BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018388
(357 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96MC6|HIAT1_HUMAN Hippocampus abundant transcript 1 protein OS=Homo sapiens GN=HIAT1
PE=2 SV=2
Length = 490
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 145/352 (41%), Gaps = 47/352 (13%)
Query: 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIG 72
+F+ F WG T A T V + P ++G Q + GL + + P+IG
Sbjct: 44 IFLEFFAWGLLT-----APTLVVLHETFP-----KHTFLMNGLIQGVKGLLSFLSAPLIG 93
Query: 73 NLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132
LSD +GRK+ L L + + P+ ++ + S +++A ++ + A+ + AY
Sbjct: 94 ALSDVWGRKSFLLLTVFFTCAPIPLM--KISPWWYFAVISVSGVFAVTFS-----VVFAY 146
Query: 133 VADNISERQRASAFGILLGVLSASFVC----GTLAARFLSTTSAFQAATIVSMLAAAYMR 188
VAD E +R+ A+G++ +AS V G R + AT +++L ++
Sbjct: 147 VADITQEHERSMAYGLVSATFAASLVTSPAIGAYLGRVYGDSLVVVLATAIALLDICFIL 206
Query: 189 VFLKDDVPND-DDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI--PSIRDLICLLRSS 245
V + + +P PI E+ + KK+ SI LIC
Sbjct: 207 VAVPESLPEKMRPASWGAPISWEQAD-----------PFASLKKVGQDSIVLLIC----- 250
Query: 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPL 305
+ F S L E G +SF +L+ F+ A + + G+ I+Q + + L
Sbjct: 251 -------ITVFLSYLPEAGQYSSFFLYLRQIMKFSPESVAAFIAVLGILSIIAQTIVLSL 303
Query: 306 LAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSVS 357
L +G + LGL + + W+ +A A + + P+VS
Sbjct: 304 LMRSIGNKNTILLGLGFQILQLAWYGFGSEPWMMWAAGAVAAMSSITFPAVS 355
>sp|P70187|HIAT1_MOUSE Hippocampus abundant transcript 1 protein OS=Mus musculus GN=Hiat1
PE=2 SV=3
Length = 490
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 145/352 (41%), Gaps = 47/352 (13%)
Query: 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIG 72
+F+ F WG T A T V + P ++G Q + GL + + P+IG
Sbjct: 44 IFLEFFAWGLLT-----APTLVVLHETFP-----KHTFLMNGLIQGVKGLLSFLSAPLIG 93
Query: 73 NLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132
LSD +GRK+ L L + + P+ ++ + S +++A ++ + A+ + AY
Sbjct: 94 ALSDVWGRKSFLLLTVFFTCAPIPLM--KISPWWYFAVISVSGVFAVTFS-----VVFAY 146
Query: 133 VADNISERQRASAFGILLGVLSASFVC----GTLAARFLSTTSAFQAATIVSMLAAAYMR 188
VAD E +R+ A+G++ +AS V G R + AT +++L ++
Sbjct: 147 VADITQEHERSMAYGLVSATFAASLVTSPAIGAYLGRVYGDSLVVVLATAIALLDICFIL 206
Query: 189 VFLKDDVPND-DDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI--PSIRDLICLLRSS 245
V + + +P PI E+ + KK+ SI LIC
Sbjct: 207 VAVPESLPEKMRPASWGAPISWEQAD-----------PFASLKKVGQDSIVLLIC----- 250
Query: 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPL 305
+ F S L E G +SF +L+ F+ A + + G+ I+Q + + L
Sbjct: 251 -------ITVFLSYLPEAGQYSSFFLYLRQIMKFSPESVAAFIAVLGILSIIAQTIVLSL 303
Query: 306 LAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSVS 357
L +G + LGL + + W+ +A A + + P+VS
Sbjct: 304 LMRSIGNKNTILLGLGFQILQLAWYGFGSEPWMMWAAGAVAAMSSITFPAVS 355
>sp|Q8CIA9|HIAL1_MOUSE Hippocampus abundant transcript-like protein 1 OS=Mus musculus
GN=Hiatl1 PE=2 SV=3
Length = 507
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 25/307 (8%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYY 111
++G Q + GL + + P+IG LSD +GRK L + + P+ ++ + Y+
Sbjct: 83 MNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLMRINP-----WWYF 137
Query: 112 ALRTLTAMVCEGSIN-CLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTT 170
+ +++ + S+ + AYVAD E +R++A+G + +AS V +LS
Sbjct: 138 GMISVSGVF---SVTFSVIFAYVADFTQEHERSTAYGWVSATFAASLVSSPAIGTYLSAN 194
Query: 171 SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCK 230
+V+ L A F+ VP + + RP Q + + +K V K
Sbjct: 195 YGDSLVVLVATLVALLDICFILIAVPESLSEKI-RPASWGAQISWKQADPFASLK-KVGK 252
Query: 231 KIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLI 290
S LIC + F S L E G +SF +L+ F + + +
Sbjct: 253 D--STVLLIC------------ITVFLSYLPEAGQYSSFFLYLRQVIGFGSVKIVAFIAM 298
Query: 291 AGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVV 350
G+ ++Q +F+ L LG + LGL + + AW+ +A + +
Sbjct: 299 VGILSIVAQTVFLSKLMRSLGNKNTVLLGLGFQMLQLAWYGFGSQAWMMWAAGTVAAMSS 358
Query: 351 FATPSVS 357
P+VS
Sbjct: 359 ITFPAVS 365
>sp|Q5SR56|HIAL1_HUMAN Hippocampus abundant transcript-like protein 1 OS=Homo sapiens
GN=HIATL1 PE=2 SV=3
Length = 506
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 23/306 (7%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYY 111
++G Q + GL + + P+IG LSD +GRK L + + P+ ++ R S +++A
Sbjct: 81 MNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLM--RISPWWYFAMI 138
Query: 112 ALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
++ + ++ + AYVAD E +R++A+G + +AS V +LS +
Sbjct: 139 SVSGVFSVTF-----SVIFAYVADVTQEHERSTAYGWVSATFAASLVSSPAIGAYLSASY 193
Query: 172 AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKK 231
+V+ + A F+ VP + + RP+ Q + + +K V K
Sbjct: 194 GDSLVVLVATVVALLDICFILVAVPESLPEKM-RPVSWGAQISWKQADPFASLK-KVGKD 251
Query: 232 IPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIA 291
S LIC + F S L E G +SF +L+ F + A + +
Sbjct: 252 --STVLLIC------------ITVFLSYLPEAGQYSSFFLYLRQVIGFGSVKIAAFIAMV 297
Query: 292 GLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVF 351
G+ ++Q F+ +L LG + LGL + + AW+ +A + +
Sbjct: 298 GILSIVAQTAFLSILMRSLGNKNTVLLGLGFQMLQLAWYGFGSQAWMMWAAGTVAAMSSI 357
Query: 352 ATPSVS 357
P++S
Sbjct: 358 TFPAIS 363
>sp|A4IF94|HIAL1_BOVIN Hippocampus abundant transcript-like protein 1 OS=Bos taurus
GN=HIATL1 PE=2 SV=1
Length = 502
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 130/306 (42%), Gaps = 23/306 (7%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYY 111
++G Q + GL + + P+IG LSD +GRK L + + P+ ++ R S +++A
Sbjct: 78 MNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLM--RISPWWYFAMI 135
Query: 112 ALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
++ + ++ + AYVAD E +R++A+G + +AS V +LS +
Sbjct: 136 SISGVFSVTFS-----VIFAYVADVTQEHERSTAYGWVSATFAASLVSSPAIGAYLSASY 190
Query: 172 AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKK 231
+V+ + A F+ VP + + RP+ Q + + +K V K
Sbjct: 191 GDSLVVLVATVVALLDICFILLAVPESLPEKM-RPLSWGARISWKQADPFASLK-KVGKD 248
Query: 232 IPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIA 291
S LIC + F S L E G +SF +L+ F + A + +
Sbjct: 249 --STILLIC------------ITVFLSYLPEAGQYSSFFLYLRQVIGFGSIKIAAFIAMV 294
Query: 292 GLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVF 351
G+ ++Q +F+ L LG + LGL + AW+ +A + +
Sbjct: 295 GILSIVAQTVFLTSLMRSLGNKNTVLLGLGFQMFQLAWYGFGSQAWMMWAAGIVAAVSSI 354
Query: 352 ATPSVS 357
P+VS
Sbjct: 355 TFPAVS 360
>sp|B2RYH9|HIAL1_RAT Hippocampus abundant transcript-like protein 1 OS=Rattus norvegicus
GN=Hiatl1 PE=2 SV=1
Length = 507
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 128/306 (41%), Gaps = 23/306 (7%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYY 111
++G Q + GL + + P+IG LSD +GRK L + + P+ ++ R S +++
Sbjct: 83 MNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLM--RISPWWYFGMI 140
Query: 112 ALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
++ + ++ + AYVAD E +R++A+G + +AS V +LS+
Sbjct: 141 SVSGVFSVTF-----SVIFAYVADFTQEHERSTAYGWVSATFAASLVSSPAIGTYLSSNY 195
Query: 172 AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKK 231
+V+ + A F+ VP + + RP Q + + +K V K
Sbjct: 196 GDSLVVLVATVVALLDICFILVAVPESLPEKI-RPASWGAQISWKQADPFASLK-KVGKD 253
Query: 232 IPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIA 291
S LIC + F S L E G +SF +L+ F + + +
Sbjct: 254 --STVLLIC------------ITVFLSYLPEAGQYSSFFLYLRQVIGFGSVKIVAFIAMV 299
Query: 292 GLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVF 351
G+ ++Q +F+ L LG + LGL + + AW+ +A + +
Sbjct: 300 GILSILAQTVFLSKLMRSLGNKNTVLLGLGFQILQLAWYGFGAQAWMMWAAGTVAAMSSI 359
Query: 352 ATPSVS 357
P+VS
Sbjct: 360 TFPAVS 365
>sp|P02982|TCR1_ECOLX Tetracycline resistance protein, class A OS=Escherichia coli
GN=tetA PE=3 SV=2
Length = 399
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 117/290 (40%), Gaps = 35/290 (12%)
Query: 69 PVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128
PV+G LSD++GR+ +L + L + + AI+A + F + Y R + + G+ +
Sbjct: 61 PVLGALSDRFGRRPVLLVSLAGAAVDYAIMA---TAPFLWVLYIGRIVAGIT--GATGAV 115
Query: 129 ALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSAFQAATIVSMLAAAYMR 188
A AY+AD +RA FG + V G + + S + L
Sbjct: 116 AGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHAPFFAAAAL------ 169
Query: 189 VFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTL 248
+ + LT + E+ P++ + S R +T+
Sbjct: 170 ---------NGLNFLTGCFLLPES----HKGERRPLRREALNPLASFR-----WARGMTV 211
Query: 249 SQAAVVAFFSGLSEGGMQAS-FLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLA 307
A + FF G + A+ ++ F + +FH++ + G+ +++Q + +A
Sbjct: 212 VAALMAVFFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVA 271
Query: 308 PILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSVS 357
LGE + L LG+ A + + + W+ AF ++V+ A+ +
Sbjct: 272 ARLGERRALMLGMIADGTGYILLAFATRGWM-----AFPIMVLLASGGIG 316
>sp|P02980|TCR2_ECOLX Tetracycline resistance protein, class B OS=Escherichia coli
GN=tetA PE=1 SV=1
Length = 401
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 58 AIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLT 117
A+ L ++ P +G +SD++GR+ +L L L + + +LA+ ++ Y L +T
Sbjct: 48 ALYALMQVIFAPWLGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGIT 107
Query: 118 AMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF---LSTTSAFQ 174
G+ +A + +AD S QR FG L + G + F +S S F
Sbjct: 108 -----GATGAVAASVIADTTSASQRVKWFGWLGASFGLGLIAGPIIGGFAGEISPHSPFF 162
Query: 175 AATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIP 233
A +++++ + + ++ D+ D TE + +SNS V I + K +P
Sbjct: 163 IAALLNIVTFLVVMFWFRETKNTRDNTD---------TEVGVETQSNS-VYITLFKTMP 211
>sp|Q07282|TCR5_ECOLX Tetracycline resistance protein, class E OS=Escherichia coli
GN=tetA PE=3 SV=1
Length = 405
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 122/280 (43%), Gaps = 38/280 (13%)
Query: 65 LVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGS 124
++ P++G SD+ GR+ +L L L + + A++A + S + Y R + + G+
Sbjct: 55 VIFAPLLGRWSDRIGRRPVLLLSLLGATLDYALMA---TASVVWVLYLGRLIAGI--TGA 109
Query: 125 INCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF---LSTTSAFQAATIVSM 181
+A + +AD E R FG++ + G + F LS + F A ++
Sbjct: 110 TGAVAASTIADVTPEESRTHWFGMMGACFGGGMIAGPVIGGFAGQLSVQAPFMFAAAING 169
Query: 182 LAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241
LA + +F+ + N + +++E + NE+ S SIR++I
Sbjct: 170 LAF-LVSLFILHETHNANQ-------VSDELKNETINETTS-----------SIREMISP 210
Query: 242 LRSSVTLSQAAVVAFFSGLSEGGMQAS-FLYFLKAQFHFNKNQFADLMLIAGLAGTISQL 300
L +V FF G + A+ ++ F + +F ++ + + GL + Q
Sbjct: 211 L-------SGLLVVFFIIQLIGQIPATLWVLFGEERFAWDGVMVGVSLAVFGLTHALFQG 263
Query: 301 LFMPLLAPILGEAKLLSLGLFAACINMFICSI---SWSAW 337
L +A LGE K +++G+ A +F+ ++ SW W
Sbjct: 264 LAAGFIAKHLGERKAIAVGILADGCGLFLLAVITQSWMVW 303
>sp|P71678|MFS55_MYCTU MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis
GN=Rv1410c PE=1 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|C6DTH3|MFS55_MYCTK MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis
(strain KZN 1435 / MDR) GN=TBMG_02570 PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|A5WM93|MFS55_MYCTF MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis
(strain F11) GN=TBFG_11439 PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|A5U2B2|MFS55_MYCTA MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis
(strain ATCC 25177 / H37Ra) GN=MRA_1419 PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|C1AN55|MFS55_MYCBT MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain
BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=JTY_1446
PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|A1KIJ9|MFS55_MYCBP MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain
BCG / Pasteur 1173P2) GN=BCG_1471c PE=1 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|Q7U042|MFS55_MYCBO MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb1445c PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|P02981|TCR3_ECOLX Tetracycline resistance protein, class C OS=Escherichia coli
GN=tetA PE=1 SV=1
Length = 396
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 69 PVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128
PV+G LSD++GR+ +L L + I AI+A + + YA R + + G+ +
Sbjct: 61 PVLGALSDRFGRRPVLLASLLGATIDYAIMA---TTPVLWILYAGRIVAGI--TGATGAV 115
Query: 129 ALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
A AY+AD RA FG++ V G +A L S
Sbjct: 116 AGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAIS 158
>sp|P51563|TCR7_VIBAN Tetracycline resistance protein, class G OS=Vibrio anguillarum
GN=tetA PE=3 SV=1
Length = 393
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 65 LVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGS 124
+V P++G LSD YGR+ +L L + + I+A S + Y R ++ + G+
Sbjct: 55 VVFAPMLGQLSDSYGRRPVLLASLAGAAVDYTIMA---SAPVLWVLYIGRLVSGV--TGA 109
Query: 125 INCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSA---FQAATIVSM 181
+A + +AD+ E RA FG + A + G L SA F AA +++
Sbjct: 110 TGAVAASTIADSTGEGSRARWFGYMGACYGAGMIAGPALGGMLGGISAHAPFIAAALLNG 169
Query: 182 LAAAYMRVFLKDDVPNDDDDDLTRPI 207
A +FLK+ + +P+
Sbjct: 170 FAFLLACIFLKET--HHSHGGTGKPV 193
>sp|P39843|BMR2_BACSU Multidrug resistance protein 2 OS=Bacillus subtilis (strain 168)
GN=blt PE=3 SV=1
Length = 400
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 114/282 (40%), Gaps = 31/282 (10%)
Query: 54 GFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYAL 113
G+ A + L+ P G D++GRK M+ L L + + I +S FY L
Sbjct: 48 GYLVAAFAISQLITSPFAGRWVDRFGRKKMIILGLLIFSLSELIFGLGTHVSIFYFSRIL 107
Query: 114 RTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSA- 172
++A ++ AYVAD + ++R+ A G + +S F+ G A F++
Sbjct: 108 GGVSAAFIMPAVT----AYVADITTLKERSKAMGYVSAAISTGFIIGPGAGGFIAGFGIR 163
Query: 173 --FQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCK 230
F A+ ++++AA LK+ + ++ L+ + ESN
Sbjct: 164 MPFFFASAIALIAAVTSVFILKESLSIEERHQLSS----------HTKESN--------- 204
Query: 231 KIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLI 290
I+DL + + A ++ F + F F +F F A ++ I
Sbjct: 205 ---FIKDLKRSIHPVYFI--AFIIVFVMAFGLSAYETVFSLFSDHKFGFTPKDIAAIITI 259
Query: 291 AGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI 332
+ + + Q+L L LGE +++ L L I F+ ++
Sbjct: 260 SSIVAVVIQVLLFGKLVNKLGEKRMIQLCLITGAILAFVSTV 301
>sp|Q9D2V8|MFS10_MOUSE Major facilitator superfamily domain-containing protein 10 OS=Mus
musculus GN=Mfsd10 PE=2 SV=1
Length = 456
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 69 PVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128
P+ G SD GR+ ++ L LT I A+ A RS F A+ A R + + +G++N L
Sbjct: 106 PLTGAASDYLGRRPVMMLSLTGLAISYAVWATSRS---FKAFLASRVIGG-ISKGNVN-L 160
Query: 129 ALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSAFQAATIVSMLAAAYMR 188
+ A VAD S R+ ++ S +F G + FLS + + ++ ++
Sbjct: 161 STAIVADLGSPPTRSQGMAVIGVAFSLAFTLGPMLGAFLSVEMVPWISLLFAISDMLFIF 220
Query: 189 VFLKDDVPNDD 199
FL + +P +
Sbjct: 221 CFLPETLPQEK 231
>sp|Q80UJ1|S22AK_MOUSE Solute carrier family 22 member 20 OS=Mus musculus GN=Slc22a20 PE=1
SV=1
Length = 556
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAIL-AYRRSISFFYAY 110
L Q+I G LV + G L+D+ GRKA PL S + LA+ A + F AY
Sbjct: 135 LRDLAQSIYMSGVLVGAALFGGLADRLGRKA----PLVWSYLQLAVSGAATAYVGSFSAY 190
Query: 111 YALRTLTAMVCEGSI-NCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162
R L M G I N L+L V + + R R A GILLG SF G L
Sbjct: 191 CVFRFLMGMTFSGIILNSLSL--VVEWMPTRGRTVA-GILLGF---SFTLGQL 237
>sp|P0A4K5|PMRA_STRR6 Multi-drug resistance efflux pump PmrA OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=pmrA PE=3 SV=1
Length = 399
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 22/164 (13%)
Query: 69 PVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128
P+ G L+D+YGRK M+ I + LA+ +I Y LR L + N
Sbjct: 65 PIWGILADKYGRKPMMIRAGLAMTITMGGLAFVPNI---YWLIFLRLLNGVFAGFVPNAT 121
Query: 129 ALAYVADNISERQRASAF-----GILLGVLSASFVCGTLAARFLSTTSAFQAATIVSMLA 183
AL +A + + + SA G++ G L+ F+ G +A F + F LA
Sbjct: 122 AL--IASQVPKEKSGSALGTLSTGVVAGTLTGPFIGGFIAELF-GIRTVFLLVGSFLFLA 178
Query: 184 AAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIP 227
A F+K+D +P+ E+ + E + VK P
Sbjct: 179 AILTICFIKEDF---------QPVAKEKA--IPTKELFTSVKYP 211
>sp|P0A4K4|PMRA_STRPN Multi-drug resistance efflux pump PmrA OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=pmrA PE=3
SV=1
Length = 399
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 22/164 (13%)
Query: 69 PVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128
P+ G L+D+YGRK M+ I + LA+ +I Y LR L + N
Sbjct: 65 PIWGILADKYGRKPMMIRAGLAMTITMGGLAFVPNI---YWLIFLRLLNGVFAGFVPNAT 121
Query: 129 ALAYVADNISERQRASAF-----GILLGVLSASFVCGTLAARFLSTTSAFQAATIVSMLA 183
AL +A + + + SA G++ G L+ F+ G +A F + F LA
Sbjct: 122 AL--IASQVPKEKSGSALGTLSTGVVAGTLTGPFIGGFIAELF-GIRTVFLLVGSFLFLA 178
Query: 184 AAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIP 227
A F+K+D +P+ E+ + E + VK P
Sbjct: 179 AILTICFIKEDF---------QPVAKEKA--IPTKELFTSVKYP 211
>sp|P39637|YWFA_BACSU Uncharacterized MFS-type transporter YwfA OS=Bacillus subtilis
(strain 168) GN=ywfA PE=3 SV=1
Length = 412
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 4 EKEIKTLSH--------LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGF 55
+IKT H L + VF G +++ P + D +A D LA+ +S
Sbjct: 6 NNDIKTKHHFPLLLALALTMGVFAAGSEELVISPLLPD---LAKAFSSDVSVLALSIS-- 60
Query: 56 QQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRT 115
I G+ + P++ L D+Y R+ L L + II I A ++I FF+ AL
Sbjct: 61 ---IYGVMIFIGAPLLVPLGDKYSRELSLLAGLMIFIIGTVICALAQNIFFFFLGRALSG 117
Query: 116 LTAMVCEGSINCLALAYVADNISERQRASAFGILL---------GVLSASFVCGTLAARF 166
L A G+ A A V D + R G+++ GV SF+ G L R+
Sbjct: 118 LAA----GAFVPTAYAVVGDRVPYTYRGKVMGLIVSSWSLALIFGVPLGSFIGGVLHWRW 173
>sp|Q9R1U7|S22A8_RAT Solute carrier family 22 member 8 OS=Rattus norvegicus GN=Slc22a8
PE=2 SV=1
Length = 536
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85
Q+I G LV PVIG LSD++GRK +LT
Sbjct: 126 QSIFMAGILVGGPVIGELSDRFGRKPILT 154
>sp|P33449|BMR1_BACSU Multidrug resistance protein 1 OS=Bacillus subtilis (strain 168)
GN=bmr PE=3 SV=2
Length = 389
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 12/145 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
MEK+ TL+ L +F+ +V+P + ++E L+ G+ A +
Sbjct: 1 MEKKNITLTILLTNLFIAFLGIGLVIPVTPTI--------MNELHLSGTAVGYMVACFAI 52
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
L++ P+ G D++GRK M+ + L + + +++ + L ++A
Sbjct: 53 TQLIVSPIAGRWVDRFGRKIMIVIGLLFFSVSEFLFGIGKTVEMLFISRMLGGISAAFIM 112
Query: 123 GSINCLALAYVADNISERQRASAFG 147
+ A++AD + + R A G
Sbjct: 113 PGVT----AFIADITTIKTRPKALG 133
>sp|P33733|TCR4_SALOR Tetracycline resistance protein, class D OS=Salmonella ordonez
GN=tetA PE=3 SV=1
Length = 394
Score = 35.8 bits (81), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 13/142 (9%)
Query: 69 PVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128
P++G SD+ GR+ +L L L + +LA + Y + +T G+ +
Sbjct: 59 PLLGRWSDKLGRRPVLLLSLAGAAFDYTLLALSNVLWMLYLGRIISGIT-----GATGAV 113
Query: 129 ALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSAFQAATIVSML-AAAYM 187
A + VAD+ + +R + FG L A + G S I ++L A ++
Sbjct: 114 AASVVADSTAVSERTAWFGRLGAAFGAGLIAGPAIGGLAGDISPHLPFVIAAILNACTFL 173
Query: 188 RVFL-------KDDVPNDDDDD 202
VF ++ P D+ +
Sbjct: 174 MVFFIFKPAVQTEEKPADEKQE 195
>sp|P57538|Y466_BUCAI Uncharacterized transporter BU466 OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=BU466 PE=3 SV=1
Length = 390
Score = 35.0 bits (79), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 20/185 (10%)
Query: 23 ATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA 82
M++P ++ M L G ++ +L G I G+ ++ G LSD++ RK
Sbjct: 22 GMFMILPILSKYGM--LLDGGNK-----FLIGLSMGIYGISQVIFQIPFGILSDKFNRKK 74
Query: 83 MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQR 142
++ L L + I I A SI + L G+I+ + +A+++D I E R
Sbjct: 75 IILLGLFMFFIGNIISASIHSI------WGLIIGRFFQGSGAISGVCMAFLSDLIREENR 128
Query: 143 ASAFGILLGVLSASF----VCGTLAARFLSTTSAFQAA---TIVSMLAAAYMRVFLKDDV 195
+ + + SF V G + + S F + +IV M+ + F K ++
Sbjct: 129 VKSIAAIGVSFAISFLIAVVSGPIIVHYFGFFSIFWISAFLSIVCMIIVCFFVPFSKKNI 188
Query: 196 PNDDD 200
+
Sbjct: 189 LKQNK 193
>sp|A2BWM0|ARGC_PROM5 N-acetyl-gamma-glutamyl-phosphate reductase OS=Prochlorococcus
marinus (strain MIT 9515) GN=argC PE=3 SV=1
Length = 351
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Query: 174 QAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSP-VKIPVCKKI 232
Q I S AA Y R DDDDL + + E N++ S + + P C
Sbjct: 108 QWKRIYSNEAAKYKR----------DDDDLCKEAVYGLPEINNKDISKARLIACPGCYPT 157
Query: 233 PSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQAS-FLYF------LKAQFHFNKNQFA 285
++ LI L + ++ ++ SG S GG ++S L F L A N +
Sbjct: 158 SALIPLIPFLSQGIIDNEGIIIDSKSGTSGGGRESSQKLLFSECGDGLSAYGLINHRHTS 217
Query: 286 DLMLIAG-LAGTISQLLFMPLLAPIL 310
++ IA ++G +LLF P L P++
Sbjct: 218 EIEQIASFISGNDIELLFTPHLLPMI 243
>sp|F4IKF6|SPNS3_ARATH Probable sphingolipid transporter spinster homolog 3 OS=Arabidopsis
thaliana GN=At2g22730 PE=3 SV=1
Length = 510
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 140/343 (40%), Gaps = 45/343 (13%)
Query: 40 CPGLDECSLA------IYLSGFQQAIIG----LGTLVMMPVIGNLSDQYGRKAMLTLPLT 89
C +C+LA LS F+ ++ +G L+ P+ +L+ + + +
Sbjct: 81 CNDKGKCTLATGIQGHFNLSNFEDGVLSSSFMVGLLIASPIFASLAKR-------LIGVG 133
Query: 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGIL 149
L++ +A+L S +F++ L + V E S LA ++ DN + Q+A+ G+
Sbjct: 134 LTVWTIAVLGCGSSFAFWFI--VLCRMFVGVGEASFISLAAPFIDDNAPQEQKAAWLGLF 191
Query: 150 LGVLSA----SFVCGTLAARFLSTTSAFQAATIVSMLAAAYMRVFLK-------DDVPND 198
+ + +V G + S AF ++ M A + +K + + N+
Sbjct: 192 YMCIPSGVALGYVYGGYVGKHFSWRYAFWGEAVL-MAPFAVLGFLMKPLQLKGSETLKNN 250
Query: 199 DDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI-RDLICLLRSSVTLSQAAVVAFF 257
+ + I ++ E V+ S S V K +D+ L + V VV
Sbjct: 251 NRLQVDNEIEHDQFE-VSIETSKSSYANAVFKSFTGFAKDMKVLYKEKVF-----VVNVL 304
Query: 258 SGLSEGGMQASFLYF-LKAQFHFNKNQFADLM-----LIAGLAGTISQLLFMPLLAPILG 311
+S + ++ Y+ KA ++ K + AD++ +I G+ GT+S + + +
Sbjct: 305 GYVSYNFVIGAYSYWGPKAGYNIYKMKNADMIFGAVTIICGIVGTLSGGFILDRVTATIP 364
Query: 312 EA-KLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFAT 353
A KLLS F + F S + A A L+VFAT
Sbjct: 365 NAFKLLSGATFLGAVFCFTAFTLKSLYGFIALFALGELLVFAT 407
>sp|O88909|S22A8_MOUSE Solute carrier family 22 member 8 OS=Mus musculus GN=Slc22a8 PE=2
SV=2
Length = 537
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85
Q++ G LV PV G LSD++GRK +LT
Sbjct: 126 QSVFMAGILVGGPVFGELSDRFGRKPILT 154
>sp|Q6GIU7|NORA_STAAR Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
MRSA252) GN=norA PE=3 SV=1
Length = 388
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADVSPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|Q5HHX4|NORA_STAAC Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
COL) GN=norA PE=3 SV=1
Length = 388
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|P0A0J6|NORA_STAAW Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
MW2) GN=norA PE=3 SV=1
Length = 388
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|P0A0J7|NORA_STAAU Quinolone resistance protein NorA OS=Staphylococcus aureus GN=norA
PE=3 SV=1
Length = 388
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|P0A0J5|NORA_STAAN Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
N315) GN=norA PE=3 SV=1
Length = 388
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|P0A0J4|NORA_STAAM Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=norA PE=3 SV=1
Length = 388
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|Q6GBD5|NORA_STAAS Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
MSSA476) GN=norA PE=3 SV=1
Length = 388
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|P37498|YYBF_BACSU Uncharacterized MFS-type transporter YybF OS=Bacillus subtilis
(strain 168) GN=yybF PE=3 SV=1
Length = 404
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 66 VMMPVIGNLSDQYGRKAMLTLP-LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGS 124
V M V G+LS+ +GRK ++ + L S++ LA A+ S F+ LRT+ + G
Sbjct: 63 VSMLVFGSLSEVWGRKPIMGISMLAASVLCLAS-AFSPS---FHTLLVLRTIQGVALAG- 117
Query: 125 INCLALAYVADNISERQRASAFGIL-----LGVLSASFVCGTLAARFLSTTSAFQAATIV 179
+ +A+AY+ + I SA G+ +G + V G L + +L+ A ++
Sbjct: 118 LPSIAMAYLGEEIEPGSLGSAMGLYISGNAIGAVFGRIVSGLL-SEYLNWHMAMGTIGVI 176
Query: 180 SMLAA 184
S++A+
Sbjct: 177 SLIAS 181
>sp|O31563|YFIU_BACSU Uncharacterized MFS-type transporter YfiU OS=Bacillus subtilis
(strain 168) GN=yfiU PE=3 SV=1
Length = 518
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90
LG V +P++G LSD+YGRK + + + L
Sbjct: 59 LGLSVSVPIVGKLSDRYGRKKLFLIEVCL 87
>sp|A6QLW8|S22A7_BOVIN Solute carrier family 22 member 7 OS=Bos taurus GN=SLC22A7 PE=2
SV=1
Length = 547
Score = 32.3 bits (72), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 45 ECSLAIYLSGFQQAIIGL---GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101
E L G +AI G LV V G LSD++GR+ +L + S+ L
Sbjct: 132 EWDLVCEQKGLNKAISTFFFAGVLVGAEVYGYLSDRFGRRRLLLVAYVSSL----ALGLA 187
Query: 102 RSISFFYAYYAL-RTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160
+ S Y +A+ RTLT M G + + + + R R A GVLS++F G
Sbjct: 188 SAASVSYIMFAITRTLTGMALAG-FTIIVMPLELEWLDVRHRTVA-----GVLSSTFWTG 241
>sp|D2BX50|MDTG_DICD5 Multidrug resistance protein MdtG OS=Dickeya dadantii (strain
Ech586) GN=mdtG PE=3 SV=1
Length = 408
Score = 32.3 bits (72), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIG 72
LFVT + AT V P +T + + L D + ++SG AI G+ L+ P +G
Sbjct: 221 LFVTTLIIQVATGSVAPILT-LYVRELAGQTDNLA---FISGAIAAIPGVSALLSAPRLG 276
Query: 73 NLSDQYGRKAMLTLPLTLSIIPLAILAYRRS 103
L D+ G + +L L LS++ L +A+ +S
Sbjct: 277 KLGDKIGPERILVAMLILSVLLLIPMAFVQS 307
>sp|Q8K902|Y567_BUCAP Uncharacterized transporter BUsg_567 OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=BUsg_567 PE=3 SV=1
Length = 413
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 8 KTLSHLFVTVFLWGFATMMV---VPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGT 64
K + + +++FL GF++ + V +I V C E SL+ LS A + +GT
Sbjct: 32 KKFNQIVLSLFLGGFSSFSILYCVQSILPVFSKQFCLTATESSLS--LSA-ATATMSIGT 88
Query: 65 LVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYA-LRTLTAMVCEG 123
L IG LSD+ GRK++++ L ++ A+L SIS + LR LT + G
Sbjct: 89 LF----IGPLSDRIGRKSIMSSSLLIA----AVLTIICSISNNWTVIVFLRALTGLALSG 140
Query: 124 SINCLALAYVADNISERQRASAFGIL-----LGVLSASFVCGTLAARFLSTTSAFQAATI 178
+ +A+ Y+ + + + G+ +G S + ++ A + S AF
Sbjct: 141 VV-AVAMTYIVEEVHPNSVSFCMGLYISGNTIGGCSGR-ILSSILAEYFSWHIAFIVIGF 198
Query: 179 VSMLAAAYMRVFL---KDDVPNDDDDD 202
S++++ FL K+ P D +
Sbjct: 199 FSLMSSCLFLYFLPSSKNFYPISIDFN 225
>sp|P46499|YLX3_CAEEL Uncharacterized protein F23F12.3 OS=Caenorhabditis elegans
GN=F23F12.3/F23F12.1 PE=3 SV=3
Length = 522
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 46 CSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSIS 105
C Y S + I +G LV V G+L D +GRK + + +++ II + S
Sbjct: 89 CGTKAYDSAWIATIQFIGALVGALVYGHLGDHFGRKPVSFVGISIGIIFGVASGFAPSWE 148
Query: 106 FFYAYYALRTLTAMVCEGSINCLAL---AYVADNISERQR 142
F + +C S+ C+ + AY+ + I QR
Sbjct: 149 VF-------AVLLFICGTSVACIMIVFYAYILEFIEPEQR 181
>sp|Q92367|AAP1_SCHPO Amino-acid permease 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=aap1 PE=3 SV=1
Length = 594
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 19/156 (12%)
Query: 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGV 152
IP +L Y+ S + +YY + +C AL Y++ ++ SA+G +
Sbjct: 450 IPDTVLPYKFPGSVYLSYYGVLINFLALC-------ALVYISIFPVTHEKPSAYGFFVSF 502
Query: 153 LSASFVCGTLAARFLSTTSAFQAATIVSMLAAAY----MRVFLKDDVPND-DDDDLTRPI 207
L S L + FQ+ V + Y ++++ + ++ + DLT+P
Sbjct: 503 LGPSVFIAYLLISPIFVKPTFQSLKDVDLTTGRYDLVNSQMYVAESSTSELSEKDLTKPN 562
Query: 208 ITEETEGVNQN-ESNSPVKIPVCKK--IPSIRDLIC 240
+ +++ ESN+P + KK + + D +C
Sbjct: 563 LQSNDNKNSEDLESNTPPQ----KKSALQKVADFLC 594
>sp|Q0P5M9|MFS10_BOVIN Major facilitator superfamily domain-containing protein 10 OS=Bos
taurus GN=MFSD10 PE=2 SV=1
Length = 456
Score = 32.0 bits (71), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 5/151 (3%)
Query: 49 AIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFY 108
++ G ++ L + P+ G LSD GR+ + L L A+ A +S F
Sbjct: 86 SVLFGGLIGSVFSLLQFLSAPLTGALSDCLGRRPGMLLSLAGVATSYAVWAASKS---FA 142
Query: 109 AYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLS 168
A+ A R + + +G+++ L A VAD S R+ ++ S F G FL
Sbjct: 143 AFLASRVIGG-ISKGNVS-LCTAIVADLGSPSARSKGMAVIGVAFSLGFTLGPTLGAFLP 200
Query: 169 TTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199
+ + A + ++ ++ FL + +P +
Sbjct: 201 SETVPWLALLFAVSDLLFIWCFLPETLPPEK 231
>sp|A8WGF7|SPNS1_XENTR Protein spinster homolog 1 OS=Xenopus tropicalis GN=spns1 PE=2 SV=2
Length = 526
Score = 32.0 bits (71), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYA 112
SG Q + + + PV G L D+Y RK ++ + ++ + + +L+ S +F+ +
Sbjct: 97 SGLVQTVFICSYMFLAPVFGYLGDRYNRKLIMCIGISFWSL-VTLLSSFVSKQYFWLFLL 155
Query: 113 LRTLTAMVCEGSINCLALAYVADNISERQR---------ASAFGILLGVLSASFVCGT 161
R L V E S + +A +AD QR A+ G LG ++ S V T
Sbjct: 156 TRGLVG-VGEASYSTIAPTIIADLFLADQRSRMLSFFYFATPVGCGLGYIAGSKVTST 212
>sp|Q921Y4|MFSD5_MOUSE Major facilitator superfamily domain-containing protein 5 OS=Mus
musculus GN=Mfsd5 PE=2 SV=1
Length = 450
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 256 FFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK- 314
+F L+ +QA +LY L +HF + Q A ++ + GLA T+ L L LG K
Sbjct: 49 YFLALAADWLQAPYLYKLYQHYHFLEGQIA-ILYVCGLASTVLFGLVASSLVDWLGRKKS 107
Query: 315 --LLSLGLFAACIN 326
L SL CI
Sbjct: 108 CVLFSLTYSLCCIT 121
>sp|P51564|TCR8_PASMD Tetracycline resistance protein, class H OS=Pasteurella multocida
GN=tetA PE=3 SV=1
Length = 400
Score = 31.6 bits (70), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 43 LDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102
+ E SLA + G A+ ++ P++G LSD+YGRK +L L + + ++A+
Sbjct: 34 VSENSLATHY-GVLLALYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFST 92
Query: 103 SISFFY 108
++ Y
Sbjct: 93 TLWMLY 98
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,019,231
Number of Sequences: 539616
Number of extensions: 4329410
Number of successful extensions: 15661
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 15565
Number of HSP's gapped (non-prelim): 204
length of query: 357
length of database: 191,569,459
effective HSP length: 119
effective length of query: 238
effective length of database: 127,355,155
effective search space: 30310526890
effective search space used: 30310526890
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)