Query 018384
Match_columns 357
No_of_seqs 248 out of 1833
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 08:34:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018384.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018384hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02157 3-hydroxyisobutyryl-C 100.0 2.7E-62 5.9E-67 471.4 36.6 324 33-356 36-359 (401)
2 PLN02851 3-hydroxyisobutyryl-C 100.0 4.4E-62 9.6E-67 469.7 36.2 325 32-356 40-364 (407)
3 PLN02988 3-hydroxyisobutyryl-C 100.0 1.7E-61 3.8E-66 464.5 35.7 322 35-356 10-331 (381)
4 PLN02874 3-hydroxyisobutyryl-C 100.0 1.9E-59 4E-64 452.2 37.2 324 30-355 7-330 (379)
5 PRK05617 3-hydroxyisobutyryl-C 100.0 2.6E-57 5.7E-62 432.3 33.0 312 34-354 3-317 (342)
6 KOG1684 Enoyl-CoA hydratase [L 100.0 1.8E-56 4E-61 408.2 28.8 327 27-356 31-360 (401)
7 PRK05980 enoyl-CoA hydratase; 100.0 4.8E-55 1E-59 403.6 27.5 253 34-356 3-257 (260)
8 PRK09120 p-hydroxycinnamoyl Co 100.0 1.9E-54 4.1E-59 402.1 27.3 255 32-356 6-264 (275)
9 PRK09076 enoyl-CoA hydratase; 100.0 5.1E-54 1.1E-58 396.1 28.1 250 32-356 1-252 (258)
10 PRK08150 enoyl-CoA hydratase; 100.0 4.1E-54 9E-59 395.8 27.2 247 34-356 2-249 (255)
11 PRK06142 enoyl-CoA hydratase; 100.0 3.6E-54 7.9E-59 400.2 26.6 253 34-356 6-267 (272)
12 PRK07260 enoyl-CoA hydratase; 100.0 3.6E-54 7.8E-59 396.6 26.1 253 34-356 2-255 (255)
13 PRK05862 enoyl-CoA hydratase; 100.0 4.9E-54 1.1E-58 396.1 26.5 247 34-356 4-251 (257)
14 PRK09245 enoyl-CoA hydratase; 100.0 6.9E-54 1.5E-58 397.2 27.0 255 32-356 1-260 (266)
15 PRK09674 enoyl-CoA hydratase-i 100.0 6.1E-54 1.3E-58 394.9 26.3 247 34-356 2-249 (255)
16 PRK06127 enoyl-CoA hydratase; 100.0 1.2E-53 2.7E-58 395.7 28.0 255 30-356 7-263 (269)
17 PRK08140 enoyl-CoA hydratase; 100.0 1E-53 2.2E-58 395.2 27.1 253 33-356 3-256 (262)
18 PRK07799 enoyl-CoA hydratase; 100.0 1.1E-53 2.3E-58 395.1 27.3 253 33-356 4-257 (263)
19 PRK06143 enoyl-CoA hydratase; 100.0 8E-54 1.7E-58 394.1 26.3 248 34-356 6-256 (256)
20 PLN02664 enoyl-CoA hydratase/d 100.0 8E-54 1.7E-58 398.2 26.3 251 36-356 10-269 (275)
21 PRK08258 enoyl-CoA hydratase; 100.0 1.6E-53 3.4E-58 396.7 28.2 255 32-356 15-271 (277)
22 PRK07657 enoyl-CoA hydratase; 100.0 1.1E-53 2.4E-58 394.5 26.8 251 32-356 1-254 (260)
23 PRK08139 enoyl-CoA hydratase; 100.0 1.9E-53 4E-58 393.7 28.0 251 32-356 9-260 (266)
24 PRK05809 3-hydroxybutyryl-CoA 100.0 1.8E-53 3.9E-58 393.1 26.9 250 33-356 3-254 (260)
25 PRK06563 enoyl-CoA hydratase; 100.0 1.1E-53 2.3E-58 393.5 25.3 247 36-356 1-249 (255)
26 KOG1680 Enoyl-CoA hydratase [L 100.0 1.5E-54 3.2E-59 384.8 18.6 246 35-356 38-284 (290)
27 TIGR02280 PaaB1 phenylacetate 100.0 1.8E-53 3.9E-58 392.1 26.6 249 36-356 1-250 (256)
28 PRK08138 enoyl-CoA hydratase; 100.0 2.3E-53 4.9E-58 392.4 27.2 249 32-356 5-255 (261)
29 PRK07511 enoyl-CoA hydratase; 100.0 2.8E-53 6E-58 391.9 27.5 252 34-356 3-255 (260)
30 PRK08252 enoyl-CoA hydratase; 100.0 2.3E-53 5E-58 390.9 26.8 247 32-356 1-248 (254)
31 PRK07658 enoyl-CoA hydratase; 100.0 2.1E-53 4.6E-58 392.1 26.5 248 35-356 3-251 (257)
32 PLN02600 enoyl-CoA hydratase 100.0 1.8E-53 4E-58 390.7 25.6 242 41-356 2-245 (251)
33 PRK05981 enoyl-CoA hydratase; 100.0 4.9E-53 1.1E-57 391.4 26.6 254 33-356 3-260 (266)
34 PRK05995 enoyl-CoA hydratase; 100.0 5.3E-53 1.1E-57 390.4 26.3 252 33-356 3-256 (262)
35 PRK06494 enoyl-CoA hydratase; 100.0 7.7E-53 1.7E-57 388.5 26.4 247 33-356 3-253 (259)
36 PRK07659 enoyl-CoA hydratase; 100.0 8E-53 1.7E-57 388.6 25.8 248 34-356 6-254 (260)
37 PRK05870 enoyl-CoA hydratase; 100.0 5E-53 1.1E-57 387.6 24.0 247 32-354 1-249 (249)
38 PRK07468 enoyl-CoA hydratase; 100.0 1.3E-52 2.9E-57 387.5 26.8 252 33-356 3-256 (262)
39 PLN02888 enoyl-CoA hydratase 100.0 1.2E-52 2.7E-57 387.9 26.6 252 30-356 5-258 (265)
40 PRK05674 gamma-carboxygeranoyl 100.0 7.7E-53 1.7E-57 389.4 24.7 252 33-356 4-258 (265)
41 PRK06210 enoyl-CoA hydratase; 100.0 1.1E-52 2.3E-57 390.5 25.3 254 33-356 4-266 (272)
42 PRK06023 enoyl-CoA hydratase; 100.0 1E-52 2.2E-57 385.9 24.7 245 34-354 3-251 (251)
43 PRK03580 carnitinyl-CoA dehydr 100.0 1.7E-52 3.6E-57 386.6 26.1 248 33-356 2-255 (261)
44 PRK08259 enoyl-CoA hydratase; 100.0 9.6E-53 2.1E-57 386.5 24.3 248 32-356 1-249 (254)
45 PRK06688 enoyl-CoA hydratase; 100.0 1.7E-52 3.6E-57 386.6 25.7 249 33-356 4-253 (259)
46 TIGR03210 badI 2-ketocyclohexa 100.0 2.1E-52 4.6E-57 384.7 25.4 246 34-356 2-250 (256)
47 PRK07509 enoyl-CoA hydratase; 100.0 2.9E-52 6.2E-57 385.6 26.3 252 32-356 1-257 (262)
48 TIGR01929 menB naphthoate synt 100.0 2.1E-52 4.5E-57 385.5 25.3 248 35-356 3-253 (259)
49 PRK06495 enoyl-CoA hydratase; 100.0 2.7E-52 5.9E-57 384.4 26.0 249 32-356 2-251 (257)
50 PRK05864 enoyl-CoA hydratase; 100.0 2.8E-52 6.1E-57 388.0 26.0 255 32-356 7-269 (276)
51 PRK07327 enoyl-CoA hydratase; 100.0 3.6E-52 7.7E-57 385.7 26.4 249 32-356 9-262 (268)
52 PRK06144 enoyl-CoA hydratase; 100.0 3.8E-52 8.2E-57 384.3 26.1 249 31-356 5-256 (262)
53 PRK07938 enoyl-CoA hydratase; 100.0 8E-52 1.7E-56 379.3 25.5 241 39-356 7-248 (249)
54 PF00378 ECH: Enoyl-CoA hydrat 100.0 2.3E-52 5E-57 382.7 21.9 244 37-354 1-245 (245)
55 PLN03214 probable enoyl-CoA hy 100.0 6.4E-52 1.4E-56 385.3 24.8 254 29-355 6-264 (278)
56 COG1024 CaiD Enoyl-CoA hydrata 100.0 1.3E-51 2.8E-56 380.1 26.3 249 33-356 4-254 (257)
57 PRK08260 enoyl-CoA hydratase; 100.0 1.2E-51 2.6E-56 387.3 26.0 253 33-356 3-272 (296)
58 PRK07396 dihydroxynaphthoic ac 100.0 1.4E-51 2.9E-56 382.7 25.9 251 32-356 11-263 (273)
59 PRK11423 methylmalonyl-CoA dec 100.0 2E-51 4.3E-56 379.2 25.4 248 33-356 3-255 (261)
60 PRK06072 enoyl-CoA hydratase; 100.0 3.6E-51 7.7E-56 374.9 26.9 241 36-356 2-242 (248)
61 TIGR03189 dienoyl_CoA_hyt cycl 100.0 3.3E-51 7.1E-56 375.5 26.2 241 36-356 3-245 (251)
62 PRK07827 enoyl-CoA hydratase; 100.0 5.5E-51 1.2E-55 376.5 27.0 251 33-356 5-255 (260)
63 PRK07110 polyketide biosynthes 100.0 1.3E-50 2.9E-55 371.3 26.0 243 32-351 3-246 (249)
64 PRK07854 enoyl-CoA hydratase; 100.0 1.4E-50 3E-55 369.8 25.7 235 36-356 2-237 (243)
65 PLN02921 naphthoate synthase 100.0 1.5E-50 3.2E-55 382.5 26.5 251 32-356 63-317 (327)
66 PRK12478 enoyl-CoA hydratase; 100.0 1.7E-50 3.7E-55 379.1 22.6 249 34-356 5-275 (298)
67 PRK06190 enoyl-CoA hydratase; 100.0 9.5E-50 2.1E-54 366.9 25.8 232 33-337 3-235 (258)
68 PRK07112 polyketide biosynthes 100.0 9.2E-50 2E-54 367.1 25.3 246 33-356 3-249 (255)
69 PRK08321 naphthoate synthase; 100.0 7.4E-50 1.6E-54 375.7 25.0 253 33-356 22-292 (302)
70 TIGR03222 benzo_boxC benzoyl-C 100.0 7.5E-48 1.6E-52 383.5 25.1 247 36-356 260-538 (546)
71 PRK05869 enoyl-CoA hydratase; 100.0 8E-48 1.7E-52 346.7 22.8 214 32-317 1-220 (222)
72 PRK08184 benzoyl-CoA-dihydrodi 100.0 1.9E-47 4.1E-52 381.8 24.7 245 38-356 266-542 (550)
73 PRK08788 enoyl-CoA hydratase; 100.0 1.2E-46 2.7E-51 349.7 27.5 251 31-352 14-274 (287)
74 PRK08290 enoyl-CoA hydratase; 100.0 4.3E-47 9.4E-52 354.6 24.4 235 33-336 3-257 (288)
75 PRK11730 fadB multifunctional 100.0 7.2E-47 1.6E-51 391.6 26.5 288 35-356 7-298 (715)
76 PRK06213 enoyl-CoA hydratase; 100.0 2.5E-46 5.4E-51 339.1 22.5 225 33-332 2-228 (229)
77 PRK08272 enoyl-CoA hydratase; 100.0 1.7E-45 3.6E-50 346.7 25.2 217 32-318 8-246 (302)
78 TIGR03200 dearomat_oah 6-oxocy 100.0 8.1E-45 1.8E-49 340.6 27.2 274 44-354 38-328 (360)
79 KOG1679 Enoyl-CoA hydratase [L 100.0 3.6E-46 7.7E-51 318.1 15.4 253 34-356 27-285 (291)
80 PRK11154 fadJ multifunctional 100.0 7.7E-45 1.7E-49 376.4 26.4 285 33-356 4-295 (708)
81 TIGR02440 FadJ fatty oxidation 100.0 2.9E-44 6.3E-49 371.3 27.1 277 39-355 6-289 (699)
82 KOG1681 Enoyl-CoA isomerase [L 100.0 1.6E-45 3.5E-50 316.8 13.8 255 33-356 18-285 (292)
83 TIGR02437 FadB fatty oxidation 100.0 6.1E-43 1.3E-47 361.6 27.5 288 35-356 7-298 (714)
84 TIGR02441 fa_ox_alpha_mit fatt 100.0 1.6E-42 3.4E-47 359.3 26.2 299 33-356 12-322 (737)
85 PLN02267 enoyl-CoA hydratase/i 100.0 1.7E-42 3.6E-47 315.5 22.3 185 36-223 2-191 (239)
86 KOG0016 Enoyl-CoA hydratase/is 100.0 1.3E-42 2.8E-47 305.8 19.7 254 33-356 6-264 (266)
87 cd06558 crotonase-like Crotona 100.0 9E-40 1.9E-44 289.0 20.3 190 36-227 1-191 (195)
88 COG0447 MenB Dihydroxynaphthoi 100.0 5.1E-41 1.1E-45 287.0 11.2 252 32-356 16-272 (282)
89 TIGR03222 benzo_boxC benzoyl-C 100.0 1.6E-39 3.4E-44 323.9 22.8 198 29-227 6-222 (546)
90 KOG1682 Enoyl-CoA isomerase [L 100.0 1.8E-38 3.8E-43 268.9 18.5 249 34-356 32-281 (287)
91 PRK08184 benzoyl-CoA-dihydrodi 100.0 2.9E-38 6.4E-43 315.8 22.5 196 31-227 12-226 (550)
92 cd07014 S49_SppA Signal peptid 99.8 4.6E-20 9.9E-25 160.7 10.0 141 61-221 22-173 (177)
93 cd07020 Clp_protease_NfeD_1 No 99.8 3.3E-19 7.2E-24 156.5 12.1 148 45-221 2-170 (187)
94 cd07019 S49_SppA_1 Signal pept 99.7 2.7E-16 5.9E-21 140.6 9.9 103 43-165 1-105 (211)
95 cd00394 Clp_protease_like Case 99.6 3E-14 6.6E-19 122.0 11.4 134 58-214 8-161 (161)
96 cd07022 S49_Sppa_36K_type Sign 99.6 5E-14 1.1E-18 126.3 13.0 96 50-166 13-109 (214)
97 PF13766 ECH_C: 2-enoyl-CoA Hy 99.5 1.5E-14 3.2E-19 117.1 7.8 91 259-356 5-95 (118)
98 cd07023 S49_Sppa_N_C Signal pe 99.5 1.2E-13 2.7E-18 123.3 11.2 153 44-218 2-201 (208)
99 TIGR00705 SppA_67K signal pept 99.5 1.6E-13 3.4E-18 139.7 13.3 170 40-232 306-523 (584)
100 cd07016 S14_ClpP_1 Caseinolyti 99.5 1.7E-13 3.6E-18 117.4 10.1 128 61-214 15-160 (160)
101 TIGR00706 SppA_dom signal pept 99.4 2.1E-12 4.6E-17 115.2 12.2 148 44-220 2-198 (207)
102 cd07021 Clp_protease_NfeD_like 99.3 2.4E-11 5.2E-16 105.5 11.7 140 45-217 2-171 (178)
103 cd07018 S49_SppA_67K_type Sign 99.3 1.5E-11 3.3E-16 110.9 10.0 143 57-220 25-216 (222)
104 cd07015 Clp_protease_NfeD Nodu 98.8 4.1E-08 8.9E-13 84.5 12.0 144 45-217 2-165 (172)
105 KOG1683 Hydroxyacyl-CoA dehydr 98.8 1.8E-09 3.8E-14 101.1 2.5 175 37-217 58-240 (380)
106 cd07013 S14_ClpP Caseinolytic 98.7 1.3E-07 2.9E-12 80.9 11.1 132 58-214 9-162 (162)
107 PRK00277 clpP ATP-dependent Cl 98.7 1.5E-07 3.1E-12 83.5 10.5 136 56-217 38-196 (200)
108 PRK10949 protease 4; Provision 98.7 3.3E-07 7.2E-12 93.9 14.0 153 41-216 325-528 (618)
109 PRK12553 ATP-dependent Clp pro 98.5 6.2E-07 1.3E-11 79.9 10.7 137 57-217 43-202 (207)
110 PRK12319 acetyl-CoA carboxylas 98.5 1.6E-05 3.4E-10 72.8 19.0 139 55-218 76-215 (256)
111 cd07017 S14_ClpP_2 Caseinolyti 98.5 6.9E-07 1.5E-11 77.3 8.8 132 58-214 18-171 (171)
112 CHL00198 accA acetyl-CoA carbo 98.4 1.1E-05 2.4E-10 75.7 16.4 140 55-218 132-271 (322)
113 PRK14512 ATP-dependent Clp pro 98.4 2.5E-06 5.4E-11 75.3 11.2 137 58-217 32-188 (197)
114 PF00574 CLP_protease: Clp pro 98.4 1.4E-06 3E-11 76.1 9.4 135 58-217 25-181 (182)
115 PLN03230 acetyl-coenzyme A car 98.4 1.9E-05 4.1E-10 76.0 16.1 137 56-217 200-337 (431)
116 TIGR00513 accA acetyl-CoA carb 98.3 2.9E-05 6.3E-10 72.8 16.2 139 55-218 129-268 (316)
117 PLN03229 acetyl-coenzyme A car 98.3 2.3E-05 4.9E-10 80.0 16.5 139 55-217 220-358 (762)
118 CHL00028 clpP ATP-dependent Cl 98.3 6.2E-06 1.4E-10 72.9 11.1 137 57-218 38-197 (200)
119 PRK05724 acetyl-CoA carboxylas 98.3 3E-05 6.5E-10 72.8 15.3 140 55-218 129-268 (319)
120 TIGR00493 clpP ATP-dependent C 98.3 1.3E-05 2.7E-10 70.6 11.8 137 57-216 34-190 (191)
121 COG0616 SppA Periplasmic serin 98.1 2E-05 4.3E-10 74.8 11.0 86 62-168 81-166 (317)
122 PRK11778 putative inner membra 98.1 2.3E-05 5.1E-10 74.1 11.3 156 41-220 89-289 (330)
123 PRK14513 ATP-dependent Clp pro 98.1 3.7E-05 7.9E-10 67.9 11.8 137 56-219 34-194 (201)
124 TIGR03133 malonate_beta malona 98.1 0.00019 4.2E-09 66.2 16.7 157 44-227 61-226 (274)
125 TIGR03134 malonate_gamma malon 98.1 0.00048 1E-08 62.5 19.1 156 41-220 30-192 (238)
126 PRK14514 ATP-dependent Clp pro 98.1 3.6E-05 7.9E-10 68.8 11.6 137 56-217 61-219 (221)
127 PRK12551 ATP-dependent Clp pro 98.1 6.8E-05 1.5E-09 66.0 12.3 139 57-218 33-191 (196)
128 PF01972 SDH_sah: Serine dehyd 97.9 0.00017 3.7E-09 65.6 11.8 98 55-178 69-166 (285)
129 PRK07189 malonate decarboxylas 97.9 0.00027 5.8E-09 66.0 13.3 150 44-219 70-228 (301)
130 PRK05654 acetyl-CoA carboxylas 97.9 0.00072 1.6E-08 63.2 16.0 153 40-223 118-272 (292)
131 TIGR00515 accD acetyl-CoA carb 97.8 0.0006 1.3E-08 63.5 14.6 152 40-222 117-270 (285)
132 PF01343 Peptidase_S49: Peptid 97.7 2.8E-05 6.1E-10 66.0 4.0 94 127-220 3-143 (154)
133 TIGR00705 SppA_67K signal pept 97.7 0.00036 7.8E-09 71.7 11.6 86 61-166 76-161 (584)
134 CHL00174 accD acetyl-CoA carbo 97.6 0.0011 2.5E-08 61.5 12.8 149 44-223 135-285 (296)
135 COG0740 ClpP Protease subunit 97.5 0.0011 2.4E-08 58.1 10.3 97 122-220 77-195 (200)
136 PRK12552 ATP-dependent Clp pro 97.4 0.0034 7.3E-08 56.2 12.3 143 57-218 48-215 (222)
137 TIGR01117 mmdA methylmalonyl-C 97.4 0.007 1.5E-07 61.2 16.1 159 42-222 314-486 (512)
138 COG1030 NfeD Membrane-bound se 97.3 0.0048 1E-07 60.0 13.0 148 40-216 24-187 (436)
139 PF01039 Carboxyl_trans: Carbo 97.1 0.012 2.7E-07 59.3 15.0 139 44-219 59-207 (493)
140 PRK10949 protease 4; Provision 97.1 0.0046 1E-07 63.8 11.6 86 61-166 95-180 (618)
141 COG0825 AccA Acetyl-CoA carbox 96.9 0.0013 2.8E-08 60.2 4.5 89 120-217 178-266 (317)
142 PLN02820 3-methylcrotonyl-CoA 96.6 0.062 1.3E-06 55.0 14.5 143 44-219 131-281 (569)
143 COG0777 AccD Acetyl-CoA carbox 96.4 0.15 3.3E-06 46.6 14.2 148 44-222 124-272 (294)
144 TIGR01117 mmdA methylmalonyl-C 96.2 0.1 2.3E-06 52.8 13.6 138 44-218 84-229 (512)
145 PF01039 Carboxyl_trans: Carbo 95.4 0.13 2.9E-06 51.9 10.9 159 42-222 293-469 (493)
146 PLN02820 3-methylcrotonyl-CoA 94.4 1.4 3E-05 45.3 15.1 144 56-221 380-544 (569)
147 KOG0840 ATP-dependent Clp prot 94.3 0.19 4.2E-06 45.4 7.6 132 56-216 99-256 (275)
148 COG4799 Acetyl-CoA carboxylase 92.6 0.53 1.2E-05 47.3 8.4 102 44-161 93-194 (526)
149 PLN02157 3-hydroxyisobutyryl-C 90.7 0.47 1E-05 46.6 5.6 59 293-355 228-289 (401)
150 PRK07938 enoyl-CoA hydratase; 76.5 9.9 0.00021 34.7 7.2 133 138-284 108-249 (249)
151 COG4799 Acetyl-CoA carboxylase 72.7 29 0.00063 35.2 9.7 153 47-221 328-498 (526)
152 KOG0540 3-Methylcrotonyl-CoA c 70.6 40 0.00086 33.4 9.8 148 47-221 353-511 (536)
153 TIGR00237 xseA exodeoxyribonuc 70.0 9 0.00019 38.1 5.6 80 59-160 168-247 (432)
154 PF02601 Exonuc_VII_L: Exonucl 69.4 9.8 0.00021 36.0 5.6 79 60-160 54-135 (319)
155 COG0074 SucD Succinyl-CoA synt 67.8 19 0.00041 33.5 6.7 74 40-142 144-240 (293)
156 PF13607 Succ_CoA_lig: Succiny 64.8 19 0.0004 29.8 5.6 51 65-140 41-91 (138)
157 PRK05617 3-hydroxyisobutyryl-C 63.2 19 0.00042 34.6 6.2 158 127-286 105-323 (342)
158 PRK12478 enoyl-CoA hydratase; 62.3 25 0.00054 33.0 6.7 91 182-286 176-278 (298)
159 PLN02921 naphthoate synthase 61.1 30 0.00065 33.0 7.1 92 181-286 227-320 (327)
160 smart00250 PLEC Plectin repeat 59.5 7.5 0.00016 24.3 1.8 19 195-213 17-35 (38)
161 PF00549 Ligase_CoA: CoA-ligas 59.2 20 0.00044 30.2 4.9 62 65-143 60-121 (153)
162 PTZ00187 succinyl-CoA syntheta 58.4 28 0.0006 33.1 6.2 53 66-142 212-264 (317)
163 PRK05864 enoyl-CoA hydratase; 56.9 41 0.00088 31.1 7.1 143 128-286 115-272 (276)
164 TIGR01929 menB naphthoate synt 55.2 33 0.00072 31.4 6.2 89 184-286 166-256 (259)
165 PRK08150 enoyl-CoA hydratase; 54.5 25 0.00055 32.1 5.2 91 184-288 161-254 (255)
166 PLN02600 enoyl-CoA hydratase 53.0 27 0.00058 31.8 5.1 90 183-286 156-248 (251)
167 PRK07468 enoyl-CoA hydratase; 52.4 31 0.00068 31.6 5.5 90 183-286 167-259 (262)
168 PRK05980 enoyl-CoA hydratase; 51.5 73 0.0016 29.0 7.8 88 184-285 169-259 (260)
169 PF00681 Plectin: Plectin repe 50.9 5 0.00011 26.2 -0.0 19 195-213 17-35 (45)
170 PRK08258 enoyl-CoA hydratase; 50.6 34 0.00073 31.7 5.5 89 184-286 183-274 (277)
171 PRK06143 enoyl-CoA hydratase; 50.5 44 0.00095 30.6 6.1 134 135-282 111-255 (256)
172 PF06833 MdcE: Malonate decarb 49.1 29 0.00063 31.4 4.5 145 55-219 40-189 (234)
173 PRK09076 enoyl-CoA hydratase; 48.7 41 0.00088 30.7 5.7 89 184-286 164-255 (258)
174 TIGR00377 ant_ant_sig anti-ant 48.7 66 0.0014 24.5 6.1 50 34-88 3-52 (108)
175 PRK06072 enoyl-CoA hydratase; 48.3 36 0.00078 30.9 5.2 64 220-286 180-245 (248)
176 PRK07854 enoyl-CoA hydratase; 47.6 42 0.00092 30.4 5.5 84 184-286 155-240 (243)
177 PRK06142 enoyl-CoA hydratase; 47.5 41 0.00088 31.0 5.5 91 182-286 176-270 (272)
178 PRK06563 enoyl-CoA hydratase; 46.7 46 0.001 30.3 5.7 89 184-286 161-252 (255)
179 PRK00286 xseA exodeoxyribonucl 46.6 32 0.00068 34.2 4.9 78 60-160 175-252 (438)
180 PRK07659 enoyl-CoA hydratase; 46.6 41 0.00089 30.8 5.3 88 184-286 167-257 (260)
181 TIGR03189 dienoyl_CoA_hyt cycl 46.2 50 0.0011 30.1 5.8 88 184-286 157-248 (251)
182 COG1570 XseA Exonuclease VII, 46.2 38 0.00081 33.6 5.1 57 61-137 176-232 (440)
183 TIGR03210 badI 2-ketocyclohexa 46.1 48 0.0011 30.2 5.7 89 183-285 162-252 (256)
184 PRK08252 enoyl-CoA hydratase; 45.8 88 0.0019 28.4 7.4 90 183-286 159-251 (254)
185 COG3660 Predicted nucleoside-d 45.7 2.6E+02 0.0056 26.1 10.3 134 32-167 109-260 (329)
186 PRK07112 polyketide biosynthes 45.6 42 0.00092 30.6 5.2 87 184-286 164-252 (255)
187 PRK06494 enoyl-CoA hydratase; 45.0 1.2E+02 0.0025 27.7 8.1 91 182-286 161-256 (259)
188 PRK07509 enoyl-CoA hydratase; 44.9 46 0.00099 30.4 5.4 62 222-286 197-260 (262)
189 TIGR02280 PaaB1 phenylacetate 44.6 49 0.0011 30.2 5.5 91 182-286 160-253 (256)
190 PRK06127 enoyl-CoA hydratase; 44.3 44 0.00096 30.7 5.2 89 184-286 175-266 (269)
191 KOG1680 Enoyl-CoA hydratase [L 44.1 38 0.00082 31.4 4.5 91 182-286 194-287 (290)
192 PRK05981 enoyl-CoA hydratase; 43.9 46 0.001 30.5 5.2 91 182-286 170-263 (266)
193 PRK07396 dihydroxynaphthoic ac 43.6 53 0.0012 30.3 5.6 90 183-286 175-266 (273)
194 PRK08321 naphthoate synthase; 41.7 60 0.0013 30.5 5.7 135 138-286 149-295 (302)
195 PRK05862 enoyl-CoA hydratase; 41.4 56 0.0012 29.8 5.4 89 184-286 163-254 (257)
196 PRK03580 carnitinyl-CoA dehydr 40.9 73 0.0016 29.1 6.0 89 184-286 163-258 (261)
197 PLN02522 ATP citrate (pro-S)-l 40.3 69 0.0015 33.4 6.2 52 66-142 210-262 (608)
198 PRK05809 3-hydroxybutyryl-CoA 39.8 56 0.0012 29.8 5.1 89 184-286 166-257 (260)
199 PRK07657 enoyl-CoA hydratase; 39.7 59 0.0013 29.7 5.2 90 183-286 165-257 (260)
200 PRK08139 enoyl-CoA hydratase; 39.3 69 0.0015 29.4 5.6 90 183-286 171-263 (266)
201 PLN02664 enoyl-CoA hydratase/d 39.0 62 0.0014 29.9 5.3 90 183-286 179-272 (275)
202 PLN02874 3-hydroxyisobutyryl-C 38.7 42 0.00091 32.8 4.2 158 127-287 110-337 (379)
203 PRK07799 enoyl-CoA hydratase; 38.7 76 0.0016 29.0 5.8 90 183-286 168-260 (263)
204 PRK06495 enoyl-CoA hydratase; 38.3 65 0.0014 29.4 5.3 90 183-286 162-254 (257)
205 PRK05995 enoyl-CoA hydratase; 37.7 70 0.0015 29.2 5.4 90 183-286 166-259 (262)
206 PRK09245 enoyl-CoA hydratase; 37.6 68 0.0015 29.4 5.3 89 184-286 172-263 (266)
207 PRK07327 enoyl-CoA hydratase; 37.5 78 0.0017 29.1 5.7 90 184-287 175-266 (268)
208 PLN00125 Succinyl-CoA ligase [ 36.7 96 0.0021 29.3 6.1 12 130-141 233-244 (300)
209 TIGR02886 spore_II_AA anti-sig 36.6 1.7E+02 0.0038 22.1 6.8 50 37-91 2-51 (106)
210 PLN02888 enoyl-CoA hydratase 36.1 67 0.0015 29.5 5.0 92 183-288 167-263 (265)
211 PRK06210 enoyl-CoA hydratase; 35.7 83 0.0018 28.9 5.6 90 183-286 176-269 (272)
212 PRK07658 enoyl-CoA hydratase; 35.2 71 0.0015 29.0 5.0 89 184-286 163-254 (257)
213 PRK05674 gamma-carboxygeranoyl 34.8 84 0.0018 28.8 5.4 89 184-286 169-261 (265)
214 PRK11423 methylmalonyl-CoA dec 34.6 1E+02 0.0022 28.2 5.9 89 184-286 165-258 (261)
215 PRK09674 enoyl-CoA hydratase-i 34.5 83 0.0018 28.6 5.3 89 184-286 161-252 (255)
216 PRK08140 enoyl-CoA hydratase; 34.4 82 0.0018 28.8 5.3 91 182-286 166-259 (262)
217 PRK06091 membrane protein FdrA 32.5 1.3E+02 0.0027 31.0 6.5 22 121-142 270-291 (555)
218 PF01740 STAS: STAS domain; I 31.6 2E+02 0.0043 22.2 6.5 48 36-88 2-57 (117)
219 PRK06144 enoyl-CoA hydratase; 30.2 1E+02 0.0022 28.1 5.2 87 183-286 171-259 (262)
220 PRK08260 enoyl-CoA hydratase; 30.0 1.3E+02 0.0029 28.0 6.0 90 184-287 182-276 (296)
221 PF13838 Clathrin_H_link: Clat 29.0 60 0.0013 23.2 2.6 40 258-317 8-47 (66)
222 PF06258 Mito_fiss_Elm1: Mitoc 27.2 5.4E+02 0.012 24.3 10.6 132 30-168 95-245 (311)
223 PRK07511 enoyl-CoA hydratase; 26.9 1.4E+02 0.0031 27.1 5.5 88 184-285 167-257 (260)
224 KOG1255 Succinyl-CoA synthetas 26.4 1.7E+02 0.0036 26.8 5.5 55 66-141 219-273 (329)
225 TIGR02717 AcCoA-syn-alpha acet 25.1 1.7E+02 0.0036 29.3 6.0 53 65-142 190-242 (447)
226 PRK08138 enoyl-CoA hydratase; 24.6 1.5E+02 0.0032 27.1 5.1 90 183-286 166-258 (261)
227 PF03464 eRF1_2: eRF1 domain 2 24.4 1.2E+02 0.0027 24.5 4.1 45 44-88 25-83 (133)
228 PRK07827 enoyl-CoA hydratase; 24.1 1.6E+02 0.0034 26.9 5.2 62 221-285 194-257 (260)
229 PRK06688 enoyl-CoA hydratase; 23.2 1.6E+02 0.0034 26.7 5.1 88 184-285 165-255 (259)
230 COG0528 PyrH Uridylate kinase 22.5 2.8E+02 0.0062 25.2 6.3 53 33-91 5-57 (238)
231 KOG3179 Predicted glutamine sy 22.4 1.7E+02 0.0037 26.0 4.7 43 79-140 60-103 (245)
232 KOG3997 Major apurinic/apyrimi 22.4 1.3E+02 0.0028 27.1 4.0 58 39-99 135-192 (281)
233 TIGR02153 gatD_arch glutamyl-t 20.9 3.4E+02 0.0074 26.8 7.1 33 56-88 118-150 (404)
234 PRK13505 formate--tetrahydrofo 20.9 1.8E+02 0.0039 29.9 5.2 70 77-150 323-392 (557)
235 smart00463 SMR Small MutS-rela 20.5 2.1E+02 0.0045 20.6 4.3 31 60-90 12-43 (80)
236 PRK05678 succinyl-CoA syntheta 20.3 2.4E+02 0.0052 26.5 5.7 22 66-87 188-209 (291)
237 PF14842 FliG_N: FliG N-termin 20.2 1.3E+02 0.0028 23.5 3.3 85 190-281 12-100 (108)
238 PF00195 Chal_sti_synt_N: Chal 20.2 79 0.0017 28.5 2.3 76 64-162 106-183 (226)
No 1
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=2.7e-62 Score=471.40 Aligned_cols=324 Identities=69% Similarity=1.130 Sum_probs=284.0
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHH
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (357)
.+.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++............
T Consensus 36 ~~~V~~e~~g~v~~ItLNRP~~lNALs~~m~~~L~~al~~~~~D~~vrvVVl~G~GkaFcAGgDl~~l~~~~~~~~~~~~ 115 (401)
T PLN02157 36 DYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGSPDAI 115 (401)
T ss_pred CCceEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCccCCcCHHHHHhhccccchHHH
Confidence 56688999999999999999999999999999999999999999999999999999999999999988643211112223
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHH
Q 018384 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF 192 (357)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~ 192 (357)
..++...+.+.+.|.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..+++
T Consensus 116 ~~~~~~~~~l~~~i~~~pkPvIA~v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G~~a~~ 195 (401)
T PLN02157 116 REFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEY 195 (401)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhhHHHHH
Confidence 44555556677889999999999999999999999999999999999999999999999999999999999999966999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCH
Q 018384 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (357)
Q Consensus 193 l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (357)
|++||++++|+||+++|||+++||++++.+..+.+.++...+|.++...|+.+.....+...........+..||+.++.
T Consensus 196 L~LTG~~i~A~eA~~~GLv~~vVp~~~l~~~~~~~~~i~~~~p~av~~~k~~~~~~~~~~~~~l~~~~~~i~~~f~~~d~ 275 (401)
T PLN02157 196 LGLTGLKLSGAEMLACGLATHYIRSEEIPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFSHDTV 275 (401)
T ss_pred HHHcCCcCCHHHHHHcCCceEEeCHhHHHHHHHHHHHHHcCCHHHHHHHHHHHhcccCCcchhHHHHHHHHHHHhcCCCH
Confidence 99999999999999999999999999997666666788888999999999988755333334455557889999999999
Q ss_pred HHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018384 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 352 (357)
Q Consensus 273 e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl 352 (357)
+++++.|+....+..++|++++++.|.+.||+|+++|.++++++...+++++++.|+++..+++....++||.|||||.|
T Consensus 276 ~ei~~al~~~~~kr~~~wa~~~~~~l~~~sP~Sl~vt~~~~~~~~~~~l~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~L 355 (401)
T PLN02157 276 EEIIDSLEIEAGRRKDTWCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARL 355 (401)
T ss_pred HHHHHHHHhhhcccchHHHHHHHHHHHhcCcHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 99999997543334568999999999999999999999999999999999999999999988874112589999999999
Q ss_pred ccCC
Q 018384 353 LNKH 356 (357)
Q Consensus 353 ~~r~ 356 (357)
+||+
T Consensus 356 iDKd 359 (401)
T PLN02157 356 IDKD 359 (401)
T ss_pred cCCC
Confidence 9986
No 2
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=4.4e-62 Score=469.65 Aligned_cols=325 Identities=66% Similarity=1.136 Sum_probs=286.7
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHH
Q 018384 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 32 ~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
..+.|.++..+++++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++.+...........
T Consensus 40 ~~~~v~~e~~~~~~~ItLNRP~~lNALs~~m~~eL~~al~~~~~D~~vrvVVL~G~GkaFcAGgDl~~l~~~~~~~~~~~ 119 (407)
T PLN02851 40 LQDQVLVEGRAKSRAAILNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVSLYHLINEGNVEE 119 (407)
T ss_pred CCCCeEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHHhhccccchHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999865322222244
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHH
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE 191 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~ 191 (357)
...++...+.+.+.|.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..+.
T Consensus 120 ~~~~f~~~~~l~~~i~~~pKPvIA~v~G~amGGG~gLal~~D~rVate~a~famPE~~iGl~PdvG~s~~L~rl~g~~g~ 199 (407)
T PLN02851 120 CKLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPGYLGE 199 (407)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEcCEEeeHHHHHHHhCCEEEEeCCceEecchhccCCCCCccHHHHHHHhcCHHHH
Confidence 55667778888889999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCC
Q 018384 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (357)
Q Consensus 192 ~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
+|++||++++|+||+++||+++++|++++.++.+.+.++...++..+....+.|.....+...........|++||+.++
T Consensus 200 ~L~LTG~~i~a~eA~~~GLa~~~v~~~~l~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~I~~~F~~~s 279 (407)
T PLN02851 200 YLALTGQKLNGVEMIACGLATHYCLNARLPLIEERLGKLLTDDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHDT 279 (407)
T ss_pred HHHHhCCcCCHHHHHHCCCceeecCHhhHHHHHHHHHhhccCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999777777777777778888888888864322222344555789999999999
Q ss_pred HHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018384 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 351 (357)
Q Consensus 272 ~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~af 351 (357)
+++|++.|+.......++|++++++.|.+.||+|+++|+++++++...+++++++.|+++..+++....++||.|||||.
T Consensus 280 v~~I~~~L~~~~~~~~~~wa~~~~~~l~~~SP~Sl~vt~~~~~~~~~~sl~e~l~~E~~l~~~~~~~~~~~DF~EGVRA~ 359 (407)
T PLN02851 280 VEEIIEALENEAASSYDEWCKKALKKIKEASPLSLKVTLQSIREGRFQTLDQCLAREYRISLCGVSKWVSGDFCEGVRAR 359 (407)
T ss_pred HHHHHHHHHhcccccchHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCccchHHHHHHHH
Confidence 99999999975433356899999999999999999999999999999999999999999998886211279999999999
Q ss_pred eccCC
Q 018384 352 ILNKH 356 (357)
Q Consensus 352 l~~r~ 356 (357)
|+||+
T Consensus 360 LIDKd 364 (407)
T PLN02851 360 LVDKD 364 (407)
T ss_pred hcCCC
Confidence 99986
No 3
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=100.00 E-value=1.7e-61 Score=464.50 Aligned_cols=322 Identities=48% Similarity=0.815 Sum_probs=281.5
Q ss_pred ceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHH
Q 018384 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD 114 (357)
Q Consensus 35 ~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~ 114 (357)
.|.++.+++|++||||||++.|+||.+|+.+|.++|+.++.|+++++|||+|.|++||+|+|++++......+.......
T Consensus 10 ~v~~~~~~~i~~ItLnRP~~lNALs~~m~~~L~~al~~~~~d~~v~~VVl~G~G~~FcAGgDl~~l~~~~~~~~~~~~~~ 89 (381)
T PLN02988 10 QVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGNWRLGAN 89 (381)
T ss_pred ceEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCcccCcCHHHHHhhhcccchhHHHH
Confidence 57888899999999999999999999999999999999999999999999999999999999998753221111122233
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHHHH
Q 018384 115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA 194 (357)
Q Consensus 115 ~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ 194 (357)
++...+.+...+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..+.+|+
T Consensus 90 ~f~~~~~l~~~i~~~pKPvIa~v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~~~~~l~ 169 (381)
T PLN02988 90 FFSDEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVG 169 (381)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHHHHHHHH
Confidence 44444556778899999999999999999999999999999999999999999999999999999999999998789999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCHHH
Q 018384 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE 274 (357)
Q Consensus 195 ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 274 (357)
+||++++|+||+++|||+++||++++.+....++++...+|..+...++.+.................|++||+.+++++
T Consensus 170 LTG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~la~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~f~~~~~~~ 249 (381)
T PLN02988 170 LTGARLDGAEMLACGLATHFVPSTRLTALEADLCRIGSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRCFSRRTVEE 249 (381)
T ss_pred HcCCCCCHHHHHHcCCceEecCHhHHHHHHHHHHHhhccCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHhCCCCHHH
Confidence 99999999999999999999999999988888888888889999999998865432122334445889999999999999
Q ss_pred HHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheecc
Q 018384 275 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN 354 (357)
Q Consensus 275 i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl~~ 354 (357)
|++.|+....+...+|++++++.|.+.||+|+++|+++++++...++.++++.|+++..+++....++||.|||||.|+|
T Consensus 250 i~~~L~~~~~~~~~~wa~~~~~~l~~~sP~sl~vt~~~~~~~~~~sl~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiD 329 (381)
T PLN02988 250 IISALEREATQEADGWISATIQALKKASPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKDFVEGCRAILVD 329 (381)
T ss_pred HHHHHHhhccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHhcC
Confidence 99999974322356899999999999999999999999999999999999999999999988511148999999999999
Q ss_pred CC
Q 018384 355 KH 356 (357)
Q Consensus 355 r~ 356 (357)
|+
T Consensus 330 Kd 331 (381)
T PLN02988 330 KD 331 (381)
T ss_pred CC
Confidence 86
No 4
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=1.9e-59 Score=452.23 Aligned_cols=324 Identities=44% Similarity=0.748 Sum_probs=278.5
Q ss_pred ccCCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCCh
Q 018384 30 DDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL 109 (357)
Q Consensus 30 ~~~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~ 109 (357)
++.++.+.++++++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||+|.|++||+|+|++++...... .
T Consensus 7 ~~~~~~v~~~~~~~v~~ItLnrP~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~--~ 84 (379)
T PLN02874 7 NPAEEVVLGEEKGRVRVITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRES--D 84 (379)
T ss_pred CCCCCceEEEEECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCccCHHHHHhhccc--c
Confidence 34456688999999999999999999999999999999999999999999999999999999999999987542111 1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH
Q 018384 110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 189 (357)
Q Consensus 110 ~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~ 189 (357)
.....+....+.++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..
T Consensus 85 ~~~~~~~~~~~~l~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g~~ 164 (379)
T PLN02874 85 DSCLEVVYRMYWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGHL 164 (379)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCEEEEecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhHHH
Confidence 12223334445567789999999999999999999999999999999999999999999999999999999999999966
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCC
Q 018384 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (357)
Q Consensus 190 a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (357)
+.+|++||++++|+||+++|||+++||++++.+....+.++...+...++..++.+.................|.+||+.
T Consensus 165 a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~ 244 (379)
T PLN02874 165 GEYLALTGARLNGKEMVACGLATHFVPSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSK 244 (379)
T ss_pred HHHHHHcCCcccHHHHHHcCCccEEeCHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCC
Confidence 99999999999999999999999999999888766666666666777788888777654333344555568899999999
Q ss_pred CCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 018384 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN 349 (357)
Q Consensus 270 ~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~ 349 (357)
++++++++.+++..++..++|+.+++++|+++||.|++.+|++++.+...+++++++.|.......+....++||+||++
T Consensus 245 ~~~~eii~al~~~~~~~~~~~A~~~a~~l~~~sP~al~~tk~~~~~~~~~~l~~~l~~e~~~~~~~~~~~~~~D~~EGv~ 324 (379)
T PLN02874 245 DTVEEIIKAFESEASKTGNEWIKETLKGLRRSSPTGLKITLRSIREGRKQSLAECLKKEFRLTMNILRSTVSDDVYEGIR 324 (379)
T ss_pred CCHHHHHHHHhhcccccccHHHHHHHHHHHhcChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhcCcCcchhhccc
Confidence 99999999999877766789999999999999999999999999998888999999999888766653223799999999
Q ss_pred heeccC
Q 018384 350 FQILNK 355 (357)
Q Consensus 350 afl~~r 355 (357)
||+++|
T Consensus 325 AflidK 330 (379)
T PLN02874 325 ALVIDK 330 (379)
T ss_pred eEEEcC
Confidence 998433
No 5
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=100.00 E-value=2.6e-57 Score=432.33 Aligned_cols=312 Identities=38% Similarity=0.652 Sum_probs=268.6
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCChHHH
Q 018384 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC 112 (357)
Q Consensus 34 ~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (357)
+.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++............
T Consensus 3 ~~v~~~~~~~v~~itLnrP~~~Nal~~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (342)
T PRK05617 3 DEVLAEVEGGVGVITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAGDPLAA 82 (342)
T ss_pred ceEEEEEECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhccCCchhH
Confidence 3588899999999999999999999999999999999999999999999999999 999999999987542211111111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHH
Q 018384 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF 192 (357)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~ 192 (357)
..++.....++.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..+++
T Consensus 83 ~~~~~~~~~~~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g~~a~~ 162 (342)
T PRK05617 83 DRFFREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGALGTY 162 (342)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhcccHHHHH
Confidence 13444445678889999999999999999999999999999999999999999999999999999999999998844999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhh-cCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCC
Q 018384 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLV-TDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (357)
Q Consensus 193 l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
|++||+.++|+||+++|||++++|++++.+..+.+.++- ..+...+.+.+..+.... ....+......|++||+..+
T Consensus 163 llltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~ 240 (342)
T PRK05617 163 LALTGARISAADALYAGLADHFVPSADLPALLDALISLRWDSGADVVDAALAAFATPA--PASELAAQRAWIDECFAGDT 240 (342)
T ss_pred HHHcCCCCCHHHHHHcCCcceecCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccCC--CcchhHHHHHHHHHHhCCCC
Confidence 999999999999999999999999988876544443222 334455666666654442 22367778899999999999
Q ss_pred HHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018384 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 351 (357)
Q Consensus 272 ~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~af 351 (357)
+++|++.|++. .++|+.+++++|+++||.+++.+|+++++....+++++++.|...+...+. ++|++||+++|
T Consensus 241 ~~~~~~~l~~~----~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~egv~af 313 (342)
T PRK05617 241 VEDIIAALEAD----GGEFAAKTADTLRSRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAMLR---SPDFVEGVRAV 313 (342)
T ss_pred HHHHHHHHHhc----cHHHHHHHHHHHHhCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh---CCchhhccceE
Confidence 99999999987 458999999999999999999999999998888999999999999999987 99999999999
Q ss_pred e-cc
Q 018384 352 I-LN 354 (357)
Q Consensus 352 l-~~ 354 (357)
+ ++
T Consensus 314 l~ek 317 (342)
T PRK05617 314 LIDK 317 (342)
T ss_pred EEcC
Confidence 7 54
No 6
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=1.8e-56 Score=408.16 Aligned_cols=327 Identities=50% Similarity=0.809 Sum_probs=301.8
Q ss_pred CCcccCCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhc
Q 018384 27 SVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMN 105 (357)
Q Consensus 27 ~~~~~~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~ 105 (357)
....+..+.|.++.++...+||||||+.+||||.+|...+.-.|..++.++.+++||+.|.| ++||+|+|+........
T Consensus 31 ~~~~~~~~~VL~e~~~~~r~itLNRPKaLNAlnleMv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~ 110 (401)
T KOG1684|consen 31 SVSTDSKDQVLVEGKGCARVITLNRPKALNALNLEMVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIK 110 (401)
T ss_pred ccccccCCceEEecCCceeEEEecCchhhccccHHHHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhh
Confidence 33445567899999999999999999999999999999999999999999999999999995 99999999998877777
Q ss_pred cCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhc
Q 018384 106 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL 185 (357)
Q Consensus 106 ~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~ 185 (357)
++.......|+...+.+...|.++.||.||.+||..+|||++|+..--||||+|++.|.+||..+|++|+.|++++++|+
T Consensus 111 d~~~~~~~~fF~~eYsl~~~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrl 190 (401)
T KOG1684|consen 111 DKETPEVKKFFTEEYSLNHLIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRL 190 (401)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHhcCceEEEeeceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhC
Confidence 77777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCH-HHHHHHHHHhhccCCCChhhHHHHHHHHH
Q 018384 186 PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDP-SVIEACLEKYSDLVYPDKNSVIHRIDIVD 264 (357)
Q Consensus 186 ~g~~a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (357)
+|..+.||.|||.++++.||+..||.+|.||.+++...++++......+| ..+.+..+.|.....+.........+.|+
T Consensus 191 pg~lg~YLgLTG~rl~GaD~~~~GlATHyv~S~~l~~Lee~L~~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~ 270 (401)
T KOG1684|consen 191 PGYLGLYLGLTGQRLSGADALRCGLATHYVPSEKLPSLEERLLKNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVIN 270 (401)
T ss_pred ccHHHHhhhhccceecchHHHHhcchhhccchhhhhHHHHHHhhhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHH
Confidence 99779999999999999999999999999999999998888875555555 78899999999887766666777889999
Q ss_pred HHcCCCCHHHHHHHHhccc-CCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCC
Q 018384 265 KCFGLDTVEEIIDSLESEA-SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGD 343 (357)
Q Consensus 265 ~~~~~~~~e~i~~~l~~~~-~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d 343 (357)
.||+++++|+|++.|.+.. .....+||+++++.|.+.||+|+++|.++++++..+++++++.+|+++..+.+. +.|
T Consensus 271 ~~Fs~~tVeeIie~lk~~q~~~~~~ewak~tlk~L~k~SPtSLkvT~r~i~egs~~tl~~~l~~Eyr~s~~~~~---~~D 347 (401)
T KOG1684|consen 271 KCFSANTVEEIIEALKNYQQSADGSEWAKETLKTLKKMSPTSLKVTLRQIREGSKQTLDQCLTMEYRLSLRMLM---RGD 347 (401)
T ss_pred HhhccccHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhh---ccc
Confidence 9999999999999875432 445669999999999999999999999999999999999999999999999887 999
Q ss_pred hhhhhhheeccCC
Q 018384 344 FYEVSNFQILNKH 356 (357)
Q Consensus 344 ~~egi~afl~~r~ 356 (357)
|.||+||.|+||+
T Consensus 348 F~EGvRA~LIDKd 360 (401)
T KOG1684|consen 348 FCEGVRAVLIDKD 360 (401)
T ss_pred hhhhhhheeecCC
Confidence 9999999999996
No 7
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.8e-55 Score=403.58 Aligned_cols=253 Identities=28% Similarity=0.370 Sum_probs=227.5
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCChHHH
Q 018384 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC 112 (357)
Q Consensus 34 ~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (357)
+.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++............
T Consensus 3 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (260)
T PRK05980 3 DTVLIEIRDGIALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAGADVAL 82 (260)
T ss_pred ceEEEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccccchhhH
Confidence 4688999999999999999999999999999999999999999999999999999 799999999987542111111223
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HH
Q 018384 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (357)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (357)
..+......++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 83 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~ 162 (260)
T PRK05980 83 RDFVRRGQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRAL 162 (260)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHHHHH
Confidence 34555556788889999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCC
Q 018384 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (357)
Q Consensus 192 ~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
+|+++|++++|+||+++|||++++|++++.+.+.
T Consensus 163 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 196 (260)
T PRK05980 163 ELLLTGDAFSAERALEIGLVNAVVPHEELLPAAR---------------------------------------------- 196 (260)
T ss_pred HHHHcCCccCHHHHHHcCCCCcccCHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999887765433
Q ss_pred HHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018384 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 351 (357)
Q Consensus 272 ~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~af 351 (357)
+++++|++.+|.++..+|++++.....+++++++.|...+...+. ++|++||+++|
T Consensus 197 ---------------------~~a~~la~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af 252 (260)
T PRK05980 197 ---------------------ALARRIIRHSPVAVAAILTAVTRGLNLSIAEGLLIESEQFARMAG---SADLREGLAAW 252 (260)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHH
Confidence 348889999999999999999998888999999999999999887 99999999999
Q ss_pred eccCC
Q 018384 352 ILNKH 356 (357)
Q Consensus 352 l~~r~ 356 (357)
+++|+
T Consensus 253 ~~kr~ 257 (260)
T PRK05980 253 IERRR 257 (260)
T ss_pred hccCC
Confidence 99986
No 8
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=100.00 E-value=1.9e-54 Score=402.06 Aligned_cols=255 Identities=22% Similarity=0.287 Sum_probs=223.5
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHH
Q 018384 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 32 ~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
.++.+.++++++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|.|++++...........
T Consensus 6 ~~~~i~~~~~~~va~itlnrp~~~Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 85 (275)
T PRK09120 6 RWDTVKVEVEDGIAWVTLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQPEIL 85 (275)
T ss_pred ccccEEEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCceecCcCHHHHhhccccchhHH
Confidence 46779999999999999999999999999999999999999999999999999999999999999998743211111111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-H
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (357)
...+....+.++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 86 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a 165 (275)
T PRK09120 86 QERIRREAYGWWRRLRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHRDA 165 (275)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCHHHH
Confidence 222333456678889999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 191 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
++|+++|++++|+||+++|||++|||++++++.+.+
T Consensus 166 ~~llltg~~~~A~eA~~~Glv~~vv~~~~l~~~a~~-------------------------------------------- 201 (275)
T PRK09120 166 LYYIMTGETFTGRKAAEMGLVNESVPLAQLRARTRE-------------------------------------------- 201 (275)
T ss_pred HHHHhcCCccCHHHHHHcCCcceecCHHHHHHHHHH--------------------------------------------
Confidence 999999999999999999999999999888754443
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHH--HHHhhhcCCCC-Chhhh
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRM--SLQGVSRLISG-DFYEV 347 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~--~~~~~~~~~s~-d~~eg 347 (357)
++++|+..||.+++.+|++++.....+++++++.|... +...+. ++ |++||
T Consensus 202 -----------------------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~d~~eg 255 (275)
T PRK09120 202 -----------------------LAAKLLEKNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQANSLD---PEGGREEG 255 (275)
T ss_pred -----------------------HHHHHHhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhC---CHHHHHHH
Confidence 48999999999999999999998888999999887654 333454 77 89999
Q ss_pred hhheeccCC
Q 018384 348 SNFQILNKH 356 (357)
Q Consensus 348 i~afl~~r~ 356 (357)
+++|+++|.
T Consensus 256 ~~afl~kr~ 264 (275)
T PRK09120 256 LKQFLDDKS 264 (275)
T ss_pred HHHHHhccc
Confidence 999999885
No 9
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.1e-54 Score=396.13 Aligned_cols=250 Identities=20% Similarity=0.253 Sum_probs=225.0
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCChH
Q 018384 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLE 110 (357)
Q Consensus 32 ~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~ 110 (357)
|+..+.++++++|++||||||++ |++|.+|+.+|.+++++++.|+++++|||+|.| ++||+|+|++++... +..
T Consensus 1 ~~~~v~~~~~~~v~~itlnrp~~-Nal~~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~----~~~ 75 (258)
T PRK09076 1 MMIELDLEIDGHVAILTLNNPPA-NTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADG----DKA 75 (258)
T ss_pred CceEEEEEEECCEEEEEECCCCc-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhc----Chh
Confidence 34568899999999999999985 999999999999999999999999999999999 799999999987531 112
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-
Q 018384 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (357)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~- 189 (357)
....+...+..++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 76 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~ 155 (258)
T PRK09076 76 VAREMARRFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEGW 155 (258)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHHH
Confidence 2223344456678889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCC
Q 018384 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (357)
Q Consensus 190 a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (357)
+++|+++|++++|+||+++|||++|+|++++.+.+.
T Consensus 156 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------------- 191 (258)
T PRK09076 156 AKRMILCGERVDAATALRIGLVEEVVEKGEAREAAL-------------------------------------------- 191 (258)
T ss_pred HHHHHHcCCcCCHHHHHHCCCCceecCchhHHHHHH--------------------------------------------
Confidence 999999999999999999999999999887764333
Q ss_pred CCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 018384 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN 349 (357)
Q Consensus 270 ~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~ 349 (357)
+++++|+.++|.+++.+|++++.....++++.++.|...+...+. ++|++||++
T Consensus 192 -----------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~eg~~ 245 (258)
T PRK09076 192 -----------------------ALAQKVANQSPSAVAACKTLIQAARNGPRAAALALERELFVDLFD---TEDQREGVN 245 (258)
T ss_pred -----------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CchHHHHHH
Confidence 348999999999999999999988888899999999999988887 999999999
Q ss_pred heeccCC
Q 018384 350 FQILNKH 356 (357)
Q Consensus 350 afl~~r~ 356 (357)
+|+++|+
T Consensus 246 af~~kr~ 252 (258)
T PRK09076 246 AFLEKRA 252 (258)
T ss_pred HHhcCCC
Confidence 9999985
No 10
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.1e-54 Score=395.75 Aligned_cols=247 Identities=25% Similarity=0.229 Sum_probs=222.6
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHH
Q 018384 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (357)
Q Consensus 34 ~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (357)
+.|.++++++|++||||||++.|+||.+|+.+|.+++++++ +++++|||||.|++||+|+|++++.... .....
T Consensus 2 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~--~~vr~vvltg~g~~F~aG~Dl~~~~~~~----~~~~~ 75 (255)
T PRK08150 2 SLVSYELDGGVATIGLNRPAKRNALNDGLIAALRAAFARLP--EGVRAVVLHGEGDHFCAGLDLSELRERD----AGEGM 75 (255)
T ss_pred ceEEEEeeCCEEEEEEcCCccccCCCHHHHHHHHHHHHHhh--cCCeEEEEECCCCceecCcCHHHHhhcc----chhHH
Confidence 56889999999999999999999999999999999999987 7899999999999999999999875321 11122
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHH
Q 018384 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (357)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (357)
.+...+..++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 76 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~ 155 (255)
T PRK08150 76 HHSRRWHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVARMTD 155 (255)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHH
Confidence 3344556778889999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCH
Q 018384 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (357)
Q Consensus 193 l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (357)
|+++|++++|+||+++||||+++|++++.+.+.
T Consensus 156 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------- 188 (255)
T PRK08150 156 MMLTGRVYDAQEGERLGLAQYLVPAGEALDKAM----------------------------------------------- 188 (255)
T ss_pred HHHcCCcCCHHHHHHcCCccEeeCchHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999888765443
Q ss_pred HHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018384 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 352 (357)
Q Consensus 273 e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl 352 (357)
+++++|+.+||.+++.+|++++.....+++++++.|...+...+. ++|++||+++|+
T Consensus 189 --------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~ 245 (255)
T PRK08150 189 --------------------ELARRIAQNAPLTNFAVLNALPRIADMSADDGLFVESLMAAVAQS---APEAKERLRAFL 245 (255)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHh
Confidence 348999999999999999999988888899999999988877776 999999999999
Q ss_pred ccCC
Q 018384 353 LNKH 356 (357)
Q Consensus 353 ~~r~ 356 (357)
++|+
T Consensus 246 ~kr~ 249 (255)
T PRK08150 246 EKKA 249 (255)
T ss_pred ccCC
Confidence 9885
No 11
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.6e-54 Score=400.16 Aligned_cols=253 Identities=23% Similarity=0.283 Sum_probs=226.2
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhc-------c
Q 018384 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-------Q 106 (357)
Q Consensus 34 ~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~-------~ 106 (357)
+.+.++++++|++|+||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|.|++++..... .
T Consensus 6 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~ 85 (272)
T PRK06142 6 ESFTVELADHVAQVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLGKDGLA 85 (272)
T ss_pred ceEEEEecCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhhhcccccccccc
Confidence 568999999999999999999999999999999999999999999999999999999999999998754210 0
Q ss_pred CChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcC
Q 018384 107 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP 186 (357)
Q Consensus 107 ~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~ 186 (357)
........+...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~ 165 (272)
T PRK06142 86 RPRTDLRREILRLQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRII 165 (272)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCCCCEEEEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHHHHh
Confidence 01122333444566788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHH-HHHHHhcCCCCCHHHHHHcCccceecCC-CChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHH
Q 018384 187 GHL-GEFLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVD 264 (357)
Q Consensus 187 g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (357)
|.. +++|+++|++++|+||+++|||++++|+ +++.+.+.
T Consensus 166 G~~~a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~~l~~~a~--------------------------------------- 206 (272)
T PRK06142 166 GDGHLRELALTGRDIDAAEAEKIGLVNRVYDDADALLAAAH--------------------------------------- 206 (272)
T ss_pred CHHHHHHHHHhCCCcCHHHHHHcCCccEecCCHHHHHHHHH---------------------------------------
Confidence 999 9999999999999999999999999986 66654333
Q ss_pred HHcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCCh
Q 018384 265 KCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDF 344 (357)
Q Consensus 265 ~~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~ 344 (357)
+++++|++.||.+++.+|++++.....+++++++.|...+...+. ++|+
T Consensus 207 ----------------------------~~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~~~~~~---~~d~ 255 (272)
T PRK06142 207 ----------------------------ATAREIAAKSPLAVRGTKEVLDYMRDHRVADGLRYVATWNAAMLP---SKDL 255 (272)
T ss_pred ----------------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CccH
Confidence 238899999999999999999988888999999999999988887 9999
Q ss_pred hhhhhheeccCC
Q 018384 345 YEVSNFQILNKH 356 (357)
Q Consensus 345 ~egi~afl~~r~ 356 (357)
+||+++|+++|+
T Consensus 256 ~egv~af~~kr~ 267 (272)
T PRK06142 256 TEAIAAHMEKRP 267 (272)
T ss_pred HHHHHHHhcCCC
Confidence 999999999985
No 12
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.6e-54 Score=396.56 Aligned_cols=253 Identities=23% Similarity=0.350 Sum_probs=227.6
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHH
Q 018384 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (357)
Q Consensus 34 ~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (357)
+++.++++++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.............
T Consensus 2 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 81 (255)
T PRK07260 2 EHIIYEVEDDLATLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDEDDVQSLV 81 (255)
T ss_pred CceEEEEECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccccCHHHHHhhccccchhhHH
Confidence 45788899999999999999999999999999999999999999999999999999999999999875432112222223
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHH
Q 018384 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (357)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (357)
.+...++.++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 82 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ 161 (255)
T PRK07260 82 KIAELVNEISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLNRATH 161 (255)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHHHHHH
Confidence 3444556788899999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCH
Q 018384 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (357)
Q Consensus 193 l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (357)
|+++|++++|+||+++|||++++|++++.+.+..
T Consensus 162 l~l~g~~~sa~eA~~~Glv~~vv~~~~l~~~a~~---------------------------------------------- 195 (255)
T PRK07260 162 LAMTGEALTAEKALEYGFVYRVAESEKLEKTCEQ---------------------------------------------- 195 (255)
T ss_pred HHHhCCccCHHHHHHcCCcceecCHhHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999998887654443
Q ss_pred HHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018384 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 352 (357)
Q Consensus 273 e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl 352 (357)
++++|++.+|.+++.+|+.++.....+++++++.|...+...+. ++|++||+++|+
T Consensus 196 ---------------------~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af~ 251 (255)
T PRK07260 196 ---------------------LLKKLRRGSSNSYAAIKSLVWESFFKGWEDYAKLELALQESLAF---KEDFKEGVRAFS 251 (255)
T ss_pred ---------------------HHHHHHcCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHH
Confidence 38999999999999999999998888999999999999888887 999999999999
Q ss_pred ccCC
Q 018384 353 LNKH 356 (357)
Q Consensus 353 ~~r~ 356 (357)
++|+
T Consensus 252 ~kr~ 255 (255)
T PRK07260 252 ERRR 255 (255)
T ss_pred hcCC
Confidence 9985
No 13
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.9e-54 Score=396.11 Aligned_cols=247 Identities=25% Similarity=0.330 Sum_probs=223.2
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHH
Q 018384 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (357)
Q Consensus 34 ~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (357)
+.+.++++++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||+|.|++||+|+|++++... .. ..
T Consensus 4 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~----~~--~~ 77 (257)
T PRK05862 4 ETILVETRGRVGLITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADL----SF--MD 77 (257)
T ss_pred ceEEEEeeCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCceECCcChHhHhcc----ch--hH
Confidence 4588899999999999999999999999999999999999999999999999999999999999987531 11 11
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHH
Q 018384 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (357)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (357)
.+...+..++.+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+
T Consensus 78 ~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 157 (257)
T PRK05862 78 VYKGDYITNWEKVARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKAKAMD 157 (257)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEccEEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCHHHHHH
Confidence 1222334467789999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCH
Q 018384 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (357)
Q Consensus 193 l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (357)
|+++|++++|+||+++|||++++|++++.+.+.
T Consensus 158 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------- 190 (257)
T PRK05862 158 LCLTGRMMDAAEAERAGLVSRVVPADKLLDEAL----------------------------------------------- 190 (257)
T ss_pred HHHhCCccCHHHHHHcCCCCEeeCHhHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999888765433
Q ss_pred HHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018384 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 352 (357)
Q Consensus 273 e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl 352 (357)
+++++|++.+|.++..+|++++.....+++++++.|...+...+. ++|++||+++|+
T Consensus 191 --------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~~~~e~i~af~ 247 (257)
T PRK05862 191 --------------------AAATTIASFSLPAVMMAKEAVNRAYETTLAEGLLFERRLFHSLFA---TEDQKEGMAAFV 247 (257)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHh
Confidence 238889999999999999999998888999999999999988887 999999999999
Q ss_pred ccCC
Q 018384 353 LNKH 356 (357)
Q Consensus 353 ~~r~ 356 (357)
++|+
T Consensus 248 ~kr~ 251 (257)
T PRK05862 248 EKRK 251 (257)
T ss_pred ccCC
Confidence 9985
No 14
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.9e-54 Score=397.16 Aligned_cols=255 Identities=21% Similarity=0.328 Sum_probs=225.6
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCH-HHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhcc--CC
Q 018384 32 LCNQVLVEGKANSRMAILNRPSALNALNT-NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ--GK 108 (357)
Q Consensus 32 ~~~~i~~~~~~~v~~I~ln~p~~~Nal~~-~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~--~~ 108 (357)
|.+.+.++++++|++||||||++.|++|. +|+.+|.+++++++.|+++++|||+|.|++||+|.|++++...... ..
T Consensus 1 m~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (266)
T PRK09245 1 MTDFLLVERDGHIVTLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAFGGS 80 (266)
T ss_pred CCCceEEEEECCEEEEEECCcccccCCChHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCHHHHhhcccccccc
Confidence 34568999999999999999999999995 9999999999999999999999999999999999999987542110 01
Q ss_pred hHHH-HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcCh
Q 018384 109 LEEC-KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 187 (357)
Q Consensus 109 ~~~~-~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g 187 (357)
.... ..+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG 160 (266)
T PRK09245 81 PADIRQGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIG 160 (266)
T ss_pred chhHHHHHHHHHHHHHHHHHcCCCCEEEEECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhh
Confidence 1111 223333456778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHH
Q 018384 188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 266 (357)
Q Consensus 188 ~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (357)
.. +++|+++|++++|+||+++|||++++|++++.+.+.
T Consensus 161 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------- 199 (266)
T PRK09245 161 MARAAEMAFTGDAIDAATALEWGLVSRVVPADQLLPAAR----------------------------------------- 199 (266)
T ss_pred HHHHHHHHHcCCCcCHHHHHHcCCcceecCHHHHHHHHH-----------------------------------------
Confidence 99 999999999999999999999999999888765433
Q ss_pred cCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhh
Q 018384 267 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 346 (357)
Q Consensus 267 ~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~e 346 (357)
+++++|++.||.+++.+|++++.....++++.++.|...+...+. ++|++|
T Consensus 200 --------------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e 250 (266)
T PRK09245 200 --------------------------ALAERIAANPPHALRLTKRLLREGQHASLDTLLELSAAYQALAHH---TADHRE 250 (266)
T ss_pred --------------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHhHHH
Confidence 348999999999999999999988888899999999998888887 999999
Q ss_pred hhhheeccCC
Q 018384 347 VSNFQILNKH 356 (357)
Q Consensus 347 gi~afl~~r~ 356 (357)
|+++|+++|+
T Consensus 251 g~~af~~kr~ 260 (266)
T PRK09245 251 AVDAFLEKRP 260 (266)
T ss_pred HHHHHHcCCC
Confidence 9999999985
No 15
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=100.00 E-value=6.1e-54 Score=394.90 Aligned_cols=247 Identities=23% Similarity=0.300 Sum_probs=223.2
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHH
Q 018384 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (357)
Q Consensus 34 ~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (357)
..+.++++++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++... +. ..
T Consensus 2 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~~~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~--~~ 75 (255)
T PRK09674 2 SELLVSRQQRVLLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEK----DL--AA 75 (255)
T ss_pred ceEEEEeECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecccChHhHhcc----ch--hh
Confidence 3578899999999999999999999999999999999999999999999999999999999999987431 11 11
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHH
Q 018384 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (357)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (357)
.+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 76 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~ 155 (255)
T PRK09674 76 TLNDPRPQLWQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASQ 155 (255)
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHH
Confidence 1223335577889999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCH
Q 018384 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (357)
Q Consensus 193 l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (357)
|+++|+.++|+||+++|||++++|++++.+.+.
T Consensus 156 l~l~g~~~~a~eA~~~Glv~~vv~~~~~~~~a~----------------------------------------------- 188 (255)
T PRK09674 156 MVLTGESITAQQAQQAGLVSEVFPPELTLERAL----------------------------------------------- 188 (255)
T ss_pred HHHcCCccCHHHHHHcCCCcEecChHHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999887754333
Q ss_pred HHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018384 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 352 (357)
Q Consensus 273 e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl 352 (357)
+++++|+..||.+++.+|++++.....+++++++.|...+...+. ++|++||+++|+
T Consensus 189 --------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~i~af~ 245 (255)
T PRK09674 189 --------------------QLASKIARHSPLALRAAKQALRQSQEVDLQAGLAQERQLFTLLAA---TEDRHEGISAFL 245 (255)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHh
Confidence 348999999999999999999998888999999999999988887 999999999999
Q ss_pred ccCC
Q 018384 353 LNKH 356 (357)
Q Consensus 353 ~~r~ 356 (357)
++|+
T Consensus 246 ~kr~ 249 (255)
T PRK09674 246 EKRT 249 (255)
T ss_pred ccCC
Confidence 9885
No 16
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.2e-53 Score=395.74 Aligned_cols=255 Identities=21% Similarity=0.298 Sum_probs=228.9
Q ss_pred ccCCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCC
Q 018384 30 DDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGK 108 (357)
Q Consensus 30 ~~~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~ 108 (357)
+...+.+.++++++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... ..
T Consensus 7 ~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~--~~ 84 (269)
T PRK06127 7 SSPTGKLLAEKTGGLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESR--SD 84 (269)
T ss_pred CCCCCceEEEEECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcc--cc
Confidence 34456689999999999999999999999999999999999999999999999999998 7999999999875321 11
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChH
Q 018384 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188 (357)
Q Consensus 109 ~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~ 188 (357)
......+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus 85 ~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~ 164 (269)
T PRK06127 85 AEAVAAYEQAVEAAQAALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGP 164 (269)
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCH
Confidence 22223444555677888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHc
Q 018384 189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF 267 (357)
Q Consensus 189 ~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (357)
. +++|+++|++++|+||+++|||++|+|++++.+.+.+
T Consensus 165 ~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~----------------------------------------- 203 (269)
T PRK06127 165 SAAKDLFYTARRFDAAEALRIGLVHRVTAADDLETALAD----------------------------------------- 203 (269)
T ss_pred HHHHHHHHcCCCCCHHHHHHcCCCCEeeCHHHHHHHHHH-----------------------------------------
Confidence 9 9999999999999999999999999998887654443
Q ss_pred CCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhh
Q 018384 268 GLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEV 347 (357)
Q Consensus 268 ~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~eg 347 (357)
++++|+..||.+++.+|++++.....++++.++.|...+...+. ++|++||
T Consensus 204 --------------------------~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~ 254 (269)
T PRK06127 204 --------------------------YAATIAGNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACFD---SEDYREG 254 (269)
T ss_pred --------------------------HHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---ChHHHHH
Confidence 38899999999999999999988888899999999999888887 9999999
Q ss_pred hhheeccCC
Q 018384 348 SNFQILNKH 356 (357)
Q Consensus 348 i~afl~~r~ 356 (357)
+.+|+++|+
T Consensus 255 ~~af~ekr~ 263 (269)
T PRK06127 255 RAAFMEKRK 263 (269)
T ss_pred HHHHhcCCC
Confidence 999999985
No 17
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1e-53 Score=395.21 Aligned_cols=253 Identities=23% Similarity=0.287 Sum_probs=223.6
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHH
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (357)
++.+.++++++|++||||||++.|++|.+|+.+|.+++++++ |+++++|||+|.|++||+|+|++++............
T Consensus 3 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~-d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 81 (262)
T PRK08140 3 YETILLAIEAGVATLTLNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADRDVTPGGAMPDLG 81 (262)
T ss_pred CceEEEEeECCEEEEEecCCcccCCCCHHHHHHHHHHHHHhc-CCCceEEEEECCCCCcccCcChHHHhccccccchhhH
Confidence 356889999999999999999999999999999999999999 9999999999999999999999987431101111111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HH
Q 018384 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (357)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (357)
..+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 82 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~ 161 (262)
T PRK08140 82 ESIETFYNPLVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMARAL 161 (262)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCHHHHH
Confidence 12222234577889999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCC
Q 018384 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (357)
Q Consensus 192 ~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
+|+++|++++++||+++|||++|+|++++.+.+.
T Consensus 162 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 195 (262)
T PRK08140 162 GLALLGEKLSAEQAEQWGLIWRVVDDAALADEAQ---------------------------------------------- 195 (262)
T ss_pred HHHHcCCCcCHHHHHHcCCccEeeChHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999888764333
Q ss_pred HHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018384 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 351 (357)
Q Consensus 272 ~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~af 351 (357)
+++++|++.||.++..+|++++.....+++++++.|...+...+. ++|++||+++|
T Consensus 196 ---------------------~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af 251 (262)
T PRK08140 196 ---------------------QLAAHLATQPTRGLALIKQAMNASATNTLDAQLDLERDLQREAGR---SADYAEGVSAF 251 (262)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHH
Confidence 348999999999999999999988888999999999999888887 99999999999
Q ss_pred eccCC
Q 018384 352 ILNKH 356 (357)
Q Consensus 352 l~~r~ 356 (357)
+++|+
T Consensus 252 ~~kr~ 256 (262)
T PRK08140 252 LEKRA 256 (262)
T ss_pred hcCCC
Confidence 99985
No 18
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-53 Score=395.14 Aligned_cols=253 Identities=23% Similarity=0.264 Sum_probs=221.2
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHH
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (357)
++.+.++++++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++............
T Consensus 4 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 83 (263)
T PRK07799 4 GPHALVEQRGHTLIVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKPPGDSFKDG 83 (263)
T ss_pred CceEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccccCHHHHhhccccchhhhh
Confidence 35688999999999999999999999999999999999999999999999999999999999999987642110000000
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HH
Q 018384 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (357)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (357)
......+..+ ..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 84 ~~~~~~~~~~-~~~~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 162 (263)
T PRK07799 84 SYDPSRIDAL-LKGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTVAC 162 (263)
T ss_pred hhhhhHHHHH-HHHhcCCCCEEEEECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHHHHH
Confidence 0001122223 347889999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCC
Q 018384 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (357)
Q Consensus 192 ~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
+|+++|++++|+||+++|||++++|++++.+.+.
T Consensus 163 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 196 (263)
T PRK07799 163 DLLLTGRHITAAEAKEIGLIGHVVPDGQALDKAL---------------------------------------------- 196 (263)
T ss_pred HHHHcCCCCCHHHHHHcCCccEecCcchHHHHHH----------------------------------------------
Confidence 9999999999999999999999999988754332
Q ss_pred HHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018384 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 351 (357)
Q Consensus 272 ~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~af 351 (357)
+++++|++.||.+++.+|++++.....+++++++.|.+.+...+. ++|++||+++|
T Consensus 197 ---------------------~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af 252 (263)
T PRK07799 197 ---------------------ELAELINANGPLAVQAILRTIRETEGMHENEAFKIDTKIGIPVFL---SEDAKEGPRAF 252 (263)
T ss_pred ---------------------HHHHHHHhcChHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CccHHHHHHHH
Confidence 348899999999999999999988888999999999999988887 99999999999
Q ss_pred eccCC
Q 018384 352 ILNKH 356 (357)
Q Consensus 352 l~~r~ 356 (357)
+++|+
T Consensus 253 ~~~r~ 257 (263)
T PRK07799 253 AEKRA 257 (263)
T ss_pred HccCC
Confidence 99885
No 19
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8e-54 Score=394.07 Aligned_cols=248 Identities=21% Similarity=0.295 Sum_probs=223.1
Q ss_pred CceEEE-EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCChHH
Q 018384 34 NQVLVE-GKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 34 ~~i~~~-~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
..+.++ .+++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||||.| ++||+|+|++++... +...
T Consensus 6 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~----~~~~ 81 (256)
T PRK06143 6 AHAGVTRDDRGVATLTIRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATL----DQAS 81 (256)
T ss_pred ccceeeecCCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhc----Chhh
Confidence 456666 4688999999999999999999999999999999999999999999999 799999999987532 1222
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-H
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (357)
...+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+ |++|++++|++++|.. +
T Consensus 82 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~~~a 160 (256)
T PRK06143 82 AEAFISRLRDLCDAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGWART 160 (256)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCHHHH
Confidence 3344556677888999999999999999999999999999999999999999999999998 7888899999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 191 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
++|+++|++++|+||+++||||+++|++++.+.+.
T Consensus 161 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 195 (256)
T PRK06143 161 RWLLLTGETIDAAQALAWGLVDRVVPLAELDAAVE--------------------------------------------- 195 (256)
T ss_pred HHHHHcCCcCCHHHHHHCCCcCeecCHHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999888765443
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 350 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~a 350 (357)
+++++|+.+||.++..+|++++.....+++++++.|...+...+. ++|++||+++
T Consensus 196 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~e~~~a 250 (256)
T PRK06143 196 ----------------------RLAASLAGCGPQALRQQKRLLREWEDMPLDVAIDDSVAEFGAAFL---TGEPQRHMAA 250 (256)
T ss_pred ----------------------HHHHHHHcCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhc---ChHHHHHHHH
Confidence 348999999999999999999988888899999999999988887 9999999999
Q ss_pred eeccCC
Q 018384 351 QILNKH 356 (357)
Q Consensus 351 fl~~r~ 356 (357)
|++||+
T Consensus 251 f~ekr~ 256 (256)
T PRK06143 251 FLNRKR 256 (256)
T ss_pred HHhhcC
Confidence 999985
No 20
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=100.00 E-value=8e-54 Score=398.20 Aligned_cols=251 Identities=24% Similarity=0.306 Sum_probs=221.8
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhcc---CC----
Q 018384 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ---GK---- 108 (357)
Q Consensus 36 i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~---~~---- 108 (357)
+..+.+++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++...... .+
T Consensus 10 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~ 89 (275)
T PLN02664 10 IQKSPNSSVFHLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQSSSGDRGRS 89 (275)
T ss_pred EEecCCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCceeeCcChHHhhhcccccccccchhh
Confidence 44556899999999999999999999999999999999999999999999999999999999987542110 01
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChH
Q 018384 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188 (357)
Q Consensus 109 ~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~ 188 (357)
......+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~ 169 (275)
T PLN02664 90 GERLRRKIKFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGY 169 (275)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhCH
Confidence 11222334445667888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCC-CChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHH
Q 018384 189 L-GEFLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 266 (357)
Q Consensus 189 ~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (357)
. +++|++||++++|+||+++|||+++||+ +++.+.+.
T Consensus 170 ~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~~~----------------------------------------- 208 (275)
T PLN02664 170 GNAMELALTGRRFSGSEAKELGLVSRVFGSKEDLDEGVR----------------------------------------- 208 (275)
T ss_pred HHHHHHHHhCCCCCHHHHHHcCCCceeeCChhHHHHHHH-----------------------------------------
Confidence 9 9999999999999999999999999985 66654333
Q ss_pred cCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhh
Q 018384 267 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 346 (357)
Q Consensus 267 ~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~e 346 (357)
+++++|+++||.+++.+|++++.....+++++++.|...+...+. ++|++|
T Consensus 209 --------------------------~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e 259 (275)
T PLN02664 209 --------------------------LIAEGIAAKSPLAVTGTKAVLLRSRELSVEQGLDYVATWNSAMLV---SDDLNE 259 (275)
T ss_pred --------------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc---ChhHHH
Confidence 348899999999999999999988888999999999998888877 999999
Q ss_pred hhhheeccCC
Q 018384 347 VSNFQILNKH 356 (357)
Q Consensus 347 gi~afl~~r~ 356 (357)
|+++|+++|+
T Consensus 260 g~~af~ekr~ 269 (275)
T PLN02664 260 AVSAQIQKRK 269 (275)
T ss_pred HHHHHhccCC
Confidence 9999999985
No 21
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-53 Score=396.67 Aligned_cols=255 Identities=20% Similarity=0.272 Sum_probs=227.1
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHH
Q 018384 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 32 ~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
....+.++++++|++|+||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++.......+...
T Consensus 15 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~ 94 (277)
T PRK08258 15 EARHFLWEVDDGVATITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMDMPE 94 (277)
T ss_pred cccceEEEEECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCcccccCHHHHhccccccChhH
Confidence 33468899999999999999999999999999999999999999999999999999999999999998743211112222
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccC-CCcHHHHHhhcChHH-
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP-DAGASFYLSHLPGHL- 189 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p-~~g~~~~l~r~~g~~- 189 (357)
...+......++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++| ++|++++|++++|..
T Consensus 95 ~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~ 174 (277)
T PRK08258 95 LLAFTRMTGDLVKAMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQGR 174 (277)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHHH
Confidence 334445556788899999999999999999999999999999999999999999999999985 788999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCC
Q 018384 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (357)
Q Consensus 190 a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (357)
+++|+++|++++|+||+++|||++++|++++.+.+.
T Consensus 175 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------------- 210 (277)
T PRK08258 175 ASELLYTGRSMSAEEGERWGFFNRLVEPEELLAEAQ-------------------------------------------- 210 (277)
T ss_pred HHHHHHcCCCCCHHHHHHcCCCcEecCHHHHHHHHH--------------------------------------------
Confidence 999999999999999999999999999887765333
Q ss_pred CCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 018384 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN 349 (357)
Q Consensus 270 ~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~ 349 (357)
+++++|++.||.+++.+|++++.....+++++++.|...+...+. ++|++||++
T Consensus 211 -----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~eg~~ 264 (277)
T PRK08258 211 -----------------------ALARRLAAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQAQAICMQ---TEDFRRAYE 264 (277)
T ss_pred -----------------------HHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhc---CchHHHHHH
Confidence 348899999999999999999998888999999999999988887 999999999
Q ss_pred heeccCC
Q 018384 350 FQILNKH 356 (357)
Q Consensus 350 afl~~r~ 356 (357)
+|+++|+
T Consensus 265 af~ekr~ 271 (277)
T PRK08258 265 AFVAKRK 271 (277)
T ss_pred HHhcCCC
Confidence 9999985
No 22
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-53 Score=394.45 Aligned_cols=251 Identities=21% Similarity=0.318 Sum_probs=227.2
Q ss_pred CCCceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCCh
Q 018384 32 LCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKL 109 (357)
Q Consensus 32 ~~~~i~~~~-~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~ 109 (357)
|.+.+.+++ +++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++... ..
T Consensus 1 ~~~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~----~~ 76 (260)
T PRK07657 1 MLQNISVDYVTPHVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGM----NE 76 (260)
T ss_pred CCceEEEEEccCCEEEEEEeCCcccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcC----Ch
Confidence 346788886 789999999999999999999999999999999999999999999999 599999999987531 12
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH
Q 018384 110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 189 (357)
Q Consensus 110 ~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~ 189 (357)
.....+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~ 156 (260)
T PRK07657 77 EQVRHAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVG 156 (260)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCHH
Confidence 22334455567788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcC
Q 018384 190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 268 (357)
Q Consensus 190 -a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (357)
+++|+++|++++++||+++|||++++|++++.+.+.
T Consensus 157 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------- 193 (260)
T PRK07657 157 RAKELIYTGRRISAQEAKEIGLVEFVVPAHLLEEKAI------------------------------------------- 193 (260)
T ss_pred HHHHHHHhCCCCCHHHHHHcCCCCeecCHHHHHHHHH-------------------------------------------
Confidence 999999999999999999999999999888765443
Q ss_pred CCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhh
Q 018384 269 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVS 348 (357)
Q Consensus 269 ~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi 348 (357)
+++++|+.++|.+++.+|++++.....+++++++.|...+...+. ++|++||+
T Consensus 194 ------------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~ 246 (260)
T PRK07657 194 ------------------------EIAEKIASNGPIAVRQAKEAISNGIQVDLHTGLQIEKQAYEGTIP---TKDRLEGL 246 (260)
T ss_pred ------------------------HHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CHhHHHHH
Confidence 348899999999999999999988888899999999999988887 99999999
Q ss_pred hheeccCC
Q 018384 349 NFQILNKH 356 (357)
Q Consensus 349 ~afl~~r~ 356 (357)
++|+++|+
T Consensus 247 ~af~~~r~ 254 (260)
T PRK07657 247 QAFKEKRK 254 (260)
T ss_pred HHHhcCCC
Confidence 99999885
No 23
>PRK08139 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.9e-53 Score=393.74 Aligned_cols=251 Identities=20% Similarity=0.257 Sum_probs=225.7
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHH
Q 018384 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 32 ~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
..+.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++... .....
T Consensus 9 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~~~ 85 (266)
T PRK08139 9 EAPLLLREDRDGVATLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAA---RGLAY 85 (266)
T ss_pred cCCceEEEeeCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEecCCCcceeccCHHHHhcc---cchhH
Confidence 346788999999999999999999999999999999999999999999999999999999999999987531 11222
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-H
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (357)
...++..+.+++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+++ +++|++++|.. +
T Consensus 86 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG~~~A 164 (266)
T PRK08139 86 FRALFARCSRVMQAIVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVPRKQA 164 (266)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhCHHHH
Confidence 334455566788899999999999999999999999999999999999999999999999998765 56799999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 191 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
++|+++|++++|+||+++||||+|+|++++.+.+.+
T Consensus 165 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~-------------------------------------------- 200 (266)
T PRK08139 165 MEMLLTGEFIDAATAREWGLVNRVVPADALDAAVAR-------------------------------------------- 200 (266)
T ss_pred HHHHHcCCccCHHHHHHcCCccEeeChhHHHHHHHH--------------------------------------------
Confidence 999999999999999999999999998887654433
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 350 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~a 350 (357)
++++|++.||.+++.+|++++.....+++++++.|...+...+. ++|++||+++
T Consensus 201 -----------------------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~a 254 (266)
T PRK08139 201 -----------------------LAAVIAAKSPAAVRIGKEAFYRQAEMPLADAYAYAGDVMAENMM---AEDAEEGIDA 254 (266)
T ss_pred -----------------------HHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CchHHHHHHH
Confidence 38999999999999999999998888999999999999888887 9999999999
Q ss_pred eeccCC
Q 018384 351 QILNKH 356 (357)
Q Consensus 351 fl~~r~ 356 (357)
|+++|+
T Consensus 255 f~~kr~ 260 (266)
T PRK08139 255 FLEKRP 260 (266)
T ss_pred HhcCCC
Confidence 999885
No 24
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=100.00 E-value=1.8e-53 Score=393.15 Aligned_cols=250 Identities=27% Similarity=0.372 Sum_probs=226.3
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCChHH
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
++.+.++++++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||||.| ++||+|+|++++... ....
T Consensus 3 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~----~~~~ 78 (260)
T PRK05809 3 LKNVILEKEGHIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDL----NEEE 78 (260)
T ss_pred cceEEEEEeCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhcc----ChHH
Confidence 45688999999999999999999999999999999999999999999999999999 999999999987532 1122
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-H
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (357)
...+......++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 79 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a 158 (260)
T PRK05809 79 GRKFGLLGNKVFRKLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKA 158 (260)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHH
Confidence 223334445678889999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 191 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
++|+++|++++|+||+++|||++++|++++.+.+.
T Consensus 159 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 193 (260)
T PRK05809 159 KELIYTGDMINAEEALRIGLVNKVVEPEKLMEEAK--------------------------------------------- 193 (260)
T ss_pred HHHHHhCCCCCHHHHHHcCCCCcccChHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999877754333
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 350 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~a 350 (357)
+++++|+..||.+++.+|++++.....+++++++.|.+.+...+. ++|++||+++
T Consensus 194 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~egi~a 248 (260)
T PRK05809 194 ----------------------ALANKIAANAPIAVKLCKDAINRGMQVDIDTAVAIEAEDFGECFS---TEDQTEGMTA 248 (260)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 348899999999999999999998888999999999999999887 9999999999
Q ss_pred eeccCC
Q 018384 351 QILNKH 356 (357)
Q Consensus 351 fl~~r~ 356 (357)
|+++|+
T Consensus 249 f~~~r~ 254 (260)
T PRK05809 249 FVEKRE 254 (260)
T ss_pred HhcCCC
Confidence 999885
No 25
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-53 Score=393.46 Aligned_cols=247 Identities=20% Similarity=0.189 Sum_probs=218.3
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHH
Q 018384 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (357)
Q Consensus 36 i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (357)
|.++++++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++....... ...+
T Consensus 1 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~----~~~~ 76 (255)
T PRK06563 1 VSRERRGHVLLIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAPKLAAG----GFPF 76 (255)
T ss_pred CeEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCCcCCcCHHHHhhccccc----hhhh
Confidence 467889999999999999999999999999999999999999999999999999999999999875421111 1111
Q ss_pred HHH-HHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHHH
Q 018384 116 FRT-LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL 193 (357)
Q Consensus 116 ~~~-~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l 193 (357)
... ...+...+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|
T Consensus 77 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l 156 (255)
T PRK06563 77 PEGGIDPWGTVGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRY 156 (255)
T ss_pred hhhhhHHHHHHHhcCCCCEEEEEcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHHHHHHH
Confidence 111 12223357889999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCHH
Q 018384 194 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273 (357)
Q Consensus 194 ~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 273 (357)
++||++++|+||+++||||+++|++++.+.+.
T Consensus 157 ~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------------ 188 (255)
T PRK06563 157 LLTGDEFDAQEALRLGLVQEVVPPGEQLERAI------------------------------------------------ 188 (255)
T ss_pred HHcCCCcCHHHHHHcCCCcEeeCHHHHHHHHH------------------------------------------------
Confidence 99999999999999999999999887754333
Q ss_pred HHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheec
Q 018384 274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQIL 353 (357)
Q Consensus 274 ~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl~ 353 (357)
+++++|++.+|.+++.+|++++.....++.++++.|...+...+. ++|++||+++|++
T Consensus 189 -------------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~ 246 (255)
T PRK06563 189 -------------------ELAERIARAAPLGVQATLASARAAVREGEAAAAAQLPPELRPLFT---SEDAKEGVQAFLE 246 (255)
T ss_pred -------------------HHHHHHHhcCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhc
Confidence 348899999999999999999988888999999999999988887 9999999999999
Q ss_pred cCC
Q 018384 354 NKH 356 (357)
Q Consensus 354 ~r~ 356 (357)
+|+
T Consensus 247 kr~ 249 (255)
T PRK06563 247 RRP 249 (255)
T ss_pred CCC
Confidence 985
No 26
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-54 Score=384.80 Aligned_cols=246 Identities=26% Similarity=0.307 Sum_probs=218.8
Q ss_pred ceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHH
Q 018384 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD 114 (357)
Q Consensus 35 ~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~ 114 (357)
......+++|+.|+||||+++|+++..++.+|.+++..++.|++++++||||.|++||+|.|++++.......- ....
T Consensus 38 ~~~~~~d~~I~lItlNRP~~~Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e~~~~~~~~~--~~~~ 115 (290)
T KOG1680|consen 38 IELVGEDNGIALITLNRPKALNALCRATMLELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKEMKKDEFQDV--SDGI 115 (290)
T ss_pred eEEeecCCCeEEEEeCChHHhccccHHHHHHHHHHHHHhhccCcccEEEEEcCCCccccccCHHHHhhcccccc--cccc
Confidence 34455678899999999999999999999999999999999999999999999999999999999865321100 0011
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHHH
Q 018384 115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL 193 (357)
Q Consensus 115 ~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l 193 (357)
+ .+.+..+.+.+||+||+|||+|+|||++|++.||+||++++|+|++|+.++|++|.+|++++|+|.+|.. |+++
T Consensus 116 ~----~~~~~~~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s~Ale~ 191 (290)
T KOG1680|consen 116 F----LRVWDLVSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKSRALEM 191 (290)
T ss_pred c----cchhhhhhhcccceeEeeeceeeccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChHHHHHH
Confidence 1 2223344479999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCHH
Q 018384 194 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273 (357)
Q Consensus 194 ~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 273 (357)
++||++++|+||+++|||++|+|.+++...+.
T Consensus 192 ~ltg~~~~AqeA~~~GlVn~Vvp~~~~l~eAv------------------------------------------------ 223 (290)
T KOG1680|consen 192 ILTGRRLGAQEAKKIGLVNKVVPSGDALGEAV------------------------------------------------ 223 (290)
T ss_pred HHhcCcccHHHHHhCCceeEeecchhHHHHHH------------------------------------------------
Confidence 99999999999999999999999988653222
Q ss_pred HHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheec
Q 018384 274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQIL 353 (357)
Q Consensus 274 ~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl~ 353 (357)
+++.+|+++||..++..|+.++.+.+.++.+++..|...+...+. ++|.+|||.+|.+
T Consensus 224 -------------------~l~~~Ia~~~~~~v~~~K~svn~~~e~~l~e~l~~e~~~~~s~~~---~~d~~Eg~~~f~~ 281 (290)
T KOG1680|consen 224 -------------------KLAEQIAKNSPLVVRADKESVNAAYETTLFEGLELERDLFGSTFA---TEDRLEGMTAFAE 281 (290)
T ss_pred -------------------HHHHHHHhCCHHHHHHHHHHHHHHhhccHHHHHHhhhhhhhhhhh---hHHHHHHHHHhcc
Confidence 348999999999999999999999999999999999999999988 9999999999999
Q ss_pred cCC
Q 018384 354 NKH 356 (357)
Q Consensus 354 ~r~ 356 (357)
||+
T Consensus 282 kr~ 284 (290)
T KOG1680|consen 282 KRK 284 (290)
T ss_pred cCC
Confidence 885
No 27
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=100.00 E-value=1.8e-53 Score=392.12 Aligned_cols=249 Identities=23% Similarity=0.292 Sum_probs=221.0
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHH
Q 018384 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (357)
Q Consensus 36 i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (357)
|.++++++|++||||||++.|++|.+|+.+|.+++++++.|+ +++|||||.|++||+|+|++++.... .........+
T Consensus 1 ~~~e~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~-v~~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~ 78 (256)
T TIGR02280 1 ILSALEAGVARLTLNRPDKLNSFTAEMHLELREALERVERDD-ARALMLTGAGRGFCAGQDLSERNPTP-GGAPDLGRTI 78 (256)
T ss_pred CeEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCC-cEEEEEECCCCCcccCcCHHHHhhcc-ccchhHHHHH
Confidence 467889999999999999999999999999999999999999 99999999999999999999875321 1111111122
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHHHH
Q 018384 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 194 (357)
Q Consensus 116 ~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ 194 (357)
...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|+
T Consensus 79 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~~a~~l~ 158 (256)
T TIGR02280 79 ETFYNPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARAMGLA 158 (256)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHHHHHHHH
Confidence 22234567789999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCHHH
Q 018384 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE 274 (357)
Q Consensus 195 ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 274 (357)
++|++++++||+++|||++++|++++.+.+.
T Consensus 159 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------------- 189 (256)
T TIGR02280 159 MLGEKLDARTAASWGLIWQVVDDAALMDEAQ------------------------------------------------- 189 (256)
T ss_pred HcCCCCCHHHHHHcCCcceeeChHHHHHHHH-------------------------------------------------
Confidence 9999999999999999999999887765333
Q ss_pred HHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheecc
Q 018384 275 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN 354 (357)
Q Consensus 275 i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl~~ 354 (357)
+++++|++.||.+++.+|++++......++++++.|...+...+. ++|++||+++|+++
T Consensus 190 ------------------~~a~~la~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~k 248 (256)
T TIGR02280 190 ------------------ALAVHLAAQPTRGLALTKRAIQAAATNSLDTQLDLERDLQRELGR---SADYAEGVTAFLDK 248 (256)
T ss_pred ------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHHcC
Confidence 348899999999999999999988888899999999999988887 99999999999999
Q ss_pred CC
Q 018384 355 KH 356 (357)
Q Consensus 355 r~ 356 (357)
|+
T Consensus 249 r~ 250 (256)
T TIGR02280 249 RN 250 (256)
T ss_pred CC
Confidence 85
No 28
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.3e-53 Score=392.42 Aligned_cols=249 Identities=26% Similarity=0.354 Sum_probs=224.1
Q ss_pred CCCceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChH
Q 018384 32 LCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE 110 (357)
Q Consensus 32 ~~~~i~~~~-~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~ 110 (357)
..+.+.++. +++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++... ..
T Consensus 5 ~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~-- 79 (261)
T PRK08138 5 ATDVVLLERPADGVALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATA---GA-- 79 (261)
T ss_pred CCCCEEEEEccCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCeeCCcCHHHHhcc---ch--
Confidence 345678887 788999999999999999999999999999999999999999999999999999999987531 11
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-
Q 018384 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (357)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~- 189 (357)
...+......++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 80 -~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 158 (261)
T PRK08138 80 -IEMYLRHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKFK 158 (261)
T ss_pred -hHHHHHHHHHHHHHHHhCCCCEEEEEccEEEcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCHHH
Confidence 112334456678889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCC
Q 018384 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (357)
Q Consensus 190 a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (357)
+++|+++|++++++||+++|||++++|++++.+.+.
T Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------------- 194 (261)
T PRK08138 159 AMRMALTGCMVPAPEALAIGLVSEVVEDEQTLPRAL-------------------------------------------- 194 (261)
T ss_pred HHHHHHcCCCCCHHHHHHCCCCcEecCchHHHHHHH--------------------------------------------
Confidence 999999999999999999999999999888764333
Q ss_pred CCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 018384 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN 349 (357)
Q Consensus 270 ~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~ 349 (357)
+++++|++.+|.+++.+|++++.....++++++..|.+.+...+. ++|++||++
T Consensus 195 -----------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~i~ 248 (261)
T PRK08138 195 -----------------------ELAREIARMPPLALAQIKEVVLAGADAPLDAALALERKAFQLLFD---SEDQKEGMD 248 (261)
T ss_pred -----------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence 237888999999999999999988888999999999999988887 999999999
Q ss_pred heeccCC
Q 018384 350 FQILNKH 356 (357)
Q Consensus 350 afl~~r~ 356 (357)
+|+++|+
T Consensus 249 af~~kr~ 255 (261)
T PRK08138 249 AFLEKRK 255 (261)
T ss_pred HHhcCCC
Confidence 9999985
No 29
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.8e-53 Score=391.88 Aligned_cols=252 Identities=21% Similarity=0.273 Sum_probs=227.5
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHH
Q 018384 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (357)
Q Consensus 34 ~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (357)
..+.++++++|++|+||||++.|++|.+|+.+|.+++++++.|+++++|||+|.|++||+|.|++++..... .......
T Consensus 3 ~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~~G~Dl~~~~~~~~-~~~~~~~ 81 (260)
T PRK07511 3 AELLSRREGSTLVLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENRA-KPPSVQA 81 (260)
T ss_pred CeeEEEeECCEEEEEECCcccccCCCHHHHHHHHHHHHHhccCCCeEEEEEECCCCCcccCcCHHHHhhccc-ccchhHH
Confidence 457889999999999999999999999999999999999999999999999999999999999998754211 1122333
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHH
Q 018384 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (357)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (357)
.+...++.++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 82 ~~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ 161 (260)
T PRK07511 82 ASIDGLHDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQLATE 161 (260)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHHHHHH
Confidence 4556667888899999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCH
Q 018384 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (357)
Q Consensus 193 l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (357)
|+++|++++++||+++|||++++|++++.+.+.
T Consensus 162 l~ltg~~~~a~eA~~~Glv~~vv~~~~~~~~a~----------------------------------------------- 194 (260)
T PRK07511 162 LLLEGKPISAERLHALGVVNRLAEPGQALAEAL----------------------------------------------- 194 (260)
T ss_pred HHHhCCCCCHHHHHHcCCccEeeCchHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999887754332
Q ss_pred HHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018384 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 352 (357)
Q Consensus 273 e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl 352 (357)
+++++|++.+|.++..+|++++.....+++++++.|...+...+. ++|++||+++|+
T Consensus 195 --------------------~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~i~~f~ 251 (260)
T PRK07511 195 --------------------ALADQLAAGSPNALARIKSLIADAPEATLAAQLEAERDHFVASLH---HADALEGIAAFL 251 (260)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHh
Confidence 237889999999999999999998888999999999999999887 999999999999
Q ss_pred ccCC
Q 018384 353 LNKH 356 (357)
Q Consensus 353 ~~r~ 356 (357)
++|+
T Consensus 252 ~~r~ 255 (260)
T PRK07511 252 EKRA 255 (260)
T ss_pred ccCC
Confidence 9985
No 30
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.3e-53 Score=390.88 Aligned_cols=247 Identities=22% Similarity=0.273 Sum_probs=219.0
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHH
Q 018384 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 32 ~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
|.+.+.++++++|++|+||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++... .....
T Consensus 1 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~~~~ 77 (254)
T PRK08252 1 MSDEVLVERRGRVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFARG---ERPSI 77 (254)
T ss_pred CCceEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCceEcCcCHHHHhcc---cchhh
Confidence 345688999999999999999999999999999999999999999999999999999999999999987531 11111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-H
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (357)
....+..++ ...+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 78 ---~~~~~~~~~--~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a 152 (254)
T PRK08252 78 ---PGRGFGGLT--ERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIA 152 (254)
T ss_pred ---hHHHHHHHH--HhcCCCCEEEEECCEEehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCHHHH
Confidence 111122222 1469999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 191 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
++|+++|++++|+||+++|||++|+|++++.+.+.
T Consensus 153 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 187 (254)
T PRK08252 153 MELALTGDMLTAERAHELGLVNRLTEPGQALDAAL--------------------------------------------- 187 (254)
T ss_pred HHHHHcCCccCHHHHHHcCCcceecCcchHHHHHH---------------------------------------------
Confidence 99999999999999999999999999888764333
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 350 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~a 350 (357)
+++++|+..||.+++.+|++++.....+++++++.|...+...+. ++|++||+++
T Consensus 188 ----------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~eg~~a 242 (254)
T PRK08252 188 ----------------------ELAERIAANGPLAVAASKRIVVESGDWSEDEMFARQRELIAPVFT---SADAKEGATA 242 (254)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHH
Confidence 348899999999999999999988888899999999999988887 9999999999
Q ss_pred eeccCC
Q 018384 351 QILNKH 356 (357)
Q Consensus 351 fl~~r~ 356 (357)
|+++|+
T Consensus 243 f~~kr~ 248 (254)
T PRK08252 243 FAEKRA 248 (254)
T ss_pred HhcCCC
Confidence 999875
No 31
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.1e-53 Score=392.09 Aligned_cols=248 Identities=23% Similarity=0.302 Sum_probs=224.6
Q ss_pred ceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHH
Q 018384 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD 114 (357)
Q Consensus 35 ~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~ 114 (357)
.+.++++++|++||||||++ |++|.+|+.+|.++++.++.|+++++|||+|.|++||+|.|++++.... .......
T Consensus 3 ~i~~~~~~~v~~itl~rp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~---~~~~~~~ 78 (257)
T PRK07658 3 FLSVRVEDHVAVITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSVT---EAEQATE 78 (257)
T ss_pred eEEEEeeCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccC---chhhHHH
Confidence 67889999999999999985 9999999999999999999999999999999999999999999875321 1122233
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHHH
Q 018384 115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL 193 (357)
Q Consensus 115 ~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l 193 (357)
+......++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|
T Consensus 79 ~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l 158 (257)
T PRK07658 79 LAQLGQVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKAKALEM 158 (257)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHHHHHHH
Confidence 444556788899999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCHH
Q 018384 194 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273 (357)
Q Consensus 194 ~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 273 (357)
+++|++++++||+++||||+++|++++.+.+.
T Consensus 159 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------------ 190 (257)
T PRK07658 159 MLTSEPITGAEALKWGLVNGVFPEETLLDDAK------------------------------------------------ 190 (257)
T ss_pred HHcCCCcCHHHHHHcCCcCeecChhHHHHHHH------------------------------------------------
Confidence 99999999999999999999999888764333
Q ss_pred HHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheec
Q 018384 274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQIL 353 (357)
Q Consensus 274 ~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl~ 353 (357)
+++++|++.||.+++.+|++++.....+++++++.|...+...+. ++|++||+++|++
T Consensus 191 -------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~egi~af~~ 248 (257)
T PRK07658 191 -------------------KLAKKIAGKSPATTRAVLELLQTTKSSSYYEGVKREAKIFGEVFT---SEDAKEGVQAFLE 248 (257)
T ss_pred -------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHc
Confidence 348899999999999999999988888999999999999999887 9999999999999
Q ss_pred cCC
Q 018384 354 NKH 356 (357)
Q Consensus 354 ~r~ 356 (357)
+|+
T Consensus 249 kr~ 251 (257)
T PRK07658 249 KRK 251 (257)
T ss_pred CCC
Confidence 885
No 32
>PLN02600 enoyl-CoA hydratase
Probab=100.00 E-value=1.8e-53 Score=390.74 Aligned_cols=242 Identities=24% Similarity=0.319 Sum_probs=220.1
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCChHHHHHHHHHH
Q 018384 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (357)
Q Consensus 41 ~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (357)
+++|++||||||++.|+||.+|+.+|.+++++++.|+++++|||||.| ++||+|+|++++... .......+...+
T Consensus 2 ~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~ 77 (251)
T PLN02600 2 DSGIVELRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKM----SPSEVQKFVNSL 77 (251)
T ss_pred CCcEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhcc----ChHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999984 899999999987531 122233455556
Q ss_pred HHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHHHHhcCC
Q 018384 120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGA 198 (357)
Q Consensus 120 ~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~ 198 (357)
..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|++||+
T Consensus 78 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~ 157 (251)
T PLN02600 78 RSTFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGR 157 (251)
T ss_pred HHHHHHHHhCCCCEEEEecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCHHHHHHHHHhCC
Confidence 6788889999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCHHHHHHH
Q 018384 199 KLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDS 278 (357)
Q Consensus 199 ~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~i~~~ 278 (357)
+++++||+++||||+++|++++.+.+.
T Consensus 158 ~~~a~eA~~~Glv~~vv~~~~~~~~a~----------------------------------------------------- 184 (251)
T PLN02600 158 RIGAREAASMGLVNYCVPAGEAYEKAL----------------------------------------------------- 184 (251)
T ss_pred ccCHHHHHHcCCCcEeeChhHHHHHHH-----------------------------------------------------
Confidence 999999999999999999888754332
Q ss_pred HhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheeccCC
Q 018384 279 LESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 356 (357)
Q Consensus 279 l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl~~r~ 356 (357)
+++++|++.||.+++.+|++++.....++++.++.|...+...+. ++|++||+++|+++|+
T Consensus 185 --------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~ekr~ 245 (251)
T PLN02600 185 --------------ELAQEINQKGPLAIKMAKKAINEGSEVDMASGLEIEEECYEQVLK---TKDRLEGLAAFAEKRK 245 (251)
T ss_pred --------------HHHHHHHhCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhcCCC
Confidence 348999999999999999999988888999999999999999887 9999999999999985
No 33
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.9e-53 Score=391.44 Aligned_cols=254 Identities=20% Similarity=0.268 Sum_probs=225.6
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCC-CceEEEEecCCCccccccChHHHHHhhccC--Ch
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDP-NIGFVSMKGSGRAFCAGGDIVSLYHFMNQG--KL 109 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~-~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~--~~ 109 (357)
++.+.++++++|++|+||||++.|++|.+|+.+|.++++.++.|+ ++++|||||.|++||+|+|++++....... ..
T Consensus 3 ~~~v~~~~~~~i~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 82 (266)
T PRK05981 3 FKKVTLDFDGGVAILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESDSGG 82 (266)
T ss_pred cceEEEEeECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcccccCHHhhhcccccccccc
Confidence 567899999999999999999999999999999999999999876 499999999999999999999875321100 00
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH
Q 018384 110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 189 (357)
Q Consensus 110 ~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~ 189 (357)
.....+...++.++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~vg~~ 162 (266)
T PRK05981 83 DAGAALETAYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKA 162 (266)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHhHHH
Confidence 11223334456788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcC
Q 018384 190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 268 (357)
Q Consensus 190 -a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (357)
+++|+++|++++|+||+++|||++++|++++.+.+.
T Consensus 163 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~~~~~a~------------------------------------------- 199 (266)
T PRK05981 163 RAMELSLLGEKLPAETALQWGLVNRVVDDAELMAEAM------------------------------------------- 199 (266)
T ss_pred HHHHHHHhCCCcCHHHHHHcCCceEeeCHhHHHHHHH-------------------------------------------
Confidence 999999999999999999999999999888764333
Q ss_pred CCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhh
Q 018384 269 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVS 348 (357)
Q Consensus 269 ~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi 348 (357)
+++++|+..||.++..+|++++.....++.++++.|...+...+. ++|++||+
T Consensus 200 ------------------------~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~e~~ 252 (266)
T PRK05981 200 ------------------------KLAHELANGPTVALGLIRKLYWDSPENDFEEQLNLEREAQRIAGK---TEDFKEGV 252 (266)
T ss_pred ------------------------HHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhc---ChhHHHHH
Confidence 348889999999999999999988888999999999999888887 99999999
Q ss_pred hheeccCC
Q 018384 349 NFQILNKH 356 (357)
Q Consensus 349 ~afl~~r~ 356 (357)
.+|+++|+
T Consensus 253 ~af~~kr~ 260 (266)
T PRK05981 253 GAFLQKRP 260 (266)
T ss_pred HHHhcCCC
Confidence 99999986
No 34
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.3e-53 Score=390.41 Aligned_cols=252 Identities=22% Similarity=0.309 Sum_probs=221.5
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHH
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (357)
++.+.++++++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++....... ....
T Consensus 3 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~ 81 (262)
T PRK05995 3 YETLEIEQRGQVATVTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYS-DDEN 81 (262)
T ss_pred CceEEEEeeCCEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCccccCcCHHHHhhhcccC-chhh
Confidence 456889999999999999999999999999999999999999999999999999999999999999875321111 1111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HH
Q 018384 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (357)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (357)
......+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++ +++++|.. ++
T Consensus 82 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~-l~~~vg~~~a~ 160 (262)
T PRK05995 82 RADARRLADMLRAIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISPY-VIRAMGERAAR 160 (262)
T ss_pred hhHHHHHHHHHHHHHcCCCCEEEEECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHHH-HHHHhCHHHHH
Confidence 12233456778889999999999999999999999999999999999999999999999999887754 88999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCC
Q 018384 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (357)
Q Consensus 192 ~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
+|+++|++++|+||+++|||++|+|++++.+.+.
T Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 194 (262)
T PRK05995 161 RYFLTAERFDAAEALRLGLVHEVVPAEALDAKVD---------------------------------------------- 194 (262)
T ss_pred HHHHcCCccCHHHHHHcCCCCeecCHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999887765443
Q ss_pred HHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHH-HHHHHHHHHHhhhcCCCCChhhhhhh
Q 018384 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDEC-LVREYRMSLQGVSRLISGDFYEVSNF 350 (357)
Q Consensus 272 ~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~-l~~e~~~~~~~~~~~~s~d~~egi~a 350 (357)
+++++|++.||.+++.+|++++.....++.+. ++.|...+...+. ++|++||+++
T Consensus 195 ---------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~~a 250 (262)
T PRK05995 195 ---------------------ELLAALVANSPQAVRAGKRLVRDVAGRPIDAALIADTASRIALIRA---TEEAREGVAA 250 (262)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 34889999999999999999998878888888 8888888878777 9999999999
Q ss_pred eeccCC
Q 018384 351 QILNKH 356 (357)
Q Consensus 351 fl~~r~ 356 (357)
|+++|+
T Consensus 251 f~~kr~ 256 (262)
T PRK05995 251 FLEKRK 256 (262)
T ss_pred HhcCCC
Confidence 999985
No 35
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=7.7e-53 Score=388.46 Aligned_cols=247 Identities=24% Similarity=0.299 Sum_probs=216.9
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCChHH
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
++.+.++++++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..... ....
T Consensus 3 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~--~~~~ 80 (259)
T PRK06494 3 LPFSTVERKGHVTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGGK--RGWP 80 (259)
T ss_pred CceeEEEeECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcCc--chhh
Confidence 46788999999999999999999999999999999999999999999999999998 79999999998753211 1111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-H
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (357)
. ..+..+ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 81 ~----~~~~~~-~~~~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a 155 (259)
T PRK06494 81 E----SGFGGL-TSRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRA 155 (259)
T ss_pred h----HHHHHH-HHHhcCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCHHHH
Confidence 1 112222 334589999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 191 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
++|+++|++++|+||+++||||+++|++++.+.+.
T Consensus 156 ~~lll~g~~~~a~eA~~~GLv~~vv~~~~l~~~a~--------------------------------------------- 190 (259)
T PRK06494 156 MGMILTGRRVTAREGLELGFVNEVVPAGELLAAAE--------------------------------------------- 190 (259)
T ss_pred HHHHHcCCcCCHHHHHHcCCCcEecCHhHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999887765433
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHH--HHHHHHhhhcCCCCChhhhh
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVRE--YRMSLQGVSRLISGDFYEVS 348 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e--~~~~~~~~~~~~s~d~~egi 348 (357)
+++++|+..||.+++.+|++++.....+++++++.| ...+...+. ++|++||+
T Consensus 191 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~d~~eg~ 245 (259)
T PRK06494 191 ----------------------RWADDILACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAVEARRA---SQDYIEGP 245 (259)
T ss_pred ----------------------HHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc---CccHHHHH
Confidence 348899999999999999999988888899999998 456667776 99999999
Q ss_pred hheeccCC
Q 018384 349 NFQILNKH 356 (357)
Q Consensus 349 ~afl~~r~ 356 (357)
++|+++|+
T Consensus 246 ~af~~kr~ 253 (259)
T PRK06494 246 KAFAEKRP 253 (259)
T ss_pred HHHHccCC
Confidence 99999875
No 36
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8e-53 Score=388.56 Aligned_cols=248 Identities=21% Similarity=0.278 Sum_probs=224.8
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHH
Q 018384 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (357)
Q Consensus 34 ~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (357)
+.+.++++++|++||||||++.|++|.+|+.+|.++++.+ .|+++++|||+|.|++||+|+|++++... .......
T Consensus 6 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~-~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~---~~~~~~~ 81 (260)
T PRK07659 6 ESVVVKYEGRVATIMLNRPEALNALDEPMLKELLQALKEV-AESSAHIVVLRGNGRGFSAGGDIKMMLSS---NDESKFD 81 (260)
T ss_pred ceEEEEeeCCEEEEEeCCcccccCCCHHHHHHHHHHHHHh-cCCCeeEEEEECCCCCcccccCHHHHhhc---cCchhHH
Confidence 4689999999999999999999999999999999999999 58899999999999999999999987532 1122334
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHH
Q 018384 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (357)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (357)
.+...++.++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 82 ~~~~~~~~~~~~l~~~~~pvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~~a~~ 161 (260)
T PRK07659 82 GVMNTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGENKAKQ 161 (260)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHHHHHH
Confidence 4556667788899999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCH
Q 018384 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (357)
Q Consensus 193 l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (357)
|+++|++++|+||+++||||+++ ++++.+.+.
T Consensus 162 l~ltg~~~~a~eA~~~Glv~~vv-~~~~~~~a~----------------------------------------------- 193 (260)
T PRK07659 162 IIWEGKKLSATEALDLGLIDEVI-GGDFQTAAK----------------------------------------------- 193 (260)
T ss_pred HHHhCCccCHHHHHHcCChHHHh-hhHHHHHHH-----------------------------------------------
Confidence 99999999999999999999999 677654333
Q ss_pred HHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018384 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 352 (357)
Q Consensus 273 e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl 352 (357)
+++++|++.||.+++.+|++++.....++++.++.|...+...+. ++|++||+++|+
T Consensus 194 --------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af~ 250 (260)
T PRK07659 194 --------------------QKISEWLQKPLKAMIETKQIYCELNRSQLEQVLQLEKRAQYAMRQ---TADHKEGIRAFL 250 (260)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CHhHHHHHHHHh
Confidence 348899999999999999999988888999999999999988887 999999999999
Q ss_pred ccCC
Q 018384 353 LNKH 356 (357)
Q Consensus 353 ~~r~ 356 (357)
++|+
T Consensus 251 ~kr~ 254 (260)
T PRK07659 251 EKRL 254 (260)
T ss_pred cCCC
Confidence 9985
No 37
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5e-53 Score=387.57 Aligned_cols=247 Identities=22% Similarity=0.315 Sum_probs=220.9
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHH
Q 018384 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 32 ~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
|++.+.++++++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++...... .
T Consensus 1 m~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~-~--- 76 (249)
T PRK05870 1 MMDPVLLDVDDGVALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAPGR-P--- 76 (249)
T ss_pred CCccEEEEccCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCeecCcChHHHhccccc-c---
Confidence 456688999999999999999999999999999999999999999999999999999999999999987542111 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-H
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (357)
.......+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 77 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a 156 (249)
T PRK05870 77 AEDGLRRIYDGFLAVASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQVA 156 (249)
T ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEECCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCHHHH
Confidence 122334455667789999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 191 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
++|++||++++|+||+++|||++++ +++.+.+.
T Consensus 157 ~~l~ltg~~~~a~eA~~~Glv~~vv--~~l~~~a~--------------------------------------------- 189 (249)
T PRK05870 157 RAALLFGMRFDAEAAVRHGLALMVA--DDPVAAAL--------------------------------------------- 189 (249)
T ss_pred HHHHHhCCccCHHHHHHcCCHHHHH--hhHHHHHH---------------------------------------------
Confidence 9999999999999999999999999 45554333
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhc-CCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTFDECLVREYRMSLQGVSRLISGDFYEVSN 349 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~-~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~ 349 (357)
+++++|++.||.+++.+|++++.... .+++++++.|...+...+. ++|++||++
T Consensus 190 ----------------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~ 244 (249)
T PRK05870 190 ----------------------ELAAGPAAAPRELVLATKASMRATASLAQHAAAVEFELGPQAASVQ---SPEFAARLA 244 (249)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHhc---ChhHHHHHH
Confidence 34899999999999999999998877 8899999999999888887 999999999
Q ss_pred heecc
Q 018384 350 FQILN 354 (357)
Q Consensus 350 afl~~ 354 (357)
+|+++
T Consensus 245 af~~~ 249 (249)
T PRK05870 245 AAQRR 249 (249)
T ss_pred HHhcC
Confidence 99874
No 38
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-52 Score=387.53 Aligned_cols=252 Identities=19% Similarity=0.243 Sum_probs=219.8
Q ss_pred CCceEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHH
Q 018384 33 CNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 33 ~~~i~~~~~-~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
++.+.++++ ++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++...... ....
T Consensus 3 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~-~~~~ 81 (262)
T PRK07468 3 FETIRIAVDARGVATLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTA-DRAT 81 (262)
T ss_pred cceEEEEEcCCcEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCcCHHHHHhhccc-chhh
Confidence 456788886 68999999999999999999999999999999999999999999999999999999987532111 1111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-H
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (357)
.......+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++++ ++|.. +
T Consensus 82 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~~~-~vG~~~a 160 (262)
T PRK07468 82 RIEEARRLAMMLKALNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVVA-RMGEANA 160 (262)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhhHHh-hccHHHH
Confidence 112233456678899999999999999999999999999999999999999999999999999999988654 58998 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 191 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
++|+++|++++|+||+++|||++++|++++.+.+.
T Consensus 161 ~~lll~g~~~~a~eA~~~Glv~~v~~~~~l~~~~~--------------------------------------------- 195 (262)
T PRK07468 161 RRVFMSARLFDAEEAVRLGLLSRVVPAERLDAAVE--------------------------------------------- 195 (262)
T ss_pred HHHHHhCCccCHHHHHHcCCcceecCHHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999877754333
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 350 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~a 350 (357)
+++++|++.+|.++..+|++++......++++++.|...+...+. ++|++||+++
T Consensus 196 ----------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~e~~~a 250 (262)
T PRK07468 196 ----------------------AEVTPYLSCAPGAVAAAKALVRALGAPIDEAVIDATIEALADTWE---TEEAREGIAA 250 (262)
T ss_pred ----------------------HHHHHHHhcCHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 238899999999999999999987666789999999999888887 9999999999
Q ss_pred eeccCC
Q 018384 351 QILNKH 356 (357)
Q Consensus 351 fl~~r~ 356 (357)
|+++|+
T Consensus 251 f~~kr~ 256 (262)
T PRK07468 251 FFDKRA 256 (262)
T ss_pred HHcCCC
Confidence 999985
No 39
>PLN02888 enoyl-CoA hydratase
Probab=100.00 E-value=1.2e-52 Score=387.92 Aligned_cols=252 Identities=21% Similarity=0.267 Sum_probs=221.1
Q ss_pred ccCCCceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCC
Q 018384 30 DDLCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108 (357)
Q Consensus 30 ~~~~~~i~~~~-~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~ 108 (357)
+...+.+.++. +++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++.... ...
T Consensus 5 ~~~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~ 83 (265)
T PLN02888 5 TVSENLILVPKSRNGIATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDLTAAEEVF-KGD 83 (265)
T ss_pred cCCCCeEEEEeccCCEEEEEEcCCCcccCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCcccCCCCHHHHHhhc-cch
Confidence 44456788886 7899999999999999999999999999999999999999999999999999999999864321 111
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChH
Q 018384 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188 (357)
Q Consensus 109 ~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~ 188 (357)
.. .....++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus 84 ---~~---~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~ 157 (265)
T PLN02888 84 ---VK---DVETDPVAQMERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGA 157 (265)
T ss_pred ---hh---HHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCH
Confidence 11 112345667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHc
Q 018384 189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF 267 (357)
Q Consensus 189 ~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (357)
. +++|+++|++++|+||+++|||+++||++++.+.+.
T Consensus 158 ~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------ 195 (265)
T PLN02888 158 NRAREVSLTAMPLTAETAERWGLVNHVVEESELLKKAR------------------------------------------ 195 (265)
T ss_pred HHHHHHHHhCCccCHHHHHHcCCccEeeChHHHHHHHH------------------------------------------
Confidence 9 999999999999999999999999999887754333
Q ss_pred CCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhh
Q 018384 268 GLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEV 347 (357)
Q Consensus 268 ~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~eg 347 (357)
+++++|++.+|.+++.+|++++.....+++++++.|...+...+. ..++|++||
T Consensus 196 -------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~-~~~~d~~e~ 249 (265)
T PLN02888 196 -------------------------EVAEAIIKNNQGMVLRYKSVINDGLKLDLGHALQLEKERAHDYYN-GMTKEQFQK 249 (265)
T ss_pred -------------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc-cCCHHHHHH
Confidence 348999999999999999999988888999999999887766641 138999999
Q ss_pred hhheeccCC
Q 018384 348 SNFQILNKH 356 (357)
Q Consensus 348 i~afl~~r~ 356 (357)
+++|+++|+
T Consensus 250 ~~af~ekr~ 258 (265)
T PLN02888 250 MQEFIAGRS 258 (265)
T ss_pred HHHHHhcCC
Confidence 999999985
No 40
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=100.00 E-value=7.7e-53 Score=389.44 Aligned_cols=252 Identities=21% Similarity=0.228 Sum_probs=217.7
Q ss_pred CCceEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHH
Q 018384 33 CNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 33 ~~~i~~~~~-~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
++.+.++++ ++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++.... +.+...
T Consensus 4 ~~~l~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~-~~~~~~ 82 (265)
T PRK05674 4 FQTIELIRDPRGFATLWLSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSA-DLDYNT 82 (265)
T ss_pred cceEEEEEcCCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhcc-cccchh
Confidence 567889885 789999999999999999999999999999999999999999999999999999999875321 101111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-H
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (357)
.......+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++ ++++++|.. +
T Consensus 83 ~~~~~~~~~~~~~~l~~~~kPvIaaV~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~-~l~~~vG~~~a 161 (265)
T PRK05674 83 NLDDARELAELMYNLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISP-FVVKAIGERAA 161 (265)
T ss_pred hhHHHHHHHHHHHHHHcCCCCEEEEEcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHH-HHHHHhCHHHH
Confidence 11122345567888999999999999999999999999999999999999999999999999988765 488999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 191 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
++|++||+.++|+||+++|||++|+|++++.+.+.
T Consensus 162 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 196 (265)
T PRK05674 162 RRYALTAERFDGRRARELGLLAESYPAAELEAQVE--------------------------------------------- 196 (265)
T ss_pred HHHHHhCcccCHHHHHHCCCcceecCHHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999877765433
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHH-HHHHHHHhhhcCCCCChhhhhh
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVR-EYRMSLQGVSRLISGDFYEVSN 349 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~-e~~~~~~~~~~~~s~d~~egi~ 349 (357)
+++++|+++||.+++.+|++++.....+++++++. +...+...+. ++|++||++
T Consensus 197 ----------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~---s~d~~e~~~ 251 (265)
T PRK05674 197 ----------------------AWIANLLLNSPQALRASKDLLREVGDGELSPALRRYCENAIARIRV---SAEGQEGLR 251 (265)
T ss_pred ----------------------HHHHHHHhcCHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence 34889999999999999999999888888888875 4456666665 999999999
Q ss_pred heeccCC
Q 018384 350 FQILNKH 356 (357)
Q Consensus 350 afl~~r~ 356 (357)
+|+++|+
T Consensus 252 af~~kr~ 258 (265)
T PRK05674 252 AFLEKRT 258 (265)
T ss_pred HHHccCC
Confidence 9999986
No 41
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-52 Score=390.46 Aligned_cols=254 Identities=26% Similarity=0.326 Sum_probs=222.5
Q ss_pred CCceEEEEeC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChH-
Q 018384 33 CNQVLVEGKA-NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE- 110 (357)
Q Consensus 33 ~~~i~~~~~~-~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~- 110 (357)
++.+.+++++ +|++||||||++.|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++..........
T Consensus 4 ~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~ 83 (272)
T PRK06210 4 YDAVLYEVADSGVAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDGRRD 83 (272)
T ss_pred cceEEEEECCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHhccCCCeeEEEEECCCCCcccccCHHHHhccCccccccc
Confidence 4668899998 99999999999999999999999999999999999999999999999999999999875421100000
Q ss_pred -HHHHH----HHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhc
Q 018384 111 -ECKDF----FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL 185 (357)
Q Consensus 111 -~~~~~----~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~ 185 (357)
....+ ...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ 163 (272)
T PRK06210 84 TDVRPFVGNRRPDYQTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRL 163 (272)
T ss_pred ccchhhhhhhhhhHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhhhHhh
Confidence 00011 1123456678899999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHH
Q 018384 186 PGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVD 264 (357)
Q Consensus 186 ~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (357)
+|.. +++|+++|++++|+||+++||||+++|++++.+.+.
T Consensus 164 ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------- 204 (272)
T PRK06210 164 VGHANALDLLLSARTFYAEEALRLGLVNRVVPPDELMERTL--------------------------------------- 204 (272)
T ss_pred hCHHHHHHHHHcCCccCHHHHHHcCCcceecCHHHHHHHHH---------------------------------------
Confidence 9999 999999999999999999999999999877754333
Q ss_pred HHcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhc-CchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCC
Q 018384 265 KCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEA-SPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGD 343 (357)
Q Consensus 265 ~~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~-~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d 343 (357)
+++++|++. +|.++..+|++++.....+++++++.|...+...+. ++|
T Consensus 205 ----------------------------~~a~~i~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~ 253 (272)
T PRK06210 205 ----------------------------AYAEDLARNVSPASMAVIKRQLYEDAFQTLAEATARANREMHESLQ---RPD 253 (272)
T ss_pred ----------------------------HHHHHHHhcCCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHhc---Ccc
Confidence 347889985 999999999999998888999999999999888887 999
Q ss_pred hhhhhhheeccCC
Q 018384 344 FYEVSNFQILNKH 356 (357)
Q Consensus 344 ~~egi~afl~~r~ 356 (357)
++||+++|+++|+
T Consensus 254 ~~egi~af~~kr~ 266 (272)
T PRK06210 254 FIEGVASFLEKRP 266 (272)
T ss_pred HHHHHHHHhccCC
Confidence 9999999999985
No 42
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1e-52 Score=385.88 Aligned_cols=245 Identities=21% Similarity=0.270 Sum_probs=217.6
Q ss_pred CceEEEEeCC---EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChH
Q 018384 34 NQVLVEGKAN---SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE 110 (357)
Q Consensus 34 ~~i~~~~~~~---v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~ 110 (357)
+.+.++++++ |++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|.|++++..... ..
T Consensus 3 ~~i~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~--~~- 79 (251)
T PRK06023 3 DHILVERPGAHPGVQVIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAAM--GG- 79 (251)
T ss_pred ceEEEEeecCcCcEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcCHHHHhhccc--cc-
Confidence 4588888774 99999999999999999999999999999999999999999999999999999998754211 11
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-
Q 018384 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (357)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~- 189 (357)
..+...+..++..+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|..
T Consensus 80 --~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~ 157 (251)
T PRK06023 80 --TSFGSEILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQR 157 (251)
T ss_pred --hhhHHHHHHHHHHHHhCCCCEEEEeCCceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhHHH
Confidence 11223445678889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCC
Q 018384 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (357)
Q Consensus 190 a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (357)
+++++++|++++++||+++|||++++|++++.+.+.
T Consensus 158 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------------- 193 (251)
T PRK06023 158 AFALLALGEGFSAEAAQEAGLIWKIVDEEAVEAETL-------------------------------------------- 193 (251)
T ss_pred HHHHHHhCCCCCHHHHHHcCCcceeeCHHHHHHHHH--------------------------------------------
Confidence 999999999999999999999999999888765433
Q ss_pred CCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 018384 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN 349 (357)
Q Consensus 270 ~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~ 349 (357)
+++++|+..||.+++.+|++++... ..+++.++.|...+...+. ++|++||++
T Consensus 194 -----------------------~~a~~l~~~~~~a~~~~K~~l~~~~-~~l~~~~~~e~~~~~~~~~---~~~~~e~~~ 246 (251)
T PRK06023 194 -----------------------KAAEELAAKPPQALQIARDLMRGPR-EDILARIDEEAKHFAARLK---SAEARAAFE 246 (251)
T ss_pred -----------------------HHHHHHHhCCHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHhC---CHHHHHHHH
Confidence 3489999999999999999998763 4688999999888888887 999999999
Q ss_pred heecc
Q 018384 350 FQILN 354 (357)
Q Consensus 350 afl~~ 354 (357)
+|+++
T Consensus 247 af~e~ 251 (251)
T PRK06023 247 AFMRR 251 (251)
T ss_pred HHhcC
Confidence 99874
No 43
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=100.00 E-value=1.7e-52 Score=386.63 Aligned_cols=248 Identities=20% Similarity=0.276 Sum_probs=218.6
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCChHH
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
.+.+.++++++|++||||||+ .|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++.... ....
T Consensus 2 ~~~i~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~~--~~~~- 77 (261)
T PRK03580 2 SESLHTTRNGSILEITLDRPK-ANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGE--APDA- 77 (261)
T ss_pred CceEEEEEECCEEEEEECCcc-ccCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhccC--cchh-
Confidence 446899999999999999996 5999999999999999999999999999999999 7999999999875321 1111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-H
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (357)
.+.......+.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 78 --~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~~a 155 (261)
T PRK03580 78 --DFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIA 155 (261)
T ss_pred --hhhhhhhHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCHHHH
Confidence 1111223456788899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 191 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
++++++|++++|+||+++|||++++|++++.+.+..
T Consensus 156 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~-------------------------------------------- 191 (261)
T PRK03580 156 NEMVMTGRRMDAEEALRWGIVNRVVPQAELMDRARE-------------------------------------------- 191 (261)
T ss_pred HHHHHhCCccCHHHHHHcCCCcEecCHhHHHHHHHH--------------------------------------------
Confidence 999999999999999999999999998887654433
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHH----HHHHhhhcCCCCChhh
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYR----MSLQGVSRLISGDFYE 346 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~----~~~~~~~~~~s~d~~e 346 (357)
++++|++.+|.+++.+|++++.....+++++++.|.. .+...+. ++|++|
T Consensus 192 -----------------------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~---~~d~~e 245 (261)
T PRK03580 192 -----------------------LAQQLVNSAPLAIAALKEIYRETSEMPVEEAYRYIRSGVLKHYPSVLH---SEDALE 245 (261)
T ss_pred -----------------------HHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHhc---CccHHH
Confidence 3889999999999999999998888899999998874 5566666 999999
Q ss_pred hhhheeccCC
Q 018384 347 VSNFQILNKH 356 (357)
Q Consensus 347 gi~afl~~r~ 356 (357)
|+++|+++|+
T Consensus 246 ~~~af~ekr~ 255 (261)
T PRK03580 246 GPRAFAEKRD 255 (261)
T ss_pred HHHHHhcCCC
Confidence 9999999985
No 44
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9.6e-53 Score=386.47 Aligned_cols=248 Identities=23% Similarity=0.236 Sum_probs=216.4
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHH
Q 018384 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 32 ~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
|.+.+.++++++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++.... . ..
T Consensus 1 ~~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~FcaG~Dl~~~~~~~--~--~~ 76 (254)
T PRK08259 1 MSMSVRVERNGPVTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAVGTGR--G--NR 76 (254)
T ss_pred CCceEEEEEECCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcChHHHhccc--c--hh
Confidence 4566899999999999999999999999999999999999999999999999999999999999999875321 1 11
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-H
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (357)
.... ....+...+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.+|++++|++++|.. +
T Consensus 77 ~~~~--~~~~~~~~~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a 154 (254)
T PRK08259 77 LHPS--GDGPMGPSRMRLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRA 154 (254)
T ss_pred hhhh--hcchhhhHHhcCCCCEEEEECCEEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCHHHH
Confidence 1100 001112233479999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 191 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
++|+++|+.++|+||+++||||+|+|++++.+.+.
T Consensus 155 ~~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 189 (254)
T PRK08259 155 MDLILTGRPVDADEALAIGLANRVVPKGQARAAAE--------------------------------------------- 189 (254)
T ss_pred HHHHHcCCccCHHHHHHcCCCCEeeChhHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999988865443
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 350 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~a 350 (357)
+++++|++.||.+++.+|++++.....+++++++.|...+...+ .+|++||+++
T Consensus 190 ----------------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~----~~d~~egi~a 243 (254)
T PRK08259 190 ----------------------ELAAELAAFPQTCLRADRLSALEQWGLPEEAALANEFAHGLAVL----AAEALEGAAR 243 (254)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH----hhHHHHHHHH
Confidence 34889999999999999999998888889999999988766655 4999999999
Q ss_pred eeccCC
Q 018384 351 QILNKH 356 (357)
Q Consensus 351 fl~~r~ 356 (357)
|+++|.
T Consensus 244 f~~~~~ 249 (254)
T PRK08259 244 FAAGAG 249 (254)
T ss_pred HHhhhc
Confidence 999874
No 45
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-52 Score=386.62 Aligned_cols=249 Identities=27% Similarity=0.365 Sum_probs=226.6
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHH
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (357)
...+.++++++|++|+||||++.|++|.+|+.+|.+++++++.|+++++|||+|.|++||+|+|++++.... ...
T Consensus 4 ~~~i~~~~~~~v~~i~lnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~--~~~--- 78 (259)
T PRK06688 4 VTDLLVELEDGVLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAP--PKP--- 78 (259)
T ss_pred CCceEEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCccCHHHHhccC--cch---
Confidence 456889999999999999999899999999999999999999999999999999999999999999875421 111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HH
Q 018384 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (357)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (357)
..+...++.++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. +.
T Consensus 79 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~ 158 (259)
T PRK06688 79 PDELAPVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRARAA 158 (259)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhHHHHH
Confidence 23445567788899999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCC
Q 018384 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (357)
Q Consensus 192 ~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
+|+++|++++++||+++|||++++|++++.+.+.
T Consensus 159 ~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~---------------------------------------------- 192 (259)
T PRK06688 159 EMLLLGEPLSAEEALRIGLVNRVVPAAELDAEAD---------------------------------------------- 192 (259)
T ss_pred HHHHhCCccCHHHHHHcCCcceecCHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999877764333
Q ss_pred HHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018384 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 351 (357)
Q Consensus 272 ~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~af 351 (357)
+++++|++.+|.+++.+|++++.....+++++++.|...+...+. ++|+++|+++|
T Consensus 193 ---------------------~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~af 248 (259)
T PRK06688 193 ---------------------AQAAKLAAGPASALRYTKRAINAATLTELEEALAREAAGFGRLLR---TPDFREGATAF 248 (259)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHH
Confidence 347889999999999999999998888999999999999999887 99999999999
Q ss_pred eccCC
Q 018384 352 ILNKH 356 (357)
Q Consensus 352 l~~r~ 356 (357)
+++|+
T Consensus 249 ~~~~~ 253 (259)
T PRK06688 249 IEKRK 253 (259)
T ss_pred HcCCC
Confidence 99875
No 46
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=100.00 E-value=2.1e-52 Score=384.74 Aligned_cols=246 Identities=18% Similarity=0.192 Sum_probs=210.9
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCChHHH
Q 018384 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC 112 (357)
Q Consensus 34 ~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (357)
+.+.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++... ....
T Consensus 2 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~--~~~~--- 76 (256)
T TIGR03210 2 EDILYEKRNGIAWIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGG--YDGR--- 76 (256)
T ss_pred CceEEEeeCCEEEEEEcCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhcc--ccch---
Confidence 4588899999999999999999999999999999999999999999999999999 799999999987421 1111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HH
Q 018384 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (357)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (357)
..+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|.. |+
T Consensus 77 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~~~A~ 156 (256)
T TIGR03210 77 GTIGLPMEELHSAIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEKKAR 156 (256)
T ss_pred hHHHHHHHHHHHHHHhCCCCEEEEECCEEehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCHHHHH
Confidence 11223345678889999999999999999999999999999999999999999999999998888899999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCC
Q 018384 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (357)
Q Consensus 192 ~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
+|+++|++++|+||+++|||++++|++++.+.+.
T Consensus 157 ~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 190 (256)
T TIGR03210 157 EIWYLCRRYTAQEALAMGLVNAVVPHDQLDAEVQ---------------------------------------------- 190 (256)
T ss_pred HHHHhCCCcCHHHHHHcCCceeeeCHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999888765443
Q ss_pred HHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCH-HHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018384 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTF-DECLVREYRMSLQGVSRLISGDFYEVSNF 350 (357)
Q Consensus 272 ~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l-~~~l~~e~~~~~~~~~~~~s~d~~egi~a 350 (357)
+++++|++.||.+++.+|++++....... .+. .|...+...+. ++|++||+++
T Consensus 191 ---------------------~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~--~~~~~~~~~~~---~~d~~e~~~a 244 (256)
T TIGR03210 191 ---------------------KWCDEIVEKSPTAIAIAKRSFNMDTAHQRGIAG--MGMYALKLYYD---TAESREGVKA 244 (256)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHhhcccchHHH--HHHHHHHHHcc---ChhHHHHHHH
Confidence 34899999999999999999987644321 112 23345555565 9999999999
Q ss_pred eeccCC
Q 018384 351 QILNKH 356 (357)
Q Consensus 351 fl~~r~ 356 (357)
|+++|+
T Consensus 245 f~~kr~ 250 (256)
T TIGR03210 245 FQEKRK 250 (256)
T ss_pred HhccCC
Confidence 999986
No 47
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.9e-52 Score=385.61 Aligned_cols=252 Identities=23% Similarity=0.236 Sum_probs=221.7
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHH
Q 018384 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 32 ~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
|++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.... ......
T Consensus 1 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~~~~~~ 79 (262)
T PRK07509 1 MMDRVSVTIEDGIADVRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSP-GNAVKL 79 (262)
T ss_pred CCceEEEEeeCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCcCCCcCHHHHhccc-chhhhh
Confidence 5678999999999999999999999999999999999999999999999999999999999999999875421 111111
Q ss_pred HHH----HHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcCh
Q 018384 112 CKD----FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 187 (357)
Q Consensus 112 ~~~----~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g 187 (357)
... ....+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g 159 (262)
T PRK07509 80 LFKRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVR 159 (262)
T ss_pred HhhhhHHHHHHHHHHHHHHHhCCCCEEEEECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhC
Confidence 111 1123345667788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHH
Q 018384 188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 266 (357)
Q Consensus 188 ~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (357)
.. +++|+++|++++|+||+++|||++++++ +.+.+.
T Consensus 160 ~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~--~~~~a~----------------------------------------- 196 (262)
T PRK07509 160 KDVARELTYTARVFSAEEALELGLVTHVSDD--PLAAAL----------------------------------------- 196 (262)
T ss_pred HHHHHHHHHcCCCcCHHHHHHcCChhhhhch--HHHHHH-----------------------------------------
Confidence 99 9999999999999999999999999953 332222
Q ss_pred cCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhh
Q 018384 267 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 346 (357)
Q Consensus 267 ~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~e 346 (357)
+++++|++.+|.++..+|++++.....+++++++.|...+...+. ++|++|
T Consensus 197 --------------------------~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e 247 (262)
T PRK07509 197 --------------------------ALAREIAQRSPDAIAAAKRLINRSWTASVRALLARESVEQIRLLL---GKNQKI 247 (262)
T ss_pred --------------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHH
Confidence 348899999999999999999998888999999999999888887 999999
Q ss_pred hhhheeccCC
Q 018384 347 VSNFQILNKH 356 (357)
Q Consensus 347 gi~afl~~r~ 356 (357)
|+++|+++|+
T Consensus 248 ~~~af~ekr~ 257 (262)
T PRK07509 248 AVKAQMKKRA 257 (262)
T ss_pred HHHHHhcCCC
Confidence 9999999985
No 48
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=100.00 E-value=2.1e-52 Score=385.45 Aligned_cols=248 Identities=17% Similarity=0.214 Sum_probs=213.8
Q ss_pred ceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCChHHH
Q 018384 35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC 112 (357)
Q Consensus 35 ~i~~~~-~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (357)
.+.+++ +++|++||||||++.|+||.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..... ......
T Consensus 3 ~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~-~~~~~~ 81 (259)
T TIGR01929 3 DIRYEKSTDGIAKITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYGY-IDDSGV 81 (259)
T ss_pred eEEEEEcCCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhccc-cchhhH
Confidence 477888 899999999999999999999999999999999999999999999999 79999999987642110 011111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HH
Q 018384 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (357)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (357)
.. .....++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 82 ~~--~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~~a~ 159 (259)
T TIGR01929 82 HR--LNVLDVQRQIRTCPKPVIAMVNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQKKAR 159 (259)
T ss_pred HH--HHHHHHHHHHHhCCCCEEEEEcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHHHHH
Confidence 11 1234567788999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCC
Q 018384 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (357)
Q Consensus 192 ~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
+|+++|++++|+||+++|||++|+|++++.+.+.
T Consensus 160 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 193 (259)
T TIGR01929 160 EIWFLCRQYDAEQALDMGLVNTVVPLADLEKETV---------------------------------------------- 193 (259)
T ss_pred HHHHhCCccCHHHHHHcCCcccccCHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999887765433
Q ss_pred HHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018384 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 351 (357)
Q Consensus 272 ~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~af 351 (357)
+++++|++.||.+++.+|++++..... ....+..|...+...+. ++|++||+++|
T Consensus 194 ---------------------~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~~~~---~~d~~egi~af 248 (259)
T TIGR01929 194 ---------------------RWCREILQKSPMAIRMLKAALNADCDG-QAGLQELAGNATMLFYM---TEEGQEGRNAF 248 (259)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHhc---CccHHHHHHHH
Confidence 348999999999999999999876443 45555567677777776 99999999999
Q ss_pred eccCC
Q 018384 352 ILNKH 356 (357)
Q Consensus 352 l~~r~ 356 (357)
+++|+
T Consensus 249 ~~kr~ 253 (259)
T TIGR01929 249 LEKRQ 253 (259)
T ss_pred hccCC
Confidence 99985
No 49
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.7e-52 Score=384.38 Aligned_cols=249 Identities=21% Similarity=0.316 Sum_probs=221.8
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHH
Q 018384 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 32 ~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
|++.+.++++++|++||||||+ .|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.... .....
T Consensus 2 ~~~~i~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~--~~~~~ 78 (257)
T PRK06495 2 MMSQLKLEVSDHVAVVTLDNPP-VNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVI--KGPGD 78 (257)
T ss_pred CcceEEEEeeCCEEEEEECCCc-cccCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcCHHhHhhcc--CCchh
Confidence 4567899999999999999998 59999999999999999999999999999999999999999999875421 11122
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-H
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (357)
...+......++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+. |+++++++++|.. +
T Consensus 79 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~~~a 155 (257)
T PRK06495 79 LRAHNRRTRECFHAIRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHSLT 155 (257)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCHHHH
Confidence 23334455677888999999999999999999999999999999999999999999999996 4567899999998 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 191 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
++|+++|++++|+||+++|||++++|++++.+.+.
T Consensus 156 ~~lll~g~~~~a~eA~~~GLv~~vv~~~~~~~~a~--------------------------------------------- 190 (257)
T PRK06495 156 RRMMLTGYRVPAAELYRRGVIEACLPPEELMPEAM--------------------------------------------- 190 (257)
T ss_pred HHHHHcCCeeCHHHHHHcCCcceecCHHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999888765433
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 350 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~a 350 (357)
+++++|++.||.+++.+|++++.....+++++++.|...+...+. ++|++||+++
T Consensus 191 ----------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~egi~a 245 (257)
T PRK06495 191 ----------------------EIAREIASKSPLATRLAKDALNTIENMSLRDGYRYEQDITAKLAK---TEDAKEAQRA 245 (257)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChHHHHHHHH
Confidence 348999999999999999999988888999999999999988887 9999999999
Q ss_pred eeccCC
Q 018384 351 QILNKH 356 (357)
Q Consensus 351 fl~~r~ 356 (357)
|+++|+
T Consensus 246 f~~kr~ 251 (257)
T PRK06495 246 FLEKRP 251 (257)
T ss_pred HhccCC
Confidence 999985
No 50
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.8e-52 Score=388.02 Aligned_cols=255 Identities=20% Similarity=0.265 Sum_probs=218.2
Q ss_pred CCCceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccC---
Q 018384 32 LCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG--- 107 (357)
Q Consensus 32 ~~~~i~~~~-~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~--- 107 (357)
.++.+.++. +++|++|+||||++.|++|.+|+.+|.+++++++.|+++++|||+|.|++||+|+|++++.......
T Consensus 7 ~~~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~~~~ 86 (276)
T PRK05864 7 TMSLVLVDHPRPEIALITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHVEGLT 86 (276)
T ss_pred CCCceEEeeecCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcchhhhhccccccccc
Confidence 455678887 7899999999999999999999999999999999999999999999999999999999864211000
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccC-CCcHHHHHhhcC
Q 018384 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP-DAGASFYLSHLP 186 (357)
Q Consensus 108 ~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p-~~g~~~~l~r~~ 186 (357)
...........+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++| ++|++++|++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~v 166 (276)
T PRK05864 87 RPTYALRSMELLDDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAI 166 (276)
T ss_pred chhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhhh
Confidence 1111122334456677889999999999999999999999999999999999999999999999997 788999999999
Q ss_pred hHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHH
Q 018384 187 GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDK 265 (357)
Q Consensus 187 g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (357)
|.. +++|+++|++++|+||+++|||++++|++++.+.+.
T Consensus 167 G~~~A~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------- 206 (276)
T PRK05864 167 GSSRAFEIMLTGRDVDAEEAERIGLVSRQVPDEQLLDTCY---------------------------------------- 206 (276)
T ss_pred CHHHHHHHHHcCCccCHHHHHHcCCcceeeCHHHHHHHHH----------------------------------------
Confidence 999 999999999999999999999999999888765433
Q ss_pred HcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcC-CHHHHHHHHHHHHH-HhhhcCCCCC
Q 018384 266 CFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQ-TFDECLVREYRMSL-QGVSRLISGD 343 (357)
Q Consensus 266 ~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~-~l~~~l~~e~~~~~-~~~~~~~s~d 343 (357)
+++++|+..||.+++.+|++++..... +++++++.|..... ..+. ++|
T Consensus 207 ---------------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~---~~d 256 (276)
T PRK05864 207 ---------------------------AIAARMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFVRLL---TAN 256 (276)
T ss_pred ---------------------------HHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhcc---Chh
Confidence 348999999999999999999887665 78888888765322 2344 999
Q ss_pred hhhhhhheeccCC
Q 018384 344 FYEVSNFQILNKH 356 (357)
Q Consensus 344 ~~egi~afl~~r~ 356 (357)
++||+++|+++|+
T Consensus 257 ~~e~~~af~~kr~ 269 (276)
T PRK05864 257 FEEAVAARAEKRP 269 (276)
T ss_pred HHHHHHHHhccCC
Confidence 9999999999985
No 51
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.6e-52 Score=385.75 Aligned_cols=249 Identities=21% Similarity=0.287 Sum_probs=215.5
Q ss_pred CCCceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChH
Q 018384 32 LCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE 110 (357)
Q Consensus 32 ~~~~i~~~~-~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~ 110 (357)
.++.+.+++ +++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|.|++++.... ....
T Consensus 9 ~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~--~~~~ 86 (268)
T PRK07327 9 DYPALRFDRPPPGVLEIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEMA--DDFE 86 (268)
T ss_pred CCCeEEEEecCCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhhhCCCceEEEEECCCCCcccccCHHHHhhcc--CcHH
Confidence 456788888 5789999999999999999999999999999999999999999999999999999999875421 1222
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-
Q 018384 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (357)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~- 189 (357)
....++.....++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 166 (268)
T PRK07327 87 VRARVWREARDLVYNVINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMAK 166 (268)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCEEEEEcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHHH
Confidence 2333445556788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCC
Q 018384 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (357)
Q Consensus 190 a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (357)
+++|++||++++|+||+++|||++++|++++.+.+.
T Consensus 167 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------------- 202 (268)
T PRK07327 167 AKYYLLLCEPVSGEEAERIGLVSLAVDDDELLPKAL-------------------------------------------- 202 (268)
T ss_pred HHHHHHcCCccCHHHHHHcCCcceecCHHHHHHHHH--------------------------------------------
Confidence 999999999999999999999999999888765433
Q ss_pred CCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHhhhcCCCCChhh
Q 018384 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF---QTFDECLVREYRMSLQGVSRLISGDFYE 346 (357)
Q Consensus 270 ~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~---~~l~~~l~~e~~~~~~~~~~~~s~d~~e 346 (357)
+++++|++.||.+++.+|++++.... ..+++.+..|. ..+. ++|++|
T Consensus 203 -----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~----~~~~---~~d~~e 252 (268)
T PRK07327 203 -----------------------EVAERLAAGSQTAIRWTKYALNNWLRMAGPTFDTSLALEF----MGFS---GPDVRE 252 (268)
T ss_pred -----------------------HHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH----HHcc---ChhHHH
Confidence 34899999999999999999986522 24555555443 3444 999999
Q ss_pred hhhheeccCC
Q 018384 347 VSNFQILNKH 356 (357)
Q Consensus 347 gi~afl~~r~ 356 (357)
|+++|+++|+
T Consensus 253 g~~af~ekr~ 262 (268)
T PRK07327 253 GLASLREKRA 262 (268)
T ss_pred HHHHHHhcCC
Confidence 9999999985
No 52
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.8e-52 Score=384.34 Aligned_cols=249 Identities=24% Similarity=0.319 Sum_probs=217.5
Q ss_pred cCCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCCh
Q 018384 31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKL 109 (357)
Q Consensus 31 ~~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~ 109 (357)
.+.+.+.++++++|++|+||||++.|++|.+|+.+|.+++++++.|+++++|||||.| ++||+|+|++++.... ..
T Consensus 5 ~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~~---~~ 81 (262)
T PRK06144 5 TSTDELLLEVRGGIARITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAFS---TA 81 (262)
T ss_pred cCCCceEEEeeCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhcc---ch
Confidence 4456789999999999999999999999999999999999999999999999999998 7999999999875421 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEeccccc-ccccCCCcHHHHHhhcChH
Q 018384 110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL-IGFHPDAGASFYLSHLPGH 188 (357)
Q Consensus 110 ~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~-~Gl~p~~g~~~~l~r~~g~ 188 (357)
.....+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||++ +|++|++|++++|++++|.
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~vG~ 161 (262)
T PRK06144 82 EDAVAYERRIDRVLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALLGA 161 (262)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHhCH
Confidence 222234445667888899999999999999999999999999999999999999999997 9999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHc
Q 018384 189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF 267 (357)
Q Consensus 189 ~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (357)
. +++++++|++++|+||+++|||++|+|++++.+.+.
T Consensus 162 ~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------ 199 (262)
T PRK06144 162 ARVKDMLFTARLLEAEEALAAGLVNEVVEDAALDARAD------------------------------------------ 199 (262)
T ss_pred HHHHHHHHcCCCcCHHHHHHcCCcCeecCHHHHHHHHH------------------------------------------
Confidence 9 999999999999999999999999999887765433
Q ss_pred CCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhh
Q 018384 268 GLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEV 347 (357)
Q Consensus 268 ~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~eg 347 (357)
+++++|++.||.++..+|+.++......++ .+...+...+. ++|++||
T Consensus 200 -------------------------~~a~~i~~~~~~a~~~~K~~l~~~~~~~l~----~~~~~~~~~~~---~~~~~e~ 247 (262)
T PRK06144 200 -------------------------ALAELLAAHAPLTLRATKEALRRLRREGLP----DGDDLIRMCYM---SEDFREG 247 (262)
T ss_pred -------------------------HHHHHHHhCCHHHHHHHHHHHHHhhhcCHH----HHHHHHHHHhc---ChHHHHH
Confidence 348999999999999999999976555443 34456666666 9999999
Q ss_pred hhheeccCC
Q 018384 348 SNFQILNKH 356 (357)
Q Consensus 348 i~afl~~r~ 356 (357)
+++|+++|+
T Consensus 248 ~~af~~kr~ 256 (262)
T PRK06144 248 VEAFLEKRP 256 (262)
T ss_pred HHHHhcCCC
Confidence 999999985
No 53
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8e-52 Score=379.29 Aligned_cols=241 Identities=20% Similarity=0.202 Sum_probs=213.5
Q ss_pred EEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHH
Q 018384 39 EGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRT 118 (357)
Q Consensus 39 ~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~ 118 (357)
+++++|++||||||+ .|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++... ........+...
T Consensus 7 ~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~---~~~~~~~~~~~~ 82 (249)
T PRK07938 7 TPEPGIAEVTVDYPP-VNALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQAT---PGFTALIDANRG 82 (249)
T ss_pred ccCCCEEEEEECCCC-cccCCHHHHHHHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHHhhc---cchhHHHHHHHH
Confidence 457899999999998 5999999999999999999999999999999999999999999986431 111222223344
Q ss_pred HHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHHHHhcC
Q 018384 119 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTG 197 (357)
Q Consensus 119 ~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG 197 (357)
...++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++ |++++|++++|.. +++|+++|
T Consensus 83 ~~~~~~~i~~~~kPvIAav~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~~a~~l~ltg 159 (249)
T PRK07938 83 CFAAFRAVYECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQHLMRALFFTA 159 (249)
T ss_pred HHHHHHHHHhCCCCEEEEEcCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHHHHHHHHHhC
Confidence 4567888999999999999999999999999999999999999999999999985 5667899999999 99999999
Q ss_pred CCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCHHHHHH
Q 018384 198 AKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIID 277 (357)
Q Consensus 198 ~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~i~~ 277 (357)
++++|+||+++|||+++||++++.+.+.
T Consensus 160 ~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------------- 187 (249)
T PRK07938 160 ATITAAELHHFGSVEEVVPRDQLDEAAL---------------------------------------------------- 187 (249)
T ss_pred CcCCHHHHHHCCCccEEeCHHHHHHHHH----------------------------------------------------
Confidence 9999999999999999999888765443
Q ss_pred HHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheeccCC
Q 018384 278 SLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 356 (357)
Q Consensus 278 ~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl~~r~ 356 (357)
+++++|+.+||.+++.+|++++.....++++.++.|...+...+. ++|++||+++|++||+
T Consensus 188 ---------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~ekr~ 248 (249)
T PRK07938 188 ---------------EVARKIAAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELNL---AGVSDEHRDAFVEKRK 248 (249)
T ss_pred ---------------HHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHHhcCC
Confidence 348999999999999999999988888899999999988888887 9999999999999986
No 54
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=100.00 E-value=2.3e-52 Score=382.71 Aligned_cols=244 Identities=30% Similarity=0.452 Sum_probs=228.5
Q ss_pred EEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHH
Q 018384 37 LVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFF 116 (357)
Q Consensus 37 ~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~ 116 (357)
.++.+|+|++|+||+|++.|++|.+++.+|.++|+.++.|+++++||++|.|++||+|.|++++... ..+....+.
T Consensus 1 ~~~~~~~v~~i~ln~p~~~N~l~~~~~~~l~~~l~~~~~d~~v~vvv~~~~~~~F~~G~Dl~~~~~~----~~~~~~~~~ 76 (245)
T PF00378_consen 1 KYEIEDGVATITLNRPEKRNALNPEMLDELEEALDEAEADPDVKVVVISGGGKAFCAGADLKEFLNS----DEEEAREFF 76 (245)
T ss_dssp EEEEETTEEEEEEECGGGTTEBSHHHHHHHHHHHHHHHHSTTESEEEEEESTSESBESB-HHHHHHH----HHHHHHHHH
T ss_pred CEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhcCCccEEEEeecccccccccchhhhhcc----ccccccccc
Confidence 4789999999999999889999999999999999999999999999999999999999999998764 345566777
Q ss_pred HHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHHHHh
Q 018384 117 RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLAL 195 (357)
Q Consensus 117 ~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~l 195 (357)
..++.++.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +.++++
T Consensus 77 ~~~~~l~~~l~~~~kp~Iaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~~a~~l~l 156 (245)
T PF00378_consen 77 RRFQELLSRLANFPKPTIAAVNGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGPSRARELLL 156 (245)
T ss_dssp HHHHHHHHHHHHSSSEEEEEESSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccccchhhhhheeecccccccccccccccccceEEeecccceeeeecccCcccccccccccceeeeccccccccc
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred cCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCHHHH
Q 018384 196 TGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEI 275 (357)
Q Consensus 196 tG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~i 275 (357)
+|++++|+||+++|||++++|++++.+.+..
T Consensus 157 ~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~------------------------------------------------- 187 (245)
T PF00378_consen 157 TGEPISAEEALELGLVDEVVPDEELDEEALE------------------------------------------------- 187 (245)
T ss_dssp HTCEEEHHHHHHTTSSSEEESGGGHHHHHHH-------------------------------------------------
T ss_pred ccccchhHHHHhhcceeEEcCchhhhHHHHH-------------------------------------------------
Confidence 9999999999999999999999887654443
Q ss_pred HHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheecc
Q 018384 276 IDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN 354 (357)
Q Consensus 276 ~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl~~ 354 (357)
++++++..+|.+++.+|+.+++.....+++.++.|...+...+. ++|++||+++|+||
T Consensus 188 ------------------~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~e~~~~f~eK 245 (245)
T PF00378_consen 188 ------------------LAKRLAAKPPSALRATKKALNRALEQSLEEALEFEQDLFAECFK---SEDFQEGIAAFLEK 245 (245)
T ss_dssp ------------------HHHHHHTSCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTT
T ss_pred ------------------HHHHHhcCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC---CHHHHHHHHHHhCc
Confidence 38999999999999999999999888999999999999999998 99999999999986
No 55
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=100.00 E-value=6.4e-52 Score=385.30 Aligned_cols=254 Identities=19% Similarity=0.211 Sum_probs=222.6
Q ss_pred cccCCCceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC--CccccccChHHHHHhhc
Q 018384 29 TDDLCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG--RAFCAGGDIVSLYHFMN 105 (357)
Q Consensus 29 ~~~~~~~i~~~~-~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g--~~F~~G~Dl~~~~~~~~ 105 (357)
.|.....+.+++ +++|++||||||+ .|+||.+|+.+|.+++++++.|+++++|||||.| ++||+|.|++++....
T Consensus 6 ~~~~~~~i~~~~~~~~Va~itlnr~~-~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~~- 83 (278)
T PLN03214 6 PPGATPGVRVDRRPGGIAVVWLAKEP-VNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAPK- 83 (278)
T ss_pred CCCCCCceEEEEcCCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhccc-
Confidence 344556889998 6899999999986 6999999999999999999999999999999998 6999999999875311
Q ss_pred cCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccc-cCCCcHHHHHhh
Q 018384 106 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF-HPDAGASFYLSH 184 (357)
Q Consensus 106 ~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl-~p~~g~~~~l~r 184 (357)
........+......++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+ +|++|++++|++
T Consensus 84 -~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l~~ 162 (278)
T PLN03214 84 -TSAARYAEFWLTQTTFLVRLLRSRLATVCAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGR 162 (278)
T ss_pred -cchHHHHHHHHHHHHHHHHHHcCCCCEEEEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHHHH
Confidence 111222233333455778899999999999999999999999999999999999999999999999 599999999999
Q ss_pred cChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHH
Q 018384 185 LPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIV 263 (357)
Q Consensus 185 ~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (357)
++|.. +++|+++|+.++++||+++|||++++|++++.+.+.
T Consensus 163 ~~G~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------- 204 (278)
T PLN03214 163 VIDRKVAESLLLRGRLVRPAEAKQLGLIDEVVPAAALMEAAA-------------------------------------- 204 (278)
T ss_pred hcCHHHHHHHHHcCCccCHHHHHHcCCCcEecChHHHHHHHH--------------------------------------
Confidence 99999 999999999999999999999999999877764333
Q ss_pred HHHcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCC
Q 018384 264 DKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGD 343 (357)
Q Consensus 264 ~~~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d 343 (357)
+++++|+..+|.+++.+|+++++....+++++++.|...+...+. ++|
T Consensus 205 -----------------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d 252 (278)
T PLN03214 205 -----------------------------SAMERALKLPSAARAATKALLREEFSAAWEAYYEEEAKGGWKMLS---EPS 252 (278)
T ss_pred -----------------------------HHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC---CHH
Confidence 348899999999999999999988888899999999998888887 999
Q ss_pred hhhhhhheeccC
Q 018384 344 FYEVSNFQILNK 355 (357)
Q Consensus 344 ~~egi~afl~~r 355 (357)
++||+++|+++.
T Consensus 253 ~~egi~aflek~ 264 (278)
T PLN03214 253 IIKALGGVMERL 264 (278)
T ss_pred HHHHHHHHHHHH
Confidence 999999999874
No 56
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=100.00 E-value=1.3e-51 Score=380.15 Aligned_cols=249 Identities=29% Similarity=0.403 Sum_probs=222.2
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHH
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (357)
+..+.++..++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++.+.. .......
T Consensus 4 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g~~FsaG~Dl~~~~~---~~~~~~~ 80 (257)
T COG1024 4 YETILVEREDGIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLS---PEDGNAA 80 (257)
T ss_pred CCeeEEEeeCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhc---ccchhHH
Confidence 4568888999999999999999999999999999999999999999999999999999999999999864 1112222
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HH
Q 018384 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (357)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (357)
..+....+.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +.
T Consensus 81 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~~~a~ 160 (257)
T COG1024 81 ENLMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRGRAK 160 (257)
T ss_pred HHHHhHHHHHHHHHHhCCCCEEEEEcceEeechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCHHHHH
Confidence 25666677899999999999999999999999999999999999999999999999999999889999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCC-CChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 192 FLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 192 ~l~ltG~~i~a~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
+|++||+.++++||+++|||++++++ +++.+.+..
T Consensus 161 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~~l~~~a~~-------------------------------------------- 196 (257)
T COG1024 161 ELLLTGEPISAAEALELGLVDEVVPDAEELLERALE-------------------------------------------- 196 (257)
T ss_pred HHHHcCCcCCHHHHHHcCCcCeeeCCHHHHHHHHHH--------------------------------------------
Confidence 99999999999999999999999985 466544433
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 350 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~a 350 (357)
++++++. +|.++..+|+.++.....++++.+..|...+...+. ++|++||+++
T Consensus 197 -----------------------~a~~~a~-~~~a~~~~k~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~d~~eg~~a 249 (257)
T COG1024 197 -----------------------LARRLAA-PPLALAATKRLVRAALEADLAEALEAEALAFARLFS---SEDFREGVRA 249 (257)
T ss_pred -----------------------HHHHHcc-CHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhc---ChhHHHHHHH
Confidence 3666666 999999999999998777799999999999888666 9999999999
Q ss_pred eeccCC
Q 018384 351 QILNKH 356 (357)
Q Consensus 351 fl~~r~ 356 (357)
|++ |+
T Consensus 250 ~~~-r~ 254 (257)
T COG1024 250 FLE-RK 254 (257)
T ss_pred HHc-cC
Confidence 998 54
No 57
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.2e-51 Score=387.31 Aligned_cols=253 Identities=22% Similarity=0.261 Sum_probs=215.7
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccC-----
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG----- 107 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~----- 107 (357)
++.+.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++.......
T Consensus 3 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (296)
T PRK08260 3 YETIRYDVADGIATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTP 82 (296)
T ss_pred cceEEEeeeCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCCeecCcChHHhhhcccccccccc
Confidence 356889999999999999999999999999999999999999999999999999999999999999864211000
Q ss_pred -------C-hHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHH
Q 018384 108 -------K-LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGAS 179 (357)
Q Consensus 108 -------~-~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~ 179 (357)
. ......+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~ 162 (296)
T PRK08260 83 VEADEEDRADPSDDGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASS 162 (296)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcchh
Confidence 0 11112233334567788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHH
Q 018384 180 FYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIH 258 (357)
Q Consensus 180 ~~l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (357)
++|++++|.. +++|+++|++++|+||+++|||++|+|++++.+.+.
T Consensus 163 ~~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~--------------------------------- 209 (296)
T PRK08260 163 WFLPRLVGLQTALEWVYSGRVFDAQEALDGGLVRSVHPPDELLPAAR--------------------------------- 209 (296)
T ss_pred hhHHHhhCHHHHHHHHHcCCccCHHHHHHCCCceeecCHHHHHHHHH---------------------------------
Confidence 9999999999 999999999999999999999999999877754333
Q ss_pred HHHHHHHHcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhc-CchHHHHHHHHHHhhhc--CCHHHHHHHHHHHHHHh
Q 018384 259 RIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEA-SPLSLKVSLRSIREGRF--QTFDECLVREYRMSLQG 335 (357)
Q Consensus 259 ~~~~~~~~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~-~p~a~~~~k~~l~~~~~--~~l~~~l~~e~~~~~~~ 335 (357)
+++++|+.+ +|.+++.+|++++.... ..++. ...|...+...
T Consensus 210 ----------------------------------~~a~~i~~~~~~~a~~~~K~~l~~~~~~~~~~~~-~~~e~~~~~~~ 254 (296)
T PRK08260 210 ----------------------------------ALAREIADNTSPVSVALTRQMMWRMAGADHPMEA-HRVDSRAIYSR 254 (296)
T ss_pred ----------------------------------HHHHHHHhcCChHHHHHHHHHHHhcccCCCcHHH-HHHHHHHHHHH
Confidence 348889885 99999999999997643 23443 35577777777
Q ss_pred hhcCCCCChhhhhhheeccCC
Q 018384 336 VSRLISGDFYEVSNFQILNKH 356 (357)
Q Consensus 336 ~~~~~s~d~~egi~afl~~r~ 356 (357)
+. ++|++||+++|+++|+
T Consensus 255 ~~---~~d~~egi~af~~kr~ 272 (296)
T PRK08260 255 GR---SGDGKEGVSSFLEKRP 272 (296)
T ss_pred cc---ChhHHHHHHHHhcCCC
Confidence 76 9999999999999985
No 58
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=100.00 E-value=1.4e-51 Score=382.71 Aligned_cols=251 Identities=18% Similarity=0.217 Sum_probs=216.3
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCChH
Q 018384 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLE 110 (357)
Q Consensus 32 ~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~ 110 (357)
.++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..... ....
T Consensus 11 ~~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~-~~~~ 89 (273)
T PRK07396 11 EYEDILYKSADGIAKITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGGY-VDDD 89 (273)
T ss_pred CCcceEEEecCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhcccc-cchh
Confidence 356788999999999999999999999999999999999999999999999999999 69999999998642110 0111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-
Q 018384 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (357)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~- 189 (357)
....+ ....++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 90 ~~~~~--~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~~ 167 (273)
T PRK07396 90 GVPRL--NVLDLQRLIRTCPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQKK 167 (273)
T ss_pred hhhhh--HHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHHH
Confidence 11111 123466788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCC
Q 018384 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (357)
Q Consensus 190 a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (357)
+++|+++|++++|+||+++||||+|+|++++.+.+.
T Consensus 168 a~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~-------------------------------------------- 203 (273)
T PRK07396 168 AREIWFLCRQYDAQEALDMGLVNTVVPLADLEKETV-------------------------------------------- 203 (273)
T ss_pred HHHHHHhCCCcCHHHHHHcCCcCeecCHHHHHHHHH--------------------------------------------
Confidence 999999999999999999999999999887765443
Q ss_pred CCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 018384 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN 349 (357)
Q Consensus 270 ~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~ 349 (357)
+++++|++.+|.+++.+|++++.... .++...+.|...+...+. ++|++||+.
T Consensus 204 -----------------------~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~---~~d~~egi~ 256 (273)
T PRK07396 204 -----------------------RWCREMLQNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFYM---TEEAQEGRN 256 (273)
T ss_pred -----------------------HHHHHHHhCCHHHHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHhc---ChhHHHHHH
Confidence 34899999999999999999987644 455555567777777776 999999999
Q ss_pred heeccCC
Q 018384 350 FQILNKH 356 (357)
Q Consensus 350 afl~~r~ 356 (357)
+|+++|+
T Consensus 257 af~~kr~ 263 (273)
T PRK07396 257 AFNEKRQ 263 (273)
T ss_pred HHhCCCC
Confidence 9999985
No 59
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=100.00 E-value=2e-51 Score=379.21 Aligned_cols=248 Identities=18% Similarity=0.210 Sum_probs=218.7
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecC-C-CccccccChHHHHHhhccCChH
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-G-RAFCAGGDIVSLYHFMNQGKLE 110 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~-g-~~F~~G~Dl~~~~~~~~~~~~~ 110 (357)
++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+ +++|||||. | ++||+|+|++++.... .+
T Consensus 3 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~~--~~-- 77 (261)
T PRK11423 3 MQYVNVVTINKIATITFNNPAKRNALSKVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGG--RD-- 77 (261)
T ss_pred ccceEEEeECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhcc--cc--
Confidence 457889999999999999999999999999999999999999888 999999996 3 8999999999874321 11
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-
Q 018384 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (357)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~- 189 (357)
...+...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|..
T Consensus 78 -~~~~~~~~~~l~~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~~~ 156 (261)
T PRK11423 78 -PLSYDDPLRQILRMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFHI 156 (261)
T ss_pred -HHHHHHHHHHHHHHHHhCCCCEEEEEecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHhHHHH
Confidence 122334456788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCC
Q 018384 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (357)
Q Consensus 190 a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (357)
+++|+++|++++|+||+++||||+|+|++++++.+.
T Consensus 157 a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~l~~~a~-------------------------------------------- 192 (261)
T PRK11423 157 VKEMFFTASPITAQRALAVGILNHVVEVEELEDFTL-------------------------------------------- 192 (261)
T ss_pred HHHHHHcCCCcCHHHHHHcCCcCcccCHHHHHHHHH--------------------------------------------
Confidence 999999999999999999999999999887765433
Q ss_pred CCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhc-CCH-HHHHHHHHHHHHHhhhcCCCCChhhh
Q 018384 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTF-DECLVREYRMSLQGVSRLISGDFYEV 347 (357)
Q Consensus 270 ~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~-~~l-~~~l~~e~~~~~~~~~~~~s~d~~eg 347 (357)
+++++|++.+|.+++.+|++++.... ..+ +.+++.|...+...+. ++|++||
T Consensus 193 -----------------------~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~d~~eg 246 (261)
T PRK11423 193 -----------------------QMAHHISEKAPLAIAVIKEQLRVLGEAHPMNPDEFERIQGLRRAVYD---SEDYQEG 246 (261)
T ss_pred -----------------------HHHHHHHhcCHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHhC---ChhHHHH
Confidence 34899999999999999999986543 344 6888888888888887 9999999
Q ss_pred hhheeccCC
Q 018384 348 SNFQILNKH 356 (357)
Q Consensus 348 i~afl~~r~ 356 (357)
+.+|+++|+
T Consensus 247 ~~af~~kr~ 255 (261)
T PRK11423 247 MNAFLEKRK 255 (261)
T ss_pred HHHHhccCC
Confidence 999999985
No 60
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.6e-51 Score=374.93 Aligned_cols=241 Identities=24% Similarity=0.315 Sum_probs=215.5
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHH
Q 018384 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (357)
Q Consensus 36 i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (357)
+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|.|++++... . ...+
T Consensus 2 i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~a~~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~----~---~~~~ 74 (248)
T PRK06072 2 IKVESREGYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPD----F---AIDL 74 (248)
T ss_pred eEEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhh----h---HHHH
Confidence 57788999999999999999999999999999999999999999999999999999999999987431 1 1223
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHHHHh
Q 018384 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLAL 195 (357)
Q Consensus 116 ~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~l 195 (357)
...++.++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|..++++++
T Consensus 75 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g~~a~~lll 154 (248)
T PRK06072 75 RETFYPIIREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTGQRFYEILV 154 (248)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhhHHHHHHHH
Confidence 34456678889999999999999999999999999999999999999999999999999999999999999966999999
Q ss_pred cCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCHHHH
Q 018384 196 TGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEI 275 (357)
Q Consensus 196 tG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~i 275 (357)
+|++++|+||+++|||+++ +++.+.+.
T Consensus 155 ~g~~~~a~eA~~~Glv~~~---~~~~~~a~-------------------------------------------------- 181 (248)
T PRK06072 155 LGGEFTAEEAERWGLLKIS---EDPLSDAE-------------------------------------------------- 181 (248)
T ss_pred hCCccCHHHHHHCCCcccc---chHHHHHH--------------------------------------------------
Confidence 9999999999999999963 23332222
Q ss_pred HHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheeccC
Q 018384 276 IDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK 355 (357)
Q Consensus 276 ~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl~~r 355 (357)
+++++|++.||.+++.+|++++.....++++.++.|...+...+. ++|++||+++|+++|
T Consensus 182 -----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~~kr 241 (248)
T PRK06072 182 -----------------EMANRISNGPFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLGK---TEDFKEGISSFKEKR 241 (248)
T ss_pred -----------------HHHHHHHhCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhC---ChhHHHHHHHHhcCC
Confidence 348999999999999999999988888999999999999888887 999999999999998
Q ss_pred C
Q 018384 356 H 356 (357)
Q Consensus 356 ~ 356 (357)
+
T Consensus 242 ~ 242 (248)
T PRK06072 242 E 242 (248)
T ss_pred C
Confidence 6
No 61
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=100.00 E-value=3.3e-51 Score=375.50 Aligned_cols=241 Identities=21% Similarity=0.263 Sum_probs=210.1
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHH
Q 018384 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (357)
Q Consensus 36 i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (357)
|.++++++|++||||||+ .|+||.+|+.+|.+++++++.|+++++|||||.|++||+|.|+.++.. .....+
T Consensus 3 v~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~~~~vr~vVl~g~g~~FcaG~Dl~~~~~-------~~~~~~ 74 (251)
T TIGR03189 3 VWLERDGKLLRLRLARPK-ANIVDAAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASVAEHMP-------DQCAAM 74 (251)
T ss_pred EEEEeeCCEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHHcCCCceEEEEECCCCceecCcChhhhCc-------hhHHHH
Confidence 678889999999999997 599999999999999999999999999999999999999999987531 111223
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHHHH
Q 018384 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 194 (357)
Q Consensus 116 ~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ 194 (357)
......++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++++|++++|.. +++|+
T Consensus 75 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~-~~~~~l~~~vg~~~a~~l~ 153 (251)
T TIGR03189 75 LASLHKLVIAMLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAP-AASCLLPERMGRVAAEDLL 153 (251)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCeeeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCC-chHHHHHHHhCHHHHHHHH
Confidence 344566788899999999999999999999999999999999999999999999999987 4578999999999 99999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCHHH
Q 018384 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE 274 (357)
Q Consensus 195 ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 274 (357)
++|++++|+||+++|||++++|+.+ . .+..+
T Consensus 154 ltg~~~~a~eA~~~Glv~~v~~~~~-~-~a~~~----------------------------------------------- 184 (251)
T TIGR03189 154 YSGRSIDGAEGARIGLANAVAEDPE-N-AALAW----------------------------------------------- 184 (251)
T ss_pred HcCCCCCHHHHHHCCCcceecCcHH-H-HHHHH-----------------------------------------------
Confidence 9999999999999999999997533 1 11111
Q ss_pred HHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHH-HHHHHHHHhhhcCCCCChhhhhhheec
Q 018384 275 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLV-REYRMSLQGVSRLISGDFYEVSNFQIL 353 (357)
Q Consensus 275 i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~-~e~~~~~~~~~~~~s~d~~egi~afl~ 353 (357)
++++|+++||.+++.+|++++.....++++++. .|...+...+. ++|++||+++|++
T Consensus 185 -------------------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~e 242 (251)
T TIGR03189 185 -------------------FDEHPAKLSASSLRFAVRAARLGMNERVKAKIAEVEALYLEELMA---THDAVEGLNAFLE 242 (251)
T ss_pred -------------------HHHHHHhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHhC---CHhHHHHHHHHHh
Confidence 257899999999999999999888888888764 67777777776 9999999999999
Q ss_pred cCC
Q 018384 354 NKH 356 (357)
Q Consensus 354 ~r~ 356 (357)
+|+
T Consensus 243 kr~ 245 (251)
T TIGR03189 243 KRP 245 (251)
T ss_pred cCC
Confidence 986
No 62
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.5e-51 Score=376.47 Aligned_cols=251 Identities=22% Similarity=0.213 Sum_probs=221.4
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHH
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (357)
...+.++++++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++..... ......
T Consensus 5 ~~~i~~~~~~~v~~i~lnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~~~~ 83 (260)
T PRK07827 5 DTLVRYAVDGGVATLTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGGG-DPYDAA 83 (260)
T ss_pred CcceEEEeeCCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCcChHHHhhccc-CchhHH
Confidence 3468889999999999999999999999999999999999999999999999999999999999998754210 111112
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHH
Q 018384 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF 192 (357)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~ 192 (357)
..+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++++++++..+++
T Consensus 84 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~~~~a~~ 163 (260)
T PRK07827 84 VARAREMTALLRAIVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSPRAAAR 163 (260)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhhHHHHHH
Confidence 23445567788899999999999999999999999999999999999999999999999999999999999987655999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCH
Q 018384 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (357)
Q Consensus 193 l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (357)
|+++|++++|+||+++|||+++++ ++.+.+.
T Consensus 164 l~l~g~~~~a~eA~~~Glv~~v~~--~l~~~a~----------------------------------------------- 194 (260)
T PRK07827 164 YYLTGEKFGAAEAARIGLVTAAAD--DVDAAVA----------------------------------------------- 194 (260)
T ss_pred HHHhCCccCHHHHHHcCCcccchH--HHHHHHH-----------------------------------------------
Confidence 999999999999999999999974 3543332
Q ss_pred HHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018384 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 352 (357)
Q Consensus 273 e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl 352 (357)
+++++|++.||.++..+|+++++.....+++.++.|...+...+. ++|++||+++|+
T Consensus 195 --------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~af~ 251 (260)
T PRK07827 195 --------------------ALLADLRRGSPQGLAESKALTTAAVLAGFDRDAEELTEESARLFV---SDEAREGMTAFL 251 (260)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHh
Confidence 348899999999999999999998888999999999999888887 999999999999
Q ss_pred ccCC
Q 018384 353 LNKH 356 (357)
Q Consensus 353 ~~r~ 356 (357)
++|+
T Consensus 252 ~kr~ 255 (260)
T PRK07827 252 QKRP 255 (260)
T ss_pred cCCC
Confidence 9885
No 63
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.3e-50 Score=371.34 Aligned_cols=243 Identities=19% Similarity=0.210 Sum_probs=219.9
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHH
Q 018384 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 32 ~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
|+..+.++++++|++|+||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|+|+.++.... ...
T Consensus 3 ~~~~~~~~~~~~v~~i~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~--~~~-- 78 (249)
T PRK07110 3 MKVVELREVEEGIAQVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQ--TGK-- 78 (249)
T ss_pred CCceEEEEeeCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCcChHHHhhcc--chh--
Confidence 5667889999999999999999999999999999999999999999999999999999999999999875421 111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-H
Q 018384 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (357)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (357)
..+.. ..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 79 -~~~~~--~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a 155 (249)
T PRK07110 79 -GTFTE--ANLYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGLALG 155 (249)
T ss_pred -hhHhh--HHHHHHHHcCCCCEEEEecCceechHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCHHHH
Confidence 11221 4678889999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 191 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
++++++|++++++||+++|||++|+|++++.+.+.
T Consensus 156 ~~llltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 190 (249)
T PRK07110 156 QEMLLTARYYRGAELKKRGVPFPVLPRAEVLEKAL--------------------------------------------- 190 (249)
T ss_pred HHHHHcCCccCHHHHHHcCCCeEEeChHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999887764333
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 350 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~a 350 (357)
+.+++|++.||.+++.+|+.++.....++++.++.|...+...+. ++|++||+++
T Consensus 191 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~~ 245 (249)
T PRK07110 191 ----------------------ELARSLAEKPRHSLVLLKDHLVADRRRRLPEVIEQEVAMHEKTFH---QPEVKRRIES 245 (249)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhC---CHhHHHHHHH
Confidence 238899999999999999999999889999999999999999987 9999999987
Q ss_pred e
Q 018384 351 Q 351 (357)
Q Consensus 351 f 351 (357)
.
T Consensus 246 ~ 246 (249)
T PRK07110 246 L 246 (249)
T ss_pred h
Confidence 4
No 64
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-50 Score=369.81 Aligned_cols=235 Identities=22% Similarity=0.303 Sum_probs=210.5
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHH
Q 018384 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (357)
Q Consensus 36 i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (357)
+.++++++|++||||||++.|++|.+|+.+|.+++++++.| ++++|||||.|++||+|+|+++... ...+
T Consensus 2 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~~-~vr~vvl~g~g~~F~aG~Dl~~~~~---------~~~~ 71 (243)
T PRK07854 2 IGVTRDGQVLTIELQRPERRNALNAELCEELREAVRKAVDE-SARAIVLTGQGTVFCAGADLSGDVY---------ADDF 71 (243)
T ss_pred ceEEEeCCEEEEEeCCCccccCCCHHHHHHHHHHHHHHhcC-CceEEEEECCCCceecccCCccchh---------HHHH
Confidence 56888999999999999999999999999999999999865 8999999999999999999984211 1223
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHHHH
Q 018384 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 194 (357)
Q Consensus 116 ~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ 194 (357)
...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|+
T Consensus 72 ~~~~~~~~~~l~~~~kP~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ 151 (243)
T PRK07854 72 PDALIEMLHAIDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGGRARAML 151 (243)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCcccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHHHHHHHH
Confidence 34456678889999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCHHH
Q 018384 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE 274 (357)
Q Consensus 195 ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 274 (357)
++|++++|+||+++|||++|++ ++ .+.
T Consensus 152 ltg~~~~a~eA~~~Glv~~v~~---~~-~a~------------------------------------------------- 178 (243)
T PRK07854 152 LGAEKLTAEQALATGMANRIGT---LA-DAQ------------------------------------------------- 178 (243)
T ss_pred HcCCCcCHHHHHHCCCcccccC---HH-HHH-------------------------------------------------
Confidence 9999999999999999999965 22 122
Q ss_pred HHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheecc
Q 018384 275 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN 354 (357)
Q Consensus 275 i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl~~ 354 (357)
+++++|++.||.++..+|++++.. .+++++++.|...+...+. ++|++||+++|+++
T Consensus 179 ------------------~~a~~l~~~~~~a~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~k 235 (243)
T PRK07854 179 ------------------AWAAEIAGLAPLALQHAKRVLNDD--GAIEEAWPAHKELFDKAWA---SQDAIEAQVARIEK 235 (243)
T ss_pred ------------------HHHHHHHhCCHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhCC
Confidence 248899999999999999999875 6799999999998888887 99999999999999
Q ss_pred CC
Q 018384 355 KH 356 (357)
Q Consensus 355 r~ 356 (357)
|+
T Consensus 236 r~ 237 (243)
T PRK07854 236 RP 237 (243)
T ss_pred CC
Confidence 85
No 65
>PLN02921 naphthoate synthase
Probab=100.00 E-value=1.5e-50 Score=382.52 Aligned_cols=251 Identities=17% Similarity=0.211 Sum_probs=213.3
Q ss_pred CCCceEEEE--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCC
Q 018384 32 LCNQVLVEG--KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGK 108 (357)
Q Consensus 32 ~~~~i~~~~--~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~ 108 (357)
.++.|.+++ +++|++|+||||++.|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... ...
T Consensus 63 ~~~~i~~~~~~~~~Va~ItLnrP~~~Nal~~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~-~~~ 141 (327)
T PLN02921 63 EFTDIIYEKAVGEGIAKITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDG-YVG 141 (327)
T ss_pred CCceEEEEEecCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhccc-ccc
Confidence 466788887 589999999999999999999999999999999999999999999999 8999999999764210 011
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChH
Q 018384 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188 (357)
Q Consensus 109 ~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~ 188 (357)
......+ ....++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus 142 ~~~~~~~--~~~~l~~~l~~~~kPvIAaVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~ 219 (327)
T PLN02921 142 PDDAGRL--NVLDLQIQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQ 219 (327)
T ss_pred hhHHHHH--HHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCH
Confidence 1111111 12346778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHc
Q 018384 189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF 267 (357)
Q Consensus 189 ~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (357)
. +++|+++|+.++|+||+++|||++|+|++++.+.+.+
T Consensus 220 ~~A~ellltG~~~~A~eA~~~GLV~~vv~~~~l~~~a~~----------------------------------------- 258 (327)
T PLN02921 220 KKAREMWFLARFYTASEALKMGLVNTVVPLDELEGETVK----------------------------------------- 258 (327)
T ss_pred HHHHHHHHcCCcCCHHHHHHCCCceEEeCHHHHHHHHHH-----------------------------------------
Confidence 9 9999999999999999999999999998887654433
Q ss_pred CCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhh
Q 018384 268 GLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEV 347 (357)
Q Consensus 268 ~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~eg 347 (357)
++++|+++||.+++.+|++++..... .....+.|...+...+. ++|++||
T Consensus 259 --------------------------~a~~la~~~p~al~~~K~~l~~~~~~-~~~~~~~~~~~~~~~~~---s~d~~eg 308 (327)
T PLN02921 259 --------------------------WCREILRNSPTAIRVLKSALNAADDG-HAGLQELGGNATLLFYG---SEEGNEG 308 (327)
T ss_pred --------------------------HHHHHHccCHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHhc---CHHHHHH
Confidence 38999999999999999999876543 33333334466666666 9999999
Q ss_pred hhheeccCC
Q 018384 348 SNFQILNKH 356 (357)
Q Consensus 348 i~afl~~r~ 356 (357)
+++|+++|+
T Consensus 309 i~Af~ekr~ 317 (327)
T PLN02921 309 RTAYLEGRA 317 (327)
T ss_pred HHHHhccCC
Confidence 999999985
No 66
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-50 Score=379.07 Aligned_cols=249 Identities=19% Similarity=0.214 Sum_probs=209.9
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHH-HHH---hh-ccCC
Q 018384 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVS-LYH---FM-NQGK 108 (357)
Q Consensus 34 ~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~-~~~---~~-~~~~ 108 (357)
+.+.++++++|++||||||+++|+||.+|+.+|.+++++++.|+++++|||||.|++||+|+|+++ +.. .. ....
T Consensus 5 ~~v~~~~~~~Va~ItLnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvvVLtG~G~~FcaG~Dl~~~~~~~~~~~~~~~~ 84 (298)
T PRK12478 5 QTLLYTTAGPVATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAMMTDGR 84 (298)
T ss_pred eEEEEeccCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCccccccccchhcccccc
Confidence 468889999999999999999999999999999999999999999999999999999999999985 211 00 0000
Q ss_pred hHHHHHH---HH---HHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccc-cccCCCcHHHH
Q 018384 109 LEECKDF---FR---TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI-GFHPDAGASFY 181 (357)
Q Consensus 109 ~~~~~~~---~~---~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~-Gl~p~~g~~~~ 181 (357)
......+ .. ....++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++ |++| ++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~~~~- 161 (298)
T PRK12478 85 WDPGKDFAMVTARETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--TGMW- 161 (298)
T ss_pred cCchhhhhhhhhhhcchHHHHHHHHhCCCCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--hhHH-
Confidence 0001111 01 11235667889999999999999999999999999999999999999999997 8875 3333
Q ss_pred HhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHH
Q 018384 182 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRI 260 (357)
Q Consensus 182 l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (357)
+ +++|.. +++|++||++++|+||+++|||++|||++++++.+.+
T Consensus 162 ~-~~vG~~~A~~llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~---------------------------------- 206 (298)
T PRK12478 162 L-YRLSLAKVKWHSLTGRPLTGVQAAEAELINEAVPFERLEARVAE---------------------------------- 206 (298)
T ss_pred H-HHhhHHHHHHHHHcCCccCHHHHHHcCCcceecCHHHHHHHHHH----------------------------------
Confidence 2 458998 9999999999999999999999999999888754443
Q ss_pred HHHHHHcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhc-CCHHHHHHHHHHHHHHhhhcC
Q 018384 261 DIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTFDECLVREYRMSLQGVSRL 339 (357)
Q Consensus 261 ~~~~~~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~-~~l~~~l~~e~~~~~~~~~~~ 339 (357)
++++|+..||.+++.+|++++.... .+++++++.|...+...+.
T Consensus 207 ---------------------------------~a~~la~~~p~a~~~~K~~l~~~~~~~~l~~~~~~e~~~~~~~~~-- 251 (298)
T PRK12478 207 ---------------------------------VATELARIPLSQLQAQKLIVNQAYENMGLASTQTLGGILDGLMRN-- 251 (298)
T ss_pred ---------------------------------HHHHHHhCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhc--
Confidence 3889999999999999999998766 4699999999999988887
Q ss_pred CCCChh--------hhhhheeccCC
Q 018384 340 ISGDFY--------EVSNFQILNKH 356 (357)
Q Consensus 340 ~s~d~~--------egi~afl~~r~ 356 (357)
++|++ ||++||++||+
T Consensus 252 -s~d~~e~~~~~~~egv~Af~ekR~ 275 (298)
T PRK12478 252 -TPDALEFIRTAETQGVRAAVERRD 275 (298)
T ss_pred -ChhHHHHHHHHHHHHHHHHHHhcC
Confidence 99997 59999999986
No 67
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9.5e-50 Score=366.91 Aligned_cols=232 Identities=23% Similarity=0.264 Sum_probs=209.5
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHH
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (357)
++.+.++++++|++|+||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++.... ....
T Consensus 3 ~~~v~~~~~~~va~Itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~----~~~~ 78 (258)
T PRK06190 3 EPILLVETHDRVRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGDG----SAYG 78 (258)
T ss_pred CceEEEEeeCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhccc----chhh
Confidence 457889999999999999999999999999999999999999999999999999999999999999875321 1111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HH
Q 018384 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (357)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (357)
. ...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 79 ~--~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 156 (258)
T PRK06190 79 A--QDALPNPSPAWPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIGRAR 156 (258)
T ss_pred H--HHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhCHHHHH
Confidence 1 22345678889999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCC
Q 018384 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (357)
Q Consensus 192 ~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
+|+++|++++|+||+++|||++++|++++.+.+.
T Consensus 157 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~---------------------------------------------- 190 (258)
T PRK06190 157 RMSLTGDFLDAADALRAGLVTEVVPHDELLPRAR---------------------------------------------- 190 (258)
T ss_pred HHHHhCCccCHHHHHHcCCCeEecCHhHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999888765333
Q ss_pred HHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhh
Q 018384 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVS 337 (357)
Q Consensus 272 ~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~ 337 (357)
+++++|+.+||.+++.+|++++.....+++++++.|...+...+.
T Consensus 191 ---------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~ 235 (258)
T PRK06190 191 ---------------------RLAASIAGNNPAAVRALKASYDDGAAAQTGDALALEAEAARAHNR 235 (258)
T ss_pred ---------------------HHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHc
Confidence 348899999999999999999998888999999999999988886
No 68
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=9.2e-50 Score=367.05 Aligned_cols=246 Identities=16% Similarity=0.171 Sum_probs=212.8
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHH
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (357)
++.+.++++++|++|+||||++.|++|.+|+.+|.+++++++ +++++|||||.|++||+|+|++++..... .....
T Consensus 3 ~~~i~~~~~~~i~~itlnrp~~~Nal~~~~~~~L~~~l~~~~--~~vr~vVl~g~g~~FsaG~Dl~~~~~~~~--~~~~~ 78 (255)
T PRK07112 3 YQTIRVRQQGDVCFLQLHRPEAQNTINDRLIAECMDVLDRCE--HAATIVVLEGLPEVFCFGADFSAIAEKPD--AGRAD 78 (255)
T ss_pred CceEEEEeeCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhh--cCceEEEEEcCCCCcccCcCHHHHhhccc--cchhh
Confidence 456889999999999999999999999999999999999998 36999999999999999999998754211 11111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HH
Q 018384 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (357)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (357)
......+..++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++| +.+|++++|.. ++
T Consensus 79 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~~~a~ 157 (255)
T PRK07112 79 LIDAEPLYDLWHRLATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGTQKAH 157 (255)
T ss_pred hhhHHHHHHHHHHHHcCCCCEEEEEecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCHHHHH
Confidence 11123345678889999999999999999999999999999999999999999999999999865 56799999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCC
Q 018384 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (357)
Q Consensus 192 ~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
+|+++|++++|+||+++|||++++|+++. ...
T Consensus 158 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~~--~~~---------------------------------------------- 189 (255)
T PRK07112 158 YMTLMTQPVTAQQAFSWGLVDAYGANSDT--LLR---------------------------------------------- 189 (255)
T ss_pred HHHHhCCcccHHHHHHcCCCceecCcHHH--HHH----------------------------------------------
Confidence 99999999999999999999999986542 111
Q ss_pred HHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018384 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 351 (357)
Q Consensus 272 ~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~af 351 (357)
+++++|++.+|.+++.+|++++.. ...++++++.|.......+. ++|++||+++|
T Consensus 190 ---------------------~~a~~l~~~~p~a~~~~K~~~~~~-~~~~~~~~~~e~~~~~~~~~---~~~~~eg~~af 244 (255)
T PRK07112 190 ---------------------KHLLRLRCLNKAAVARYKSYASTL-DDTVAAARPAALAANIEMFA---DPENLRKIARY 244 (255)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHc---ChHHHHHHHHH
Confidence 237899999999999999999865 55789999999998888887 99999999999
Q ss_pred eccCC
Q 018384 352 ILNKH 356 (357)
Q Consensus 352 l~~r~ 356 (357)
+++|+
T Consensus 245 ~~kr~ 249 (255)
T PRK07112 245 VETGK 249 (255)
T ss_pred HcCCC
Confidence 99985
No 69
>PRK08321 naphthoate synthase; Validated
Probab=100.00 E-value=7.4e-50 Score=375.67 Aligned_cols=253 Identities=16% Similarity=0.181 Sum_probs=213.3
Q ss_pred CCceEEEE--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-------CccccccChHHHHHh
Q 018384 33 CNQVLVEG--KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-------RAFCAGGDIVSLYHF 103 (357)
Q Consensus 33 ~~~i~~~~--~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-------~~F~~G~Dl~~~~~~ 103 (357)
+..+.+++ +++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||||.| ++||+|+|++++...
T Consensus 22 ~~~i~~~~~~~~~va~itlnrP~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~~~~~ 101 (302)
T PRK08321 22 FTDITYHRAVDQGTVRIAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRD 101 (302)
T ss_pred ceeEEEEEecCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhhhccc
Confidence 34588888 899999999999999999999999999999999999999999999998 599999999875321
Q ss_pred h---ccCCh-H--HHHHHHH-HHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEe-CceEEecccccccccCC
Q 018384 104 M---NQGKL-E--ECKDFFR-TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPD 175 (357)
Q Consensus 104 ~---~~~~~-~--~~~~~~~-~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~-~~a~f~~pe~~~Gl~p~ 175 (357)
. ..... . ....... ....+...+..+||||||+|||+|+|||++|+++||+||++ ++++|++||+++|++|+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~ 181 (302)
T PRK08321 102 GYQYAEGDEADTVDPARAGRLHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDG 181 (302)
T ss_pred cccccccccccchhhhHHHHHHHHHHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCC
Confidence 0 00000 0 0011111 12345667889999999999999999999999999999999 69999999999999999
Q ss_pred CcHHHHHhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChh
Q 018384 176 AGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKN 254 (357)
Q Consensus 176 ~g~~~~l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (357)
+|++++|++++|.. +++|++||++++|+||+++|||+++||++++.+.+.
T Consensus 182 ~~~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~----------------------------- 232 (302)
T PRK08321 182 GYGSAYLARQVGQKFAREIFFLGRTYSAEEAHDMGAVNAVVPHAELETEAL----------------------------- 232 (302)
T ss_pred chHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCceEeeCHHHHHHHHH-----------------------------
Confidence 99999999999999 999999999999999999999999999888765443
Q ss_pred hHHHHHHHHHHHcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHH
Q 018384 255 SVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQ 334 (357)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~ 334 (357)
+++++|++.+|.+++.+|++++.... .+.+....|.+.+..
T Consensus 233 --------------------------------------~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~ 273 (302)
T PRK08321 233 --------------------------------------EWAREINGKSPTAMRMLKYAFNLTDD-GLVGQQLFAGEATRL 273 (302)
T ss_pred --------------------------------------HHHHHHHhCCHHHHHHHHHHHHhhhc-ccHHHHHHHHHHHHH
Confidence 34899999999999999999987654 344445567777777
Q ss_pred hhhcCCCCChhhhhhheeccCC
Q 018384 335 GVSRLISGDFYEVSNFQILNKH 356 (357)
Q Consensus 335 ~~~~~~s~d~~egi~afl~~r~ 356 (357)
.+. ++|++||+++|+++|+
T Consensus 274 ~~~---~~d~~egi~af~ekr~ 292 (302)
T PRK08321 274 AYM---TDEAQEGRDAFLEKRD 292 (302)
T ss_pred Hhc---CHHHHHHHHHHhccCC
Confidence 776 9999999999999985
No 70
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=7.5e-48 Score=383.46 Aligned_cols=247 Identities=15% Similarity=0.074 Sum_probs=218.0
Q ss_pred eEEEEeCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHHc-CCCceEEEEecCCCc-cccccChHHH
Q 018384 36 VLVEGKANSRMAILNRPSAL-------------NALNTNMGAKLNKLFKAWEN-DPNIGFVSMKGSGRA-FCAGGDIVSL 100 (357)
Q Consensus 36 i~~~~~~~v~~I~ln~p~~~-------------Nal~~~~~~~L~~~l~~~~~-d~~v~~vvl~g~g~~-F~~G~Dl~~~ 100 (357)
+.++++++|++||||||++. |+||.+|+.+|.+++.+++. |+++++|||||.|+. ||+|.|++..
T Consensus 260 v~~~~~~~va~itlnrP~~~~~~~~~~~~~~~~Nal~~~~~~~L~~a~~~~~~~d~~vr~vVl~g~G~~~F~aG~Dl~~~ 339 (546)
T TIGR03222 260 VAIDRAARTATITLKGPKAAQPADIAAIVAQGANWWPLKLARELDDAILHLRTNELDIGLWVFRTQGDAELVLAADALLE 339 (546)
T ss_pred EEEeccCCEEEEEecChhhcCccccccccccccCcCCHHHHHHHHHHHHHHhhCCCCeEEEEEEcCCCCceecCcCcccc
Confidence 34566899999999999999 99999999999999999984 599999999999987 9999999842
Q ss_pred HHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE-ccceechh-hhhhccCCeEEE-------eCceEEeccccccc
Q 018384 101 YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL-NGVTMGGG-AGVSIPGTFRVA-------CGKTVFATPETLIG 171 (357)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v-~G~a~GgG-~~lal~~D~~ia-------~~~a~f~~pe~~~G 171 (357)
.. .+...........+.++.+|..+||||||+| ||+|+||| ++|+++||+||+ +++++|++||+++|
T Consensus 340 ~~----~~~~~~~~~~~~~~~~~~~l~~~~kpviAav~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lG 415 (546)
T TIGR03222 340 AH----KDHWFVRETIGYLRRTLARLDVSSRSLFALIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFG 415 (546)
T ss_pred cc----ccchhHHHHHHHHHHHHHHHHcCCCCEEEEECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccc
Confidence 11 1111112223334567889999999999999 89999999 999999999999 89999999999999
Q ss_pred ccCCCcHHHHHhhcC-hHH-H--HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhc
Q 018384 172 FHPDAGASFYLSHLP-GHL-G--EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSD 247 (357)
Q Consensus 172 l~p~~g~~~~l~r~~-g~~-a--~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 247 (357)
++|++|++++|++++ |.. + .++++||++++|+||+++|||++++|++++.+.+..
T Consensus 416 l~p~~gg~~~L~~~v~G~~~a~~~~~~ltg~~i~A~eA~~~Glv~~vv~~~~l~~~a~~--------------------- 474 (546)
T TIGR03222 416 LYPMVNGLSRLATRFYAEPAPVAAVRDKIGQALDAEEAERLGLVTAAPDDIDWEDEIRI--------------------- 474 (546)
T ss_pred cCCCcCcHHHHHHHhcCchhHHHHHHHHhCCCCCHHHHHHcCCcccccCchHHHHHHHH---------------------
Confidence 999999999999998 887 7 559999999999999999999999999888654443
Q ss_pred cCCCChhhHHHHHHHHHHHcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHH-HH
Q 018384 248 LVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDEC-LV 326 (357)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~-l~ 326 (357)
++++|++.||.+++.+|++++.....+++++ +.
T Consensus 475 ----------------------------------------------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~ 508 (546)
T TIGR03222 475 ----------------------------------------------ALEERASFSPDALTGLEANLRFAGPETMETRIFG 508 (546)
T ss_pred ----------------------------------------------HHHHHHhcCHHHHHHHHHHHhhcCCcChhhhHHH
Confidence 4899999999999999999999999999999 99
Q ss_pred HHHHHHHHhhhcCCCCChhh---hhhheeccCC
Q 018384 327 REYRMSLQGVSRLISGDFYE---VSNFQILNKH 356 (357)
Q Consensus 327 ~e~~~~~~~~~~~~s~d~~e---gi~afl~~r~ 356 (357)
+|...+..++. ++|.+| |+++|++||+
T Consensus 509 ~e~~~~~~~~~---~~d~~e~~~g~~af~ekr~ 538 (546)
T TIGR03222 509 RLTAWQNWIFN---RPNAVGENGALKVYGSGKK 538 (546)
T ss_pred HHHHHHHHHhc---CCcccchhhHHHHHccCCC
Confidence 99999999988 999999 9999999997
No 71
>PRK05869 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=8e-48 Score=346.68 Aligned_cols=214 Identities=21% Similarity=0.287 Sum_probs=189.0
Q ss_pred CCCceEEEEe-----CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhcc
Q 018384 32 LCNQVLVEGK-----ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 106 (357)
Q Consensus 32 ~~~~i~~~~~-----~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~ 106 (357)
|+++|.++.. ++|++|+||||++ |++|.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++....
T Consensus 1 ~~~~~~~~~~~~~~~~~i~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~-- 77 (222)
T PRK05869 1 MNEFVNVVVSDGSQDAGLATLLLSRPPT-NALTRQVYREIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTLS-- 77 (222)
T ss_pred CccchhhhcccCcccCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcCcCcCHHHHhccC--
Confidence 4566766665 8899999999985 9999999999999999999999999999999999999999999875421
Q ss_pred CChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcC
Q 018384 107 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP 186 (357)
Q Consensus 107 ~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~ 186 (357)
......+...+..++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++.+|++++
T Consensus 78 --~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~i 155 (222)
T PRK05869 78 --AQEADTAARVRQQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAA 155 (222)
T ss_pred --hhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHHh
Confidence 112222334456788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHH
Q 018384 187 GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDK 265 (357)
Q Consensus 187 g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (357)
|.. +++++++|++++|+||+++|||++++|++++.+.+.
T Consensus 156 g~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------- 195 (222)
T PRK05869 156 GPSRAKELVFSGRFFDAEEALALGLIDEMVAPDDVYDAAA---------------------------------------- 195 (222)
T ss_pred CHHHHHHHHHcCCCcCHHHHHHCCCCCEeeCchHHHHHHH----------------------------------------
Confidence 999 999999999999999999999999999888765333
Q ss_pred HcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhh
Q 018384 266 CFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGR 317 (357)
Q Consensus 266 ~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~ 317 (357)
+++++|+..+|.+++.+|++++...
T Consensus 196 ---------------------------~~a~~ia~~~~~a~~~~K~~~~~~~ 220 (222)
T PRK05869 196 ---------------------------AWARRFLDGPPHALAAAKAGISDVY 220 (222)
T ss_pred ---------------------------HHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 3488999999999999999998654
No 72
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=1.9e-47 Score=381.83 Aligned_cols=245 Identities=15% Similarity=0.065 Sum_probs=215.9
Q ss_pred EEEeCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHHc-CCCceEEEEecCC-CccccccChHHHHH
Q 018384 38 VEGKANSRMAILNRPSAL-------------NALNTNMGAKLNKLFKAWEN-DPNIGFVSMKGSG-RAFCAGGDIVSLYH 102 (357)
Q Consensus 38 ~~~~~~v~~I~ln~p~~~-------------Nal~~~~~~~L~~~l~~~~~-d~~v~~vvl~g~g-~~F~~G~Dl~~~~~ 102 (357)
++++++|++||||||++. |+||.+|+.+|.+++++++. |+++++|||||.| ++||+|+|++....
T Consensus 266 ~~~~~~va~itlnrP~~~Na~~~~~~~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG~Dl~~~~~ 345 (550)
T PRK08184 266 IDRAARTATITVKAPTAAQPADIAGIVAAGAAWWPLQMARELDDAILHLRTNELDIGTWVLKTEGDAAAVLAADATLLAH 345 (550)
T ss_pred EEccCCEEEEEEeCcccccccccccccccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeCCChhhhcc
Confidence 345689999999999988 68999999999999999986 7999999999999 59999999873211
Q ss_pred hhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEc-cceechh-hhhhccCCeEEEe-------CceEEeccccccccc
Q 018384 103 FMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILN-GVTMGGG-AGVSIPGTFRVAC-------GKTVFATPETLIGFH 173 (357)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~-G~a~GgG-~~lal~~D~~ia~-------~~a~f~~pe~~~Gl~ 173 (357)
.+.............++.++..+||||||+|| |+|+||| ++|+++||+||++ ++++|++||+++|++
T Consensus 346 ----~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~pe~~~Gl~ 421 (550)
T PRK08184 346 ----KDHWLVRETRGYLRRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAITLSALNFGLY 421 (550)
T ss_pred ----cchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECccccccCC
Confidence 11111122233445678889999999999997 9999999 9999999999999 999999999999999
Q ss_pred CCCcHHHHHhhc-ChHH-HHHH--HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccC
Q 018384 174 PDAGASFYLSHL-PGHL-GEFL--ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLV 249 (357)
Q Consensus 174 p~~g~~~~l~r~-~g~~-a~~l--~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 249 (357)
|++|++++|+++ +|.. ++++ +++|++++|+||+++|||++++|++++++.+..
T Consensus 422 p~~gg~~~L~r~~vG~~~A~~~~l~~tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~----------------------- 478 (550)
T PRK08184 422 PMVNGLSRLARRFYGEPDPLAAVRAKIGQPLDADAAEELGLVTAAPDDIDWEDEVRI----------------------- 478 (550)
T ss_pred CCCCcHHHhHHHhcChHHHHHHHHHHhCCcCCHHHHHHcCCcccccChHHHHHHHHH-----------------------
Confidence 999999999988 6998 8886 589999999999999999999999888754443
Q ss_pred CCChhhHHHHHHHHHHHcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHH-HHHH
Q 018384 250 YPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDEC-LVRE 328 (357)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~-l~~e 328 (357)
++++|+++||.+++.+|++++.....+++++ +.+|
T Consensus 479 --------------------------------------------~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e 514 (550)
T PRK08184 479 --------------------------------------------ALEERASLSPDALTGMEANLRFAGPETMETRIFGRL 514 (550)
T ss_pred --------------------------------------------HHHHHHhCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 3899999999999999999999999999999 9999
Q ss_pred HHHHHHhhhcCCCCChhh---hhhheeccCC
Q 018384 329 YRMSLQGVSRLISGDFYE---VSNFQILNKH 356 (357)
Q Consensus 329 ~~~~~~~~~~~~s~d~~e---gi~afl~~r~ 356 (357)
...+..+++ ++|.+| |+++|++||+
T Consensus 515 ~~~~~~~~~---~~d~~e~~~g~~af~ekr~ 542 (550)
T PRK08184 515 TAWQNWIFQ---RPNAVGEKGALKVYGTGQK 542 (550)
T ss_pred HHHHHHHhc---CCcccccchHHHHhccCCC
Confidence 999999988 999999 9999999997
No 73
>PRK08788 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.2e-46 Score=349.73 Aligned_cols=251 Identities=16% Similarity=0.160 Sum_probs=201.2
Q ss_pred cCCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHc-----CCCceEEEEecC-CCccccccChHHHHHhh
Q 018384 31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWEN-----DPNIGFVSMKGS-GRAFCAGGDIVSLYHFM 104 (357)
Q Consensus 31 ~~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~-----d~~v~~vvl~g~-g~~F~~G~Dl~~~~~~~ 104 (357)
...-.|.++.+++|++|+|| |++.|+||.+|+.+|.+++++++. |+++++|||||. |++||+|+|++++....
T Consensus 14 ~~~~~i~~e~~~~ia~itl~-p~~~Nal~~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~~~~~~ 92 (287)
T PRK08788 14 LSQLRVYYEEERNVMWMYMR-AQPRPCFNLELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLALFAELI 92 (287)
T ss_pred cCceEEEEEccCCEEEEEEC-CCCCCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHHHhhhc
Confidence 33445667778999999996 888999999999999999999998 899999999999 79999999999875321
Q ss_pred ccCChHHHHHHHHHHHHHHHHHh---cCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHH
Q 018384 105 NQGKLEECKDFFRTLYSFIYLLG---THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFY 181 (357)
Q Consensus 105 ~~~~~~~~~~~~~~~~~l~~~i~---~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~ 181 (357)
...+......+...+...+.++. .+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~g~~~~ 172 (287)
T PRK08788 93 RAGDRDALLAYARACVDGVHAFHRGFGAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSF 172 (287)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCchHHHH
Confidence 11111111222222233333333 799999999999999999999999999999999999999999999999999999
Q ss_pred HhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHH
Q 018384 182 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRI 260 (357)
Q Consensus 182 l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (357)
|++++|.. +++|++||+.++|+||+++|||++++|++++.+.+.+
T Consensus 173 l~~~vG~~~A~ellltG~~l~A~eA~~~GLV~~vv~~~el~~~a~~---------------------------------- 218 (287)
T PRK08788 173 LARRVGPKLAEELILSGKLYTAEELHDMGLVDVLVEDGQGEAAVRT---------------------------------- 218 (287)
T ss_pred HHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecCchHHHHHHHH----------------------------------
Confidence 99999999 9999999999999999999999999998887654433
Q ss_pred HHHHHHcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCC
Q 018384 261 DIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLI 340 (357)
Q Consensus 261 ~~~~~~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~ 340 (357)
++++|+.. |.++...|+..+.....++++.++.|...+....+ .
T Consensus 219 ---------------------------------~a~~ia~~-~~~~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 262 (287)
T PRK08788 219 ---------------------------------FIRKSKRK-LNGWRAMLRARRRVNPLSLEELMDITEIWVDAALQ--L 262 (287)
T ss_pred ---------------------------------HHHHHhcC-ccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhh--c
Confidence 37788876 77777777777766667889999988777765554 1
Q ss_pred CCChhhhhhhee
Q 018384 341 SGDFYEVSNFQI 352 (357)
Q Consensus 341 s~d~~egi~afl 352 (357)
.+.-++-|..|.
T Consensus 263 ~~~~~~~~~~~~ 274 (287)
T PRK08788 263 EEKDLRTMERLV 274 (287)
T ss_pred ccccHHHHHHHH
Confidence 344455555554
No 74
>PRK08290 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.3e-47 Score=354.62 Aligned_cols=235 Identities=21% Similarity=0.263 Sum_probs=201.8
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhc-c-----
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-Q----- 106 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~-~----- 106 (357)
++.+.++.+++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++..... .
T Consensus 3 ~~~v~~~~~~~Va~ItlnrP~~~Nal~~~~~~eL~~~l~~~~~d~~vrvvVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~ 82 (288)
T PRK08290 3 YEYVRYEVAGRIARITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRDPGPDQ 82 (288)
T ss_pred CceEEEEeeCCEEEEEecCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCccccCCCcccccccccccccccc
Confidence 4568899999999999999999999999999999999999999999999999999999999999997632110 0
Q ss_pred -----------CC-hHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccC
Q 018384 107 -----------GK-LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP 174 (357)
Q Consensus 107 -----------~~-~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p 174 (357)
.. ..........+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+ |
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl-~ 161 (288)
T PRK08290 83 HPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI-P 161 (288)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccCc-C
Confidence 00 0011112233456777889999999999999999999999999999999999999999999998 4
Q ss_pred CCcHHHHHhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCCh
Q 018384 175 DAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDK 253 (357)
Q Consensus 175 ~~g~~~~l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (357)
+ ++++++++++|.. +++|++||+.|+|+||+++|||+++||++++.+.+.
T Consensus 162 ~-~~~~~l~~~iG~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~---------------------------- 212 (288)
T PRK08290 162 G-VEYFAHPWELGPRKAKELLFTGDRLTADEAHRLGMVNRVVPRDELEAETL---------------------------- 212 (288)
T ss_pred c-chHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHH----------------------------
Confidence 4 4567789999999 999999999999999999999999999887765433
Q ss_pred hhHHHHHHHHHHHcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcC-CHHHHHHHHHHHH
Q 018384 254 NSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQ-TFDECLVREYRMS 332 (357)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~-~l~~~l~~e~~~~ 332 (357)
+++++|++.||.+++.+|++++..... +++++++.|....
T Consensus 213 ---------------------------------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~ 253 (288)
T PRK08290 213 ---------------------------------------ELARRIAAMPPFGLRLTKRAVNQTLDAQGFRAALDAVFDLH 253 (288)
T ss_pred ---------------------------------------HHHHHHHhCCHHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 348999999999999999999988765 6999999999998
Q ss_pred HHhh
Q 018384 333 LQGV 336 (357)
Q Consensus 333 ~~~~ 336 (357)
...+
T Consensus 254 ~~~~ 257 (288)
T PRK08290 254 QLGH 257 (288)
T ss_pred HHcc
Confidence 7776
No 75
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=7.2e-47 Score=391.57 Aligned_cols=288 Identities=18% Similarity=0.217 Sum_probs=225.9
Q ss_pred ceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHH
Q 018384 35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (357)
Q Consensus 35 ~i~~~~-~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (357)
.+.++. +++|++||||||++.|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++..... .......
T Consensus 7 ~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~-~~~~~~~ 85 (715)
T PRK11730 7 TLQVDWLEDGIAELVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLFA-APEEELS 85 (715)
T ss_pred eEEEEEcCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcEEEEEECCCCccccCcCHHHHhhhcc-CCHHHHH
Confidence 567774 78999999999999999999999999999999999999999999999999999999998754211 1122233
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHH
Q 018384 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (357)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (357)
.+....+.++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. |++
T Consensus 86 ~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~~A~~ 165 (715)
T PRK11730 86 QWLHFANSIFNRLEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGADNALE 165 (715)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHHHHHH
Confidence 4555667788899999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHH-hhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCC
Q 018384 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG-KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (357)
Q Consensus 193 l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
|++||++++|+||+++||||+++|++++.+.+..++ +++..+ ........ ....+..... +..
T Consensus 166 llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~-~~~~~~~~---~~~~p~a~~~------~~~------ 229 (715)
T PRK11730 166 WIAAGKDVRAEDALKVGAVDAVVAPEKLQEAALALLKQAIAGK-LDWKARRQ---PKLEPLKLSK------IEA------ 229 (715)
T ss_pred HHHcCCcCCHHHHHHCCCCeEecCHHHHHHHHHHHHHHHhhcC-CccccccC---cccccccccc------hhH------
Confidence 999999999999999999999999988877666664 322211 00000000 0000000000 000
Q ss_pred HHHHHHHHhcccCCCCCchHHHH-HHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018384 272 VEEIIDSLESEASLINDPWCGST-LRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 350 (357)
Q Consensus 272 ~e~i~~~l~~~~~~~~~~~a~~~-a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~a 350 (357)
...+ .++++. .++...+.|.++ .++++++.+...+++++++.|.+.+..++. |+|++||+++
T Consensus 230 -~~~~------------~~~k~~~~~~~~~~~pa~~-~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~d~~egi~a 292 (715)
T PRK11730 230 -MMSF------------TTAKGMVAQKAGKHYPAPM-TAVKTIEAAAGLGRDEALELEAKGFVKLAK---TNVARALVGI 292 (715)
T ss_pred -HHHH------------HHHHHHHHHhhccCCccHH-HHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence 0000 111111 234556666666 688899998888999999999999999997 9999999999
Q ss_pred eeccCC
Q 018384 351 QILNKH 356 (357)
Q Consensus 351 fl~~r~ 356 (357)
|+++|.
T Consensus 293 F~~~~~ 298 (715)
T PRK11730 293 FLNDQY 298 (715)
T ss_pred HHHHHH
Confidence 999874
No 76
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.5e-46 Score=339.12 Aligned_cols=225 Identities=15% Similarity=0.121 Sum_probs=199.1
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHH
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (357)
.+.+.++.+++|++||||||+ .|++|.+|+.+|.++++.++ +++++|||+|.|++||+|+|++++... ....
T Consensus 2 ~~~i~~~~~~~v~~itln~~~-~Nal~~~~~~~l~~~l~~~~--~~~~vvvl~g~g~~F~~G~Dl~~~~~~-----~~~~ 73 (229)
T PRK06213 2 SELVSYTLEDGVATITLDDGK-VNALSPAMIDALNAALDQAE--DDRAVVVITGQPGIFSGGFDLKVMTSG-----AQAA 73 (229)
T ss_pred cceEEEEecCCEEEEEeCCCC-CCCCCHHHHHHHHHHHHHhh--ccCcEEEEeCCCCceEcCcCHHHHhcc-----hHhH
Confidence 456889999999999999985 79999999999999999988 457999999999999999999987531 2223
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCc-eEEecccccccccCCCcHHHHHhhcChHH-H
Q 018384 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (357)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (357)
..+......++.++.++||||||+|||+|+|||++|+++||+||++++ ++|++||+++|++|++|+..++++++|.. +
T Consensus 74 ~~~~~~~~~l~~~l~~~~kPvIAav~G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~~~a 153 (229)
T PRK06213 74 IALLTAGSTLARRLLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTPSAF 153 (229)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEcCeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCHHHH
Confidence 345556677888999999999999999999999999999999999999 99999999999998888888899999998 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCC
Q 018384 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (357)
Q Consensus 191 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
++++++|++++|+||+++||||+++|++++.+.+.
T Consensus 154 ~~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 188 (229)
T PRK06213 154 QRAVINAEMFDPEEAVAAGFLDEVVPPEQLLARAQ--------------------------------------------- 188 (229)
T ss_pred HHHHHcCcccCHHHHHHCCCceeccChHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999888764333
Q ss_pred CHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHH
Q 018384 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMS 332 (357)
Q Consensus 271 ~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~ 332 (357)
+++++|++.+|.++..+|++++......++++++.|.+.+
T Consensus 189 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~ 228 (229)
T PRK06213 189 ----------------------AAARELAGLNMGAHAATKLKVRAAALEAIRAAIEGDAAEF 228 (229)
T ss_pred ----------------------HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhchhhhhhhc
Confidence 3488999999999999999999888888888888887653
No 77
>PRK08272 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-45 Score=346.69 Aligned_cols=217 Identities=20% Similarity=0.238 Sum_probs=184.6
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccC---C
Q 018384 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG---K 108 (357)
Q Consensus 32 ~~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~---~ 108 (357)
.++.+.++.+++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||+|.|++||+|+|++++....... .
T Consensus 8 ~~~~v~~e~~~~V~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~G~G~~FcaG~Dl~~~~~~~~~~~~~~ 87 (302)
T PRK08272 8 NLKTMTYEVTGRIARITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSGGGGG 87 (302)
T ss_pred CCCeEEEEeECCEEEEEecCccccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCcCHHHHhhccccccccc
Confidence 3567899999999999999999999999999999999999999999999999999999999999999875422100 0
Q ss_pred ----------------hHHH--HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccc
Q 018384 109 ----------------LEEC--KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI 170 (357)
Q Consensus 109 ----------------~~~~--~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~ 170 (357)
.... ..+......++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~~~ 167 (302)
T PRK08272 88 AYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPTRV 167 (302)
T ss_pred ccccccccccccccccccchhhHHHHHHHHHHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcchhc
Confidence 0000 1223455667888999999999999999999999999999999999999999999998
Q ss_pred cccCCCcHHHHHhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccC
Q 018384 171 GFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLV 249 (357)
Q Consensus 171 Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 249 (357)
|.+|+. ..+++++|.. |++|++||++++|+||+++|||++++|++++.+.+..
T Consensus 168 gg~~~~---~~~~~~vG~~~A~~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~----------------------- 221 (302)
T PRK08272 168 WGVPAT---GMWAYRLGPQRAKRLLFTGDCITGAQAAEWGLAVEAVPPEELDERTER----------------------- 221 (302)
T ss_pred ccCChH---HHHHHHhhHHHHHHHHHcCCccCHHHHHHcCCCceecCHHHHHHHHHH-----------------------
Confidence 666643 3467889999 9999999999999999999999999998887654443
Q ss_pred CCChhhHHHHHHHHHHHcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhc
Q 018384 250 YPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF 318 (357)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~ 318 (357)
++++|++.||.+++.+|++++...+
T Consensus 222 --------------------------------------------la~~ia~~~~~a~~~~K~~l~~~~~ 246 (302)
T PRK08272 222 --------------------------------------------LVERIAAVPVNQLAMVKLAVNSALL 246 (302)
T ss_pred --------------------------------------------HHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 3788888999999999999987654
No 78
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=8.1e-45 Score=340.63 Aligned_cols=274 Identities=17% Similarity=0.228 Sum_probs=217.7
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCChHHHHHHHHHHHHH
Q 018384 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSF 122 (357)
Q Consensus 44 v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l 122 (357)
+++|+||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..... ........+...++.+
T Consensus 38 ~A~ItLNRP~k~NAls~~ml~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~~-~~~~~~~~~~~~~~~l 116 (360)
T TIGR03200 38 NAWIILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYA-GNPQEYRQYMRLFNDM 116 (360)
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhcc-cChhHHHHHHHHHHHH
Confidence 556999999999999999999999999999999999999999999 79999999998754211 1122233444555678
Q ss_pred HHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHHHHhcCCCCC
Q 018384 123 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLN 201 (357)
Q Consensus 123 ~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~i~ 201 (357)
+..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. |++++++|++++
T Consensus 117 ~~~i~~~pKPVIAAVnG~AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~~rA~~llltGe~~s 196 (360)
T TIGR03200 117 VSAILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCEQAMVSGTLCEPWS 196 (360)
T ss_pred HHHHHhCCCCEEEEECCEeeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCHHHHHHHHHhCCcCc
Confidence 8889999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHcCccceecCCCCh------------hHHHHHHHhhhcCCH---HHHHHHHHHhhccCCCChhhHHHHHHHHHHH
Q 018384 202 GAEMMACGLATHYSVSEKL------------PLIEEELGKLVTDDP---SVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 266 (357)
Q Consensus 202 a~eA~~~GLv~~vv~~~~l------------~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (357)
|+||+++|||++++|+.++ ++..+.+.++...++ .++++.|..+......
T Consensus 197 A~EA~~~GLVd~VVp~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~--------------- 261 (360)
T TIGR03200 197 AHKAKRLGIIMDVVPALKVDGKFVANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKELIKQGTID--------------- 261 (360)
T ss_pred HHHHHHcCChheecCchhcCcchhcCcccchHHHHHHHhHHhcCCCcchhHHHHHHHHHhcccch---------------
Confidence 9999999999999999887 444555544444333 2455555554432110
Q ss_pred cCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhh
Q 018384 267 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 346 (357)
Q Consensus 267 ~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~e 346 (357)
...+- +-..+++.+++...|..+.-+++-+|.......+..-..-...+..-+ ..+..+
T Consensus 262 -----~~~l~------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 320 (360)
T TIGR03200 262 -----LSLLD------------EAVEALCAKLLNTFPECLTKSIEELRKPKLFAWNQNKENSRAWLALNM----MNEART 320 (360)
T ss_pred -----HhHHH------------HHHHHHHHHHHHhchHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHhhc----ccccch
Confidence 00000 111235778888999999999999998776666666555555554444 468899
Q ss_pred hhhheecc
Q 018384 347 VSNFQILN 354 (357)
Q Consensus 347 gi~afl~~ 354 (357)
|++||-++
T Consensus 321 ~~~~~~~~ 328 (360)
T TIGR03200 321 GFRAFNEG 328 (360)
T ss_pred hhHHHhcc
Confidence 99999994
No 79
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=3.6e-46 Score=318.05 Aligned_cols=253 Identities=21% Similarity=0.269 Sum_probs=230.0
Q ss_pred CceEEEE----eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCC
Q 018384 34 NQVLVEG----KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGK 108 (357)
Q Consensus 34 ~~i~~~~----~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~ 108 (357)
..+.+++ +.||.+|-+|||.+.|+|+.-|+.+|.++++.+..|+.+++|+|.+.- +.||+|.||++-..+ .
T Consensus 27 ~Ev~v~~L~g~~~GItvl~mNRpa~kNsl~r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~M----s 102 (291)
T KOG1679|consen 27 NEVFVRRLTGKDEGITILNMNRPAKKNSLGRVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTM----S 102 (291)
T ss_pred ceeeeeeccCCCCCeEEEecCChhhhccHHHHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcC----C
Confidence 4455553 568999999999999999999999999999999999999999999985 899999999997654 4
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChH
Q 018384 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188 (357)
Q Consensus 109 ~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~ 188 (357)
..+...|...+..++..|.++|.||||+|+|.++|||++|+++||+|+|+++++|+++|++++++|+.|++++|+|++|.
T Consensus 103 ~~Ev~~fV~~lR~~~~dIe~Lp~P~IAAidG~ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg~ 182 (291)
T KOG1679|consen 103 PSEVTRFVNGLRGLFNDIERLPQPVIAAIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVGV 182 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccceehhcchhcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHhH
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHc
Q 018384 189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF 267 (357)
Q Consensus 189 ~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (357)
. +++|++||+.+++.||..+|||+++|...+-.+.+..
T Consensus 183 alaKELIftarvl~g~eA~~lGlVnhvv~qneegdaa~~----------------------------------------- 221 (291)
T KOG1679|consen 183 ALAKELIFTARVLNGAEAAKLGLVNHVVEQNEEGDAAYQ----------------------------------------- 221 (291)
T ss_pred HHHHhHhhhheeccchhHHhcchHHHHHhcCccccHHHH-----------------------------------------
Confidence 9 9999999999999999999999999976543222111
Q ss_pred CCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhh
Q 018384 268 GLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEV 347 (357)
Q Consensus 268 ~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~eg 347 (357)
-+.+++++|..+.|.+++++|..++.+.+.++..++..|..-..+.+. +.|.-||
T Consensus 222 ----------------------kal~lA~eilp~gPiavr~aKlAIn~G~evdiasgl~iEe~CYaq~i~---t~drLeg 276 (291)
T KOG1679|consen 222 ----------------------KALELAREILPQGPIAVRLAKLAINLGMEVDIASGLSIEEMCYAQIIP---TKDRLEG 276 (291)
T ss_pred ----------------------HHHHHHHHhccCCchhhhHHHHHhccCceecccccccHHHHHHHhcCc---HHHHHHH
Confidence 122568999999999999999999999999999999999998889988 9999999
Q ss_pred hhheeccCC
Q 018384 348 SNFQILNKH 356 (357)
Q Consensus 348 i~afl~~r~ 356 (357)
+.+|-|||+
T Consensus 277 laaf~ekr~ 285 (291)
T KOG1679|consen 277 LAAFKEKRK 285 (291)
T ss_pred HHHHHhhcC
Confidence 999999986
No 80
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=7.7e-45 Score=376.42 Aligned_cols=285 Identities=18% Similarity=0.210 Sum_probs=222.5
Q ss_pred CCceEEEE-eCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCCh
Q 018384 33 CNQVLVEG-KANSRMAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKL 109 (357)
Q Consensus 33 ~~~i~~~~-~~~v~~I~ln~p-~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~ 109 (357)
...+.++. +++|++|||||| ++.|+||.+|+.+|.+++++++.|+++++|||+|.+ ++||+|+|++++.... ..
T Consensus 4 ~~~~~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~~---~~ 80 (708)
T PRK11154 4 ASAFTLNVREDNIAVITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAACK---TA 80 (708)
T ss_pred CceEEEEEcCCCEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhccC---CH
Confidence 34567777 689999999999 589999999999999999999999999999999975 8999999999875321 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCc--eEEecccccccccCCCcHHHHHhhcCh
Q 018384 110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPG 187 (357)
Q Consensus 110 ~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~~Gl~p~~g~~~~l~r~~g 187 (357)
.....+......++.++.++||||||+|||+|+|||++|+++||+||++++ ++|++||+++|++|++|++++|++++|
T Consensus 81 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG 160 (708)
T PRK11154 81 QEAEALARQGQQLFAEIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIG 160 (708)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcC
Confidence 222334445567888999999999999999999999999999999999996 589999999999999999999999999
Q ss_pred HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHH-hhccCCCChhhHHHHHHHHHH
Q 018384 188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEK-YSDLVYPDKNSVIHRIDIVDK 265 (357)
Q Consensus 188 ~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 265 (357)
.. |++|+++|++++|+||+++||||+++|++++.+.+.++++.....+..+. +.. +... .+
T Consensus 161 ~~~A~~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~A~~~~~~~~~~~--~~~~~~~~-~p-------------- 223 (708)
T PRK11154 161 VSTALDMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKGKPARRPLP--VRERLLEG-NP-------------- 223 (708)
T ss_pred HHHHHHHHHhCCcCCHHHHHHCCCCcEecChHHHHHHHHHHHHhcCCccCcCC--chhhhccc-Cc--------------
Confidence 99 99999999999999999999999999998887666655422100000000 000 0000 00
Q ss_pred HcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChh
Q 018384 266 CFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFY 345 (357)
Q Consensus 266 ~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~ 345 (357)
.....++ +++.+.+.+-.+....|+..+|++++.+...+++++++.|.+.+..++. |+|++
T Consensus 224 ----~~~~~~~------------~~~~~~~~~~~~g~~~A~~~~k~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~~~~ 284 (708)
T PRK11154 224 ----LGRALLF------------KQARKKTLAKTQGNYPAPERILDVVRTGLEKGMSSGYEAEARAFGELAM---TPESA 284 (708)
T ss_pred ----hhHHHHH------------HHHHHHHHHhcccCChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHH
Confidence 0000011 1111122333344457999999999999888999999999999999997 99999
Q ss_pred hhhhheeccCC
Q 018384 346 EVSNFQILNKH 356 (357)
Q Consensus 346 egi~afl~~r~ 356 (357)
||+++|+-+|.
T Consensus 285 ~~~~aF~~~~~ 295 (708)
T PRK11154 285 ALRSIFFATTE 295 (708)
T ss_pred HHHHHHHHHHH
Confidence 99999987653
No 81
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=100.00 E-value=2.9e-44 Score=371.33 Aligned_cols=277 Identities=19% Similarity=0.223 Sum_probs=219.1
Q ss_pred EEeCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHHcCCCceEEEE-ecCCCccccccChHHHHHhhccCChHHHHHHH
Q 018384 39 EGKANSRMAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGFVSM-KGSGRAFCAGGDIVSLYHFMNQGKLEECKDFF 116 (357)
Q Consensus 39 ~~~~~v~~I~ln~p-~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl-~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~ 116 (357)
+.+++|++|||||| ++.|+||.+|+.+|.+++++++.|+++++||| +|.|++||+|+|++++... ........+.
T Consensus 6 ~~~~~Va~itlnrp~~~~Nal~~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g~~FcaG~Dl~~~~~~---~~~~~~~~~~ 82 (699)
T TIGR02440 6 VREDGIAILTIDVPGEKMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLAAC---QTAGEAKALA 82 (699)
T ss_pred EcCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCceeeccCchhhhcc---CChhHHHHHH
Confidence 45689999999999 68999999999999999999999999999986 6788999999999987431 1122233444
Q ss_pred HHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCc--eEEecccccccccCCCcHHHHHhhcChHH-HHHH
Q 018384 117 RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL 193 (357)
Q Consensus 117 ~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l 193 (357)
...+.++..+.++||||||+|||+|+|||++|+++||+||++++ ++|++||+++|++|++|++++|++++|.. +++|
T Consensus 83 ~~~~~~~~~l~~~~kPvIAaVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~~A~~l 162 (699)
T TIGR02440 83 QQGQVLFAELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDM 162 (699)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHHHHHHH
Confidence 55677888999999999999999999999999999999999986 79999999999999999999999999999 9999
Q ss_pred HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhh--cCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCC
Q 018384 194 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLV--TDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (357)
Q Consensus 194 ~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
+++|+.++|+||+++||||+++|++++.+.+..+++.. ...|.... ..+... +...
T Consensus 163 lltG~~~~a~eA~~~GLV~~vv~~~~l~~~a~~~A~~~~~~~~~~~~~---~~~~~~-------------------~~~a 220 (699)
T TIGR02440 163 ILTGKQLRAKQALKLGLVDDVVPQSILLDTAVEMALKGKPIRKPLSLQ---ERLLEG-------------------TPLG 220 (699)
T ss_pred HHcCCcCCHHHHHhCCCCcEecChhHHHHHHHHHHHhCCCCCCCccch---hhhccc-------------------Cchh
Confidence 99999999999999999999999988877666554310 00000000 000000 0000
Q ss_pred HHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018384 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 351 (357)
Q Consensus 272 ~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~af 351 (357)
...+.+ ++.+.+.+-......|...+|++++.+...+++++++.|.+.+..++. |+|+++++++|
T Consensus 221 ~~~~~~------------~~~k~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~~~~~~~~~f 285 (699)
T TIGR02440 221 RALLFD------------QAAKKTAKKTQGNYPAAERILDVVRQGLAQGMQKGLDAEARAFGELVM---TPESAALRSIF 285 (699)
T ss_pred HHHHHH------------HHHHHHHHhcccCChhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcC---CHHHHHHHHHH
Confidence 011111 111223333455567888899999999999999999999999999998 99999999999
Q ss_pred eccC
Q 018384 352 ILNK 355 (357)
Q Consensus 352 l~~r 355 (357)
+-++
T Consensus 286 ~~~~ 289 (699)
T TIGR02440 286 FATT 289 (699)
T ss_pred HHHH
Confidence 8654
No 82
>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=1.6e-45 Score=316.80 Aligned_cols=255 Identities=21% Similarity=0.307 Sum_probs=221.9
Q ss_pred CCceEEEE---eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhc---c
Q 018384 33 CNQVLVEG---KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN---Q 106 (357)
Q Consensus 33 ~~~i~~~~---~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~---~ 106 (357)
+..+.+.+ +..|..+.||||.|.|++|..|+.|+.++++.+..||++++|||+|+|++||+|+|+..+..... +
T Consensus 18 ~ksl~v~vk~~~~~V~hv~lnRPsk~Nal~~~~w~E~~~cf~~l~~dpdcr~iilsg~GKhFcaGIDl~~~~~~~~~~~~ 97 (292)
T KOG1681|consen 18 YKSLEVSVKSAQPFVYHVQLNRPSKLNALNKVFWREFKECFDSLDRDPDCRAIILSGAGKHFCAGIDLNDMASDRILQPE 97 (292)
T ss_pred cceeeeeecCCCCeEEEEEecCcchhhhhhHHHHHHHHHHHHhhccCCCceEEEEecCCcceecccCcchhhhhhccccc
Confidence 44444543 45699999999999999999999999999999999999999999999999999999876543211 1
Q ss_pred C-----ChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHH
Q 018384 107 G-----KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFY 181 (357)
Q Consensus 107 ~-----~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~ 181 (357)
+ ......++...++..+..|.+||||||++|+|+|+|+|+.|..+||+|+|+++|.|+.-|+.+|+..+.|...+
T Consensus 98 ~dd~aR~g~~lrr~Ik~~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL~R 177 (292)
T KOG1681|consen 98 GDDVARKGRSLRRIIKRYQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTLNR 177 (292)
T ss_pred cchHhhhhHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhccccccceeecceeeecccceeeeeeeeeehhhchhhHhh
Confidence 1 12345566777888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcChHH--HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHH
Q 018384 182 LSHLPGHL--GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHR 259 (357)
Q Consensus 182 l~r~~g~~--a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (357)
||..+|.+ ++++.+|++.++|.||++.|||.+|+|+.+-. ....+
T Consensus 178 lpkvVGn~s~~~elafTar~f~a~EAl~~GLvSrvf~dk~~l-l~~~l-------------------------------- 224 (292)
T KOG1681|consen 178 LPKVVGNQSLARELAFTARKFSADEALDSGLVSRVFPDKEEL-LNGAL-------------------------------- 224 (292)
T ss_pred hhHHhcchHHHHHHHhhhhhcchhhhhhcCcchhhcCCHHHH-HhhhH--------------------------------
Confidence 99999965 99999999999999999999999999864322 11111
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcC
Q 018384 260 IDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRL 339 (357)
Q Consensus 260 ~~~~~~~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~ 339 (357)
.+|..|+..+|.+++.||+.++.+++.+.++.|.+=.......+.
T Consensus 225 ---------------------------------~mA~~Ia~KSpvaVqgTK~~L~ysrehsv~~sLnyvatwNms~L~-- 269 (292)
T KOG1681|consen 225 ---------------------------------PMAELIASKSPVAVQGTKENLLYSREHSVEESLNYVATWNMSMLL-- 269 (292)
T ss_pred ---------------------------------HHHHHhccCCceeeechHHHHHHHhhhhhhhhHHHHHHHHHHHHH--
Confidence 358899999999999999999999999999999988888777776
Q ss_pred CCCChhhhhhheeccCC
Q 018384 340 ISGDFYEVSNFQILNKH 356 (357)
Q Consensus 340 ~s~d~~egi~afl~~r~ 356 (357)
|+|+.+.+.|.++|++
T Consensus 270 -s~Dl~~av~a~m~k~k 285 (292)
T KOG1681|consen 270 -SDDLVKAVMAQMEKLK 285 (292)
T ss_pred -HHHHHHHHHHHhhcCC
Confidence 9999999999998764
No 83
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=100.00 E-value=6.1e-43 Score=361.62 Aligned_cols=288 Identities=16% Similarity=0.212 Sum_probs=221.9
Q ss_pred ceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHH
Q 018384 35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (357)
Q Consensus 35 ~i~~~~-~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (357)
.+.++. +++|++|+||||++.|+||.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++..... .......
T Consensus 7 ~i~~~~~~~gva~Itlnrp~~~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~~~~~ 85 (714)
T TIGR02437 7 TIQVTALEDGIAELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLFA-LPDAELI 85 (714)
T ss_pred eEEEEEccCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccCcCHHHHhhccc-CCHHHHH
Confidence 567774 78999999999999999999999999999999999999999999999999999999998754211 1122233
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHH
Q 018384 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (357)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (357)
.+....+.++.+|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. |++
T Consensus 86 ~~~~~~~~~~~~i~~~pkPvIAai~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~~A~~ 165 (714)
T TIGR02437 86 QWLLFANSIFNKLEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGADNALE 165 (714)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHHHHHH
Confidence 4455567788899999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhh-hcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCC
Q 018384 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKL-VTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (357)
Q Consensus 193 l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
|+++|++++|+||+++||||+++|++++.+.+..+++. ....+. ..... .+...... ...+..++..
T Consensus 166 llltG~~~~A~eA~~~GLvd~vv~~~~l~~~a~~~a~~~~~~~~~-~~~~~-------~~~~~~~~--~~~~~~~~~~-- 233 (714)
T TIGR02437 166 WIASGKENRAEDALKVGAVDAVVTADKLGAAALQLLKDAINGKLD-WKAKR-------QPKLEPLK--LSKIEAMMSF-- 233 (714)
T ss_pred HHHcCCcCCHHHHHHCCCCcEeeChhHHHHHHHHHHHHHhhcCCc-ccccC-------CCCccccc--ccchHHHHHH--
Confidence 99999999999999999999999988887766655322 111000 00000 00000000 0000111000
Q ss_pred HHHHHHHHhcccCCCCCchHHH-HHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018384 272 VEEIIDSLESEASLINDPWCGS-TLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 350 (357)
Q Consensus 272 ~e~i~~~l~~~~~~~~~~~a~~-~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~a 350 (357)
+++.+ ..++-..+-| +...+.+.+..+...+++++++.|.+.|..++. |++.+.++..
T Consensus 234 -----------------~~~~~~~~~~~~~~~p-ap~~~~~~v~~~~~~~~~~gl~~E~~~f~~l~~---s~~a~~l~~~ 292 (714)
T TIGR02437 234 -----------------TTAKGMVAQVAGPHYP-APMTAVKTIEKAARFGRDKALEIEAKGFVKLAK---TSEAKALIGL 292 (714)
T ss_pred -----------------HHHHHHHHHhhcCCCC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence 11112 2223333333 444466788888888999999999999999998 9999999999
Q ss_pred eeccCC
Q 018384 351 QILNKH 356 (357)
Q Consensus 351 fl~~r~ 356 (357)
|+.+|.
T Consensus 293 ff~~r~ 298 (714)
T TIGR02437 293 FLNDQY 298 (714)
T ss_pred HhhhHh
Confidence 998764
No 84
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=100.00 E-value=1.6e-42 Score=359.30 Aligned_cols=299 Identities=16% Similarity=0.153 Sum_probs=216.4
Q ss_pred CCceEEEEeCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEE-EEecCCCccccccChHHHHHhhccCChH
Q 018384 33 CNQVLVEGKANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFV-SMKGSGRAFCAGGDIVSLYHFMNQGKLE 110 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~v-vl~g~g~~F~~G~Dl~~~~~~~~~~~~~ 110 (357)
++.+.++++++|++||||||+ +.|+||.+|+.+|.+++++++.|+++++| |+||.|++||+|+|++++... ....
T Consensus 12 ~~~~~~~~~~gVa~itlnrP~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVvltg~g~~F~aG~Dl~~~~~~---~~~~ 88 (737)
T TIGR02441 12 RTHRHYEVKGDVAVVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMIAAC---KTAQ 88 (737)
T ss_pred CCeEEEEEECCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHhhCCCCEEEEEEECCCCcceeCcCHHHHhcc---CChH
Confidence 356888999999999999998 58999999999999999999999999965 679999999999999988531 1223
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCc--eEEecccccccccCCCcHHHHHhhcChH
Q 018384 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGH 188 (357)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~~Gl~p~~g~~~~l~r~~g~ 188 (357)
....+....+.++.++.++||||||+|||+|+|||++|+++||+||++++ ++|++||+++|++|++|++++|+|++|.
T Consensus 89 ~~~~~~~~~~~l~~~i~~~~kPvIAav~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Ggt~rLprliG~ 168 (737)
T TIGR02441 89 EVTQLSQEGQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGV 168 (737)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccHhhhHHHhhCH
Confidence 33445556677889999999999999999999999999999999999987 5899999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCC--CC---hhHH-HHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHH
Q 018384 189 L-GEFLALTGAKLNGAEMMACGLATHYSVS--EK---LPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID 261 (357)
Q Consensus 189 ~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~--~~---l~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (357)
. |++|+++|++++|+||+++||||+|+|+ ++ +++. .+.+.+.+......+...+...+........ ...
T Consensus 169 ~~A~~l~ltG~~i~a~eA~~~GLVd~vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~l~~~~~~~~~~~~~~~~-~~~--- 244 (737)
T TIGR02441 169 PAALDMMLTGKKIRADRAKKMGIVDQLVDPLGPGLKPAEENTIEYLEEVAVKFAQGLANGKLSINRDKGLVHK-ITQ--- 244 (737)
T ss_pred HHHHHHHHcCCcCCHHHHHHCCCCeEecCCcccccccchhhhHHHHHHHHHHHHHHhhcccCCccccccccCc-cch---
Confidence 8 9999999999999999999999999986 22 2111 1111111111111111111001100000000 000
Q ss_pred HHHHHcCC-CCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCC
Q 018384 262 IVDKCFGL-DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLI 340 (357)
Q Consensus 262 ~~~~~~~~-~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~ 340 (357)
...+. .....+++... +.+.+-.+....+...+.+.+..+...+++++++.|.+.|..++.
T Consensus 245 ---~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~~Ap~~~l~~v~~~~~~~~~~gl~~E~~~f~~l~~--- 306 (737)
T TIGR02441 245 ---YVMTNPFVRQQVYKTAE------------DKVMKQTKGLYPAPLKILDVVRTGYDQGPDAGYEAESKAFGELSM--- 306 (737)
T ss_pred ---hhcccchhHHHHHHHHH------------HHHHHhccCCCccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---
Confidence 00000 00111111111 112222333244555577888888888999999999999999998
Q ss_pred CCChhhhhhheeccCC
Q 018384 341 SGDFYEVSNFQILNKH 356 (357)
Q Consensus 341 s~d~~egi~afl~~r~ 356 (357)
|+..+.-+..|+-+|.
T Consensus 307 s~~a~al~~~f~~~~~ 322 (737)
T TIGR02441 307 TFESKALIGLFHGQTD 322 (737)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999876653
No 85
>PLN02267 enoyl-CoA hydratase/isomerase family protein
Probab=100.00 E-value=1.7e-42 Score=315.51 Aligned_cols=185 Identities=16% Similarity=0.150 Sum_probs=157.3
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCce-EEEEecCCCccccccChHHHHHhhccCChHHHHH
Q 018384 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIG-FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD 114 (357)
Q Consensus 36 i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~-~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~ 114 (357)
+.++++++|++|+||||++ |+||.+|+.+|.+++++++.|++++ +||++|.|++||+|+|++++... .........
T Consensus 2 ~~~~~~~~v~~i~Lnrp~~-Nal~~~~~~eL~~al~~~~~d~~~~~vVV~~g~g~~FsaG~Dl~~~~~~--~~~~~~~~~ 78 (239)
T PLN02267 2 CTLEKRGNLFILTLTGDGE-HRLNPTLIDSIRSALRQVKSQATPGSVLITTAEGKFFSNGFDLAWAQAA--GSAPSRLHL 78 (239)
T ss_pred ceeEecCCEEEEEeCCCCc-CcCCHHHHHHHHHHHHHHHhCCCCceEEEEcCCCCceeCCcCHHHHhcc--ccCHHHHHH
Confidence 5678899999999999985 9999999999999999999998865 88889999999999999986421 111222233
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEe-CceEEecccccccccCCCcHHHHHhhcChHH-H-H
Q 018384 115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPDAGASFYLSHLPGHL-G-E 191 (357)
Q Consensus 115 ~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~-~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a-~ 191 (357)
+...+..++.++.++||||||+|||+|+|||++|+++||+||++ ++++|++||+++|++|+++++.++++++|.. + +
T Consensus 79 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~~~~~l~~~vG~~~a~~ 158 (239)
T PLN02267 79 MVAKLRPLVADLISLPMPTIAAVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGSPAARR 158 (239)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChHHHHHHHHHcChHHHHH
Confidence 44556678889999999999999999999999999999999998 5689999999999974444578899999987 7 6
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCC-CChhHH
Q 018384 192 FLALTGAKLNGAEMMACGLATHYSVS-EKLPLI 223 (357)
Q Consensus 192 ~l~ltG~~i~a~eA~~~GLv~~vv~~-~~l~~~ 223 (357)
+|+++|++++|+||+++|||++++|+ +++.+.
T Consensus 159 ~llltG~~~~a~eA~~~Glv~~vv~~~~~l~~~ 191 (239)
T PLN02267 159 DVLLRAAKLTAEEAVEMGIVDSAHDSAEETVEA 191 (239)
T ss_pred HHHHcCCcCCHHHHHHCCCcceecCCHHHHHHH
Confidence 89999999999999999999999985 466543
No 86
>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-42 Score=305.80 Aligned_cols=254 Identities=22% Similarity=0.285 Sum_probs=228.2
Q ss_pred CCceEEEEeCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHH
Q 018384 33 CNQVLVEGKANSRMAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln-~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (357)
+..+.++++|++.+|.+| ||++.|+++.+++.++..+|..+..|+++..++++|.|++||+|.|+..+.....++..+.
T Consensus 6 ~~~~vv~~~~g~~~I~~~~~Pkk~Nal~~e~y~~i~~al~~a~~dds~~~tv~s~~G~~f~sG~Df~~~~~~~~~d~~~~ 85 (266)
T KOG0016|consen 6 YREIVVTRENGPFFIALNIRPKKKNALNREDYVYIQRALEEANDDDSVSITVLSSNGSYFCSGLDFSPFAKALDDDANEE 85 (266)
T ss_pred ccceEEEecCCcEEEEecCCCcccccccHHHHHHHHHHHHHhhcccceEEEEEecCccEEeeccccchhhhcCCCccccc
Confidence 567889999999999999 9999999999999999999999999999999999999999999999998876543332222
Q ss_pred H---HHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChH
Q 018384 112 C---KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188 (357)
Q Consensus 112 ~---~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~ 188 (357)
. .++...+...+..+..+|||+||.|||+++|.|..+...||+++|.|+++|..|+.++|..|++|+++.+|+++|.
T Consensus 86 ~~~~~~~v~~~~~~v~~fi~f~Kplia~vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p~imG~ 165 (266)
T KOG0016|consen 86 SDKASKFVKNVSCFVNTFINFPKPLVALVNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLPKIMGS 165 (266)
T ss_pred chhhHHHHHHHHHHHHHHhcCCCCEEEEecCCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeehHhhch
Confidence 2 2333444457788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHc
Q 018384 189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF 267 (357)
Q Consensus 189 ~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (357)
. |.+|++.|++++|+||.+.|||+++++.+.+.+.+.
T Consensus 166 ~~A~E~ll~~~kltA~Ea~~~glVskif~~~tf~~~v~------------------------------------------ 203 (266)
T KOG0016|consen 166 ASANEMLLFGEKLTAQEACEKGLVSKIFPAETFNEEVL------------------------------------------ 203 (266)
T ss_pred hhHHHHHHhCCcccHHHHHhcCchhhhcChHHHHHHHH------------------------------------------
Confidence 9 999999999999999999999999999988764322
Q ss_pred CCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhh
Q 018384 268 GLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEV 347 (357)
Q Consensus 268 ~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~eg 347 (357)
+.++++++.+|.+++..|++++......+..+.+.|.+.....|. ++|+-+.
T Consensus 204 -------------------------~~ikq~s~l~p~sl~~~K~L~rs~~k~~l~~an~~E~~~l~~~W~---s~e~~~~ 255 (266)
T KOG0016|consen 204 -------------------------KKIKQYSKLSPESLLGMKKLLRSNIKEELIKANEEECNVLLKQWV---SAECLAR 255 (266)
T ss_pred -------------------------HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhcc---ChHHHHH
Confidence 237889999999999999999999999999999999999999998 9999999
Q ss_pred hhheeccCC
Q 018384 348 SNFQILNKH 356 (357)
Q Consensus 348 i~afl~~r~ 356 (357)
++.|+.++.
T Consensus 256 ~~~~~~~~~ 264 (266)
T KOG0016|consen 256 FKQYLSKKR 264 (266)
T ss_pred HHHHhcccc
Confidence 999988753
No 87
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=100.00 E-value=9e-40 Score=289.03 Aligned_cols=190 Identities=33% Similarity=0.513 Sum_probs=173.6
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHH
Q 018384 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (357)
Q Consensus 36 i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (357)
+.++++++|++|+||+|++.|++|.+|+.+|.++++.++.|+++++|||||.|+.||+|+|+.++...... ......+
T Consensus 1 i~~~~~~~i~~i~l~~~~~~N~~~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~Fs~G~dl~~~~~~~~~--~~~~~~~ 78 (195)
T cd06558 1 VLVERDGGVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDA--GEEARAF 78 (195)
T ss_pred CEEEEECCEEEEEECCccccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccccc--chhHHHH
Confidence 46788899999999999989999999999999999999999999999999999999999999998654211 1135567
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHHHH
Q 018384 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 194 (357)
Q Consensus 116 ~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ 194 (357)
...++.++..+..+||||||++||+|+|+|+.++++||+||++++++|++||+++|++|++|++++|++++|.. +.+++
T Consensus 79 ~~~~~~~~~~i~~~~~p~Ia~v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~~~a~~~~ 158 (195)
T cd06558 79 IRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELL 158 (195)
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCHHHHHHHH
Confidence 78888999999999999999999999999999999999999999999999999999999999999999999988 99999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHH
Q 018384 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 227 (357)
Q Consensus 195 ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l 227 (357)
++|++++++||+++|||+++++.+++.+.+..+
T Consensus 159 l~g~~~~a~ea~~~Glv~~~~~~~~l~~~a~~~ 191 (195)
T cd06558 159 LTGRRISAEEALELGLVDEVVPDEELLAAALEL 191 (195)
T ss_pred HcCCccCHHHHHHcCCCCeecChhHHHHHHHHH
Confidence 999999999999999999999988876655444
No 88
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
Probab=100.00 E-value=5.1e-41 Score=286.97 Aligned_cols=252 Identities=19% Similarity=0.275 Sum_probs=202.6
Q ss_pred CCCceEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecC--C-CccccccChHHHHHhhccC
Q 018384 32 LCNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS--G-RAFCAGGDIVSLYHFMNQG 107 (357)
Q Consensus 32 ~~~~i~~~~~-~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~--g-~~F~~G~Dl~~~~~~~~~~ 107 (357)
.++.|++++. ++|+.|+||||+.+|++.+....||.++|..+..|++|.+|||||. | ++||+|+|-+.-.....-.
T Consensus 16 ~y~dI~Y~~~~~giakItinRPevrNAfrP~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~gY~ 95 (282)
T COG0447 16 GYEDITYEKSVDGIAKITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGYV 95 (282)
T ss_pred CcceeEEeeccCceEEEEecChhhhccCCCccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCCcc
Confidence 4677899988 9999999999999999999999999999999999999999999985 5 7999999976533210000
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcCh
Q 018384 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 187 (357)
Q Consensus 108 ~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g 187 (357)
+.+....+ ..-.+-+.|..+||||||.|+|+++|||-.|-+.||+.||+++|+|+....++|-+-++.++..|.|++|
T Consensus 96 ~d~~~~rL--nvLdlQrlIR~~PKpViA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~VG 173 (282)
T COG0447 96 DDDGIPRL--NVLDLQRLIRTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIVG 173 (282)
T ss_pred CCccCccc--chhhHHHHHHhCCcceEEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHHhh
Confidence 01111111 1234556788999999999999999999999999999999999999999999999988778888999999
Q ss_pred HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHH
Q 018384 188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 266 (357)
Q Consensus 188 ~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (357)
.. |+++.+.++.++|+||+++|+||.|||-++|++...
T Consensus 174 qKkArEIwfLcR~Y~A~eal~MGlVN~Vvp~~~LE~e~v----------------------------------------- 212 (282)
T COG0447 174 QKKAREIWFLCRQYDAEEALDMGLVNTVVPHADLEKETV----------------------------------------- 212 (282)
T ss_pred hhhhHHhhhhhhhccHHHHHhcCceeeeccHHHHHHHHH-----------------------------------------
Confidence 99 999999999999999999999999999999875332
Q ss_pred cCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhh
Q 018384 267 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 346 (357)
Q Consensus 267 ~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~e 346 (357)
+| ++.|.++||.+++..|..+|..-+ ++. ++. |+..-..++. -.+++.+|
T Consensus 213 ----------------------~W----~~E~l~kSP~AlR~LK~Afnad~D-Gla-G~q-~~ag~at~L~-YmTdEa~E 262 (282)
T COG0447 213 ----------------------QW----AREMLAKSPTALRMLKAAFNADCD-GLA-GLQ-ELAGNATLLY-YMTDEAQE 262 (282)
T ss_pred ----------------------HH----HHHHHhcChHHHHHHHHHhcCCCc-hhh-HHH-HhcccceEEE-Eechhhhh
Confidence 33 788899999999999999885432 221 111 2211111110 12899999
Q ss_pred hhhheeccCC
Q 018384 347 VSNFQILNKH 356 (357)
Q Consensus 347 gi~afl~~r~ 356 (357)
|-.||++||+
T Consensus 263 Gr~AF~eKR~ 272 (282)
T COG0447 263 GRDAFLEKRK 272 (282)
T ss_pred hHHHHhhccC
Confidence 9999999996
No 89
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=1.6e-39 Score=323.86 Aligned_cols=198 Identities=14% Similarity=0.157 Sum_probs=166.9
Q ss_pred cccCCCceEEEEeCCEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHHH-cCCCceEEEEecC-CCccccccC
Q 018384 29 TDDLCNQVLVEGKANSRMAILNRPS----------ALNALNTNMGAKLNKLFKAWE-NDPNIGFVSMKGS-GRAFCAGGD 96 (357)
Q Consensus 29 ~~~~~~~i~~~~~~~v~~I~ln~p~----------~~Nal~~~~~~~L~~~l~~~~-~d~~v~~vvl~g~-g~~F~~G~D 96 (357)
.|+.++++.++++++|++||||||+ +.|++|.+|+.+|.+++++++ .|+++++|||||. |++||+|+|
T Consensus 6 ~~~~~~~v~~~~~g~Va~ItLnrpe~~~~~p~~~~k~Nal~~~~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~D 85 (546)
T TIGR03222 6 EPSQYRHWKLTFDGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGAN 85 (546)
T ss_pred CCCCCceEEEEeeCCEEEEEEecccccccCccccccCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCcC
Confidence 3445678999999999999999975 899999999999999999999 7899999999997 589999999
Q ss_pred hHHHHHhhccCChHHHHHHH-HHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCc--eEEeccccc-ccc
Q 018384 97 IVSLYHFMNQGKLEECKDFF-RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IGF 172 (357)
Q Consensus 97 l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~-~Gl 172 (357)
++++...... .......+. .....+...+.++||||||+|||+|+|||++|+++||+||++++ ++|++||++ +|+
T Consensus 86 L~~~~~~~~~-~~~~~~~~~~~~~~~i~~~i~~~pkPvIAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl 164 (546)
T TIGR03222 86 IFMLGLSTHA-WKVNFCKFTNETRNGIEDSSRHSGLKFLAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGV 164 (546)
T ss_pred HHHHhccccc-hhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCc
Confidence 9987431110 011111111 11233555677899999999999999999999999999999986 799999997 999
Q ss_pred cCCCcHHHHHh--hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHH
Q 018384 173 HPDAGASFYLS--HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 227 (357)
Q Consensus 173 ~p~~g~~~~l~--r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l 227 (357)
+|++|+..+++ +++|.. |++|+++|++++|+||+++|||+++||++++.+.+.++
T Consensus 165 ~P~~gg~~~l~~~~~vg~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~l 222 (546)
T TIGR03222 165 LPGTGGLTRVTDKRRVRRDHADIFCTIEEGVRGKRAKEWRLVDEVVKPSQFDAAIAER 222 (546)
T ss_pred CCccchhhhccccchhCHHHHHHHHHcCCCccHHHHHHcCCceEEeChHHHHHHHHHH
Confidence 99999998887 689998 99999999999999999999999999998887665555
No 90
>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=1.8e-38 Score=268.93 Aligned_cols=249 Identities=19% Similarity=0.215 Sum_probs=215.0
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHH
Q 018384 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (357)
Q Consensus 34 ~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (357)
....++.+++|..|+||+|++.|.|+.+|+.+|.+.|....++.++|+|||+..|+.||+|.||+++.+. ...+...
T Consensus 32 ~~g~~~~~~gvR~i~l~npKk~NtLSLaM~~~Lq~~ll~d~d~~dlr~viita~GkifSaGH~LKELt~e---~g~d~ha 108 (287)
T KOG1682|consen 32 DLGLVKEHNGVREITLNNPKKLNTLSLAMMCALQDALLKDKDNLDLRCVIITAQGKIFSAGHNLKELTNE---PGSDIHA 108 (287)
T ss_pred cccccccccceeeeeecCccccchhhHHHHHHHHHHHhhcccccceeEEEEecCCccccccccHHHhhcC---ccchHHH
Confidence 4456677899999999999999999999999999999998888899999999999999999999998752 3344556
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHH
Q 018384 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (357)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (357)
..+....+++.-|.++|+|||+-|||.+..+|+.|..+||++||+++++|..|...+|++...-+. .|.|.++.. +.+
T Consensus 109 evFqtc~dvmn~Irn~pVPVia~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPGv-AlaRavpRkva~~ 187 (287)
T KOG1682|consen 109 EVFQTCTDVMNDIRNLPVPVIAKVNGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPGV-ALARAVPRKVAAY 187 (287)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEecchhhhccceEEEeeeEEEEecCccccCCCCceeeEecCcch-hHhhhcchhHHHH
Confidence 677778889999999999999999999999999999999999999999999999999997554333 378889988 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHcCCCCH
Q 018384 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (357)
Q Consensus 193 l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (357)
|++||.+|+++||+..|||+++||+++++...+.
T Consensus 188 ML~Tg~Pi~~eeAl~sGlvskvVp~~el~~e~~~---------------------------------------------- 221 (287)
T KOG1682|consen 188 MLMTGLPITGEEALISGLVSKVVPAEELDKEIEE---------------------------------------------- 221 (287)
T ss_pred HHHhCCCCchHHHHHhhhhhhcCCHHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999998743332
Q ss_pred HHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018384 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 352 (357)
Q Consensus 273 e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~afl 352 (357)
+...|-..|...+.+-|+.+......+..+++....+....-++ -.|.+|||.+|+
T Consensus 222 ---------------------i~~~i~~~srav~slgk~f~y~q~~ms~~ea~~~~~~~m~~n~q---l~d~kegiasf~ 277 (287)
T KOG1682|consen 222 ---------------------ITNAIKAKSRAVISLGKEFYYKQLAMSQAEAFSAAQEKMCENFQ---LGDTKEGIASFF 277 (287)
T ss_pred ---------------------HHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhccc---ccchHHHHHHHh
Confidence 36677777788888899999888777777777766666555554 899999999999
Q ss_pred ccCC
Q 018384 353 LNKH 356 (357)
Q Consensus 353 ~~r~ 356 (357)
+||-
T Consensus 278 ~krp 281 (287)
T KOG1682|consen 278 EKRP 281 (287)
T ss_pred ccCC
Confidence 9983
No 91
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=2.9e-38 Score=315.80 Aligned_cols=196 Identities=14% Similarity=0.168 Sum_probs=164.5
Q ss_pred cCCCceEEEEeCCEEEEEEcCC-------C---CCCCCCHHHHHHHHHHHHHHH-cCCCceEEEEecCC-CccccccChH
Q 018384 31 DLCNQVLVEGKANSRMAILNRP-------S---ALNALNTNMGAKLNKLFKAWE-NDPNIGFVSMKGSG-RAFCAGGDIV 98 (357)
Q Consensus 31 ~~~~~i~~~~~~~v~~I~ln~p-------~---~~Nal~~~~~~~L~~~l~~~~-~d~~v~~vvl~g~g-~~F~~G~Dl~ 98 (357)
..++.+.++++++|++|||||| + +.|+||.+|+.+|.+++++++ .|+++++|||||.+ ++||+|+|++
T Consensus 12 ~~~~~~~~e~~~~Va~ItLnrpe~~~~rP~~~~~~Nal~~~m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~DL~ 91 (550)
T PRK08184 12 SQYRHWKLSFDGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGANIF 91 (550)
T ss_pred CCCceEEEEeeCCEEEEEEcCccccccCcccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCccCHH
Confidence 3467799999999999999965 3 899999999999999999999 78999999999985 8999999999
Q ss_pred HHHHhhccCChHHHHHHHHH-HHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCc--eEEeccccc-ccccC
Q 018384 99 SLYHFMNQGKLEECKDFFRT-LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IGFHP 174 (357)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~-~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~-~Gl~p 174 (357)
.+...... .......+... ...+...+.++||||||+|||+|+|||++|+++|||||++++ ++|++||++ +|++|
T Consensus 92 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~pkPvIAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P 170 (550)
T PRK08184 92 MLGGSSHA-WKVNFCKFTNETRNGIEDSSRHSGLKFIAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLP 170 (550)
T ss_pred hHhccccc-hhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCC
Confidence 87432110 00111111111 122445677899999999999999999999999999999987 899999997 99999
Q ss_pred CCcHHHHHh--hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHH
Q 018384 175 DAGASFYLS--HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 227 (357)
Q Consensus 175 ~~g~~~~l~--r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l 227 (357)
++|++++++ +++|.. +.+|++||+.++|+||+++|||++++|++++.+.+.++
T Consensus 171 ~~gg~~rl~~~~~vg~~~A~~llltG~~i~AeeA~~~GLVd~vv~~d~l~~~a~~~ 226 (550)
T PRK08184 171 GTGGLTRVTDKRKVRRDLADIFCTIEEGVRGKRAVDWRLVDEVVKPSKFDAKVAER 226 (550)
T ss_pred CcchHHHhhhhhhcCHHHHHHHHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHH
Confidence 999999998 779998 99999999999999999999999999998887655544
No 92
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=99.82 E-value=4.6e-20 Score=160.69 Aligned_cols=141 Identities=16% Similarity=0.105 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q 018384 61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (357)
Q Consensus 61 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~ 140 (357)
-.+.+|.++++++..|+++++|||++ +|.|+|+.... .+..++..+..++|||||+++|.
T Consensus 22 ~~~~~l~~~l~~a~~d~~v~~vvl~~----~~~gg~~~~~~----------------~~~~~i~~~~~~~kpVia~v~G~ 81 (177)
T cd07014 22 VSGDTTAAQIRDARLDPKVKAIVLRV----NSPGGSVTASE----------------VIRAELAAARAAGKPVVASGGGN 81 (177)
T ss_pred cCHHHHHHHHHHHhcCCCceEEEEEe----eCCCcCHHHHH----------------HHHHHHHHHHhCCCCEEEEECCc
Confidence 35789999999999999999999997 68898876421 22345666778999999999999
Q ss_pred eechhhhhhccCCeEEEeCceEEecccccccccCCCcHHH--------HHhhcCh--HH-HHHHHhcCCCCCHHHHHHcC
Q 018384 141 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASF--------YLSHLPG--HL-GEFLALTGAKLNGAEMMACG 209 (357)
Q Consensus 141 a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~--------~l~r~~g--~~-a~~l~ltG~~i~a~eA~~~G 209 (357)
|.|+|+.|+++||+++++++++|+.+.+..+..+...... .+++..| .. ..+++..|..++|++|++.|
T Consensus 82 a~g~g~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~~~~~~l~~g~~~~a~~A~~~G 161 (177)
T cd07014 82 AASGGYWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPEQQIDKIAQGGVWTGQDAKANG 161 (177)
T ss_pred hhHHHHHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhHHHhcCcCeEeHHHHHHcC
Confidence 9999999999999999999999999987766433222222 3444445 55 78888999999999999999
Q ss_pred ccceecCCCChh
Q 018384 210 LATHYSVSEKLP 221 (357)
Q Consensus 210 Lv~~vv~~~~l~ 221 (357)
|||++.+.+++.
T Consensus 162 LVD~v~~~~e~~ 173 (177)
T cd07014 162 LVDSLGSFDDAV 173 (177)
T ss_pred CcccCCCHHHHH
Confidence 999999866653
No 93
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=99.80 E-value=3.3e-19 Score=156.49 Aligned_cols=148 Identities=13% Similarity=0.080 Sum_probs=116.2
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHH
Q 018384 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 124 (357)
Q Consensus 45 ~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 124 (357)
++|.++. .++..+...+.+.|+.+..|+ ++.|+|.=. |.|+++..- ..++.
T Consensus 2 ~vv~i~g-----~I~~~~~~~l~~~l~~a~~~~-~~~vvl~In----SpGG~v~~~-------------------~~i~~ 52 (187)
T cd07020 2 YVLEING-----AITPATADYLERAIDQAEEGG-ADALIIELD----TPGGLLDST-------------------REIVQ 52 (187)
T ss_pred EEEEEee-----EEChHHHHHHHHHHHHHHhCC-CCEEEEEEE----CCCCCHHHH-------------------HHHHH
Confidence 5666653 366777889999999998765 777777622 445554321 12445
Q ss_pred HHhcCCCcEEEEEc---cceechhhhhhccCCeEEEeCceEEecccccccccCCC--------------cHHHHHhhcCh
Q 018384 125 LLGTHLKPHVAILN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDA--------------GASFYLSHLPG 187 (357)
Q Consensus 125 ~i~~~~kPvIa~v~---G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~--------------g~~~~l~r~~g 187 (357)
.+..+||||||+|+ |+|.|||+.|+++||++|++++++|+.+++..+..+.. +....+++..|
T Consensus 53 ~l~~~~kPvia~v~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G 132 (187)
T cd07020 53 AILASPVPVVVYVYPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLAELRG 132 (187)
T ss_pred HHHhCCCCEEEEEecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 56789999999999 99999999999999999999999999999985544432 23456788888
Q ss_pred H--H-HHHHHhcCCCCCHHHHHHcCccceecCCC-Chh
Q 018384 188 H--L-GEFLALTGAKLNGAEMMACGLATHYSVSE-KLP 221 (357)
Q Consensus 188 ~--~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~-~l~ 221 (357)
. . +.+++++|+.++++||+++||||++++++ ++.
T Consensus 133 ~~~~~a~~~l~~g~~~~a~eA~~~Glvd~v~~~~~~~~ 170 (187)
T cd07020 133 RNAEWAEKAVRESLSLTAEEALKLGVIDLIAADLNELL 170 (187)
T ss_pred CCHHHHHHHHHcCCeecHHHHHHcCCcccccCCHHHHH
Confidence 6 5 88999999999999999999999999875 443
No 94
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=99.66 E-value=2.7e-16 Score=140.65 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=81.5
Q ss_pred CEEEEEEcCC--CCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHH
Q 018384 43 NSRMAILNRP--SALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY 120 (357)
Q Consensus 43 ~v~~I~ln~p--~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~ 120 (357)
+|++|.++-| +..+..+.-++.+|.++|+.+..||++++|||+ .||.|+|+..+.. +.
T Consensus 1 ~i~v~~~~g~i~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~----~~s~Gg~~~~~~~----------------~~ 60 (211)
T cd07019 1 SIGVVFANGAIVDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLR----VNSPGGSVTASEV----------------IR 60 (211)
T ss_pred CEEEEEEEEEEeCCCCCCCccCHHHHHHHHHHHhhCCCceEEEEE----EcCCCcCHHHHHH----------------HH
Confidence 3555555533 122333455689999999999999999999998 6999999876421 12
Q ss_pred HHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEec
Q 018384 121 SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 165 (357)
Q Consensus 121 ~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~ 165 (357)
..+..+..++|||||+++|.|.|+|+.|+++||++++++++.|+.
T Consensus 61 ~~l~~~~~~~kpVia~v~g~a~s~gy~la~~aD~i~a~~~a~~gs 105 (211)
T cd07019 61 AELAAARAAGKPVVVSAGGAAASGGYWISTPANYIVANPSTLTGS 105 (211)
T ss_pred HHHHHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEcCCCEEEE
Confidence 345667788999999999999999999999999999999988863
No 95
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=99.56 E-value=3e-14 Score=122.03 Aligned_cols=134 Identities=14% Similarity=0.130 Sum_probs=103.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018384 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (357)
Q Consensus 58 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v 137 (357)
++..++.+|.+.|+.++.|+++++|+|.. .|.|+|+... ..+...+..++||||+.+
T Consensus 8 I~~~~~~~l~~~l~~a~~d~~~~~ivl~~----~s~Gg~~~~~-------------------~~i~~~l~~~~kpvva~~ 64 (161)
T cd00394 8 IEDVSADQLAAQIRFAEADNSVKAIVLEV----NTPGGRVDAG-------------------MNIVDALQASRKPVIAYV 64 (161)
T ss_pred EccchHHHHHHHHHHHHhCCCCceEEEEE----ECCCcCHHHH-------------------HHHHHHHHHhCCCEEEEE
Confidence 55688999999999999999999999986 4777776432 123445667889999999
Q ss_pred ccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHH------HH----Hhh---------cChHH-HHHHHhcC
Q 018384 138 NGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGAS------FY----LSH---------LPGHL-GEFLALTG 197 (357)
Q Consensus 138 ~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~------~~----l~r---------~~g~~-a~~l~ltG 197 (357)
+|.|.++|+.|+++||.|++.+++.|++..+..+.....+-. .. ..+ ..... ..+++..|
T Consensus 65 ~g~~~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~r~~~~~~~~~~~~~~ 144 (161)
T cd00394 65 GGQAASAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAENRGQTTEKLEEDIEKD 144 (161)
T ss_pred CChhHHHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHhcCC
Confidence 999999999999999999999999999998876654322000 01 111 12223 46677889
Q ss_pred CCCCHHHHHHcCcccee
Q 018384 198 AKLNGAEMMACGLATHY 214 (357)
Q Consensus 198 ~~i~a~eA~~~GLv~~v 214 (357)
..++++||++.||||++
T Consensus 145 ~~~~a~eA~~~GLvD~i 161 (161)
T cd00394 145 LVLTAQEALEYGLVDAL 161 (161)
T ss_pred cEEcHHHHHHcCCcCcC
Confidence 99999999999999985
No 96
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=99.55 E-value=5e-14 Score=126.32 Aligned_cols=96 Identities=19% Similarity=0.154 Sum_probs=74.1
Q ss_pred cCCCCCCC-CCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhc
Q 018384 50 NRPSALNA-LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGT 128 (357)
Q Consensus 50 n~p~~~Na-l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 128 (357)
++|...|+ ++..++.+|.++|+.++.|+++++|||+. +|.|+++... ..+...+..+..
T Consensus 13 ~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~i~~Vvl~~----~s~gg~~~~~----------------~~l~~~l~~~~~ 72 (214)
T cd07022 13 PRGSWLEASSGLTSYEGIAAAIRAALADPDVRAIVLDI----DSPGGEVAGV----------------FELADAIRAARA 72 (214)
T ss_pred CCCCcccCCCCcccHHHHHHHHHHHhhCCCCcEEEEEE----eCCCCcHHHH----------------HHHHHHHHHHhc
Confidence 34444454 45789999999999999999999999975 5667665432 112223333334
Q ss_pred CCCcEEEEEccceechhhhhhccCCeEEEeCceEEecc
Q 018384 129 HLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 166 (357)
Q Consensus 129 ~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~p 166 (357)
+|||||+++|.|.|+|+.|+++||++++++++.|+..
T Consensus 73 -~KpViA~v~g~a~s~gy~lA~~aD~i~a~~~a~~g~i 109 (214)
T cd07022 73 -GKPIVAFVNGLAASAAYWIASAADRIVVTPTAGVGSI 109 (214)
T ss_pred -CCCEEEEECCchhhHHHHHHhcCCEEEEcCCCeEEee
Confidence 6999999999999999999999999999999987654
No 97
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A.
Probab=99.54 E-value=1.5e-14 Score=117.05 Aligned_cols=91 Identities=40% Similarity=0.717 Sum_probs=82.1
Q ss_pred HHHHHHHHcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhc
Q 018384 259 RIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSR 338 (357)
Q Consensus 259 ~~~~~~~~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~ 338 (357)
....|++||+.+++++|++.|+. ...+|+.++++.|.++||+|+++|.++++++...+++++++.|+++..+++.
T Consensus 5 ~~~~I~~~F~~~s~~eI~~~L~~----~~~~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~~~sl~e~l~~E~~~a~~~~~- 79 (118)
T PF13766_consen 5 HLEAIDRCFSADSVEEIIEALEA----DGDEWAQKTLETLRSGSPLSLKVTFEQLRRGRNLSLAECLRMEYRLASRCMR- 79 (118)
T ss_dssp CHHHHHHHTTSSSHHHHHHHHHH----HS-HHHHHHHHHHCCS-HHHHHHHHHHHHCCTTS-HHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhCCCCHHHHHHHHHc----cCcHHHHHHHHHHHHCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc-
Confidence 45689999999999999999998 3679999999999999999999999999999999999999999999999998
Q ss_pred CCCCChhhhhhheeccCC
Q 018384 339 LISGDFYEVSNFQILNKH 356 (357)
Q Consensus 339 ~~s~d~~egi~afl~~r~ 356 (357)
.+||.|||||.|+||+
T Consensus 80 --~~DF~EGVRA~LIDKd 95 (118)
T PF13766_consen 80 --HPDFAEGVRALLIDKD 95 (118)
T ss_dssp --CSCHHHHHHHHTTS--
T ss_pred --cchHHHHHHHHHhcCC
Confidence 8999999999999985
No 98
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=99.50 E-value=1.2e-13 Score=123.28 Aligned_cols=153 Identities=18% Similarity=0.136 Sum_probs=107.2
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHH
Q 018384 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (357)
Q Consensus 44 v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (357)
|++|.++.+=... .+.++.+|.++|+.+..|+++++|+|++ +|.|+|+.... .+...+
T Consensus 2 v~vi~i~g~i~~~--~~~~~~~l~~~l~~a~~d~~i~~ivl~~----~s~Gg~~~~~~----------------~i~~~i 59 (208)
T cd07023 2 IAVIDIEGTISDG--GGIGADSLIEQLRKAREDDSVKAVVLRI----NSPGGSVVASE----------------EIYREI 59 (208)
T ss_pred EEEEEEEEEEcCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEE----ECCCCCHHHHH----------------HHHHHH
Confidence 5666666432101 3689999999999999999999999998 58898886421 123345
Q ss_pred HHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccc------------cccccCCCc--------------
Q 018384 124 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET------------LIGFHPDAG-------------- 177 (357)
Q Consensus 124 ~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~Gl~p~~g-------------- 177 (357)
..+..++|||||+++|.|.|+|+.|+++||.+++++.+.|+..-+ ++|+-+..-
T Consensus 60 ~~~~~~~kpvia~v~g~~~s~g~~lA~aaD~i~a~~~s~~g~iG~~~~~~~~~~~l~k~Gi~~~~~~~g~~K~~~~~~~~ 139 (208)
T cd07023 60 RRLRKAKKPVVASMGDVAASGGYYIAAAADKIVANPTTITGSIGVIGQGPNLEELLDKLGIERDTIKSGPGKDKGSPDRP 139 (208)
T ss_pred HHHHhcCCcEEEEECCcchhHHHHHHhhCCEEEECCCCeEEeCcEEEecCCHHHHHHhcCCceEEEecCCCccCCCCCCC
Confidence 667778999999999999999999999999999999998764322 123322111
Q ss_pred H----HHHHhhcCh-----------------HHHHHHHhcCCCCCHHHHHHcCccceecCCC
Q 018384 178 A----SFYLSHLPG-----------------HLGEFLALTGAKLNGAEMMACGLATHYSVSE 218 (357)
Q Consensus 178 ~----~~~l~r~~g-----------------~~a~~l~ltG~~i~a~eA~~~GLv~~vv~~~ 218 (357)
. ...+..++. .....-++.|..+++++|++.||||++...+
T Consensus 140 ~s~~~~e~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~~~~~~a~~A~~~gLiD~i~~~~ 201 (208)
T cd07023 140 LTEEERAILQALVDDIYDQFVDVVAEGRGMSGERLDKLADGRVWTGRQALELGLVDELGGLD 201 (208)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHhcCCcEEEHHHHHHcCCCcccCCHH
Confidence 0 011111111 1112235688999999999999999997533
No 99
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=99.50 E-value=1.6e-13 Score=139.69 Aligned_cols=170 Identities=17% Similarity=0.220 Sum_probs=120.2
Q ss_pred EeCCEEEEEEcCCC--CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHH
Q 018384 40 GKANSRMAILNRPS--ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFR 117 (357)
Q Consensus 40 ~~~~v~~I~ln~p~--~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~ 117 (357)
.++.|++|+++.+- ..|..+......+.+.|+.+..|+++++|||+-. |.|++.... +
T Consensus 306 ~~~~vavI~~~G~I~~~~~~~~~~~~~~~~~~l~~a~~D~~VkaIVLrin----SpGGs~~as----------------e 365 (584)
T TIGR00705 306 VQDKIGIVHLEGPIADGRDTEGNTGGDTVAALLRVARSDPDIKAVVLRIN----SPGGSVFAS----------------E 365 (584)
T ss_pred CCCeEEEEEEEEEEcCCCCcccccCHHHHHHHHHHHhhCCCceEEEEEec----CCCCCHHHH----------------H
Confidence 46789999998763 2344444456678889999999999999999965 223322110 1
Q ss_pred HHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEE------eccc------ccccccCCCcHHHHHhh-
Q 018384 118 TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF------ATPE------TLIGFHPDAGASFYLSH- 184 (357)
Q Consensus 118 ~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f------~~pe------~~~Gl~p~~g~~~~l~r- 184 (357)
.+.+.+..+...+||||+.++|.|.+||+.++++||.+++++.+.+ +.+. .++|+.|+...+..+..
T Consensus 366 ~i~~~i~~~~~~gKPVva~~~g~aaSggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~ 445 (584)
T TIGR00705 366 IIRRELARAQARGKPVIVSMGAMAASGGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANV 445 (584)
T ss_pred HHHHHHHHHHhCCCcEEEEECCccccHHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCC
Confidence 1122334455678999999999999999999999999999999876 5553 57898887665543332
Q ss_pred ---------------------------c------ChHHHHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhh
Q 018384 185 ---------------------------L------PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLV 231 (357)
Q Consensus 185 ---------------------------~------~g~~a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~ 231 (357)
. +.....+.+.+|+.++++||+++||||++- .++++.+..++++
T Consensus 446 s~~~~~t~~~~~~~~~~l~~~y~~F~~~Va~~R~l~~e~v~~ia~Grv~tg~eA~~~GLVD~ig---~~~~Ai~~a~~la 522 (584)
T TIGR00705 446 SLLRPLTAEDQAIMQLSVEAGYRRFLSVVSAGRNLTPTQVDKVAQGRVWTGEDAVSNGLVDALG---GLDEAVAKAAKLA 522 (584)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHhCCCcCHHHHHHcCCcccCC---CHHHHHHHHHHHc
Confidence 2 222256678899999999999999999994 4554444444443
Q ss_pred c
Q 018384 232 T 232 (357)
Q Consensus 232 ~ 232 (357)
.
T Consensus 523 ~ 523 (584)
T TIGR00705 523 H 523 (584)
T ss_pred C
Confidence 3
No 100
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a
Probab=99.48 E-value=1.7e-13 Score=117.36 Aligned_cols=128 Identities=15% Similarity=0.168 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q 018384 61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (357)
Q Consensus 61 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~ 140 (357)
.+...+.+.|+.+..+..+ .+.|.+.|+...+| ..++..|..+|+|||+.++|.
T Consensus 15 ~~~~~~~~~l~~~~~~~~i-~l~inspGG~~~~~-------------------------~~i~~~i~~~~~pvi~~v~g~ 68 (160)
T cd07016 15 VTAKEFKDALDALGDDSDI-TVRINSPGGDVFAG-------------------------LAIYNALKRHKGKVTVKIDGL 68 (160)
T ss_pred cCHHHHHHHHHhccCCCCE-EEEEECCCCCHHHH-------------------------HHHHHHHHhcCCCEEEEEcch
Confidence 4667888888888876333 44455544332221 234556777899999999999
Q ss_pred eechhhhhhccCCeEEEeCceEEecccccccccCCCcH---------------HHHHhhcCh--HH-HHHHHhcCCCCCH
Q 018384 141 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA---------------SFYLSHLPG--HL-GEFLALTGAKLNG 202 (357)
Q Consensus 141 a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~---------------~~~l~r~~g--~~-a~~l~ltG~~i~a 202 (357)
|.|+|+.++++||+|++++++.|+++....|..+.... ...+.+..| .. ...++.++..+++
T Consensus 69 a~s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~l~a 148 (160)
T cd07016 69 AASAASVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEKTGLSEEEISALMDAETWLTA 148 (160)
T ss_pred HHhHHHHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCeECcH
Confidence 99999999999999999999999998877665443221 223666677 45 6777777788999
Q ss_pred HHHHHcCcccee
Q 018384 203 AEMMACGLATHY 214 (357)
Q Consensus 203 ~eA~~~GLv~~v 214 (357)
+||+++||||+|
T Consensus 149 ~eA~~~GliD~v 160 (160)
T cd07016 149 QEAVELGFADEI 160 (160)
T ss_pred HHHHHcCCCCcC
Confidence 999999999985
No 101
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=99.41 E-value=2.1e-12 Score=115.16 Aligned_cols=148 Identities=17% Similarity=0.163 Sum_probs=102.1
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHH
Q 018384 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (357)
Q Consensus 44 v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (357)
|++|+++.+=. ....+|.++|+.+..|+++++|||++. |.|+++... ..+.
T Consensus 2 v~vi~i~g~i~------~s~~~l~~~l~~a~~d~~i~~vvl~~~----s~Gg~~~~~-------------------~~l~ 52 (207)
T TIGR00706 2 IAILPVSGAIA------VSPEDFDKKIKRIKDDKSIKALLLRIN----SPGGTVVAS-------------------EEIY 52 (207)
T ss_pred EEEEEEEEEEe------cCHHHHHHHHHHHhhCCCccEEEEEec----CCCCCHHHH-------------------HHHH
Confidence 56666664421 335789999999999999999999984 778776532 1233
Q ss_pred HHHhcCC--CcEEEEEccceechhhhhhccCCeEEEeCceEEeccccc------------ccccCC------------C-
Q 018384 124 YLLGTHL--KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGFHPD------------A- 176 (357)
Q Consensus 124 ~~i~~~~--kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~------------~Gl~p~------------~- 176 (357)
..|..++ |||||+++|.|.|+|+.|+++||.+++++++.|+...+. +|+-+. .
T Consensus 53 ~~i~~~~~~kpvia~v~g~a~s~g~~la~aaD~i~a~p~a~vg~iGv~~~~~~~~~~l~k~Gv~~~~~~~g~~K~~~~~~ 132 (207)
T TIGR00706 53 EKLKKLKAKKPVVASMGGVAASGGYYIAMAADEIVANPGTITGSIGVILQGANVEKLYEKLGIEFEVIKSGEYKDIGSPT 132 (207)
T ss_pred HHHHHhcCCCCEEEEECCccchHHHHHHhcCCEEEECCCCeEEeeeEEEecCCHHHHHHhCCceEEEEEcCCCcCCCCCC
Confidence 3445555 999999999999999999999999999999887653332 233210 0
Q ss_pred -cHH----HHHh-----------------hcChHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 018384 177 -GAS----FYLS-----------------HLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 220 (357)
Q Consensus 177 -g~~----~~l~-----------------r~~g~~a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l 220 (357)
..+ ..+. |-+.....+-++.|+.+++++|++.||||++...+++
T Consensus 133 ~~~s~~~~e~~~~~l~~~~~~f~~~va~~R~~~~~~~~~~~~~~~~~~~~A~~~gLvD~i~~~~~~ 198 (207)
T TIGR00706 133 RELTPEERDILQNLVNESYEQFVQVVAKGRNLPVEDVKKFADGRVFTGRQALKLRLVDKLGTEDDA 198 (207)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCCcccHHHHHHcCCCcccCCHHHH
Confidence 000 0111 2222221223468999999999999999999765554
No 102
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=99.30 E-value=2.4e-11 Score=105.46 Aligned_cols=140 Identities=16% Similarity=0.238 Sum_probs=100.5
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHH
Q 018384 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 124 (357)
Q Consensus 45 ~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 124 (357)
.+|.++. .+++.....|.+.|+++.+++ ++.|+|.=. |.|+++.. ...++.
T Consensus 2 ~vi~i~g-----~I~~~~~~~l~~~l~~a~~~~-~~~ivl~in----spGG~v~~-------------------~~~I~~ 52 (178)
T cd07021 2 YVIPIEG-----EIDPGLAAFVERALKEAKEEG-ADAVVLDID----TPGGRVDS-------------------ALEIVD 52 (178)
T ss_pred EEEEEee-----EECHHHHHHHHHHHHHHHhCC-CCeEEEEEE----CcCCCHHH-------------------HHHHHH
Confidence 4566653 366778888999999999886 667766543 44554432 123556
Q ss_pred HHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcH--------HHH------HhhcChH--
Q 018384 125 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA--------SFY------LSHLPGH-- 188 (357)
Q Consensus 125 ~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~--------~~~------l~r~~g~-- 188 (357)
.|..+++|||+.|+|.|.++|+.++++||++++++++.|+.+++- +..|. ... +.+.-|+
T Consensus 53 ~l~~~~~pvva~V~g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~v----~~~~~~~~~~K~~~~~~~~~~~~A~~~gr~~ 128 (178)
T cd07021 53 LILNSPIPTIAYVNDRAASAGALIALAADEIYMAPGATIGAAEPI----PGDGNGAADEKVQSYWRAKMRAAAEKKGRDP 128 (178)
T ss_pred HHHhCCCCEEEEECCchHHHHHHHHHhCCeEEECCCCeEecCeeE----cCCCccchhHHHHHHHHHHHHHHHHHhCCCH
Confidence 677899999999999999999999999999999999999998543 33322 111 1222232
Q ss_pred H-HHHHHhcC-------------CCCCHHHHHHcCccceecCC
Q 018384 189 L-GEFLALTG-------------AKLNGAEMMACGLATHYSVS 217 (357)
Q Consensus 189 ~-a~~l~ltG-------------~~i~a~eA~~~GLv~~vv~~ 217 (357)
. +..|+-.. -.++++||++.|++|.++++
T Consensus 129 ~~a~~mv~~~~~v~~~~~~~~~~l~lta~eA~~~g~~d~ia~~ 171 (178)
T cd07021 129 DIAEAMVDKDIEVPGVGIKGGELLTLTADEALKVGYAEGIAGS 171 (178)
T ss_pred HHHHHHhhhhcccccccccccceeeeCHHHHHHhCCeEEEECC
Confidence 2 45555444 27999999999999999864
No 103
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=99.29 E-value=1.5e-11 Score=110.90 Aligned_cols=143 Identities=12% Similarity=-0.001 Sum_probs=101.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018384 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (357)
Q Consensus 57 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~ 136 (357)
.-+..++.+|.+.|+++..|+++++|||+..+..| ++.++.++ ...+..+...+|||||.
T Consensus 25 ~~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~gg-~~~~~~el-------------------~~~i~~~~~~~kpVia~ 84 (222)
T cd07018 25 ESSELSLRDLLEALEKAAEDDRIKGIVLDLDGLSG-GLAKLEEL-------------------RQALERFRASGKPVIAY 84 (222)
T ss_pred CcCCccHHHHHHHHHHHhcCCCeEEEEEECCCCCC-CHHHHHHH-------------------HHHHHHHHHhCCeEEEE
Confidence 34567789999999999999999999999988777 55555544 22334455679999999
Q ss_pred EccceechhhhhhccCCeEEEeCceEEeccccc------------ccccCC---------CcHHHH-----------Hh-
Q 018384 137 LNGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGFHPD---------AGASFY-----------LS- 183 (357)
Q Consensus 137 v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~------------~Gl~p~---------~g~~~~-----------l~- 183 (357)
++| |.+||+.|+++||.+++.+.+.|+..-+. +|+-+. .+..+. +.
T Consensus 85 ~~~-~~sggy~lasaad~I~a~p~~~vg~iGv~~~~~~~~~ll~klGv~~~~~~~G~~K~~~~~~~~~~~s~~~r~~~~~ 163 (222)
T cd07018 85 ADG-YSQGQYYLASAADEIYLNPSGSVELTGLSAETLFFKGLLDKLGVEVQVFRVGEYKSAVEPFTRDDMSPEAREQTQA 163 (222)
T ss_pred eCC-CCchhhhhhhhCCEEEECCCceEEeeccchhhhhHHHHHHHcCCcEEEEEEeccccccchhhcccCCHHHHHHHHH
Confidence 998 88999999999999999999998885432 222111 111110 01
Q ss_pred ----------------hcChHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 018384 184 ----------------HLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 220 (357)
Q Consensus 184 ----------------r~~g~~a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l 220 (357)
|-+.....+-+..|..+++++|++.||||++...+++
T Consensus 164 ~l~~~~~~f~~~Va~~R~~~~~~~~~~~~~~~~~~~~A~~~GLvD~i~~~~e~ 216 (222)
T cd07018 164 LLDSLWDQYLADVAASRGLSPDALEALIDLGGDSAEEALEAGLVDGLAYRDEL 216 (222)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCcHHHHHHHCCCCCcCCcHHHH
Confidence 1111221222356999999999999999999865544
No 104
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle
Probab=98.85 E-value=4.1e-08 Score=84.53 Aligned_cols=144 Identities=10% Similarity=0.194 Sum_probs=102.6
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHH
Q 018384 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 124 (357)
Q Consensus 45 ~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 124 (357)
.+|.++. .+++.+..-|.+.++.++.| ..+.|+|.=. |.|+.+... ..++.
T Consensus 2 ~vi~i~G-----~I~~~~~~~l~~~l~~A~~~-~~~~i~l~in----SPGG~v~~~-------------------~~I~~ 52 (172)
T cd07015 2 YVAQIKG-----QITSYTYDQFDRYITIAEQD-NAEAIIIELD----TPGGRADAA-------------------GNIVQ 52 (172)
T ss_pred EEEEEee-----EECHhHHHHHHHHHHHHhcC-CCCeEEEEEE----CCCCCHHHH-------------------HHHHH
Confidence 4455542 36677888889999998876 4677777643 555554321 12345
Q ss_pred HHhcCCCcEEEEEc---cceechhhhhhccCCeEEEeCceEEecccccccccCC----C-c---HHHHH------hhcCh
Q 018384 125 LLGTHLKPHVAILN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPD----A-G---ASFYL------SHLPG 187 (357)
Q Consensus 125 ~i~~~~kPvIa~v~---G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~----~-g---~~~~l------~r~~g 187 (357)
.|...++||++.|+ |.|..+|..++++||.+++.+++.++...+-.|..+. . . ....+ .+.-|
T Consensus 53 ~i~~~~~pvv~~v~p~g~~AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~G 132 (172)
T cd07015 53 RIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESG 132 (172)
T ss_pred HHHhcCcCEEEEEecCCCeehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHC
Confidence 56678999999999 9999999999999999999999999988875443220 0 0 01111 12223
Q ss_pred H--H-HHHHHhcCCCCCHHHHHHcCccceecCC
Q 018384 188 H--L-GEFLALTGAKLNGAEMMACGLATHYSVS 217 (357)
Q Consensus 188 ~--~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~ 217 (357)
+ . +..++-....++++||+++|++|.++++
T Consensus 133 r~~~~a~~~v~~~~~lta~EA~~~G~iD~ia~~ 165 (172)
T cd07015 133 RNATIAEEFITKDLSLTPEEALKYGVIEVVARD 165 (172)
T ss_pred cCHHHHHHHHHhhcCcCHHHHHHcCCceeeeCC
Confidence 2 2 6777888889999999999999999865
No 105
>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=98.81 E-value=1.8e-09 Score=101.11 Aligned_cols=175 Identities=20% Similarity=0.062 Sum_probs=140.4
Q ss_pred EEEEeC--CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC-CccccccChHHHHHhhccCChHHHH
Q 018384 37 LVEGKA--NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECK 113 (357)
Q Consensus 37 ~~~~~~--~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (357)
.++..| ++..+.|+ |+ .|..|.++..+|..-++.+..+..+++..+|+.. +.|++|.|..+.... ......
T Consensus 58 L~~~~Dy~~~~~~dmv-ie-av~edl~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vvg----~h~fsp 131 (380)
T KOG1683|consen 58 LVETLDYTGFANADMV-IE-AVFEDLELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVVG----MHFFSP 131 (380)
T ss_pred ccccccccccccccee-cc-chhhhHHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhcc----ccccCH
Confidence 444444 67778888 65 5999999999999999999999989999999988 999999999987653 233444
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEccceechh--hhhhccCCeEEEe--CceEEecccccccccCCCcHHHHHhhcChHH
Q 018384 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGG--AGVSIPGTFRVAC--GKTVFATPETLIGFHPDAGASFYLSHLPGHL 189 (357)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG--~~lal~~D~~ia~--~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~ 189 (357)
.++-++.+++....+++.|+.+++||++--|| +.++.||+|++.. ..-..+..+...++..+..-.-.+....|..
T Consensus 132 a~~m~LlEii~~~~tS~~~iA~Ain~~~~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~iD~~~t~fGf~ 211 (380)
T KOG1683|consen 132 AHWMQLLEIILALYTSKLTIATAINGGSPAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWLIDSLITKFGFR 211 (380)
T ss_pred HHHHHHHHHHHhcCCCchHHHHHHhcccccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHHHHHHHHhcCcc
Confidence 55667788999999999999999999998888 8899999999998 4555578888888533322333344456666
Q ss_pred -HHHHHhcCCCCCHHHHHHcCccceecCC
Q 018384 190 -GEFLALTGAKLNGAEMMACGLATHYSVS 217 (357)
Q Consensus 190 -a~~l~ltG~~i~a~eA~~~GLv~~vv~~ 217 (357)
+..-+--|.-++..||++-|+++++.|.
T Consensus 212 ~g~~~L~d~~gfdv~eal~~gl~~~~~~r 240 (380)
T KOG1683|consen 212 VGERALADGVGFDVAEALAVGLGDEIGPR 240 (380)
T ss_pred ccHHHHhhccCccHHHHHhhccchhccch
Confidence 5666678899999999999999999985
No 106
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas
Probab=98.72 E-value=1.3e-07 Score=80.94 Aligned_cols=132 Identities=13% Similarity=0.088 Sum_probs=89.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018384 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (357)
Q Consensus 58 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v 137 (357)
++..+..++...|..++.++..+.|+|.=+ |.|+++.. ...++..|...++||++.+
T Consensus 9 I~~~~~~~~~~~L~~l~~~~~~~~i~l~In----SpGG~v~~-------------------~~~i~~~i~~~~~~v~~~~ 65 (162)
T cd07013 9 VEDISANQFAAQLLFLGAVNPEKDIYLYIN----SPGGDVFA-------------------GMAIYDTIKFIKADVVTII 65 (162)
T ss_pred ECcHHHHHHHHHHHHHhcCCCCCCEEEEEE----CCCCcHHH-------------------HHHHHHHHHhcCCCceEEE
Confidence 567888999999999998877676666543 44554422 1234555667889999999
Q ss_pred ccceechhhhhhccCC--eEEEeCceEEecccccccccCCCcHH--H---------------HHhhcCh--HH-HHHHHh
Q 018384 138 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGAS--F---------------YLSHLPG--HL-GEFLAL 195 (357)
Q Consensus 138 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~Gl~p~~g~~--~---------------~l~r~~g--~~-a~~l~l 195 (357)
.|.|.++|..++++|| .|++.+++.|.+....-|.. +... . .+.+.-| .. ...++-
T Consensus 66 ~g~aaS~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~--g~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~ 143 (162)
T cd07013 66 DGLAASMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTL--GDATDMRIYADLLLKVEGNLVSAYAHKTGQSEEELHADLE 143 (162)
T ss_pred EeehhhHHHHHHHcCCCCcEEEecCEEEEEccCccccc--CCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHc
Confidence 9999999999999999 68888888887654332211 1111 0 1111122 12 344556
Q ss_pred cCCCCCHHHHHHcCcccee
Q 018384 196 TGAKLNGAEMMACGLATHY 214 (357)
Q Consensus 196 tG~~i~a~eA~~~GLv~~v 214 (357)
.+..++|+||+++||||++
T Consensus 144 ~~~~~sa~eA~~~GliD~i 162 (162)
T cd07013 144 RDTWLSAREAVEYGFADTI 162 (162)
T ss_pred CCccccHHHHHHcCCCCcC
Confidence 6666799999999999985
No 107
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.68 E-value=1.5e-07 Score=83.49 Aligned_cols=136 Identities=15% Similarity=0.083 Sum_probs=87.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018384 56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 135 (357)
Q Consensus 56 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa 135 (357)
..++.++...+...|..++.++..+.|.|.=. |.|+|+..- ..++..|...+.|+++
T Consensus 38 g~I~~~~~~~i~~~L~~l~~~~~~~~I~l~In----SpGG~v~~g-------------------~~I~d~i~~~~~~v~t 94 (200)
T PRK00277 38 GEVEDHMANLIVAQLLFLEAEDPDKDIYLYIN----SPGGSVTAG-------------------LAIYDTMQFIKPDVST 94 (200)
T ss_pred CEECHHHHHHHHHHHHHhhccCCCCCEEEEEE----CCCCcHHHH-------------------HHHHHHHHhcCCCEEE
Confidence 34778899999999998886543333333221 334443221 1234456667889999
Q ss_pred EEccceechhhhhhccCC--eEEEeCceEEecccccccccCCCcHH------------------HHHhhcChH--H-HHH
Q 018384 136 ILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGAS------------------FYLSHLPGH--L-GEF 192 (357)
Q Consensus 136 ~v~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~Gl~p~~g~~------------------~~l~r~~g~--~-a~~ 192 (357)
.+.|.|.++|..++++++ .|++.+++.|++....-|. .|.. ..+...-|. . ...
T Consensus 95 ~~~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~---~G~a~di~~~a~~l~~~~~~~~~~~a~~tg~~~~~i~~ 171 (200)
T PRK00277 95 ICIGQAASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGF---QGQATDIEIHAREILKLKKRLNEILAEHTGQPLEKIEK 171 (200)
T ss_pred EEEeEeccHHHHHHhcCCCCCEEEcCCceEEeccCcccc---cCChhHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 999999999999998743 5777666666665443221 1111 112222332 2 455
Q ss_pred HHhcCCCCCHHHHHHcCccceecCC
Q 018384 193 LALTGAKLNGAEMMACGLATHYSVS 217 (357)
Q Consensus 193 l~ltG~~i~a~eA~~~GLv~~vv~~ 217 (357)
++-.+..++|+||+++||||+|++.
T Consensus 172 ~~~~~~~lsa~EA~e~GliD~Ii~~ 196 (200)
T PRK00277 172 DTDRDNFMSAEEAKEYGLIDEVLTK 196 (200)
T ss_pred HhhCCccccHHHHHHcCCccEEeec
Confidence 6667888999999999999999965
No 108
>PRK10949 protease 4; Provisional
Probab=98.66 E-value=3.3e-07 Score=93.85 Aligned_cols=153 Identities=16% Similarity=0.202 Sum_probs=98.6
Q ss_pred eCCEEEEEEcCC-----CCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHH
Q 018384 41 KANSRMAILNRP-----SALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (357)
Q Consensus 41 ~~~v~~I~ln~p-----~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (357)
.+.|++|.++.+ ...+.++. ..+.+.|+.+..|+++|+|||.-. |.|+.... .
T Consensus 325 ~~~Iavi~~~G~I~~g~~~~g~~~~---~~~~~~l~~a~~D~~vkaVvLrIn----SpGGs~~a------------s--- 382 (618)
T PRK10949 325 GGSIAVIFANGAIMDGEETPGNVGG---DTTAAQIRDARLDPKVKAIVLRVN----SPGGSVTA------------S--- 382 (618)
T ss_pred CCeEEEEEEEEEEcCCCCcCCCcCH---HHHHHHHHHHHhCCCCcEEEEEec----CCCCcHHH------------H---
Confidence 467888887632 12233444 467778999999999999999976 33332211 1
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccc------------cccccCCCcHH----
Q 018384 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET------------LIGFHPDAGAS---- 179 (357)
Q Consensus 116 ~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~Gl~p~~g~~---- 179 (357)
+.+.+.+..+....||||+.+.|.|..||+-++++||.+++.+.+..+.-.+ ++|+-+....+
T Consensus 383 -e~i~~~i~~~r~~gKPVvas~~~~aASggY~iA~aad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~~~ 461 (618)
T PRK10949 383 -EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLA 461 (618)
T ss_pred -HHHHHHHHHHHhcCCcEEEEECCCCccHHHHHHHhcCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccccC
Confidence 1122233444567899999999999999999999999999999765443221 23432221100
Q ss_pred -------------HHHh-----------------hcChHHHHHHHhcCCCCCHHHHHHcCccceecC
Q 018384 180 -------------FYLS-----------------HLPGHLGEFLALTGAKLNGAEMMACGLATHYSV 216 (357)
Q Consensus 180 -------------~~l~-----------------r~~g~~a~~l~ltG~~i~a~eA~~~GLv~~vv~ 216 (357)
..+. |-+.....+-+..|+.|++++|++.||||++-.
T Consensus 462 ~~~~~~~~s~e~~~~~q~~ld~~y~~F~~~Va~~R~~~~~~v~~ia~Grv~tg~~A~~~GLVD~lG~ 528 (618)
T PRK10949 462 DVSITKALPPEFQQMMQLSIENGYKRFITLVADSRHKTPEQIDKIAQGHVWTGQDAKANGLVDSLGD 528 (618)
T ss_pred CccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHhcCCcccHHHHHHcCCCccCCC
Confidence 0111 111222122356899999999999999999965
No 109
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.55 E-value=6.2e-07 Score=79.88 Aligned_cols=137 Identities=14% Similarity=0.050 Sum_probs=95.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018384 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (357)
Q Consensus 57 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~ 136 (357)
.++..+..++...|..++.++..+.|.|.=. |.|+++..- ..++..|..++.||++.
T Consensus 43 ~I~~~~~~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~~g-------------------~~I~d~i~~~~~~v~t~ 99 (207)
T PRK12553 43 QVDDASANDVMAQLLVLESIDPDRDITLYIN----SPGGSVTAG-------------------DAIYDTIQFIRPDVQTV 99 (207)
T ss_pred eECHHHHHHHHHHHHHHHhCCCCCCEEEEEe----CCCCcHHHH-------------------HHHHHHHHhcCCCcEEE
Confidence 4788999999999999986543343333322 444444321 12445566778899999
Q ss_pred EccceechhhhhhccCC--eEEEeCceEEecccccccccCCCcHH------------------HHHhhcChH--H-HHHH
Q 018384 137 LNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGAS------------------FYLSHLPGH--L-GEFL 193 (357)
Q Consensus 137 v~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~Gl~p~~g~~------------------~~l~r~~g~--~-a~~l 193 (357)
+.|.|.+.|.-++++|| .|++.+++.|.+.....+- +..|-. ..+.+.-|. . ..++
T Consensus 100 ~~G~aaSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~-~~~G~a~d~~~~~~~l~~~~~~~~~~ya~~tg~~~e~i~~~ 178 (207)
T PRK12553 100 CTGQAASAGAVLLAAGTPGKRFALPNARILIHQPSLGG-GIRGQASDLEIQAREILRMRERLERILAEHTGQSVEKIRKD 178 (207)
T ss_pred EEeehhhHHHHHHHcCCcCcEEECCCchhhhcCccccC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 99999999999999999 5999999999887765310 112211 112222332 2 4556
Q ss_pred HhcCCCCCHHHHHHcCccceecCC
Q 018384 194 ALTGAKLNGAEMMACGLATHYSVS 217 (357)
Q Consensus 194 ~ltG~~i~a~eA~~~GLv~~vv~~ 217 (357)
+-.+..++|+||+++||||+|+++
T Consensus 179 ~~~~~~lta~EA~e~GliD~I~~~ 202 (207)
T PRK12553 179 TDRDKWLTAEEAKDYGLVDQIITS 202 (207)
T ss_pred HhcCccccHHHHHHcCCccEEcCc
Confidence 678899999999999999999964
No 110
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional
Probab=98.51 E-value=1.6e-05 Score=72.83 Aligned_cols=139 Identities=17% Similarity=0.112 Sum_probs=94.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018384 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (357)
Q Consensus 55 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvI 134 (357)
...++++-.+...+.++.+++. .+-+|-|.-.++++. |.+-.+ ......+.+.+..+...++|+|
T Consensus 76 ~G~~~~~g~rKa~R~~~lA~~~-~lPvV~lvDtpGa~~-g~~aE~-------------~G~~~~ia~~~~~~s~~~VP~I 140 (256)
T PRK12319 76 FGQPHPEGYRKALRLMKQAEKF-GRPVVTFINTAGAYP-GVGAEE-------------RGQGEAIARNLMEMSDLKVPII 140 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCcCC-CHhHHh-------------ccHHHHHHHHHHHHhCCCCCEE
Confidence 4678899999999999888765 356666655444443 332110 1123344556677788999999
Q ss_pred EEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHHHHhcCCCCCHHHHHHcCccce
Q 018384 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATH 213 (357)
Q Consensus 135 a~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~ 213 (357)
+.|-|.|.|||......||++++.+++.|+.- .|.++....+...--.. +.+.+ .+++.++.+.|+||+
T Consensus 141 sVI~G~~~gGgA~a~~~~D~v~m~~~a~~~v~------~pe~~a~il~~~~~~a~~aa~~~----~~~a~~l~~~g~iD~ 210 (256)
T PRK12319 141 AIIIGEGGSGGALALAVADQVWMLENTMYAVL------SPEGFASILWKDGSRATEAAELM----KITAGELLEMGVVDK 210 (256)
T ss_pred EEEeCCcCcHHHHHhhcCCEEEEecCceEEEc------CHHHHHHHHhcCcccHHHHHHHc----CCCHHHHHHCCCCcE
Confidence 99999999998888889999999998877642 34443333332221112 33333 779999999999999
Q ss_pred ecCCC
Q 018384 214 YSVSE 218 (357)
Q Consensus 214 vv~~~ 218 (357)
|+|+.
T Consensus 211 ii~e~ 215 (256)
T PRK12319 211 VIPEH 215 (256)
T ss_pred ecCCC
Confidence 99754
No 111
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ
Probab=98.47 E-value=6.9e-07 Score=77.28 Aligned_cols=132 Identities=17% Similarity=0.096 Sum_probs=92.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018384 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (357)
Q Consensus 58 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v 137 (357)
++.+...++...+..+..++..+.|+|.=. |.|+|+..- ..++..+...+.|+++.+
T Consensus 18 I~~~~~~~i~~~l~~~~~~~~~~~i~l~in----SpGG~v~~~-------------------~~i~~~l~~~~~~v~t~~ 74 (171)
T cd07017 18 IDDEVANLIIAQLLYLESEDPKKPIYLYIN----SPGGSVTAG-------------------LAIYDTMQYIKPPVSTIC 74 (171)
T ss_pred EcHHHHHHHHHHHHHHHccCCCCceEEEEE----CCCCCHHHH-------------------HHHHHHHHhcCCCEEEEE
Confidence 677888999999999988765454444332 444444321 123344556789999999
Q ss_pred ccceechhhhhhccCC--eEEEeCceEEecccccccccCCCcHHHH-----------------HhhcChH--H-HHHHHh
Q 018384 138 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASFY-----------------LSHLPGH--L-GEFLAL 195 (357)
Q Consensus 138 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~Gl~p~~g~~~~-----------------l~r~~g~--~-a~~l~l 195 (357)
.|.|.++|.-+++++| .|++.+++.|.+.+...+..-. .... +....|. . ...++-
T Consensus 75 ~g~aaS~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~--~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~ 152 (171)
T cd07017 75 LGLAASMGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQ--ASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTD 152 (171)
T ss_pred EeEehhHHHHHHHcCCCCCEEEccchHHHHcCCCccCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhh
Confidence 9999999999999999 7999999999998876554222 1110 1111121 2 355566
Q ss_pred cCCCCCHHHHHHcCcccee
Q 018384 196 TGAKLNGAEMMACGLATHY 214 (357)
Q Consensus 196 tG~~i~a~eA~~~GLv~~v 214 (357)
.+..++++||+++||||+|
T Consensus 153 ~~~~lta~EA~e~GiiD~V 171 (171)
T cd07017 153 RDRYMSAEEAKEYGLIDKI 171 (171)
T ss_pred CCccccHHHHHHcCCCccC
Confidence 8888999999999999986
No 112
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional
Probab=98.44 E-value=1.1e-05 Score=75.68 Aligned_cols=140 Identities=13% Similarity=0.055 Sum_probs=94.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018384 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (357)
Q Consensus 55 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvI 134 (357)
...++++-++...+.++.++... +-+|-|--.+++++ |.+-.+ ......+.+.+..+....+|+|
T Consensus 132 ~G~~~p~g~rKa~Rlm~lA~~f~-lPIItlvDTpGA~~-G~~AE~-------------~G~~~aiar~l~~~a~~~VP~I 196 (322)
T CHL00198 132 FGMPSPGGYRKALRLMKHANKFG-LPILTFIDTPGAWA-GVKAEK-------------LGQGEAIAVNLREMFSFEVPII 196 (322)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcCc-CHHHHH-------------HhHHHHHHHHHHHHHcCCCCEE
Confidence 45788999999999999888653 55565554444443 322111 1122334455666788999999
Q ss_pred EEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHHHHhcCCCCCHHHHHHcCcccee
Q 018384 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 214 (357)
Q Consensus 135 a~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~i~a~eA~~~GLv~~v 214 (357)
++|-|.|.|||.-....||++++.+++.|+.- .|.++++..+... .. +.+ +.....++|+++++.|+||+|
T Consensus 197 sVViGeggsGGAlal~~aD~V~m~e~a~~sVi------sPEg~a~Il~~d~-~~-a~~-aA~~~~ita~dL~~~giiD~i 267 (322)
T CHL00198 197 CTIIGEGGSGGALGIGIGDSIMMLEYAVYTVA------TPEACAAILWKDS-KK-SLD-AAEALKITSEDLKVLGIIDEI 267 (322)
T ss_pred EEEeCcccHHHHHhhhcCCeEEEeCCeEEEec------CHHHHHHHHhcch-hh-HHH-HHHHcCCCHHHHHhCCCCeEe
Confidence 99999998888655556999999999887742 3555444443322 21 222 234468999999999999999
Q ss_pred cCCC
Q 018384 215 SVSE 218 (357)
Q Consensus 215 v~~~ 218 (357)
+|..
T Consensus 268 i~Ep 271 (322)
T CHL00198 268 IPEP 271 (322)
T ss_pred ccCC
Confidence 9753
No 113
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=98.43 E-value=2.5e-06 Score=75.32 Aligned_cols=137 Identities=14% Similarity=0.089 Sum_probs=89.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018384 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (357)
Q Consensus 58 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v 137 (357)
++..+...+...|..++..+..+.|.|.=. |.|+++..- ..++..|...+.||++.+
T Consensus 32 I~~~~~~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~ag-------------------~aI~d~i~~~~~~V~t~v 88 (197)
T PRK14512 32 INKDLSELFQEKILLLEALDSKKPIFVYID----SEGGDIDAG-------------------FAIFNMIRFVKPKVFTIG 88 (197)
T ss_pred EcHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHHHH-------------------HHHHHHHHhCCCCEEEEE
Confidence 667888888888888876232343333322 444444321 124455667899999999
Q ss_pred ccceechhhhhhccCCe--EEEeCceEEecccccccccCCCcHH---------------HHHhhcChH--H-HHHHHhcC
Q 018384 138 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGAS---------------FYLSHLPGH--L-GEFLALTG 197 (357)
Q Consensus 138 ~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~---------------~~l~r~~g~--~-a~~l~ltG 197 (357)
.|.|.+.|.-++++||- |++.+++.|.+-...-|+.....-. ..+...-|. . ...++-..
T Consensus 89 ~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l~~~~~~i~~~~a~~tg~~~~~i~~~~~~d 168 (197)
T PRK14512 89 VGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANELNKVKSELNDIIAKETGQELDKVEKDTDRD 168 (197)
T ss_pred EeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHhhhcC
Confidence 99999999999999985 8999998887665543321111000 001112222 1 34555566
Q ss_pred CCCCHHHHHHcCccceecCC
Q 018384 198 AKLNGAEMMACGLATHYSVS 217 (357)
Q Consensus 198 ~~i~a~eA~~~GLv~~vv~~ 217 (357)
..++|+||+++||||+|++.
T Consensus 169 ~~lta~EA~~yGliD~I~~~ 188 (197)
T PRK14512 169 FWLDSSSAVKYGLVFEVVET 188 (197)
T ss_pred cccCHHHHHHcCCccEeecC
Confidence 78999999999999999975
No 114
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....
Probab=98.42 E-value=1.4e-06 Score=76.12 Aligned_cols=135 Identities=16% Similarity=0.171 Sum_probs=89.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCce--EEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018384 58 LNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 135 (357)
Q Consensus 58 l~~~~~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa 135 (357)
+|.++...+...|..++.++..+ .|.|. |.|+|+... ..++..|..++.|+++
T Consensus 25 I~~~~~~~~~~~L~~l~~~~~~~~i~i~IN------SpGG~v~~g-------------------~~i~~~i~~~~~~v~t 79 (182)
T PF00574_consen 25 IDEESANRLISQLLYLENEDKNKPINIYIN------SPGGDVDAG-------------------LAIYDAIRSSKAPVTT 79 (182)
T ss_dssp BSHHHHHHHHHHHHHHHHHTSSSEEEEEEE------ECEBCHHHH-------------------HHHHHHHHHSSSEEEE
T ss_pred cCHHHHHHHHHHHHHHhccCCCceEEEEEc------CCCCccHHH-------------------HHHHHHHHhcCCCeEE
Confidence 78899999998888774332222 33344 455555331 2345567788999999
Q ss_pred EEccceechhhhhhccCCe--EEEeCceEEecccccccccCCCcHHH----HH-----------hhcCh--HH-HHHHHh
Q 018384 136 ILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF----YL-----------SHLPG--HL-GEFLAL 195 (357)
Q Consensus 136 ~v~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~~----~l-----------~r~~g--~~-a~~l~l 195 (357)
.+.|.|.+.|..++++||. |++.+++.|.+.+...+......-.. .+ ....| .. ..+++-
T Consensus 80 ~~~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~ 159 (182)
T PF00574_consen 80 VVLGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYAERTGLSKEEIEELMD 159 (182)
T ss_dssp EEEEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHCS
T ss_pred EEeCccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHh
Confidence 9999999999999999999 89999999999988766533111100 01 01111 11 344455
Q ss_pred cCCCCCHHHHHHcCccceecCC
Q 018384 196 TGAKLNGAEMMACGLATHYSVS 217 (357)
Q Consensus 196 tG~~i~a~eA~~~GLv~~vv~~ 217 (357)
...-++++||+++||||+|+.+
T Consensus 160 ~~~~l~a~EA~~~GiiD~I~~~ 181 (182)
T PF00574_consen 160 RDTWLSAEEALEYGIIDEIIES 181 (182)
T ss_dssp STEEEEHHHHHHHTSSSEEESS
T ss_pred CCccccHHHHHHcCCCCEeccC
Confidence 5566899999999999999864
No 115
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional
Probab=98.36 E-value=1.9e-05 Score=75.97 Aligned_cols=137 Identities=15% Similarity=0.078 Sum_probs=92.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018384 56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 135 (357)
Q Consensus 56 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa 135 (357)
..++++-++...+.++.++... +-+|-|.-.++++ .|.+..+ ......+...+..+....+|+|+
T Consensus 200 G~~~peGyRKAlR~mklAekf~-lPIVtLVDTpGA~-pG~~AEe-------------~Gqa~aIAr~l~ams~l~VPiIS 264 (431)
T PLN03230 200 AMPQPNGYRKALRFMRHAEKFG-FPILTFVDTPGAY-AGIKAEE-------------LGQGEAIAFNLREMFGLRVPIIA 264 (431)
T ss_pred CCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcC-CCHHHHH-------------HhHHHHHHHHHHHHhcCCCCEEE
Confidence 4688999999999999888653 5556555443333 2222111 11234455567778899999999
Q ss_pred EEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHHHHhcCCCCCHHHHHHcCcccee
Q 018384 136 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHY 214 (357)
Q Consensus 136 ~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~v 214 (357)
.|-|.+.+||.....+||++++.+++.++.- .|.++++..+....-.. +.+ ...++++++++.|+||+|
T Consensus 265 VViGeGgSGGAlalg~aD~VlMle~A~ysVi------sPEgaAsILwkd~~~A~eAAe----alkitA~dL~~~GiID~I 334 (431)
T PLN03230 265 TVIGEGGSGGALAIGCGNRMLMMENAVYYVA------SPEACAAILWKSAAAAPKAAE----ALRITAAELVKLGVVDEI 334 (431)
T ss_pred EEeCCCCcHHHHHhhcCCEEEEecCCEEEec------CHHHHHHHHhccccchHHHHH----HcCCCHHHHHhCCCCeEe
Confidence 9999996666554457899999999876542 35454554443332222 333 338999999999999999
Q ss_pred cCC
Q 018384 215 SVS 217 (357)
Q Consensus 215 v~~ 217 (357)
+|.
T Consensus 335 I~E 337 (431)
T PLN03230 335 VPE 337 (431)
T ss_pred ccC
Confidence 975
No 116
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=98.32 E-value=2.9e-05 Score=72.83 Aligned_cols=139 Identities=12% Similarity=0.074 Sum_probs=92.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018384 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (357)
Q Consensus 55 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvI 134 (357)
...++++-.+...+.++.++.- .+-+|-|.-.+++++ |.+..+ ......+.+.+..+....+|+|
T Consensus 129 ~G~~~p~g~rKa~R~m~lA~~f-~iPvVtlvDTpGa~~-g~~aE~-------------~G~~~aia~~l~a~s~~~VP~I 193 (316)
T TIGR00513 129 FGMPAPEGYRKALRLMKMAERF-KMPIITFIDTPGAYP-GIGAEE-------------RGQSEAIARNLREMARLGVPVI 193 (316)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCCCC-CHHHHH-------------HHHHHHHHHHHHHHHcCCCCEE
Confidence 4578899999999999888765 356666654444433 322111 1123345556677788999999
Q ss_pred EEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHH-HHHHHhcCCCCCHHHHHHcCccce
Q 018384 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATH 213 (357)
Q Consensus 135 a~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~ 213 (357)
++|-|.|.|||..-...||++++.+++.++. +.|.++++..+...--.. +.+ -..+++.++++.|+||+
T Consensus 194 sVViGeggsGGAla~~~aD~v~m~~~a~~sV------isPEg~a~Il~kd~~~a~~aae----~~~~ta~~l~~~G~iD~ 263 (316)
T TIGR00513 194 CTVIGEGGSGGALAIGVGDKVNMLEYSTYSV------ISPEGCAAILWKDASKAPKAAE----AMKITAPDLKELGLIDS 263 (316)
T ss_pred EEEecccccHHHhhhccCCEEEEecCceEEe------cCHHHHHHHhccchhhHHHHHH----HccCCHHHHHHCCCCeE
Confidence 9999999777775555699999999987763 234444444333211111 333 25678999999999999
Q ss_pred ecCCC
Q 018384 214 YSVSE 218 (357)
Q Consensus 214 vv~~~ 218 (357)
|+|..
T Consensus 264 II~ep 268 (316)
T TIGR00513 264 IIPEP 268 (316)
T ss_pred eccCC
Confidence 99753
No 117
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=98.32 E-value=2.3e-05 Score=79.98 Aligned_cols=139 Identities=13% Similarity=0.022 Sum_probs=94.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018384 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (357)
Q Consensus 55 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvI 134 (357)
..+++++-++...+.++.++... +-+|-|-=.+++++ |.+... ......+.+.+..+....+|+|
T Consensus 220 fG~~~peGyRKAlRlmkLAekfg-LPIVtLVDTpGA~p-G~~AEe-------------~Gq~~aIArnl~amasl~VP~I 284 (762)
T PLN03229 220 FGMPTPHGYRKALRMMYYADHHG-FPIVTFIDTPGAYA-DLKSEE-------------LGQGEAIAHNLRTMFGLKVPIV 284 (762)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCcCC-CchhHH-------------HhHHHHHHHHHHHHhCCCCCEE
Confidence 45788998999999988887653 55555554444443 322221 1223445566777889999999
Q ss_pred EEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHHHHhcCCCCCHHHHHHcCcccee
Q 018384 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 214 (357)
Q Consensus 135 a~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~i~a~eA~~~GLv~~v 214 (357)
++|-|.|.|||.-....||++++.+++.|+. +.|.++++..+...--.. + +.....++|++++++|+||+|
T Consensus 285 SVViGeggSGGAlA~g~aD~VlMle~A~~sV------isPEgaAsILwkd~~~A~--e-AAe~lkiTa~dL~~lGiiD~I 355 (762)
T PLN03229 285 SIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKAAP--K-AAEKLRITAQELCRLQIADGI 355 (762)
T ss_pred EEEeCCcchHHHHHhhcCCEEEEecCCeEEe------cCHHHHHHHHhcCcccHH--H-HHHHcCCCHHHHHhCCCCeee
Confidence 9999999888877777799999999887653 234444444333322112 1 234468999999999999999
Q ss_pred cCC
Q 018384 215 SVS 217 (357)
Q Consensus 215 v~~ 217 (357)
+|.
T Consensus 356 IpE 358 (762)
T PLN03229 356 IPE 358 (762)
T ss_pred ccC
Confidence 985
No 118
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit
Probab=98.32 E-value=6.2e-06 Score=72.87 Aligned_cols=137 Identities=13% Similarity=0.076 Sum_probs=94.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018384 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (357)
Q Consensus 57 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~ 136 (357)
.+|.++..++...|-.++.++..+-|.|.=+ |.|+|+..- ..++..+...+.||...
T Consensus 38 ~i~~~~a~~ii~~ll~L~~~~~~~~I~l~IN----SpGG~v~~g-------------------~aIyd~m~~~~~~V~Tv 94 (200)
T CHL00028 38 EVDDEIANQLIGLMVYLSIEDDTKDLYLFIN----SPGGSVISG-------------------LAIYDTMQFVKPDVHTI 94 (200)
T ss_pred eecHHHHHHHHHHHHHHhccCCCCCEEEEEe----CCCcchhhH-------------------HHHHHHHHhcCCCEEEE
Confidence 4889999999999999875443343332211 334443221 22455677789999999
Q ss_pred EccceechhhhhhccCC--eEEEeCceEEecccccccccCCCcH-HH-----------------HHhhcChH--H-HHHH
Q 018384 137 LNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGA-SF-----------------YLSHLPGH--L-GEFL 193 (357)
Q Consensus 137 v~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~Gl~p~~g~-~~-----------------~l~r~~g~--~-a~~l 193 (357)
+.|.|.+.|.-|++++| -|++.+++.|.+.....|+. .|- +. .+...-|. . ..++
T Consensus 95 ~~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~--~G~a~di~~~a~~l~~~~~~~~~~ya~~Tg~~~e~i~~~ 172 (200)
T CHL00028 95 CLGLAASMASFILAGGEITKRLAFPHARVMIHQPASSFY--EGQASEFVLEAEELLKLRETITRVYAQRTGKPLWVISED 172 (200)
T ss_pred EEEehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence 99999999999999999 69999999999887765521 121 11 11111222 1 3455
Q ss_pred HhcCCCCCHHHHHHcCccceecCCC
Q 018384 194 ALTGAKLNGAEMMACGLATHYSVSE 218 (357)
Q Consensus 194 ~ltG~~i~a~eA~~~GLv~~vv~~~ 218 (357)
+-....++|+||+++||||+|+++.
T Consensus 173 ~~r~~~lta~EA~eyGliD~I~~~~ 197 (200)
T CHL00028 173 MERDVFMSATEAKAYGIVDLVAVNN 197 (200)
T ss_pred hhcCccCCHHHHHHcCCCcEEeecC
Confidence 5667779999999999999998653
No 119
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
Probab=98.28 E-value=3e-05 Score=72.80 Aligned_cols=140 Identities=11% Similarity=0.061 Sum_probs=94.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018384 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (357)
Q Consensus 55 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvI 134 (357)
...++++-.+...+.++.++.- .+-+|-|.-.+++++ |.+-.+ ......+.+++..+....+|+|
T Consensus 129 ~G~~~peg~rKa~R~m~lA~~f-~lPIVtlvDTpGa~~-G~~aE~-------------~G~~~aia~~l~~~a~~~VP~I 193 (319)
T PRK05724 129 FGMPRPEGYRKALRLMKMAEKF-GLPIITFIDTPGAYP-GIGAEE-------------RGQSEAIARNLREMARLKVPII 193 (319)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCCC-CHHHHh-------------ccHHHHHHHHHHHHhCCCCCEE
Confidence 4578899999999998888764 466666665544444 432211 1123445566777889999999
Q ss_pred EEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHHHHhcCCCCCHHHHHHcCcccee
Q 018384 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 214 (357)
Q Consensus 135 a~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~i~a~eA~~~GLv~~v 214 (357)
+.|-|.|.|||..-...||++++.+++.|+ +.++-|++..|.+-... +.+. -....+++.++++.|+||+|
T Consensus 194 sVIiGeg~sGGAla~~~aD~v~m~~~A~~s-------visPEg~a~Il~~~~~~-a~~a-ae~~~ita~~l~~~g~iD~I 264 (319)
T PRK05724 194 CTVIGEGGSGGALAIGVGDRVLMLEYSTYS-------VISPEGCASILWKDASK-APEA-AEAMKITAQDLKELGIIDEI 264 (319)
T ss_pred EEEeCCccHHHHHHHhccCeeeeecCceEe-------ecCHHHHHHHHhcCchh-HHHH-HHHcCCCHHHHHHCCCceEe
Confidence 999999988777555569999999888765 33333444444333222 2222 12456899999999999999
Q ss_pred cCCC
Q 018384 215 SVSE 218 (357)
Q Consensus 215 v~~~ 218 (357)
+|..
T Consensus 265 I~Ep 268 (319)
T PRK05724 265 IPEP 268 (319)
T ss_pred ccCC
Confidence 9753
No 120
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP. This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.
Probab=98.27 E-value=1.3e-05 Score=70.60 Aligned_cols=137 Identities=15% Similarity=0.040 Sum_probs=89.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018384 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (357)
Q Consensus 57 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~ 136 (357)
.++..+...+...|..++.++..+.|+|.=. |.|+|+..- ..++..+...+.||...
T Consensus 34 ~I~~~~~~~ii~~L~~l~~~~~~~~i~l~In----SpGG~v~~g-------------------~~I~d~l~~~~~~v~t~ 90 (191)
T TIGR00493 34 EVNDSVANLIVAQLLFLEAEDPEKDIYLYIN----SPGGSITAG-------------------LAIYDTMQFIKPDVSTI 90 (191)
T ss_pred EEChHHHHHHHHHHHHhhccCCCCCEEEEEE----CCCCCHHHH-------------------HHHHHHHHhcCCCEEEE
Confidence 3667788888888888886554444443322 345554321 12344455667778888
Q ss_pred EccceechhhhhhccCC--eEEEeCceEEecccccccccCCCcHH---------------HHHhhcChH--H-HHHHHhc
Q 018384 137 LNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGAS---------------FYLSHLPGH--L-GEFLALT 196 (357)
Q Consensus 137 v~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~Gl~p~~g~~---------------~~l~r~~g~--~-a~~l~lt 196 (357)
+.|.|.+.|..+++++| .|++.+++.|.+.+...|......-. ..+.+.-|. . ..+++-.
T Consensus 91 ~~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya~~tg~~~~~i~~~~~~ 170 (191)
T TIGR00493 91 CIGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILANHTGQSLEQIEKDTER 170 (191)
T ss_pred EEEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhC
Confidence 88999999998888765 69999999999876654432111111 012222332 2 4556677
Q ss_pred CCCCCHHHHHHcCccceecC
Q 018384 197 GAKLNGAEMMACGLATHYSV 216 (357)
Q Consensus 197 G~~i~a~eA~~~GLv~~vv~ 216 (357)
+..++|+||+++||||+|+.
T Consensus 171 ~~~lta~EA~~~GliD~ii~ 190 (191)
T TIGR00493 171 DFFMSAEEAKEYGLIDSVLT 190 (191)
T ss_pred CccCcHHHHHHcCCccEEec
Confidence 88899999999999999975
No 121
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.13 E-value=2e-05 Score=74.81 Aligned_cols=86 Identities=19% Similarity=0.295 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q 018384 62 MGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVT 141 (357)
Q Consensus 62 ~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a 141 (357)
..+.+.+.|+.+..|+++++|+|.=. |.|+....- ..+++.++++..-. ||++.+++.|
T Consensus 81 ~~~~~~~~l~~~~~~~~vk~vvL~in----SPGG~v~as----------------~~i~~~l~~l~~~~-PV~v~v~~~A 139 (317)
T COG0616 81 GGDDIEEILRAARADPSVKAVVLRIN----SPGGSVVAS----------------ELIARALKRLRAKK-PVVVSVGGYA 139 (317)
T ss_pred cHHHHHHHHHHHhcCCCCceEEEEEE----CcCCchhHH----------------HHHHHHHHHHhhcC-CEEEEECCee
Confidence 35566677888999999999999754 445433211 12233344444444 9999999999
Q ss_pred echhhhhhccCCeEEEeCceEEecccc
Q 018384 142 MGGGAGVSIPGTFRVACGKTVFATPET 168 (357)
Q Consensus 142 ~GgG~~lal~~D~~ia~~~a~f~~pe~ 168 (357)
..||+.++++||.+||++.+..|---+
T Consensus 140 ASGGY~IA~aAd~I~a~p~si~GSIGV 166 (317)
T COG0616 140 ASGGYYIALAADKIVADPSSITGSIGV 166 (317)
T ss_pred cchhhhhhccCCEEEecCCceeeecee
Confidence 999999999999999999887664433
No 122
>PRK11778 putative inner membrane peptidase; Provisional
Probab=98.13 E-value=2.3e-05 Score=74.07 Aligned_cols=156 Identities=12% Similarity=0.062 Sum_probs=92.6
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHH
Q 018384 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY 120 (357)
Q Consensus 41 ~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~ 120 (357)
++.|++|.++.+=..+ -...+-+++...+..+..+ .+|||.-. |.|+.+..... ..
T Consensus 89 ~~~v~VI~~~G~I~~~-~~~~l~e~i~a~l~~A~~~---~aVvLrid----SpGG~v~~s~~----------------a~ 144 (330)
T PRK11778 89 KPRLFVLDFKGDIDAS-EVESLREEITAILAVAKPG---DEVLLRLE----SPGGVVHGYGL----------------AA 144 (330)
T ss_pred CCeEEEEEEEEEECCC-cchhhHHHHHHHHHhccCC---CeEEEEEe----CCCCchhHHHH----------------HH
Confidence 4678888888653211 1223445555555554433 46777654 33333221100 00
Q ss_pred HHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEeccccc------------ccccCC---------CcH-
Q 018384 121 SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGFHPD---------AGA- 178 (357)
Q Consensus 121 ~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~------------~Gl~p~---------~g~- 178 (357)
..+.++....||+|+.+++.|..||+.++++||-+++.+.+.++...+- +|+-+. .+.
T Consensus 145 ~~l~~lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGSIGVi~~~~~~~~lLeKlGI~~evi~aG~yK~a~~p 224 (330)
T PRK11778 145 SQLQRLRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGSIGVVAQIPNFHRLLKKHDIDVELHTAGEYKRTLTL 224 (330)
T ss_pred HHHHHHHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEeeeeeeeccCHHHHHHHCCCceEEEEecCccCCCCC
Confidence 1133455678999999999999999999999999999998876654332 222100 000
Q ss_pred ----H----HHHhhcCh---------------HHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 018384 179 ----S----FYLSHLPG---------------HLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 220 (357)
Q Consensus 179 ----~----~~l~r~~g---------------~~a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l 220 (357)
+ ..+...+. ..-.+-+.+|+.+++++|++.||||++...+++
T Consensus 225 f~~~see~Re~~q~~Ld~~y~~F~~~Va~~R~~l~~~~va~G~v~~g~~Al~~GLVD~Ig~~dd~ 289 (330)
T PRK11778 225 FGENTEEGREKFREELEETHQLFKDFVQRYRPQLDIDKVATGEHWYGQQALELGLVDEIQTSDDY 289 (330)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHhCCCcCHHHHHHCCCCCcCCCHHHH
Confidence 0 00111111 011223568999999999999999999765554
No 123
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=98.13 E-value=3.7e-05 Score=67.90 Aligned_cols=137 Identities=12% Similarity=0.093 Sum_probs=93.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCce--EEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcE
Q 018384 56 NALNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH 133 (357)
Q Consensus 56 Nal~~~~~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPv 133 (357)
..++.++-..+...|-.++.++.-+ -|.|-+ .|+|+..- ..++..+...+-||
T Consensus 34 ~~i~~~~a~~ii~~Ll~L~~~~~~~~I~l~INS------pGG~v~~G-------------------laIyd~m~~~~~~V 88 (201)
T PRK14513 34 TPIESQMANTIVAQLLLLDSQNPEQEIQMYINC------PGGEVYAG-------------------LAIYDTMRYIKAPV 88 (201)
T ss_pred CEEcHHHHHHHHHHHHHhhccCCCCCEEEEEEC------CCCchhhH-------------------HHHHHHHHhcCCCE
Confidence 3588888888888888887543222 233344 34443221 22455667788899
Q ss_pred EEEEccceechhhhhhccCCe--EEEeCceEEecccccccccCCCcHHHH-----------------HhhcChH--H-HH
Q 018384 134 VAILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFY-----------------LSHLPGH--L-GE 191 (357)
Q Consensus 134 Ia~v~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~-----------------l~r~~g~--~-a~ 191 (357)
...+.|.|.+.|..|++++|- |++.+++.+.+.....|+. +..... +.+.-|. . -.
T Consensus 89 ~Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~~--G~a~di~~~a~el~~~~~~l~~iya~~Tg~~~~~I~ 166 (201)
T PRK14513 89 STICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGFR--GNTPDLEVQAKEVLFLRDTLVDIYHRHTDLPHEKLL 166 (201)
T ss_pred EEEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHH
Confidence 999999999999999999996 8999999998877765541 112211 1122232 1 34
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCC
Q 018384 192 FLALTGAKLNGAEMMACGLATHYSVSEK 219 (357)
Q Consensus 192 ~l~ltG~~i~a~eA~~~GLv~~vv~~~~ 219 (357)
+++-....++|+||+++||||+|+++..
T Consensus 167 ~~~~rd~~msa~EA~eyGliD~I~~~~~ 194 (201)
T PRK14513 167 RDMERDYFMSPEEAKAYGLIDSVIEPTR 194 (201)
T ss_pred HHhccCcccCHHHHHHcCCCcEEeccCC
Confidence 4455666799999999999999997644
No 124
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=98.12 E-value=0.00019 Score=66.20 Aligned_cols=157 Identities=12% Similarity=0.078 Sum_probs=97.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCC----CceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHH
Q 018384 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDP----NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (357)
Q Consensus 44 v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~----~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (357)
|+++-.+..=..-+++...-..+..+++.+.+|. .+.+|.|.-.| |..+.+-.. ....+.+ +
T Consensus 61 v~v~a~D~t~~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSg-----GaRlqEg~~--------~L~~~a~-i 126 (274)
T TIGR03133 61 VVVAAQEGRFQGGSVGEVHGAKIVGALRLAIEDNRKGQPTAVVLLLDTG-----GVRLQEANA--------GLIAIAE-I 126 (274)
T ss_pred EEEEEECCCccCcCCCHHHHHHHHHHHHHHHhhhhccCCCCEEEEEcCC-----CcChhhhHH--------HHHHHHH-H
Confidence 5555555544667899888999999999987622 23466665543 333322110 1111111 1
Q ss_pred HHHHHHHhcCCCcEEEEEccc--eechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChH--H-HHHHH
Q 018384 120 YSFIYLLGTHLKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH--L-GEFLA 194 (357)
Q Consensus 120 ~~l~~~i~~~~kPvIa~v~G~--a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~--~-a~~l~ 194 (357)
...+..+... +|+|+.+-|+ |+||+..++.+||++|+++++.+++. +...+....|. . ..+-.
T Consensus 127 ~~~~~~ls~~-vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~a-----------GP~VIe~~~G~e~~~~~d~~ 194 (274)
T TIGR03133 127 MRAILDARAA-VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLS-----------GPEVIEQEAGVEEFDSRDRA 194 (274)
T ss_pred HHHHHHHhCC-CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEecc-----------CHHHHHHhcCCCccCHHHhc
Confidence 1222233344 9999999999 89999999999999999998877663 12223333342 2 44444
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHH
Q 018384 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 227 (357)
Q Consensus 195 ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l 227 (357)
|.-+.+.++.....|++|.+++++. +++..++
T Consensus 195 l~~~~lGG~~~~~sG~~D~~v~dd~-~a~~~~~ 226 (274)
T TIGR03133 195 LVWRTTGGKHRFLSGDADVLVEDDV-DAFRAAV 226 (274)
T ss_pred ccccccchHhHhhcccceEEeCCHH-HHHHHHH
Confidence 5556677778888999999998644 3344433
No 125
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit. Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=98.12 E-value=0.00048 Score=62.48 Aligned_cols=156 Identities=13% Similarity=0.029 Sum_probs=93.9
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHH-HcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHH
Q 018384 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAW-ENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (357)
Q Consensus 41 ~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~-~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (357)
+|.-..|.=|+|.. .++.+-...+...+... +.+..+-+|.|.=.++ |-.|.. .+.......+
T Consensus 30 ~G~~V~vIa~~~~~--~~g~~~~~k~A~~v~~~~d~~f~~PIv~lvDtpG-~~~g~~-------------aE~~G~~~a~ 93 (238)
T TIGR03134 30 AGGKVTVIGVVPDA--EVGLDEALALAQAVLDVIEADDKRPIVVLVDTPS-QAYGRR-------------EELLGINQAL 93 (238)
T ss_pred CCEEEEEEEECCCC--cCChHHHHHHHHHHHHHHHhcCCCCEEEEEeCCC-CCCCHH-------------HHHHHHHHHH
Confidence 44445555566652 78888888888888885 5556777666654422 222221 1112222333
Q ss_pred HHHHHHHh---cCCCcEEEEEccceechhh-hhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHHHHh
Q 018384 120 YSFIYLLG---THLKPHVAILNGVTMGGGA-GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLAL 195 (357)
Q Consensus 120 ~~l~~~i~---~~~kPvIa~v~G~a~GgG~-~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~l 195 (357)
.+++..+. ..+.|+|+.|-|.++|||+ .+.+.+|.+++.+++.+ +..++-+++..+.+-... +.++.-
T Consensus 94 A~l~~a~a~a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Alp~A~i-------~vm~~e~aa~I~~~~~~~-~~e~a~ 165 (238)
T TIGR03134 94 AHLAKALALARLAGHPVIGLIYGKAISGAFLAHGLQADRIIALPGAMV-------HVMDLESMARVTKRSVEE-LEALAK 165 (238)
T ss_pred HHHHHHHHHhhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEcCCcEE-------EecCHHHHHHHHccCHhH-HHHHHH
Confidence 33444444 5569999999999999886 44445888877766654 455555555544443332 222211
Q ss_pred c--CCCCCHHHHHHcCccceecCCCCh
Q 018384 196 T--GAKLNGAEMMACGLATHYSVSEKL 220 (357)
Q Consensus 196 t--G~~i~a~eA~~~GLv~~vv~~~~l 220 (357)
+ -...+.+.+.++|+||+|+++.+-
T Consensus 166 ~~~~~a~~~~~~~~~G~vd~vi~~~~~ 192 (238)
T TIGR03134 166 SSPVFAPGIENFVKLGGVHALLDVADA 192 (238)
T ss_pred hhhhhccCHHHHHhCCCccEEeCCCCc
Confidence 1 123567789999999999987664
No 126
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=98.11 E-value=3.6e-05 Score=68.83 Aligned_cols=137 Identities=11% Similarity=0.046 Sum_probs=90.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCce--EEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcE
Q 018384 56 NALNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH 133 (357)
Q Consensus 56 Nal~~~~~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPv 133 (357)
..+|..+...+...|..++..+.-+ .|.|-+.|+...+| ..++..+...+-||
T Consensus 61 ~~Idd~~a~~i~aqLl~L~~~~~~~~I~lyINSpGGsv~aG-------------------------laIyd~m~~~~~~V 115 (221)
T PRK14514 61 TQIDDYTANTIQAQLLYLDSVDPGKDISIYINSPGGSVYAG-------------------------LGIYDTMQFISSDV 115 (221)
T ss_pred CEEcHHHHHHHHHHHHHHhccCCCCCEEEEEECCCcchhhH-------------------------HHHHHHHHhcCCCE
Confidence 3477788888888777776432212 23334444333222 12445667788999
Q ss_pred EEEEccceechhhhhhccCCe--EEEeCceEEecccccccccCCCcHHH---------------HHhhcChH--H-HHHH
Q 018384 134 VAILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPGH--L-GEFL 193 (357)
Q Consensus 134 Ia~v~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~~---------------~l~r~~g~--~-a~~l 193 (357)
.+.+.|.|.+.|..|++++|. |++.+++.|.+-...-|......-.. .+.+.-|. . ..++
T Consensus 116 ~tv~~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~ 195 (221)
T PRK14514 116 ATICTGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTIIADHSGTPFDKVWAD 195 (221)
T ss_pred EEEEEEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence 999999999999999999996 89999999888776544321111000 01122232 1 3455
Q ss_pred HhcCCCCCHHHHHHcCccceecCC
Q 018384 194 ALTGAKLNGAEMMACGLATHYSVS 217 (357)
Q Consensus 194 ~ltG~~i~a~eA~~~GLv~~vv~~ 217 (357)
+-....++|+||+++||||+|++.
T Consensus 196 ~~rd~wmtA~EA~eyGliD~Vi~~ 219 (221)
T PRK14514 196 SDRDYWMTAQEAKEYGMIDEVLIK 219 (221)
T ss_pred hhcCccCCHHHHHHcCCccEEeec
Confidence 666778999999999999999864
No 127
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.07 E-value=6.8e-05 Score=66.05 Aligned_cols=139 Identities=12% Similarity=0.033 Sum_probs=92.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018384 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (357)
Q Consensus 57 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~ 136 (357)
.+|.++..++...|..++.++..+-+.+.=+ |.|+|+..- ..++..+...+.||+..
T Consensus 33 ~i~~~~a~~ii~~Ll~l~~~~~~~~I~l~IN----SpGG~v~~g-------------------~aIyd~m~~~~~~V~t~ 89 (196)
T PRK12551 33 PVTSDSANRIVAQLLFLEAEDPEKDIYLYIN----SPGGSVYDG-------------------LGIFDTMQHVKPDVHTV 89 (196)
T ss_pred eecHHHHHHHHHHHHHhhccCCCCCEEEEEe----CCCcchhhH-------------------HHHHHHHHhcCCCEEEE
Confidence 4889999999999999885443333333221 344444321 12455566788899999
Q ss_pred EccceechhhhhhccCCe--EEEeCceEEecccccccccCCCcHHH---------------HHhhcChH--H-HHHHHhc
Q 018384 137 LNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPGH--L-GEFLALT 196 (357)
Q Consensus 137 v~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~~---------------~l~r~~g~--~-a~~l~lt 196 (357)
+.|.|.+.|..|++++|- |++.+++.|.+....-|..-...-.. .+.+.-|. . ..+++-.
T Consensus 90 ~~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~~~i~~~~~r 169 (196)
T PRK12551 90 CVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGQPLERIQEDTDR 169 (196)
T ss_pred EEEEehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhc
Confidence 999999999999999985 88999999888776533211110000 01112232 1 3445556
Q ss_pred CCCCCHHHHHHcCccceecCCC
Q 018384 197 GAKLNGAEMMACGLATHYSVSE 218 (357)
Q Consensus 197 G~~i~a~eA~~~GLv~~vv~~~ 218 (357)
...++|+||+++||||+|++..
T Consensus 170 d~~msa~EA~eyGliD~I~~~~ 191 (196)
T PRK12551 170 DFFMSPSEAVEYGLIDLVIDKR 191 (196)
T ss_pred CcCCCHHHHHHcCCCcEEeccC
Confidence 6679999999999999999764
No 128
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=97.89 E-value=0.00017 Score=65.65 Aligned_cols=98 Identities=15% Similarity=0.150 Sum_probs=77.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018384 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (357)
Q Consensus 55 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvI 134 (357)
.+.++.+...++.++++....+..+ .++|. +.|+++.. ..++...+..++.|++
T Consensus 69 ~~~I~i~dse~v~raI~~~~~~~~I-dLii~------TpGG~v~A-------------------A~~I~~~l~~~~~~v~ 122 (285)
T PF01972_consen 69 YRYIDIDDSEFVLRAIREAPKDKPI-DLIIH------TPGGLVDA-------------------AEQIARALREHPAKVT 122 (285)
T ss_pred ceeEcHhhHHHHHHHHHhcCCCCce-EEEEE------CCCCcHHH-------------------HHHHHHHHHhCCCCEE
Confidence 3678899999999999988776554 33343 34554432 1234556778999999
Q ss_pred EEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcH
Q 018384 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA 178 (357)
Q Consensus 135 a~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~ 178 (357)
+.|++.|+.+|.-++++||-+++.+++.+|--+.++|-.|..+.
T Consensus 123 v~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~si 166 (285)
T PF01972_consen 123 VIVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAASI 166 (285)
T ss_pred EEECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCChHHH
Confidence 99999999999999999999999999999999999998886543
No 129
>PRK07189 malonate decarboxylase subunit beta; Reviewed
Probab=97.89 E-value=0.00027 Score=66.04 Aligned_cols=150 Identities=13% Similarity=0.100 Sum_probs=91.4
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCC----CceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHH
Q 018384 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDP----NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (357)
Q Consensus 44 v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~----~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (357)
|+++-.+..=..-+++......+..+++.+.++. -+.+|.|.-.|+ ..+.+-. .....+. .+
T Consensus 70 v~v~a~D~tf~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSGG-----aRlqEg~--------~~L~~~a-~i 135 (301)
T PRK07189 70 VVVAAQEGRFMGGSVGEVHGAKLAGALELAAEDNRNGIPTAVLLLFETGG-----VRLQEAN--------AGLAAIA-EI 135 (301)
T ss_pred EEEEEECCCccCcCcCHHHHHHHHHHHHHHHHhCCCCCCCCEEEEecCCC-----cCccchH--------HHHHHHH-HH
Confidence 5555555555678899999999999999998765 155666665443 3332210 0011111 11
Q ss_pred HHHHHHHhcCCCcEEEEEccc--eechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChH--H-HHHHH
Q 018384 120 YSFIYLLGTHLKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH--L-GEFLA 194 (357)
Q Consensus 120 ~~l~~~i~~~~kPvIa~v~G~--a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~--~-a~~l~ 194 (357)
...+..+... +|+|+.+-|+ |+||+...+.+||++|+++++.+++. +...+....|. . ..+-.
T Consensus 136 ~~~~~~ls~~-VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~igla-----------GP~VIe~~~G~e~~d~~d~~ 203 (301)
T PRK07189 136 MRAIVDLRAA-VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLS-----------GPEVIEQEAGVEEFDSRDRA 203 (301)
T ss_pred HHHHHHHhCC-CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEecc-----------CHHHHHHhcCCcccCHHHhc
Confidence 2222233344 9999999999 99999999999999999998877663 11112222231 1 23323
Q ss_pred hcCCCCCHHHHHHcCccceecCCCC
Q 018384 195 LTGAKLNGAEMMACGLATHYSVSEK 219 (357)
Q Consensus 195 ltG~~i~a~eA~~~GLv~~vv~~~~ 219 (357)
+..+.+.+......|.+|.+++++.
T Consensus 204 ~vw~~lGG~h~~~sG~~D~~v~dd~ 228 (301)
T PRK07189 204 LVWRTTGGKHRYLSGLADALVDDDV 228 (301)
T ss_pred ccccccCcceeeecccceEEeCCHH
Confidence 3222333344556999999998654
No 130
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated
Probab=97.88 E-value=0.00072 Score=63.21 Aligned_cols=153 Identities=13% Similarity=0.104 Sum_probs=97.2
Q ss_pred EeCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHH
Q 018384 40 GKANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRT 118 (357)
Q Consensus 40 ~~~~v~~I~ln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~ 118 (357)
.+|.-..|.-|++. ...+++....+.+.++++.+... .+-+|.|.-.|+ ..+.+ + ....... ..
T Consensus 118 I~G~~V~v~a~D~~f~gGS~g~~~~eKi~r~~e~A~~~-~lPlV~l~dsgG-----armqE-------g-i~sL~~~-ak 182 (292)
T PRK05654 118 IEGMPVVLAVMDFSFMGGSMGSVVGEKIVRAVERAIEE-KCPLVIFSASGG-----ARMQE-------G-LLSLMQM-AK 182 (292)
T ss_pred ECCEEEEEEEEecccccCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCCC-----cchhh-------h-hhHHHhH-HH
Confidence 44544445555554 67899999999999999998866 477788876553 32221 0 0001111 12
Q ss_pred HHHHHHHHhcCCCcEEEEEccceechhh-hhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHHHHhcC
Q 018384 119 LYSFIYLLGTHLKPHVAILNGVTMGGGA-GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTG 197 (357)
Q Consensus 119 ~~~l~~~i~~~~kPvIa~v~G~a~GgG~-~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG 197 (357)
....+.++....+|.|+++-|+|+||+. .+++.+|++|+.+++.+++-..+ .+...++. ++ .-
T Consensus 183 ~~~a~~~~~~a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------vie~~~~e---~l--pe 246 (292)
T PRK05654 183 TSAALKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGPR-----------VIEQTVRE---KL--PE 246 (292)
T ss_pred HHHHHHHHHcCCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCHH-----------HHHhhhhh---hh--hh
Confidence 2233344566789999999999999965 46778999999988877763221 11112221 11 11
Q ss_pred CCCCHHHHHHcCccceecCCCChhHH
Q 018384 198 AKLNGAEMMACGLATHYSVSEKLPLI 223 (357)
Q Consensus 198 ~~i~a~eA~~~GLv~~vv~~~~l~~~ 223 (357)
+.=+++-+.+.|+||.|+++.++...
T Consensus 247 ~~~~ae~~~~~G~vD~Vv~~~e~r~~ 272 (292)
T PRK05654 247 GFQRAEFLLEHGAIDMIVHRRELRDT 272 (292)
T ss_pred hhcCHHHHHhCCCCcEEECHHHHHHH
Confidence 12256777899999999999887653
No 131
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=97.83 E-value=0.0006 Score=63.48 Aligned_cols=152 Identities=12% Similarity=0.110 Sum_probs=96.3
Q ss_pred EeCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHH
Q 018384 40 GKANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRT 118 (357)
Q Consensus 40 ~~~~v~~I~ln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~ 118 (357)
.+|.-..|.-+++. ..-+++....+.+..+++.+.+. .+-+|.|...|++ -+.+ + ......+ ..
T Consensus 117 I~G~~V~v~a~D~~f~gGSmg~~~geKi~r~~e~A~~~-~lPlV~l~dSgGa-----RmqE-------g-~~sL~~~-ak 181 (285)
T TIGR00515 117 LYGMPIVVAVFDFAFMGGSMGSVVGEKFVRAIEKALED-NCPLIIFSASGGA-----RMQE-------A-LLSLMQM-AK 181 (285)
T ss_pred ECCEEEEEEEEeccccCCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCCCc-----cccc-------c-hhHHHhH-HH
Confidence 34543334444443 67799999999999999998765 4677888765543 2211 1 0111111 12
Q ss_pred HHHHHHHHhcCCCcEEEEEccceechhh-hhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHHHHhcC
Q 018384 119 LYSFIYLLGTHLKPHVAILNGVTMGGGA-GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTG 197 (357)
Q Consensus 119 ~~~l~~~i~~~~kPvIa~v~G~a~GgG~-~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG 197 (357)
....+.++....+|.|+++-|+|.||+. .+++.+|++|+.+++.+++...+ .+...+|.. +.-
T Consensus 182 ~~~~~~~~~~~~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------Vie~ti~e~-----lpe 245 (285)
T TIGR00515 182 TSAALAKMSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPR-----------VIEQTVREK-----LPE 245 (285)
T ss_pred HHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHH-----------HHHHHhcCc-----cch
Confidence 2223345566789999999999999965 46679999999999888774322 122222211 111
Q ss_pred CCCCHHHHHHcCccceecCCCChhH
Q 018384 198 AKLNGAEMMACGLATHYSVSEKLPL 222 (357)
Q Consensus 198 ~~i~a~eA~~~GLv~~vv~~~~l~~ 222 (357)
+.=+++-+.+.|+||.|+++.++..
T Consensus 246 ~~q~ae~~~~~G~vD~iv~~~~~r~ 270 (285)
T TIGR00515 246 GFQTSEFLLEHGAIDMIVHRPEMKK 270 (285)
T ss_pred hcCCHHHHHhCCCCcEEECcHHHHH
Confidence 1225566788999999999988765
No 132
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification.; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.
Probab=97.74 E-value=2.8e-05 Score=66.01 Aligned_cols=94 Identities=17% Similarity=0.108 Sum_probs=58.3
Q ss_pred hcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEeccccc------------ccc---------cCCCc-----HH-
Q 018384 127 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGF---------HPDAG-----AS- 179 (357)
Q Consensus 127 ~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~------------~Gl---------~p~~g-----~~- 179 (357)
....|||||.++|.+..+|+-|+.+||-+++.+.+.++..-+. +|+ ....+ .+
T Consensus 3 ~~~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s~ 82 (154)
T PF01343_consen 3 KASGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMSE 82 (154)
T ss_dssp HHTT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--H
T ss_pred cccCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCCH
Confidence 4678999999999999999999999999999998876664332 222 11111 11
Q ss_pred ---HHHhhc-----------------ChHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 018384 180 ---FYLSHL-----------------PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 220 (357)
Q Consensus 180 ---~~l~r~-----------------~g~~a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l 220 (357)
..+.+. +.....+-+..|..+++++|++.||||++-..+++
T Consensus 83 ~~r~~~~~~l~~~~~~f~~~Va~~R~~~~~~v~~~~~~~~~~~~~A~~~GLiD~i~~~~~~ 143 (154)
T PF01343_consen 83 EERENLQELLDELYDQFVNDVAEGRGLSPDDVEEIADGGVFTAQQALELGLIDEIGTFDEA 143 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHCHHCCHEEEHHHHHHTTSSSEETSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhccccHHHHHHcCchhhcCCHHHH
Confidence 111111 11111222579999999999999999999754444
No 133
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=97.68 E-value=0.00036 Score=71.66 Aligned_cols=86 Identities=13% Similarity=-0.065 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q 018384 61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (357)
Q Consensus 61 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~ 140 (357)
-.+.++.+.|+.+..|+.|++|||.-.+ +.|.++..+ +.+.+.+..+....|||||..++.
T Consensus 76 ~~l~~i~~~i~~A~~D~~IkgIvL~i~~---~~g~~~~~~----------------~ei~~ai~~fk~sgKpVvA~~~~~ 136 (584)
T TIGR00705 76 ISLFDIVNAIRQAADDRRIEGLVFDLSN---FSGWDSPHL----------------VEIGSALSEFKDSGKPVYAYGTNY 136 (584)
T ss_pred cCHHHHHHHHHHHhcCCCceEEEEEccC---CCCCCHHHH----------------HHHHHHHHHHHhcCCeEEEEEccc
Confidence 3577999999999999999999999752 224333221 112233444556789999998877
Q ss_pred eechhhhhhccCCeEEEeCceEEecc
Q 018384 141 TMGGGAGVSIPGTFRVACGKTVFATP 166 (357)
Q Consensus 141 a~GgG~~lal~~D~~ia~~~a~f~~p 166 (357)
+ -+|+-|+.+||-+++.+.+.+++.
T Consensus 137 ~-s~~YylAs~AD~I~~~p~G~v~~~ 161 (584)
T TIGR00705 137 S-QGQYYLASFADEIILNPMGSVDLH 161 (584)
T ss_pred c-chhhhhhhhCCEEEECCCceEEee
Confidence 5 678999999999999998777553
No 134
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=97.61 E-value=0.0011 Score=61.52 Aligned_cols=149 Identities=13% Similarity=0.134 Sum_probs=91.3
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHH
Q 018384 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (357)
Q Consensus 44 v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (357)
|+++-++-.=..-++....-+.+..+++.+.... +-+|+++..|+ +.+.+-. .....+.+ ....+
T Consensus 135 v~v~a~Dftf~gGSmG~v~geKi~ra~e~A~~~r-lPlV~l~~SGG-----ARmQEg~--------~sL~qmak-~saa~ 199 (296)
T CHL00174 135 VALGVMDFQFMGGSMGSVVGEKITRLIEYATNES-LPLIIVCASGG-----ARMQEGS--------LSLMQMAK-ISSAL 199 (296)
T ss_pred EEEEEECCcccccCcCHHHHHHHHHHHHHHHHcC-CCEEEEECCCC-----ccccccc--------hhhhhhHH-HHHHH
Confidence 4545555444678899999999999999987654 67777776543 3332210 00111111 11112
Q ss_pred HH-HhcCCCcEEEEEccceechhhhh-hccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHHHHhcCCCCC
Q 018384 124 YL-LGTHLKPHVAILNGVTMGGGAGV-SIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLN 201 (357)
Q Consensus 124 ~~-i~~~~kPvIa~v~G~a~GgG~~l-al~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~i~ 201 (357)
.. ...-.+|.|+++.|+|.||+... +++||++|+.+++.+++.-.+ .+...+|.. +.-.-=+
T Consensus 200 ~~~~~~~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAGPr-----------VIe~t~ge~-----lpe~fq~ 263 (296)
T CHL00174 200 YDYQSNKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKR-----------VIEQTLNKT-----VPEGSQA 263 (296)
T ss_pred HHHHHcCCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeCHH-----------HHHHhcCCc-----CCccccc
Confidence 22 22467999999999999998755 777999999888876654211 111111211 1111124
Q ss_pred HHHHHHcCccceecCCCChhHH
Q 018384 202 GAEMMACGLATHYSVSEKLPLI 223 (357)
Q Consensus 202 a~eA~~~GLv~~vv~~~~l~~~ 223 (357)
++-.++.|+||.+|+..++.+.
T Consensus 264 ae~l~~~G~vD~iV~r~~lr~~ 285 (296)
T CHL00174 264 AEYLFDKGLFDLIVPRNLLKGV 285 (296)
T ss_pred HHHHHhCcCceEEEcHHHHHHH
Confidence 6667899999999998887643
No 135
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=97.49 E-value=0.0011 Score=58.06 Aligned_cols=97 Identities=15% Similarity=0.025 Sum_probs=64.9
Q ss_pred HHHHHhcCCCcEEEEEccceechhhhhhccCCeE--EEeCceEEecccccccccCCCcHHHH--Hh--------------
Q 018384 122 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR--VACGKTVFATPETLIGFHPDAGASFY--LS-------------- 183 (357)
Q Consensus 122 l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~--ia~~~a~f~~pe~~~Gl~p~~g~~~~--l~-------------- 183 (357)
++..+...+.||...|-|.+...|..|++++|.. ++.+++++......-|+ -+. ++-. -.
T Consensus 77 Iydtm~~ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~gg~-~G~-a~Di~i~A~ei~~~~~~l~~i~ 154 (200)
T COG0740 77 IYDTMQFIKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPSGGA-QGQ-ASDIEIHAREILKIKERLNRIY 154 (200)
T ss_pred HHHHHHhcCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCCccC-ccC-HHHHHHHHHHHHHHHHHHHHHH
Confidence 4455677899999999999999999999999885 88888877766555222 111 1110 00
Q ss_pred -hcChHH---HHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 018384 184 -HLPGHL---GEFLALTGAKLNGAEMMACGLATHYSVSEKL 220 (357)
Q Consensus 184 -r~~g~~---a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l 220 (357)
..-|.. -....-....++|+||+++||||+|.+..+.
T Consensus 155 a~~TGq~~e~i~~d~drd~~msa~eA~~yGLiD~V~~~~~~ 195 (200)
T COG0740 155 AEHTGQTLEKIEKDTDRDTWMSAEEAKEYGLIDKVIESREA 195 (200)
T ss_pred HHHcCCCHHHHHHhhcccccCCHHHHHHcCCcceecccccc
Confidence 011111 1223335556999999999999999876543
No 136
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed
Probab=97.38 E-value=0.0034 Score=56.22 Aligned_cols=143 Identities=15% Similarity=0.098 Sum_probs=90.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCce--EEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018384 57 ALNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (357)
Q Consensus 57 al~~~~~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvI 134 (357)
..+.++...+...|-.++.++..+ -+-|-+.|+...+|-=+... .....++..+...+-||.
T Consensus 48 ~~~~~~a~~iiaqLl~L~~~~~~k~I~lyINSpGGsv~~G~~iG~v----------------~~glaIyD~m~~ik~~V~ 111 (222)
T PRK12552 48 QVGMDVTELIIAQLLYLEFDDPEKPIYFYINSTGTSWYTGDAIGFE----------------TEAFAICDTMRYIKPPVH 111 (222)
T ss_pred chhHhHHHHHHHHHHHHhccCCCCCEEEEEeCCCCCcccccccccc----------------ccHHHHHHHHHhcCCCeE
Confidence 344558888888887776543222 34556666555555111100 011234556667788899
Q ss_pred EEEccceechhhhhhccCCe--EEEeCceEEecccccccccCCCcHHHHHh------------------hcChHH---HH
Q 018384 135 AILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFYLS------------------HLPGHL---GE 191 (357)
Q Consensus 135 a~v~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------r~~g~~---a~ 191 (357)
..+-|.|.+.+..|++++|- |++.++++|.+.....|.. |.+.=+. +.-|.. -.
T Consensus 112 Tv~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~---G~A~di~~~a~el~~~r~~l~~iya~~TG~~~e~I~ 188 (222)
T PRK12552 112 TICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR---GQATDIQIRAKEVLHNKRTMLEILSRNTGQTVEKLS 188 (222)
T ss_pred EEEEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc---cCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 99999999999999999995 8999999998877664431 2221111 111211 12
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCC
Q 018384 192 FLALTGAKLNGAEMMACGLATHYSVSE 218 (357)
Q Consensus 192 ~l~ltG~~i~a~eA~~~GLv~~vv~~~ 218 (357)
+++-....++|+||+++||||+|+.+.
T Consensus 189 ~d~~rd~wmsA~EA~eyGliD~Ii~~~ 215 (222)
T PRK12552 189 KDTDRMFYLTPQEAKEYGLIDRVLESR 215 (222)
T ss_pred HHhcCCCcCCHHHHHHcCCCcEEeccC
Confidence 333444569999999999999999653
No 137
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=97.38 E-value=0.007 Score=61.20 Aligned_cols=159 Identities=16% Similarity=0.122 Sum_probs=100.0
Q ss_pred CCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHH
Q 018384 42 ANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY 120 (357)
Q Consensus 42 ~~v~~I~ln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~ 120 (357)
|.-..|.-|+|. ...+++++..+...+.++.+.+. .+-+|.|.-.++ |..|.+-. .........
T Consensus 314 G~~V~vvAnd~~~~~G~~~~~~~~K~~r~i~~a~~~-~lPlV~lvDs~G-~~~g~~~E-------------~~g~~~~~a 378 (512)
T TIGR01117 314 GQSVGIIANQPKVMAGCLDIDSSDKIARFIRFCDAF-NIPIVTFVDVPG-FLPGVNQE-------------YGGIIRHGA 378 (512)
T ss_pred CEEEEEEEeccccccCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCcC-ccccHHHH-------------HHHHHHHHH
Confidence 333334445554 44579999999999999988764 466777665544 55543211 122334455
Q ss_pred HHHHHHhcCCCcEEEEEccceechhhhhhc----cCCeEEEeCceEEecccccccccCCCcHHHHH-hhcCh----HH-H
Q 018384 121 SFIYLLGTHLKPHVAILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYL-SHLPG----HL-G 190 (357)
Q Consensus 121 ~l~~~i~~~~kPvIa~v~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l-~r~~g----~~-a 190 (357)
+++.++....+|.|+.|-|.+.|||+.-.. .+|++++.+++.++. .++-++...+ .+.+. .. +
T Consensus 379 ~~~~a~~~~~vP~isvi~g~~~Gga~~am~~~~~~~d~~~a~p~a~~~v-------~~pe~a~~i~~~~~l~~~~~~~~~ 451 (512)
T TIGR01117 379 KVLYAYSEATVPKVTIITRKAYGGAYLAMCSKHLGADQVYAWPTAEIAV-------MGPAGAANIIFRKDIKEAKDPAAT 451 (512)
T ss_pred HHHHHHHhCCCCEEEEEcCCCchHHHHHhccccCCCCEEEEcCCCeEee-------cCHHHHHHHHhhhhcccccCHHHH
Confidence 677888889999999999999888654443 289988888776654 3333333222 22111 01 1
Q ss_pred HH--H-HhcCCCCCHHHHHHcCccceecCCCChhH
Q 018384 191 EF--L-ALTGAKLNGAEMMACGLATHYSVSEKLPL 222 (357)
Q Consensus 191 ~~--l-~ltG~~i~a~eA~~~GLv~~vv~~~~l~~ 222 (357)
.. + -..-+.-++..+.+.|+||.|+++.+...
T Consensus 452 ~~~~~~~~~~~~~~~~~~a~~g~vD~VI~P~~tR~ 486 (512)
T TIGR01117 452 RKQKIAEYREEFANPYKAAARGYVDDVIEPKQTRP 486 (512)
T ss_pred HHHHHHHHHHhhcCHHHHHhcCCCCeeEChHHHHH
Confidence 11 1 11223447888999999999999988764
No 138
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=97.29 E-value=0.0048 Score=59.99 Aligned_cols=148 Identities=11% Similarity=0.154 Sum_probs=106.2
Q ss_pred EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHH
Q 018384 40 GKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (357)
Q Consensus 40 ~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (357)
-++.|.+|.++ +.+++.+.+.+.+.++.++++.. .+|||.=+ .-| .+.+.+
T Consensus 24 ~~~~v~vi~i~-----g~I~~~s~~~l~r~l~~A~~~~a-~~vvl~ld----TPG-------------------Gl~~sm 74 (436)
T COG1030 24 AEKKVYVIEID-----GAIDPASADYLQRALQSAEEENA-AAVVLELD----TPG-------------------GLLDSM 74 (436)
T ss_pred cCCeEEEEEec-----CccCHHHHHHHHHHHHHHHhCCC-cEEEEEec----CCC-------------------chHHHH
Confidence 34567788886 56999999999999999997763 34444321 001 123445
Q ss_pred HHHHHHHhcCCCcEEEEEc---cceechhhhhhccCCeEEEeCceEEecccccccc---cCCCc-HHHH------HhhcC
Q 018384 120 YSFIYLLGTHLKPHVAILN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF---HPDAG-ASFY------LSHLP 186 (357)
Q Consensus 120 ~~l~~~i~~~~kPvIa~v~---G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl---~p~~g-~~~~------l~r~~ 186 (357)
.++.++|.+.|.||+..+. +.|..+|.-++++||+..+++.+.++-...-.+- .+... .... +.+.-
T Consensus 75 ~~iv~~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A~~~ 154 (436)
T COG1030 75 RQIVRAILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLAEER 154 (436)
T ss_pred HHHHHHHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHHHHc
Confidence 6688899999999988885 4699999999999999999999998876554332 11111 1111 12222
Q ss_pred hH--H-HHHHHhcCCCCCHHHHHHcCccceecC
Q 018384 187 GH--L-GEFLALTGAKLNGAEMMACGLATHYSV 216 (357)
Q Consensus 187 g~--~-a~~l~ltG~~i~a~eA~~~GLv~~vv~ 216 (357)
|+ . |.+++-....++++||++.|++|-+..
T Consensus 155 gRN~~~ae~~v~~~~~l~a~eA~~~~vid~iA~ 187 (436)
T COG1030 155 GRNPTWAERFVTENLSLTAEEALRQGVIDLIAR 187 (436)
T ss_pred CCChHHHHHHhhhccCCChhHHHhcCccccccC
Confidence 32 3 788999999999999999999998875
No 139
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=97.15 E-value=0.012 Score=59.32 Aligned_cols=139 Identities=14% Similarity=0.171 Sum_probs=91.9
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCcccccc--ChHHHHHhhccCChHHHHHHHHHHHH
Q 018384 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG--DIVSLYHFMNQGKLEECKDFFRTLYS 121 (357)
Q Consensus 44 v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~--Dl~~~~~~~~~~~~~~~~~~~~~~~~ 121 (357)
|.++-.+..-...+++......+..+++.+..+. +-+|.|.- |.|. ++.+-.. ....+.. +..
T Consensus 59 v~v~a~D~t~~gGs~g~~~~~Ki~ra~~~A~~~~-~P~v~l~d-----sgGa~~r~~eg~~--------~l~~~g~-i~~ 123 (493)
T PF01039_consen 59 VVVIAQDFTVLGGSVGEVHGEKIARAIELALENG-LPLVYLVD-----SGGAFLRMQEGVE--------SLMGMGR-IFR 123 (493)
T ss_dssp EEEEEEETTSGGGTBSHHHHHHHHHHHHHHHHHT-EEEEEEEE-----ESSBCGGGGGHHH--------HHHHHHH-HHH
T ss_pred EEEEEeccceecCCCCcccceeeehHHHHHHHcC-CCcEEecc-----ccccccccchhhh--------hhhhhHH-HHH
Confidence 4444444444678899999999999999998764 55666654 3444 4433221 1111222 222
Q ss_pred HHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCc-eEEecccccccccCCCcHHHHHhhcChHHHHHHHhcCCCC
Q 018384 122 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKL 200 (357)
Q Consensus 122 l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~i 200 (357)
-...+.. .+|+|+++.|+|.|||..++..||++|+.++ +.+++. |+...+ ..+|+.+
T Consensus 124 ~~~~~~~-~iP~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~l~--------------------GP~vv~-~~~Ge~~ 181 (493)
T PF01039_consen 124 AIARLSG-GIPQISVVTGPCTGGGAYLAALSDFVIMVKGTARIFLA--------------------GPRVVE-SATGEEV 181 (493)
T ss_dssp HHHHHHT-TS-EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------THHHHH-HHHSSCT
T ss_pred HHHHHhc-CCCeEEEEccccccchhhcccccCccccCccceEEEec--------------------cccccc-cccCccc
Confidence 2334455 9999999999999999999999999999997 776643 112111 2457888
Q ss_pred CHHHH-------HHcCccceecCCCC
Q 018384 201 NGAEM-------MACGLATHYSVSEK 219 (357)
Q Consensus 201 ~a~eA-------~~~GLv~~vv~~~~ 219 (357)
+.++. ...|.+|.++++++
T Consensus 182 ~~~~lgG~~~h~~~sG~~d~v~~de~ 207 (493)
T PF01039_consen 182 DSEELGGADVHAAKSGVVDYVVDDEE 207 (493)
T ss_dssp SHHHHHBHHHHHHTSSSSSEEESSHH
T ss_pred cchhhhhhhhhcccCCCceEEEechH
Confidence 87764 46899999998653
No 140
>PRK10949 protease 4; Provisional
Probab=97.11 E-value=0.0046 Score=63.80 Aligned_cols=86 Identities=15% Similarity=0.029 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q 018384 61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (357)
Q Consensus 61 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~ 140 (357)
-.+.++.++|+.+..|+.|++|||.-.+. .|..+..+ ..+...+..+....|||||.-+..
T Consensus 95 ~~l~div~~i~~Aa~D~rIkgivL~i~s~---gG~~~a~~----------------~eI~~ai~~fk~sGKpVvA~~~~~ 155 (618)
T PRK10949 95 NSLFDIVNTIRQAKDDRNITGIVLDLKNF---AGADQPSM----------------QYIGKALREFRDSGKPVYAVGDSY 155 (618)
T ss_pred ccHHHHHHHHHHHhcCCCceEEEEEeCCC---CCccHHHH----------------HHHHHHHHHHHHhCCeEEEEecCc
Confidence 34568999999999999999999998631 12222111 112233444556789999964444
Q ss_pred eechhhhhhccCCeEEEeCceEEecc
Q 018384 141 TMGGGAGVSIPGTFRVACGKTVFATP 166 (357)
Q Consensus 141 a~GgG~~lal~~D~~ia~~~a~f~~p 166 (357)
--+++-|+.+||-+++.+.+.+++.
T Consensus 156 -~s~~YyLASaAD~I~l~P~G~v~~~ 180 (618)
T PRK10949 156 -SQGQYYLASFANKIYLSPQGVVDLH 180 (618)
T ss_pred -cchhhhhhhhCCEEEECCCceEEEe
Confidence 4578999999999999998776543
No 141
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=96.86 E-value=0.0013 Score=60.19 Aligned_cols=89 Identities=13% Similarity=0.121 Sum_probs=65.3
Q ss_pred HHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHHHHhcCCC
Q 018384 120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAK 199 (357)
Q Consensus 120 ~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~ 199 (357)
.+-+..+.++++|+||.|=|---+||.-=...+|.+++-++++|+. +.|.++++.++..-- .+.+ +.....
T Consensus 178 A~nL~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG~AsILWkD~~--ka~e-AAe~mk 248 (317)
T COG0825 178 ARNLREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEGCASILWKDAS--KAKE-AAEAMK 248 (317)
T ss_pred HHHHHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhhhhhhhhcChh--hhHH-HHHHcC
Confidence 3445567889999999999987666654455589999999999984 467776665543322 2222 234468
Q ss_pred CCHHHHHHcCccceecCC
Q 018384 200 LNGAEMMACGLATHYSVS 217 (357)
Q Consensus 200 i~a~eA~~~GLv~~vv~~ 217 (357)
|+|++.+++|+||.|+|.
T Consensus 249 ita~dLk~lgiID~II~E 266 (317)
T COG0825 249 ITAHDLKELGIIDGIIPE 266 (317)
T ss_pred CCHHHHHhCCCcceeccC
Confidence 999999999999999975
No 142
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=96.55 E-value=0.062 Score=54.97 Aligned_cols=143 Identities=14% Similarity=0.094 Sum_probs=86.4
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHH
Q 018384 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (357)
Q Consensus 44 v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (357)
|.++-.+..=+..+++....+.+..+++.+.+.. +-+|.|.-.|+.+-.+ ....+. ....+ ..+....
T Consensus 131 V~v~a~D~tv~GGs~g~~~~~Ki~r~~elA~~~~-lPlV~l~DSgGarl~~-q~e~~~---------~~~~~-g~if~~~ 198 (569)
T PLN02820 131 CMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCR-LPCIYLVDSGGANLPR-QAEVFP---------DRDHF-GRIFYNQ 198 (569)
T ss_pred EEEEEECCCccCCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcCCcc-cccccc---------hHhHH-HHHHHHH
Confidence 3333333333678999999999999999988664 5677776554443211 000000 00011 1111122
Q ss_pred HHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCc-eEEecccccccccCCCcHHHHHhhcChHHHHHHHhcCCCCCH
Q 018384 124 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNG 202 (357)
Q Consensus 124 ~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~i~a 202 (357)
..+....+|.|+++-|+|.|||.....+||++|++++ +.+.+. |+...+ ..+|+.+++
T Consensus 199 ~~ls~~~VP~Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~~a--------------------GP~vV~-~~~Ge~v~~ 257 (569)
T PLN02820 199 ARMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFLA--------------------GPPLVK-AATGEEVSA 257 (569)
T ss_pred HHHhCCCCCEEEEEeCCCChHHHHHHHhCCceEEecCCcEEEec--------------------CHHHHH-hhcCcccCH
Confidence 2345567999999999999999999999999999874 444431 111111 145566666
Q ss_pred HHHH-------HcCccceecCCCC
Q 018384 203 AEMM-------ACGLATHYSVSEK 219 (357)
Q Consensus 203 ~eA~-------~~GLv~~vv~~~~ 219 (357)
++.- .-|.++.++++|.
T Consensus 258 eeLGGa~~h~~~sGv~d~~~~de~ 281 (569)
T PLN02820 258 EDLGGADVHCKVSGVSDHFAQDEL 281 (569)
T ss_pred HHhCCHHHhcccccccccccCchH
Confidence 6552 4788888877543
No 143
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=96.36 E-value=0.15 Score=46.57 Aligned_cols=148 Identities=14% Similarity=0.158 Sum_probs=96.6
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHH
Q 018384 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (357)
Q Consensus 44 v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (357)
|+...++-.=-..+|..-.-..+..+++.+-.+. +.+|+++.+| |.-..+-. -...+ .......+
T Consensus 124 vv~av~df~FmgGSmGsVvGeki~ra~E~A~e~k-~P~v~f~aSG-----GARMQEg~--------lSLMQ-MaktsaAl 188 (294)
T COG0777 124 VVLAVMDFAFMGGSMGSVVGEKITRAIERAIEDK-LPLVLFSASG-----GARMQEGI--------LSLMQ-MAKTSAAL 188 (294)
T ss_pred EEEEEEeccccccchhHHHHHHHHHHHHHHHHhC-CCEEEEecCc-----chhHhHHH--------HHHHH-HHHHHHHH
Confidence 4445555433456788888899999999988664 7889888754 33332210 00011 12233455
Q ss_pred HHHhcCCCcEEEEEccceechh-hhhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHHHHhcCCCCCH
Q 018384 124 YLLGTHLKPHVAILNGVTMGGG-AGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNG 202 (357)
Q Consensus 124 ~~i~~~~kPvIa~v~G~a~GgG-~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~i~a 202 (357)
.++.....|.|+.+.++..||= ..+++..|+.||.++|.+||...++ .-+.+...++. | -=++
T Consensus 189 ~~l~ea~lpyIsVLt~PTtGGVsASfA~lGDi~iAEP~AlIGFAGpRV-------IEQTire~LPe--------g-fQ~a 252 (294)
T COG0777 189 KRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPGALIGFAGPRV-------IEQTIREKLPE--------G-FQTA 252 (294)
T ss_pred HHHHhcCCceEEEecCCCccchhHhHHhccCeeecCcccccccCcchh-------hhhhhcccCCc--------c-hhhH
Confidence 6677889999999999999884 6899999999999888777653321 11111111111 1 1256
Q ss_pred HHHHHcCccceecCCCChhH
Q 018384 203 AEMMACGLATHYSVSEKLPL 222 (357)
Q Consensus 203 ~eA~~~GLv~~vv~~~~l~~ 222 (357)
+-.++.|+||.||+..++..
T Consensus 253 EfLlehG~iD~iv~R~elr~ 272 (294)
T COG0777 253 EFLLEHGMIDMIVHRDELRT 272 (294)
T ss_pred HHHHHcCCceeeecHHHHHH
Confidence 77889999999999877654
No 144
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=96.17 E-value=0.1 Score=52.81 Aligned_cols=138 Identities=15% Similarity=0.175 Sum_probs=83.0
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHH
Q 018384 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (357)
Q Consensus 44 v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (357)
|+++-.+-.=+.-+++....+.+..+++.+.++. +-+|.|.-.|+. .+.+-.. ....+.+.+...
T Consensus 84 v~v~a~D~t~~gGS~g~~~~~K~~r~~e~A~~~~-lPlV~l~dSgGa-----rm~eg~~--------~l~~~~~~~~~~- 148 (512)
T TIGR01117 84 VYAFAQDFTVMGGSLGEMHAAKIVKIMDLAMKMG-APVVGLNDSGGA-----RIQEAVD--------ALKGYGDIFYRN- 148 (512)
T ss_pred EEEEEECCcccccCCCHHHHHHHHHHHHHHHHcC-CCEEEEecCCCC-----Cccccch--------hhhhHHHHHHHH-
Confidence 4444434333678899999999999999998765 566666654433 2211000 001111111111
Q ss_pred HHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCce-EEecccccccccCCCcHHHHHhhcChHHHHHHHhcCCCCCH
Q 018384 124 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT-VFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNG 202 (357)
Q Consensus 124 ~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a-~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~i~a 202 (357)
....-.+|.|+++.|+|.||+.....+||++|+++++ .+++. +...+.. .+|+.+++
T Consensus 149 -~~~s~~iP~Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~~a-----------GP~vv~~----------~~Ge~v~~ 206 (512)
T TIGR01117 149 -TIASGVVPQISAIMGPCAGGAVYSPALTDFIYMVDNTSQMFIT-----------GPQVIKT----------VTGEEVTA 206 (512)
T ss_pred -HHHcCCCcEEEEEecCCCcHHHHHHHhcCceEEeccceEEEec-----------ChHHHHh----------hcCcccch
Confidence 1123459999999999999998887899999999964 34431 1111111 34555555
Q ss_pred HHH-------HHcCccceecCCC
Q 018384 203 AEM-------MACGLATHYSVSE 218 (357)
Q Consensus 203 ~eA-------~~~GLv~~vv~~~ 218 (357)
++. ..-|.+|.+++++
T Consensus 207 e~lGGa~~h~~~sGv~d~~~~de 229 (512)
T TIGR01117 207 EQLGGAMAHNSVSGVAHFIAEDD 229 (512)
T ss_pred hhcchHHHhccccceeEEecCCh
Confidence 554 2589999998754
No 145
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=95.43 E-value=0.13 Score=51.88 Aligned_cols=159 Identities=17% Similarity=0.180 Sum_probs=93.8
Q ss_pred CCEEEEEEcCCCCC-CCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHH
Q 018384 42 ANSRMAILNRPSAL-NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY 120 (357)
Q Consensus 42 ~~v~~I~ln~p~~~-Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~ 120 (357)
|.-.-|.-|+|... -+++++-.....+.++..+. -++-+|.|.-. ..|..|-+ .+.........
T Consensus 293 G~pVGiian~~~~~~G~~~~~~a~K~arfi~lcd~-~~iPlv~l~dt-pGf~~g~~-------------~E~~g~~~~ga 357 (493)
T PF01039_consen 293 GRPVGIIANNPRQRAGALDPDGARKAARFIRLCDA-FNIPLVTLVDT-PGFMPGPE-------------AERAGIIRAGA 357 (493)
T ss_dssp TEEEEEEEE-TTCGGGEB-HHHHHHHHHHHHHHHH-TT--EEEEEEE-CEB--SHH-------------HHHTTHHHHHH
T ss_pred CcceEEEEeccccccccCChHHHHHHHHHHHHHHh-hCCceEEEeec-ccccccch-------------hhhcchHHHHH
Confidence 33344555666422 27999999999999998886 45777777643 33444432 12223445566
Q ss_pred HHHHHHhcCCCcEEEEEccceechhhhhhccC----CeEEEeCceEEecccccccccCCCcHHHHHhhcC-------h--
Q 018384 121 SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPG----TFRVACGKTVFATPETLIGFHPDAGASFYLSHLP-------G-- 187 (357)
Q Consensus 121 ~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~----D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~-------g-- 187 (357)
+++.++..+++|+|..|-|.++|||....... |+++|.+++.++ +.++-++...+.+.- |
T Consensus 358 ~~~~a~~~~~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Awp~a~~~-------vm~~e~a~~i~~~~~~~~~~~~~~~ 430 (493)
T PF01039_consen 358 RLLYALAEATVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAWPTAEIG-------VMGPEGAASILYRDELEAAEAEGAD 430 (493)
T ss_dssp HHHHHHHHH-S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEETT-EEE-------SS-HHHHHHHHTHHHHHHSCHCCHS
T ss_pred HHHHHHHcCCCCEEEEEeCCccCcchhhhcccccchhhhhhhhcceee-------ecChhhhheeeehhhhhhhhcccch
Confidence 78889999999999999999999887555545 777777666665 443333333332211 0
Q ss_pred HHH---HHHH-hcCCCCCHHHHHHcCccceecCCCChhH
Q 018384 188 HLG---EFLA-LTGAKLNGAEMMACGLATHYSVSEKLPL 222 (357)
Q Consensus 188 ~~a---~~l~-ltG~~i~a~eA~~~GLv~~vv~~~~l~~ 222 (357)
..+ ..+- ..-..-++..+...|++|.++++.+...
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~D~ii~p~~tR~ 469 (493)
T PF01039_consen 431 PEAQRAEKIAEYEDELSSPYRAASRGYVDDIIDPAETRK 469 (493)
T ss_dssp HHHHHHHHHHHHHHHHSSHHHHHHTTSSSEESSGGGHHH
T ss_pred hHHHHHHHHHHHHHhcCCHHHHHhcCCCCCccCHHHHHH
Confidence 000 0110 0111247889999999999999888764
No 146
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=94.44 E-value=1.4 Score=45.27 Aligned_cols=144 Identities=13% Similarity=0.065 Sum_probs=92.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018384 56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 135 (357)
Q Consensus 56 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa 135 (357)
-.++.+-.....+.++..+. -++-+|-|.-.++ |..|.+-.. ....+...+++.++....+|.|+
T Consensus 380 g~l~~~~a~Kaarfi~lc~~-~~iPlv~l~D~pG-f~~G~~~E~-------------~G~~~~~a~l~~A~a~~~VP~is 444 (569)
T PLN02820 380 GILFTESALKGAHFIELCAQ-RGIPLLFLQNITG-FMVGSRSEA-------------SGIAKAGAKMVMAVACAKVPKIT 444 (569)
T ss_pred CccCHHHHHHHHHHHHHHHh-cCCCEEEEEECCC-CCCCHHHHH-------------hhHHHHHHHHHHHHHhCCCCEEE
Confidence 45888888888888888775 4566666654422 555543221 23455667788889999999999
Q ss_pred EEccceechhhhhhc----cCCeEEEeCceEEecccccccccCCCcHHHHHhhc-C------------hHH-H-HH-H-H
Q 018384 136 ILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-P------------GHL-G-EF-L-A 194 (357)
Q Consensus 136 ~v~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~-~------------g~~-a-~~-l-~ 194 (357)
+|=|.++|+|..-.+ ..|++++.+++ .+|..++-++.-.+.+. + -.. + .+ + -
T Consensus 445 vi~g~a~G~g~~aM~g~~~~~d~~~awp~A-------~i~vmg~e~aa~il~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (569)
T PLN02820 445 IIVGGSFGAGNYGMCGRAYSPNFLFMWPNA-------RIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKTVE 517 (569)
T ss_pred EEECCcchHHHHHhcCcCCCCCEEEECCCC-------eEEecCHHHHHHHHHHHHhhhhhhccccCCccHHHHHHHHHHH
Confidence 999999998765444 45666666555 55555555555444431 1 100 0 00 0 1
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChh
Q 018384 195 LTGAKLNGAEMMACGLATHYSVSEKLP 221 (357)
Q Consensus 195 ltG~~i~a~eA~~~GLv~~vv~~~~l~ 221 (357)
..-+..++-.|-+.|+||.|+++.+-.
T Consensus 518 ~~~~~~~p~~aa~~~~vD~VIdP~dTR 544 (569)
T PLN02820 518 AYEREANPYYSTARLWDDGVIDPADTR 544 (569)
T ss_pred HHHHhCCHHHHHHcCCcCcccCHHHHH
Confidence 112245677788999999999886654
No 147
>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones]
Probab=94.32 E-value=0.19 Score=45.42 Aligned_cols=132 Identities=14% Similarity=0.091 Sum_probs=73.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018384 56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 135 (357)
Q Consensus 56 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa 135 (357)
-.++.++-+.+..-|-.++.+++-|-+.+.=+ |.|+++..- ..++..+..++-||-.
T Consensus 99 ~~Idd~va~~viaqlL~Ld~ed~~K~I~lyIN----SPGG~vtag-------------------lAIYDtMq~ik~~V~T 155 (275)
T KOG0840|consen 99 QPIDDDVANLVIAQLLYLDSEDPKKPIYLYIN----SPGGSVTAG-------------------LAIYDTMQYIKPDVST 155 (275)
T ss_pred CcCcHHHHHHHHHHHHHhhccCCCCCeEEEEe----CCCCccchh-------------------hhHHHHHHhhCCCcee
Confidence 34788888888888888887666665555433 334333210 1133344455556555
Q ss_pred EEccceechhhhhhccCCeEEEeCceEEeccccccccc-CCCcHHHHHhhcChHHHHHH------------HhcC-----
Q 018384 136 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFH-PDAGASFYLSHLPGHLGEFL------------ALTG----- 197 (357)
Q Consensus 136 ~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~-p~~g~~~~l~r~~g~~a~~l------------~ltG----- 197 (357)
.+=|.|.+-|.-|..+ .+.+-++++|..++=+. |.+|..-- ..=+-.+|+++ --||
T Consensus 156 ic~G~Aas~aalLLaa-----G~KG~R~alPnsriMIhQP~gga~Gq-a~Di~i~akE~~~~k~~l~~i~a~~Tgq~~e~ 229 (275)
T KOG0840|consen 156 ICVGLAASMAALLLAA-----GAKGKRYALPNSRIMIHQPSGGAGGQ-ATDIVIQAKELMRIKEYLNEIYAKHTGQPLEV 229 (275)
T ss_pred eehhhHHhHHHHHHhc-----CCCcceeecCCceeEEeccCCCcCcc-chHHHHHHHHHHHHHHHHHHHHHHhcCCcHHH
Confidence 5567777666544433 24566677777776663 33321100 00000001111 1244
Q ss_pred --------CCCCHHHHHHcCccceecC
Q 018384 198 --------AKLNGAEMMACGLATHYSV 216 (357)
Q Consensus 198 --------~~i~a~eA~~~GLv~~vv~ 216 (357)
+.++|+||++.||||+|++
T Consensus 230 i~~d~dRd~fmsa~EA~eyGliD~v~~ 256 (275)
T KOG0840|consen 230 IEKDMDRDRFMSAEEAKEYGLIDKVID 256 (275)
T ss_pred HHhhhcccccCCHHHHHHhcchhhhhc
Confidence 4589999999999999985
No 148
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=92.64 E-value=0.53 Score=47.34 Aligned_cols=102 Identities=11% Similarity=0.018 Sum_probs=64.7
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHH
Q 018384 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (357)
Q Consensus 44 v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (357)
+.++--+.+-+.-++.+-....+..+.+.+.++..-.+.+..| .|..+.+=.. ....+ ..+..-.
T Consensus 93 ~~v~a~D~TV~gGt~~~~~~~Ki~r~~~~A~~~g~P~i~l~ds------gGari~~~v~--------~l~g~-g~iF~~~ 157 (526)
T COG4799 93 VFVFANDFTVKGGTLGEMTAKKILRAQELAIENGLPVIGLNDS------GGARIQEGVP--------SLAGY-GRIFYRN 157 (526)
T ss_pred EEEEEecCceecccccccccchHHHHHHHHHHcCCCEEEEEcc------cccccccCcc--------ccccc-hHHHHHH
Confidence 3333334455788888888888888888888765434444443 3333322110 00111 1111112
Q ss_pred HHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCce
Q 018384 124 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 161 (357)
Q Consensus 124 ~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a 161 (357)
.++... +|.|++|-|.|.|||.-+...||++|+.++.
T Consensus 158 a~~Sg~-IPqIsvv~G~c~gGgaY~pal~D~~imv~~~ 194 (526)
T COG4799 158 ARASGV-IPQISVVMGPCAGGGAYSPALTDFVIMVRDQ 194 (526)
T ss_pred HHhccC-CCEEEEEEecCcccccccccccceEEEEcCC
Confidence 233444 9999999999999999999999999999984
No 149
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=90.75 E-value=0.47 Score=46.60 Aligned_cols=59 Identities=14% Similarity=0.095 Sum_probs=47.5
Q ss_pred HHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe---eccC
Q 018384 293 STLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ---ILNK 355 (357)
Q Consensus 293 ~~a~~l~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egi~af---l~~r 355 (357)
+.+++++..+|.++..+|+.++.. .......+..|...+...+. ++|++|++++| +++|
T Consensus 228 ~~~~~i~~~~p~av~~~k~~~~~~-~~~~~~~l~~~~~~i~~~f~---~~d~~ei~~al~~~~~kr 289 (401)
T PLN02157 228 EQLKKLLTDDPSVVESCLEKCAEV-AHPEKTGVIRRIDLLEKCFS---HDTVEEIIDSLEIEAGRR 289 (401)
T ss_pred HHHHHHHcCCHHHHHHHHHHHhcc-cCCcchhHHHHHHHHHHHhc---CCCHHHHHHHHHhhhccc
Confidence 457788888999999999999865 23466777778888878776 99999999999 6544
No 150
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=76.54 E-value=9.9 Score=34.69 Aligned_cols=133 Identities=11% Similarity=0.026 Sum_probs=80.5
Q ss_pred ccceechhhhhhccC-CeEEEeCceEEecccccccccCCCcHH-----HHHhhcChHH-HHHHHhcCCCCCHHHHHHcCc
Q 018384 138 NGVTMGGGAGVSIPG-TFRVACGKTVFATPETLIGFHPDAGAS-----FYLSHLPGHL-GEFLALTGAKLNGAEMMACGL 210 (357)
Q Consensus 138 ~G~a~GgG~~lal~~-D~~ia~~~a~f~~pe~~~Gl~p~~g~~-----~~l~r~~g~~-a~~l~ltG~~i~a~eA~~~GL 210 (357)
-|..+...+.+..++ |-+++.+.+.++++....-+..-.|.. .+..+.+... |.++-+--+.++.++..+
T Consensus 108 gG~~Lal~cD~ria~~~a~f~~pe~~~G~~g~~~~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~--- 184 (249)
T PRK07938 108 GGIGLVGNADVIVASDDATFGLPEVDRGALGAATHLQRLVPQHLMRALFFTAATITAAELHHFGSVEEVVPRDQLDE--- 184 (249)
T ss_pred hHHHHHHhCCEEEEeCCCEeeCccceecCchhHHHHHHhcCHHHHHHHHHhCCcCCHHHHHHCCCccEEeCHHHHHH---
Confidence 355566666666665 556777788888763222121112221 1234556666 888888888888766542
Q ss_pred cceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHHHHHHHHc-CCCCHHHHHHHHhcccC
Q 018384 211 ATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCF-GLDTVEEIIDSLESEAS 284 (357)
Q Consensus 211 v~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~e~i~~~l~~~~~ 284 (357)
...+.++.+ +..+|.++...|+.++...... ..........+..++ +.+..+++.++++|+.|
T Consensus 185 --------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~eg~~af~ekr~p 249 (249)
T PRK07938 185 --------AALEVARKI---AAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELNLAGVSDEHRDAFVEKRKA 249 (249)
T ss_pred --------HHHHHHHHH---HhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhcCccHHHHHHHHHhcCCC
Confidence 233345544 4568899999999887543322 223333455566677 56778888888888743
No 151
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=72.65 E-value=29 Score=35.22 Aligned_cols=153 Identities=17% Similarity=0.157 Sum_probs=92.0
Q ss_pred EEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHH
Q 018384 47 AILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 125 (357)
Q Consensus 47 I~ln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 125 (357)
|.=|.|. ....|+.+--..-.+.++..+ -.++-.|.|.-. ..|..|-|-.. ....+...+++.+
T Consensus 328 iIANqp~~~~G~l~~~sa~KaArFI~~cd-~~~iPlv~L~d~-pGFm~G~~~E~-------------~giik~Gakl~~A 392 (526)
T COG4799 328 IIANQPRHLGGVLDIDSADKAARFIRLCD-AFNIPLVFLVDT-PGFMPGTDQEY-------------GGIIKHGAKLLYA 392 (526)
T ss_pred EEecCccccccccchHHHHHHHHHHHhhh-ccCCCeEEEeCC-CCCCCChhHHh-------------ChHHHhhhHHHhh
Confidence 4456665 455899999888888884444 345666666533 56888865432 2344555678899
Q ss_pred HhcCCCcEEEEEccceechhhhhhc----cCCeEEEeCceEEecccccccccCCCcHHHHHhh-cChHH-H--H------
Q 018384 126 LGTHLKPHVAILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL-G--E------ 191 (357)
Q Consensus 126 i~~~~kPvIa~v~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r-~~g~~-a--~------ 191 (357)
+....+|.|..|-|.++|||...+. .+|+.+|. |..++|+.-+-|+.-.+.+ .+... . .
T Consensus 393 ~aeatVPkitvI~rkayGga~~~M~~~~~~~~~~~Aw-------P~a~iaVMG~egAv~i~~~k~l~~~~~~~~~~~~~~ 465 (526)
T COG4799 393 VAEATVPKITVITRKAYGGAYYVMGGKALGPDFNYAW-------PTAEIAVMGPEGAVSILYRKELAAAERPEEREALLR 465 (526)
T ss_pred HhhccCCeEEEEecccccceeeeecCccCCCceeEec-------CcceeeecCHHHHHHHHHHHHhhcccCchhHHHHHH
Confidence 9999999999999999999864433 35555555 5555555333333333332 21110 0 0
Q ss_pred ---HHHhcCCCCCHHHHHHcCccceecCCCChh
Q 018384 192 ---FLALTGAKLNGAEMMACGLATHYSVSEKLP 221 (357)
Q Consensus 192 ---~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~ 221 (357)
.--+.-+-.++--|.+.|++|.|+++.+..
T Consensus 466 ~~~~~eY~~~~~~p~~aa~r~~iD~vI~p~~tR 498 (526)
T COG4799 466 KQLIAEYEEQFSNPYYAAERGYIDAVIDPADTR 498 (526)
T ss_pred HHHHHHHHHhccchHHHHHhCCCCcccCHHHHH
Confidence 001112223455566788888888775543
No 152
>KOG0540 consensus 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta [Amino acid transport and metabolism; Lipid transport and metabolism]
Probab=70.60 E-value=40 Score=33.44 Aligned_cols=148 Identities=15% Similarity=0.115 Sum_probs=95.7
Q ss_pred EEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHH
Q 018384 47 AILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 125 (357)
Q Consensus 47 I~ln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 125 (357)
|.-|+|+ ....|..+.-....+.++...+ ..+-.|.|...++ |-.|.+..... ....-..++.+
T Consensus 353 Ivgnn~kf~~G~L~s~sa~KgarfIe~c~q-~~IPLi~l~ni~G-fm~g~~~e~~g-------------IaK~gAklv~a 417 (536)
T KOG0540|consen 353 IVGNNPKFAGGVLFSESAVKGARFIELCDQ-RNIPLIFLQNITG-FMVGRAAEAGG-------------IAKHGAKLVYA 417 (536)
T ss_pred EeccCchhcccccchhhhhhhHHHHHHHHh-cCCcEEEEEccCC-ccccchhhhhc-------------hhhhhhhhhhh
Confidence 5556665 4456776766666666665554 4577777777655 88888765321 22333457788
Q ss_pred HhcCCCcEEEEEccceechhhh---hhccCCeEEEeCceEEecccccccccCCCcHHHHHhhc-----ChH--HHHHHHh
Q 018384 126 LGTHLKPHVAILNGVTMGGGAG---VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-----PGH--LGEFLAL 195 (357)
Q Consensus 126 i~~~~kPvIa~v~G~a~GgG~~---lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~-----~g~--~a~~l~l 195 (357)
.....+|-|..+-|.++||-.. -.++-|+.++.++|.+++-..+ ++.-.+.+. ... ...+.+
T Consensus 418 ~a~akvpkITiit~~syGG~y~m~sr~~~gd~~yawP~A~IavmG~~-------~a~~Vi~q~~~e~a~~~~~~~~E~f- 489 (536)
T KOG0540|consen 418 VACAKVPKITIITGGSYGGNYAMCSRGYSGDINYAWPNARIAVMGGK-------QAANVIFQITLEKAVALKAPYIEKF- 489 (536)
T ss_pred hhhccCceEEEEecCccCCcccccccccCCceeEEcccceeeecccc-------chhhhhhhhhhhhhhhhcchHHHHh-
Confidence 8889999999999999997554 5677889888888877654331 222222222 222 223332
Q ss_pred cCCCCCHHHHHHcCccceecCCCChh
Q 018384 196 TGAKLNGAEMMACGLATHYSVSEKLP 221 (357)
Q Consensus 196 tG~~i~a~eA~~~GLv~~vv~~~~l~ 221 (357)
|.++. |...|++|.++++.+..
T Consensus 490 -~npy~---a~~Rg~~D~II~p~~tR 511 (536)
T KOG0540|consen 490 -GNPYY---AAARGWDDGIIDPSDTR 511 (536)
T ss_pred -cCccH---HHHhhccccccChhHhh
Confidence 66665 46789999999887654
No 153
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.
Probab=70.02 E-value=9 Score=38.11 Aligned_cols=80 Identities=6% Similarity=-0.010 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q 018384 59 NTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILN 138 (357)
Q Consensus 59 ~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~ 138 (357)
......++..+++.+...+++-+|||.=.|+++- ||..|. + ..+.++++.+|.|||++|-
T Consensus 168 G~~a~~~i~~al~~~~~~~~~dviii~RGGGs~e---DL~~Fn---------------~--e~~~rai~~~~~Pvis~iG 227 (432)
T TIGR00237 168 GEGAVQSIVESIELANTKNECDVLIVGRGGGSLE---DLWSFN---------------D--EKVARAIFLSKIPIISAVG 227 (432)
T ss_pred CccHHHHHHHHHHHhhcCCCCCEEEEecCCCCHH---HhhhcC---------------c--HHHHHHHHcCCCCEEEecC
Confidence 3455677777787777655566666654333221 332221 1 3477889999999999762
Q ss_pred cceechhhhhhccCCeEEEeCc
Q 018384 139 GVTMGGGAGVSIPGTFRVACGK 160 (357)
Q Consensus 139 G~a~GgG~~lal~~D~~ia~~~ 160 (357)
|-.-- .-.=+.+|.|..|+.
T Consensus 228 -He~D~-ti~D~vAd~ra~TPt 247 (432)
T TIGR00237 228 -HETDF-TISDFVADLRAPTPS 247 (432)
T ss_pred -cCCCc-cHHHHhhhccCCCcH
Confidence 21110 112245666666553
No 154
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=69.40 E-value=9.8 Score=36.02 Aligned_cols=79 Identities=8% Similarity=0.102 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHcCC---CceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018384 60 TNMGAKLNKLFKAWENDP---NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (357)
Q Consensus 60 ~~~~~~L~~~l~~~~~d~---~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~ 136 (357)
.....++..+|+.+...+ .+-+|||.=.|+++ -||..|.. ..+.++|..+|.|||++
T Consensus 54 ~~A~~~I~~al~~~~~~~~~~~~Dviii~RGGGs~---eDL~~FN~-----------------e~varai~~~~~Pvisa 113 (319)
T PF02601_consen 54 EGAAASIVSALRKANEMGQADDFDVIIIIRGGGSI---EDLWAFND-----------------EEVARAIAASPIPVISA 113 (319)
T ss_pred cchHHHHHHHHHHHHhccccccccEEEEecCCCCh---HHhcccCh-----------------HHHHHHHHhCCCCEEEe
Confidence 345677778888887654 45556554332221 13322211 34778899999999997
Q ss_pred EccceechhhhhhccCCeEEEeCc
Q 018384 137 LNGVTMGGGAGVSIPGTFRVACGK 160 (357)
Q Consensus 137 v~G~a~GgG~~lal~~D~~ia~~~ 160 (357)
| ||-.-- .-.=+.||+|..|+.
T Consensus 114 I-GHe~D~-ti~D~vAd~ra~TPt 135 (319)
T PF02601_consen 114 I-GHETDF-TIADFVADLRAPTPT 135 (319)
T ss_pred c-CCCCCc-hHHHHHHHhhCCCHH
Confidence 6 222111 122234666655554
No 155
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=67.77 E-value=19 Score=33.46 Aligned_cols=74 Identities=26% Similarity=0.345 Sum_probs=48.9
Q ss_pred EeCCEEEEEEcCCCCCCCCCHHHHHHHH-----------------------HHHHHHHcCCCceEEEEecCCCccccccC
Q 018384 40 GKANSRMAILNRPSALNALNTNMGAKLN-----------------------KLFKAWENDPNIGFVSMKGSGRAFCAGGD 96 (357)
Q Consensus 40 ~~~~v~~I~ln~p~~~Nal~~~~~~~L~-----------------------~~l~~~~~d~~v~~vvl~g~g~~F~~G~D 96 (357)
..++|.+|. +...|+-++..+|. ++|..+++||+.++||+-|.- |.+
T Consensus 144 ~~G~IGiVS-----rSGTLTyE~~~qlt~~G~GqS~~IGiGGDpi~Gt~fid~L~~fe~Dp~T~~ivmiGEi-----GG~ 213 (293)
T COG0074 144 KPGNIGIVS-----RSGTLTYEAVSQLTEAGLGQSTAIGIGGDPIPGTSFIDALEMFEADPETEAIVMIGEI-----GGP 213 (293)
T ss_pred cCCceEEEe-----cCcchHHHHHHHHHhcCCceEEEEEeCCCCcCCccHHHHHHHHhcCccccEEEEEecC-----CCc
Confidence 367777654 23567888877776 778888999999999999861 111
Q ss_pred hHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q 018384 97 IVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 142 (357)
Q Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~ 142 (357)
- .+...++ +.. ...+||||+.+-|.+.
T Consensus 214 a-----------Ee~AA~~-------i~~-~~~~KPVVa~iaG~ta 240 (293)
T COG0074 214 A-----------EEEAAEY-------IKA-NATRKPVVAYIAGRTA 240 (293)
T ss_pred H-----------HHHHHHH-------HHH-hccCCCEEEEEeccCC
Confidence 1 1222222 222 2345999999999865
No 156
>PF13607 Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin domain; PDB: 2CSU_A.
Probab=64.79 E-value=19 Score=29.84 Aligned_cols=51 Identities=20% Similarity=0.305 Sum_probs=27.3
Q ss_pred HHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q 018384 65 KLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (357)
Q Consensus 65 ~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~ 140 (357)
.+.+.++.+..||++++|++.-++ + .+. +.+.+..++.... ||||+..-|.
T Consensus 41 ~~~d~l~~~~~D~~t~~I~ly~E~--~---------------~d~-------~~f~~~~~~a~~~-KPVv~lk~Gr 91 (138)
T PF13607_consen 41 DFADLLEYLAEDPDTRVIVLYLEG--I---------------GDG-------RRFLEAARRAARR-KPVVVLKAGR 91 (138)
T ss_dssp -HHHHHHHHCT-SS--EEEEEES-------------------S-H-------HHHHHHHHHHCCC-S-EEEEE---
T ss_pred CHHHHHHHHhcCCCCCEEEEEccC--C---------------CCH-------HHHHHHHHHHhcC-CCEEEEeCCC
Confidence 467788888999999999998763 0 011 1222344455555 9999999887
No 157
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=63.17 E-value=19 Score=34.56 Aligned_cols=158 Identities=12% Similarity=0.045 Sum_probs=88.7
Q ss_pred hcCCCcEEEEEccceechhhhhhccC-CeEEEeCceEEecccccccc--cCCCcHH-----HHHhhcChHH-HHHHHhcC
Q 018384 127 GTHLKPHVAILNGVTMGGGAGVSIPG-TFRVACGKTVFATPETLIGF--HPDAGAS-----FYLSHLPGHL-GEFLALTG 197 (357)
Q Consensus 127 ~~~~kPvIa~v~G~a~GgG~~lal~~-D~~ia~~~a~f~~pe~~~Gl--~p~~g~~-----~~l~r~~g~~-a~~l~ltG 197 (357)
....-+.++. |..+...+.+.+++ |-+++.+.+.+|++...-|. .|-.++. .+..+.++.. |.++-+--
T Consensus 105 AaVnG~a~Gg--G~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g~~a~~llltG~~i~A~eA~~~GLv~ 182 (342)
T PRK05617 105 ALMDGIVMGG--GVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGALGTYLALTGARISAADALYAGLAD 182 (342)
T ss_pred EEEcCEEEcc--HhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhcccHHHHHHHHcCCCCCHHHHHHcCCcc
Confidence 3444444443 56666677777765 55677788888885322121 2332221 1122445555 77777777
Q ss_pred CCCCHHHHHHc------------------------------------CccceecCCCChhHH-----------HH-HHHh
Q 018384 198 AKLNGAEMMAC------------------------------------GLATHYSVSEKLPLI-----------EE-ELGK 229 (357)
Q Consensus 198 ~~i~a~eA~~~------------------------------------GLv~~vv~~~~l~~~-----------~~-~l~~ 229 (357)
+.++.++.... ..+++++....+.++ +. .+.+
T Consensus 183 ~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~a~~~a~~ 262 (342)
T PRK05617 183 HFVPSADLPALLDALISLRWDSGADVVDAALAAFATPAPASELAAQRAWIDECFAGDTVEDIIAALEADGGEFAAKTADT 262 (342)
T ss_pred eecCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHHhccHHHHHHHHHH
Confidence 88887765432 112222222222211 22 3367
Q ss_pred hhcCCHHHHHHHHHHhhccCCC-ChhhHHHHHHHHHHHc-CCCCHHHHHHHH-hc-ccCCC
Q 018384 230 LVTDDPSVIEACLEKYSDLVYP-DKNSVIHRIDIVDKCF-GLDTVEEIIDSL-ES-EASLI 286 (357)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~e~i~~~l-~~-~~~~~ 286 (357)
+...+|.+++..|+.++..... .......+...+..++ +.+..+++.+++ +| +.|++
T Consensus 263 i~~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~egv~afl~ek~r~p~~ 323 (342)
T PRK05617 263 LRSRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAMLRSPDFVEGVRAVLIDKDRNPKW 323 (342)
T ss_pred HHhCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCchhhccceEEEcCCCCCCC
Confidence 7888999999999988754432 2333444556666777 566677777775 65 65543
No 158
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=62.30 E-value=25 Score=33.04 Aligned_cols=91 Identities=8% Similarity=-0.091 Sum_probs=62.6
Q ss_pred HhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCC--CChhhHHH
Q 018384 182 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVY--PDKNSVIH 258 (357)
Q Consensus 182 l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 258 (357)
..+.++.. |.++-|-.+.++.++... ...+.++.+ +..+|.++...|+.++.... +.......
T Consensus 176 tg~~i~A~eA~~~GLV~~vv~~~~l~~-----------~a~~~a~~l---a~~~p~a~~~~K~~l~~~~~~~~l~~~~~~ 241 (298)
T PRK12478 176 TGRPLTGVQAAEAELINEAVPFERLEA-----------RVAEVATEL---ARIPLSQLQAQKLIVNQAYENMGLASTQTL 241 (298)
T ss_pred cCCccCHHHHHHcCCcceecCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHHHHhcchhHHHHH
Confidence 34566666 899988889998887664 244456655 45689999999988875432 23344455
Q ss_pred HHHHHHHHcCCCCH---------HHHHHHHhcccCCC
Q 018384 259 RIDIVDKCFGLDTV---------EEIIDSLESEASLI 286 (357)
Q Consensus 259 ~~~~~~~~~~~~~~---------e~i~~~l~~~~~~~ 286 (357)
....+..++..++. |++.++++||.|.+
T Consensus 242 e~~~~~~~~~s~d~~e~~~~~~~egv~Af~ekR~p~f 278 (298)
T PRK12478 242 GGILDGLMRNTPDALEFIRTAETQGVRAAVERRDGPF 278 (298)
T ss_pred HHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 56677777865554 58899999997754
No 159
>PLN02921 naphthoate synthase
Probab=61.07 E-value=30 Score=33.03 Aligned_cols=92 Identities=11% Similarity=0.007 Sum_probs=60.8
Q ss_pred HHhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHH
Q 018384 181 YLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHR 259 (357)
Q Consensus 181 ~l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (357)
+..+.+... |.++-+--+.++.++..+ ...+.++.+ +..+|.++...|+.++.............
T Consensus 227 ltG~~~~A~eA~~~GLV~~vv~~~~l~~-----------~a~~~a~~l---a~~~p~al~~~K~~l~~~~~~~~~~~~~~ 292 (327)
T PLN02921 227 FLARFYTASEALKMGLVNTVVPLDELEG-----------ETVKWCREI---LRNSPTAIRVLKSALNAADDGHAGLQELG 292 (327)
T ss_pred HcCCcCCHHHHHHCCCceEEeCHHHHHH-----------HHHHHHHHH---HccCHHHHHHHHHHHHHhhcchhHHHHHH
Confidence 344556666 888888888888877653 334455655 45688899988888865433222222222
Q ss_pred HHHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 260 IDIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 260 ~~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
...+..++ +.+..|++.++++|+.|.+
T Consensus 293 ~~~~~~~~~s~d~~egi~Af~ekr~p~f 320 (327)
T PLN02921 293 GNATLLFYGSEEGNEGRTAYLEGRAPDF 320 (327)
T ss_pred HHHHHHHhcCHHHHHHHHHHhccCCCCC
Confidence 35566666 5788888889999987764
No 160
>smart00250 PLEC Plectin repeat.
Probab=59.54 E-value=7.5 Score=24.31 Aligned_cols=19 Identities=37% Similarity=0.396 Sum_probs=17.3
Q ss_pred hcCCCCCHHHHHHcCccce
Q 018384 195 LTGAKLNGAEMMACGLATH 213 (357)
Q Consensus 195 ltG~~i~a~eA~~~GLv~~ 213 (357)
.||++++-.||++.||++.
T Consensus 17 ~t~~~lsv~eA~~~glid~ 35 (38)
T smart00250 17 ETGQKLSVEEALRRGLIDP 35 (38)
T ss_pred CCCCCcCHHHHHHcCCCCc
Confidence 3899999999999999985
No 161
>PF00549 Ligase_CoA: CoA-ligase; InterPro: IPR005811 This entry represents a domain found in both the alpha and beta chains of succinyl-CoA synthase (6.2.1.4 from EC (GDP-forming) and 6.2.1.5 from EC (ADP-forming)) [, ]. This domain can also be found in ATP citrate synthase (2.3.3.8 from EC) and malate-CoA ligase (6.2.1.9 from EC). Some members of the domain utilise ATP others use GTP.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3DMY_B 3MWE_B 3PFF_A 3MWD_B 2YV1_A 1EUC_A 2FP4_A 1EUD_A 2FPI_A 2FPG_A ....
Probab=59.24 E-value=20 Score=30.24 Aligned_cols=62 Identities=15% Similarity=0.127 Sum_probs=35.6
Q ss_pred HHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceec
Q 018384 65 KLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMG 143 (357)
Q Consensus 65 ~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~G 143 (357)
...++|....+||++++|++-+.+++=+. .+ ....+...+..... ...++|+|+.+-|...-
T Consensus 60 ~~~~~l~~~~~Dp~v~vIlvd~~~G~g~~----~~-----------~A~~l~~a~~~~~~--~~~~~pvVa~v~GT~~d 121 (153)
T PF00549_consen 60 TRNEALEIEAADPEVKVILVDIVGGIGSC----ED-----------PAAGLIPAIKEAKA--EGRKKPVVARVCGTNAD 121 (153)
T ss_dssp HHHHHHHHHHTSTTESEEEEEEESSSSSH----HH-----------HHHHHHHHHSHCTH--TTT-SEEEEEEESTTCH
T ss_pred HHHHHHHHHhcCCCccEEEEEeccccCch----HH-----------HHHHHHHHHHhccc--cCCCCcEEEEeeeecCC
Confidence 34557788889999999999976432221 11 11111111111100 34789999999987654
No 162
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=58.36 E-value=28 Score=33.13 Aligned_cols=53 Identities=25% Similarity=0.387 Sum_probs=31.3
Q ss_pred HHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q 018384 66 LNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 142 (357)
Q Consensus 66 L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~ 142 (357)
+.+.|+.+.+||+.++|++.+++. |. ..+...+|... ....||||+.+-|..-
T Consensus 212 ~~D~L~~~~~Dp~T~~Ivl~~E~g----G~------------~e~~aa~fi~~--------~~~~KPVVa~~aGrsa 264 (317)
T PTZ00187 212 FIDCLKLFLNDPETEGIILIGEIG----GT------------AEEEAAEWIKN--------NPIKKPVVSFIAGITA 264 (317)
T ss_pred HHHHHHHHhhCCCccEEEEEEecC----Cc------------hhHHHHHHHHh--------hcCCCcEEEEEecCCC
Confidence 446677777778888888777521 00 01122223221 2468999999988753
No 163
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=56.86 E-value=41 Score=31.12 Aligned_cols=143 Identities=10% Similarity=0.093 Sum_probs=84.8
Q ss_pred cCCCcEEEEEccceechhhhhhccC-CeEEEeCceEEecccccccc---cCCC-cHH-----HHHhhcChHH-HHHHHhc
Q 018384 128 THLKPHVAILNGVTMGGGAGVSIPG-TFRVACGKTVFATPETLIGF---HPDA-GAS-----FYLSHLPGHL-GEFLALT 196 (357)
Q Consensus 128 ~~~kPvIa~v~G~a~GgG~~lal~~-D~~ia~~~a~f~~pe~~~Gl---~p~~-g~~-----~~l~r~~g~~-a~~l~lt 196 (357)
...-+.++ -|..+...+.+..++ |-+++.+...++++....|. +|.. |.. .+..+.+... |.++-+-
T Consensus 115 av~G~a~G--gG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~A~~l~l~g~~~~a~eA~~~Glv 192 (276)
T PRK05864 115 AVNGPAIG--GGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDVDAEEAERIGLV 192 (276)
T ss_pred EECCEeeh--hHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhhhCHHHHHHHHHcCCccCHHHHHHcCCc
Confidence 34444443 366677778777776 45778888889988655553 3432 221 1233445555 7888777
Q ss_pred CCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCC-Chh-hHHHHHH--HHHHHcCCCCH
Q 018384 197 GAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKN-SVIHRID--IVDKCFGLDTV 272 (357)
Q Consensus 197 G~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~--~~~~~~~~~~~ 272 (357)
.+.++.++..+ ...+.++.+ +..+|.++...|+.++..... ... ....+.. .+..+.+.+..
T Consensus 193 ~~vv~~~~l~~-----------~a~~~a~~l---a~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~d~~ 258 (276)
T PRK05864 193 SRQVPDEQLLD-----------TCYAIAARM---AGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFVRLLTANFE 258 (276)
T ss_pred ceeeCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhccChhHH
Confidence 78888776543 233455544 456888998888887654321 111 1111111 22322367788
Q ss_pred HHHHHHHhcccCCC
Q 018384 273 EEIIDSLESEASLI 286 (357)
Q Consensus 273 e~i~~~l~~~~~~~ 286 (357)
+++.++++|+.|.+
T Consensus 259 e~~~af~~kr~p~~ 272 (276)
T PRK05864 259 EAVAARAEKRPPVF 272 (276)
T ss_pred HHHHHHhccCCCCC
Confidence 88888899987654
No 164
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=55.24 E-value=33 Score=31.38 Aligned_cols=89 Identities=9% Similarity=-0.098 Sum_probs=56.8
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDI 262 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (357)
+.+... |.++-+-.+.++.++..+. ..+.++.+ +..+|.++...|+.++................
T Consensus 166 ~~~~a~eA~~~Glv~~vv~~~~l~~~-----------a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~e~~~ 231 (259)
T TIGR01929 166 RQYDAEQALDMGLVNTVVPLADLEKE-----------TVRWCREI---LQKSPMAIRMLKAALNADCDGQAGLQELAGNA 231 (259)
T ss_pred CccCHHHHHHcCCcccccCHHHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHhhhccchHHHHHHHHH
Confidence 445555 8888888888887765532 33445544 45688888888888765433222222223355
Q ss_pred HHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 263 VDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 263 ~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
+..++ +.+..+++.++++|+.|.+
T Consensus 232 ~~~~~~~~d~~egi~af~~kr~p~~ 256 (259)
T TIGR01929 232 TMLFYMTEEGQEGRNAFLEKRQPDF 256 (259)
T ss_pred HHHHhcCccHHHHHHHHhccCCCCC
Confidence 66666 5677888888899987653
No 165
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=54.47 E-value=25 Score=32.09 Aligned_cols=91 Identities=13% Similarity=0.112 Sum_probs=58.4
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 261 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 261 (357)
+.+... |.++-+-.+.++.++..+. ..+.++.+ +..+|.++...|+.++...... .........
T Consensus 161 ~~~~a~eA~~~Glv~~vv~~~~l~~~-----------a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 226 (255)
T PRK08150 161 RVYDAQEGERLGLAQYLVPAGEALDK-----------AMELARRI---AQNAPLTNFAVLNALPRIADMSADDGLFVESL 226 (255)
T ss_pred CcCCHHHHHHcCCccEeeCchHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 455555 8888888888887665422 23345444 5568888888888887543322 222333344
Q ss_pred HHHHHc-CCCCHHHHHHHHhcccCCCCC
Q 018384 262 IVDKCF-GLDTVEEIIDSLESEASLIND 288 (357)
Q Consensus 262 ~~~~~~-~~~~~e~i~~~l~~~~~~~~~ 288 (357)
.+..++ +.+..+++.++++|+.|.+.+
T Consensus 227 ~~~~~~~s~d~~eg~~af~~kr~p~~~~ 254 (255)
T PRK08150 227 MAAVAQSAPEAKERLRAFLEKKAAKVKP 254 (255)
T ss_pred HHHHHhcCHHHHHHHHHHhccCCCCCCC
Confidence 556666 467788888889998887654
No 166
>PLN02600 enoyl-CoA hydratase
Probab=52.95 E-value=27 Score=31.85 Aligned_cols=90 Identities=12% Similarity=0.110 Sum_probs=59.5
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRI 260 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 260 (357)
.+.+... |.++-+-.+.++.++..+ ...+.++.+ +..+|.++...|+.++...... ......+.
T Consensus 156 g~~~~a~eA~~~Glv~~vv~~~~~~~-----------~a~~~a~~l---a~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~ 221 (251)
T PLN02600 156 GRRIGAREAASMGLVNYCVPAGEAYE-----------KALELAQEI---NQKGPLAIKMAKKAINEGSEVDMASGLEIEE 221 (251)
T ss_pred CCccCHHHHHHcCCCcEeeChhHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 3455555 888877778888776553 233355544 5578899999998887554322 23334445
Q ss_pred HHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 261 DIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 261 ~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
..+..++ +.+..+++.++++|+.|.+
T Consensus 222 ~~~~~~~~~~d~~eg~~af~ekr~p~~ 248 (251)
T PLN02600 222 ECYEQVLKTKDRLEGLAAFAEKRKPVY 248 (251)
T ss_pred HHHHHHhCCHHHHHHHHHHhcCCCCCC
Confidence 5677777 5677888888899987654
No 167
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=52.44 E-value=31 Score=31.59 Aligned_cols=90 Identities=13% Similarity=0.086 Sum_probs=58.9
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRI 260 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 260 (357)
.+.+... |.++-+-.+.++.++..+ ...+.++.+ +..+|.++...|+.++...... ......+.
T Consensus 167 g~~~~a~eA~~~Glv~~v~~~~~l~~-----------~~~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~ 232 (262)
T PRK07468 167 ARLFDAEEAVRLGLLSRVVPAERLDA-----------AVEAEVTPY---LSCAPGAVAAAKALVRALGAPIDEAVIDATI 232 (262)
T ss_pred CCccCHHHHHHcCCcceecCHHHHHH-----------HHHHHHHHH---HhcCHHHHHHHHHHHHhhhccChHHHHHHHH
Confidence 3555656 888888888888765432 233445544 4468889988888876543322 33344455
Q ss_pred HHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 261 DIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 261 ~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
..+..+| +.+..+++.++++|+.|.+
T Consensus 233 ~~~~~~~~s~d~~e~~~af~~kr~~~~ 259 (262)
T PRK07468 233 EALADTWETEEAREGIAAFFDKRAPAW 259 (262)
T ss_pred HHHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 6777777 4677777888899987654
No 168
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=51.46 E-value=73 Score=29.03 Aligned_cols=88 Identities=10% Similarity=0.101 Sum_probs=57.9
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCC-CChhhHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVY-PDKNSVIHRID 261 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 261 (357)
+.+... |.++-+-.+.++.++..+ ...+.++.+ +..+|.++...|+.++.... +.......+..
T Consensus 169 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---a~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~ 234 (260)
T PRK05980 169 DAFSAERALEIGLVNAVVPHEELLP-----------AARALARRI---IRHSPVAVAAILTAVTRGLNLSIAEGLLIESE 234 (260)
T ss_pred CccCHHHHHHcCCCCcccCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 445555 888888888888776553 234455544 45678888888887765433 22333444556
Q ss_pred HHHHHc-CCCCHHHHHHHHhcccCC
Q 018384 262 IVDKCF-GLDTVEEIIDSLESEASL 285 (357)
Q Consensus 262 ~~~~~~-~~~~~e~i~~~l~~~~~~ 285 (357)
.+..++ +.+..+++.++++|+.|.
T Consensus 235 ~~~~~~~~~~~~e~~~af~~kr~p~ 259 (260)
T PRK05980 235 QFARMAGSADLREGLAAWIERRRPA 259 (260)
T ss_pred HHHHHhcChhHHHHHHHHhccCCCC
Confidence 677777 567788888888888653
No 169
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=50.91 E-value=5 Score=26.20 Aligned_cols=19 Identities=32% Similarity=0.408 Sum_probs=16.4
Q ss_pred hcCCCCCHHHHHHcCccce
Q 018384 195 LTGAKLNGAEMMACGLATH 213 (357)
Q Consensus 195 ltG~~i~a~eA~~~GLv~~ 213 (357)
-||++++-++|++.||+|.
T Consensus 17 ~tg~~lsv~~A~~~glId~ 35 (45)
T PF00681_consen 17 ETGERLSVEEAIQRGLIDS 35 (45)
T ss_dssp TTTEEEEHHHHHHTTSS-H
T ss_pred CCCeEEcHHHHHHCCCcCH
Confidence 4889999999999999986
No 170
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=50.56 E-value=34 Score=31.67 Aligned_cols=89 Identities=8% Similarity=0.015 Sum_probs=58.4
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 261 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 261 (357)
+.+... |.++-+-.+.++.++..+ ...+.+..+ +..+|.++...|+.++...... ......+..
T Consensus 183 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~ 248 (277)
T PRK08258 183 RSMSAEEGERWGFFNRLVEPEELLA-----------EAQALARRL---AAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQ 248 (277)
T ss_pred CCCCHHHHHHcCCCcEecCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhccCCHHHHHHHHHH
Confidence 445555 888877778777665442 233445444 5568999999999887654332 333444556
Q ss_pred HHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 262 IVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 262 ~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
.+..++ +.+..+++.++++|+.|.+
T Consensus 249 ~~~~~~~s~d~~eg~~af~ekr~p~~ 274 (277)
T PRK08258 249 AQAICMQTEDFRRAYEAFVAKRKPVF 274 (277)
T ss_pred HHHHHhcCchHHHHHHHHhcCCCCCC
Confidence 677777 5677788888899987654
No 171
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=50.49 E-value=44 Score=30.55 Aligned_cols=134 Identities=9% Similarity=0.079 Sum_probs=82.3
Q ss_pred EEEccceechhhhhhccC-CeEEEeCceEEeccccccc-ccCCC-cHH-----HHHhhcChHH-HHHHHhcCCCCCHHHH
Q 018384 135 AILNGVTMGGGAGVSIPG-TFRVACGKTVFATPETLIG-FHPDA-GAS-----FYLSHLPGHL-GEFLALTGAKLNGAEM 205 (357)
Q Consensus 135 a~v~G~a~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G-l~p~~-g~~-----~~l~r~~g~~-a~~l~ltG~~i~a~eA 205 (357)
|.--|..+...|.+.+++ |-+++.+...+++|..... +.|.. |.. .+..+.+... |.++-+--+.++.++.
T Consensus 111 a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~p~~~~~~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l 190 (256)
T PRK06143 111 CLGGGLELAAACDLRIAAHDAQFGMPEVRVGIPSVIHAALLPRLIGWARTRWLLLTGETIDAAQALAWGLVDRVVPLAEL 190 (256)
T ss_pred EeehhHHHHHhCCEEEecCCCEEeCCccccCCCCccHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHHCCCcCeecCHHHH
Confidence 333455677777777776 4678888889998754211 12322 221 1233456666 8888888888887764
Q ss_pred HHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCC-ChhhHHHHHHHHHHHcC-CCCHHHHHHHHhcc
Q 018384 206 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIHRIDIVDKCFG-LDTVEEIIDSLESE 282 (357)
Q Consensus 206 ~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~e~i~~~l~~~ 282 (357)
. +...+.++.+ +..+|.++...|+.++..... ...........+..+|. .+..+++.++++|+
T Consensus 191 ~-----------~~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~e~~~af~ekr 255 (256)
T PRK06143 191 D-----------AAVERLAASL---AGCGPQALRQQKRLLREWEDMPLDVAIDDSVAEFGAAFLTGEPQRHMAAFLNRK 255 (256)
T ss_pred H-----------HHHHHHHHHH---HcCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhcChHHHHHHHHHHhhc
Confidence 3 2334455554 456888999898888764332 23334444556677774 56677777777765
No 172
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=49.13 E-value=29 Score=31.38 Aligned_cols=145 Identities=11% Similarity=-0.001 Sum_probs=80.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCce--EEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCc
Q 018384 55 LNALNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKP 132 (357)
Q Consensus 55 ~Nal~~~~~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP 132 (357)
...+..+.-..|..++.+.-.+..-+ ++|+-..|..++-- .|+. -...+.......+..-....-|
T Consensus 40 ~~~vGl~ea~~lA~~V~~~i~~~~krpIv~lVD~~sQa~grr---eEll---------Gi~~alAhla~a~a~AR~~GHp 107 (234)
T PF06833_consen 40 HGEVGLEEAWALAKAVLDTIRSGPKRPIVALVDVPSQAYGRR---EELL---------GINQALAHLAKAYALARLAGHP 107 (234)
T ss_pred CCcccHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCccccchH---HHHh---------hHHHHHHHHHHHHHHHHHcCCC
Confidence 57888888888887776554332223 33333333333220 1111 1122333344455556678899
Q ss_pred EEEEEccceechhh-hhhccCCeEEEeCceEEecccccccccCCCcHHHHHhhcChHHHHHHHhcCCC--CCHHHHHHcC
Q 018384 133 HVAILNGVTMGGGA-GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAK--LNGAEMMACG 209 (357)
Q Consensus 133 vIa~v~G~a~GgG~-~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~--i~a~eA~~~G 209 (357)
||+.|-|.+++||| .-.+.+|..|+-+++.+ -..+-. +..+..++.=..-.++.-+--+ ++.+--.++|
T Consensus 108 vI~Lv~G~A~SGaFLA~GlqA~rl~AL~ga~i-------~vM~~~-s~ARVTk~~ve~Le~la~s~PvfA~gi~ny~~lG 179 (234)
T PF06833_consen 108 VIGLVYGKAMSGAFLAHGLQANRLIALPGAMI-------HVMGKP-SAARVTKRPVEELEELAKSVPVFAPGIENYAKLG 179 (234)
T ss_pred eEEEEecccccHHHHHHHHHhcchhcCCCCee-------ecCChH-HhHHHhhcCHHHHHHHhhcCCCcCCCHHHHHHhc
Confidence 99999999999997 67788888877663332 222211 2233333322112333322222 4556667899
Q ss_pred ccceecCCCC
Q 018384 210 LATHYSVSEK 219 (357)
Q Consensus 210 Lv~~vv~~~~ 219 (357)
.++++++.+.
T Consensus 180 ~l~~l~~~~~ 189 (234)
T PF06833_consen 180 ALDELWDGDL 189 (234)
T ss_pred cHHHHhcccc
Confidence 9999987444
No 173
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=48.73 E-value=41 Score=30.74 Aligned_cols=89 Identities=13% Similarity=0.116 Sum_probs=58.1
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCC-ChhhHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIHRID 261 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 261 (357)
+.+... |.++-+--+.++.++..+ ...+.++.+ +..+|.++...|+.++..... .......+..
T Consensus 164 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 229 (258)
T PRK09076 164 ERVDAATALRIGLVEEVVEKGEARE-----------AALALAQKV---ANQSPSAVAACKTLIQAARNGPRAAALALERE 229 (258)
T ss_pred CcCCHHHHHHCCCCceecCchhHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 455555 888888888888776543 234455544 456888998888888654332 2333444455
Q ss_pred HHHHHcC-CCCHHHHHHHHhcccCCC
Q 018384 262 IVDKCFG-LDTVEEIIDSLESEASLI 286 (357)
Q Consensus 262 ~~~~~~~-~~~~e~i~~~l~~~~~~~ 286 (357)
.+..++. .+..+++.++++|+.|.+
T Consensus 230 ~~~~~~~~~~~~eg~~af~~kr~p~~ 255 (258)
T PRK09076 230 LFVDLFDTEDQREGVNAFLEKRAPQW 255 (258)
T ss_pred HHHHHhcCchHHHHHHHHhcCCCCCC
Confidence 6777774 677778888899887654
No 174
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=48.72 E-value=66 Score=24.50 Aligned_cols=50 Identities=8% Similarity=0.017 Sum_probs=35.7
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC
Q 018384 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG 88 (357)
Q Consensus 34 ~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g 88 (357)
-.+.++..+++.+|++..+ ++.+....+.+.+..+..++..+.|++--.+
T Consensus 3 ~~i~~~~~~~~~vi~~~G~-----l~~~~~~~~~~~l~~~~~~~~~~~vvidls~ 52 (108)
T TIGR00377 3 LNIETEVQEGVVIVRLSGE-----LDAHTAPLLREKVTPAAERTGPRPIVLDLED 52 (108)
T ss_pred eEEEEEEECCEEEEEEecc-----cccccHHHHHHHHHHHHHhcCCCeEEEECCC
Confidence 3577888899999999853 5555566677777666554567788887766
No 175
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=48.34 E-value=36 Score=30.91 Aligned_cols=64 Identities=13% Similarity=-0.032 Sum_probs=41.8
Q ss_pred hhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHHHHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 220 LPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 220 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
..+.++.+ +..+|.++...|+.++...... ..........+..++ +.+..+++.++++|+.|.+
T Consensus 180 a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~eg~~af~~kr~p~~ 245 (248)
T PRK06072 180 AEEMANRI---SNGPFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLGKTEDFKEGISSFKEKREPKF 245 (248)
T ss_pred HHHHHHHH---HhCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhCChhHHHHHHHHhcCCCCCC
Confidence 44556655 4568889988888887543322 223333455667777 5677888888899987654
No 176
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=47.64 E-value=42 Score=30.37 Aligned_cols=84 Identities=11% Similarity=0.053 Sum_probs=49.7
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDI 262 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (357)
+.+... |.++-+-.+....+++ .+.++.+ +..+|.++...|+.++.. .........+...
T Consensus 155 ~~~~a~eA~~~Glv~~v~~~~~a---------------~~~a~~l---~~~~~~a~~~~K~~l~~~-~~~~~~~~~e~~~ 215 (243)
T PRK07854 155 EKLTAEQALATGMANRIGTLADA---------------QAWAAEI---AGLAPLALQHAKRVLNDD-GAIEEAWPAHKEL 215 (243)
T ss_pred CCcCHHHHHHCCCcccccCHHHH---------------HHHHHHH---HhCCHHHHHHHHHHHHcc-CCHHHHHHHHHHH
Confidence 445555 7777666555433222 2233333 456888888888888654 2222233334556
Q ss_pred HHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 263 VDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 263 ~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
+..+| +.+..+++.++++|+.|.+
T Consensus 216 ~~~~~~~~d~~eg~~af~~kr~p~~ 240 (243)
T PRK07854 216 FDKAWASQDAIEAQVARIEKRPPKF 240 (243)
T ss_pred HHHHhcCchHHHHHHHHhCCCCCCC
Confidence 67777 4667777888888886643
No 177
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=47.52 E-value=41 Score=31.01 Aligned_cols=91 Identities=11% Similarity=0.071 Sum_probs=59.2
Q ss_pred HhhcChHH-HHHHHhcCCCCCH-HHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCC-ChhhHHH
Q 018384 182 LSHLPGHL-GEFLALTGAKLNG-AEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIH 258 (357)
Q Consensus 182 l~r~~g~~-a~~l~ltG~~i~a-~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 258 (357)
..+.+... |.++-+-.+.++. ++..+ ...+.++.+ +..+|.++...|+.++..... .......
T Consensus 176 ~g~~~~a~eA~~~GLv~~vv~~~~~l~~-----------~a~~~a~~i---a~~~~~a~~~~K~~l~~~~~~~l~~~~~~ 241 (272)
T PRK06142 176 TGRDIDAAEAEKIGLVNRVYDDADALLA-----------AAHATAREI---AAKSPLAVRGTKEVLDYMRDHRVADGLRY 241 (272)
T ss_pred hCCCcCHHHHHHcCCccEecCCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHhhcCCHHHHHHH
Confidence 33456666 8888888888874 55442 234455555 456889999999988754332 2233344
Q ss_pred HHHHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 259 RIDIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 259 ~~~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
.......++ +.+..+++.++++|+.|++
T Consensus 242 ~~~~~~~~~~~~d~~egv~af~~kr~p~~ 270 (272)
T PRK06142 242 VATWNAAMLPSKDLTEAIAAHMEKRPPEF 270 (272)
T ss_pred HHHHHHHHhcCccHHHHHHHHhcCCCCCC
Confidence 455666777 5678888888899887653
No 178
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=46.69 E-value=46 Score=30.30 Aligned_cols=89 Identities=15% Similarity=0.077 Sum_probs=56.8
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 261 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 261 (357)
+.++.. |.++-+-.+.++.++..+ +..+.++.+ +..+|.++...|+.++...... .........
T Consensus 161 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---a~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~ 226 (255)
T PRK06563 161 DEFDAQEALRLGLVQEVVPPGEQLE-----------RAIELAERI---ARAAPLGVQATLASARAAVREGEAAAAAQLPP 226 (255)
T ss_pred CCcCHHHHHHcCCCcEeeCHHHHHH-----------HHHHHHHHH---HhcCHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Confidence 455656 888888888888766531 223345444 4568888888888876543322 222333455
Q ss_pred HHHHHcC-CCCHHHHHHHHhcccCCC
Q 018384 262 IVDKCFG-LDTVEEIIDSLESEASLI 286 (357)
Q Consensus 262 ~~~~~~~-~~~~e~i~~~l~~~~~~~ 286 (357)
.+..+++ .+..+++.++++|+.|.+
T Consensus 227 ~~~~~~~~~d~~eg~~af~~kr~p~~ 252 (255)
T PRK06563 227 ELRPLFTSEDAKEGVQAFLERRPARF 252 (255)
T ss_pred HHHHHhcCchHHHHHHHHhcCCCCCC
Confidence 6777774 666777888899987654
No 179
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=46.61 E-value=32 Score=34.22 Aligned_cols=78 Identities=8% Similarity=0.073 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q 018384 60 TNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNG 139 (357)
Q Consensus 60 ~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G 139 (357)
.....++..+|+.+.... +-+|||.=.|+++ -||..|.. ..+.++++.+|.|||++| |
T Consensus 175 ~~A~~~i~~al~~~~~~~-~Dviii~RGGGS~---eDL~~Fn~-----------------e~v~~ai~~~~~Pvis~I-G 232 (438)
T PRK00286 175 EGAAASIVAAIERANARG-EDVLIVARGGGSL---EDLWAFND-----------------EAVARAIAASRIPVISAV-G 232 (438)
T ss_pred ccHHHHHHHHHHHhcCCC-CCEEEEecCCCCH---HHhhccCc-----------------HHHHHHHHcCCCCEEEec-c
Confidence 345677777777776533 3444443222221 13332211 347788999999999976 2
Q ss_pred ceechhhhhhccCCeEEEeCc
Q 018384 140 VTMGGGAGVSIPGTFRVACGK 160 (357)
Q Consensus 140 ~a~GgG~~lal~~D~~ia~~~ 160 (357)
|-.-- .-.=+.||.|..|+.
T Consensus 233 HE~D~-tl~D~vAd~ra~TPt 252 (438)
T PRK00286 233 HETDF-TIADFVADLRAPTPT 252 (438)
T ss_pred CCCCc-cHHHHhhhccCCChH
Confidence 21110 122345666666653
No 180
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=46.61 E-value=41 Score=30.78 Aligned_cols=88 Identities=13% Similarity=0.039 Sum_probs=54.8
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 261 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 261 (357)
+.++.. |.++-+-.+.+ .++..+ ...+.++.+ +..+|.++...|+.++...... ......+..
T Consensus 167 ~~~~a~eA~~~Glv~~vv-~~~~~~-----------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~ 231 (260)
T PRK07659 167 KKLSATEALDLGLIDEVI-GGDFQT-----------AAKQKISEW---LQKPLKAMIETKQIYCELNRSQLEQVLQLEKR 231 (260)
T ss_pred CccCHHHHHHcCChHHHh-hhHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence 455555 77776666666 444332 233445444 4568899999998887543322 233334455
Q ss_pred HHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 262 IVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 262 ~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
.+..++ +.+..+++.++++|+.|.+
T Consensus 232 ~~~~~~~~~~~~egi~af~~kr~p~~ 257 (260)
T PRK07659 232 AQYAMRQTADHKEGIRAFLEKRLPVF 257 (260)
T ss_pred HHHHHhcCHhHHHHHHHHhcCCCCCC
Confidence 666667 5677888888999987654
No 181
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=46.18 E-value=50 Score=30.06 Aligned_cols=88 Identities=15% Similarity=0.094 Sum_probs=50.8
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhh-HH-HHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VI-HRI 260 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~ 260 (357)
+.+... |.++-+--+.++..+. ..+...++.+ +..+|.++...|+.++......... .. .+.
T Consensus 157 ~~~~a~eA~~~Glv~~v~~~~~~------------~a~~~~a~~l---a~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~ 221 (251)
T TIGR03189 157 RSIDGAEGARIGLANAVAEDPEN------------AALAWFDEHP---AKLSASSLRFAVRAARLGMNERVKAKIAEVEA 221 (251)
T ss_pred CCCCHHHHHHCCCcceecCcHHH------------HHHHHHHHHH---HhCCHHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 445555 7777666666653221 1222123333 3457888888888876543322221 21 234
Q ss_pred HHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 261 DIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 261 ~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
..+..++ +.+..+++.++++|+.|.+
T Consensus 222 ~~~~~~~~s~d~~eg~~af~ekr~p~~ 248 (251)
T TIGR03189 222 LYLEELMATHDAVEGLNAFLEKRPALW 248 (251)
T ss_pred HHHHHHhCCHhHHHHHHHHHhcCCCCC
Confidence 4566677 4677888888999987654
No 182
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=46.16 E-value=38 Score=33.63 Aligned_cols=57 Identities=11% Similarity=0.165 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018384 61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (357)
Q Consensus 61 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v 137 (357)
.--.++.++++.++..+++.++|+.=. |+-+.++ ..|.+ ..+.++++.++.|||++|
T Consensus 176 ~A~~eIv~aI~~an~~~~~DvlIVaRG------GGSiEDL------------W~FNd--E~vaRAi~~s~iPvISAV 232 (440)
T COG1570 176 GAAEEIVEAIERANQRGDVDVLIVARG------GGSIEDL------------WAFND--EIVARAIAASRIPVISAV 232 (440)
T ss_pred CcHHHHHHHHHHhhccCCCCEEEEecC------cchHHHH------------hccCh--HHHHHHHHhCCCCeEeec
Confidence 345677777777777776766666432 2223322 22222 247789999999999986
No 183
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=46.12 E-value=48 Score=30.23 Aligned_cols=89 Identities=10% Similarity=0.041 Sum_probs=56.6
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID 261 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (357)
.+.++.. |.++-+--+.++.++..+. ..+.++.+ +..+|.++...|+.++...............
T Consensus 162 g~~~~a~eA~~~Glv~~vv~~~~l~~~-----------a~~~a~~i---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~ 227 (256)
T TIGR03210 162 CRRYTAQEALAMGLVNAVVPHDQLDAE-----------VQKWCDEI---VEKSPTAIAIAKRSFNMDTAHQRGIAGMGMY 227 (256)
T ss_pred CCCcCHHHHHHcCCceeeeCHHHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHHhhcccchHHHHHHH
Confidence 4556666 8888888888887765532 34455555 4557888888888876543221111111234
Q ss_pred HHHHHc-CCCCHHHHHHHHhcccCC
Q 018384 262 IVDKCF-GLDTVEEIIDSLESEASL 285 (357)
Q Consensus 262 ~~~~~~-~~~~~e~i~~~l~~~~~~ 285 (357)
.+..++ +.+..+++.++++|+.|.
T Consensus 228 ~~~~~~~~~d~~e~~~af~~kr~p~ 252 (256)
T TIGR03210 228 ALKLYYDTAESREGVKAFQEKRKPE 252 (256)
T ss_pred HHHHHccChhHHHHHHHHhccCCCC
Confidence 566677 567788888889998664
No 184
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=45.77 E-value=88 Score=28.45 Aligned_cols=90 Identities=11% Similarity=0.089 Sum_probs=58.0
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRI 260 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 260 (357)
.+.++.. |.++-+-.+.++.++..+ ...+.++.+ +..+|.++...|+.++...... ......+.
T Consensus 159 g~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~ 224 (254)
T PRK08252 159 GDMLTAERAHELGLVNRLTEPGQALD-----------AALELAERI---AANGPLAVAASKRIVVESGDWSEDEMFARQR 224 (254)
T ss_pred CCccCHHHHHHcCCcceecCcchHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 3455656 888888888887766543 234455555 4568889999998887654322 22233344
Q ss_pred HHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 261 DIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 261 ~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
..+..++ +.+..+++.++++|+.|.+
T Consensus 225 ~~~~~~~~~~~~~eg~~af~~kr~p~~ 251 (254)
T PRK08252 225 ELIAPVFTSADAKEGATAFAEKRAPVW 251 (254)
T ss_pred HHHHHHhcCchHHHHHHHHhcCCCCCC
Confidence 5566666 5677778888888876643
No 185
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=45.68 E-value=2.6e+02 Score=26.12 Aligned_cols=134 Identities=12% Similarity=0.062 Sum_probs=74.8
Q ss_pred CCCceEEEEeCCE--------EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecC-CCccccccChHHH-H
Q 018384 32 LCNQVLVEGKANS--------RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-GRAFCAGGDIVSL-Y 101 (357)
Q Consensus 32 ~~~~i~~~~~~~v--------~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~-g~~F~~G~Dl~~~-~ 101 (357)
+++.|.+-.+|.+ -++.|+.. .|-+|...+..+.+++.+.--.+.-++-||-|. .+.|.---|-... .
T Consensus 109 ~fDlvivp~HD~~~~~s~~~~Nilpi~Gs--~h~Vt~~~lAa~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~ 186 (329)
T COG3660 109 HFDLVIVPYHDWREELSDQGPNILPINGS--PHNVTSQRLAALREAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFA 186 (329)
T ss_pred cceEEeccchhhhhhhhccCCceeeccCC--CCcccHHHhhhhHHHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHH
Confidence 4666666666554 35666665 478999999999999998865555555555554 4888765554321 1
Q ss_pred Hhh----ccCChHHHHHHHHHHHHHHHHH-h-cCCCcEEEEEccc--eechhhhhhccCCeEEEeCceEEeccc
Q 018384 102 HFM----NQGKLEECKDFFRTLYSFIYLL-G-THLKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPE 167 (357)
Q Consensus 102 ~~~----~~~~~~~~~~~~~~~~~l~~~i-~-~~~kPvIa~v~G~--a~GgG~~lal~~D~~ia~~~a~f~~pe 167 (357)
... ..........+.++.-.....+ . +.+--.+...|+- -..--+.+..++|++|++.++.=...|
T Consensus 187 ~~l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaDSinM~sE 260 (329)
T COG3660 187 SLLVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTADSINMCSE 260 (329)
T ss_pred HHHHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecchhhhhHH
Confidence 110 0000000000111111111111 1 2455557778877 344457888899999999876433333
No 186
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=45.59 E-value=42 Score=30.59 Aligned_cols=87 Identities=10% Similarity=-0.052 Sum_probs=50.9
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDI 262 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (357)
+.+... |.++-+-.+.++..+.. +. ++ ++ ++...+|.++...|+.+.................
T Consensus 164 ~~~~a~eA~~~Glv~~vv~~~~~~----~~------~~---a~---~l~~~~p~a~~~~K~~~~~~~~~~~~~~~~e~~~ 227 (255)
T PRK07112 164 QPVTAQQAFSWGLVDAYGANSDTL----LR------KH---LL---RLRCLNKAAVARYKSYASTLDDTVAAARPAALAA 227 (255)
T ss_pred CcccHHHHHHcCCCceecCcHHHH----HH------HH---HH---HHHhCCHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 445555 77777777776644421 11 12 22 2345678888888887764322222233334455
Q ss_pred HHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 263 VDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 263 ~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
...++ +.+..+++-++++|+.|.+
T Consensus 228 ~~~~~~~~~~~eg~~af~~kr~p~~ 252 (255)
T PRK07112 228 NIEMFADPENLRKIARYVETGKFPW 252 (255)
T ss_pred HHHHHcChHHHHHHHHHHcCCCCCC
Confidence 66676 5677778888899886644
No 187
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=44.98 E-value=1.2e+02 Score=27.72 Aligned_cols=91 Identities=12% Similarity=0.051 Sum_probs=57.4
Q ss_pred HhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCCh-hhHHHH
Q 018384 182 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDK-NSVIHR 259 (357)
Q Consensus 182 l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 259 (357)
..+.+... |.++-+--+.++.++..+ ...+.++.+ +..+|.++...|+.++....... ......
T Consensus 161 ~g~~~~a~eA~~~GLv~~vv~~~~l~~-----------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e 226 (259)
T PRK06494 161 TGRRVTAREGLELGFVNEVVPAGELLA-----------AAERWADDI---LACSPLSIRASKQAVYRGLEVSLEEAITAQ 226 (259)
T ss_pred cCCcCCHHHHHHcCCCcEecCHhHHHH-----------HHHHHHHHH---HhcCHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 33455666 888888888888776554 234455554 45688999989888875433222 222222
Q ss_pred --HHHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 260 --IDIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 260 --~~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
...+..++ +.+..+++.++++|+.|.+
T Consensus 227 ~~~~~~~~~~~~~d~~eg~~af~~kr~p~~ 256 (259)
T PRK06494 227 RDYPAVEARRASQDYIEGPKAFAEKRPPRW 256 (259)
T ss_pred HHHHHHHHHhcCccHHHHHHHHHccCCCCC
Confidence 23456677 4677777878888876643
No 188
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=44.92 E-value=46 Score=30.42 Aligned_cols=62 Identities=10% Similarity=0.072 Sum_probs=39.9
Q ss_pred HHHHHHHhhhcCCHHHHHHHHHHhhccCCC-ChhhHHHHHHHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 222 LIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIHRIDIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 222 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
+.++.+ +..+|.++...|+.++..... .......+...+..++ +.+..+++.++++|+.|.+
T Consensus 197 ~~a~~l---~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~af~ekr~p~~ 260 (262)
T PRK07509 197 ALAREI---AQRSPDAIAAAKRLINRSWTASVRALLARESVEQIRLLLGKNQKIAVKAQMKKRAPKF 260 (262)
T ss_pred HHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCC
Confidence 345555 455888888888887654332 2222333445666666 5788888889999986643
No 189
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=44.61 E-value=49 Score=30.16 Aligned_cols=91 Identities=10% Similarity=0.034 Sum_probs=59.4
Q ss_pred HhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHH
Q 018384 182 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHR 259 (357)
Q Consensus 182 l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 259 (357)
..+.+... |.++-+-.+.++.++..+ ...+.++.+ +..+|.++...|+.++...... ......+
T Consensus 160 ~g~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---a~~~~~~~~~~K~~l~~~~~~~~~~~~~~e 225 (256)
T TIGR02280 160 LGEKLDARTAASWGLIWQVVDDAALMD-----------EAQALAVHL---AAQPTRGLALTKRAIQAAATNSLDTQLDLE 225 (256)
T ss_pred cCCCCCHHHHHHcCCcceeeChHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhhcCCHHHHHHHH
Confidence 33455555 888888888888776553 234455544 4567889999998887544322 2333344
Q ss_pred HHHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 260 IDIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 260 ~~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
...+..++ +.+..+++.++++|+.|.+
T Consensus 226 ~~~~~~~~~~~d~~eg~~af~~kr~p~~ 253 (256)
T TIGR02280 226 RDLQRELGRSADYAEGVTAFLDKRNPQF 253 (256)
T ss_pred HHHHHHHhcChhHHHHHHHHHcCCCCCC
Confidence 55667777 5677778888899887654
No 190
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=44.33 E-value=44 Score=30.74 Aligned_cols=89 Identities=12% Similarity=0.144 Sum_probs=58.9
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCC-ChhhHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIHRID 261 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 261 (357)
+.+... |.++-+--+.++.++..+ +..+.++.++ ..+|.++...|+.++..... ..........
T Consensus 175 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l~---~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 240 (269)
T PRK06127 175 RRFDAAEALRIGLVHRVTAADDLET-----------ALADYAATIA---GNAPLTLRAAKRAIAELLKDEPERDMAACQA 240 (269)
T ss_pred CCCCHHHHHHcCCCCEeeCHHHHHH-----------HHHHHHHHHH---hCCHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 455556 888888888888776542 2344556553 35788888888888765433 2333444556
Q ss_pred HHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 262 IVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 262 ~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
.+..++ +.+..+++.++++|+.|.+
T Consensus 241 ~~~~~~~~~d~~e~~~af~ekr~p~~ 266 (269)
T PRK06127 241 LVAACFDSEDYREGRAAFMEKRKPVF 266 (269)
T ss_pred HHHHHhcChHHHHHHHHHhcCCCCCC
Confidence 777777 4677777888899886653
No 191
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=44.09 E-value=38 Score=31.43 Aligned_cols=91 Identities=13% Similarity=0.145 Sum_probs=60.8
Q ss_pred HhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCC-CChhhHHHH
Q 018384 182 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVY-PDKNSVIHR 259 (357)
Q Consensus 182 l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 259 (357)
-.+.++.+ |..+-|-.+.++.+++++ +-...++. ++..+|..+...|+..+.... .....+...
T Consensus 194 tg~~~~AqeA~~~GlVn~Vvp~~~~l~-----------eAv~l~~~---Ia~~~~~~v~~~K~svn~~~e~~l~e~l~~e 259 (290)
T KOG1680|consen 194 TGRRLGAQEAKKIGLVNKVVPSGDALG-----------EAVKLAEQ---IAKNSPLVVRADKESVNAAYETTLFEGLELE 259 (290)
T ss_pred hcCcccHHHHHhCCceeEeecchhHHH-----------HHHHHHHH---HHhCCHHHHHHHHHHHHHHhhccHHHHHHhh
Confidence 34678888 999999999999999662 12223333 356778888888887776332 222233344
Q ss_pred HHHHHHHcC-CCCHHHHHHHHhcccCCC
Q 018384 260 IDIVDKCFG-LDTVEEIIDSLESEASLI 286 (357)
Q Consensus 260 ~~~~~~~~~-~~~~e~i~~~l~~~~~~~ 286 (357)
...+...|. .+..|++.++.+|+.+++
T Consensus 260 ~~~~~s~~~~~d~~Eg~~~f~~kr~~~~ 287 (290)
T KOG1680|consen 260 RDLFGSTFATEDRLEGMTAFAEKRKPKF 287 (290)
T ss_pred hhhhhhhhhhHHHHHHHHHhcccCCccc
Confidence 555666664 788899999988886644
No 192
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=43.90 E-value=46 Score=30.51 Aligned_cols=91 Identities=14% Similarity=0.017 Sum_probs=58.4
Q ss_pred HhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCC-ChhhHHHH
Q 018384 182 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIHR 259 (357)
Q Consensus 182 l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 259 (357)
..+.++.. |.++-+-.+.++.++..+ ...+.+..+ +..+|.++...|+.++..... ........
T Consensus 170 ~g~~~~a~eA~~~Glv~~vv~~~~~~~-----------~a~~~a~~l---~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e 235 (266)
T PRK05981 170 LGEKLPAETALQWGLVNRVVDDAELMA-----------EAMKLAHEL---ANGPTVALGLIRKLYWDSPENDFEEQLNLE 235 (266)
T ss_pred hCCCcCHHHHHHcCCceEeeCHhHHHH-----------HHHHHHHHH---HcCCHHHHHHHHHHHHHhhhcCHHHHHHHH
Confidence 33455555 788877778888776553 223345544 356778888888888654322 23333444
Q ss_pred HHHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 260 IDIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 260 ~~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
...+..+| +.+..+++.++++|+.|.+
T Consensus 236 ~~~~~~~~~s~d~~e~~~af~~kr~~~~ 263 (266)
T PRK05981 236 REAQRIAGKTEDFKEGVGAFLQKRPAQF 263 (266)
T ss_pred HHHHHHHhcChhHHHHHHHHhcCCCCCC
Confidence 55667777 5677888888899987654
No 193
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=43.65 E-value=53 Score=30.30 Aligned_cols=90 Identities=7% Similarity=-0.090 Sum_probs=56.4
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID 261 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (357)
.+.++.. |.++-+-.+.++.++..+ ...+.++.+ +..+|.++...|+.++............+..
T Consensus 175 g~~~~A~eA~~~GLv~~vv~~~~l~~-----------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~e~~ 240 (273)
T PRK07396 175 CRQYDAQEALDMGLVNTVVPLADLEK-----------ETVRWCREM---LQNSPMALRCLKAALNADCDGQAGLQELAGN 240 (273)
T ss_pred CCCcCHHHHHHcCCcCeecCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhhccHHHHHHHHHH
Confidence 4556666 888888888888776552 223344444 4568888888888776543221111222344
Q ss_pred HHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 262 IVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 262 ~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
.+..++ +.+..+++.++++|+.|.+
T Consensus 241 ~~~~~~~~~d~~egi~af~~kr~p~~ 266 (273)
T PRK07396 241 ATMLFYMTEEAQEGRNAFNEKRQPDF 266 (273)
T ss_pred HHHHHhcChhHHHHHHHHhCCCCCCC
Confidence 555666 5677788888899987654
No 194
>PRK08321 naphthoate synthase; Validated
Probab=41.67 E-value=60 Score=30.51 Aligned_cols=135 Identities=10% Similarity=0.044 Sum_probs=77.3
Q ss_pred ccceechhhhhhccC--CeEEEeCceEEeccccccc--ccCC-CcHH-----HHHhhcChHH-HHHHHhcCCCCCHHHHH
Q 018384 138 NGVTMGGGAGVSIPG--TFRVACGKTVFATPETLIG--FHPD-AGAS-----FYLSHLPGHL-GEFLALTGAKLNGAEMM 206 (357)
Q Consensus 138 ~G~a~GgG~~lal~~--D~~ia~~~a~f~~pe~~~G--l~p~-~g~~-----~~l~r~~g~~-a~~l~ltG~~i~a~eA~ 206 (357)
-|..+...|.+.+++ |-+++-..+.+++.-...| ..|. .|.. .+..+.++.. |.++-+--+.++.++..
T Consensus 149 gG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~ 228 (302)
T PRK08321 149 GGHSLHVVCDLTLASREHARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYSAEEAHDMGAVNAVVPHAELE 228 (302)
T ss_pred HHHHHHHhCCEEEEecCCCEEECCccccccCCCchHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCceEeeCHHHHH
Confidence 344455566666666 3667766666664322111 1222 1211 1233455555 88887877888876654
Q ss_pred HcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHc-CCCCHHHHHHHHhcccCC
Q 018384 207 ACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF-GLDTVEEIIDSLESEASL 285 (357)
Q Consensus 207 ~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~i~~~l~~~~~~ 285 (357)
+ ...+.++.+ +..+|.+++..|+.++................+..++ +.+..+++.++++|+.|.
T Consensus 229 ~-----------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~e~~~~~~~~~~~d~~egi~af~ekr~p~ 294 (302)
T PRK08321 229 T-----------EALEWAREI---NGKSPTAMRMLKYAFNLTDDGLVGQQLFAGEATRLAYMTDEAQEGRDAFLEKRDPD 294 (302)
T ss_pred H-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHhcCHHHHHHHHHHhccCCCC
Confidence 2 233345444 4568888888888876543322222223445566677 467778888889998765
Q ss_pred C
Q 018384 286 I 286 (357)
Q Consensus 286 ~ 286 (357)
+
T Consensus 295 ~ 295 (302)
T PRK08321 295 W 295 (302)
T ss_pred C
Confidence 4
No 195
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=41.39 E-value=56 Score=29.77 Aligned_cols=89 Identities=8% Similarity=0.066 Sum_probs=57.4
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCC-ChhhHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIHRID 261 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 261 (357)
+.+... |.++-+--+.++.++..+ ...+.++.+ +..+|.++...|+.++..... .......+..
T Consensus 163 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~ 228 (257)
T PRK05862 163 RMMDAAEAERAGLVSRVVPADKLLD-----------EALAAATTI---ASFSLPAVMMAKEAVNRAYETTLAEGLLFERR 228 (257)
T ss_pred CccCHHHHHHcCCCCEeeCHhHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 445555 888878888887766542 223345444 346788888888888764332 2333444455
Q ss_pred HHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 262 IVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 262 ~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
.+..++ +.+..+.+.++++|+.|.+
T Consensus 229 ~~~~~~~s~~~~e~i~af~~kr~p~~ 254 (257)
T PRK05862 229 LFHSLFATEDQKEGMAAFVEKRKPVF 254 (257)
T ss_pred HHHHHhcChhHHHHHHHHhccCCCCC
Confidence 667777 5677888888899886653
No 196
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=40.92 E-value=73 Score=29.14 Aligned_cols=89 Identities=15% Similarity=0.057 Sum_probs=54.6
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhh-HHHHH-
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRI- 260 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 260 (357)
+.+... |.++-+-.+.++.++..+ ...+.++.+ +..+|.++...|+.++......... .....
T Consensus 163 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 228 (261)
T PRK03580 163 RRMDAEEALRWGIVNRVVPQAELMD-----------RARELAQQL---VNSAPLAIAALKEIYRETSEMPVEEAYRYIRS 228 (261)
T ss_pred CccCHHHHHHcCCCcEecCHhHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHh
Confidence 445555 788877778888766542 223344544 4567888888888886543322211 11111
Q ss_pred ---HHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 261 ---DIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 261 ---~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
..+..++ +.+..+++.++++|+.|.+
T Consensus 229 ~~~~~~~~~~~~~d~~e~~~af~ekr~~~~ 258 (261)
T PRK03580 229 GVLKHYPSVLHSEDALEGPRAFAEKRDPVW 258 (261)
T ss_pred hhHHHHHHHhcCccHHHHHHHHhcCCCCCC
Confidence 3566677 5677888888899986653
No 197
>PLN02522 ATP citrate (pro-S)-lyase
Probab=40.33 E-value=69 Score=33.38 Aligned_cols=52 Identities=23% Similarity=0.282 Sum_probs=32.0
Q ss_pred HHHHHHHHHcCCCceEEEEecC-CCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q 018384 66 LNKLFKAWENDPNIGFVSMKGS-GRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 142 (357)
Q Consensus 66 L~~~l~~~~~d~~v~~vvl~g~-g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~ 142 (357)
+.+.|+.+++||++++|++.++ |.. | . .++.+ ..+.. +..||||+.+-|.+-
T Consensus 210 ~~D~L~~~~~Dp~Tk~IvlygEiGg~-----~------------e---~~f~e----a~~~a-~~~KPVVa~kaGrsa 262 (608)
T PLN02522 210 LSDHVLRFNNIPQIKMIVVLGELGGR-----D------------E---YSLVE----ALKQG-KVSKPVVAWVSGTCA 262 (608)
T ss_pred HHHHHHHHhcCCCCCEEEEEEecCch-----h------------H---HHHHH----HHHHh-cCCCCEEEEeccCCC
Confidence 4566777778888888888775 310 0 1 11221 22222 268999999999876
No 198
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=39.76 E-value=56 Score=29.82 Aligned_cols=89 Identities=12% Similarity=0.233 Sum_probs=58.8
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 261 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 261 (357)
+.+... |.++-+-.+.++.++..+ ...+.++.+ +..+|.++...|+.++...... ......+..
T Consensus 166 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 231 (260)
T PRK05809 166 DMINAEEALRIGLVNKVVEPEKLME-----------EAKALANKI---AANAPIAVKLCKDAINRGMQVDIDTAVAIEAE 231 (260)
T ss_pred CCCCHHHHHHcCCCCcccChHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 344555 788878888888776542 344456555 3567889999998887654322 233344556
Q ss_pred HHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 262 IVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 262 ~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
.+..++ +.+..+++.++++|+.|.+
T Consensus 232 ~~~~~~~~~~~~egi~af~~~r~p~~ 257 (260)
T PRK05809 232 DFGECFSTEDQTEGMTAFVEKREKNF 257 (260)
T ss_pred HHHHHhcCHHHHHHHHHHhcCCCCCC
Confidence 677777 4677788888899987654
No 199
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=39.69 E-value=59 Score=29.70 Aligned_cols=90 Identities=12% Similarity=0.099 Sum_probs=59.7
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRI 260 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 260 (357)
.+.+... |.++-+-.+.++.++..+ ...+.++.+ +..+|.++...|+.++...... ......+.
T Consensus 165 g~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~ 230 (260)
T PRK07657 165 GRRISAQEAKEIGLVEFVVPAHLLEE-----------KAIEIAEKI---ASNGPIAVRQAKEAISNGIQVDLHTGLQIEK 230 (260)
T ss_pred CCCCCHHHHHHcCCCCeecCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 3455555 888878888888777553 344455554 4568899999999887654322 23334445
Q ss_pred HHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 261 DIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 261 ~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
..+..++ +.+..+++.++++++.|.+
T Consensus 231 ~~~~~~~~~~~~~e~~~af~~~r~~~~ 257 (260)
T PRK07657 231 QAYEGTIPTKDRLEGLQAFKEKRKPMY 257 (260)
T ss_pred HHHHHHhcCHhHHHHHHHHhcCCCCCC
Confidence 5677777 5677888888889886654
No 200
>PRK08139 enoyl-CoA hydratase; Validated
Probab=39.33 E-value=69 Score=29.41 Aligned_cols=90 Identities=11% Similarity=0.079 Sum_probs=57.8
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRI 260 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 260 (357)
.+.+... |.++-+-.+.++.++..+ ...+.++.+ +..+|.++...|+.++...... ........
T Consensus 171 g~~~~a~eA~~~GLv~~vv~~~~l~~-----------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~ 236 (266)
T PRK08139 171 GEFIDAATAREWGLVNRVVPADALDA-----------AVARLAAVI---AAKSPAAVRIGKEAFYRQAEMPLADAYAYAG 236 (266)
T ss_pred CCccCHHHHHHcCCccEeeChhHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 3455555 888888888888665442 233445555 3457889999998887654332 23333444
Q ss_pred HHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 261 DIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 261 ~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
..+..++ +.+..+++.++++|+.|.+
T Consensus 237 ~~~~~~~~~~d~~eg~~af~~kr~p~~ 263 (266)
T PRK08139 237 DVMAENMMAEDAEEGIDAFLEKRPPEW 263 (266)
T ss_pred HHHHHHhcCchHHHHHHHHhcCCCCCC
Confidence 5566666 5677888888899886654
No 201
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=38.97 E-value=62 Score=29.85 Aligned_cols=90 Identities=10% Similarity=0.052 Sum_probs=56.9
Q ss_pred hhcChHH-HHHHHhcCCCCCH-HHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCC-ChhhHHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNG-AEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIHR 259 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a-~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 259 (357)
.+.+... |.++-+-.+.++. ++.. +...+.++.+ +..+|.+++..|+.++..... ........
T Consensus 179 g~~~~a~eA~~~GLv~~vv~~~~~l~-----------~~~~~~a~~i---a~~~p~a~~~~K~~l~~~~~~~~~~~~~~e 244 (275)
T PLN02664 179 GRRFSGSEAKELGLVSRVFGSKEDLD-----------EGVRLIAEGI---AAKSPLAVTGTKAVLLRSRELSVEQGLDYV 244 (275)
T ss_pred CCCCCHHHHHHcCCCceeeCChhHHH-----------HHHHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 3455666 8888888888874 4333 2234445544 456889999888888754322 22233334
Q ss_pred HHHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 260 IDIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 260 ~~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
...+..++ +.+..|++.++++|+.|.+
T Consensus 245 ~~~~~~~~~~~d~~eg~~af~ekr~p~~ 272 (275)
T PLN02664 245 ATWNSAMLVSDDLNEAVSAQIQKRKPVF 272 (275)
T ss_pred HHHHHHhccChhHHHHHHHHhccCCCCC
Confidence 45566666 5777888888899986643
No 202
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=38.69 E-value=42 Score=32.76 Aligned_cols=158 Identities=9% Similarity=-0.034 Sum_probs=86.3
Q ss_pred hcCCCcEEEEEccceechhhhhhccCC-eEEEeCceEEecccccccc---cCCCcHH-----HHHhhcChHH-HHHHHhc
Q 018384 127 GTHLKPHVAILNGVTMGGGAGVSIPGT-FRVACGKTVFATPETLIGF---HPDAGAS-----FYLSHLPGHL-GEFLALT 196 (357)
Q Consensus 127 ~~~~kPvIa~v~G~a~GgG~~lal~~D-~~ia~~~a~f~~pe~~~Gl---~p~~g~~-----~~l~r~~g~~-a~~l~lt 196 (357)
....-+.++. |..+...+.+..+++ -+++-+.+.+|+.-. .|. .|-.++. .+..+.++.. |.++-+-
T Consensus 110 AaV~G~a~Gg--G~~LalacD~ria~~~a~f~~pe~~iGl~p~-~g~~~~L~rl~g~~a~~l~ltG~~i~a~eA~~~GLv 186 (379)
T PLN02874 110 ALVHGLVMGG--GAGLMVPMKFRVVTEKTVFATPEASVGFHTD-CGFSYILSRLPGHLGEYLALTGARLNGKEMVACGLA 186 (379)
T ss_pred EEecCeEEec--HHHHHHhCCeEEEeCCeEEeccccccCcCCC-hhHHHHHHhhhHHHHHHHHHcCCcccHHHHHHcCCc
Confidence 3444455544 666777777777654 578888888887532 221 2332221 1222445555 7777777
Q ss_pred CCCCCHHHHHHc--C-----------------------------------ccceecCCCChhH---------------HH
Q 018384 197 GAKLNGAEMMAC--G-----------------------------------LATHYSVSEKLPL---------------IE 224 (357)
Q Consensus 197 G~~i~a~eA~~~--G-----------------------------------Lv~~vv~~~~l~~---------------~~ 224 (357)
-+.++.++..+. - .++.++....+.+ .+
T Consensus 187 ~~vv~~~~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~eii~al~~~~~~~~~~~A 266 (379)
T PLN02874 187 THFVPSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKDTVEEIIKAFESEASKTGNEWI 266 (379)
T ss_pred cEEeCHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHhhcccccccHHH
Confidence 777777665430 0 1111122122221 11
Q ss_pred -HHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHHHHHHHH-c---CCCCHHHHHHHH-hc-ccCCCC
Q 018384 225 -EELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKC-F---GLDTVEEIIDSL-ES-EASLIN 287 (357)
Q Consensus 225 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~---~~~~~e~i~~~l-~~-~~~~~~ 287 (357)
+.++.+...+|.+++..|+.++...... ...+..+......+ . +.+..|++.+++ +| +.|++.
T Consensus 267 ~~~a~~l~~~sP~al~~tk~~~~~~~~~~l~~~l~~e~~~~~~~~~~~~~~D~~EGv~AflidK~r~P~w~ 337 (379)
T PLN02874 267 KETLKGLRRSSPTGLKITLRSIREGRKQSLAECLKKEFRLTMNILRSTVSDDVYEGIRALVIDKDNAPKWN 337 (379)
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhcCcCcchhhccceEEEcCCCCCCCC
Confidence 3346778899999999999887543322 22223333333322 3 567788888886 67 766543
No 203
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=38.67 E-value=76 Score=29.03 Aligned_cols=90 Identities=13% Similarity=0.070 Sum_probs=56.9
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRI 260 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 260 (357)
.+.+... |.++-+-.+.++.++..+ + ..+.++.+ ...+|.++...|+.++...... ......+.
T Consensus 168 g~~~~a~eA~~~Glv~~vv~~~~l~~-----~------a~~~a~~~---~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~ 233 (263)
T PRK07799 168 GRHITAAEAKEIGLIGHVVPDGQALD-----K------ALELAELI---NANGPLAVQAILRTIRETEGMHENEAFKIDT 233 (263)
T ss_pred CCCCCHHHHHHcCCccEecCcchHHH-----H------HHHHHHHH---HhcChHHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 3456666 888888888887665432 1 12344444 4568888888888887543322 23334445
Q ss_pred HHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 261 DIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 261 ~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
..+..++ +.+..+++.++++|+.|.+
T Consensus 234 ~~~~~~~~~~~~~egi~af~~~r~p~~ 260 (263)
T PRK07799 234 KIGIPVFLSEDAKEGPRAFAEKRAPNF 260 (263)
T ss_pred HHHHHHhcCccHHHHHHHHHccCCCCC
Confidence 5667777 4677778888898886643
No 204
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=38.30 E-value=65 Score=29.39 Aligned_cols=90 Identities=16% Similarity=0.059 Sum_probs=59.1
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRI 260 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 260 (357)
.+.+... |.++-+-.+.++.++.. +...+.++.+ +..+|.++...|+.+....... ........
T Consensus 162 g~~~~a~eA~~~GLv~~vv~~~~~~-----------~~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~ 227 (257)
T PRK06495 162 GYRVPAAELYRRGVIEACLPPEELM-----------PEAMEIAREI---ASKSPLATRLAKDALNTIENMSLRDGYRYEQ 227 (257)
T ss_pred CCeeCHHHHHHcCCcceecCHHHHH-----------HHHHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 3556666 88888888888877654 2344456555 4568899998888887543322 22333344
Q ss_pred HHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 261 DIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 261 ~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
..+..++ +.+..+++.++++|+.|.+
T Consensus 228 ~~~~~~~~s~d~~egi~af~~kr~p~~ 254 (257)
T PRK06495 228 DITAKLAKTEDAKEAQRAFLEKRPPVF 254 (257)
T ss_pred HHHHHHhcChHHHHHHHHHhccCCCCC
Confidence 5566666 5677788888899987654
No 205
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=37.73 E-value=70 Score=29.21 Aligned_cols=90 Identities=13% Similarity=0.073 Sum_probs=57.6
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhh-HHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNS-VIHR 259 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~ 259 (357)
.+.+... |.++-+-.+.++.++..+ ...+.++.+ +..+|.++...|+.++...... ... ....
T Consensus 166 g~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e 231 (262)
T PRK05995 166 AERFDAAEALRLGLVHEVVPAEALDA-----------KVDELLAAL---VANSPQAVRAGKRLVRDVAGRPIDAALIADT 231 (262)
T ss_pred CCccCHHHHHHcCCCCeecCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhhcCChhhHHHHHH
Confidence 3455555 888888888888776543 234455555 3568889988888886543222 222 3333
Q ss_pred HHHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 260 IDIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 260 ~~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
...+..++ +.+..+++.++++|+.|.+
T Consensus 232 ~~~~~~~~~~~d~~e~~~af~~kr~p~~ 259 (262)
T PRK05995 232 ASRIALIRATEEAREGVAAFLEKRKPAW 259 (262)
T ss_pred HHHHHHHhcCHHHHHHHHHHhcCCCCCC
Confidence 45566666 4677888888899987654
No 206
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=37.62 E-value=68 Score=29.35 Aligned_cols=89 Identities=8% Similarity=0.022 Sum_probs=56.0
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCC-ChhhHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIHRID 261 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 261 (357)
+.+... |.++-+-.+.++.++..+ ...+.++.+ +..+|.++...|+.++..... ..........
T Consensus 172 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 237 (266)
T PRK09245 172 DAIDAATALEWGLVSRVVPADQLLP-----------AARALAERI---AANPPHALRLTKRLLREGQHASLDTLLELSAA 237 (266)
T ss_pred CCcCHHHHHHcCCcceecCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Confidence 445555 888888888888776543 223345444 456888888888888754322 2222333445
Q ss_pred HHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 262 IVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 262 ~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
.+..++ +.+..+++.++++|+.|.+
T Consensus 238 ~~~~~~~~~d~~eg~~af~~kr~p~~ 263 (266)
T PRK09245 238 YQALAHHTADHREAVDAFLEKRPPVF 263 (266)
T ss_pred HHHHHhcCHhHHHHHHHHHcCCCCCC
Confidence 566676 4677778888899886643
No 207
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=37.48 E-value=78 Score=29.08 Aligned_cols=90 Identities=13% Similarity=0.080 Sum_probs=51.8
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDI 262 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (357)
+.+... |.++-+-.+.++.++..+. ..+.++.+ +..+|.++...|+.++................
T Consensus 175 ~~~~a~eA~~~Glv~~vv~~~~l~~~-----------a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~ 240 (268)
T PRK07327 175 EPVSGEEAERIGLVSLAVDDDELLPK-----------ALEVAERL---AAGSQTAIRWTKYALNNWLRMAGPTFDTSLAL 240 (268)
T ss_pred CccCHHHHHHcCCcceecCHHHHHHH-----------HHHHHHHH---HcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHH
Confidence 444555 7777777777777665432 23345444 45678888888887764321111111222222
Q ss_pred HHHHc-CCCCHHHHHHHHhcccCCCC
Q 018384 263 VDKCF-GLDTVEEIIDSLESEASLIN 287 (357)
Q Consensus 263 ~~~~~-~~~~~e~i~~~l~~~~~~~~ 287 (357)
....+ +.+..+++.++++|+.|.+.
T Consensus 241 ~~~~~~~~d~~eg~~af~ekr~p~~~ 266 (268)
T PRK07327 241 EFMGFSGPDVREGLASLREKRAPDFP 266 (268)
T ss_pred HHHHccChhHHHHHHHHHhcCCCCCC
Confidence 22345 56778888888999877653
No 208
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=36.67 E-value=96 Score=29.25 Aligned_cols=12 Identities=50% Similarity=0.728 Sum_probs=10.6
Q ss_pred CCcEEEEEccce
Q 018384 130 LKPHVAILNGVT 141 (357)
Q Consensus 130 ~kPvIa~v~G~a 141 (357)
.||||+..-|..
T Consensus 233 ~KPVV~lk~Grs 244 (300)
T PLN00125 233 EKPVVAFIAGLT 244 (300)
T ss_pred CCCEEEEEecCC
Confidence 899999988876
No 209
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=36.61 E-value=1.7e+02 Score=22.12 Aligned_cols=50 Identities=12% Similarity=0.123 Sum_probs=35.1
Q ss_pred EEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCcc
Q 018384 37 LVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAF 91 (357)
Q Consensus 37 ~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F 91 (357)
.++..+++.++++..| ++.....++.+.+..+-..+..+.|+|--.+-.|
T Consensus 2 ~~~~~~~~~vi~l~G~-----L~f~~~~~~~~~l~~~~~~~~~~~vilDls~v~~ 51 (106)
T TIGR02886 2 EFEVKGDVLIVRLSGE-----LDHHTAERVRRKIDDAIERRPIKHLILNLKNVTF 51 (106)
T ss_pred eEEEECCEEEEEEecc-----cchhhHHHHHHHHHHHHHhCCCCEEEEECCCCcE
Confidence 4678889999999755 5666666777777665433457888888776444
No 210
>PLN02888 enoyl-CoA hydratase
Probab=36.11 E-value=67 Score=29.49 Aligned_cols=92 Identities=9% Similarity=0.107 Sum_probs=58.4
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRI 260 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 260 (357)
.+.+... |.++-+--+.++.++..+ ...+.++.+ +..+|.++...|+.++...... ......+.
T Consensus 167 g~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~ 232 (265)
T PLN02888 167 AMPLTAETAERWGLVNHVVEESELLK-----------KAREVAEAI---IKNNQGMVLRYKSVINDGLKLDLGHALQLEK 232 (265)
T ss_pred CCccCHHHHHHcCCccEeeChHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 3456656 888888888887665442 123345444 4568888888888887543322 22333344
Q ss_pred HHHHHHc---CCCCHHHHHHHHhcccCCCCC
Q 018384 261 DIVDKCF---GLDTVEEIIDSLESEASLIND 288 (357)
Q Consensus 261 ~~~~~~~---~~~~~e~i~~~l~~~~~~~~~ 288 (357)
..+..++ +.+..+++.++++|+.++..+
T Consensus 233 ~~~~~~~~~~~~d~~e~~~af~ekr~~~~~~ 263 (265)
T PLN02888 233 ERAHDYYNGMTKEQFQKMQEFIAGRSSKKPS 263 (265)
T ss_pred HHHHHHhccCCHHHHHHHHHHHhcCCCCCCC
Confidence 4556664 567888888999998776543
No 211
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=35.68 E-value=83 Score=28.90 Aligned_cols=90 Identities=12% Similarity=0.127 Sum_probs=56.9
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcC-CHHHHHHHHHHhhccCCCC-hhhHHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTD-DPSVIEACLEKYSDLVYPD-KNSVIHR 259 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~ 259 (357)
.+.+... |.++-+--+.++.++..+ ...+.++.+ +.. +|.++...|+.++...... .......
T Consensus 176 g~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~i---~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e 241 (272)
T PRK06210 176 ARTFYAEEALRLGLVNRVVPPDELME-----------RTLAYAEDL---ARNVSPASMAVIKRQLYEDAFQTLAEATARA 241 (272)
T ss_pred CCccCHHHHHHcCCcceecCHHHHHH-----------HHHHHHHHH---HhcCCHHHHHHHHHHHHhcccCCHHHHHHHH
Confidence 3445555 888878778887766542 223344444 433 7889999998887654322 2333344
Q ss_pred HHHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 260 IDIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 260 ~~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
...+...+ +.+..+++.++++|+.|.+
T Consensus 242 ~~~~~~~~~~~~~~egi~af~~kr~p~~ 269 (272)
T PRK06210 242 NREMHESLQRPDFIEGVASFLEKRPPRF 269 (272)
T ss_pred HHHHHHHhcCccHHHHHHHHhccCCCCC
Confidence 55666666 5677888888899886643
No 212
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=35.16 E-value=71 Score=29.04 Aligned_cols=89 Identities=13% Similarity=0.119 Sum_probs=58.4
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCC-CChhhHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVY-PDKNSVIHRID 261 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 261 (357)
+.+... |.++-+--+.++.++..+ +..+.++.+ ...+|.++...|+.++.... +.......+..
T Consensus 163 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 228 (257)
T PRK07658 163 EPITGAEALKWGLVNGVFPEETLLD-----------DAKKLAKKI---AGKSPATTRAVLELLQTTKSSSYYEGVKREAK 228 (257)
T ss_pred CCcCHHHHHHcCCcCeecChhHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 455555 788877778888776542 345556655 34678888888888765432 22333444556
Q ss_pred HHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 262 IVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 262 ~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
.+..++ +.+..+++.++++|+.|.+
T Consensus 229 ~~~~~~~~~~~~egi~af~~kr~p~~ 254 (257)
T PRK07658 229 IFGEVFTSEDAKEGVQAFLEKRKPSF 254 (257)
T ss_pred HHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 677777 4677788888899886653
No 213
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=34.80 E-value=84 Score=28.83 Aligned_cols=89 Identities=12% Similarity=0.061 Sum_probs=56.6
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCCh-hhHH-HHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDK-NSVI-HRI 260 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~ 260 (357)
+.+... |.++-+-.+.++.++..+. ..+.+..+ +..+|.++...|+.++....... .... ...
T Consensus 169 ~~~~a~eA~~~Glv~~vv~~~~l~~~-----------a~~~a~~l---a~~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~ 234 (265)
T PRK05674 169 ERFDGRRARELGLLAESYPAAELEAQ-----------VEAWIANL---LLNSPQALRASKDLLREVGDGELSPALRRYCE 234 (265)
T ss_pred cccCHHHHHHCCCcceecCHHHHHHH-----------HHHHHHHH---HhcCHHHHHHHHHHHHHhhccChhHHHHHHHH
Confidence 445555 8888888888887665532 33445544 45688999999988876543322 1222 223
Q ss_pred HHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 261 DIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 261 ~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
..+..++ +.+..+++.++++|+.|.+
T Consensus 235 ~~~~~~~~s~d~~e~~~af~~kr~p~~ 261 (265)
T PRK05674 235 NAIARIRVSAEGQEGLRAFLEKRTPAW 261 (265)
T ss_pred HHHHHHhcCHHHHHHHHHHHccCCCCC
Confidence 4566666 5677888888899986643
No 214
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=34.64 E-value=1e+02 Score=28.23 Aligned_cols=89 Identities=11% Similarity=0.039 Sum_probs=55.6
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCC--CC-hhhHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVY--PD-KNSVIHR 259 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~ 259 (357)
+.+... |.++-+--+.++.++... ...+.++.+ +..+|.++...|+.++.... .. .......
T Consensus 165 ~~~~a~eA~~~GLv~~vv~~~~l~~-----------~a~~~a~~l---~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~ 230 (261)
T PRK11423 165 SPITAQRALAVGILNHVVEVEELED-----------FTLQMAHHI---SEKAPLAIAVIKEQLRVLGEAHPMNPDEFERI 230 (261)
T ss_pred CCcCHHHHHHcCCcCcccCHHHHHH-----------HHHHHHHHH---HhcCHHHHHHHHHHHHhhcccCCcchHHHHHH
Confidence 445555 778877778888766542 223344444 45578888888888864322 11 2233333
Q ss_pred HHHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 260 IDIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 260 ~~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
......+| +.+..+++.++++|+.|.+
T Consensus 231 ~~~~~~~~~s~d~~eg~~af~~kr~p~~ 258 (261)
T PRK11423 231 QGLRRAVYDSEDYQEGMNAFLEKRKPVF 258 (261)
T ss_pred HHHHHHHhCChhHHHHHHHHhccCCCCC
Confidence 45566777 5677888888899987653
No 215
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=34.47 E-value=83 Score=28.63 Aligned_cols=89 Identities=10% Similarity=0.056 Sum_probs=57.5
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 261 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 261 (357)
+.+... |.++-+-.+.++.++..+ ...+.++.+ +..+|.++...|+.++...... ......+..
T Consensus 161 ~~~~a~eA~~~Glv~~vv~~~~~~~-----------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 226 (255)
T PRK09674 161 ESITAQQAQQAGLVSEVFPPELTLE-----------RALQLASKI---ARHSPLALRAAKQALRQSQEVDLQAGLAQERQ 226 (255)
T ss_pred CccCHHHHHHcCCCcEecChHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Confidence 445555 777777777777766442 344556655 4568899999999887654332 233344455
Q ss_pred HHHHHcC-CCCHHHHHHHHhcccCCC
Q 018384 262 IVDKCFG-LDTVEEIIDSLESEASLI 286 (357)
Q Consensus 262 ~~~~~~~-~~~~e~i~~~l~~~~~~~ 286 (357)
.+..++. .+..+++.++++|+.|.+
T Consensus 227 ~~~~~~~~~~~~e~i~af~~kr~p~~ 252 (255)
T PRK09674 227 LFTLLAATEDRHEGISAFLEKRTPDF 252 (255)
T ss_pred HHHHHhcCHHHHHHHHHHhccCCCCC
Confidence 6667774 667777778888886643
No 216
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=34.43 E-value=82 Score=28.76 Aligned_cols=91 Identities=13% Similarity=0.048 Sum_probs=58.4
Q ss_pred HhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCC-ChhhHHHH
Q 018384 182 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIHR 259 (357)
Q Consensus 182 l~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 259 (357)
..+.+... |.++-+--+.++.++.. +...+.++.+ +..+|.++...|+.++..... .......+
T Consensus 166 ~g~~~~a~eA~~~Glv~~vv~~~~l~-----------~~a~~~a~~i---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e 231 (262)
T PRK08140 166 LGEKLSAEQAEQWGLIWRVVDDAALA-----------DEAQQLAAHL---ATQPTRGLALIKQAMNASATNTLDAQLDLE 231 (262)
T ss_pred cCCCcCHHHHHHcCCccEeeChHHHH-----------HHHHHHHHHH---HhCCHHHHHHHHHHHHHhhhCCHHHHHHHH
Confidence 34556666 88888888888876644 2244455555 456788888888888754332 22333444
Q ss_pred HHHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 260 IDIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 260 ~~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
...+..++ +.+..+++.++++|+.|.+
T Consensus 232 ~~~~~~~~~~~~~~e~~~af~~kr~p~~ 259 (262)
T PRK08140 232 RDLQREAGRSADYAEGVSAFLEKRAPRF 259 (262)
T ss_pred HHHHHHHhcChhHHHHHHHHhcCCCCCC
Confidence 55666777 5677777888899886643
No 217
>PRK06091 membrane protein FdrA; Validated
Probab=32.50 E-value=1.3e+02 Score=31.03 Aligned_cols=22 Identities=32% Similarity=0.336 Sum_probs=15.5
Q ss_pred HHHHHHhcCCCcEEEEEcccee
Q 018384 121 SFIYLLGTHLKPHVAILNGVTM 142 (357)
Q Consensus 121 ~l~~~i~~~~kPvIa~v~G~a~ 142 (357)
+++.....+.||||+..-|..-
T Consensus 270 ~fl~aar~~~KPVVvlk~Grs~ 291 (555)
T PRK06091 270 KIINAMKATGKPVVALFLGYTP 291 (555)
T ss_pred HHHHHHhhCCCCEEEEEecCCc
Confidence 3444444569999999998654
No 218
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function. The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components one of which is SpoIIAA (P10727 from SWISSPROT). The four components regulate the sporulation sigma factor F. Early in sporulation, SpoIIAA is in the phosphorylated state (SpoIIAA-P), as a result of the activity of the ATP-dependent protein kinase SpoIIAB (P10728 from SWISSPROT). The site at which this protein is a conserved serine. SpoIIAB is an anti-sigma factor that in its free form inhibits F by binding to it. Competition by SpoIIAA (the anti-anti-sigma factor) for binding to SpoIIAB releases Sigma F activity []. The STAS domain is found in the anti-sigma factor antagonist SpoIIAA.; PDB: 3T6O_B 3LKL_B 1H4Z_A 1H4Y_B 1H4X_B 3NY7_A 3OIZ_A 1T6R_A 1VC1_B 1SBO_A ....
Probab=31.61 E-value=2e+02 Score=22.19 Aligned_cols=48 Identities=17% Similarity=0.191 Sum_probs=39.8
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCC--------ceEEEEecCC
Q 018384 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPN--------IGFVSMKGSG 88 (357)
Q Consensus 36 i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~--------v~~vvl~g~g 88 (357)
+.++..+++.+++++.| ++......+.+.+..+..... ++.|||--.+
T Consensus 2 ~~~~~~~~v~ii~~~g~-----l~f~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vIlD~s~ 57 (117)
T PF01740_consen 2 IEIETHDGVLIIRLDGP-----LFFANAEEFRDRIRKLIDEDPERIKKRQTIKNVILDMSG 57 (117)
T ss_dssp CEEEEETTEEEEEEESE-----ESHHHHHHHHHHHHHHHCCSSS--HTSSSSSEEEEEETT
T ss_pred CeeEEECCEEEEEEeeE-----EEHHHHHHHHHHHHHhhhcccccccccccceEEEEEEEe
Confidence 45788999999999865 788888899999988887664 7899998776
No 219
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=30.23 E-value=1e+02 Score=28.14 Aligned_cols=87 Identities=17% Similarity=0.171 Sum_probs=55.5
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCChhhHHHHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID 261 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (357)
.+.+... |.++-+-.+.++.++.. +...+.++.+ +..+|.++...|+.++..... .+.....
T Consensus 171 g~~~~a~eA~~~Glv~~vv~~~~l~-----------~~a~~~a~~i---~~~~~~a~~~~K~~l~~~~~~---~l~~~~~ 233 (262)
T PRK06144 171 ARLLEAEEALAAGLVNEVVEDAALD-----------ARADALAELL---AAHAPLTLRATKEALRRLRRE---GLPDGDD 233 (262)
T ss_pred CCCcCHHHHHHcCCcCeecCHHHHH-----------HHHHHHHHHH---HhCCHHHHHHHHHHHHHhhhc---CHHHHHH
Confidence 3455555 88888888888876643 2233455554 455888888888887654322 2223345
Q ss_pred HHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 262 IVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 262 ~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
.+..++ +.+..+++.++++|+.|.+
T Consensus 234 ~~~~~~~~~~~~e~~~af~~kr~p~~ 259 (262)
T PRK06144 234 LIRMCYMSEDFREGVEAFLEKRPPKW 259 (262)
T ss_pred HHHHHhcChHHHHHHHHHhcCCCCCC
Confidence 666777 4667777778899887653
No 220
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=29.98 E-value=1.3e+02 Score=28.01 Aligned_cols=90 Identities=9% Similarity=-0.021 Sum_probs=56.4
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhc-CCHHHHHHHHHHhhccCC--CChhhHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVT-DDPSVIEACLEKYSDLVY--PDKNSVIHR 259 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 259 (357)
+.+... |.++-+-.+.++.++.... ..+.++.+ +. .+|.++...|+.++.... .........
T Consensus 182 ~~~~a~eA~~~GLv~~vv~~~~l~~~-----------a~~~a~~i---~~~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e 247 (296)
T PRK08260 182 RVFDAQEALDGGLVRSVHPPDELLPA-----------ARALAREI---ADNTSPVSVALTRQMMWRMAGADHPMEAHRVD 247 (296)
T ss_pred CccCHHHHHHCCCceeecCHHHHHHH-----------HHHHHHHH---HhcCChHHHHHHHHHHHhcccCCCcHHHHHHH
Confidence 445555 8888888888887665422 23345444 33 378888888888875432 111222334
Q ss_pred HHHHHHHc-CCCCHHHHHHHHhcccCCCC
Q 018384 260 IDIVDKCF-GLDTVEEIIDSLESEASLIN 287 (357)
Q Consensus 260 ~~~~~~~~-~~~~~e~i~~~l~~~~~~~~ 287 (357)
...+..++ +.+..+++.++++|+.|.+.
T Consensus 248 ~~~~~~~~~~~d~~egi~af~~kr~p~f~ 276 (296)
T PRK08260 248 SRAIYSRGRSGDGKEGVSSFLEKRPAVFP 276 (296)
T ss_pred HHHHHHHccChhHHHHHHHHhcCCCCCCC
Confidence 44566666 56778888888999877654
No 221
>PF13838 Clathrin_H_link: Clathrin-H-link; PDB: 2XZG_A 3GD1_I 1BPO_C 1C9I_B 1C9L_A.
Probab=29.05 E-value=60 Score=23.23 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=28.6
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHhcccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhh
Q 018384 258 HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGR 317 (357)
Q Consensus 258 ~~~~~~~~~~~~~~~e~i~~~l~~~~~~~~~~~a~~~a~~l~~~~p~a~~~~k~~l~~~~ 317 (357)
...+.|+++|+....++ |.+++.+||..+-.+.+.|++-.
T Consensus 8 l~~~~F~~l~~~g~y~e--------------------AA~~AA~sP~giLRt~~Ti~rFk 47 (66)
T PF13838_consen 8 LYVQQFNELFSQGQYEE--------------------AAKVAANSPRGILRTPETINRFK 47 (66)
T ss_dssp HHHHHHHHHHHTT-HHH--------------------HHHHHHHSGGGTT-SHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHH--------------------HHHHHHhCccchhcCHHHHHHHH
Confidence 34566777777666665 78999999988888888887644
No 222
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=27.19 E-value=5.4e+02 Score=24.30 Aligned_cols=132 Identities=13% Similarity=0.014 Sum_probs=70.2
Q ss_pred ccCCCceEEEEeCCE---E-EEEEcCCCCCCCCCHHHHHHHHHHH-HHHHcCCCceEEEEec-CCCccccccCh-HHHHH
Q 018384 30 DDLCNQVLVEGKANS---R-MAILNRPSALNALNTNMGAKLNKLF-KAWENDPNIGFVSMKG-SGRAFCAGGDI-VSLYH 102 (357)
Q Consensus 30 ~~~~~~i~~~~~~~v---~-~I~ln~p~~~Nal~~~~~~~L~~~l-~~~~~d~~v~~vvl~g-~g~~F~~G~Dl-~~~~~ 102 (357)
+..++.+.+-.+|++ - +|...- ..|.++++-+.+-...+ .++...+.-++.||-| ..+.|--+-+. ..+..
T Consensus 95 ~~~FDlvi~p~HD~~~~~~Nvl~t~g--a~~~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~ 172 (311)
T PF06258_consen 95 PRPFDLVIVPEHDRLPRGPNVLPTLG--APNRITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLD 172 (311)
T ss_pred ccccCEEEECcccCcCCCCceEeccc--CCCcCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHH
Confidence 556677777666655 1 122222 35999999888876666 4445555545555554 45777655541 12211
Q ss_pred ----hhccCC--------hHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhccCCeEEEeCceEEecccc
Q 018384 103 ----FMNQGK--------LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168 (357)
Q Consensus 103 ----~~~~~~--------~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~ 168 (357)
...... ...-.+... .+..... +.|-+...+|.--+-=+++..+||.+|+|+++.=.+.|.
T Consensus 173 ~l~~~~~~~~~~~~vttSRRTp~~~~~----~L~~~~~-~~~~~~~~~~~~~nPy~~~La~ad~i~VT~DSvSMvsEA 245 (311)
T PF06258_consen 173 QLAALAAAYGGSLLVTTSRRTPPEAEA----ALRELLK-DNPGVYIWDGTGENPYLGFLAAADAIVVTEDSVSMVSEA 245 (311)
T ss_pred HHHHHHHhCCCeEEEEcCCCCcHHHHH----HHHHhhc-CCCceEEecCCCCCcHHHHHHhCCEEEEcCccHHHHHHH
Confidence 111100 000011111 1111111 345554557666676788999999999999876555554
No 223
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=26.90 E-value=1.4e+02 Score=27.11 Aligned_cols=88 Identities=14% Similarity=0.081 Sum_probs=55.5
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 261 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 261 (357)
+.+... |.++-+-.+.++.++..+ +..+.++.+ +..+|.++...|+.++...... ......+..
T Consensus 167 ~~~~a~eA~~~Glv~~vv~~~~~~~-----------~a~~~a~~l---~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~ 232 (260)
T PRK07511 167 KPISAERLHALGVVNRLAEPGQALA-----------EALALADQL---AAGSPNALARIKSLIADAPEATLAAQLEAERD 232 (260)
T ss_pred CCCCHHHHHHcCCccEeeCchHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence 445555 777777777777655432 123345444 4457888988888887554322 333444556
Q ss_pred HHHHHc-CCCCHHHHHHHHhcccCC
Q 018384 262 IVDKCF-GLDTVEEIIDSLESEASL 285 (357)
Q Consensus 262 ~~~~~~-~~~~~e~i~~~l~~~~~~ 285 (357)
.+..+| +.+..+.+.++++++.+.
T Consensus 233 ~~~~~~~~~~~~~~i~~f~~~r~~~ 257 (260)
T PRK07511 233 HFVASLHHADALEGIAAFLEKRAPD 257 (260)
T ss_pred HHHHHhcCchHHHHHHHHhccCCCC
Confidence 677777 467777888888887654
No 224
>KOG1255 consensus Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=26.41 E-value=1.7e+02 Score=26.77 Aligned_cols=55 Identities=27% Similarity=0.468 Sum_probs=33.9
Q ss_pred HHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q 018384 66 LNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVT 141 (357)
Q Consensus 66 L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a 141 (357)
+.++|+.+-.|++.+.+|+-|.= |+. ..++..+|.... .-..-+||||+.|.|..
T Consensus 219 FID~L~vFl~D~~t~GIiliGEI-----GG~-----------AEe~AA~flk~~-----nSg~~~kPVvsFIAG~t 273 (329)
T KOG1255|consen 219 FIDCLEVFLEDPETEGIILIGEI-----GGS-----------AEEEAAEFLKEY-----NSGSTAKPVVSFIAGVT 273 (329)
T ss_pred HHHHHHHHhcCcccceEEEEecc-----CCh-----------hhHHHHHHHHHh-----ccCCCCCceeEEeeccc
Confidence 45677777889999999998861 110 122233333221 12347899999998764
No 225
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=25.05 E-value=1.7e+02 Score=29.27 Aligned_cols=53 Identities=17% Similarity=0.295 Sum_probs=34.3
Q ss_pred HHHHHHHHHHcCCCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q 018384 65 KLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 142 (357)
Q Consensus 65 ~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~ 142 (357)
.+.+.++.+.+||++++|++..++ + . + ..+|. ...++... .||||+..-|..-
T Consensus 190 ~~~d~l~~l~~D~~t~~I~ly~E~--~---~------------~---~~~f~----~aa~~a~~-~KPVv~~k~Grs~ 242 (447)
T TIGR02717 190 DESDLLEYLADDPDTKVILLYLEG--I---K------------D---GRKFL----KTAREISK-KKPIVVLKSGTSE 242 (447)
T ss_pred CHHHHHHHHhhCCCCCEEEEEecC--C---C------------C---HHHHH----HHHHHHcC-CCCEEEEecCCCh
Confidence 556778888888888888888663 0 0 0 11222 23344444 8999999998864
No 226
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=24.60 E-value=1.5e+02 Score=27.11 Aligned_cols=90 Identities=10% Similarity=0.008 Sum_probs=56.1
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCC-ChhhHHHHH
Q 018384 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIHRI 260 (357)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 260 (357)
.+.+... |.++-+-.+.++.++..+. ..+.++.+ +..+|.++...|+.++..... .......+.
T Consensus 166 g~~~~a~eA~~~Glv~~vv~~~~l~~~-----------a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~ 231 (261)
T PRK08138 166 GCMVPAPEALAIGLVSEVVEDEQTLPR-----------ALELAREI---ARMPPLALAQIKEVVLAGADAPLDAALALER 231 (261)
T ss_pred CCCCCHHHHHHCCCCcEecCchHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4455555 8888777777776665431 23345444 345788888888887654332 223334445
Q ss_pred HHHHHHc-CCCCHHHHHHHHhcccCCC
Q 018384 261 DIVDKCF-GLDTVEEIIDSLESEASLI 286 (357)
Q Consensus 261 ~~~~~~~-~~~~~e~i~~~l~~~~~~~ 286 (357)
+.+..++ +.+..+.+.++++|+.|.+
T Consensus 232 ~~~~~~~~~~~~~~~i~af~~kr~~~~ 258 (261)
T PRK08138 232 KAFQLLFDSEDQKEGMDAFLEKRKPAY 258 (261)
T ss_pred HHHHHHhcCHHHHHHHHHHhcCCCCCC
Confidence 6677777 4566777778888876543
No 227
>PF03464 eRF1_2: eRF1 domain 2; InterPro: IPR005141 This domain is found in the release factor eRF1 which terminates protein biosynthesis by recognizing stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known []. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site []. This domain is also found in other proteins which may also be involved in translation termination ; PDB: 3AGK_A 2VGN_A 2VGM_A 3J16_A 3IZQ 3IR9_A 3OBW_A 3MCA_B 2QI2_A 3E1Y_D ....
Probab=24.42 E-value=1.2e+02 Score=24.51 Aligned_cols=45 Identities=13% Similarity=0.189 Sum_probs=30.9
Q ss_pred EEEEEEcCCCCCCC--CC----------HHHHHHHHHHHHHH--HcCCCceEEEEecCC
Q 018384 44 SRMAILNRPSALNA--LN----------TNMGAKLNKLFKAW--ENDPNIGFVSMKGSG 88 (357)
Q Consensus 44 v~~I~ln~p~~~Na--l~----------~~~~~~L~~~l~~~--~~d~~v~~vvl~g~g 88 (357)
+..|+.+-|.|+.. .+ ..++.++.+.+... ...++++.|||.|.|
T Consensus 25 ~~~i~~~ip~K~~~Gg~s~~rf~r~~~~~~f~~~i~~~l~~~f~~~~~~~~~iIiaGPG 83 (133)
T PF03464_consen 25 LQRIESNIPGKHKKGGQSQRRFEREKALEKFFKEIAEALKKYFLVNFDDVKCIIIAGPG 83 (133)
T ss_dssp EEEEE-GHCCCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHCCCHTTTCSEEEEEEST
T ss_pred EEEEEecCCCccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccEEEEECCH
Confidence 45577777887653 22 35677777777776 556779999999975
No 228
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=24.07 E-value=1.6e+02 Score=26.87 Aligned_cols=62 Identities=10% Similarity=0.071 Sum_probs=38.0
Q ss_pred hHHHHHHHhhhcCCHHHHHHHHHHhhccCCCC-hhhHHHHHHHHHHHcC-CCCHHHHHHHHhcccCC
Q 018384 221 PLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFG-LDTVEEIIDSLESEASL 285 (357)
Q Consensus 221 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~e~i~~~l~~~~~~ 285 (357)
.+.++.+ +..+|.++...|+.++...... .............+|. .+..+++.++++|+.|.
T Consensus 194 ~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~~kr~p~ 257 (260)
T PRK07827 194 AALLADL---RRGSPQGLAESKALTTAAVLAGFDRDAEELTEESARLFVSDEAREGMTAFLQKRPPR 257 (260)
T ss_pred HHHHHHH---HhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCC
Confidence 3455555 3557888888988887654332 2223334455666664 56667777778887553
No 229
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=23.20 E-value=1.6e+02 Score=26.74 Aligned_cols=88 Identities=10% Similarity=-0.010 Sum_probs=54.4
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccCCC-ChhhHHHHHH
Q 018384 184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIHRID 261 (357)
Q Consensus 184 r~~g~~-a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 261 (357)
+.+... |.++-+--+.++.++..+. ..+.++.+ ...+|.++...|+.++..... .......+..
T Consensus 165 ~~~~a~eA~~~Glv~~v~~~~~l~~~-----------a~~~a~~i---~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 230 (259)
T PRK06688 165 EPLSAEEALRIGLVNRVVPAAELDAE-----------ADAQAAKL---AAGPASALRYTKRAINAATLTELEEALAREAA 230 (259)
T ss_pred CccCHHHHHHcCCcceecCHHHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHhhhhCCHHHHHHHHHH
Confidence 445555 7777777777776554422 33445544 345788888888877654432 2333444456
Q ss_pred HHHHHcC-CCCHHHHHHHHhcccCC
Q 018384 262 IVDKCFG-LDTVEEIIDSLESEASL 285 (357)
Q Consensus 262 ~~~~~~~-~~~~e~i~~~l~~~~~~ 285 (357)
.+..++. .+..+.+.++++++.|.
T Consensus 231 ~~~~~~~~~~~~~~~~af~~~~~p~ 255 (259)
T PRK06688 231 GFGRLLRTPDFREGATAFIEKRKPD 255 (259)
T ss_pred HHHHHhCCHHHHHHHHHHHcCCCCC
Confidence 6777774 56677777888887654
No 230
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=22.52 E-value=2.8e+02 Score=25.15 Aligned_cols=53 Identities=8% Similarity=0.092 Sum_probs=38.6
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCcc
Q 018384 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAF 91 (357)
Q Consensus 33 ~~~i~~~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F 91 (357)
+..+.+...|.+. .++..+.+|++.+..+...+.++... .+++-|+.|.|+.|
T Consensus 5 ~~rillkLsGe~l-----~g~~~~gid~~~i~~~a~~i~~~~~~-g~eV~iVvGGGni~ 57 (238)
T COG0528 5 YMRILLKLSGEAL-----AGEQGFGIDPEVLDRIANEIKELVDL-GVEVAVVVGGGNIA 57 (238)
T ss_pred eEEEEEEeeccee-----cCCCCCCCCHHHHHHHHHHHHHHHhc-CcEEEEEECCCHHH
Confidence 4455666666544 23334779999999999999999865 57888888877554
No 231
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism]
Probab=22.43 E-value=1.7e+02 Score=26.02 Aligned_cols=43 Identities=28% Similarity=0.258 Sum_probs=29.8
Q ss_pred ceEEEEecCC-CccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q 018384 79 IGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (357)
Q Consensus 79 v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~ 140 (357)
..++||||+. ++|+ |..++ -.+..++..+..+.++|+..+-||
T Consensus 60 y~gfvIsGS~~dAf~---d~dWI----------------~KLcs~~kkld~mkkkvlGICFGH 103 (245)
T KOG3179|consen 60 YDGFVISGSKHDAFS---DADWI----------------KKLCSFVKKLDFMKKKVLGICFGH 103 (245)
T ss_pred hceEEEeCCcccccc---cchHH----------------HHHHHHHHHHHhhccceEEEeccH
Confidence 5678888886 6776 44333 334556677778889998877776
No 232
>KOG3997 consensus Major apurinic/apyrimidinic endonuclease/3'-repair diesterase APN1 [Replication, recombination and repair]
Probab=22.35 E-value=1.3e+02 Score=27.07 Aligned_cols=58 Identities=21% Similarity=0.225 Sum_probs=40.5
Q ss_pred EEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEecCCCccccccChHH
Q 018384 39 EGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVS 99 (357)
Q Consensus 39 ~~~~~v~~I~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~ 99 (357)
+...+|.+++=|-....|.+. ..+.+|...+..++.-..++|.+=|- ..|-+|.|+..
T Consensus 135 eetk~V~ivlEnMAGqGn~vG-~tfeelk~ii~~Ikdk~RigVClDTC--H~FaaGyDI~T 192 (281)
T KOG3997|consen 135 EETKNVIIVLENMAGQGNSVG-GTFEELKFIIGKIKDKSRIGVCLDTC--HTFAAGYDIRT 192 (281)
T ss_pred HhccceEEEeecccCCCCccc-ccHHHHHHHHHhhcchhhheeeHhhh--hhhccccccch
Confidence 445567777777777788887 45678888888887655565554443 57888998864
No 233
>TIGR02153 gatD_arch glutamyl-tRNA(Gln) amidotransferase, subunit D. This peptide is found only in the Archaea. It is part of a heterodimer, with GatE (TIGR00134), that acts as an amidotransferase on misacylated Glu-tRNA(Gln) to produce Gln-tRNA(Gln). The analogous amidotransferase found in bacteria is the GatABC system, although GatABC homologs in the Archaea appear to act instead on Asp-tRNA(Asn).
Probab=20.88 E-value=3.4e+02 Score=26.79 Aligned_cols=33 Identities=12% Similarity=0.142 Sum_probs=24.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCceEEEEecCC
Q 018384 56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG 88 (357)
Q Consensus 56 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g 88 (357)
.-++++.+.+|.+.+.+.-.+..-.+||..|..
T Consensus 118 ~~mtp~~w~~La~~I~~~~~~~~dGvVVtHGTD 150 (404)
T TIGR02153 118 ENMKPEYWIKIAEAVAKALKEGADGVVVAHGTD 150 (404)
T ss_pred hhCCHHHHHHHHHHHHHHhhcCCCcEEEecCCh
Confidence 458889999999998876655334677777764
No 234
>PRK13505 formate--tetrahydrofolate ligase; Provisional
Probab=20.85 E-value=1.8e+02 Score=29.87 Aligned_cols=70 Identities=17% Similarity=0.127 Sum_probs=42.2
Q ss_pred CCceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceechhhhhhc
Q 018384 77 PNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSI 150 (357)
Q Consensus 77 ~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~a~GgG~~lal 150 (357)
|++-|+|-|-..=-+-.|.+...+. ..+.+....-+..+.+-+..+.++.+|+|.+||-+..----++..
T Consensus 323 P~~~VlVaTvraLK~hgg~~~~~l~----~en~Eal~sGl~NL~RHIenvr~FGvPvVVAINKFd~DTe~Ei~~ 392 (557)
T PRK13505 323 PDAVVIVATVRALKMHGGVAKDDLK----EENVEALKKGFANLERHIENIRKFGVPVVVAINKFVTDTDAEIAA 392 (557)
T ss_pred CCEEEEEeehHHHHHcCCCChhhcc----ccCHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCHHHHHH
Confidence 5544444444332233444544432 234455555566677777888899999999999887665544443
No 235
>smart00463 SMR Small MutS-related domain.
Probab=20.45 E-value=2.1e+02 Score=20.64 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHcCCC-ceEEEEecCCCc
Q 018384 60 TNMGAKLNKLFKAWENDPN-IGFVSMKGSGRA 90 (357)
Q Consensus 60 ~~~~~~L~~~l~~~~~d~~-v~~vvl~g~g~~ 90 (357)
.+.+..|...++.+..... -.+.|+||.|..
T Consensus 12 ~eA~~~l~~~l~~~~~~~~~~~~~II~G~G~~ 43 (80)
T smart00463 12 EEALTALDKFLNNARLKGLEQKLVIITGKGKH 43 (80)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEEcccCC
Confidence 4677888888888887765 579999999854
No 236
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=20.29 E-value=2.4e+02 Score=26.45 Aligned_cols=22 Identities=27% Similarity=0.543 Sum_probs=14.7
Q ss_pred HHHHHHHHHcCCCceEEEEecC
Q 018384 66 LNKLFKAWENDPNIGFVSMKGS 87 (357)
Q Consensus 66 L~~~l~~~~~d~~v~~vvl~g~ 87 (357)
+.+.|+.+.+||++++|++..+
T Consensus 188 ~~D~l~~l~~Dp~T~~I~lylE 209 (291)
T PRK05678 188 FIDVLEAFEEDPETEAIVMIGE 209 (291)
T ss_pred HHHHHHHHhhCCCCcEEEEEEe
Confidence 4556666677777777777664
No 237
>PF14842 FliG_N: FliG N-terminal domain; PDB: 3HJL_A 3AJC_A 3USY_B.
Probab=20.23 E-value=1.3e+02 Score=23.54 Aligned_cols=85 Identities=22% Similarity=0.272 Sum_probs=42.2
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhc----cCCCChhhHHHHHHHHHH
Q 018384 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSD----LVYPDKNSVIHRIDIVDK 265 (357)
Q Consensus 190 a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 265 (357)
|.-|+..|+...++=.. -.+++++..+...++++-.-++..+....+.+.. .............+.+.+
T Consensus 12 AilLl~Lgee~Aa~vlk-------~l~~~ei~~i~~~ma~l~~v~~~~~~~Vl~EF~~~~~~~~~~~~gg~~~~~~lL~~ 84 (108)
T PF14842_consen 12 AILLLALGEEAAAEVLK-------HLDEEEIERISREMAKLGSVSPEEVEEVLEEFYDEIRAQGGIVSGGRDFARRLLEK 84 (108)
T ss_dssp HHHHHHS-HHHHHHHHH-------HS-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHTT---S-HHHHHHH-HHH
T ss_pred HHHHHHHCHHHHHHHHc-------cCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHccccccChHHHHHHHHHH
Confidence 45555555554444222 2466777777888888888889888888887765 223344455566677778
Q ss_pred HcCCCCHHHHHHHHhc
Q 018384 266 CFGLDTVEEIIDSLES 281 (357)
Q Consensus 266 ~~~~~~~e~i~~~l~~ 281 (357)
.++.+-.+.|++.+..
T Consensus 85 alg~~~a~~il~~~~~ 100 (108)
T PF14842_consen 85 ALGEEKAKEILDRLEQ 100 (108)
T ss_dssp HS---HHHHH------
T ss_pred HCCHHHHHHHHHHHhc
Confidence 8888888877776664
No 238
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=20.21 E-value=79 Score=28.50 Aligned_cols=76 Identities=18% Similarity=0.152 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHcCC-CceEEEEecCCCccccccChHHHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc-e
Q 018384 64 AKLNKLFKAWENDP-NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV-T 141 (357)
Q Consensus 64 ~~L~~~l~~~~~d~-~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIa~v~G~-a 141 (357)
+....+|+++..++ +|..||..+.-+.+.-|+|..-+. ++.--|-.--.-++|. |
T Consensus 106 ~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~-----------------------~LgL~~~v~R~~i~~~GC 162 (226)
T PF00195_consen 106 EAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLIN-----------------------RLGLRPDVQRTPIFGMGC 162 (226)
T ss_dssp HHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHH-----------------------HHT--TTSEEEEEES-GG
T ss_pred HHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHh-----------------------cCCCCCCcEEEEEeccch
Confidence 33445677776654 466666665445777777764332 2222233333345554 7
Q ss_pred echhhhhhccCCeEEEeCceE
Q 018384 142 MGGGAGVSIPGTFRVACGKTV 162 (357)
Q Consensus 142 ~GgG~~lal~~D~~ia~~~a~ 162 (357)
.||...|..+.|+.-+.+++.
T Consensus 163 ~gg~~~L~~A~~~~~~~p~a~ 183 (226)
T PF00195_consen 163 AGGAAGLRRAKDIARANPGAR 183 (226)
T ss_dssp GHHHHHHHHHHHHHHHSTT-E
T ss_pred hhHHHHHHHHHHHHhCCccce
Confidence 888888988888865555543
Done!