|.. |..+||.++.+- +.|.+.||++.- | .+.++.|..||=+.
T Consensus 65 DL~~Ly~~-V~~~GG~~~V~~~~~W~~Va~~lg~~~~~tsa~~~Lk~~Y~k~L~~ 118 (145)
T 2kk0_A 65 DLFMLYVL-VTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYP 118 (145)
T ss_dssp CHHHHHHH-HHHHTCHHHHHHHTCHHHHHHHTTCCTTSTTHHHHHHHHHHHHSSH
T ss_pred cHHHHHHH-HHHhCCHHHhcccCcHHHHHHHhCCCCCcCcHHHHHHHHHHHHHHH
Confidence 78887874 789999887654 567889998762 1 46788888888554
No 40
>1kkx_A Transcription regulatory protein ADR6; ARID, DNA-binding domain, DNA binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.4.3.1 PDB: 1kn5_A
Probab=26.91 E-value=24 Score=29.33 Aligned_cols=47 Identities=21% Similarity=0.303 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCc----hhHHhhhCCCCccHHhHHHhhhhhhhccc
Q 018383 25 ELHQRFVDAVNHLGGPDKATP----KSLMRVMGIPGLTLYHLKSHLQKYRLGKS 74 (357)
Q Consensus 25 ELH~rFV~AV~qLGG~dkAtP----K~IL~lM~v~GLT~~hVKSHLQKYRl~~~ 74 (357)
+|+.-|. +|..+||.++.+. +.|.+.|++|. -..++.|..||=+...
T Consensus 49 DL~~Ly~-~V~~~GG~~~V~~~k~W~~Va~~lg~~~--~~~Lr~~Y~k~L~~yE 99 (123)
T 1kkx_A 49 NLFYLYM-LVQKFGGADQVTRTQQWSMVAQRLQISD--YQQLESIYFRILLPYE 99 (123)
T ss_dssp CTTHHHH-HHTTTSCHHHHTTSHHHHHHHHHHTCCC--HHHHHHHHHHHHHHHH
T ss_pred cHHHHHH-HHHHhcCHHhccccccHHHHHHHHCCCh--HHHHHHHHHHHHHHHH
Confidence 6777776 5899999988775 56788999988 7789999998876543
No 41
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=20.56 E-value=1.7e+02 Score=23.85 Aligned_cols=50 Identities=18% Similarity=0.132 Sum_probs=37.5
Q ss_pred CCCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhC--CCCccHHhHHHhhh
Q 018383 15 DAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMG--IPGLTLYHLKSHLQ 67 (357)
Q Consensus 15 ~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~--v~GLT~~hVKSHLQ 67 (357)
.+++|-.||+|=-+..+++|..+|.- .=+.|++.+. .+|=|--++|-+-.
T Consensus 9 ~rr~r~~WT~EEd~~L~~gV~k~G~g---~W~~I~~~~~~~f~~RT~v~lKdrWr 60 (105)
T 2aje_A 9 QRRIRRPFSVAEVEALVQAVEKLGTG---RWRDVKLCAFEDADHRTYVDLKDKWK 60 (105)
T ss_dssp CCCCCCSCCHHHHHHHHHHHHHHCSS---SHHHHHSSSSSSTTCCCHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCC---ChHHHHHHhccccCCCCHHHHHHHHH
Confidence 57889999999999999999999931 1346766552 37778888885433
No 42
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=20.39 E-value=1.6e+02 Score=22.76 Aligned_cols=44 Identities=23% Similarity=0.365 Sum_probs=0.0
Q ss_pred CccccChHHHHHHHHHHHHhCCCCCCCch---hHHhhhCCCCccHHhHHHhhhhh
Q 018383 18 PRLKWTPELHQRFVDAVNHLGGPDKATPK---SLMRVMGIPGLTLYHLKSHLQKY 69 (357)
Q Consensus 18 pRlrWT~ELH~rFV~AV~qLGG~dkAtPK---~IL~lM~v~GLT~~hVKSHLQKY 69 (357)
.+-.||+|=..+++++|...| ++ .|-..| ||=|..+++.|...|
T Consensus 3 ~k~~WT~eED~~L~~~v~~~g------~~~W~~Ia~~l--~~Rt~~qcr~Rw~~~ 49 (105)
T 1gv2_A 3 IKGPWTKEEDQRVIKLVQKYG------PKRWSVIAKHL--KGRIGKQCRERWHNH 49 (105)
T ss_dssp CCSCCCHHHHHHHHHHHHHHC------TTCHHHHHTTS--TTCCHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHhC------CCcHHHHhhhh--cCCCHHHHHHHHHhc
No 43
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.01 E-value=2.3e+02 Score=20.26 Aligned_cols=49 Identities=10% Similarity=0.206 Sum_probs=37.4
Q ss_pred CCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhhhh
Q 018383 16 AKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 71 (357)
Q Consensus 16 ~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKYRl 71 (357)
...+-.||+|=..+++++|..+|. .=..|-+++ |=|-.+++.|...|--
T Consensus 6 ~~~k~~WT~eED~~L~~~~~~~g~----~W~~Ia~~~---gRt~~qcr~Rw~~~l~ 54 (66)
T 2din_A 6 SGKKTEWSREEEEKLLHLAKLMPT----QWRTIAPII---GRTAAQCLEHYEFLLD 54 (66)
T ss_dssp SSSCCCCCHHHHHHHHHHHHHCTT----CHHHHHHHH---SSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCC----CHHHHhccc---CcCHHHHHHHHHHHhC
Confidence 345668999999999999999983 235566644 5788899999887744
Done!