BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>018387
MAAAIAVSSPNPTILQNLIAIRDSSSGFFGGTLSGFSFQLKSRSRKRDISTLVVASSSAA
GDITRSSKSDSGRFYLNFTGFPFPLGPFLNRRTIRTEVVKGRIWLFEQEQALGFSSVSTN
IRMTVIKLKSGGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFP
RAQIWVAPRQWSWPLNLPLAFFGIFRAKTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVE
VAFYHKPSRTLLVTDAVIFVPRKPPECISKESLLASAKNGLAVKILSKGKEVPQEPVVDN
PMNQQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKGLD

High Scoring Gene Products

Symbol, full name Information P value
AT3G01060 protein from Arabidopsis thaliana 5.6e-132

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  018387
        (357 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2102162 - symbol:AT3G01060 "AT3G01060" species...  1294  5.6e-132  1
ASPGD|ASPL0000078194 - symbol:AN4711 species:162425 "Emer...   120  7.6e-05   1


>TAIR|locus:2102162 [details] [associations]
            symbol:AT3G01060 "AT3G01060" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0007623 "circadian rhythm"
            evidence=IEP] [GO:0010264 "myo-inositol hexakisphosphate
            biosynthetic process" evidence=RCA] EMBL:CP002686 GO:GO:0007623
            InterPro:IPR025638 Pfam:PF14234 EMBL:AY093064 IPI:IPI00533043
            RefSeq:NP_566129.1 UniGene:At.18324 ProteinModelPortal:Q8RWI4
            STRING:Q8RWI4 PRIDE:Q8RWI4 EnsemblPlants:AT3G01060.1 GeneID:821278
            KEGG:ath:AT3G01060 TAIR:At3g01060 InParanoid:Q8RWI4 OMA:QGLYYVA
            PhylomeDB:Q8RWI4 ProtClustDB:CLSN2687957 Genevestigator:Q8RWI4
            Uniprot:Q8RWI4
        Length = 455

 Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
 Identities = 254/317 (80%), Positives = 275/317 (86%)

Query:    42 SRSRKRDISTLVVASSSAAGDITRSSKSD-SGRFYLNFTXXXXXXXXXXNRRTIRTEVVK 100
             S +R+ +   +V ASS++   +T     D S RFY+NFT          NRRTIRTE VK
Sbjct:    42 SVNREFNSPVMVSASSTSKTVLTDDVDGDQSKRFYINFTGFPFPLGPFLNRRTIRTEAVK 101

Query:   101 GRIWLFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLVKELAAPVEYII 160
             G IW+FEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKEC+QL+KEL APVEYI+
Sbjct:   102 GCIWMFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECVQLIKELGAPVEYIV 161

Query:   161 LPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPLAFFGIFRAKTLIDEDLSTPWA 220
             LPTFAYEHKIFVGPFSRKFP+AQ+WVAPRQWSWPLNLPL FFGIFRAK + D DLSTPWA
Sbjct:   162 LPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPLEFFGIFRAKIIKDRDLSTPWA 221

Query:   221 DEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVIFVPRKPPECISKESLLASAKNG 280
             +EIEQKVLSSPEVGIGPYVEVAFYHK SRTLLVTDAVIFVPRKPP  IS ESLLASAKNG
Sbjct:   222 EEIEQKVLSSPEVGIGPYVEVAFYHKRSRTLLVTDAVIFVPRKPPSSISNESLLASAKNG 281

Query:   281 LAVKILSKGKEVPQEPVVDNPMNQQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVS 340
             LAVKILSKGK++P +PVVDNP  +QKGWERMVLQILFLGPSNLLEPNASFA+MSQKLIVS
Sbjct:   282 LAVKILSKGKDIPNDPVVDNPNTRQKGWERMVLQILFLGPSNLLEPNASFARMSQKLIVS 341

Query:   341 PIVKTLVFSKVPEKGLD 357
             PIVKTLVFSKVPEK  D
Sbjct:   342 PIVKTLVFSKVPEKVRD 358


>ASPGD|ASPL0000078194 [details] [associations]
            symbol:AN4711 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] EMBL:BN001303 EMBL:AACD01000080 RefSeq:XP_662315.1
            EnsemblFungi:CADANIAT00005719 GeneID:2872508 KEGG:ani:AN4711.2
            eggNOG:NOG68122 HOGENOM:HOG000174015 OMA:LIPCHGD OrthoDB:EOG4BZRBF
            InterPro:IPR025638 Pfam:PF14234 Uniprot:Q5B419
        Length = 269

 Score = 120 (47.3 bits), Expect = 7.6e-05, P = 7.6e-05
 Identities = 49/170 (28%), Positives = 78/170 (45%)

Query:   122 RMTVIKLKSGGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPR 181
             R T++++ SG + V +P+  T    + +  L   V+YI       EH I +  + + FP 
Sbjct:    41 RGTLVRMTSGSIAVFSPVNLTPAVRETISGLGGRVKYIA--ALDLEHHIHLTAWKKAFPD 98

Query:   182 AQIWVAPRQ-W----SWPLNLPLAFFGIFRAKTLIDEDLSTPWADEIEQKVLSSPEVGIG 236
             A I +AP   W    S P +       I R     +++ + P +DE  ++       G G
Sbjct:    99 ADI-IAPEGLWEKRQSVPEHKDTPIKYILRQSNS-NKEHTWPISDEFNKEFDIEYVYGHG 156

Query:   237 PYVEVAFYHKPSRTLLVTDAVIFVPRKPPECISKESLLASAKNGLAVKIL 286
                E+ F HKPS TL+  D +  +P +  E  SK     SA +GL  KI+
Sbjct:   157 SK-EIVFLHKPSCTLIEADLLFNLPAR--EQYSKTG--ESATSGLWTKIV 201


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      357       332   0.00090  116 3  11 22  0.39    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  211 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.49u 0.15s 22.64t   Elapsed:  00:00:01
  Total cpu time:  22.49u 0.15s 22.64t   Elapsed:  00:00:01
  Start:  Sat May 11 11:14:32 2013   End:  Sat May 11 11:14:33 2013

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