Query 018388
Match_columns 357
No_of_seqs 444 out of 1310
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 08:36:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018388.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018388hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 2.6E-33 5.6E-38 239.7 33.1 285 7-337 12-300 (394)
2 PRK14995 methyl viologen resis 100.0 2.3E-32 5E-37 250.7 30.1 336 4-354 2-370 (495)
3 PRK03545 putative arabinose tr 100.0 2.2E-31 4.7E-36 237.8 33.8 294 10-351 11-310 (390)
4 TIGR02332 HpaX 4-hydroxyphenyl 100.0 6.3E-31 1.4E-35 235.8 29.8 305 7-327 7-324 (412)
5 TIGR00900 2A0121 H+ Antiporter 100.0 1.8E-30 3.8E-35 230.0 31.5 306 12-354 3-320 (365)
6 TIGR00710 efflux_Bcr_CflA drug 100.0 5E-30 1.1E-34 228.8 33.1 285 6-332 3-291 (385)
7 PRK10091 MFS transport protein 100.0 6E-30 1.3E-34 227.7 32.2 279 7-332 2-284 (382)
8 COG2271 UhpC Sugar phosphate p 100.0 1.7E-30 3.7E-35 219.6 26.8 320 10-352 31-361 (448)
9 PRK10213 nepI ribonucleoside t 100.0 8.3E-30 1.8E-34 227.2 32.9 293 14-354 26-324 (394)
10 TIGR00711 efflux_EmrB drug res 100.0 2.1E-30 4.6E-35 238.3 28.1 330 9-353 3-366 (485)
11 PF07690 MFS_1: Major Facilita 100.0 1.6E-30 3.5E-35 229.1 24.3 310 13-355 1-319 (352)
12 PRK15402 multidrug efflux syst 100.0 3.5E-29 7.6E-34 224.8 32.4 302 13-355 18-329 (406)
13 PRK11195 lysophospholipid tran 100.0 2.6E-29 5.6E-34 224.0 30.9 306 8-354 3-312 (393)
14 PRK10133 L-fucose transporter; 100.0 6.4E-29 1.4E-33 223.9 33.2 307 9-356 27-368 (438)
15 PRK11551 putative 3-hydroxyphe 100.0 6.7E-29 1.5E-33 223.1 32.3 300 10-348 17-321 (406)
16 PRK11663 regulatory protein Uh 100.0 8.3E-29 1.8E-33 223.9 32.6 277 10-310 25-306 (434)
17 PRK03699 putative transporter; 100.0 4.7E-29 1E-33 222.9 30.6 300 5-350 4-309 (394)
18 PRK10473 multidrug efflux syst 100.0 1.1E-28 2.3E-33 220.7 32.9 287 8-337 3-293 (392)
19 PRK11646 multidrug resistance 100.0 1.4E-28 3.1E-33 219.7 33.7 301 11-355 13-317 (400)
20 PRK09705 cynX putative cyanate 100.0 4.1E-29 8.9E-34 222.9 30.0 281 25-354 26-311 (393)
21 PRK15403 multidrug efflux syst 100.0 7.5E-29 1.6E-33 222.4 31.6 301 14-355 22-332 (413)
22 PRK03633 putative MFS family t 100.0 6.2E-29 1.3E-33 221.2 30.1 279 3-330 1-282 (381)
23 TIGR00886 2A0108 nitrite extru 100.0 1.2E-28 2.5E-33 218.5 31.6 293 9-332 2-310 (366)
24 PRK09556 uhpT sugar phosphate 100.0 2.1E-29 4.5E-34 229.9 27.1 291 12-325 33-336 (467)
25 TIGR00899 2A0120 sugar efflux 100.0 1.5E-28 3.4E-33 218.5 30.9 295 14-352 3-305 (375)
26 TIGR00891 2A0112 putative sial 100.0 6.5E-29 1.4E-33 223.2 28.5 300 7-326 11-317 (405)
27 TIGR00893 2A0114 d-galactonate 100.0 3.1E-29 6.7E-34 224.4 26.1 275 18-314 4-282 (399)
28 TIGR00903 2A0129 major facilit 100.0 4.6E-28 1E-32 213.1 31.5 270 20-336 3-280 (368)
29 PRK10642 proline/glycine betai 100.0 5.3E-28 1.2E-32 221.7 32.9 295 7-324 15-327 (490)
30 PRK09874 drug efflux system pr 100.0 1.4E-27 3E-32 214.8 34.1 311 5-354 11-330 (408)
31 TIGR00885 fucP L-fucose:H+ sym 100.0 8.9E-28 1.9E-32 214.7 32.4 308 9-356 4-342 (410)
32 PRK12307 putative sialic acid 100.0 7.3E-28 1.6E-32 217.8 32.2 292 7-332 17-315 (426)
33 PRK10406 alpha-ketoglutarate t 100.0 1.2E-27 2.5E-32 216.3 33.3 279 10-324 24-320 (432)
34 TIGR00895 2A0115 benzoate tran 100.0 2E-28 4.3E-33 219.4 28.1 328 11-354 20-357 (398)
35 PRK11652 emrD multidrug resist 100.0 9.5E-28 2.1E-32 214.7 32.0 269 1-313 1-273 (394)
36 PRK10504 putative transporter; 100.0 6.9E-28 1.5E-32 220.6 31.7 311 7-333 9-347 (471)
37 TIGR00890 2A0111 Oxalate/Forma 100.0 4.7E-28 1E-32 215.4 29.5 270 24-335 19-292 (377)
38 PRK10054 putative transporter; 100.0 2.8E-28 6.2E-33 217.5 27.7 306 7-355 6-318 (395)
39 PRK09952 shikimate transporter 100.0 1.4E-27 3E-32 215.9 32.4 292 7-327 21-330 (438)
40 TIGR00897 2A0118 polyol permea 100.0 2.5E-27 5.3E-32 212.3 33.4 272 6-317 11-291 (402)
41 PRK05122 major facilitator sup 100.0 8E-28 1.7E-32 215.6 30.1 301 5-355 12-322 (399)
42 PLN00028 nitrate transmembrane 100.0 1.9E-27 4.2E-32 216.9 32.9 270 8-313 36-318 (476)
43 COG2223 NarK Nitrate/nitrite t 100.0 1.1E-27 2.5E-32 202.8 28.9 287 6-334 12-305 (417)
44 PRK10489 enterobactin exporter 100.0 1.1E-27 2.4E-32 215.7 30.3 304 7-352 16-329 (417)
45 TIGR00881 2A0104 phosphoglycer 100.0 3.7E-28 8E-33 216.2 25.9 272 17-311 4-280 (379)
46 PRK11102 bicyclomycin/multidru 100.0 1.6E-27 3.4E-32 212.1 29.9 265 21-325 4-272 (377)
47 PRK15075 citrate-proton sympor 100.0 4.8E-27 1E-31 212.5 31.7 284 5-323 12-314 (434)
48 PRK10077 xylE D-xylose transpo 100.0 3.8E-28 8.2E-33 222.9 24.8 312 9-332 13-355 (479)
49 PRK12382 putative transporter; 100.0 3.3E-27 7.2E-32 211.1 30.1 300 6-355 13-322 (392)
50 PRK11273 glpT sn-glycerol-3-ph 100.0 7.4E-27 1.6E-31 212.2 32.3 255 47-314 59-322 (452)
51 PRK11043 putative transporter; 100.0 2.3E-26 5E-31 206.3 34.4 270 10-326 8-281 (401)
52 TIGR01299 synapt_SV2 synaptic 100.0 3.6E-27 7.8E-32 220.9 27.8 173 12-197 171-360 (742)
53 TIGR00894 2A0114euk Na(+)-depe 100.0 2.9E-27 6.4E-32 216.0 26.6 285 11-313 22-327 (465)
54 TIGR00712 glpT glycerol-3-phos 100.0 3.2E-26 7E-31 207.3 32.5 254 47-313 57-317 (438)
55 PRK15034 nitrate/nitrite trans 100.0 9.7E-26 2.1E-30 200.0 33.3 272 7-328 33-331 (462)
56 PRK15011 sugar efflux transpor 100.0 8.2E-26 1.8E-30 201.9 32.1 286 7-337 14-306 (393)
57 KOG2532 Permease of the major 100.0 3.3E-27 7.2E-32 210.7 22.6 278 43-336 65-356 (466)
58 TIGR00902 2A0127 phenyl propri 100.0 5.1E-26 1.1E-30 202.4 29.9 300 10-354 6-312 (382)
59 TIGR00879 SP MFS transporter, 100.0 5E-27 1.1E-31 215.4 24.2 312 16-331 36-367 (481)
60 TIGR00887 2A0109 phosphate:H+ 100.0 4.7E-26 1E-30 209.7 29.5 317 9-332 17-384 (502)
61 TIGR00901 2A0125 AmpG-related 100.0 5.4E-26 1.2E-30 200.7 28.6 268 25-332 5-294 (356)
62 TIGR00896 CynX cyanate transpo 100.0 2.7E-26 5.9E-31 202.4 26.6 285 22-355 14-305 (355)
63 PF05977 MFS_3: Transmembrane 100.0 8.3E-26 1.8E-30 205.1 29.9 309 6-351 8-323 (524)
64 KOG1330 Sugar transporter/spin 100.0 1.2E-27 2.6E-32 204.3 15.9 273 5-310 30-310 (493)
65 cd06174 MFS The Major Facilita 100.0 2.3E-25 4.9E-30 196.1 29.9 277 12-355 3-285 (352)
66 PRK03893 putative sialic acid 100.0 3.2E-25 6.8E-30 204.5 31.8 302 7-332 19-360 (496)
67 TIGR00898 2A0119 cation transp 100.0 1.9E-26 4E-31 213.0 23.2 280 43-336 116-408 (505)
68 PRK11128 putative 3-phenylprop 100.0 1.6E-25 3.6E-30 199.2 28.5 292 16-354 12-312 (382)
69 PRK08633 2-acyl-glycerophospho 100.0 1.8E-25 3.9E-30 225.6 31.3 317 6-354 7-341 (1146)
70 TIGR00883 2A0106 metabolite-pr 99.9 5.1E-25 1.1E-29 197.0 30.0 275 18-323 3-295 (394)
71 KOG2615 Permease of the major 99.9 1.7E-26 3.8E-31 192.0 18.0 309 28-356 45-373 (451)
72 TIGR00805 oat sodium-independe 99.9 6.5E-26 1.4E-30 211.8 23.9 298 16-329 41-415 (633)
73 PRK06814 acylglycerophosphoeth 99.9 3.5E-25 7.7E-30 222.8 30.7 290 7-328 10-306 (1140)
74 TIGR00882 2A0105 oligosacchari 99.9 1.3E-24 2.8E-29 194.6 29.8 300 8-341 2-312 (396)
75 TIGR00892 2A0113 monocarboxyla 99.9 1.6E-24 3.4E-29 196.8 30.5 294 45-354 48-352 (455)
76 PRK09528 lacY galactoside perm 99.9 9.5E-25 2.1E-29 196.9 27.3 310 7-350 9-330 (420)
77 PRK11010 ampG muropeptide tran 99.9 7.7E-24 1.7E-28 193.6 33.2 280 7-326 11-302 (491)
78 COG0738 FucP Fucose permease [ 99.9 8E-24 1.7E-28 178.4 30.3 308 9-356 14-345 (422)
79 PRK11902 ampG muropeptide tran 99.9 7.4E-24 1.6E-28 189.9 31.4 274 14-327 5-290 (402)
80 KOG3764 Vesicular amine transp 99.9 5.8E-27 1.2E-31 196.0 10.1 295 10-341 23-366 (464)
81 KOG0569 Permease of the major 99.9 4.4E-24 9.6E-29 188.6 25.6 281 43-332 53-354 (485)
82 KOG2533 Permease of the major 99.9 3.1E-24 6.7E-29 192.1 22.6 277 44-334 74-365 (495)
83 TIGR00889 2A0110 nucleoside tr 99.9 2.7E-22 5.8E-27 180.2 29.9 276 12-333 6-301 (418)
84 TIGR00792 gph sugar (Glycoside 99.9 8.8E-23 1.9E-27 185.3 26.2 298 18-352 9-328 (437)
85 TIGR00924 yjdL_sub1_fam amino 99.9 6.3E-22 1.4E-26 180.2 31.2 339 5-355 7-401 (475)
86 KOG0254 Predicted transporter 99.9 4.7E-23 1E-27 189.9 20.9 299 25-332 64-378 (513)
87 PRK10207 dipeptide/tripeptide 99.9 1.4E-21 3.1E-26 178.0 28.9 341 2-355 8-399 (489)
88 TIGR02718 sider_RhtX_FptX side 99.9 1E-20 2.2E-25 169.1 31.3 275 10-325 3-286 (390)
89 TIGR00806 rfc RFC reduced fola 99.9 1.1E-20 2.5E-25 164.9 30.5 297 45-349 55-367 (511)
90 KOG0255 Synaptic vesicle trans 99.9 1.5E-21 3.3E-26 180.8 22.8 279 46-336 113-403 (521)
91 TIGR01301 GPH_sucrose GPH fami 99.9 4.8E-20 1E-24 164.9 31.0 299 8-332 4-355 (477)
92 PF06609 TRI12: Fungal trichot 99.9 7.9E-20 1.7E-24 165.9 29.6 293 24-332 60-399 (599)
93 COG2807 CynX Cyanate permease 99.9 7.2E-20 1.6E-24 152.4 26.8 295 11-354 11-315 (395)
94 PRK10429 melibiose:sodium symp 99.9 6.9E-20 1.5E-24 167.4 27.9 284 12-330 10-313 (473)
95 PRK09584 tppB putative tripept 99.9 2E-19 4.2E-24 164.9 29.6 336 7-355 20-402 (500)
96 PF13347 MFS_2: MFS/sugar tran 99.9 2.5E-20 5.5E-25 168.4 22.0 295 22-354 15-334 (428)
97 PF00083 Sugar_tr: Sugar (and 99.9 2.1E-25 4.6E-30 203.2 -11.6 305 14-331 6-334 (451)
98 KOG2504 Monocarboxylate transp 99.9 1.5E-19 3.2E-24 163.8 24.5 298 47-351 77-404 (509)
99 PF01306 LacY_symp: LacY proto 99.9 1.9E-18 4E-23 150.2 29.5 304 5-342 4-318 (412)
100 PRK09669 putative symporter Ya 99.9 5.2E-19 1.1E-23 160.6 27.2 300 15-354 16-338 (444)
101 KOG0252 Inorganic phosphate tr 99.9 1.2E-20 2.6E-25 161.2 15.1 322 11-335 44-400 (538)
102 PRK09848 glucuronide transport 99.9 7.6E-19 1.7E-23 159.8 28.0 306 9-354 9-338 (448)
103 PF03825 Nuc_H_symport: Nucleo 99.8 5.2E-18 1.1E-22 150.0 29.8 283 13-338 7-299 (400)
104 KOG2816 Predicted transporter 99.8 1.9E-18 4.1E-23 154.0 23.7 324 11-356 21-351 (463)
105 COG2211 MelB Na+/melibiose sym 99.8 1.2E-17 2.5E-22 146.7 27.9 310 10-354 14-346 (467)
106 PF11700 ATG22: Vacuole efflux 99.8 6.5E-17 1.4E-21 145.8 31.4 281 50-354 69-399 (477)
107 PTZ00207 hypothetical protein; 99.8 1.5E-17 3.2E-22 152.1 27.6 145 45-195 56-209 (591)
108 TIGR01272 gluP glucose/galacto 99.8 6.4E-18 1.4E-22 145.4 22.3 218 107-355 10-250 (310)
109 PRK11462 putative transporter; 99.8 1.7E-16 3.6E-21 144.3 31.1 271 14-325 15-305 (460)
110 KOG2325 Predicted transporter/ 99.8 1.3E-17 2.9E-22 146.7 20.1 253 6-288 32-304 (488)
111 KOG0253 Synaptic vesicle trans 99.8 1.9E-16 4E-21 132.0 23.7 157 44-207 106-266 (528)
112 PRK15462 dipeptide/tripeptide 99.8 1.2E-15 2.5E-20 137.5 29.8 167 6-182 7-180 (493)
113 COG2270 Permeases of the major 99.8 1.7E-16 3.6E-21 135.4 22.5 304 24-352 31-358 (438)
114 PF03209 PUCC: PUCC protein; 99.8 5.3E-15 1.1E-19 126.6 30.2 279 45-352 9-318 (403)
115 TIGR00788 fbt folate/biopterin 99.7 7.6E-16 1.7E-20 140.1 22.4 293 10-330 28-335 (468)
116 PF05631 DUF791: Protein of un 99.7 7E-14 1.5E-18 118.0 27.9 274 14-330 40-326 (354)
117 PF03137 OATP: Organic Anion T 99.7 1.1E-17 2.5E-22 152.7 0.0 283 43-327 30-388 (539)
118 TIGR00880 2_A_01_02 Multidrug 99.7 1.3E-15 2.7E-20 115.5 11.0 132 58-193 5-140 (141)
119 TIGR00889 2A0110 nucleoside tr 99.7 1.7E-14 3.7E-19 129.7 19.8 185 11-197 211-408 (418)
120 KOG3626 Organic anion transpor 99.6 2.3E-14 5E-19 131.6 19.3 278 43-327 124-475 (735)
121 PRK10642 proline/glycine betai 99.6 3.5E-14 7.6E-19 130.6 20.7 167 20-198 262-436 (490)
122 TIGR01299 synapt_SV2 synaptic 99.6 9.9E-14 2.1E-18 131.0 21.5 139 53-196 597-738 (742)
123 KOG2563 Permease of the major 99.6 7.3E-13 1.6E-17 114.1 24.3 279 49-354 77-378 (480)
124 PRK09874 drug efflux system pr 99.6 2E-13 4.3E-18 122.9 19.6 170 17-194 228-401 (408)
125 PRK09528 lacY galactoside perm 99.6 5.3E-14 1.1E-18 127.1 15.8 164 25-196 240-408 (420)
126 PRK15011 sugar efflux transpor 99.5 1.1E-12 2.3E-17 117.5 19.8 163 18-193 226-392 (393)
127 PRK05122 major facilitator sup 99.5 1.3E-12 2.8E-17 117.3 19.9 159 20-193 228-390 (399)
128 cd06174 MFS The Major Facilita 99.5 7.1E-13 1.5E-17 116.5 17.6 168 9-187 176-348 (352)
129 PRK11551 putative 3-hydroxyphe 99.5 1.3E-12 2.7E-17 117.6 18.7 160 18-189 230-394 (406)
130 PRK10489 enterobactin exporter 99.5 1.7E-12 3.6E-17 117.2 19.4 161 27-198 242-406 (417)
131 TIGR00892 2A0113 monocarboxyla 99.5 2.7E-13 5.7E-18 123.5 13.6 165 9-185 242-415 (455)
132 COG3104 PTR2 Dipeptide/tripept 99.5 2.5E-11 5.4E-16 106.4 24.3 173 7-186 20-201 (498)
133 TIGR00890 2A0111 Oxalate/Forma 99.5 9E-13 2E-17 117.1 15.8 164 10-183 207-374 (377)
134 PRK03893 putative sialic acid 99.5 2.2E-12 4.7E-17 119.3 18.7 144 27-179 294-441 (496)
135 TIGR00902 2A0127 phenyl propri 99.5 3.6E-12 7.9E-17 113.6 18.9 164 7-184 204-372 (382)
136 PRK12382 putative transporter; 99.5 4.5E-12 9.8E-17 113.5 19.2 159 19-191 227-389 (392)
137 TIGR00899 2A0120 sugar efflux 99.5 4E-12 8.6E-17 113.1 18.5 170 10-192 201-374 (375)
138 PRK03545 putative arabinose tr 99.5 6.4E-12 1.4E-16 112.4 19.7 167 13-192 210-381 (390)
139 PF01770 Folate_carrier: Reduc 99.5 8.5E-10 1.8E-14 96.1 31.5 276 60-342 50-346 (412)
140 PRK09556 uhpT sugar phosphate 99.5 5E-12 1.1E-16 115.8 18.8 169 9-188 259-446 (467)
141 KOG4686 Predicted sugar transp 99.4 1.2E-13 2.5E-18 111.5 5.9 259 47-332 75-350 (459)
142 PRK03633 putative MFS family t 99.4 1.2E-11 2.6E-16 110.3 19.6 154 17-185 209-366 (381)
143 PF05977 MFS_3: Transmembrane 99.4 2.3E-11 5.1E-16 111.2 21.4 166 10-186 220-389 (524)
144 PRK09705 cynX putative cyanate 99.4 1.7E-11 3.8E-16 109.6 19.9 178 9-199 206-389 (393)
145 PRK03699 putative transporter; 99.4 9.3E-12 2E-16 111.5 17.0 167 8-186 205-375 (394)
146 TIGR00893 2A0114 d-galactonate 99.4 2.2E-11 4.8E-16 108.9 18.5 172 8-188 215-396 (399)
147 PRK10504 putative transporter; 99.4 3.1E-11 6.7E-16 110.8 19.6 153 7-167 260-412 (471)
148 TIGR00879 SP MFS transporter, 99.4 7.9E-12 1.7E-16 114.8 14.6 145 51-196 319-475 (481)
149 TIGR00883 2A0106 metabolite-pr 99.4 1.4E-11 3E-16 110.2 15.3 159 10-179 221-389 (394)
150 PRK09952 shikimate transporter 99.4 9.1E-11 2E-15 106.5 20.6 167 17-194 259-435 (438)
151 PF11700 ATG22: Vacuole efflux 99.4 8.8E-11 1.9E-15 106.3 20.3 177 7-195 280-471 (477)
152 PRK11663 regulatory protein Uh 99.4 8E-11 1.7E-15 106.8 19.3 176 10-194 245-427 (434)
153 TIGR00897 2A0118 polyol permea 99.4 9.3E-11 2E-15 105.3 19.4 167 9-189 223-399 (402)
154 PRK11273 glpT sn-glycerol-3-ph 99.3 1E-10 2.2E-15 106.8 18.3 172 9-189 254-433 (452)
155 PRK11128 putative 3-phenylprop 99.3 1.7E-10 3.7E-15 102.9 19.1 161 8-182 205-370 (382)
156 PRK11010 ampG muropeptide tran 99.3 1.7E-09 3.6E-14 99.5 25.7 166 17-194 231-405 (491)
157 KOG0637 Sucrose transporter an 99.3 6.3E-11 1.4E-15 102.3 14.8 296 8-326 32-375 (498)
158 TIGR00882 2A0105 oligosacchari 99.3 1.8E-10 4E-15 103.3 18.6 169 13-189 220-393 (396)
159 TIGR00891 2A0112 putative sial 99.3 7.9E-11 1.7E-15 105.8 16.1 131 26-167 256-387 (405)
160 TIGR00900 2A0121 H+ Antiporter 99.3 9.1E-11 2E-15 103.8 16.0 148 10-167 212-360 (365)
161 PRK10077 xylE D-xylose transpo 99.3 6.7E-11 1.5E-15 108.9 15.4 142 54-196 309-462 (479)
162 COG2814 AraJ Arabinose efflux 99.3 4.6E-10 1E-14 97.3 19.2 172 7-190 210-385 (394)
163 PRK15402 multidrug efflux syst 99.3 3.7E-10 7.9E-15 101.7 19.7 175 10-193 217-397 (406)
164 PRK10054 putative transporter; 99.3 2E-10 4.3E-15 102.8 16.9 176 8-193 206-386 (395)
165 TIGR00712 glpT glycerol-3-phos 99.3 2.5E-10 5.4E-15 103.7 17.2 178 10-196 253-438 (438)
166 COG2270 Permeases of the major 99.2 6.1E-10 1.3E-14 95.8 17.0 176 7-194 251-431 (438)
167 TIGR00895 2A0115 benzoate tran 99.2 2.9E-10 6.2E-15 101.9 16.1 142 14-167 256-397 (398)
168 TIGR02718 sider_RhtX_FptX side 99.2 6.9E-10 1.5E-14 99.3 18.4 164 10-185 210-385 (390)
169 PRK08633 2-acyl-glycerophospho 99.2 4.6E-10 9.9E-15 114.3 18.6 159 10-179 234-398 (1146)
170 PF03825 Nuc_H_symport: Nucleo 99.2 1.8E-09 4E-14 95.9 19.8 179 8-194 207-398 (400)
171 PRK10091 MFS transport protein 99.2 1.6E-09 3.4E-14 96.8 19.0 139 46-189 230-374 (382)
172 PF06963 FPN1: Ferroportin1 (F 99.2 2.1E-08 4.5E-13 89.1 25.6 303 8-326 2-336 (432)
173 PLN00028 nitrate transmembrane 99.2 3E-10 6.5E-15 104.2 14.5 149 27-187 271-429 (476)
174 TIGR00898 2A0119 cation transp 99.2 8E-10 1.7E-14 102.4 17.6 136 58-196 362-499 (505)
175 PRK14995 methyl viologen resis 99.2 5.6E-10 1.2E-14 103.0 16.2 150 10-167 261-410 (495)
176 PRK12307 putative sialic acid 99.2 1.3E-09 2.9E-14 98.7 18.4 132 27-168 250-381 (426)
177 PRK15075 citrate-proton sympor 99.2 1.5E-09 3.2E-14 98.6 18.7 139 20-167 250-391 (434)
178 PRK10406 alpha-ketoglutarate t 99.2 2.9E-09 6.3E-14 96.6 20.0 157 21-188 256-421 (432)
179 TIGR00711 efflux_EmrB drug res 99.2 6.4E-10 1.4E-14 102.6 15.9 151 9-167 256-407 (485)
180 TIGR00792 gph sugar (Glycoside 99.2 6.4E-10 1.4E-14 101.1 15.4 149 8-167 222-377 (437)
181 PRK06814 acylglycerophosphoeth 99.2 1E-09 2.2E-14 111.5 17.8 161 8-179 225-410 (1140)
182 PF03092 BT1: BT1 family; Int 99.2 4E-09 8.8E-14 95.1 19.2 264 45-326 19-298 (433)
183 PF01306 LacY_symp: LacY proto 99.2 1E-08 2.2E-13 90.0 20.3 182 8-197 220-406 (412)
184 PRK11195 lysophospholipid tran 99.2 6.2E-09 1.4E-13 93.2 19.8 140 28-179 225-370 (393)
185 TIGR00769 AAA ADP/ATP carrier 99.2 3.1E-07 6.8E-12 82.6 30.2 291 7-325 6-345 (472)
186 PRK11902 ampG muropeptide tran 99.1 7.5E-09 1.6E-13 93.0 19.8 135 46-188 240-387 (402)
187 TIGR00887 2A0109 phosphate:H+ 99.1 2.9E-09 6.2E-14 98.6 17.2 137 59-197 343-494 (502)
188 PRK11646 multidrug resistance 99.1 1.9E-09 4.1E-14 96.7 15.6 128 28-167 228-356 (400)
189 COG2271 UhpC Sugar phosphate p 99.1 3.1E-09 6.7E-14 91.4 15.5 177 7-192 251-435 (448)
190 TIGR02332 HpaX 4-hydroxyphenyl 99.1 2.4E-09 5.2E-14 96.5 15.3 160 10-179 244-409 (412)
191 PRK10213 nepI ribonucleoside t 99.1 1.3E-08 2.8E-13 91.2 19.8 131 47-183 248-383 (394)
192 COG2223 NarK Nitrate/nitrite t 99.1 3.7E-09 8.1E-14 91.0 14.3 172 7-191 217-401 (417)
193 KOG0569 Permease of the major 99.1 1.4E-08 3.1E-13 90.8 18.1 151 47-199 301-462 (485)
194 TIGR00901 2A0125 AmpG-related 99.1 3.2E-09 6.9E-14 93.8 14.1 136 10-154 211-355 (356)
195 PF07690 MFS_1: Major Facilita 99.1 1.5E-09 3.2E-14 95.6 11.8 141 13-161 211-352 (352)
196 PRK11102 bicyclomycin/multidru 99.1 1.9E-08 4.1E-13 89.6 18.8 144 11-166 197-345 (377)
197 PRK09848 glucuronide transport 99.1 3.8E-09 8.2E-14 96.4 14.5 152 7-167 227-385 (448)
198 TIGR00896 CynX cyanate transpo 99.1 9.9E-09 2.1E-13 90.7 16.5 146 9-167 198-345 (355)
199 TIGR00924 yjdL_sub1_fam amino 99.1 2.2E-08 4.8E-13 91.7 19.0 175 11-192 275-469 (475)
200 TIGR00881 2A0104 phosphoglycer 99.0 5.1E-09 1.1E-13 93.1 14.4 150 9-167 217-369 (379)
201 TIGR00710 efflux_Bcr_CflA drug 99.0 2.5E-08 5.3E-13 89.1 18.7 145 11-164 209-356 (385)
202 TIGR01272 gluP glucose/galacto 99.0 2.9E-08 6.3E-13 85.6 18.0 156 9-176 141-300 (310)
203 KOG2504 Monocarboxylate transp 99.0 5E-09 1.1E-13 95.6 13.7 172 8-192 298-476 (509)
204 TIGR00903 2A0129 major facilit 99.0 2.9E-08 6.2E-13 87.9 18.1 170 8-194 192-367 (368)
205 PF13347 MFS_2: MFS/sugar tran 99.0 1.7E-08 3.7E-13 91.5 16.7 149 7-167 224-381 (428)
206 TIGR00894 2A0114euk Na(+)-depe 99.0 2.3E-08 5E-13 91.7 17.6 168 8-187 261-446 (465)
207 PRK15034 nitrate/nitrite trans 99.0 2.9E-08 6.4E-13 89.1 17.6 175 8-192 252-455 (462)
208 PRK10473 multidrug efflux syst 99.0 6.7E-08 1.5E-12 86.6 19.7 138 28-178 223-361 (392)
209 KOG4686 Predicted sugar transp 99.0 3.7E-08 7.9E-13 80.3 15.3 148 7-167 263-411 (459)
210 PRK11652 emrD multidrug resist 98.9 6.7E-08 1.5E-12 86.7 17.4 148 17-176 216-366 (394)
211 PRK10429 melibiose:sodium symp 98.9 2E-08 4.3E-13 92.2 13.5 151 7-167 230-390 (473)
212 PRK10133 L-fucose transporter; 98.9 1.1E-07 2.4E-12 86.3 17.9 128 45-179 289-421 (438)
213 COG0477 ProP Permeases of the 98.9 2E-07 4.4E-12 80.1 17.8 160 13-180 7-174 (338)
214 PF06813 Nodulin-like: Nodulin 98.9 1.7E-07 3.7E-12 77.0 16.1 119 45-166 31-153 (250)
215 PRK10207 dipeptide/tripeptide 98.9 7.5E-08 1.6E-12 88.4 15.6 164 22-189 283-474 (489)
216 TIGR00926 2A1704 Peptide:H+ sy 98.9 1.6E-06 3.4E-11 81.8 24.0 137 51-188 23-179 (654)
217 PRK09669 putative symporter Ya 98.9 1E-07 2.3E-12 86.8 15.6 151 7-167 228-385 (444)
218 PRK09584 tppB putative tripept 98.8 1.7E-07 3.7E-12 86.4 16.5 134 54-188 319-476 (500)
219 KOG3098 Uncharacterized conser 98.8 1.6E-06 3.5E-11 77.2 21.4 247 57-332 56-331 (461)
220 PRK11043 putative transporter; 98.8 6.3E-07 1.4E-11 80.6 18.6 130 27-169 222-356 (401)
221 KOG3762 Predicted transporter 98.8 8.7E-08 1.9E-12 84.9 12.1 163 12-186 375-542 (618)
222 COG2807 CynX Cyanate permease 98.8 1.2E-06 2.5E-11 74.4 17.4 168 10-190 210-384 (395)
223 TIGR01301 GPH_sucrose GPH fami 98.8 1.8E-06 3.9E-11 78.2 19.8 188 8-196 258-476 (477)
224 TIGR00788 fbt folate/biopterin 98.7 1.1E-07 2.5E-12 86.8 10.1 120 44-167 281-410 (468)
225 KOG2532 Permease of the major 98.7 8.2E-07 1.8E-11 80.3 15.1 171 7-187 257-443 (466)
226 TIGR00886 2A0108 nitrite extru 98.7 2.3E-07 5E-12 82.2 11.6 138 10-156 227-365 (366)
227 PF02487 CLN3: CLN3 protein; 98.7 1.5E-05 3.2E-10 70.0 22.2 134 53-195 61-199 (402)
228 TIGR00885 fucP L-fucose:H+ sym 98.6 3.1E-06 6.6E-11 76.2 17.3 149 8-169 232-380 (410)
229 COG2211 MelB Na+/melibiose sym 98.6 4.9E-07 1.1E-11 80.4 11.7 152 6-166 234-392 (467)
230 KOG0253 Synaptic vesicle trans 98.6 3.8E-07 8.3E-12 77.3 9.6 126 61-192 391-519 (528)
231 PRK11462 putative transporter; 98.6 1.9E-06 4.1E-11 78.8 14.8 150 7-166 227-383 (460)
232 PRK15403 multidrug efflux syst 98.5 9.9E-06 2.1E-10 73.1 18.0 163 9-182 219-388 (413)
233 PRK15462 dipeptide/tripeptide 98.5 1.3E-06 2.8E-11 79.4 11.4 109 245-354 8-119 (493)
234 PF12832 MFS_1_like: MFS_1 lik 98.5 1.1E-06 2.3E-11 58.1 7.9 71 12-90 4-74 (77)
235 PF03219 TLC: TLC ATP/ADP tran 98.5 0.00023 5E-09 64.7 25.3 236 64-319 72-355 (491)
236 PF05978 UNC-93: Ion channel r 98.5 1E-05 2.2E-10 61.4 13.6 102 58-164 44-145 (156)
237 PF03209 PUCC: PUCC protein; 98.4 3.2E-05 6.9E-10 67.3 17.8 165 13-185 213-392 (403)
238 PF06779 DUF1228: Protein of u 98.4 2.7E-06 6E-11 56.6 7.9 76 20-103 4-79 (85)
239 KOG3764 Vesicular amine transp 98.4 9.8E-07 2.1E-11 75.6 6.6 167 10-187 272-450 (464)
240 KOG4332 Predicted sugar transp 98.3 1.2E-05 2.6E-10 65.4 11.3 80 53-137 74-154 (454)
241 KOG3810 Micronutrient transpor 98.3 5.2E-05 1.1E-09 64.0 14.6 267 63-342 54-332 (433)
242 PF12832 MFS_1_like: MFS_1 lik 98.3 8.5E-06 1.8E-10 53.9 8.1 71 250-322 4-74 (77)
243 PF06609 TRI12: Fungal trichot 98.3 5.9E-05 1.3E-09 69.9 16.3 149 7-161 309-458 (599)
244 KOG0252 Inorganic phosphate tr 98.2 2.1E-06 4.5E-11 75.1 5.3 130 66-200 363-506 (538)
245 KOG0254 Predicted transporter 98.2 5.3E-05 1.1E-09 70.5 13.9 181 8-199 295-491 (513)
246 PF13000 Acatn: Acetyl-coenzym 98.1 0.00017 3.8E-09 64.1 15.7 283 11-307 3-337 (544)
247 COG0738 FucP Fucose permease [ 98.1 0.00022 4.7E-09 61.8 15.0 150 7-170 235-384 (422)
248 KOG3574 Acetyl-CoA transporter 98.1 0.00045 9.8E-09 59.3 16.3 261 7-307 30-324 (510)
249 COG3104 PTR2 Dipeptide/tripept 98.0 6.9E-05 1.5E-09 66.7 11.3 113 242-355 17-137 (498)
250 KOG3762 Predicted transporter 98.0 1.7E-05 3.6E-10 70.9 6.1 104 235-341 361-464 (618)
251 COG3202 ATP/ADP translocase [E 97.9 0.017 3.6E-07 51.8 26.9 256 53-326 63-365 (509)
252 KOG2533 Permease of the major 97.8 0.00019 4.2E-09 65.4 11.1 156 9-175 274-440 (495)
253 KOG2615 Permease of the major 97.8 0.00032 6.9E-09 60.3 11.5 123 43-169 289-414 (451)
254 KOG0255 Synaptic vesicle trans 97.8 0.0021 4.5E-08 60.1 18.0 136 63-199 362-500 (521)
255 PTZ00207 hypothetical protein; 97.8 0.00027 5.9E-09 65.9 11.2 82 270-353 50-138 (591)
256 PF00083 Sugar_tr: Sugar (and 97.7 4.4E-07 9.6E-12 82.9 -7.5 139 61-200 296-445 (451)
257 TIGR00806 rfc RFC reduced fola 97.7 0.00036 7.7E-09 62.6 10.8 91 262-353 41-133 (511)
258 KOG2816 Predicted transporter 97.7 0.001 2.2E-08 60.3 13.7 119 44-167 270-389 (463)
259 PF06779 DUF1228: Protein of u 97.5 0.0014 3E-08 43.8 8.3 77 260-338 6-82 (85)
260 PF00854 PTR2: POT family; In 97.3 0.0016 3.4E-08 58.0 9.4 104 82-186 2-118 (372)
261 KOG3098 Uncharacterized conser 97.2 0.019 4.1E-07 51.7 15.0 152 8-165 240-409 (461)
262 KOG1330 Sugar transporter/spin 97.2 0.00085 1.8E-08 59.3 6.2 83 273-356 59-142 (493)
263 TIGR00805 oat sodium-independe 97.0 0.0014 3E-08 62.5 6.3 72 261-333 47-118 (633)
264 PF05631 DUF791: Protein of un 96.9 0.029 6.3E-07 48.5 12.7 75 276-352 63-138 (354)
265 PRK03612 spermidine synthase; 96.9 0.12 2.7E-06 48.0 17.6 118 48-167 47-168 (521)
266 KOG2563 Permease of the major 96.8 0.0019 4.1E-08 57.0 4.9 101 51-152 301-403 (480)
267 KOG3880 Predicted small molecu 96.7 0.0083 1.8E-07 50.3 7.4 178 10-196 14-204 (409)
268 PF02487 CLN3: CLN3 protein; 96.6 0.13 2.8E-06 45.7 14.5 108 52-167 282-394 (402)
269 PF03092 BT1: BT1 family; Int 96.5 0.022 4.8E-07 51.7 10.0 145 48-197 252-418 (433)
270 TIGR00880 2_A_01_02 Multidrug 96.3 0.0041 8.8E-08 46.2 3.1 63 290-353 6-69 (141)
271 TIGR00926 2A1704 Peptide:H+ sy 96.1 0.035 7.7E-07 52.9 9.3 95 261-356 2-106 (654)
272 TIGR00939 2a57 Equilibrative N 96.1 1 2.3E-05 41.0 21.6 86 53-140 47-137 (437)
273 PF06963 FPN1: Ferroportin1 (F 96.0 0.41 8.9E-06 43.2 14.8 120 47-167 289-415 (432)
274 PF06813 Nodulin-like: Nodulin 95.5 0.15 3.3E-06 42.3 9.3 63 268-332 23-85 (250)
275 KOG1237 H+/oligopeptide sympor 95.4 0.41 8.9E-06 45.0 12.8 130 55-185 77-239 (571)
276 TIGR00939 2a57 Equilibrative N 94.7 0.49 1.1E-05 43.0 11.1 111 52-164 308-428 (437)
277 KOG4332 Predicted sugar transp 94.6 0.54 1.2E-05 39.1 9.9 133 54-187 285-427 (454)
278 PF07672 MFS_Mycoplasma: Mycop 94.6 0.35 7.5E-06 39.9 8.8 51 140-190 2-61 (267)
279 KOG2325 Predicted transporter/ 94.4 0.11 2.4E-06 47.2 6.3 82 247-330 35-119 (488)
280 KOG3097 Predicted membrane pro 94.3 3.1 6.8E-05 35.8 18.0 72 61-137 68-139 (390)
281 PF05978 UNC-93: Ion channel r 94.3 0.8 1.7E-05 34.9 9.8 65 289-355 44-109 (156)
282 KOG1479 Nucleoside transporter 94.2 3.9 8.4E-05 36.5 18.7 112 22-141 32-149 (406)
283 PF07857 DUF1632: CEO family ( 93.3 4.1 8.9E-05 33.9 14.9 42 258-299 190-235 (254)
284 PF01770 Folate_carrier: Reduc 91.8 4 8.6E-05 36.6 11.7 98 52-153 286-385 (412)
285 KOG1479 Nucleoside transporter 91.4 2.1 4.7E-05 38.0 9.6 133 25-164 260-399 (406)
286 KOG0637 Sucrose transporter an 91.3 0.87 1.9E-05 40.9 7.1 123 7-133 278-410 (498)
287 COG0477 ProP Permeases of the 90.9 3.5 7.5E-05 34.7 10.7 74 260-335 16-91 (338)
288 KOG2601 Iron transporter [Inor 89.4 7.6 0.00017 34.3 10.8 78 8-92 27-104 (503)
289 KOG3880 Predicted small molecu 88.0 2.8 6E-05 35.8 7.2 73 90-166 328-400 (409)
290 PF01733 Nucleoside_tran: Nucl 87.3 0.22 4.9E-06 43.0 0.6 108 55-164 186-304 (309)
291 KOG4830 Predicted sugar transp 87.2 0.15 3.3E-06 41.9 -0.4 57 243-299 198-254 (412)
292 PF03137 OATP: Organic Anion T 86.6 0.21 4.4E-06 46.8 0.0 79 252-332 9-87 (539)
293 KOG2881 Predicted membrane pro 82.8 22 0.00047 29.5 9.7 24 303-326 260-283 (294)
294 KOG3810 Micronutrient transpor 81.9 36 0.00077 30.0 11.4 100 51-154 271-372 (433)
295 COG5336 Uncharacterized protei 78.3 14 0.0003 25.8 6.2 38 51-88 42-80 (116)
296 PF01733 Nucleoside_tran: Nucl 72.9 1.1 2.5E-05 38.7 0.0 18 287-305 187-204 (309)
297 KOG3626 Organic anion transpor 71.4 17 0.00038 35.3 7.3 80 9-95 393-475 (735)
298 PF02990 EMP70: Endomembrane p 70.4 97 0.0021 29.2 13.1 23 288-311 303-325 (521)
299 KOG3574 Acetyl-CoA transporter 68.5 19 0.00041 32.1 6.3 83 245-332 30-118 (510)
300 PRK03612 spermidine synthase; 60.6 1E+02 0.0022 29.0 10.2 58 251-309 19-76 (521)
301 PF02694 UPF0060: Uncharacteri 59.2 26 0.00056 24.6 4.4 51 282-333 54-104 (107)
302 KOG1237 H+/oligopeptide sympor 59.1 81 0.0017 30.1 9.2 80 251-331 42-122 (571)
303 PF00854 PTR2: POT family; In 58.6 72 0.0016 28.3 8.6 91 10-102 33-123 (372)
304 PRK13629 threonine/serine tran 57.2 1.6E+02 0.0034 27.1 16.9 32 138-169 18-49 (443)
305 KOG3097 Predicted membrane pro 55.9 1.4E+02 0.0029 26.4 9.0 25 301-325 76-100 (390)
306 PRK11588 hypothetical protein; 53.8 1.9E+02 0.0042 27.0 13.5 33 71-103 136-170 (506)
307 PRK02237 hypothetical protein; 52.6 51 0.0011 23.2 5.0 50 283-333 57-106 (109)
308 COG4262 Predicted spermidine s 51.5 1.8E+02 0.0038 25.9 14.1 83 52-135 44-132 (508)
309 TIGR02840 spore_YtaF putative 46.9 1.5E+02 0.0033 23.9 15.0 49 278-327 153-203 (206)
310 COG3559 TnrB3 Putative exporte 45.4 2.4E+02 0.0052 25.7 17.8 33 122-154 175-209 (536)
311 TIGR00814 stp serine transport 45.2 2.4E+02 0.0051 25.6 17.7 34 138-171 2-35 (397)
312 PF07672 MFS_Mycoplasma: Mycop 44.1 1.6E+02 0.0035 24.8 7.5 103 54-158 144-253 (267)
313 PF09527 ATPase_gene1: Putativ 41.8 77 0.0017 19.0 5.5 33 61-93 10-43 (55)
314 COG1268 BioY Uncharacterized c 41.4 1E+02 0.0022 24.3 5.8 21 60-80 91-111 (184)
315 PF11947 DUF3464: Protein of u 40.5 94 0.002 23.6 5.3 48 107-158 97-144 (153)
316 PRK11469 hypothetical protein; 38.7 2E+02 0.0043 22.8 15.2 53 278-330 130-182 (188)
317 COG3619 Predicted membrane pro 36.9 2.4E+02 0.0052 23.2 15.6 27 54-81 58-84 (226)
318 PF02694 UPF0060: Uncharacteri 36.8 75 0.0016 22.4 3.9 48 54-101 57-104 (107)
319 PRK02237 hypothetical protein; 36.1 1E+02 0.0022 21.8 4.4 49 53-101 58-106 (109)
320 COG1457 CodB Purine-cytosine p 34.8 3.7E+02 0.008 24.8 14.3 64 249-315 97-160 (442)
321 COG1811 Uncharacterized membra 34.8 1.8E+02 0.0038 23.6 6.1 46 301-346 21-66 (228)
322 PF06783 UPF0239: Uncharacteri 34.6 1.3E+02 0.0027 20.2 4.5 20 170-189 23-42 (85)
323 KOG4830 Predicted sugar transp 33.3 78 0.0017 26.7 4.2 60 254-315 25-93 (412)
324 PF13493 DUF4118: Domain of un 32.7 1E+02 0.0022 21.3 4.4 21 61-81 85-105 (105)
325 PF11299 DUF3100: Protein of u 32.7 1.2E+02 0.0026 24.9 5.0 53 112-166 176-228 (241)
326 PF11511 RhodobacterPufX: Intr 32.3 1.4E+02 0.0029 19.0 4.5 33 168-200 29-61 (67)
327 PF11872 DUF3392: Protein of u 31.7 1.9E+02 0.0041 20.5 6.7 35 242-276 45-79 (106)
328 PF02632 BioY: BioY family; I 30.8 2.3E+02 0.005 21.4 6.1 23 60-82 62-84 (148)
329 KOG2601 Iron transporter [Inor 30.7 4.1E+02 0.009 24.1 8.4 73 249-322 30-102 (503)
330 cd02434 Nodulin-21_like_3 Nodu 28.7 3.3E+02 0.0071 22.3 7.9 14 260-273 145-158 (225)
331 TIGR00769 AAA ADP/ATP carrier 28.4 4.9E+02 0.011 24.3 20.0 66 113-179 272-342 (472)
332 PF06912 DUF1275: Protein of u 26.7 3.3E+02 0.0072 21.8 15.7 23 147-169 169-191 (209)
333 PF04474 DUF554: Protein of un 26.5 3E+02 0.0065 22.6 6.4 46 301-346 20-65 (226)
334 PF12273 RCR: Chitin synthesis 25.9 31 0.00068 25.3 0.7 16 170-185 1-16 (130)
335 PF04341 DUF485: Protein of un 25.8 2.2E+02 0.0048 19.3 8.0 65 245-309 15-79 (91)
336 PF02554 CstA: Carbon starvati 25.1 5E+02 0.011 23.3 16.2 35 135-170 48-83 (376)
337 PF04024 PspC: PspC domain; I 24.7 1.8E+02 0.004 18.0 4.4 26 170-195 32-60 (61)
338 PF03741 TerC: Integral membra 24.2 3.6E+02 0.0078 21.3 18.0 25 124-148 12-36 (183)
339 PF13386 DsbD_2: Cytochrome C 24.1 3.7E+02 0.008 21.3 18.0 31 279-310 147-177 (199)
340 PF10183 ESSS: ESSS subunit of 23.7 1.5E+02 0.0032 20.9 3.8 29 167-195 57-85 (105)
341 COG2962 RarD Predicted permeas 23.6 4.7E+02 0.01 22.4 11.6 45 283-330 100-144 (293)
342 PF04281 Tom22: Mitochondrial 23.4 3.2E+02 0.0069 20.4 6.1 25 132-156 59-83 (137)
343 COG1983 PspC Putative stress-r 22.7 2.2E+02 0.0048 18.3 4.3 17 181-197 50-66 (70)
344 PF04964 Flp_Fap: Flp/Fap pili 22.5 1.1E+02 0.0024 17.6 2.5 37 273-309 2-38 (46)
345 COG4769 Predicted membrane pro 21.0 1.9E+02 0.0042 22.3 4.0 50 61-119 83-132 (181)
346 PF04226 Transgly_assoc: Trans 20.7 1.9E+02 0.0042 16.9 4.8 34 155-188 6-43 (48)
347 PF11833 DUF3353: Protein of u 20.5 3.6E+02 0.0077 21.6 5.7 29 139-167 136-164 (194)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-33 Score=239.71 Aligned_cols=285 Identities=19% Similarity=0.231 Sum_probs=248.0
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
+..++.+.++.|.......+..+.+|++.+ +++++....|+..+.|.++..+++|+...+.||+.||++++.
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~--------dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~ 83 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAA--------DLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLG 83 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHH
Confidence 445677888888899999999999999987 457777889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
...++.++++++++++| ++.++++|++.|+ +.|.+++...++..|..|+++|++++++...+.+++.++|..+|.+
T Consensus 84 ~l~lFi~~n~l~alAp~---f~~Ll~aR~~~g~-a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ 159 (394)
T COG2814 84 LLALFIVSNLLSALAPS---FAVLLLARALAGL-AHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF 159 (394)
T ss_pred HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999 9999999999999 8899999999999999999999999999999999998888666655
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhh
Q 018388 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (357)
Q Consensus 167 ----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (357)
+|||+.|+..+.++++..+..+..+| |++.+++ ...+.++..+.+
T Consensus 160 ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~-----------------------------~~~~~~~~~~~l 208 (394)
T COG2814 160 LGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISGS-----------------------------LPGPLRTLLRLL 208 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCC-----------------------------CCcchhHHHHHh
Confidence 59999999999999999998888898 2111111 111333434444
Q ss_pred hcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHH
Q 018388 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (357)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (357)
|+|.++...+..++...+++..++|+..+++|..|++.+..++....++++..+++ .+.|++.|| +.|+.+.....+
T Consensus 209 -~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn-~~gGrl~dr-~~~~~l~~~~~l 285 (394)
T COG2814 209 -RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGN-LLGGRLADR-GPRRALIAALLL 285 (394)
T ss_pred -cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHH-HHHhhhccc-cchhHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999 899999999 888888888888
Q ss_pred HHHHHHHHHhcCcch
Q 018388 323 ACINMFICSISWSAW 337 (357)
Q Consensus 323 ~~i~~~~~~~~~~~~ 337 (357)
..+..+.+.+..+..
T Consensus 286 ~a~~~l~l~~~~~~~ 300 (394)
T COG2814 286 LALALLALTFTGASP 300 (394)
T ss_pred HHHHHHHHHHhcchH
Confidence 888777776655443
No 2
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=2.3e-32 Score=250.69 Aligned_cols=336 Identities=16% Similarity=0.099 Sum_probs=254.3
Q ss_pred cchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchh
Q 018388 4 EKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAM 83 (357)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~ 83 (357)
.+++..+..+++..++..++.+++...+|.+.+| ++.+..+.+|+.+.+.++...+.+++|+++||+|||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~--------l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~ 73 (495)
T PRK14995 2 FRQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMT--------LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRL 73 (495)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 3445567788999999999999999999999764 45555667999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCC-CccchhHHHHHHHHHHHHHHHhhHh
Q 018388 84 LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTL 162 (357)
Q Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (357)
++.+.++..++++++++++| ++.++++|+++|+ +.+...+.....+.+.+ |+++|++++++......+|..+||.
T Consensus 74 l~~~~~~~~~~~~~~~~a~~---~~~li~~r~l~G~-g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~ 149 (495)
T PRK14995 74 LMLGGTLFGLASLAAAFSPT---ASWLIATRALLAI-GAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPL 149 (495)
T ss_pred HHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 9999999999999 66777777787776665 6899999999999999999999999
Q ss_pred hhHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCccccccc---------ccccccCCCCCCC-----
Q 018388 163 AARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEE---------TEGVNQNESNSPV----- 224 (357)
Q Consensus 163 ~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~----- 224 (357)
+++.+ +|||.|++...+.++..++..+.+||++++++++.|..+..... ..+...++.....
T Consensus 150 lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 229 (495)
T PRK14995 150 VGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTL 229 (495)
T ss_pred HHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHH
Confidence 99886 89999999988877777777777888655443333433221100 0000000000000
Q ss_pred ----------CccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHH
Q 018388 225 ----------KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLA 294 (357)
Q Consensus 225 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 294 (357)
...+.+.+++..+ .+ ++++|.+....+..++......+...++|.|+++.+|+++.++|.......+.
T Consensus 230 ~~~~~~l~~f~~~e~~~~~p~~~-~~-lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~ 307 (495)
T PRK14995 230 LTGALLLGLFIRTQLAASRPMID-MR-LFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVA 307 (495)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcC-HH-HhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 0001111222222 22 34577887777777777777778888999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhc---CcchHHHH-HHHHHHhhhcccc
Q 018388 295 GTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS---WSAWVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~p 354 (357)
..++. .+.|++.||+++|+.+..+..+..++...+... ++.+..+. ..+.++|.+...+
T Consensus 308 ~~~~~-~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~ 370 (495)
T PRK14995 308 SGFSG-PIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALL 370 (495)
T ss_pred HHHHH-HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHH
Confidence 99988 888999999999999888888888777655442 23333333 4555777666554
No 3
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=2.2e-31 Score=237.79 Aligned_cols=294 Identities=14% Similarity=0.145 Sum_probs=221.7
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
++.+.+..++.........+.+|.+.+ +++.+..+.|+..+.+.+++.+++++.|+++||+|||+++..+.+
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~--------~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 82 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQ--------SFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFV 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHh--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 444555555554554555667787765 456677888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh--
Q 018388 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-- 167 (357)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-- 167 (357)
+..++++.+.++++ ++.+++.|+++|+ +.+...+...+++.|++|+|+|++++++.....++|..+||.+++.+
T Consensus 83 ~~~~~~~~~~~~~~---~~~l~~~r~~~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~ 158 (390)
T PRK03545 83 LFIASHVLSALAWN---FTVLLISRIGIAF-AHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ 158 (390)
T ss_pred HHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999999 8999999999999 66777788999999999999999999999999999999999888764
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcc
Q 018388 168 --STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (357)
Q Consensus 168 --~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (357)
+||+.|++.+++.++..+.....+||+++++++ +.++..+ ..|+
T Consensus 159 ~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~-~~~~ 204 (390)
T PRK03545 159 YLGWRTTFLAIGGGALITLLLLIKLLPLLPSEHSG---------------------------------SLKSLPL-LFRR 204 (390)
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcc---------------------------------hHHHHHH-HHhC
Confidence 899999999888776666555556654321100 1122222 4457
Q ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHH
Q 018388 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (357)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i 325 (357)
|.++......++.........++++.|+++..|.++.+.+...+..+++..+++ ++.+++.||+++|... .+..+...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~~~-~~~~~~~~ 282 (390)
T PRK03545 205 PALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGS-VLFSRLGNRHPSGFLL-IAIALLLV 282 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHH-HHHHHHhhccchhHHH-HHHHHHHH
Confidence 777666665555555566667788888888789999999999999999999988 8889999999987654 44444444
Q ss_pred HHHH-HHhcCcchHHHH-HHHHHHhhhc
Q 018388 326 NMFI-CSISWSAWVPYA-TTAFSVLVVF 351 (357)
Q Consensus 326 ~~~~-~~~~~~~~~~~~-~~~~~~~~~~ 351 (357)
+... ....++.+..+. ..+.+++.+.
T Consensus 283 ~~~~l~~~~~~~~~~~~~~~l~g~~~~~ 310 (390)
T PRK03545 283 CLLLLLPAANSEWHLSVLSIFWGIAIMC 310 (390)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhc
Confidence 4333 334444444333 3445555443
No 4
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=6.3e-31 Score=235.80 Aligned_cols=305 Identities=12% Similarity=0.069 Sum_probs=226.1
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++.+..+++..+++..+........|.+.+ +++++..+.|++.+++.+++.+++++.|+++||+|||+++..
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~--------~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 78 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGK--------DLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAG 78 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHh--------hcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHH
Confidence 455666777777888888888888886543 567777889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
+.++..++..+++++++ ++.+++.|+++|+ +.+...|....++.|++|+|+|++++++++...++|..++|.++++
T Consensus 79 ~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~ 154 (412)
T TIGR02332 79 IMVLWGIASTATMFATG---PESLYLLRILVGI-AEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGY 154 (412)
T ss_pred HHHHHHHHHHHHHHhcC---HHHHHHHHHHHHH-HHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 8899999999999 7677778888999999999999999999999999999999988875
Q ss_pred h----------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcc-cccccccccccCCCCCCCCccccccchhH
Q 018388 167 L----------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRP-IITEETEGVNQNESNSPVKIPVCKKIPSI 235 (357)
Q Consensus 167 l----------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (357)
+ +||+.|++.++..++..++.++++||+|++++.-.+.++ ......+..+.+.++ +.. ...+.....
T Consensus 155 l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~ 232 (412)
T TIGR02332 155 ILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQ-PEG-AFAHAAMPQ 232 (412)
T ss_pred HHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccc-ccc-ccccccccH
Confidence 3 899999998888777666677778888754321000000 000000000000000 000 000111111
Q ss_pred HHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhh-cccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhH
Q 018388 236 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ-FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (357)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (357)
++.++.++ ++.++...+..++.........+++|.|+++. .|.+..+.+.+.....++..++. ++.+++.||+++|+
T Consensus 233 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~-l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 233 RSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGM-IWWSRHSDRLKERK 310 (412)
T ss_pred HHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHH-HHHHHHhcccCccH
Confidence 22233344 46677777777888788888899999999873 46777888888899999988988 89999999998766
Q ss_pred H-HHHHHHHHHHHH
Q 018388 315 L-LSLGLFAACINM 327 (357)
Q Consensus 315 ~-~~~~~~~~~i~~ 327 (357)
. .........++.
T Consensus 311 ~~~~~~~~~~~~~~ 324 (412)
T TIGR02332 311 HHTALPYLFAAAGW 324 (412)
T ss_pred HHHHHHHHHHHHHH
Confidence 4 344444444443
No 5
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=1.8e-30 Score=229.95 Aligned_cols=306 Identities=15% Similarity=0.144 Sum_probs=235.9
Q ss_pred HHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHH
Q 018388 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (357)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~ 91 (357)
.+....++..++..+..+.+|.+..+ .+.+..+.|++.+++.++..++++++|+++||+|||+++..+.++.
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~ 74 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLA--------GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIR 74 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHH--------hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHH
Confidence 45678888999999999999998864 3556678899999999999999999999999999999999999998
Q ss_pred HHHHHHHHHcc-----chhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 92 IIPLAILAYRR-----SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 92 ~~~~~~~~~~~-----~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
.++..+..+++ + ++.+++.|+++|+ +.+...+...+++.|+.|+|+|++++++.+....+|..+||.+++.
T Consensus 75 ~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~ 150 (365)
T TIGR00900 75 AVLVAVLPFVALLGGLN---IWQVYVLAGILAI-AQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGL 150 (365)
T ss_pred HHHHHHHHHHHHcCCCc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 88888877776 7 8889999999999 7788889999999999999999999999999999999999998877
Q ss_pred h----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhh
Q 018388 167 L----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (357)
Q Consensus 167 l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (357)
+ +||+.|++.++..++..+..+. .++++++++++++ .+++..++.++..+.+
T Consensus 151 l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~ 206 (365)
T TIGR00900 151 MYATLGIKWAIWVDAVGFAISALLIVS-VRIPELAASEIQA-----------------------LSNAVLRDTREGIKFV 206 (365)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHh-cccccCCCccccc-----------------------cchhHHHHHHhHHHHH
Confidence 4 8999999887765554443332 3221111111000 0000011222334446
Q ss_pred hcccchHHHHHHHHHHHHhhhhhh-HHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHH
Q 018388 243 RSSVTLSQAAVVAFFSGLSEGGMQ-ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (357)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (357)
+++|.++...+..++......... .+.|.|.++.+|.++.+.+.......++..++. ++.+++.||.++|+.+..+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~ 285 (365)
T TIGR00900 207 LKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGA-LLLGLLGRYFKRMALMTGAIF 285 (365)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhchhHHHHHHHH
Confidence 678888888777777777666665 888999988789999999999999999988888 788999999999999888877
Q ss_pred HHHHHHHHHHhcCc-chHHHH-HHHHHHhhhcccc
Q 018388 322 AACINMFICSISWS-AWVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 322 ~~~i~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~p 354 (357)
+.+++...+.+.++ .+..+. ..+.+++.+...|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 320 (365)
T TIGR00900 286 VIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINV 320 (365)
T ss_pred HHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 77777777666654 443333 4455666655544
No 6
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=5e-30 Score=228.84 Aligned_cols=285 Identities=18% Similarity=0.165 Sum_probs=229.3
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhh
Q 018388 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (357)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~ 85 (357)
+++....+....++...+..+..|.+|.+.++ ++.+..+.|++.+.+.++..++.++.|+++||+|||+.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~ 74 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAFPEIAAD--------LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLL 74 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHH
Confidence 34555566666677788889999999988764 4556678899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhH
Q 018388 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (357)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 165 (357)
.+.++..++.+...++++ ++.+++.|++.|+ +.+...+...+++.|++|+|+|+++++..+....+|..+||.+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 150 (385)
T TIGR00710 75 LGLFIFALSSLGLALSNN---IETLLVLRFVQAF-GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGG 150 (385)
T ss_pred HHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHc-chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 8889999999999 777777899999999999999999999999999999999998888
Q ss_pred Hh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHh
Q 018388 166 FL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241 (357)
Q Consensus 166 ~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (357)
.+ +||+.|++.+++..+..+..++..||++++++++ +.++..++ .+.
T Consensus 151 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~-~~~ 201 (385)
T TIGR00710 151 YILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARI----------------------------QISTYFET-FLL 201 (385)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC----------------------------CHHHHHHH-HHH
Confidence 64 8999999888877766666666666654322110 00111122 233
Q ss_pred hhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHH
Q 018388 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (357)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (357)
..++|+++...+...+..........+.|.+.++.+|.++.+.+.+.....++..+++ ++.+++.||+++|+.+..+..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~ 280 (385)
T TIGR00710 202 LLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGG-FLNGRFIKKWGAKSLLRMGLI 280 (385)
T ss_pred HHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHH
Confidence 4567777777766666666667777788989888889999999999999999888888 888999999999998888877
Q ss_pred HHHHHHHHHHh
Q 018388 322 AACINMFICSI 332 (357)
Q Consensus 322 ~~~i~~~~~~~ 332 (357)
+..++..++..
T Consensus 281 ~~~~~~~~~~~ 291 (385)
T TIGR00710 281 LFAVSAVLLEI 291 (385)
T ss_pred HHHHHHHHHHH
Confidence 77776655544
No 7
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=6e-30 Score=227.69 Aligned_cols=279 Identities=15% Similarity=0.210 Sum_probs=224.2
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++.++.+.+..+....+.....+.+|.+.+| ++.+..+.|+..+.+.++..+++++.|+++||+|||+++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 73 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTELAHD--------VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLF 73 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHHHHHH--------cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHH
Confidence 3467788888899999999999999998763 45566778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
+.++.+++.++++++++ ++.+++.|+++|+ +.+...+....++.|+.|+++|+++++....+..+|..+||.+++.
T Consensus 74 ~~~~~~~~~~l~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~ 149 (382)
T PRK10091 74 LVALCVIGNAMFTLSSS---YLMLAIGRLVSGF-PHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTY 149 (382)
T ss_pred HHHHHHHHHHHHHHhCc---HHHHHHHHHHHHh-hhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999 8999999999999 7677777888889999999999999999999999999999988876
Q ss_pred h----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhh
Q 018388 167 L----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (357)
Q Consensus 167 l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (357)
+ +||+.|++.+++..+..+..++.+||.+++++. +.++..+.+
T Consensus 150 l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~---------------------------------~~~~~~~~~ 196 (382)
T PRK10091 150 LSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKG---------------------------------GLREQFHFL 196 (382)
T ss_pred HhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc---------------------------------CHHHHHHHh
Confidence 4 899999999887776666556667775321110 001112223
Q ss_pred hcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHH
Q 018388 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (357)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (357)
+++..+......++.........++++.|.++.+|+++.+.+.+.+..+++..+++ ++.+++.||+++|+.+..+..+
T Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~~r~~~~~~~~~~~~~ 274 (382)
T PRK10091 197 -RSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGN-LLSGRLSGRYSPLRIAAVTDFI 274 (382)
T ss_pred -cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHh-HHHheeccccCchhHHHHHHHH
Confidence 35555555544444444444556677778887779999999999999999999998 8889999999999998888888
Q ss_pred HHHHHHHHHh
Q 018388 323 ACINMFICSI 332 (357)
Q Consensus 323 ~~i~~~~~~~ 332 (357)
.+++.+++..
T Consensus 275 ~~i~~~~~~~ 284 (382)
T PRK10091 275 IVLALLMLFF 284 (382)
T ss_pred HHHHHHHHHH
Confidence 7777655543
No 8
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-30 Score=219.59 Aligned_cols=320 Identities=14% Similarity=0.120 Sum_probs=248.7
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
+..++++.....+..-......|.+.++ .+++..+.|++.+.+.+.+.++..+.|.++||.++|+.+-.+++
T Consensus 31 f~~~fiGYa~fYl~RknF~~a~p~l~e~--------~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLi 102 (448)
T COG2271 31 FLSIFIGYAAFYLTRKNFNLAMPALIED--------GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHhHhhccHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHH
Confidence 3444555555556666667778888763 34677889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhh--HHh
Q 018388 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA--RFL 167 (357)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l 167 (357)
++++.+++++++++ ++.+.+..+++|. .+|.-.|.+...+++|+|++|||+..++.+.+.++|..+.|++. +++
T Consensus 103 lsai~nil~Gfs~s---~~~~~~l~~lng~-fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~ 178 (448)
T COG2271 103 LSAIVNILFGFSPS---LFLFAVLWVLNGW-FQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFF 178 (448)
T ss_pred HHHHHHHHHhhhhH---HHHHHHHHHHHHH-HhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHH
Confidence 99999999999998 9999999999999 67878899999999999999999999999999999999888877 554
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCcccccc-chhHHHHHHhh
Q 018388 168 ----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKK-IPSIRDLICLL 242 (357)
Q Consensus 168 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 242 (357)
+||..|++.++++++..++.++..+|+|++..-..- ++.+++..+.. +++++++ ...+....+.+
T Consensus 179 ~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~i---------e~~~~d~~e~~-~~~~~~~~ls~~~i~~~YV 248 (448)
T COG2271 179 AFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPI---------EEYRGDPLEIY-EEEKENEGLTAWQIFVKYV 248 (448)
T ss_pred HhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCH---------HHhhcCchhhh-hhhccCCCccHHHHHHHHH
Confidence 899999999999999989888888888875432100 00000000000 1111111 22234445667
Q ss_pred hcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhcc--chhHHH-HHH
Q 018388 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAKLL-SLG 319 (357)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~-~~~ 319 (357)
.+||.+|.+.++.++....-.++..|.|.|+.|..|+|..+++...+.+-.+++.+. +++|+++||. |||... ++.
T Consensus 249 L~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~-Ll~GwlSDklfkgrR~p~~~i~ 327 (448)
T COG2271 249 LKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGT-LLAGWLSDKLFKGRRGPMALIF 327 (448)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHH-HHHHHHHHHhcccccchHHHHH
Confidence 889999999999999999999999999999999999999999999999999999999 9999999986 455554 444
Q ss_pred HHHHHHHHHHHHhcCcc-hHHHHHHHHHHhhhcc
Q 018388 320 LFAACINMFICSISWSA-WVPYATTAFSVLVVFA 352 (357)
Q Consensus 320 ~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 352 (357)
++...++.+.+...++. ..+....++.+|.-+.
T Consensus 328 ~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~Iy 361 (448)
T COG2271 328 MLLITASLVLYWLAPNGSYLLDAILLFIIGFLIY 361 (448)
T ss_pred HHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHh
Confidence 55555556566666654 2333344444444433
No 9
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=8.3e-30 Score=227.24 Aligned_cols=293 Identities=12% Similarity=0.142 Sum_probs=214.6
Q ss_pred HHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHH
Q 018388 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (357)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~ 93 (357)
....+..........+.+|.+.+ +++.+..+.|+..+.+.++..+++++.|+++||+|||+.+..+.++.++
T Consensus 26 ~~~~~~~~~~~~~~~~~l~~~~~--------~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 26 AFCVACLIIVEFLPVSLLTPMAQ--------DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 33333344444455567777654 4567778889999999999999999999999999999999999999999
Q ss_pred HHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hh
Q 018388 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----ST 169 (357)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~ 169 (357)
+.+++.++++ ++.+++.|+++|+ +.+...+...+++.|++|+|+|++++++.....++|..+||.+++.+ +|
T Consensus 98 ~~~~~~~~~~---~~~l~~~r~l~G~-~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw 173 (394)
T PRK10213 98 SCLLVSFANS---FSLLLIGRACLGL-ALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGW 173 (394)
T ss_pred HHHHHHHHCh---HHHHHHHHHHHHH-hhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCH
Confidence 9999999988 9999999999999 76778899999999999999999999999999999999999988875 89
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchH
Q 018388 170 TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLS 249 (357)
Q Consensus 170 ~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (357)
|+.|++.+++.++..+......||+++++++ .. ++..+ ..++|.++
T Consensus 174 ~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~------------------------------~~---~~~~~-~l~~~~~~ 219 (394)
T PRK10213 174 RNVFNAAAVMGVLCIFWIIKSLPSLPGEPSH------------------------------QK---QNTFR-LLQRPGVM 219 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCccccc------------------------------ch---hHHHH-HhcCHHHH
Confidence 9999998877665544444445664321100 00 11122 34577777
Q ss_pred HHHHHHHHHHHhhhhhhHHH-HHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHH
Q 018388 250 QAAVVAFFSGLSEGGMQASF-LYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 328 (357)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ 328 (357)
...+..++.........++. |.|.+ .+|+++.+.+......+++..++. ++.+++.||.+++..+..........++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~iig~-~~~~~l~~r~~~~~l~~~~~~~~~~~~~ 297 (394)
T PRK10213 220 AGMIAIFMSFAGQFAFFTYIRPVYMN-LAGFGVDGLTLVLLSFGIASFVGT-SLSSFILKRSVKLALAGAPLVLAVSALV 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHhccchhHHHHHHHHHHHHHHH
Confidence 76665555555555666666 55554 569999999999999999999988 8889999996544334433333444444
Q ss_pred HHHhcCcchHHHH-HHHHHHhhhcccc
Q 018388 329 ICSISWSAWVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 329 ~~~~~~~~~~~~~-~~~~~~~~~~~~p 354 (357)
+....++.+.... ..+.+++.+...|
T Consensus 298 l~~~~~~~~~~~~~~~l~G~~~~~~~~ 324 (394)
T PRK10213 298 LTLWGSDKIVATGVAIIWGLTFALVPV 324 (394)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHhhhH
Confidence 4444445544443 4555666666555
No 10
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=2.1e-30 Score=238.26 Aligned_cols=330 Identities=12% Similarity=0.100 Sum_probs=248.8
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
.+..+.+..++..++..+..+.+|.+.++ ++.+..+.|++.+.+.++..++.++.|+++||+|||+.++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGD--------LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLIST 74 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHH
Confidence 35567788888999999999999998764 3445567799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-
Q 018388 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (357)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l- 167 (357)
++..++.++++.+++ ++.+++.|+++|+ +.+...+...+++.|++|+|+|++++++......+|..+||.+++++
T Consensus 75 ~~~~~~~~~~~~~~~---~~~l~~~~~~~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 150 (485)
T TIGR00711 75 FAFTLGSLLCGVAPN---LELMIIFRVIQGF-GGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWII 150 (485)
T ss_pred HHHHHHHHHHhCcCC---HHHHHHHHHHHHh-hhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhc
Confidence 999999999999999 8899999999999 76777889999999999999999999999999999999999998875
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCccccccc----------ccccccCCCCCCCC---------
Q 018388 168 ---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEE----------TEGVNQNESNSPVK--------- 225 (357)
Q Consensus 168 ---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~--------- 225 (357)
+||+.|++.+.+.++..++..+..||+++.++++.|..+..... .+..+.++.+.+..
T Consensus 151 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (485)
T TIGR00711 151 ENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLV 230 (485)
T ss_pred cCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHH
Confidence 89999999888877776666677777554433333322211000 00000000000000
Q ss_pred ------ccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHH
Q 018388 226 ------IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQ 299 (357)
Q Consensus 226 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 299 (357)
..+.+++++..+ .+ ++++|+++...+..++..........++|.|+++.+|+++.+.+.......++..++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~ 308 (485)
T TIGR00711 231 AIIAFVVWELTDDNPLVD-LR-LFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSS 308 (485)
T ss_pred HHHHHHHHHHcCCCCccC-HH-HHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 000011111111 12 3457777777888888888888888999999999899999999999999999988888
Q ss_pred HHHHhhhhhccchhHHHHHHHHHHHHHHHHHHh--cC--cchHHHH-HHHHHHhhhccc
Q 018388 300 LLFMPLLAPILGEAKLLSLGLFAACINMFICSI--SW--SAWVPYA-TTAFSVLVVFAT 353 (357)
Q Consensus 300 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~--~~--~~~~~~~-~~~~~~~~~~~~ 353 (357)
++.+++.||+++|+.+..+..+.+++..++.+ .+ +.+.... ..+.+++.+...
T Consensus 309 -~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~ 366 (485)
T TIGR00711 309 -PIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFF 366 (485)
T ss_pred -HHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999998888888777663 22 2222222 345566655543
No 11
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.98 E-value=1.6e-30 Score=229.13 Aligned_cols=310 Identities=24% Similarity=0.295 Sum_probs=230.8
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHH
Q 018388 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (357)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~ 92 (357)
+++..++..++.....+.+|.+..+ +++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++..
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~ 73 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLAE-------ELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFA 73 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHC-------CSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHH-------ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhh
Confidence 3567788888999999999954432 455666778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----h
Q 018388 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----S 168 (357)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~ 168 (357)
++..+..++++ .+.+++.|++.|+ +.+...+...+++.|++|+|+|++++++.+...++|..+||.+++.+ +
T Consensus 74 ~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~ 149 (352)
T PF07690_consen 74 LGSLLLAFASN---FWLLLIARFLLGI-GSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG 149 (352)
T ss_dssp HHHHHHHHHCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH
T ss_pred hHHHHhhhhhh---HHHHhhhcccccc-ccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc
Confidence 99666666677 7789999999999 76788899999999999999999999999999999999999999885 7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccch
Q 018388 169 TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTL 248 (357)
Q Consensus 169 ~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (357)
||+.|++.+++.++..++...+.++++++++++.+.++ + ++.++++++.++.+++++.+
T Consensus 150 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~--------------~-------~~~~~~~~~~~~~~~~~~~~ 208 (352)
T PF07690_consen 150 WRWAFLISAILSLIAAILFILFLPEPPPPRERESPKES--------------E-------SKKPKPLKPGFKSLFKNPVL 208 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTT--------------T---------HHHCCCH-CTHHHHHHCC
T ss_pred cccccccccchhhhhhhhHhhhhhhccccccccccccc--------------c-------cccccccccccccccccchh
Confidence 99999999998887766555556655544433211000 0 00111222223335556766
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHhhhhhcccC-cchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHH
Q 018388 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFN-KNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (357)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~ 327 (357)
+......+...........++|.|+++.+|++ ..+.+.......+...+++ ++.+++.||+++++..........+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 287 (352)
T PF07690_consen 209 WILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGS-LLAGRLSDRFGRRRRLLIAILLLILGA 287 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 65566666666677788999999988888999 7888989999999999988 888999999998777776666666665
Q ss_pred HHHHhcC---cchHHH-HHHHHHHhhhccccc
Q 018388 328 FICSISW---SAWVPY-ATTAFSVLVVFATPS 355 (357)
Q Consensus 328 ~~~~~~~---~~~~~~-~~~~~~~~~~~~~p~ 355 (357)
+.+.+.. +....+ ...+.+++.+...|.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 319 (352)
T PF07690_consen 288 LGLLLLPFSSSPVWLIIALFLIGFGFGIVFPI 319 (352)
T ss_dssp HHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5544422 223333 345567766665553
No 12
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.98 E-value=3.5e-29 Score=224.80 Aligned_cols=302 Identities=14% Similarity=0.105 Sum_probs=229.0
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHH
Q 018388 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (357)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~ 92 (357)
+.+..++..++..++.|.+|.+.++ ++.+..+.++..+.+.++..++.++.|+++||+|||+++..+.....
T Consensus 18 ~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 89 (406)
T PRK15402 18 LVLFEFATYIANDMIQPGMLAVVED--------FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFI 89 (406)
T ss_pred HHHHHHHHHhhhhhHhcchHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 3444455556778888899987654 45556778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----h
Q 018388 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----S 168 (357)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~ 168 (357)
++.+.+..+++ ++.+++.|+++|+ +.+...+...+.+.|.+|+++|.+.++.......+|..+||.+++.+ +
T Consensus 90 ~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 90 LTCLAILLAQS---IEQFTLLRFLQGI-GLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred HHHHHHHHHcc---HHHHHHHHHHHHh-HhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999999998 8888999999999 66777788899999999999999999999888888889999888764 8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccch
Q 018388 169 TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTL 248 (357)
Q Consensus 169 ~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (357)
||+.|++.+++.++..+..++..||++++++++ .+ ..+..+..+..+++|.+
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~-~~~~~~~~~~~~~~~~~ 217 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAGRVGEK---------------------------LS-LKELGRDYKLVLKNRRF 217 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCcccccc---------------------------cc-HHHHHHHHHHHHcCcHH
Confidence 999999988887766665556667654322110 00 01112223345568888
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHH
Q 018388 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 328 (357)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ 328 (357)
+...+..++..........+.|.|+++.+|+++.+.+.......++..++. ++.+++.||+++|+.+..+.....++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~-~~~g~l~~r~~~~~~~~~~~~~~~~g~~ 296 (406)
T PRK15402 218 VAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGN-LTLARLTSRRPLRSLIRMGLWPMVAGLL 296 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 777777666666666667778888888789999888888777777777777 8889999999999999888887777766
Q ss_pred HHHhcC-----cchHHHH-HHHHHHhhhccccc
Q 018388 329 ICSISW-----SAWVPYA-TTAFSVLVVFATPS 355 (357)
Q Consensus 329 ~~~~~~-----~~~~~~~-~~~~~~~~~~~~p~ 355 (357)
++...+ +.+.... ..+.+.+.+...|.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~ 329 (406)
T PRK15402 297 LAALATVISSHAYLWLTAGLSLYAFGIGLANAG 329 (406)
T ss_pred HHHHHHHcccccHHHHHHHHHHHHHHHHHHhhh
Confidence 655421 2222222 45566676665543
No 13
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.98 E-value=2.6e-29 Score=224.00 Aligned_cols=306 Identities=12% Similarity=0.124 Sum_probs=220.9
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
|+++.++.+.++..++..+.....+.+.++ .+.+..+.+++.+.+.+++.++.|++|+++||+|||++++.+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~ 74 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKE--------LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIA 74 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHH
Confidence 356778889999998877776666766543 233456679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
.++..++.+.+.++++ . ++.|+++|+ +.+...|...+++.|++|+|+|++++++.+....+|.++||.++|.+
T Consensus 75 ~~~~~~~~~~~~~~~~---~---~~~r~l~G~-~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 75 NGIKLLGCLLMLFGIH---P---LLAYGLVGI-GAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHHHHHHHHH---H---HHHHHHHHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888777665 3 678999999 77888899999999999999999999999999999999999999986
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhc
Q 018388 168 ---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 244 (357)
Q Consensus 168 ---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (357)
.|+..+.+.+...++. .+..+.+||++++++++++ +..+...+.++..+.+++
T Consensus 148 ~~~~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~l~~ 203 (393)
T PRK11195 148 ADPHAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQSW-----------------------NPIALLRDFFHACRVLWR 203 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccCC-----------------------CHHHHHHHHHHHHHHHHh
Confidence 3455555554443322 3344567776533221100 000001112222334556
Q ss_pred ccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHH
Q 018388 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (357)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (357)
+|.+........+...........+|.|.++.+|.++.+.|......+++..+++ +..+++.||.++++.+..+.. .+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~-~~~~~l~~~~~~~~~~~~g~~-~~ 281 (393)
T PRK11195 204 DKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGA-GAAARLVTLETVLRVLPAGIL-MG 281 (393)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH-HHHHHHhcCCcccchHHHHHH-HH
Confidence 7776665555555555556667778888998899999999999999999999988 888999999888887777653 33
Q ss_pred HHHHHHHhcCcchHHHH-HHHHHHhhhcccc
Q 018388 325 INMFICSISWSAWVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 325 i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p 354 (357)
+....+.+.++.+.... ..+.+++.+...+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~ 312 (393)
T PRK11195 282 LVVLLMALQHSLLPAYPLLILIGALGGFFVV 312 (393)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhhhhhh
Confidence 44444444444443333 3455666665544
No 14
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=6.4e-29 Score=223.93 Aligned_cols=307 Identities=14% Similarity=0.091 Sum_probs=226.7
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
.+..+.+..++..+......+..|.+.+ +++++..+.|+..+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~--------~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~ 98 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQ--------AFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 3455666777778888888888898854 44666788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHH---HHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhH
Q 018388 89 TLSIIPLAIL---AYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (357)
Q Consensus 89 ~~~~~~~~~~---~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 165 (357)
++..++.+++ ..+++ ++.++++|+++|+ +.+...+..+.++.|..|+++|.+.++..+..+.+|..+||.+++
T Consensus 99 ~~~~~~~~l~~~~~~a~~---~~~ll~~r~l~G~-g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 99 FLYALGAALFWPAAEIMN---YTLFLVGLFIIAA-GLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHHHHHHHHHHHHHhcCC---HHHHHHHHHHHHH-HHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999875 45778 8899999999999 778888899999999877777777899999999999999987754
Q ss_pred H------------------------------hhhHHHHHHHHHHHH-HHHHHHHHhccCCCCCCCCCCCCcccccccccc
Q 018388 166 F------------------------------LSTTSAFQAATIVSM-LAAAYMRVFLKDDVPNDDDDDLTRPIITEETEG 214 (357)
Q Consensus 166 ~------------------------------l~~~~~f~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 214 (357)
. .+||++|+....+.. +..+......||.++++++
T Consensus 175 ~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~-------------- 240 (438)
T PRK10133 175 SLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS-------------- 240 (438)
T ss_pred HHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc--------------
Confidence 2 245666654333322 2222222233432111000
Q ss_pred cccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhh-hhhcccCcchHHHHHHHHHH
Q 018388 215 VNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL-KAQFHFNKNQFADLMLIAGL 293 (357)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ 293 (357)
+ .+..+..++. +.+.++|.++...+..++....+.....+.+.|+ ++.+|.++.+++.......+
T Consensus 241 ----------~---~~~~~~~~~~-~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~ 306 (438)
T PRK10133 241 ----------D---AKQGSFSASL-SRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMV 306 (438)
T ss_pred ----------c---ccccchhhhH-HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHH
Confidence 0 0000011121 2244577777777777777777777788888885 66779999999999999999
Q ss_pred HHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHhhhcccccC
Q 018388 294 AGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSV 356 (357)
Q Consensus 294 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 356 (357)
+..+++ +..+++.||+++|+++..+..+..+++.+..+.++.+......+++++.+..+|..
T Consensus 307 ~~~vG~-~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~ 368 (438)
T PRK10133 307 CFFIGR-FTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTI 368 (438)
T ss_pred HHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHH
Confidence 999999 89999999999999988888777777666555554333334566788888877753
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.97 E-value=6.7e-29 Score=223.10 Aligned_cols=300 Identities=15% Similarity=0.113 Sum_probs=224.4
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
+...+...++..++.....+..|.+.++ ++.+..+.|++.+.+.++..++.++.|+++||+|||+++..+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 17 IGLCFLVALLEGLDLQSAGVAAPRMAQE--------FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 3445566677778888888888888653 45566788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh--
Q 018388 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-- 167 (357)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-- 167 (357)
+..++.+++.++++ ++.+++.|+++|+ +.+...+...+++.|++|+|+|++++++.+....+|..++|.+++.+
T Consensus 89 ~~~~~~~~~~~~~~---~~~~~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 164 (406)
T PRK11551 89 LFGLFSLATAQAWD---FPSLLVARLLTGV-GLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG 164 (406)
T ss_pred HHHHHHHHHHHhcc---HHHHHHHHHHHHh-hHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999888999998 8889999999999 76777789999999999999999999999999999999999888664
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcc
Q 018388 168 --STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (357)
Q Consensus 168 --~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (357)
+||+.|++.+++.++..+...+.+||++++++++.+ + .+++...++..+. .++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------------------~---~~~~~~~~~~~~~-~~~ 219 (406)
T PRK11551 165 DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA---------------------G---KQRAPVLRALFGE-GRA 219 (406)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc---------------------c---hhhhhhHHHHhhh-hhh
Confidence 799999988776666655556667886543222100 0 0000001111110 012
Q ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHH
Q 018388 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (357)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i 325 (357)
+..+......+...........+.|.|+++. |+++.+.+.......++..+++ ++.+++.||+++|+.+..+.....+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~~ 297 (406)
T PRK11551 220 TATLLLWISYFFTLIVLYFLLNWLPSLLVGQ-GLSRSQAGLVQIAFNIGGALGS-LLIGALMDRLRPRRVVLLIYAGILA 297 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 2233333444444455666778899999885 9999999999999999999988 8889999999999998887777777
Q ss_pred HHHHHHhcCcchHHHH-HHHHHHh
Q 018388 326 NMFICSISWSAWVPYA-TTAFSVL 348 (357)
Q Consensus 326 ~~~~~~~~~~~~~~~~-~~~~~~~ 348 (357)
+...+.+.++.+.... ..+.+++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~g~~ 321 (406)
T PRK11551 298 SLAALAAAPSFAGMLLAGFAAGLF 321 (406)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHH
Confidence 7666666655544333 3333443
No 16
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.97 E-value=8.3e-29 Score=223.86 Aligned_cols=277 Identities=12% Similarity=0.058 Sum_probs=210.7
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
+....+..+...++.....+.+|.+.+ +++.+..+.|++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~ 96 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMPEMLA--------DLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHH
Confidence 334455666666666677778888865 456667788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh--
Q 018388 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-- 167 (357)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-- 167 (357)
+..++.++++++++ ++.+++.|++.|+ +.+...+...+++.|++|+|+|++++++.+...++|..++|.+++.+
T Consensus 97 ~~~~~~~~~~~~~~---~~~l~~~~~l~g~-~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 172 (434)
T PRK11663 97 ATGIINILFGFSSS---LWAFALLWVLNAF-FQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL 172 (434)
T ss_pred HHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 8888999999998 55666688999999999999999999999999999999999888764
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHH-Hhhhc
Q 018388 168 --STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI-CLLRS 244 (357)
Q Consensus 168 --~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 244 (357)
+||+.|++.+++.++..+...+.+||++++.+.+.+.+. .++.++. .++..+++.+.++.+ +...+
T Consensus 173 ~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~--------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 241 (434)
T PRK11663 173 HYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEW--------RHDALEL---AQQQEGAGLSRKEILTKYVLL 241 (434)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccc--------ccccccc---chhccccCCChhhhHHHHHhc
Confidence 899999998877666555555667776543221100000 0000000 000000111222222 22445
Q ss_pred ccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 018388 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL 310 (357)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 310 (357)
++.++...+..++.........+++|.|+++.+|++..+.+...+...++..+++ ++.+++.||+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~-~~~g~l~dr~ 306 (434)
T PRK11663 242 NPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGA-LVAGWGSDKL 306 (434)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-HHHhhhHHHh
Confidence 7788887777777777777888899999987789999999999999999999988 8999999998
No 17
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=4.7e-29 Score=222.87 Aligned_cols=300 Identities=11% Similarity=0.078 Sum_probs=226.2
Q ss_pred chhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhh
Q 018388 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (357)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l 84 (357)
+++|..+...+..++.........+.+|.+.+ +++++..+.|++.+.+.++..++.++.|+++||+|||+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~--------~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~ 75 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAE--------YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL 75 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 34555666677778887877888888888865 4566677889999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhh
Q 018388 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (357)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 164 (357)
..+.++..++..+..++++ ++.+++.|+++|+ +.+...+...+++.|.+|+|+|+++++..+....+|..++|.+.
T Consensus 76 ~~~~~~~~i~~~l~~~~~~---~~~~~~~~~l~G~-~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 151 (394)
T PRK03699 76 IFGFALMILAVAGLMFSHS---LALFSIAMFVLGV-VSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIA 151 (394)
T ss_pred HHHHHHHHHHHHHHHHcch---HHHHHHHHHHHHH-hhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988 8888999999999 66766678889999999999999999999888888888888776
Q ss_pred HHh-----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHH
Q 018388 165 RFL-----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (357)
Q Consensus 165 ~~l-----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (357)
+.+ +||+.|.+.+++.++..++.++ ++.|+.++++ + +++ ++ ..++
T Consensus 152 ~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~~~p~~~~~~-~---------------~~~----~~------~~~~-- 201 (394)
T PRK03699 152 AYLLARSIEWYWVYACIGLVYVAIFILTLF--SEFPALGKHA-P---------------KAD----KP------VAKE-- 201 (394)
T ss_pred HHHHhccccHHHHHHHHHHHHHHHHHHHHh--cCCccccccC-c---------------ccc----Cc------cccc--
Confidence 653 7999999888776555443322 2222111110 0 000 00 0000
Q ss_pred HhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Q 018388 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (357)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (357)
..++.++...+..++....+.....++|.|+++.+|+++.+.+.+.+...++..+++ ++.+++.||+++|+.+...
T Consensus 202 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~l~~~ 277 (394)
T PRK03699 202 ---KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGM-WIFSFIVRFFDLQRILTVL 277 (394)
T ss_pred ---cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHH-HHHHHHHHHhchhhHHHHH
Confidence 013455556666666666777888999999998889999999999999989888988 8889999999999988877
Q ss_pred HHHHHHHHHHHHhcCcchHHHH-HHHHHHhhh
Q 018388 320 LFAACINMFICSISWSAWVPYA-TTAFSVLVV 350 (357)
Q Consensus 320 ~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~ 350 (357)
..+..+...++...++.+.... ....+++.+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 309 (394)
T PRK03699 278 AGLALVLMYLFVNTDDPSHLLYAILGLGFFSS 309 (394)
T ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 7777666666655555443332 344454444
No 18
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=1.1e-28 Score=220.69 Aligned_cols=287 Identities=16% Similarity=0.150 Sum_probs=225.2
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
|.+.......+....+.....+.+|.+.++ ++.+..+.++..+.+.++..++.++.|+++||+|||+.+..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~ 74 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD--------LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPG 74 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHH
Confidence 345566777778888888888999998764 355566789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
.+...++..++..+++ .+.+++.|+++|+ +.+...+...+++.|.+|+|+|+++++..+....+|..++|.+++.+
T Consensus 75 ~~~~~i~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l 150 (392)
T PRK10473 75 AALFIIASLLCSLAET---SSLFLAGRFLQGI-GAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI 150 (392)
T ss_pred HHHHHHHHHHHHHhCc---HHHHHHHHHHHHh-hhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988 8888999999999 76777788999999999999999999999999999999999888764
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhh
Q 018388 168 ----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (357)
Q Consensus 168 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (357)
+||+.|++.+.+..+..++..+.+||++++++++ ..+ ..++..+ ..
T Consensus 151 ~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--------------------------~~~---~~~~~~~-~~ 200 (392)
T PRK10473 151 MLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPA--------------------------ASS---KPRENSE-SL 200 (392)
T ss_pred HhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCC--------------------------ccc---hHHHHHH-HH
Confidence 8999999988887777666666677764322110 000 0112122 23
Q ss_pred cccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHH
Q 018388 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (357)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (357)
++++++...+...+..........+.|.+.++.+|+++.+.+...+..++..+++. +..+++.||+++|+.+..+..+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~-~~~~~l~~r~g~~~~~~~~~~~~ 279 (392)
T PRK10473 201 LNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVS-FSTPFALGIFKPRTLMLTSQVLF 279 (392)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHH
Confidence 35555554444444444444556667888888889999999999999999999988 88899999999999999888888
Q ss_pred HHHHHHHHhcCcch
Q 018388 324 CINMFICSISWSAW 337 (357)
Q Consensus 324 ~i~~~~~~~~~~~~ 337 (357)
.++.+.+.+.++.+
T Consensus 280 ~~~~~~~~~~~~~~ 293 (392)
T PRK10473 280 LAAGITLALSPSHA 293 (392)
T ss_pred HHHHHHHHHHHHHH
Confidence 88777666654443
No 19
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=1.4e-28 Score=219.72 Aligned_cols=301 Identities=14% Similarity=0.110 Sum_probs=226.0
Q ss_pred hHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHH
Q 018388 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~ 90 (357)
.++....++...+.....|.+|.+.++ +.+.+..+.|++.+...+...+.+++.|+++||+|||+++..+.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~ 85 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVD-------QLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLM 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHH
Confidence 677788899999999999999998764 4567788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh---
Q 018388 91 SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--- 167 (357)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l--- 167 (357)
..++.+.+.++++ ++.+++.|+++|+ +.+...+...+++.|.+|+|+|++++++.+...++|..+||.+++.+
T Consensus 86 ~~~~~~~~~~~~~---~~~l~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~ 161 (400)
T PRK11646 86 RAAGFATMAIAHE---PWLLWLSCILSGL-GGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQY 161 (400)
T ss_pred HHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999888 8888999999999 66777788999999999999999999999999999999999999876
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccc
Q 018388 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 247 (357)
Q Consensus 168 ~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (357)
+||+.|++.+...++..++..+..||.++++++ . +.++.++...++|+
T Consensus 162 g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~----------------------------~----~~~~~~~~~~~~~~ 209 (400)
T PRK11646 162 DFRLVCATGAVLFVLAAAFNAWLLPAYKLSTVR----------------------------T----PVREGMTRVLRDKR 209 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcccccccc----------------------------h----hhHHHHHHHHcCch
Confidence 899999988877666555545555553211000 0 01111222345676
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHH
Q 018388 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (357)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~ 327 (357)
++...+..+...........++|.|.++..+ ++.+.+.+.+..++..........++..||++.++.+..+..+.+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 288 (400)
T PRK11646 210 FVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSM 288 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 6655544444443334456778999988744 777888888887777666563454445556776666777777777777
Q ss_pred HHHHhcCcchHHHH-HHHHHHhhhccccc
Q 018388 328 FICSISWSAWVPYA-TTAFSVLVVFATPS 355 (357)
Q Consensus 328 ~~~~~~~~~~~~~~-~~~~~~~~~~~~p~ 355 (357)
.++...++.+.... ..+++.+.+...|.
T Consensus 289 ~~l~~~~~~~~~~~~~~l~~~g~~~~~p~ 317 (400)
T PRK11646 289 FPIGMVSNLQQLFTLICLFYIGSIIAEPA 317 (400)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHcc
Confidence 77766666544433 34556666655554
No 20
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.97 E-value=4.1e-29 Score=222.92 Aligned_cols=281 Identities=11% Similarity=0.025 Sum_probs=209.8
Q ss_pred HhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccch
Q 018388 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI 104 (357)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~ 104 (357)
....|.+|.+.+ +++++..+.|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+.++++++
T Consensus 26 ~~~~~~lp~i~~--------~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~- 96 (393)
T PRK09705 26 TSVGPLLPQLRQ--------ASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQ- 96 (393)
T ss_pred hccchhHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcc-
Confidence 556688888865 45677788999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-----hhHHHHHHHHHH
Q 018388 105 SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAATIV 179 (357)
Q Consensus 105 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-----~~~~~f~~~~~~ 179 (357)
++.+++.|+++|+ +.+...+....++.|++| |+|+++++....+...|..+|+.+++++ +||+.+.+.++.
T Consensus 97 --~~~ll~~r~l~Gi-g~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~ 172 (393)
T PRK09705 97 --SALLLSSALLGGV-GIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALP 172 (393)
T ss_pred --hHHHHHHHHHHHh-HHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 8889999999999 777777888899999987 7899999999988888888887777653 799887766555
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHH
Q 018388 180 SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 259 (357)
Q Consensus 180 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (357)
.++... .++...+++++++++ + +.+ . ++ ..++++.+...+..++..
T Consensus 173 ~~~~~~-~~~~~~~~~~~~~~~-------------------~------~~~---~-~~----~l~~~~~~~l~~~~~~~~ 218 (393)
T PRK09705 173 AVVALF-AWWWQSAREVASSHK-------------------T------TTT---P-VR----VVFTPRAWTLGVYFGLIN 218 (393)
T ss_pred HHHHHH-HHHHHhcCCCccccC-------------------C------CcC---C-cc----cccCHhHHHHHHHHHHHH
Confidence 433322 222222211110000 0 000 0 11 123455666666666667
Q ss_pred HhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcchHH
Q 018388 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVP 339 (357)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 339 (357)
..+....+++|.|+++ +|.+..+.+...+..+++.++++ +..+++.||+++|+.+..+..+..++...+...+.....
T Consensus 219 ~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~-~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 296 (393)
T PRK09705 219 GGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGA-LLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV 296 (393)
T ss_pred HHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHH-HHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHH
Confidence 7777888999999988 59999999999999999999998 888999999999999888888777776655433322222
Q ss_pred HHHHHHHHhhhcccc
Q 018388 340 YATTAFSVLVVFATP 354 (357)
Q Consensus 340 ~~~~~~~~~~~~~~p 354 (357)
....+.+++.+...|
T Consensus 297 ~~~~l~g~g~g~~~~ 311 (393)
T PRK09705 297 LWAMVCGLGLGGAFP 311 (393)
T ss_pred HHHHHHHHhccchHH
Confidence 223344555554444
No 21
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=7.5e-29 Score=222.36 Aligned_cols=301 Identities=13% Similarity=0.128 Sum_probs=219.4
Q ss_pred HHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHH
Q 018388 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (357)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~ 93 (357)
.+..+...++..+..|.+|.+.++ ++.+....++..+++.++..++++++|+++||+|||++++.+.++..+
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i~~~--------~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 93 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINVVRD--------FNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTL 93 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHH
Confidence 444455666778889999987653 455556778899999999999999999999999999999999999999
Q ss_pred HHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hh
Q 018388 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----ST 169 (357)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~ 169 (357)
+.+++.++++ ++.++++|+++|+ +.+...+....++.|.+|+|+|++++++......+|..+||.+++.+ +|
T Consensus 94 ~~~~~~~a~~---~~~l~~~r~l~Gi-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw 169 (413)
T PRK15403 94 ACAATLFTTS---MTQFLIARFIQGT-SICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHW 169 (413)
T ss_pred HHHHHHHcCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 9999999999 8899999999999 55665667788899999999999999999999999999999988764 89
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchH
Q 018388 170 TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLS 249 (357)
Q Consensus 170 ~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (357)
|+.|++.+++.++..+..++.+||++++++++ .+.....++ .+...+||.++
T Consensus 170 ~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~---------------------------~~~~~~~~~-~~~ll~~~~~~ 221 (413)
T PRK15403 170 KVLFAIIAVMGLIAFVGLLLAMPETVKRGAVP---------------------------FSAKSVLRD-FRNVFRNRLFL 221 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccccCCC---------------------------CChHHHHHH-HHHHHcCHHHH
Confidence 99999998887776666566678764321110 001112233 23345688888
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHH
Q 018388 250 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI 329 (357)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 329 (357)
...+..++..........+.|.++++.+|.++.+.++.......+..++. .+.+++.+|..+++.......+..++..+
T Consensus 222 ~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~-~l~~~~~~~~~~~~~~~~~~~~~~ig~~l 300 (413)
T PRK15403 222 TGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVAN-AIVARFVKDPTEPRFIWRAVPIQLVGLAL 300 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhccCCchhHHHHHHHHHHHHHHH
Confidence 88888777777777778888999999989999999998877777777777 55566554433333332222222233222
Q ss_pred HH----hcCcchH-HHH-HHHHHHhhhccccc
Q 018388 330 CS----ISWSAWV-PYA-TTAFSVLVVFATPS 355 (357)
Q Consensus 330 ~~----~~~~~~~-~~~-~~~~~~~~~~~~p~ 355 (357)
+. ..++.+. .+. ..++++|.+...|.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~ 332 (413)
T PRK15403 301 LIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPT 332 (413)
T ss_pred HHHHHHHccccHHHHHHHHHHHHHHHHHHhHH
Confidence 21 1233322 222 44566776666554
No 22
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.97 E-value=6.2e-29 Score=221.21 Aligned_cols=279 Identities=15% Similarity=0.115 Sum_probs=213.5
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcch
Q 018388 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA 82 (357)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~ 82 (357)
|++++++++.+....++..++.....|.+|.+.++ .+.+..+.|++.+.+.++..+++++.|+++||+|||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--------~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~ 72 (381)
T PRK03633 1 MSTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ--------EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR 72 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 56778889999999999999999999999999874 4556678899999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHh
Q 018388 83 MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (357)
Q Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (357)
.+..+.++..++..+++++++ ++.+++.|+++|+ +.+...+...+.+.|..++++|+++++......++|..+||.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 148 (381)
T PRK03633 73 SYYLASLIFAAGCAGLGLMVG---FWSWLAWRFVAGI-GCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQL 148 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 8899999999999 667777788888888899999999999999999999999999
Q ss_pred hhHHhhh---HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHH
Q 018388 163 AARFLST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (357)
Q Consensus 163 ~~~~l~~---~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (357)
+++.+.. +...+..+......... .+ .+.++++++++ +..+.++
T Consensus 149 ~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~-----------------------------~~~~~~~-- 195 (381)
T PRK03633 149 LVSKVSTELMSVLPWVTGLVLAAILPL-LF-TRILNQQAENH-----------------------------DSTSIWP-- 195 (381)
T ss_pred HHhcccccccchHHHHHHHHHHHHHHH-HH-hcccCCCCCCC-----------------------------CCCCHHH--
Confidence 9987622 22233332222211111 11 12111110000 0011122
Q ss_pred HhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Q 018388 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (357)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (357)
..++|..+......+..........+++|.|.++. |.++.+.+...+...+...+++ +..+++.||+++|+.+..+
T Consensus 196 --~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~~~~~~l~~~ 271 (381)
T PRK03633 196 --MLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQ-GMSDASIGFWMALLVSAGILGQ-WPIGRLADRFGRLLVLRVQ 271 (381)
T ss_pred --HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHcCcHHHHHHH
Confidence 22355555544444444455666778899999875 9999898999998888888988 7889999999999998888
Q ss_pred HHHHHHHHHHH
Q 018388 320 LFAACINMFIC 330 (357)
Q Consensus 320 ~~~~~i~~~~~ 330 (357)
.....++....
T Consensus 272 ~~~~~~~~~~~ 282 (381)
T PRK03633 272 VFVVILGSIAM 282 (381)
T ss_pred HHHHHHHHHHH
Confidence 77777765444
No 23
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=1.2e-28 Score=218.55 Aligned_cols=293 Identities=18% Similarity=0.185 Sum_probs=216.8
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
.++..++..++...+.....|..|.+.++ +++++..+.|++.+++.++..++.++.|+++||+|||+.+..+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKD-------DLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSL 74 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHH-------HhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 34567778888888888899999975543 55677788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcc-chhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH-
Q 018388 89 TLSIIPLAILAYRR-SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (357)
Q Consensus 89 ~~~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~- 166 (357)
++..++.+++.+++ + ++.+++.|+++|+ +.+.. +...+++.|++|+|+|++++++......+|..+++.+++.
T Consensus 75 ~~~~i~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 75 LLLAIPCLWAGLAVQS---YSVLLLLRLFIGI-AGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred HHHHHHHHHHHHHhhh---HHHHHHHHHHHHH-hchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999999998 8 8888999999999 54544 5678999999999999999999987777776666555432
Q ss_pred -------------hhhHHHH-HHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccc
Q 018388 167 -------------LSTTSAF-QAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI 232 (357)
Q Consensus 167 -------------l~~~~~f-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (357)
.+||+.| +..+++..+..++.....+|++++++++.+. +.++.. .. .++
T Consensus 150 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----~~--~~~ 212 (366)
T TIGR00886 150 IGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKL-----------SFKGAR----WS--VGT 212 (366)
T ss_pred HHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhc-----------cccccc----cc--ccc
Confidence 2699998 4445554444445455566654332211000 000000 00 001
Q ss_pred hhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccch
Q 018388 233 PSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE 312 (357)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 312 (357)
+..++..+ ..++|+++...+..++..........+.|.|+++.+|+++.+.+.+.....+...+++ ++.+++.||+++
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~g~ 290 (366)
T TIGR00886 213 GALGDQLK-VFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLAR-PLGGAISDRLGG 290 (366)
T ss_pred hhHHHHHH-HHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHh-hccchHHHhhcc
Confidence 11122233 3346777777777777767777888999999999899999999988888888888888 888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 018388 313 AKLLSLGLFAACINMFICSI 332 (357)
Q Consensus 313 ~~~~~~~~~~~~i~~~~~~~ 332 (357)
|+.+..+......+..++.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~ 310 (366)
T TIGR00886 291 ARKLLMSFLGVAMGAFLVVL 310 (366)
T ss_pred chhHHHHHHHHHHHHHHHHh
Confidence 88877777666666555444
No 24
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.97 E-value=2.1e-29 Score=229.93 Aligned_cols=291 Identities=12% Similarity=0.057 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHH
Q 018388 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (357)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~ 91 (357)
...+..++..++.....+..|.+.+ +++++..+.|++.+.+.+++.++.++.|+++||+|||+++..+.++.
T Consensus 33 ~~~~~~~~~y~~r~~~~~~~~~i~~--------~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 104 (467)
T PRK09556 33 VVFIGYLTMYLIRKNFKAAQNDMIS--------TYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS 104 (467)
T ss_pred HHHHHHHHHHHHhcChhhhhHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH
Confidence 3344445555566777778888765 45667788899999999999999999999999999999999888887
Q ss_pred HHHHHHHHH-----ccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 92 IIPLAILAY-----RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 92 ~~~~~~~~~-----~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
++.....+. +++ ++.+++.|+++|+ +.+...|...+++.|++|+++|++++++.+...++|..+++.++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~ 180 (467)
T PRK09556 105 AICMLGFGASLGSGSVS---LGLMIALWALSGF-FQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALW 180 (467)
T ss_pred HHHHHHHHHHHhcccch---HHHHHHHHHHHHH-HHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHH
Confidence 777666554 467 8899999999999 6666678899999999999999999999999999999999877653
Q ss_pred h-------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHH-H
Q 018388 167 L-------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD-L 238 (357)
Q Consensus 167 l-------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 238 (357)
+ +||..|.+.+++.++..++.++..++++++.+...+ ++.. ++.. .+++ ++.+ +++.+.++ .
T Consensus 181 ~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~-~~~~----~~~~--~~~~--~~~~-~~~~~~~~~~ 250 (467)
T PRK09556 181 GANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKA-EEIF----GEPI--SEED--KETE-STDMTKWQIF 250 (467)
T ss_pred HHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCCh-hhcc----cCcc--chhh--hccc-cccCcHHHHH
Confidence 2 488888887777666666656666665543221111 0000 0000 0000 0000 00111122 1
Q ss_pred HHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHH
Q 018388 239 ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSL 318 (357)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (357)
.+...++|.++...+..++......+...++|.|+++.+|++..+.+...+...++..++. ++.|++.||+++|+....
T Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~g~r~~~~~ 329 (467)
T PRK09556 251 VEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGS-LLWGWLSDLANGRRALVA 329 (467)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCchHHH
Confidence 2224568889988888888888888889999999998889999999999888888888888 899999999998887665
Q ss_pred HHHHHHH
Q 018388 319 GLFAACI 325 (357)
Q Consensus 319 ~~~~~~i 325 (357)
......+
T Consensus 330 ~~~~~~~ 336 (467)
T PRK09556 330 CIALALI 336 (467)
T ss_pred HHHHHHH
Confidence 5444333
No 25
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=1.5e-28 Score=218.48 Aligned_cols=295 Identities=15% Similarity=0.142 Sum_probs=216.6
Q ss_pred HHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH-HHHHHH
Q 018388 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL-PLTLSI 92 (357)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~-~~~~~~ 92 (357)
.+..++..++.++..|.+|.+.++ +++.+..+.|++.+.+.+...+.+++.|+++||+||||.++. +.+...
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~-------~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~ 75 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSE-------EVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAA 75 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHc-------ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 456788889999999999998754 456677889999999999999999999999999999987654 556666
Q ss_pred HHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHH--HHHHHHHHHHHHHhhHhhhHHh---
Q 018388 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASA--FGILLGVLSASFVCGTLAARFL--- 167 (357)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l--- 167 (357)
++..++.++++ ++.+++.|++.|. ..+...|...++..|..|+++|++. .+......++|..+||.+++.+
T Consensus 76 ~~~~~~~~~~~---~~~l~~~~~~~g~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 151 (375)
T TIGR00899 76 LACLLFAWNRN---YFLLLVLGVLLSS-FASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG 151 (375)
T ss_pred HHHHHHHhcch---HHHHHHHHHHHHh-hhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh
Confidence 77788888888 8888889999887 5566678888899998887777654 5777888889999999888765
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhccc
Q 018388 168 -STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSV 246 (357)
Q Consensus 168 -~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (357)
+||+.|++.+++.++..+..++.+||++++++++ +++.+.++ .++++
T Consensus 152 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~----~~~~~ 199 (375)
T TIGR00899 152 FGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA----------------------------LTRLEVRG----LLASR 199 (375)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc----------------------------cCcchhhh----hhcCc
Confidence 8999999998887777666666688765432211 00001111 23456
Q ss_pred chHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHH
Q 018388 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (357)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~ 326 (357)
+++......++..........++|.|+++.+|.++.+.+...........++. ++.+++.||+++|+.+..+.....+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~~~~~ 278 (375)
T TIGR00899 200 DTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFM-LLAGYLIKRFGKRRLMLLAALAGVAF 278 (375)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhcchhHHHHHHHHHHHH
Confidence 66655555555555555567778999888889999998888777766666666 78899999999999888777766665
Q ss_pred HHHHHhcCcchHHHH-HHHHHHhhhcc
Q 018388 327 MFICSISWSAWVPYA-TTAFSVLVVFA 352 (357)
Q Consensus 327 ~~~~~~~~~~~~~~~-~~~~~~~~~~~ 352 (357)
...+.+.++.+..+. ..+.+++.+..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~g~~~g~~ 305 (375)
T TIGR00899 279 YTGLAADNSLWALLMLQLLNAIFIGIL 305 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555555444433 23334444443
No 26
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=6.5e-29 Score=223.15 Aligned_cols=300 Identities=14% Similarity=0.169 Sum_probs=215.1
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++.+...++..+.+.++.....+..|.+.+ +++.+..+.|++.+++.++..+++++.|+++||+|||+++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~ 82 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAG--------EFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVT 82 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 455677888999999999999999998865 345666778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
+.++..++.+++.++++ ++.+++.|++.|+ +.+...+...+++.|++|+|+|++++++.+....+|..++|.+++.
T Consensus 83 ~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 83 SIVLFSAGTLACGFAPG---YITMFIARLVIGI-GMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHh-hhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 8889999999999 6677778999999999999999999999999999999999988776
Q ss_pred h----h--hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHH
Q 018388 167 L----S--TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (357)
Q Consensus 167 l----~--~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (357)
+ + ||+.|++.++..++. ++.....||+++.++++++.+.. .+..++..++++..+. ..++......+
T Consensus 159 l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 231 (405)
T TIGR00891 159 VVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAEDWKEKHAGKALV----RTMVDILYGGEHRIAN--IVMTLAAAMVQ 231 (405)
T ss_pred HHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHhhhhhhh----hhHHHHHhccchhhhh--hhhhhhHHhhh
Confidence 4 4 999998876554443 33445567765432221110000 0000000000000000 00000011111
Q ss_pred hhhcccc-hHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Q 018388 241 LLRSSVT-LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (357)
Q Consensus 241 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (357)
...+++. +........+..........++|.|+++.+|++..+.+.+.+...++..++. ++.+++.||+++|+.+..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~g~~~~~~~~ 310 (405)
T TIGR00891 232 SAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGG-CVFGFLGDWLGRRKAYVCS 310 (405)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCchhhhHHH
Confidence 1111111 2222333333344445667788999988889999999999999999999988 8889999999999988877
Q ss_pred HHHHHHH
Q 018388 320 LFAACIN 326 (357)
Q Consensus 320 ~~~~~i~ 326 (357)
.....+.
T Consensus 311 ~~~~~~~ 317 (405)
T TIGR00891 311 LLAGQLL 317 (405)
T ss_pred HHHHHHH
Confidence 7665333
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=3.1e-29 Score=224.38 Aligned_cols=275 Identities=16% Similarity=0.135 Sum_probs=211.8
Q ss_pred HHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHH
Q 018388 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (357)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~ 97 (357)
++..++.....+..|.+.+ +++.+..+.|++.+++.++..++.++.|+++||+|||+++..+.++..++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~--------~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~ 75 (399)
T TIGR00893 4 VINYLDRANLSFAAPMLQE--------DLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGL 75 (399)
T ss_pred hHHHHHHHhhhHhHHHHHH--------hhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHH
Confidence 3455566666677777654 44566678899999999999999999999999999999999999999999999
Q ss_pred HHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHH
Q 018388 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAF 173 (357)
Q Consensus 98 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f 173 (357)
++++++ ++.+++.|++.|+ +.+...+...+++.|++|+|+|++++++.+....+|..++|.+++.+ +||+.|
T Consensus 76 ~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 151 (399)
T TIGR00893 76 QAFAGA---YVSLYILRVLLGA-AEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAF 151 (399)
T ss_pred HHHHcC---HHHHHHHHHHHHH-HHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHH
Confidence 999998 8999999999999 67777889999999999999999999999999999999999988864 899999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHH
Q 018388 174 QAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAV 253 (357)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (357)
++.+++.++..+...+..||++++++...+.++.... +.. ..+.+.++++.+.....+ ...++|+++...+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 222 (399)
T TIGR00893 152 IIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVV--GGL---LAEQQGKGPSTPKKYQIK----ELLKDRRVWGLAL 222 (399)
T ss_pred HHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcc--hhh---ccccccccccCCCccchH----HHhcCHHHHHHHH
Confidence 9988887776666666667655432221110000000 000 000000001111111222 2445788888888
Q ss_pred HHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhH
Q 018388 254 VAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (357)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (357)
..++..........+.|.|+++.+|.++.+.+.......+...++. ++.+++.||+++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 223 GQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGM-ILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHhhcc
Confidence 8888888888899999999998889999999999999999998988 88899999999885
No 28
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=4.6e-28 Score=213.10 Aligned_cols=270 Identities=12% Similarity=0.031 Sum_probs=196.0
Q ss_pred HHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHH
Q 018388 20 WGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA 99 (357)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~ 99 (357)
+......+.|.+|.+.+ +++++..+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.....
T Consensus 3 ~~~~~~~~~~~lp~i~~--------~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~ 74 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAE--------DIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLL 74 (368)
T ss_pred hhHHHHHHHhhHHHHHH--------HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 44566777889999876 4566678889999999999999999999999999999887665555544433233
Q ss_pred HccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHH
Q 018388 100 YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQA 175 (357)
Q Consensus 100 ~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~ 175 (357)
..++ ++.+++.|+++|+ +.+.. +.....++|++|+|+|++++++.+.+..+|..+++.+++.+ +||+.|++
T Consensus 75 ~~~~---~~~l~~~R~l~G~-g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~ 149 (368)
T TIGR00903 75 DPFN---YEWLLACQLLAAL-GQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIP 149 (368)
T ss_pred Hhcc---HHHHHHHHHHHHh-HhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 3367 8899999999999 66654 56667779999999999999999999999999999888876 99999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHH
Q 018388 176 ATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVA 255 (357)
Q Consensus 176 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (357)
.++++++..++.++.+||++++++++ .+ . .+..++ ++.+.++|.++...+..
T Consensus 150 ~~~l~~~~~~~~~~~lp~~p~~~~~~-----------------------~~-~---~~~~~~-~~~ll~~~~~~~~~~~~ 201 (368)
T TIGR00903 150 IAAVAAAGIILVLAALPALPFQAAEG-----------------------FG-F---KDAVKE-FGALAGRKDLWIIGAIL 201 (368)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCC-----------------------cc-h---HHHHHH-HHHHHcChhHHHHHHHH
Confidence 88887777777777889876542210 00 0 001122 22345689999999999
Q ss_pred HHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccch---hHH-HHHHHHHHHHHHHHHH
Q 018388 256 FFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE---AKL-LSLGLFAACINMFICS 331 (357)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~-~~~~~~~~~i~~~~~~ 331 (357)
++.........+|+|.|+++. |++.. .+.........+.++. +++.||..| |+. ........++....+.
T Consensus 202 ~~~~~~~~~~~~wlp~~L~~~-g~s~~-~~~~~~l~~~~g~~g~----~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~ 275 (368)
T TIGR00903 202 GFGVALFDNLAIWLEAALRPA-GLEDI-AGDAVALAILAGLIGV----AVIPDRVARAGLRSIYIRAAALLIAAFFLALA 275 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCChH-HHHHHHHHHHHHHHHH----HHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999874 78764 4666555555555544 566666543 333 3223444444444444
Q ss_pred hcCcc
Q 018388 332 ISWSA 336 (357)
Q Consensus 332 ~~~~~ 336 (357)
+..+.
T Consensus 276 ~~~~~ 280 (368)
T TIGR00903 276 FELNR 280 (368)
T ss_pred Hcccc
Confidence 44443
No 29
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=5.3e-28 Score=221.74 Aligned_cols=295 Identities=15% Similarity=0.109 Sum_probs=204.6
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++.+....++.+++.++..++....|.+.++.. ++.++. .+....-.+.++..++..+++++.|+++||+|||+++..
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~-~~~~~~-~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFF-PGADPS-VQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 345566678999999999998888887766532 222221 111111113577889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhHH-----HHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhH
Q 018388 87 PLTLSIIPLAILAYRRSISFF-----YAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (357)
+.++.+++++++++++++..+ ..++++|+++|+ +.|...+...++++|++|+|+|++..++...+..+|..+|+
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~-g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~ 171 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGF-SVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGA 171 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh-HhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999994321 247899999999 77888899999999999999999999999988888888776
Q ss_pred hhhH------------HhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCcccc
Q 018388 162 LAAR------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVC 229 (357)
Q Consensus 162 ~~~~------------~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (357)
.+.. ..|||++|++.+++.++ .++....+||+++..+.+++.+ +.+++ .. .+
T Consensus 172 ~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~----------~~~~~--~~---~~ 235 (490)
T PRK10642 172 GVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLE----------QGDRE--GL---QD 235 (490)
T ss_pred HHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhh----------hhccc--cc---cc
Confidence 5432 24899999998765444 3334556788765322110000 00000 00 00
Q ss_pred ccchhHHHHHHhhhccc-chHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018388 230 KKIPSIRDLICLLRSSV-TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP 308 (357)
Q Consensus 230 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (357)
++..++++.. ++++ .+.......++....++....++|.|+++.+|++..+.+.......++..++. ++.+++.|
T Consensus 236 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d 311 (490)
T PRK10642 236 GPKVSFKEIA---TKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQ-PVMGLLSD 311 (490)
T ss_pred cccCCHHHHH---HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 1111333322 2222 22222333344556677788899999988789988877777777777777777 78899999
Q ss_pred ccchhHHHHHHHHHHH
Q 018388 309 ILGEAKLLSLGLFAAC 324 (357)
Q Consensus 309 ~~~~~~~~~~~~~~~~ 324 (357)
|+|||+.+..+.....
T Consensus 312 r~grr~~~~~~~~~~~ 327 (490)
T PRK10642 312 RFGRRPFVILGSVALF 327 (490)
T ss_pred HhccHHHHHHHHHHHH
Confidence 9999998877765433
No 30
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.97 E-value=1.4e-27 Score=214.83 Aligned_cols=311 Identities=18% Similarity=0.193 Sum_probs=227.5
Q ss_pred chhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhh
Q 018388 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (357)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l 84 (357)
+|++++..+++..++...+.....|.+|.+.++. +.++.+....+.|++.+++.++..++.+++|+++||+|||+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 87 (408)
T PRK09874 11 NWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQL---GVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML 87 (408)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHh---CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH
Confidence 4677788888999999999999999999998762 1222222234569999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhh
Q 018388 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (357)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 164 (357)
..+.+...++..++.++++ ++.+++.|++.|+ +.+. .+....++.|..|+|+|++++++......+|..++|.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (408)
T PRK09874 88 LRSALGMGIVMVLMGLAQN---IWQFLILRALLGL-LGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAG 162 (408)
T ss_pred HHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHH-hhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888888 8889999999998 5454 477888999999999999999999999999999999888
Q ss_pred HHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHH
Q 018388 165 RFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (357)
Q Consensus 165 ~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (357)
+.+ +||+.|++.+++.++..+...+..||++++.+++ +..+.++..+
T Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~ 213 (408)
T PRK09874 163 GLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKK-----------------------------EMLHMREVVT 213 (408)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccch-----------------------------hhhHHHHHHH
Confidence 764 8999999988887766666666677654222110 0011223333
Q ss_pred hhhcccchHH-HHHHHHHHHHhhhhhhHHHHHhhhhhcccCcc---hHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHH
Q 018388 241 LLRSSVTLSQ-AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN---QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (357)
Q Consensus 241 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (357)
.++ +++.+. .....+...........+++.|..+..+.... ..+.+....+++..++. ...+++.||+++|+.+
T Consensus 214 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~~~g~l~dr~g~~~~~ 291 (408)
T PRK09874 214 SLK-NPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSA-PRLGKLGDRIGPEKIL 291 (408)
T ss_pred hCc-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccccchhH
Confidence 343 444433 33434444455556677788888876332221 13445555666667777 7779999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCcchHHHH-HHHHHHhhhcccc
Q 018388 317 SLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 317 ~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p 354 (357)
..+.....++.+...+.++.+..+. ..+.+++.+...|
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 330 (408)
T PRK09874 292 ITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLP 330 (408)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHH
Confidence 8888887777766666665555444 3455666665554
No 31
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=8.9e-28 Score=214.67 Aligned_cols=308 Identities=15% Similarity=0.102 Sum_probs=231.1
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
.+..+....++..+..++..|.+|.+.+ +++.+..+.|++.+.+.+++.+++++.|++.||+|||+.+..+.
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~--------~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~ 75 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQ--------AFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGL 75 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 4566777778888888899999999865 45666788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-
Q 018388 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (357)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l- 167 (357)
++.+++..++..+.....++.+++.|++.|+ +.+...+....++.+..|+|+|++.+++.+...++|..+||.+++.+
T Consensus 76 ~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 76 FLYALGAFLFWPAAEIMNYTLFLVGLFILTA-GLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHh-hHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998886544211128889999999999 77888889999999999999999999999999999999998887644
Q ss_pred -----------------------------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccC
Q 018388 168 -----------------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQN 218 (357)
Q Consensus 168 -----------------------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (357)
+||++|++.+++.++..+... +.++++.+++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~-~~~~p~~~~~~~----------------- 216 (410)
T TIGR00885 155 LSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM-LTKMPALNHSDA----------------- 216 (410)
T ss_pred hcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCCcccc-----------------
Confidence 499999988887665544332 222211111000
Q ss_pred CCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhc-ccCcchHHHHHHHHHHHHHH
Q 018388 219 ESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF-HFNKNQFADLMLIAGLAGTI 297 (357)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~ 297 (357)
. +.+..++.+ .+.|+|.++...+..+++...+....++++.|.++.. +.+....+...+.......+
T Consensus 217 ------~--~~~~~~~~~----~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~v 284 (410)
T TIGR00885 217 ------K--QISFSASLS----RLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFI 284 (410)
T ss_pred ------c--cccchhhHH----HHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 0 000011112 2445777888788888888888788899999987642 33334445555666666778
Q ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHhhhcccccC
Q 018388 298 SQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSV 356 (357)
Q Consensus 298 ~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 356 (357)
++ ++.+++.||+++|+.+.+......+..++..+.++....+...+.++..+..+|++
T Consensus 285 GR-~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i 342 (410)
T TIGR00885 285 SR-FIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTI 342 (410)
T ss_pred HH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHH
Confidence 88 89999999999999998888888888877777666555555666677777766653
No 32
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=7.3e-28 Score=217.76 Aligned_cols=292 Identities=13% Similarity=0.126 Sum_probs=212.0
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++.+...++..+.+.++.....+..|.+.+ +++++..+.+++.+++.++..+++++.|+++||+|||+++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--------~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~ 88 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYIMYLIKA--------DLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMW 88 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 445667778888888888888888888765 445566778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
+.++.+++..+++++++ ++.++++|+++|+ +.+...+....++.|++|+|+|++++++...+.++|.+++|.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 89 SIVAYSVGTGLSGLASG---VIMLTLSRFIVGM-GMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHHHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999 8999999999999 6677778899999999999999999999999999999999887765
Q ss_pred h----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhh
Q 018388 167 L----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (357)
Q Consensus 167 l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (357)
+ +||+.|++..... +..+......||+++.++++.+ .+ ++ ..+. .......+ .+.+
T Consensus 165 l~~~~~w~~~f~i~~~~~-~~~~~~~~~~p~~~~~~~~~~~-------------~~-~~--~~~~--~~~~~~~~-~~~~ 224 (426)
T PRK12307 165 FAEAYGWRAAFFVGLLPV-LLVIYIRARAPESKEWEEAKLS-------------GK-GK--HSQS--AWSVFSLS-MKGL 224 (426)
T ss_pred HcccCCHHHHHHHHHHHH-HHHHHHHHHCCCChHHHHhhhh-------------cc-cc--cccc--chhhhhHH-HHHH
Confidence 3 8999998764432 2222222223443221111000 00 00 0000 00000011 2223
Q ss_pred hcccchHHHHHHHH---HHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Q 018388 243 RSSVTLSQAAVVAF---FSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (357)
Q Consensus 243 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (357)
.+++.++....... ...........++|.|+++. |.++.+.+...+...++..+++ ++.+++.||+++|+.+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~~~~~~ 302 (426)
T PRK12307 225 FNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGN-IVWGLCADRIGLKKTFSIG 302 (426)
T ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHH
Confidence 44555544333222 22223334577889999885 9999888998898889988888 8889999999999998888
Q ss_pred HHHHHHHHHHHHh
Q 018388 320 LFAACINMFICSI 332 (357)
Q Consensus 320 ~~~~~i~~~~~~~ 332 (357)
..+..+..+.+..
T Consensus 303 ~~~~~~~~~~~~~ 315 (426)
T PRK12307 303 LLMSFLFIFPLFR 315 (426)
T ss_pred HHHHHHHHHHHHH
Confidence 8777666554443
No 33
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=1.2e-27 Score=216.35 Aligned_cols=279 Identities=11% Similarity=0.024 Sum_probs=200.5
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
+....++.+++.++...+....|.+.++....+.++ .+..+.+.+.+...++..++++++|+++||+|||+++..+.+
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 101 (432)
T PRK10406 24 IVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTT--TQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVC 101 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 334456688889999887777777766532111121 222234555566677777999999999999999999999999
Q ss_pred HHHHHHHHHHHccchhH-----HHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhh
Q 018388 90 LSIIPLAILAYRRSISF-----FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (357)
Q Consensus 90 ~~~~~~~~~~~~~~~~~-----~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 164 (357)
+.+++++++++++++.+ ...+++.|+++|+ +.|...+...+++.|+.|+|+|++..+..+.....|..+++.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~-g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~ 180 (432)
T PRK10406 102 MMCFGSLVIACLPGYETIGTWAPALLLLARLFQGL-SVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV 180 (432)
T ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHh-hhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988421 2468899999999 77888899999999999999999999998888888877776543
Q ss_pred H------------HhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccc
Q 018388 165 R------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI 232 (357)
Q Consensus 165 ~------------~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (357)
. ..+||++|++.+++.++. +.....+||+++.++++ .++.
T Consensus 181 ~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~~~~~~~---------------------------~~~~ 232 (432)
T PRK10406 181 VVLQQTLEDAELREWGWRIPFALGAVLAVVA-LWLRRQLDETSQQETRA---------------------------LKEA 232 (432)
T ss_pred HHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHhcCCCCchHHHhh---------------------------hccc
Confidence 2 248999999887765543 33334455543321110 0001
Q ss_pred hhHHHHHHhhhcccchHHHHHHHHH-HHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 018388 233 PSIRDLICLLRSSVTLSQAAVVAFF-SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG 311 (357)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 311 (357)
.++++ ++++++.+...+..++ .........+|+|.|+++.+|.+..+.+...........+++ .+.|++.||++
T Consensus 233 ~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~-~~~G~l~Dr~g 307 (432)
T PRK10406 233 GSLKG----LWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQ-PLIGALSDKIG 307 (432)
T ss_pred ccHHH----HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence 12333 2345555554444433 355667788899999988889998888888888888888887 67799999999
Q ss_pred hhHHHHHHHHHHH
Q 018388 312 EAKLLSLGLFAAC 324 (357)
Q Consensus 312 ~~~~~~~~~~~~~ 324 (357)
||+.+..+..+..
T Consensus 308 rr~~~~~~~~~~~ 320 (432)
T PRK10406 308 RRTSMLCFGSLAA 320 (432)
T ss_pred chHHHHHHHHHHH
Confidence 9988776655443
No 34
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=2e-28 Score=219.38 Aligned_cols=328 Identities=16% Similarity=0.129 Sum_probs=220.5
Q ss_pred hHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHH
Q 018388 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~ 90 (357)
.......+...++.....+..|.+.+ +++.+..+.|++.+.+.++..++.++.|+++||+|||+.+..+.++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 20 ILSFLIMLMDGYDLAAMGFAAPAISA--------EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHhh--------ccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 33444555566666667777777764 3455667789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh---
Q 018388 91 SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--- 167 (357)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l--- 167 (357)
..++.++..++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++......+|..++|.+++.+
T Consensus 92 ~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 167 (398)
T TIGR00895 92 FSVFTLLCALATN---VTQLLILRFLAGL-GLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV 167 (398)
T ss_pred HHHHHHHHHHccc---hHHHHHHHHHHhc-ccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc
Confidence 9999999999888 8888999999999 76777789999999999999999999999999999999999988775
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCc--ccccccccccccCCCCCCCCccccccchhHHHHHHhhhc
Q 018388 168 -STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTR--PIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 244 (357)
Q Consensus 168 -~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (357)
+|++.|++.+++..+..++....+||+++...++++.. +..+...++...+.++ ..+++.++.+..++..+.+++
T Consensus 168 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 245 (398)
T TIGR00895 168 FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQS--ALPEQKATQGTKRSVFKALFQ 245 (398)
T ss_pred ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccc--cccccccccchhhHHHHHHhc
Confidence 89999998876666666666677788754322211100 0000000000000000 000000111112222222332
Q ss_pred c---cchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHH
Q 018388 245 S---VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (357)
Q Consensus 245 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (357)
+ +......+..++..........+.|.+.+ .+|.++.+.+.......++..++. ++.+++.||+++|+.......
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~ 323 (398)
T TIGR00895 246 GKTARITVLLWLLYFMLLVGVYFLTNWLPKLMV-ELGFSLSLAATGGALFNFGGVIGS-IIFGWLADRLGPRVTALLLLL 323 (398)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcchHHHHHHHHH
Confidence 2 23333444455555666667788885554 469999999999999999999988 888999999999855444443
Q ss_pred HHHHHHHHHHhcCcchHHHH-HHHHHHhhhcccc
Q 018388 322 AACINMFICSISWSAWVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 322 ~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p 354 (357)
.......+.....+.+..+. ..+.+++.+...|
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 357 (398)
T TIGR00895 324 GAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQS 357 (398)
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 33333333332334433333 4455555554443
No 35
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=9.5e-28 Score=214.72 Aligned_cols=269 Identities=15% Similarity=0.103 Sum_probs=210.2
Q ss_pred CCccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCc
Q 018388 1 MGMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR 80 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Gr 80 (357)
|+.++.+|.+.......++..+......|.+|.+.+ +++.+..+.|++.+.+.++..++.++.|+++||+||
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~--------~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~gr 72 (394)
T PRK11652 1 MKRQRNVNLLFMLVLLVAVGQMAQTIYVPAIADMAR--------DLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGR 72 (394)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCC
Confidence 444455666666677777777888888899998875 446667788999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhh
Q 018388 81 KAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (357)
Q Consensus 81 k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 160 (357)
|+.+..+.....++...+.++++ ++.+++.|++.|+ +.+...+....+..|..++++|+++++..+.+..+|..+|
T Consensus 73 r~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 148 (394)
T PRK11652 73 RPVILVGMSIFILGTLVALFAHS---LTVLIAASAIQGL-GTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLA 148 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHh-hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888 8889999999999 6666667888889999999999999999999999999999
Q ss_pred HhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHH
Q 018388 161 TLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (357)
Q Consensus 161 ~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (357)
|.+++.+ +||+.|++.++...+..+...+..||+++.++++ + +.+
T Consensus 149 ~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~---~~~ 197 (394)
T PRK11652 149 PLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADARR----------------------------T---RVL 197 (394)
T ss_pred HHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccch----------------------------h---HHH
Confidence 9888764 8999999987776665555556677754322110 0 112
Q ss_pred HHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchh
Q 018388 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA 313 (357)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (357)
+..+...++|.++...+..+.............+.+.++.+|.++.+.+.......++..+++ .+.+++.||.+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~-~~~~~l~~~~~~~ 273 (394)
T PRK11652 198 ASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGA-WFAGRPNKRFSTL 273 (394)
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 223334557777766665555555556666777888888889999998988888877777777 7888999988743
No 36
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=6.9e-28 Score=220.61 Aligned_cols=311 Identities=13% Similarity=0.070 Sum_probs=233.5
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++.++.+.+..++..++.....+.+|.+.++ ++.+..+.|++.+.+.++..++.+++|+++||+|||++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~ 80 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQS--------LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFT 80 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH--------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 4467788888899999999999999999864 45566777999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
+.++..++.+++.++++ ++.+++.|+++|+ +.+...+...+++.|.+|+++|+++.+......++|..+||.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~---~~~l~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~ 156 (471)
T PRK10504 81 AIVLFTLGSLFCALSGT---LNELLLARVLQGV-GGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGL 156 (471)
T ss_pred HHHHHHHHHHHHHHhCC---HHHHHHHHHHHHh-hhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999999988888888 8888999999999 7777778999999999999999999999999999999999998887
Q ss_pred h----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCccccccc---------ccccccCCCCCCC---------
Q 018388 167 L----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEE---------TEGVNQNESNSPV--------- 224 (357)
Q Consensus 167 l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~--------- 224 (357)
+ +||+.|++......+..+......|+.+..+ ++.|..+..... .++.+........
T Consensus 157 l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (471)
T PRK10504 157 LVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQT-RRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGV 235 (471)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccC-CCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHH
Confidence 5 8999999988776666666555555543322 222322111000 0000000000000
Q ss_pred ------CccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHH
Q 018388 225 ------KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTIS 298 (357)
Q Consensus 225 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 298 (357)
..++.+..++..+ .+ +++||.+....+..++..........+.|.|.++.+|.++.+.+.......+...++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~-l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 313 (471)
T PRK10504 236 VALLLYLLHARNNNRALFS-LK-LFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGM 313 (471)
T ss_pred HHHHHHHHHHhcCCCCccC-HH-HhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 0000000011111 11 456888888888888888877777888999999878999999998888888777777
Q ss_pred HHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhc
Q 018388 299 QLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 333 (357)
Q Consensus 299 ~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 333 (357)
. .+.+++.||+++|+.+..+..+..+...++.+.
T Consensus 314 ~-~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
T PRK10504 314 K-RIVVQVVNRFGYRRVLVATTLGLALVSLLFMLV 347 (471)
T ss_pred H-HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhc
Confidence 7 778999999999999998888777776655553
No 37
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=4.7e-28 Score=215.36 Aligned_cols=270 Identities=14% Similarity=0.102 Sum_probs=206.6
Q ss_pred HHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccc
Q 018388 24 TMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRS 103 (357)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~ 103 (357)
.....+..|.+.+ +++++..+.|++.+++.++..+++++.|+++||+|||+++..+.++..++.++++++++
T Consensus 19 ~~~~~~~~~~~~~--------~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~ 90 (377)
T TIGR00890 19 VYTWTLLAPPLGR--------YFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADS 90 (377)
T ss_pred HhhhhhHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHH
Confidence 4445667777755 45667788899999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHH
Q 018388 104 ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIV 179 (357)
Q Consensus 104 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~ 179 (357)
++.+++.|++.|+ +.+...+.....+.|+.| |+|+++.+......++|..+++.+.+.+ +||+.|++.+++
T Consensus 91 ---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~ 165 (377)
T TIGR00890 91 ---LAALYLTYGLASA-GVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGII 165 (377)
T ss_pred ---HHHHHHHHHHHhH-HHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 8899999999999 667666777888888887 6799999999999999987655444432 799999999888
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHH
Q 018388 180 SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 259 (357)
Q Consensus 180 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (357)
.++..+..++.+||++++++++++ +..++..+.+ ...+++.++...+..+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 218 (377)
T TIGR00890 166 FLLVIVLGAFLIGYPPGQLIKTNI-----------------------EVSVKDYTVW----EMLRTPQFWVLYLSFFLNA 218 (377)
T ss_pred HHHHHHHHHHheecCchhccccCc-----------------------ccchhhhhHH----HHHcCccHHHHHHHHHHHh
Confidence 777766666666654432211100 0000001111 2345777777666666666
Q ss_pred HhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCc
Q 018388 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS 335 (357)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 335 (357)
........+.+.|.++ +|.++.+.+...+...+...+++ ++.+++.||++||+.+..+.....++.+.+.+.++
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
T TIGR00890 219 VSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGR-PFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPM 292 (377)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHccc
Confidence 5655566677777766 58888888898999999998988 88899999999999998888888888777666553
No 38
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=2.8e-28 Score=217.46 Aligned_cols=306 Identities=15% Similarity=0.174 Sum_probs=232.2
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
+|.++.+.+..++...+.+...|.+|.+.++ +++.+..+.|++.+.+.++..+++++.|+++||+|||++++.
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~-------~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~ 78 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSR-------QYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLL 78 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHH
Confidence 5567788889999999999999999999865 456777888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
+.+...++.+...++++ ++.+++.|.+.|. +.+...+...++..|..|+|+|++++++.....++|..+||.+++.
T Consensus 79 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~ 154 (395)
T PRK10054 79 AITAFASGFIAIPLVNN---VTLVVLFFALINC-AYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTL 154 (395)
T ss_pred HHHHHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988889888 7777888888887 5556667889999999999999999999999999999999999988
Q ss_pred h---hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhh
Q 018388 167 L---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (357)
Q Consensus 167 l---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (357)
+ +|+.+|++.+++.++..+...+.+||++++++++ + ++ . .+. +...
T Consensus 155 l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~-----------------------~----~~--~-~~~-~~~~ 203 (395)
T PRK10054 155 LVMQSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATE-----------------------T----GS--V-WSP-SVLL 203 (395)
T ss_pred HHHhccCcHHHHHHHHHHHHHHHHHHHHhccccccccc-----------------------h----hh--h-hhh-hhhc
Confidence 6 7999999888776666555555566554322110 0 00 0 111 2244
Q ss_pred cccchHHHHHHHHHHHHhhhhhhHHHHHhhhhh--cccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHH
Q 018388 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (357)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (357)
++|+++...+..++..........+.+.|..+. .+.+....+.+...........+ ...+++.||.++|+.+..+..
T Consensus 204 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~l~~~~~ 282 (395)
T PRK10054 204 QDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQ-YSVGRRLNAANIRPLMTAGTL 282 (395)
T ss_pred cCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeeh-hHHHHHHccCCchhHHHHHHH
Confidence 577877777777776666666666777776433 24555566777777776666666 677899999999999988888
Q ss_pred HHHHHHHHHHhcC-cchHHHH-HHHHHHhhhccccc
Q 018388 322 AACINMFICSISW-SAWVPYA-TTAFSVLVVFATPS 355 (357)
Q Consensus 322 ~~~i~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~p~ 355 (357)
+..++...+.+.. +.+.... ..++++|.+...|+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~ 318 (395)
T PRK10054 283 CFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPG 318 (395)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 8888877666543 3333333 55667776655543
No 39
>PRK09952 shikimate transporter; Provisional
Probab=99.97 E-value=1.4e-27 Score=215.90 Aligned_cols=292 Identities=13% Similarity=0.082 Sum_probs=200.4
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++.+....+..+++.++......+.|.+..+...++.++. ..........++..++..+++++.|+++||+|||+++..
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~ 99 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLML 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHH
Confidence 4455666778889999998888777766554221122221 111111223355667788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhH-----HHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhH
Q 018388 87 PLTLSIIPLAILAYRRSISF-----FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (357)
+.++.+++++++++++++.. .+.++++|+++|+ +.|...+....++.|+.|+|+|++..+..+.+..+|..+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~-~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~ 178 (438)
T PRK09952 100 TVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGF-AVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLST 178 (438)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh-hhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999322 1158889999999 77877788999999999999999999999999999988886
Q ss_pred hhhH------------HhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCcccc
Q 018388 162 LAAR------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVC 229 (357)
Q Consensus 162 ~~~~------------~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (357)
.+.. ..+||++|++.+++.++ .+......||+++..+++.+ .++ .
T Consensus 179 ~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~-~~~l~~~~~es~~~~~~~~~---------------~~~------~- 235 (438)
T PRK09952 179 GLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI-ALWVRNGMEESAEFEQQQHE---------------QAA------A- 235 (438)
T ss_pred HHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH-HHHHHHhCCCChhHHHHHhh---------------ccc------c-
Confidence 5543 24899999988776443 23333445665532211100 000 0
Q ss_pred ccchhHHHHHHhhhcccchHHHH-HHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018388 230 KKIPSIRDLICLLRSSVTLSQAA-VVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP 308 (357)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (357)
+++.+.. +.++++++.+... ...++.....+...++.|.|.++.+|.+...........++...++. ++.|++.|
T Consensus 236 ~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~-~~~g~l~D 311 (438)
T PRK09952 236 KKRIPVI---EALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTI-PCFAWLAD 311 (438)
T ss_pred cccCCHH---HHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 0001111 1133455444433 34445555666778899999988889888765555556666666766 78899999
Q ss_pred ccchhHHHHHHHHHHHHHH
Q 018388 309 ILGEAKLLSLGLFAACINM 327 (357)
Q Consensus 309 ~~~~~~~~~~~~~~~~i~~ 327 (357)
|++||+.+..+.++..++.
T Consensus 312 r~grr~~~~~~~~~~~~~~ 330 (438)
T PRK09952 312 RFGRRRVYITGALIGTLSA 330 (438)
T ss_pred HhCchHHHHHHHHHHHHHH
Confidence 9999998887766655543
No 40
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.97 E-value=2.5e-27 Score=212.31 Aligned_cols=272 Identities=11% Similarity=0.111 Sum_probs=205.1
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhh
Q 018388 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (357)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~ 85 (357)
++|.+....++.++...+.....+.+|.+.+| .+.+..+.|++.+.+.++..+++++.|+++||+|||+++.
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--------~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~ 82 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA--------LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMM 82 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHHHH--------hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 46788889999999999988888888888753 3556678899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH---Hc-cchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHH-Hhh
Q 018388 86 LPLTLSIIPLAILA---YR-RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASF-VCG 160 (357)
Q Consensus 86 ~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g 160 (357)
.+..+..++.+++. .. ++ ++.+++.|+++|+ +.+...+...+.+.|..|+|+|++++|+.+...++|. .+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~i~G~-g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g 158 (402)
T TIGR00897 83 IGLLLWCVGHAAFIVFGLGHAN---YPLILLFYGIRGL-GYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFG 158 (402)
T ss_pred HHHHHHHHHHHHHHHHhccCcc---HHHHHHHHHHHHc-chHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888876553 22 45 7778899999999 6566667778888999999999999999999999996 578
Q ss_pred HhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHH
Q 018388 161 TLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (357)
Q Consensus 161 ~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (357)
|.+++.+ +|+..++.......+..++..+..+|.+++++++ + + ++ ..+.+
T Consensus 159 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~----~---~~-~~~~~ 212 (402)
T TIGR00897 159 SYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQ------------------T----R---EK-FSELG 212 (402)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCccccc------------------C----C---cc-hhhHH
Confidence 8887763 6655555443333333333334444432211110 0 0 00 01112
Q ss_pred HHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHH
Q 018388 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (357)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (357)
+..+.++++|+++...+..++.........++.|.|.++ +|++..+.+.......++..++. +..+++.||+++|+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~~ 290 (402)
T TIGR00897 213 KAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFN-VIFGIVGDKLGWMNTV 290 (402)
T ss_pred HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHhhcchhHH
Confidence 223345668888888777777777788888999999977 69999998888888888889988 8889999999988765
Q ss_pred H
Q 018388 317 S 317 (357)
Q Consensus 317 ~ 317 (357)
.
T Consensus 291 ~ 291 (402)
T TIGR00897 291 R 291 (402)
T ss_pred H
Confidence 3
No 41
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.97 E-value=8e-28 Score=215.62 Aligned_cols=301 Identities=11% Similarity=0.101 Sum_probs=216.7
Q ss_pred chhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhh
Q 018388 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (357)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l 84 (357)
|+++++..+.+..++..++.++..|.+|.+.++ +++.+..+.|++.+++.++..+++++.|+++||+|||+++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~-------~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l 84 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHD-------QLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV 84 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH
Confidence 457788899999999999999999999998765 4566677889999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHcc---ch--hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHh
Q 018388 85 TLPLTLSIIPLAILAYRR---SI--SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC 159 (357)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 159 (357)
..+.++..++.+.+.++. +. ..++.+++.|+++|+ +.+...+...+++.|+.|+|+|++++++.+....+|..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 163 (399)
T PRK05122 85 VFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGI-GESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAI 163 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHh-hHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHH
Confidence 999998887766655432 11 125678999999999 777777888899999999999999999999999999999
Q ss_pred hHhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhH
Q 018388 160 GTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI 235 (357)
Q Consensus 160 g~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (357)
||.+++.+ +|++.+++.+++..+..+. ....|+++ +++ +++.+.
T Consensus 164 g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~----------------------------~~~~~~ 211 (399)
T PRK05122 164 GAPLGVLLYHWGGLAGLGLLIMLLALLGLLL-ARPRPAVP---PVK----------------------------GERLPF 211 (399)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHH-HhcCCCCC---CCC----------------------------ccchhH
Confidence 99888765 7898887766554332221 11112111 100 000011
Q ss_pred HHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHH
Q 018388 236 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (357)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (357)
++..+ +.+.......+..........++|.|.++. |++ +.+.......++..+++ +..+++.||+++|+.
T Consensus 212 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~ 281 (399)
T PRK05122 212 RRVLG------RVWPYGMGLALASIGFGTIATFITLYYAAR-GWD--GAALALTLFGVAFVGAR-LLFGNLINRLGGLRV 281 (399)
T ss_pred HHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccc--cchHHHHHHHHHHHHHH-HHHHHHHHHhccHHH
Confidence 22111 111122223333445556677888888765 663 34666677777777877 788999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCcchHHHH-HHHHHHhhhccccc
Q 018388 316 LSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPS 355 (357)
Q Consensus 316 ~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~ 355 (357)
+..+..+..++..++.+.++.+..+. ..+.+++.+...|.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~ 322 (399)
T PRK05122 282 AIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPA 322 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHH
Confidence 88888888888777777666554443 34556666655543
No 42
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=1.9e-27 Score=216.89 Aligned_cols=270 Identities=12% Similarity=0.080 Sum_probs=196.8
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
+.+...+...+....+.....|.+|.+.+ +++++..+.|++.+.+.+++.++.++.|+++||+|||+++..+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~ 107 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAAPLLPIIRD--------NLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFL 107 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 34455566666777777777788887765 4456667789989999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH-
Q 018388 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (357)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~- 166 (357)
.++.+++.++.+++++ ++.+++.|++.|+ +.+.. +....+++|++|+++|++++++......+|..+++.+...
T Consensus 108 ~~~~~~~~~~~~~~~s---~~~l~~~r~l~G~-~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i 182 (476)
T PLN00028 108 LMLTAPAVFCMSLVSS---ATGFIAVRFFIGF-SLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLV 182 (476)
T ss_pred HHHHHHHHHHHHHhcC---HHHHHHHHHHHHH-HHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 8888899999998 54544 3466788999999999999999887666666655433321
Q ss_pred ------------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchh
Q 018388 167 ------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPS 234 (357)
Q Consensus 167 ------------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (357)
.+||+.|++.+++.++..+..+++.++.|+. +.+ +.+++. + .++.+
T Consensus 183 ~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~-~~~------------~~~~~~-----~----~~~~~ 240 (476)
T PLN00028 183 FPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDG-NYR------------ELKKSG-----T----MPKDS 240 (476)
T ss_pred HHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCC-chh------------hHHhcC-----c----ccccc
Confidence 3799999999888776665555443332221 100 000000 0 00001
Q ss_pred HHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchh
Q 018388 235 IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA 313 (357)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (357)
..+.++...++++.+...+..+..........+++|.|+.+.+|++..+++.+.+...++..+++ ++.|+++||+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~~~r 318 (476)
T PLN00028 241 FSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFAR-PAGGYLSDVAARR 318 (476)
T ss_pred HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHh
Confidence 11222223456777776666665555556677889999988889999999999999999999998 8999999999765
No 43
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1.1e-27 Score=202.83 Aligned_cols=287 Identities=14% Similarity=0.101 Sum_probs=241.1
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhh
Q 018388 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (357)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~ 85 (357)
.+|+++.-.....+.+....+..|+.+.+. +++++|+.|.+++.++..+...+..++.|.+.||+|.|++..
T Consensus 12 ~~~~L~~S~~af~v~F~VW~l~s~l~~~i~--------~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~ 83 (417)
T COG2223 12 ARRNLWLSTLAFDVGFMVWTLFSPLGVFIK--------SDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTI 83 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhc--------cccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHH
Confidence 356777777777777777777777777763 478899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHH----HhhH
Q 018388 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASF----VCGT 161 (357)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~----~~g~ 161 (357)
++.++..+.++..+++.+++.++++++.+++.|+ +++.+ +....++++++|+|++|.++|+.. ..++|. .++|
T Consensus 84 ~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~-~GasF-av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P 160 (417)
T COG2223 84 LSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGL-AGASF-AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAP 160 (417)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhc-cccee-hcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHH
Confidence 9999999999999999876667899999999999 54554 789999999999999999999998 666664 5667
Q ss_pred hhhHHhh---hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHH
Q 018388 162 LAARFLS---TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL 238 (357)
Q Consensus 162 ~~~~~l~---~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (357)
.+....+ |+....+..+..++..+..++...|.++.++..+ +.. + +.
T Consensus 161 ~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~---------------------------~~~-~--~~ 210 (417)
T COG2223 161 LVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVK---------------------------PQL-P--AQ 210 (417)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcccc---------------------------ccc-h--hH
Confidence 7777777 9998888888877778888888887766433210 000 1 22
Q ss_pred HHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHH
Q 018388 239 ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSL 318 (357)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (357)
.+..+++++.|.+.+.++.....+.++..++|.|++++||.++.++|.........+.+.+ .++|+++||+|.++++..
T Consensus 211 ~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~R-p~GG~LsDR~Gg~rv~~~ 289 (417)
T COG2223 211 LKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALAR-PLGGWLSDRIGGRRVTLA 289 (417)
T ss_pred HHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHH-hccchhhhhccchhHHHH
Confidence 3346679999999999999999999999999999999999999999999999999999999 899999999999999988
Q ss_pred HHHHHHHHHHHHHhcC
Q 018388 319 GLFAACINMFICSISW 334 (357)
Q Consensus 319 ~~~~~~i~~~~~~~~~ 334 (357)
.+..++++.....+..
T Consensus 290 ~f~~~~~~~~~l~~~~ 305 (417)
T COG2223 290 VFVGMALAAALLSLFL 305 (417)
T ss_pred HHHHHHHHHHHHHccc
Confidence 8888888877766643
No 44
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.97 E-value=1.1e-27 Score=215.75 Aligned_cols=304 Identities=14% Similarity=0.110 Sum_probs=227.7
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
+|.+..+....++..++..+..+.+|.+.++. +.+..+.|++.+.+.++..+++++.|+++||+|||+++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~ 87 (417)
T PRK10489 16 HPAFRAVFIARFISIFGLGLLGVAVPVQIQMM--------TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILL 87 (417)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEe
Confidence 45667777888899999999999999998753 3355678999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHH-----ccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhH
Q 018388 87 PLTLSIIPLAILAY-----RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (357)
Q Consensus 87 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (357)
+.++.+++...... .++ ++.+++.|+++|+ +.+...+...+++.|..|+|+|+++.++.....++|..+||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 163 (417)
T PRK10489 88 ARGTCGLGFIGLALNAFLPEPS---LLAIYLLGLWDGF-FGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISP 163 (417)
T ss_pred hHHHHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHH-HHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHH
Confidence 88877776655442 345 7788899999999 66666788899999999999999999999999999999999
Q ss_pred hhhHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHH
Q 018388 162 LAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (357)
Q Consensus 162 ~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (357)
.+++.+ +|++.|++.++..++..++ .+.+||++++++++ ++..++.++
T Consensus 164 ~l~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~---------------------------~~~~~~~~~ 215 (417)
T PRK10489 164 ALGGLLIAAGGVAWNYGLAAAGTFITLLP-LLRLPALPPPPQPR---------------------------EHPLRSLLA 215 (417)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhCCCCCCCCccc---------------------------ccchHHHHH
Confidence 998875 7899998887765554443 44566653321110 000112223
Q ss_pred HHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHH
Q 018388 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (357)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (357)
..+..+++|.++...+..++... ......++|.|.++.+|.++.+.+.+.+..+++..++. ++.+++.||.++++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~-~~~~~l~~~~~~~~~l~ 293 (417)
T PRK10489 216 GFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGA-LTSGWLAHSARPGLLML 293 (417)
T ss_pred HHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHH-HHHHHhhhccCcchHHH
Confidence 33445567776665555544333 35667889999999789999999999999999988888 78899999987777888
Q ss_pred HHHHHHHHHHHHHHhcCcchHHHH-HHHHHHhhhcc
Q 018388 318 LGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFA 352 (357)
Q Consensus 318 ~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 352 (357)
.+.....++.+++.+.++.+.... ..+++++.+..
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 329 (417)
T PRK10489 294 LSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAIS 329 (417)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 888777777777766665443333 34445555443
No 45
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=3.7e-28 Score=216.16 Aligned_cols=272 Identities=14% Similarity=0.075 Sum_probs=208.6
Q ss_pred HHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHH
Q 018388 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLA 96 (357)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~ 96 (357)
.+..........+..|.+.+ +++.+..+.|++.+++.++..++.++.|+++||+|||+.+..+.++..++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~--------~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 75 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVE--------EIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNL 75 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHH--------HhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHH
Confidence 44556667777777887655 3455667789999999999999999999999999999999999999999999
Q ss_pred HHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhH-hhhHH----hhhHH
Q 018388 97 ILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT-LAARF----LSTTS 171 (357)
Q Consensus 97 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~----l~~~~ 171 (357)
++.++++ ++.+++.|++.|+ +.+...+...+++.|+.|+|+|++++++.+....+|..++| .+++. .+||+
T Consensus 76 ~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 151 (379)
T TIGR00881 76 FFGFSTS---LWVMAALWALNGI-FQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHW 151 (379)
T ss_pred HHHHhhh---HHHHHHHHHHHHh-hccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchh
Confidence 9999998 8899999999999 66777789999999999999999999999999999999998 45544 38999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHH
Q 018388 172 AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQA 251 (357)
Q Consensus 172 ~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (357)
.|++.+++.++..+..++..||++++++.+.+.+. +.++.+.. .+..+++..+.+...+.+.++|.++..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (379)
T TIGR00881 152 VFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEM---------PNEEPDGD-AEKKEEELTKKQIFLQYVLLNKVLWYI 221 (379)
T ss_pred HHHHHHHHHHHHHHHHheeeCCCccccccCccccC---------cccccccc-cccccccccchHHHHHHHHhcchHHHH
Confidence 99988887776666666667776543322111000 00000000 000011111222223345568888888
Q ss_pred HHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 018388 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG 311 (357)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 311 (357)
.+..++..........+.|.|+++.+|+++.+.+.......++..++. ++.+++.||..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~~ 280 (379)
T TIGR00881 222 SLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGT-LLAGWLSDKLF 280 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhH-HHHHHHHHHHc
Confidence 888888888888889999999998889999999999999999999988 88899999863
No 46
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=1.6e-27 Score=212.14 Aligned_cols=265 Identities=14% Similarity=0.160 Sum_probs=211.8
Q ss_pred HHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHH
Q 018388 21 GFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY 100 (357)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~ 100 (357)
.++..+..|.+|.+.++ ++.+..+.|++.+++.++..++.++.|+++||+|||+.+..+.++..++...+.+
T Consensus 4 ~~~~~~~~p~~~~~~~~--------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 4 PLAIDMYLPALPVIAAD--------FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL 75 (377)
T ss_pred chHHHHHhccHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH
Confidence 35667788999999864 4566678899999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHHH
Q 018388 101 RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAA 176 (357)
Q Consensus 101 ~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~ 176 (357)
+++ ++.+++.|+++|+ +.+...+...+++.|++|+|+|++++++.+....+|..++|.+++.+ +||+.|++.
T Consensus 76 ~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 151 (377)
T PRK11102 76 AQT---IDQLIYMRFLHGL-AAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVL 151 (377)
T ss_pred Hcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHH
Confidence 998 8888999999999 66777788999999999999999999999999999999999888764 899999988
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHH
Q 018388 177 TIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAF 256 (357)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (357)
+.+..+..++..+..||++++++++ +.+.++..++.. ...+++..+...+..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 204 (377)
T PRK11102 152 ALAAILAAALVFFFIPETLPKERRQ--------------------------PFHLRTTIRNFA-SLFRHKRVLGYMLASG 204 (377)
T ss_pred HHHHHHHHHHHHHhCCccCcccccC--------------------------CCChHHHHHHHH-HHHcChHHHHHHHHHH
Confidence 8887776666666677754322111 000011122222 2445677666666666
Q ss_pred HHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHH
Q 018388 257 FSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (357)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i 325 (357)
+..........+.|.+..+.+|+++.+.+.+.....+...+++ ++.+++.||+++|+.+..+.....+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~~~~ 272 (377)
T PRK11102 205 FSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMT-IINSRFVRRVGALNMLRFGLWIQFI 272 (377)
T ss_pred HHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 6666666667777888888789999999999999999988888 8889999999999988877765443
No 47
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=4.8e-27 Score=212.46 Aligned_cols=284 Identities=14% Similarity=0.062 Sum_probs=194.9
Q ss_pred chhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHH-HHHHHHHHHHHHHHHhhhhhhhhcCcchh
Q 018388 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSG-FQQAIIGLGTLVMMPVIGNLSDQYGRKAM 83 (357)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g-~~~~~~~~~~~i~~~~~G~l~dr~Grk~~ 83 (357)
.|++.....+++.+++.++...+.+..|.+.++. +.++.+.+ ....+ .......+...+++++.|+++||+|||+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~-~~~~~~~~--~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~ 88 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLFGFYATAIAKTF-FPAGNEFA--SLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKG 88 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCCchH--HHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHH
Confidence 4556677889999999999999999999988874 22222211 11101 12223344456788999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHccchhHH-----HHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHH
Q 018388 84 LTLPLTLSIIPLAILAYRRSISFF-----YAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFV 158 (357)
Q Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 158 (357)
++.+.++..+++.++++++++... ..++++|+++|+ +.+...+....+++|++|+|+|++++++.+....+|..
T Consensus 89 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~-~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~ 167 (434)
T PRK15075 89 LIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGF-SAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVV 167 (434)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhc-cccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHH
Confidence 999999999999999999983211 146899999999 66777788899999999999999999999888888777
Q ss_pred hhHhhhHH------------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCc
Q 018388 159 CGTLAARF------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKI 226 (357)
Q Consensus 159 ~g~~~~~~------------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (357)
+|+.+++. .+||++|++..... ..........||+++..+++ ++
T Consensus 168 ~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~-~~~~~~~~~~~e~~~~~~~~------------------~~----- 223 (434)
T PRK15075 168 FAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV-PFIFLIRRSLEETEEFLARK------------------HR----- 223 (434)
T ss_pred HHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHhh------------------hc-----
Confidence 77666553 48999998764432 21111111222221100000 00
Q ss_pred cccccchhHHHHHHhhhcccchHHH-HHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhh
Q 018388 227 PVCKKIPSIRDLICLLRSSVTLSQA-AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPL 305 (357)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (357)
. +.++.++..+++++.+.. ....+...........+.|.|+++.+|++..+.+.......++..++. ++.|+
T Consensus 224 --~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~ 296 (434)
T PRK15075 224 --P----SMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWL-PIGGA 296 (434)
T ss_pred --c----ccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 0 001112122233333322 333344455566778899999998889999888888888888888888 88899
Q ss_pred hhhccchhHHHHHHHHHH
Q 018388 306 LAPILGEAKLLSLGLFAA 323 (357)
Q Consensus 306 l~~~~~~~~~~~~~~~~~ 323 (357)
+.||++||+....+....
T Consensus 297 l~Dr~g~r~~~~~~~~~~ 314 (434)
T PRK15075 297 LSDRIGRRPVLIAFTVLA 314 (434)
T ss_pred HHHHhcchHHHHHHHHHH
Confidence 999999999877665444
No 48
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.96 E-value=3.8e-28 Score=222.94 Aligned_cols=312 Identities=14% Similarity=0.120 Sum_probs=211.9
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
......++.+...++...+.+..|.+.++...+..++.+.+..+.|++.+++.++..++++++|+++||+|||++++.+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~ 92 (479)
T PRK10077 13 ITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAA 92 (479)
T ss_pred HHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 34455666777888888888888888777655555667888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHc---------cchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHh
Q 018388 89 TLSIIPLAILAYR---------RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC 159 (357)
Q Consensus 89 ~~~~~~~~~~~~~---------~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 159 (357)
++..++.+.++++ ++...++.+++.|+++|+ +.|...+...++++|++|+|+|+++++..+....+|..+
T Consensus 93 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~-~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~ 171 (479)
T PRK10077 93 VLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGI-GVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLV 171 (479)
T ss_pred HHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhh-hHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHH
Confidence 9998888877763 233335678899999999 778888999999999999999999999999999999998
Q ss_pred hHhhhHH------------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCcc
Q 018388 160 GTLAARF------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIP 227 (357)
Q Consensus 160 g~~~~~~------------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (357)
++.+++. .+||+.|++.++..++..+ ..+++||++++...+.+.++.....++ .....+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~~s~~~l~~~~~~~~~~~~~~~----~~~~~~~~-- 244 (479)
T PRK10077 172 VYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM-LLYFVPETPRYLMSRGKQEQAEGILRK----IMGNTLAT-- 244 (479)
T ss_pred HHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH-HHHcCCCCcHHHHHcCCHHHHHHHHHH----HcCChhHH--
Confidence 8876543 3799999998777666544 456789887532111110000000000 00000000
Q ss_pred ccccchhHHHHHHh-hhcccchHH-----HHH----HHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHH
Q 018388 228 VCKKIPSIRDLICL-LRSSVTLSQ-----AAV----VAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTI 297 (357)
Q Consensus 228 ~~~~~~~~~~~~~~-~~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 297 (357)
...++.++..+. ..+.+.... ... ..+...........+.|.+.++ .|.+...........++...+
T Consensus 245 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i 321 (479)
T PRK10077 245 --QALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLT 321 (479)
T ss_pred --HHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHH
Confidence 000011110000 000011100 010 0111111122334455666665 488887767777777778888
Q ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 018388 298 SQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI 332 (357)
Q Consensus 298 ~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 332 (357)
+. ++.+++.||++||+.+..+..+.+++.+.+..
T Consensus 322 ~~-~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~ 355 (479)
T PRK10077 322 FT-VLAIMTVDKFGRKPLQIIGALGMAIGMFSLGT 355 (479)
T ss_pred HH-HHHHHHHHHhcChHHHHHhHHHHHHHHHHHHH
Confidence 87 88899999999999999999988888766644
No 49
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=3.3e-27 Score=211.07 Aligned_cols=300 Identities=14% Similarity=0.124 Sum_probs=210.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhh
Q 018388 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (357)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~ 85 (357)
+++.++.+.+..++..++.++..|.+|.+.++ +++.+..+.|++.+.+.++..++++++|+++||+||||+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~-------~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~ 85 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHH-------DLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSAL 85 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHH-------hcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHH
Confidence 35667778888899999999999999988764 45667788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH---ccc--hhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhh
Q 018388 86 LPLTLSIIPLAILAY---RRS--ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (357)
Q Consensus 86 ~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 160 (357)
.+.+...++.+.... .++ ...++.+++.|+++|+ +.+...+...+++.|..|+|+|++++++.+.....|..+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g 164 (392)
T PRK12382 86 QGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGF-GESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAG 164 (392)
T ss_pred HHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHH
Confidence 988877665543322 111 1127888999999999 6677778888999999999999999999999999999999
Q ss_pred HhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHH
Q 018388 161 TLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (357)
Q Consensus 161 ~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (357)
|.+++.+ +||+.+.+..+..++.. ...++.++.++++ +++++.+
T Consensus 165 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----------------------------~~~~~~~ 212 (392)
T PRK12382 165 APLGLLLHSHFGFAALALTTMVLPLLAW----AFNGTVRKVPAHA----------------------------GERPSLW 212 (392)
T ss_pred HHHHHHHHhccChHHHHHHHHHHHHHHH----HHHHhccCCCCCc----------------------------ccCchHH
Confidence 9988764 78877665544432221 1122221111100 0000122
Q ss_pred HHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHH
Q 018388 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (357)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (357)
+..+.+++ +. +..++..........+.|.|+++. |++. .+......+++..+++ +..+++.||+++|+.+
T Consensus 213 ~~~~~~~~-~~-----~~~~l~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~ 282 (392)
T PRK12382 213 SVVGLIWK-PG-----LGLALQGVGFAVIGTFVSLYFASK-GWAM--AGFTLTAFGGAFVLMR-VLFGWMPDRFGGVKVA 282 (392)
T ss_pred HHHHHHHH-hH-----HHHHHHHHHHhHHHHHHHHHHHhc-CCch--hHHHHHHHHHHHHHHH-HHHHHHHHhcCCCeeh
Confidence 22222221 11 122233344555677788888775 6653 4566666677777777 7889999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCcchHHHH-HHHHHHhhhccccc
Q 018388 317 SLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPS 355 (357)
Q Consensus 317 ~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~ 355 (357)
..+..+..++.+++.+.++.+..+. ..+.+++.+...|.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 322 (392)
T PRK12382 283 IVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPA 322 (392)
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHH
Confidence 8888888888777777666554443 44556666655543
No 50
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.96 E-value=7.4e-27 Score=212.25 Aligned_cols=255 Identities=13% Similarity=0.080 Sum_probs=188.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccch-hHHHHHHHHHHHhhhcccchH
Q 018388 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI-SFFYAYYALRTLTAMVCEGSI 125 (357)
Q Consensus 47 ~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~ 125 (357)
+.+..+.|++.+.+.++..+++++.|+++||+|||++++.+.++.+++.+.+++++.. ..++.+++.|++.|+ +.+..
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi-~~g~~ 137 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGW-FQGMG 137 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHH-HHhcc
Confidence 6667788999999999999999999999999999999999999999998888876411 116778899999999 66666
Q ss_pred HHHHHHHHhhCCCccchhHHHHHHHHHHHHHH-HhhHhhhHH----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 018388 126 NCLALAYVADNISERQRASAFGILLGVLSASF-VCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD 200 (357)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~ 200 (357)
.+.....+.|++|+|+|++++++.+.+..+|. ..+|+++.. .+||+.|++.+++.++..++..+++||++++...
T Consensus 138 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (452)
T PRK11273 138 WPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGL 217 (452)
T ss_pred chHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCC
Confidence 67777888999999999999999999999886 455654322 2899999998887777666667778887654221
Q ss_pred CCCCcccccccccccccCCCCCCCCccccccchhHHHH-HHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhccc
Q 018388 201 DDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL-ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHF 279 (357)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (357)
+.+.+ . +.+.++....+ + ++..+.++. .+..++++.++...+..++..........++|.|+++..|+
T Consensus 218 ~~~~~-~--------~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~ 286 (452)
T PRK11273 218 PPIEE-Y--------KNDYPDDYNEK-H-EQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHF 286 (452)
T ss_pred CChhh-h--------hhccccccccc-c-CCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11000 0 00000000000 0 001112222 23356688888888888887777788889999999998899
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhhhhcc--chhH
Q 018388 280 NKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAK 314 (357)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~ 314 (357)
+..+.+.......++..++. ++.|++.||+ +||.
T Consensus 287 s~~~~~~~~~~~~~~~~~g~-~~~G~l~dr~~~~r~~ 322 (452)
T PRK11273 287 ALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVFRGNRG 322 (452)
T ss_pred CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccCCcc
Confidence 98888888888888888888 8899999998 4443
No 51
>PRK11043 putative transporter; Provisional
Probab=99.96 E-value=2.3e-26 Score=206.29 Aligned_cols=270 Identities=17% Similarity=0.110 Sum_probs=204.6
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
+........+..++.+++.|.+|.+.+ +++.+..+.|+..+++.++..++.+++|+++||+|||+.+..+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~--------~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 79 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQA--------DLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLS 79 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHH--------HHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHH
Confidence 344444566677778888888888765 345667788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh--
Q 018388 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-- 167 (357)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-- 167 (357)
+..++..++.++++ ++.+++.|+++|+ +.+...+...+++.|.+|++++++..+.......+|..++|.+++.+
T Consensus 80 ~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 155 (401)
T PRK11043 80 LFALGSLGMLWVES---AAQLLVLRFVQAV-GVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN 155 (401)
T ss_pred HHHHHHHHHHHhcC---HHHHHHHHHHHHh-hhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999998 8889999999999 65666677888999999999999999998888888988999888774
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcc
Q 018388 168 --STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (357)
Q Consensus 168 --~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (357)
+||+.|++.+++.++..+..+ .++|++++++++ +++ ++ .+.+.++
T Consensus 156 ~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------------------------~~~---~~-~~~~~~~ 202 (401)
T PRK11043 156 HFGWQAIFATLFAITLLLILPTL-RLKPSKKARKQS----------------------------QDA---LT-FKQLLKS 202 (401)
T ss_pred cCChHHHHHHHHHHHHHHHHHHH-HcCCCCCccccc----------------------------hHH---HH-HHHHHcC
Confidence 899999988877666555443 345433211110 001 12 2223446
Q ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHH
Q 018388 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (357)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i 325 (357)
++.+...+..............+.|.+.++ +|+++.+.+.......++..+++ +..+++.||+++|+.........++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~-~~~~~l~~r~~~~~~~~~~~~~~~~ 280 (401)
T PRK11043 203 KTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGG-YGCRAALQKWGGEQLLPWLLVLFAV 280 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 666555555555555556667788988876 59999998988877777777877 7889999999998876555544444
Q ss_pred H
Q 018388 326 N 326 (357)
Q Consensus 326 ~ 326 (357)
+
T Consensus 281 ~ 281 (401)
T PRK11043 281 S 281 (401)
T ss_pred H
Confidence 3
No 52
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.96 E-value=3.6e-27 Score=220.93 Aligned_cols=173 Identities=16% Similarity=0.141 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHH
Q 018388 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (357)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~ 91 (357)
.+.++.+...+....+.+++|.+..+ ++++..+.|++.+++.++.+++.+++|+++||+|||+.++++.++.
T Consensus 171 i~~l~~~~~g~d~~~is~ilp~i~~~--------~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 171 VLGLALMADGVEVFVVGFVLPSAEKD--------LCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34444555556666677788877653 4556677899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----
Q 018388 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL---- 167 (357)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l---- 167 (357)
+++.++++++++ ++.++++|++.|+ +.+...+...+++.|++|+++|++.+++...+..+|.++++.++..+
T Consensus 243 ~i~~ll~afa~s---~~~llv~R~l~G~-g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~ 318 (742)
T TIGR01299 243 GFFAFFSSFVQG---YGFFLFCRLLSGF-GIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHY 318 (742)
T ss_pred HHHHHHHHHHhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999998 8899999999999 66777799999999999999999999999999999999988765331
Q ss_pred -------------hhHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 018388 168 -------------STTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (357)
Q Consensus 168 -------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~ 197 (357)
+||+.+++.++..++ .++..+++||+|++
T Consensus 319 G~~~~~g~~~~~~gWR~l~~i~~lp~ll-~ll~~~~lPESPrw 360 (742)
T TIGR01299 319 GWSFQMGSAYQFHSWRVFVIVCAFPCVF-AIGALTFMPESPRF 360 (742)
T ss_pred cchhccccccccccHHHHHHHHHHHHHH-HHHHHHHcCCCHHH
Confidence 589988887766444 44556778999875
No 53
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=2.9e-27 Score=216.00 Aligned_cols=285 Identities=12% Similarity=0.058 Sum_probs=212.1
Q ss_pred hHHHHHHHHHHHHHHhhHhhHHHHHHHHh--------------cCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 018388 11 SHLFVTVFLWGFATMMVVPAITDVTMMAL--------------CPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD 76 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~d 76 (357)
..+.+...+...+........+.+.++.. +..+.+++++..+.|++.+.+.+++.+++++.|+++|
T Consensus 22 ~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d 101 (465)
T TIGR00894 22 FLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIPVGYLAG 101 (465)
T ss_pred HHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcchHHHHH
Confidence 34455555556666666556555543210 0011267889999999999999999999999999999
Q ss_pred hcCcchhhhHHHHHHHHHHHHHHHc--cchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHH
Q 018388 77 QYGRKAMLTLPLTLSIIPLAILAYR--RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLS 154 (357)
Q Consensus 77 r~Grk~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 154 (357)
|+|||+.+..+.++..++.+++.++ .+ ++.+++.|+++|+ +.+...+....++.|++|+++|++++++...+..
T Consensus 102 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~~~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 177 (465)
T TIGR00894 102 KYVFKWSIGIGMFLSSVISIVIPWAAGGG---IALVVFCRVIQGL-AQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQ 177 (465)
T ss_pred HhCcchhhHHHHHHHHHHHHHHHHHHHcC---chHHHHHHHHHHH-hcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 9999999999999998888876544 45 6778999999999 7788889999999999999999999999999999
Q ss_pred HHHHhhHhhhHHh-----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCcccc
Q 018388 155 ASFVCGTLAARFL-----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVC 229 (357)
Q Consensus 155 ~g~~~g~~~~~~l-----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (357)
+|..++|.+++.+ +||+.|++.++..++..++.+...+|+|+.+++..+.++ +..++..++ .+ .+.
T Consensus 178 ~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~------~~i~~~~~~--~~-~~~ 248 (465)
T TIGR00894 178 LGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEK------KYINSSLQG--QK-GST 248 (465)
T ss_pred HHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHH------HHHHhhccc--cc-CCC
Confidence 9999999888764 789999999888776666555556665543222111000 000000000 00 001
Q ss_pred ccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018388 230 KKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI 309 (357)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (357)
+...++++ +.+++.++...+..+..........+++|.|+++.+|.+..+.+...+...++..++. ++.|++.||
T Consensus 249 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~-~~~g~l~d~ 323 (465)
T TIGR00894 249 RQSLPIKA----IPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCS-IFAGYLADF 323 (465)
T ss_pred CCCCCHHH----HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 11123343 4568888989998888888888889999999999889999999999999999988888 888999998
Q ss_pred cchh
Q 018388 310 LGEA 313 (357)
Q Consensus 310 ~~~~ 313 (357)
.++|
T Consensus 324 ~~~~ 327 (465)
T TIGR00894 324 LKSS 327 (465)
T ss_pred HHHc
Confidence 7543
No 54
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.96 E-value=3.2e-26 Score=207.34 Aligned_cols=254 Identities=13% Similarity=0.091 Sum_probs=189.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccch-hHHHHHHHHHHHhhhcccchH
Q 018388 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI-SFFYAYYALRTLTAMVCEGSI 125 (357)
Q Consensus 47 ~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~ 125 (357)
+.+..+.|++.+++.++..++.++.|+++||+|||+.+..+.++.+++..+....++. ..++.+.+.|++.|+ +.+..
T Consensus 57 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~-~~g~~ 135 (438)
T TIGR00712 57 GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGW-FQGMG 135 (438)
T ss_pred CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHH-Hhhcc
Confidence 5666778999999999999999999999999999999999999998888877765321 116677889999998 66666
Q ss_pred HHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH-----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 018388 126 NCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD 200 (357)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~-----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~ 200 (357)
.+.....+.|++|+|+|++++++.+....+|..++|.+.+. .+||+.|++.+++.++..+..++.+||++++.+.
T Consensus 136 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~ 215 (438)
T TIGR00712 136 WPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGL 215 (438)
T ss_pred hHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCC
Confidence 67888999999999999999999999999999888766543 3899999999888777666667777876543221
Q ss_pred CCCCcccccccccccccCCCCCCCCccccccchhHHHH-HHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhccc
Q 018388 201 DDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL-ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHF 279 (357)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (357)
+.+.+. +.+..++. .++.+++. +.++. .+...+++.++...+..++.........+++|.|+++..|+
T Consensus 216 ~~~~~~-------~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~ 284 (438)
T TIGR00712 216 PPIEEY-------RNDYPDDY---NEKAEQEL-TAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHF 284 (438)
T ss_pred CCchhc-------cccccccc---cccccccc-chHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCC
Confidence 100000 00000000 00000000 11221 22356788888887777777777778889999999988899
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhhhhccchh
Q 018388 280 NKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA 313 (357)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (357)
++.+.+.......+...+++ ++.+++.||++++
T Consensus 285 s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~ 317 (438)
T TIGR00712 285 ALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVFKG 317 (438)
T ss_pred ChhhHHHHHHHHHHHHHHHH-HHHHHHHHHhccC
Confidence 99999999999988888888 8899999999643
No 55
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.96 E-value=9.7e-26 Score=199.99 Aligned_cols=272 Identities=14% Similarity=0.116 Sum_probs=209.4
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
+|+++...+..++.+....+..|+.+.+.++ +++++..+.+++.+++.++..++.++.|++.||+|.|+++..
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~-------~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~ 105 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKI-------GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVF 105 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 3677788888888888888888888877542 577888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc-----cchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHh--
Q 018388 87 PLTLSIIPLAILAYR-----RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC-- 159 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-- 159 (357)
+.++..+.+...+++ ++ ++.+++.|++.|+ + +...+.....+++++|+|+||+++|+.....++|..+
T Consensus 106 ~~ll~~i~~~~~~~a~~~~~~s---~~~lli~r~l~Gi-g-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~ 180 (462)
T PRK15034 106 STAILIIPCVWLGIAVQNPNTP---FGIFIVIALLCGF-A-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ 180 (462)
T ss_pred HHHHHHHHHHHHHHHHcccCCC---HHHHHHHHHHHHH-H-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHH
Confidence 999999999999886 67 8999999999999 5 4566889999999999999999999997666666544
Q ss_pred --hHhhhH------------------HhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCC
Q 018388 160 --GTLAAR------------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNE 219 (357)
Q Consensus 160 --g~~~~~------------------~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (357)
+|.+.+ ..+||..+++..++.++..++.++..++.++. +.
T Consensus 181 ~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~-~~------------------- 240 (462)
T PRK15034 181 LVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS-RA------------------- 240 (462)
T ss_pred HHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc-cc-------------------
Confidence 443321 22477777777777666666666655443321 11
Q ss_pred CCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHH
Q 018388 220 SNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQ 299 (357)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 299 (357)
+.++..+ ..|+|..|...+.+++....+.++..++|.|.++.+ +............+...+.+
T Consensus 241 --------------~~~~~~~-vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~r 303 (462)
T PRK15034 241 --------------SIADQLP-VLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIAR 303 (462)
T ss_pred --------------CHHHHHH-HhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHH
Confidence 2244344 445889999999999988888888889999998865 33332222334456666777
Q ss_pred HHHHhhhhhccchhHHHHHHHHHHHHHHH
Q 018388 300 LLFMPLLAPILGEAKLLSLGLFAACINMF 328 (357)
Q Consensus 300 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ 328 (357)
.++|+++||+|+++++..+.+...+...
T Consensus 304 -plgG~LADRiG~~~vl~~~~i~~~i~~~ 331 (462)
T PRK15034 304 -SVGGAISDKFGGVRVTLINFIFMAIFSA 331 (462)
T ss_pred -HhhHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 7889999999999999888877766643
No 56
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.96 E-value=8.2e-26 Score=201.88 Aligned_cols=286 Identities=15% Similarity=0.143 Sum_probs=198.6
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhh-h
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML-T 85 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l-~ 85 (357)
+......++..++..++..+..|.+|.+..+ +++.+..+.|++.+...+...+.+++.|.++||+||||.+ .
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~-------~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~ 86 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTD-------EVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIV 86 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 4556777888999999999999999999865 4566667789988776665555555555559999999875 4
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchh--HHHHHHHHHHHHHHHhhHhh
Q 018388 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRA--SAFGILLGVLSASFVCGTLA 163 (357)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~--~~~~~~~~~~~~g~~~g~~~ 163 (357)
.+.+...++..+.+++++ ++.+++.+.+.+. ..+...|...++..|+.++++|. ...+..+...++|.++||.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i 162 (393)
T PRK15011 87 FCCLLGVLACTLFAWNRN---YFVLLFVGVFLSS-FGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPL 162 (393)
T ss_pred HHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHH-HHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHH
Confidence 566666677777788888 7766655555444 23456688888888887766553 44578888999999999999
Q ss_pred hHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHH
Q 018388 164 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (357)
Q Consensus 164 ~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (357)
++.+ |||..|+..++..++..+..++.+||++++++++ + + +.+ ..+
T Consensus 163 ~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------~-------~~~---~~~--- 212 (393)
T PRK15011 163 AYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLA-T----------------G-------TLE---APR--- 212 (393)
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccc-c----------------c-------ccc---ccc---
Confidence 8765 9999999998887777666667778764332211 0 0 000 000
Q ss_pred HhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Q 018388 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (357)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (357)
++++..+......+........+..+.|.|+++.+|+++.+.+.+.....+..+++. ++.|++.||+++|+.+..+
T Consensus 213 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~-~~~G~l~dr~g~~~~~~~~ 288 (393)
T PRK15011 213 ---RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTM-LIAGYFAKRLGKRFLMRVA 288 (393)
T ss_pred ---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHHHHHH
Confidence 011222333333344444555567789999988889999888988877777776767 8889999999999987777
Q ss_pred HHHHHHHHHHHHhcCcch
Q 018388 320 LFAACINMFICSISWSAW 337 (357)
Q Consensus 320 ~~~~~i~~~~~~~~~~~~ 337 (357)
.....+.+..+...++.+
T Consensus 289 ~~~~~~~~~~~~~~~~~~ 306 (393)
T PRK15011 289 AVAGVCFYAGMLMAHSPA 306 (393)
T ss_pred HHHHHHHHHHHHHHhhHH
Confidence 665555544444444443
No 57
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=3.3e-27 Score=210.66 Aligned_cols=278 Identities=15% Similarity=0.103 Sum_probs=225.5
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhccc
Q 018388 43 LDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122 (357)
Q Consensus 43 ~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 122 (357)
+.++.++..+.|++.+.+..|+.++..+.|+++||+|-|+++..+.++.++++++...+.+.+ ++.+++.|++||+ +.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~-~~~~~~~R~lqGl-~~ 142 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG-FYLLLVLRFLQGL-GQ 142 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc-chhhHHHHHHhHH-HH
Confidence 457889999999999999999999999999999999999999999999999999999887644 4577999999999 88
Q ss_pred chHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-----hhHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 018388 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (357)
Q Consensus 123 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~ 197 (357)
|...|+...+.++|.|++||++..++...+..+|.+++-.++|++ ||+++|++.++++++..++.+++..|+|.+
T Consensus 143 g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 143 GVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred hHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 999999999999999999999999999999999999988888775 899999999999888877766667776655
Q ss_pred CCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhc
Q 018388 198 DDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF 277 (357)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (357)
.+.-.+. |.+..++.....+...+...|+++ +.+++.+|...+..+...........++|.|+++.+
T Consensus 223 h~~is~~---------El~~I~~~k~~~~~~~~~~vP~~~----i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL 289 (466)
T KOG2532|consen 223 HPNISEK---------ELKYIEKGKSEAHVKKKPPVPYKA----ILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVL 289 (466)
T ss_pred CCCCCHH---------HHHHHHhcccccccCCCCCCCHHH----HHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh
Confidence 3321100 000000111111111113446666 557999999999999999999999999999999999
Q ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccch---------hHHHHHHHHHHHHHHHHHHhcCcc
Q 018388 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE---------AKLLSLGLFAACINMFICSISWSA 336 (357)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~ 336 (357)
|++..+.|++.++..+...+.. +++|.++||..+ |-.-.++....++.++.+.+.++.
T Consensus 290 ~f~v~~~G~~salP~l~~~~~k-~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~ 356 (466)
T KOG2532|consen 290 GFDVRETGFLSALPFLAMAIVK-FVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDE 356 (466)
T ss_pred CCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCC
Confidence 9999999999999999999988 899999998754 233456666666667777776643
No 58
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=5.1e-26 Score=202.45 Aligned_cols=300 Identities=13% Similarity=0.001 Sum_probs=220.6
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH-
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL- 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~- 88 (357)
...+.+..+....+.++..|.+|.+.++ .+.+..+.|++.+++.+...++++++|+++||+|||+......
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~~--------~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 77 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLKG--------IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLA 77 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 3456777888888899999999999874 4667788999999999999999999999999999854332211
Q ss_pred HHHHHHH-HHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 89 TLSIIPL-AILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 89 ~~~~~~~-~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
....+.. ..+..+++ ++.+++.|.++|. ..+...|...++..|. +|+|++..+......++|.++||.+++.+
T Consensus 78 ~~~~l~~~~~~~~~~~---~~~l~~~~~l~~~-~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l 151 (382)
T TIGR00902 78 LASAIFAAAFSAGAHN---AWLLFIAIGLFAL-FFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGL 151 (382)
T ss_pred HHHHHHHHHHHHhhhh---HHHHHHHHHHHHH-HHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 23345677 8889999999998 4455568888887664 47889999999999999999999988775
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhh
Q 018388 168 ----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (357)
Q Consensus 168 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (357)
|||..|++.+.. .+..+. .+..+|++++++++. + ++.+ +.++..+ +.
T Consensus 152 ~~~~g~~~~f~~~~~~-~~~~~~-~~~~~~~~~~~~~~~------------------~-----~~~~---~~~~~~~-~l 202 (382)
T TIGR00902 152 IGMFDEQNILAILTAG-LAFMLI-GFLIKPTIPPKDAIP------------------E-----DESQ---GDSAFIA-LL 202 (382)
T ss_pred HHHcChhHHHHHHHHH-HHHHHH-HHHcCCCCCCCcccc------------------c-----cccc---cchhHHH-HH
Confidence 899998887655 222222 233343321111100 0 0000 1112222 44
Q ss_pred cccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHH
Q 018388 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (357)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (357)
|+|+++...+..++.......+.++.|.|+++ .|.++.++|.......+..++.. .+.+++.||+++|+.+..+.+..
T Consensus 203 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~-~~~~~l~~r~g~~~~l~~~~~~~ 280 (382)
T TIGR00902 203 KNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIF-AFSNKLFQNCSARDLLLISAIAC 280 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHH-HHhHHHHhhCCHHHHHHHHHHHH
Confidence 68888888888888888888999999999988 59999999999998877877777 88899999999999999999999
Q ss_pred HHHHHHHHhcCcchHHHH-HHHHHHhhhcccc
Q 018388 324 CINMFICSISWSAWVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 324 ~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p 354 (357)
.+....+.+.++.+..+. ..+-++..+...|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~ 312 (382)
T TIGR00902 281 VGRWAIIGAIEAFPLIFLLQILHCGTFAVCHL 312 (382)
T ss_pred HHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHH
Confidence 999988888877776665 4455665555444
No 59
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=5e-27 Score=215.41 Aligned_cols=312 Identities=14% Similarity=0.071 Sum_probs=207.5
Q ss_pred HHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHH
Q 018388 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPL 95 (357)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~ 95 (357)
..++..++.....+.+|....+..-....+.+.+..+.|++.+++.++..++++++|+++||+|||++++.+.++..++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~ 115 (481)
T TIGR00879 36 GGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGA 115 (481)
T ss_pred HHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHH
Confidence 33445556677777778777662211122334567788999999999999999999999999999999999999999999
Q ss_pred HHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhh---HH----hh
Q 018388 96 AILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA---RF----LS 168 (357)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~~----l~ 168 (357)
+++.+..+...++.+++.|+++|+ +.+...+...+++.|++|+++|++++++.+....+|..++|.++ .. .+
T Consensus 116 ~~~~~~~~~~~~~~~~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 194 (481)
T TIGR00879 116 ILMGLAAFALSVEMLIVGRVLLGI-GVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLG 194 (481)
T ss_pred HHHHHhccccchHHHHHHHHHHHh-hhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Confidence 888766543335688999999999 77788888999999999999999999999999999999999998 43 48
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCc-----------cccccchhHHH
Q 018388 169 TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKI-----------PVCKKIPSIRD 237 (357)
Q Consensus 169 ~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 237 (357)
||+.|++.++..++ .++..+++||+++....+++.++..+...+..+.++++....+ +.+.....+++
T Consensus 195 w~~~f~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (481)
T TIGR00879 195 WRIPLGLQLIPAGL-LFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGS 273 (481)
T ss_pred HHHHHHHHHHHHHH-HHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHH
Confidence 99999996655444 3444566788764211111110000000000000000000000 00000011122
Q ss_pred HHHhhh--cccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHH
Q 018388 238 LICLLR--SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (357)
Q Consensus 238 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (357)
.++..+ +++.++...+..+...........+.|.+.++ .|++..+.+.......++..++. ++.+++.||+++|+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~~~~~~ 351 (481)
T TIGR00879 274 LFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFT-FVAIFLVDRFGRRPL 351 (481)
T ss_pred HHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHhcchHH
Confidence 221111 12222223333333333344456666766665 59999888888888888888888 888999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 018388 316 LSLGLFAACINMFICS 331 (357)
Q Consensus 316 ~~~~~~~~~i~~~~~~ 331 (357)
+..+..+.+++.+++.
T Consensus 352 ~~~~~~~~~~~~~~~~ 367 (481)
T TIGR00879 352 LLIGAAGMAICLFVLG 367 (481)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9888888777766665
No 60
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=4.7e-26 Score=209.68 Aligned_cols=317 Identities=14% Similarity=0.136 Sum_probs=206.8
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
......++.+...++........|.+..+.. ..+...+..+.+++.+...++..++.+++|+++||+|||+.+..+.
T Consensus 17 ~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~ 93 (502)
T TIGR00887 17 AIVIAGVGFFTDSYDLFCISLVTKMLGYVYY---HGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 3445677778888888888888887655421 1123455667799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccchh---HHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhH
Q 018388 89 TLSIIPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (357)
Q Consensus 89 ~~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 165 (357)
++..++.++++++++.. .++.++++|+++|+ +.+...+....++.|++|+|+|++++++.+....+|..+|+.++.
T Consensus 94 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~-~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 94 IIMIIATVASGLSPGSSPKSVMATLCFWRFWLGV-GIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHccCcccchHHHHHHHHHHHHHH-HHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888875421 14678999999999 778778899999999999999999999999999999988887654
Q ss_pred H---------------------------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCC--CCCCC--cccccccccc
Q 018388 166 F---------------------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDD--DDDLT--RPIITEETEG 214 (357)
Q Consensus 166 ~---------------------------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~--~~~~~~~~~~ 214 (357)
. .+||+++.+.++..++. .+..+++||+|+... +++|+ .+......+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~ 251 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA-LYFRLTIPETPRYTADVAKDVEQAASDMSAVLQV 251 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH-HHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhcc
Confidence 2 15999998877765544 444567899988522 11111 1111111000
Q ss_pred c-ccCCCCCC-CCccccccchhHHHHHHhhhcccchHH---HHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHH---
Q 018388 215 V-NQNESNSP-VKIPVCKKIPSIRDLICLLRSSVTLSQ---AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFAD--- 286 (357)
Q Consensus 215 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 286 (357)
. +++.++.. .+++.+..+.++++.++...+++.... .....+...+.+++...+.|.++++. |+++.+.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~-G~~~~~~~~~~~ 330 (502)
T TIGR00887 252 KIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAI-GYSPPAATNNAY 330 (502)
T ss_pred ccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHH-cCCCCccchhHH
Confidence 0 00000000 000001111234443322111222111 12222333344555666788888764 876543211
Q ss_pred ---------HHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 018388 287 ---------LMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI 332 (357)
Q Consensus 287 ---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 332 (357)
......++.+++. ++.+++.||+|||+.+..+..+.+++..++.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~i~g~-~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~ 384 (502)
T TIGR00887 331 EELYKTAVGNLIIALAGTVPGY-WVTVFLVDIIGRKPIQLMGFFILTVLFFVLGF 384 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 1222233444455 78899999999999988888777776655543
No 61
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.96 E-value=5.4e-26 Score=200.67 Aligned_cols=268 Identities=15% Similarity=0.063 Sum_probs=196.5
Q ss_pred HhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-----Ccchhh-hHHHHHHHHHHHHH
Q 018388 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKAML-TLPLTLSIIPLAIL 98 (357)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-----Grk~~l-~~~~~~~~~~~~~~ 98 (357)
....+.+|.+.+| .+++..+.|+.... .+...+ .+++|+++||+ ||||.+ +.+.+..++.....
T Consensus 5 ~~~~~~~~~~~~~--------~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l 74 (356)
T TIGR00901 5 GLVGNTLPYWLRS--------KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLIL 74 (356)
T ss_pred hhHHhHHHHHHHH--------cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 4566788888764 46666778888655 455554 89999999998 899975 56777777777777
Q ss_pred HHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----h------
Q 018388 99 AYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----S------ 168 (357)
Q Consensus 99 ~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~------ 168 (357)
++.++...++.+....++.+. ..+...+...+++.|++|+|+|+++.++...+..+|.++++.+++.+ +
T Consensus 75 ~~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~ 153 (356)
T TIGR00901 75 SFLVPSTDLPLLAGLAFLIAF-FSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLI 153 (356)
T ss_pred HcCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence 777544446777777778887 66777789999999999999999999999999999999999888654 6
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhccc
Q 018388 169 --TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSV 246 (357)
Q Consensus 169 --~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (357)
||..|++.++..++..+..++..||++++++.+ +++..+.++..+.+++++
T Consensus 154 ~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~ 206 (356)
T TIGR00901 154 TLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVP---------------------------KPLTQAVLKPIREFFQRK 206 (356)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhccCCCcccccc---------------------------hhHHHHHHHHHHHHHHhc
Confidence 999999998876665554444456643211110 000011122233344555
Q ss_pred c---hHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHH-HHHHHHHHHHhhhhhccchhHHHHHHHHH
Q 018388 247 T---LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGL-AGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (357)
Q Consensus 247 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (357)
. ++...+..++.........++.|.|+++ +|+++.+.+......+. ...++. ++.+++.||+|+|+.+..+.++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~-~~~g~l~~r~g~~~~l~~~~~~ 284 (356)
T TIGR00901 207 NMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGG-LIGGIIMQPLNILYALLLFGIV 284 (356)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHH
Confidence 4 6666666677777788888999999998 69999999988887775 445555 8889999999999988888887
Q ss_pred HHHHHHHHHh
Q 018388 323 ACINMFICSI 332 (357)
Q Consensus 323 ~~i~~~~~~~ 332 (357)
.+++..++.+
T Consensus 285 ~~~~~~~~~~ 294 (356)
T TIGR00901 285 QALTNAGFVW 294 (356)
T ss_pred HHHHHHHHHH
Confidence 7777665444
No 62
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.96 E-value=2.7e-26 Score=202.41 Aligned_cols=285 Identities=14% Similarity=0.052 Sum_probs=208.7
Q ss_pred HHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHc
Q 018388 22 FATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101 (357)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~ 101 (357)
.......|.+|.+.+ +++.+..+.|++.+.+.++..++.++.|+++||+|||+.+..+.++..++...+ .+
T Consensus 14 ~~~~~~~~~lp~l~~--------~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~ 84 (355)
T TIGR00896 14 PALTSVGPLLPQIRS--------ALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA 84 (355)
T ss_pred CccccCcccHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh
Confidence 334566788888876 456667788999999999999999999999999999999999998888887776 66
Q ss_pred cchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh------hhHHHHHH
Q 018388 102 RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL------STTSAFQA 175 (357)
Q Consensus 102 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l------~~~~~f~~ 175 (357)
++ .+.+++.|++.|+ +.+...+.....+.|..| ++|+++++..+....+|..+++.+++.+ +||+.|..
T Consensus 85 ~~---~~~l~~~~~~~g~-g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~ 159 (355)
T TIGR00896 85 PG---TALLFAGTALIGV-GIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAW 159 (355)
T ss_pred cc---HHHHHHHHHHHHH-HHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 77 7888899999999 666666677788888886 6899999999999999999888777654 28888877
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHH
Q 018388 176 ATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVA 255 (357)
Q Consensus 176 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (357)
.++..++.. ...+||.+++++++. + ..+...++ ..|+|..+...+..
T Consensus 160 ~~~~~~~~~---~~~~~~~~~~~~~~~------------------~--------~~~~~~~~----~~~~~~~~~~~~~~ 206 (355)
T TIGR00896 160 WALPALLAL---LAWIPQVRRRVAANQ------------------T--------TTRLTPVR----IWRSPLAWQVTVFF 206 (355)
T ss_pred HHHHHHHHH---HHHhhhhccccCCCC------------------C--------CCCCCCch----hhcCHhHHHHHHHH
Confidence 665433322 223454432211100 0 00001111 23466666666666
Q ss_pred HHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhcc-chhHHHHHHHHHHHHHHHHHHhcC
Q 018388 256 FFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-GEAKLLSLGLFAACINMFICSISW 334 (357)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~i~~~~~~~~~ 334 (357)
++....+....+++|.|+++. |++..+.+...+...++.++++ ++.+++.||+ ++|+.+..+..+.+++...+.+.+
T Consensus 207 ~~~~~~~~~~~~~lp~~~~~~-g~~~~~~g~~~~~~~~~~i~~~-~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
T TIGR00896 207 GLQSGLYYSLIGWLPAILISH-GASAATAGSLLALMQLAQAASA-LLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP 284 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHH-HhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh
Confidence 666677777888999999875 9999999999999999999998 8889999999 456677777777777766666654
Q ss_pred cchHHHHHHHHHHhhhccccc
Q 018388 335 SAWVPYATTAFSVLVVFATPS 355 (357)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~p~ 355 (357)
+........+++++.+...|.
T Consensus 285 ~~~~~~~~~l~g~~~g~~~~~ 305 (355)
T TIGR00896 285 MHGLWAWALVLGLGQGGAFPL 305 (355)
T ss_pred hhHHHHHHHHHHHhhhhHhHH
Confidence 433332345567776665553
No 63
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.96 E-value=8.3e-26 Score=205.15 Aligned_cols=309 Identities=16% Similarity=0.193 Sum_probs=246.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhh
Q 018388 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (357)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~ 85 (357)
+++.+..++.+.++..++..+....++.+..+ .+-|+...|++.++..+..++.+++.|.++||++||++++
T Consensus 8 r~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~--------lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili 79 (524)
T PF05977_consen 8 RNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ--------LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILI 79 (524)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 45778899999999999999999999988864 2445677899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc--cchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhh
Q 018388 86 LPLTLSIIPLAILAYR--RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA 163 (357)
Q Consensus 86 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 163 (357)
.+.++..+.....++. .+....+.+++..++.|+ +.+...|+.++++.|.+|+|+..+++++.+...++..++||.+
T Consensus 80 ~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~-~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPal 158 (524)
T PF05977_consen 80 LSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGI-GSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPAL 158 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchH
Confidence 9988776655444432 222227888999999999 7788899999999999999999999999999999999999999
Q ss_pred hHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHH
Q 018388 164 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (357)
Q Consensus 164 ~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (357)
+|.+ |-.+.|.+.++..++.... ....++++++++. ..++.....++.+
T Consensus 159 gG~Lva~~G~~~~f~inalsfl~~i~~-l~~~~~~~~~~~~--------------------------~~e~~~~~l~~G~ 211 (524)
T PF05977_consen 159 GGILVAFFGAAAAFLINALSFLISILA-LLRWKPPPPPSSL--------------------------PRERFFSALREGL 211 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcccccccccc--------------------------chhhhhhhHHHHH
Confidence 9875 6688888887765544333 3333332211111 0112234667778
Q ss_pred HhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Q 018388 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (357)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (357)
+.++++|.+...++..++.++........+|.+.++.+|.++...|++.+..++++++++ ++.+++.+|+++++++..+
T Consensus 212 ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Ga-l~~~~l~~~~~~~~lv~~~ 290 (524)
T PF05977_consen 212 RYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGA-LLLPRLRRRLSSRRLVLLA 290 (524)
T ss_pred HHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-HHHHHhhcccCcchhhHHH
Confidence 888888888887777777777777778889999999999999999999999999999999 7889999999999998889
Q ss_pred HHHHHHHHHHHHhcCcchHHHH-HHHHHHhhhc
Q 018388 320 LFAACINMFICSISWSAWVPYA-TTAFSVLVVF 351 (357)
Q Consensus 320 ~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~ 351 (357)
.+..+++.+.+++.++.+.... ..+.|++...
T Consensus 291 ~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~ 323 (524)
T PF05977_consen 291 SLLFALALLLLALSPSFWLALIALFLAGAAWII 323 (524)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 9888888888888887776555 3444555443
No 64
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.2e-27 Score=204.32 Aligned_cols=273 Identities=15% Similarity=0.199 Sum_probs=213.9
Q ss_pred chhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhh
Q 018388 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (357)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l 84 (357)
+..+.+.++++...+...+.+.+..+++...+ .++++....|++++.+.+.+.+.+|+.|+++|||+||+++
T Consensus 30 ~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~--------~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~ 101 (493)
T KOG1330|consen 30 SPTLTLVILCLVNLMNYADRYTIAGVLKEVQT--------YFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI 101 (493)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhhhhHHHHH--------hcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE
Confidence 34566778888888999998887776666543 4566667779999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhh
Q 018388 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (357)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 164 (357)
.+|..++.++.++++++.. +|++.++|.+.|+ +.+...|+.+++++|.+|+++|++.+++++....+|..+|-+.+
T Consensus 102 ~vG~~iW~~Av~~~~fs~~---Fwq~~l~R~~vGi-GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvg 177 (493)
T KOG1330|consen 102 AVGIFIWTLAVFASGFSNH---FWQVLLCRGFVGI-GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVG 177 (493)
T ss_pred eeHHHHHHHHHHHHHHHHH---HHHHHHHHHHhcc-chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEee
Confidence 9999999999999999987 9999999999999 88888899999999999999999999999999999998887776
Q ss_pred HHh-----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHH
Q 018388 165 RFL-----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (357)
Q Consensus 165 ~~l-----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (357)
... .|||.|+..+++++++.++..++.+|+++...++.|. ..+........+||.+
T Consensus 178 s~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~-------------------~~~~~~~~ts~~kDl~ 238 (493)
T KOG1330|consen 178 SVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDG-------------------ENKMVKPFTSVWKDLK 238 (493)
T ss_pred eeeccCccceEEEEEeehHHHHHHHHHHHhhccCccccccccccc-------------------CCcCCCCccchHHHHH
Confidence 654 4999999999999999999888888877643332110 0000112223455543
Q ss_pred HhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhh---cccCcchHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 018388 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ---FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL 310 (357)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 310 (357)
.+.+++.+....+......+..+.+.-|.|.+.... .|.+..+..++..+...++.++. +++|.++||+
T Consensus 239 -~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGv-l~Ggiisd~~ 310 (493)
T KOG1330|consen 239 -VLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGV-LFGGIISDKL 310 (493)
T ss_pred -HHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhh-eehHHHHHHH
Confidence 344467777777777777777777777777655443 34555555566666667777776 8888888884
No 65
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.95 E-value=2.3e-25 Score=196.12 Aligned_cols=277 Identities=23% Similarity=0.323 Sum_probs=233.7
Q ss_pred HHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHH
Q 018388 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (357)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~ 91 (357)
.+....+...++.....+..|.+.++ .+.+..+.+++.+...++..++.++.|+++||+|||+.+..+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~ 74 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAED--------LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLF 74 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHH
Confidence 45667778888888899999998864 2445567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----
Q 018388 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL---- 167 (357)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l---- 167 (357)
.++......+++ ++.+++.|++.|+ +.+...+...+++.|+.|+|+|++.+++.+....+|..++|.+++.+
T Consensus 75 ~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 150 (352)
T cd06174 75 ALGSLLLAFASS---LWLLLVGRFLLGL-GGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL 150 (352)
T ss_pred HHHHHHHHHhcc---HHHHHHHHHHHHc-ccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988 8899999999999 77777899999999999999999999999999999999999988875
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccc
Q 018388 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 247 (357)
Q Consensus 168 ~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (357)
+||+.+++.+++.++..+...+ .+ |.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~-~~-----------------------------------------------------~~ 176 (352)
T cd06174 151 GWRWLFLILAILGLLLALLLLF-LL-----------------------------------------------------RL 176 (352)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HH-----------------------------------------------------HH
Confidence 6999999888776665554433 33 23
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhH-HHHHHHHHHHHH
Q 018388 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK-LLSLGLFAACIN 326 (357)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~i~ 326 (357)
++...+..++..........+.|.+.++.+|.++.+.+.......++..++. ++.+++.||+++|+ .+..+..+..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 255 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGA-LLGGLLSDRLGRRRLLLLIGLLLAALG 255 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4455666777777888889999999998889999999999999999999998 88899999999999 999999999999
Q ss_pred HHHHHhcCcchHHHH-HHHHHHhhhccccc
Q 018388 327 MFICSISWSAWVPYA-TTAFSVLVVFATPS 355 (357)
Q Consensus 327 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~ 355 (357)
.+.+...++.+..+. ..+.+.+.+...|.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 285 (352)
T cd06174 256 LLLLALAPSLALLLVALLLLGFGLGFAFPA 285 (352)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHhccchh
Confidence 888887776555444 45667776666553
No 66
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.95 E-value=3.2e-25 Score=204.49 Aligned_cols=302 Identities=16% Similarity=0.191 Sum_probs=209.1
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++.+..+++..++..++.....+.+|.+.+ +++.+..+.+++.+.+.++..++.++.|+++||+|||+.+..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--------~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 90 (496)
T PRK03893 19 WKAFSAAWLGYLLDGFDFVLITLVLTEVQG--------EFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVI 90 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 345667788888889999999988888765 345666778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
+.++..++.+++.++++ ++.+++.|++.|+ +.+...+....++.|.+|+|+|+++++.......+|..++|.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 166 (496)
T PRK03893 91 SIVLFSVGTLACGFAPG---YWTLFIARLVIGM-GMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSL 166 (496)
T ss_pred HHHHHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988 8889999999999 6677778899999999999999999999999999999999988877
Q ss_pred h----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHH------
Q 018388 167 L----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR------ 236 (357)
Q Consensus 167 l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 236 (357)
+ +||+.|++.++. .+..+......||+++.++++.+.... .+..+.. .....+......
T Consensus 167 l~~~~~w~~~f~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~----~~~~~~~------~~~~~~~~~~~~~~~~~~ 235 (496)
T PRK03893 167 VVPVWGWRALFFIGILP-IIFALWLRKNLPEAEDWKEKHAGKAPV----RTMVDIL------YRGEHRIINILLTLAAAA 235 (496)
T ss_pred HhccCCHHHHHHHHHHH-HHHHHHHHHhCCCchhhhhhccccccc----hhHHHHH------hcchhHHHHHHHHHHHHH
Confidence 5 899999875443 332333334456544322111000000 0000000 000000000000
Q ss_pred ---HHHHh-------------------------hh-cccc-hHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHH
Q 018388 237 ---DLICL-------------------------LR-SSVT-LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFAD 286 (357)
Q Consensus 237 ---~~~~~-------------------------~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 286 (357)
..... .. +++. ........+...........++|.|+++.+|++..+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~ 315 (496)
T PRK03893 236 ALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVAN 315 (496)
T ss_pred HHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHH
Confidence 00000 00 0000 001111111111111234678999998778999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 018388 287 LMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI 332 (357)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 332 (357)
+.+...++..++. ++.+++.||+++|+.+..+..+..+..+....
T Consensus 316 ~~~~~~~~~~~g~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 360 (496)
T PRK03893 316 VLFFSGFGAAVGC-CVGGFLGDWLGTRKAYVCSLLISQLLIIPVFA 360 (496)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh
Confidence 9999999999988 88899999999999888777666655544433
No 67
>TIGR00898 2A0119 cation transport protein.
Probab=99.95 E-value=1.9e-26 Score=213.04 Aligned_cols=280 Identities=18% Similarity=0.152 Sum_probs=199.3
Q ss_pred CccchhH---HHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhh
Q 018388 43 LDECSLA---IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAM 119 (357)
Q Consensus 43 ~~~~~~s---~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 119 (357)
.+|++++ ..+.|+..+++.++..+++++.|+++||+|||++++.+.++..++.++.+++++ ++.+++.|++.|+
T Consensus 116 ~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~r~l~G~ 192 (505)
T TIGR00898 116 VTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPN---YTVFLVFRLLVGM 192 (505)
T ss_pred EEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHccc---HHHHHHHHHHHHh
Confidence 3466777 788999999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred cccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-hhHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 018388 120 VCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-STTSAFQAATIVSMLAAAYMRVFLKDDVPND 198 (357)
Q Consensus 120 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~ 198 (357)
+.+...+...+++.|++|+++|+++.++...+..+|.+++|.++..+ +||+.+++.++..++..+.. +++||++++.
T Consensus 193 -~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~-~~~~esp~~l 270 (505)
T TIGR00898 193 -GIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLS-WFVPESPRWL 270 (505)
T ss_pred -hccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-HhcCCChHHH
Confidence 77777789999999999999999999999999999999999988776 79999999988866655554 6789987643
Q ss_pred CCCCCCcccccccc---cccccCCCC----CC-CCc-cccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHH
Q 018388 199 DDDDLTRPIITEET---EGVNQNESN----SP-VKI-PVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASF 269 (357)
Q Consensus 199 ~~~~~~~~~~~~~~---~~~~~~~~~----~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (357)
..+.+.++..+..+ +.++....+ .. .++ .+.+++...+ .++++|.++...+......+.....+..+
T Consensus 271 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (505)
T TIGR00898 271 ISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFL----DLFRTPNLRKTTLCLMMLWFTTAFSYYGL 346 (505)
T ss_pred HHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHH----HHhCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22221111111100 000000000 00 000 0001111222 24557777776666655555544444444
Q ss_pred HHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcc
Q 018388 270 LYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSA 336 (357)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 336 (357)
+.+..+ .+.+. .......++..+++. ++.+++.||+|||+.+..+..+.+++++++.+.++.
T Consensus 347 ~~~~~~-~~~~~---~~~~~~~~~~~i~~~-~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~ 408 (505)
T TIGR00898 347 VLDLGN-LGGNI---YLDLFISGLVELPAK-LITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVD 408 (505)
T ss_pred hccccc-cCCCh---HHHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 444443 35443 233344555666666 788999999999999999998888888777776543
No 68
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.95 E-value=1.6e-25 Score=199.24 Aligned_cols=292 Identities=12% Similarity=0.019 Sum_probs=211.8
Q ss_pred HHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcc----hhhhHHHHHH
Q 018388 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK----AMLTLPLTLS 91 (357)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk----~~l~~~~~~~ 91 (357)
..+...++.++..|.+|.+.+| .+.+..+.|++.+++.++..++++++|+++||+||| +.+.+....
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~~--------~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~- 82 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLKG--------QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL- 82 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHh--------cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH-
Confidence 3556667789999999999874 456678889999999999999999999999999994 333222221
Q ss_pred HHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----
Q 018388 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL---- 167 (357)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l---- 167 (357)
........+++ +|.+++.|++.|+ +.+...|...++..++ +++|+++.+......++|..+||.+++++
T Consensus 83 -~~~~~~~~~~~---~~~l~i~~~l~g~-~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~ 155 (382)
T PRK11128 83 -FAVAFWFGAHS---FWLLFVAIGLFNL-FFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF 155 (382)
T ss_pred -HHHHHHHhccc---HHHHHHHHHHHHH-HHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 12223334567 8888899999998 5566667888888876 46688888889988999999999999875
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccc
Q 018388 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 247 (357)
Q Consensus 168 ~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (357)
+||..|++.++..++..+ ..+..||++++++++ + + .++..++.+ .++|+|+
T Consensus 156 g~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------------------~-~----~~~~~~~~~----~i~~~~~ 206 (382)
T PRK11128 156 GEQAILWILTAGVASMLL-GQLLRPTIMPQGESR-------------------Q-Q----ESAGWPAWK----ALLKEPT 206 (382)
T ss_pred ChhHHHHHHHHHHHHHHH-HHHccCCCCCccccc-------------------c-c----cccccchHH----HHHcChh
Confidence 899999887765444333 233344432211110 0 0 000011222 3556888
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHH
Q 018388 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (357)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~ 327 (357)
++...+..++.........++.|.|.+| .|.++.+.|.+.+...+...+.. ++.+++.||+++|+.+..+....+++.
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~l~~~~~~~~~~~ 284 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIF-AFSNRLFRRWSARDLLLLSAICGVVRW 284 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 8888887777777777788889999977 59999999999998888777777 888999999999999999998888888
Q ss_pred HHHHhcCcchHHHH-HHHHHHhhhcccc
Q 018388 328 FICSISWSAWVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 328 ~~~~~~~~~~~~~~-~~~~~~~~~~~~p 354 (357)
+++...++.+..+. ..+.+++.+...|
T Consensus 285 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 312 (382)
T PRK11128 285 GLMGSTTALPWLIVIQILHCGTFTVCHL 312 (382)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 77777777665554 4555666655444
No 69
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=1.8e-25 Score=225.61 Aligned_cols=317 Identities=15% Similarity=0.118 Sum_probs=225.7
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhh
Q 018388 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (357)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~ 85 (357)
+.+.+..+++..++..++.......+..+..... +.+.+....+++.+++.++..++++++|+++||+|||++++
T Consensus 7 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~ 81 (1146)
T PRK08633 7 KIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAY-----DGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIR 81 (1146)
T ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHc-----CcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHH
Confidence 4556667777777766666544444443433321 12233456799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH---ccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHh
Q 018388 86 LPLTLSIIPLAILAY---RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (357)
Q Consensus 86 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (357)
.+.++..+..++..+ +++ ++.+++.|+++|+ +.+...+...+++.|++|+++|++++++.+.+..+|.++||.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~ 157 (1146)
T PRK08633 82 IVKLFEVGLTLLIVLAYYLGW---FWLAFAVTFLLGA-QSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTA 157 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHH-HHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHH
Confidence 888776665554443 456 8899999999999 778888999999999999999999999999999999999999
Q ss_pred hhHHhh-------------hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCcccc
Q 018388 163 AARFLS-------------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVC 229 (357)
Q Consensus 163 ~~~~l~-------------~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (357)
+++++. |++.+.+..+...+..++..+.+||.++....+.+ +...
T Consensus 158 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~ 215 (1146)
T PRK08633 158 LFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFD----------------------KKKY 215 (1146)
T ss_pred HHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCccccc----------------------cccc
Confidence 988762 23333333333233333334456766543222100 0000
Q ss_pred ccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcc-hHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018388 230 KKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN-QFADLMLIAGLAGTISQLLFMPLLAP 308 (357)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (357)
......++.++.+++++.++...+..++..........++|.|+++.+|++.. ..+++.+..+++.+++. ++.+++.|
T Consensus 216 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~-~~~g~l~~ 294 (1146)
T PRK08633 216 LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGS-LLAGRLSG 294 (1146)
T ss_pred ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH-HHHHHHhC
Confidence 11112233345566788888777777777777777888999999998899998 88999999999988888 88899999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhcCcchHHHH-HHHHHHhhhcccc
Q 018388 309 ILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 309 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p 354 (357)
|+++++.+.++.++.+++.+++.+..+.+...+ ..+++++.+...+
T Consensus 295 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 341 (1146)
T PRK08633 295 RHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIV 341 (1146)
T ss_pred CceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhH
Confidence 999988888888888777777776665544433 4555666555443
No 70
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.95 E-value=5.1e-25 Score=197.01 Aligned_cols=275 Identities=15% Similarity=0.068 Sum_probs=193.6
Q ss_pred HHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHH
Q 018388 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (357)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~ 97 (357)
+++.++.....+..+.+.++...+ .++...+........+...++..+++++.|+++||+|||+++..+.++..++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPP-SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCC-CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 345667777777767766663221 1122222222233344455666689999999999999999999999999999999
Q ss_pred HHHccchhH-----HHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH------
Q 018388 98 LAYRRSISF-----FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF------ 166 (357)
Q Consensus 98 ~~~~~~~~~-----~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~------ 166 (357)
+++++++.. .+.+++.|+++|+ +.+...+...+++.|+.|+|+|++..+..+....+|..+++.++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 82 IGLLPSYATIGIWAPILLLLARLIQGF-SLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHh-hccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999988321 1257889999999 6677778899999999999999999999999999999999876543
Q ss_pred ------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHH
Q 018388 167 ------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (357)
Q Consensus 167 ------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (357)
.+||+.|++.+++.++.. ......||+++.++++++ +++...+.++
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~--- 212 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIGL-YLRRNLEETPVFEKAQEK------------------------HKKKRGPIRE--- 212 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHHH-HHHHhcCCChhHHHHHhc------------------------cccccCCHHH---
Confidence 379999988776644433 333445655432221100 0001112222
Q ss_pred hhhccc-chHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Q 018388 241 LLRSSV-TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (357)
Q Consensus 241 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (357)
.+++++ .++......++..........++|.|.++.+|.++.+.+.......+...++. ++.+++.||+++|+.+...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~ 291 (394)
T TIGR00883 213 TLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITI-PLSGALSDRIGRRPVLIIF 291 (394)
T ss_pred HHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHhchHHHHHHH
Confidence 122222 35666666666667777778899999988889999999999988888888888 8889999999999877655
Q ss_pred HHHH
Q 018388 320 LFAA 323 (357)
Q Consensus 320 ~~~~ 323 (357)
..+.
T Consensus 292 ~~~~ 295 (394)
T TIGR00883 292 TVLA 295 (394)
T ss_pred HHHH
Confidence 4443
No 71
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=1.7e-26 Score=192.00 Aligned_cols=309 Identities=17% Similarity=0.243 Sum_probs=207.5
Q ss_pred HhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHH
Q 018388 28 VPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFF 107 (357)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~ 107 (357)
.|.......++.....++.+.+....|++.+.+++.+++.++.+|.++||+|||++++.|++..++...+.+.++| +
T Consensus 45 ~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~---F 121 (451)
T KOG2615|consen 45 YPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN---F 121 (451)
T ss_pred hHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 3344444444322223344466788999999999999999999999999999999999999999999999999999 8
Q ss_pred HHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHhhh------HHHHHH----HH
Q 018388 108 YAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLST------TSAFQA----AT 177 (357)
Q Consensus 108 ~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------~~~f~~----~~ 177 (357)
..+.+.|++.|+ .-|.. ....++++|+.++|+|+++++..+..+++|.++||.+||++.. +.+|.. ..
T Consensus 122 ~afv~aR~l~Gi-~kgnl-~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~ 199 (451)
T KOG2615|consen 122 AAFVLARFLGGI-FKGNL-SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVF 199 (451)
T ss_pred HHHHHHHHhhhh-ccCch-HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHH
Confidence 667777999999 66777 6899999999999999999999999999999999999999744 222332 22
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccc-------hHH
Q 018388 178 IVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT-------LSQ 250 (357)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 250 (357)
+..........+++||+-+.+++.++..+..+...+ ..+..+.+.......+ ||+. ...
T Consensus 200 i~a~~~v~~~~~~lpETL~~rk~~~~~~~~~~~~~~-------------~~~~~~~~~~~~v~~l-rn~p~~~~i~~~~i 265 (451)
T KOG2615|consen 200 ILAAGDVTFFPWFLPETLPLRKRNDEHSTLQEAADD-------------RLALLKFARIFKVAAL-RNPPLLDFISVLRI 265 (451)
T ss_pred HHHHHHHHHHHHhCCccccchhhcccccchhhhhhh-------------hhhhcchhhhhhhhhh-cCccccchHHHHHH
Confidence 222221233446789986655543110000000000 0000000001101111 1222 223
Q ss_pred HHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccc--hhHHHHHHHHHHHHHHH
Q 018388 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMF 328 (357)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~i~~~ 328 (357)
..+..+.+...+.....+.+.+..+.+|+++.+.|.+++..++.+.+.+ ....+..+|.. .+..+..+..++.-.++
T Consensus 266 ~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~q-l~~~~~l~~~~~~~~a~l~~~l~~~vP~~l 344 (451)
T KOG2615|consen 266 FGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQ-LALVPILPRYKGNIKAVLLFSLLLIVPAFL 344 (451)
T ss_pred HHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHH-HhccccccccccchhhHHHHHHHHHHHHHH
Confidence 4445555555556666666666678899999999999999999999998 44445556555 45566777777777777
Q ss_pred HHHhcCcchHHHHH-HHHHHhhhcccccC
Q 018388 329 ICSISWSAWVPYAT-TAFSVLVVFATPSV 356 (357)
Q Consensus 329 ~~~~~~~~~~~~~~-~~~~~~~~~~~p~~ 356 (357)
++........++.. .+..+..+...|++
T Consensus 345 lls~~~~~~~l~~~s~l~sf~~A~~vt~L 373 (451)
T KOG2615|consen 345 LLSLARTPVVLYLGSTLKSFSTASVVTCL 373 (451)
T ss_pred HHhccccchhhhHHHHHHHHHHHHhhHHH
Confidence 77777776666663 44455555555543
No 72
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=6.5e-26 Score=211.80 Aligned_cols=298 Identities=12% Similarity=0.145 Sum_probs=215.7
Q ss_pred HHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHH
Q 018388 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPL 95 (357)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~ 95 (357)
..+...+..+...+.++.+.+ +++++..+.|++.+.+.+++.++.++.|++.||+|||+.+.++.++.++++
T Consensus 41 ~~~~~~~~~g~~~~~l~~iek--------~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTIER--------RFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHhhchhhhh--------hhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHH
Confidence 444444555666677776644 566777788999999999999999999999999999999999999999999
Q ss_pred HHHHHccc------------------------------------------------hhHHHHHHHHHHHhhhcccchHHH
Q 018388 96 AILAYRRS------------------------------------------------ISFFYAYYALRTLTAMVCEGSINC 127 (357)
Q Consensus 96 ~~~~~~~~------------------------------------------------~~~~~~~~~~r~l~G~~~~~~~~~ 127 (357)
+++++.+- ...+..++++|+++|+ +.+...+
T Consensus 113 ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~Gi-G~~~~~~ 191 (633)
T TIGR00805 113 FLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGI-GATPIFP 191 (633)
T ss_pred HHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhc-cCCcchh
Confidence 99887630 0024567899999999 7788889
Q ss_pred HHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh--------------------------hhHHHHHHHHHHHH
Q 018388 128 LALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--------------------------STTSAFQAATIVSM 181 (357)
Q Consensus 128 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l--------------------------~~~~~f~~~~~~~~ 181 (357)
...+++.|++|+++|++.+++......+|..+|+++++++ +||..|++.+++.+
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~ 271 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVAL 271 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888763 16677888887766
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHh
Q 018388 182 LAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLS 261 (357)
Q Consensus 182 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (357)
+..+. ++.+|++.++++.+.+.+. . +.+ ..++.+.+.+........+..+..+.+.++|.++...+..++....
T Consensus 272 l~~v~-l~~~p~~lp~~~~~~~~~~-~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~ 345 (633)
T TIGR00805 272 LTSIP-FFFFPKALPKEGKRVNVDV-H---ETE-KLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLA 345 (633)
T ss_pred HHHHH-HHhCccccCCcccccchhh-h---hhh-cccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 65554 4456665432211100000 0 000 0000000000000011112222344466799999999999999999
Q ss_pred hhhhhHHHHHhhhhhcccCcchHHHHHHHHHHH-HHHHHHHHHhhhhhccc--hhHHHHHHHHHHHHHHHH
Q 018388 262 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLA-GTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFI 329 (357)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~i~~~~ 329 (357)
..++.+++|.|+++.+|+++.+++.+.....+. .+++. +++|++.||++ .|+.+..+.....++.+.
T Consensus 346 ~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~-~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 346 FNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGY-LIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHH-hhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988877764 45555 89999999988 467777777777666444
No 73
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=3.5e-25 Score=222.82 Aligned_cols=290 Identities=11% Similarity=0.061 Sum_probs=207.0
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++.+..++...++..++.++....++.+....+ ..+...-.....++..+++.+++.++++++|+++||+|||+++..
T Consensus 10 ~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~ 87 (1140)
T PRK06814 10 SRRFAPLFWTQFFGAFNDNFLKNALVILILYGL--SGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKI 87 (1140)
T ss_pred ccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHh--ccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHH
Confidence 445666777778877776655444333322211 111111233457889999999999999999999999999997643
Q ss_pred ---HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhh
Q 018388 87 ---PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA 163 (357)
Q Consensus 87 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 163 (357)
..+...+........++ ++.++++|+++|+ +.+...|+..+++.|++|+++|++++++.+++.++|.++||.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~s---~~~l~~~~~l~gi-~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l 163 (1140)
T PRK06814 88 LKFAEIGIAALAIYGFHLNS---VPLLFAALFLMGI-HSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTII 163 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHH-HHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHH
Confidence 22222222233333467 8999999999999 7788889999999999999999999999999999999999999
Q ss_pred hHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHH
Q 018388 164 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (357)
Q Consensus 164 ~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (357)
++++ +|++.|+..++. .+..++..+.+|++++.++... ...+......+.+
T Consensus 164 ~g~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~ 218 (1140)
T PRK06814 164 GGLATISGNFVILVALLMGI-AVLGWLASLFIPKTGNAAPDLK------------------------IDRNIIRSTITLL 218 (1140)
T ss_pred HHHHHhccccHHHHHHHHHH-HHHHHHHHhhCCCCCCCCCCCe------------------------eccchHHHHHHHH
Confidence 9986 788888444444 3333444555666543222110 0000111223445
Q ss_pred HhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Q 018388 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (357)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (357)
+.+++++.++...+..++..+.......++|.|+++.+|.++...|.+.+..+++.++++ ++.+++.|+..+++.+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~-~~~g~l~~~~~~~~~~~~~ 297 (1140)
T PRK06814 219 KYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGS-FLASKLSEGRITLLYVPIG 297 (1140)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHH-HHHHHHhCCceeeeeehHH
Confidence 567788999998888888888888888999999999999999999999999999999998 8889999877766655555
Q ss_pred HHHHHHHHH
Q 018388 320 LFAACINMF 328 (357)
Q Consensus 320 ~~~~~i~~~ 328 (357)
.++.++..+
T Consensus 298 ~~~~~~~~~ 306 (1140)
T PRK06814 298 ALLMGLFGL 306 (1140)
T ss_pred HHHHHHHHH
Confidence 555544443
No 74
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.95 E-value=1.3e-24 Score=194.59 Aligned_cols=300 Identities=12% Similarity=0.058 Sum_probs=208.7
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
|.++.+....++...+.....|.+|.+..+ +.+.+..+.|++.+++.++..++++++|+++||+|||+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~ 74 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHD-------VNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWI 74 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 456777788888999999999999999875 3466677889999999999999999999999999999999887
Q ss_pred HHHHHHHHHHH---HHccc--hhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHh
Q 018388 88 LTLSIIPLAIL---AYRRS--ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (357)
Q Consensus 88 ~~~~~~~~~~~---~~~~~--~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (357)
.....+..... .+.+. ...+....+.+++.|+ +.+...+....+..|..+ ++++..+......++|..+||.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~ 151 (396)
T TIGR00882 75 ISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGF-VFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCAS 151 (396)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-HhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHH
Confidence 76655443322 12221 0113345667888888 556666777777777543 3445667777888899999999
Q ss_pred hhHHh---hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHH
Q 018388 163 AARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (357)
Q Consensus 163 ~~~~l---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (357)
+++.+ +||.+|++.+.+.++..++.+...||++++++.+ + + .+ .++ ++++.++..
T Consensus 152 ~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~-~~---~~~---~~~~~~~~~ 209 (396)
T TIGR00882 152 IAGILFSIDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVA-N--------------A-LG---ANA---SAFSLKLAL 209 (396)
T ss_pred HHhhhhccCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhh-c--------------c-cc---ccc---CCCCHHHHH
Confidence 98875 8999999988887766555444444432211110 0 0 00 000 011123333
Q ss_pred HhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhc---ccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHH
Q 018388 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (357)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (357)
+ +.|+|.++...+..+...........+.+.|.++.+ +.+....|...+...+...++. ...+++.||+++|+.+
T Consensus 210 ~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~-~~~g~l~~r~g~~~~l 287 (396)
T TIGR00882 210 E-LFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIM-FCAPLIINRIGAKNAL 287 (396)
T ss_pred H-HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhH
Confidence 3 345777766666665555555566667888887764 4455667888888888888887 7889999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCcchHHHH
Q 018388 317 SLGLFAACINMFICSISWSAWVPYA 341 (357)
Q Consensus 317 ~~~~~~~~i~~~~~~~~~~~~~~~~ 341 (357)
..+..+.++...+....++.+..+.
T Consensus 288 ~~~~~l~~l~~~~~~~~~~~~~~~~ 312 (396)
T TIGR00882 288 LIAGTIMSVRIIGSSFATTALEVVI 312 (396)
T ss_pred HHHHHHHHHHHHHHHhcCChHHHHH
Confidence 9988888887777666666655443
No 75
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.95 E-value=1.6e-24 Score=196.77 Aligned_cols=294 Identities=11% Similarity=0.066 Sum_probs=199.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHH-HHHHhhhcccc
Q 018388 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYA-LRTLTAMVCEG 123 (357)
Q Consensus 45 ~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~l~G~~~~~ 123 (357)
+++.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++..++.++++++++ ++.+++ .|+++|+ +.+
T Consensus 48 ~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~l~G~-~~~ 123 (455)
T TIGR00892 48 IFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSN---VIELYLTAGFITGL-GLA 123 (455)
T ss_pred HhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHh-cch
Confidence 45666677899999999999999999999999999999999999999999999999988 776654 5789999 656
Q ss_pred hHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 018388 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199 (357)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~ 199 (357)
...+...+++.++++ ++|+++.++.+.+..+|..++|.+++.+ +||+.|++.+++.++..+..++..|+.+.++.
T Consensus 124 ~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~ 202 (455)
T TIGR00892 124 FNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRV 202 (455)
T ss_pred hhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCccccc
Confidence 555667788889885 7899999999999999999998887764 89999999988866655544444333221111
Q ss_pred CCCCCcccccccccccccCCCCCC-CCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcc
Q 018388 200 DDDLTRPIITEETEGVNQNESNSP-VKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFH 278 (357)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 278 (357)
.+.+.+ +..+.+...++ ..+...++..+..+ .+ ..++|+++......++..........++|.|.++. |
T Consensus 203 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~-g 272 (455)
T TIGR00892 203 SKSKSK-------EGLPPDGSTKKLSKKSTAEKINRFLD-FS-LFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDK-G 272 (455)
T ss_pred cccccc-------ccCCCCCccccccccchhhhhhhhcc-hH-HhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHc-C
Confidence 000000 00000000000 00000000001111 12 34578888887777777777778888999999874 9
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHhhhhhc--cchhHHHH--HHHHHHHHHHHHHHhcCcchHHHH-HHHHHHhhhccc
Q 018388 279 FNKNQFADLMLIAGLAGTISQLLFMPLLAPI--LGEAKLLS--LGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFAT 353 (357)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 353 (357)
++..+.+...+..+++..+++ ++.+++.|| .++++... .+....+++.++....++.+..+. ..+.+++.+...
T Consensus 273 ~s~~~~g~~~~~~~~~~~~~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~ 351 (455)
T TIGR00892 273 VDEYEAAFLLSIIGFVDIFAR-PSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVG 351 (455)
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHH
Confidence 999999999999999988888 788899987 33343333 233333444444455555554443 455566665544
Q ss_pred c
Q 018388 354 P 354 (357)
Q Consensus 354 p 354 (357)
|
T Consensus 352 ~ 352 (455)
T TIGR00892 352 A 352 (455)
T ss_pred H
Confidence 4
No 76
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.94 E-value=9.5e-25 Score=196.89 Aligned_cols=310 Identities=12% Similarity=0.033 Sum_probs=203.2
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++.++.+.+..++..++.+...|.+|.++++ +++.+..+.|++.+++.++..++++++|+++||+|||++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~ 81 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHD-------INGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLW 81 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 5567777888888889889999999999875 456777889999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHH---Hccch--hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhH
Q 018388 87 PLTLSIIPLAILA---YRRSI--SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (357)
Q Consensus 87 ~~~~~~~~~~~~~---~~~~~--~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (357)
+..+..+...... .++.. ..+....++++..|. +.....+....+..+. .+++++.++......++|..++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~ 158 (420)
T PRK09528 82 IISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGF-GFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCA 158 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHH
Confidence 7665554432211 11110 001112333444443 2222223333333222 24567788888888999999999
Q ss_pred hhhHHh---hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHH
Q 018388 162 LAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL 238 (357)
Q Consensus 162 ~~~~~l---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (357)
.+++.+ +|+++|++.+++.++..+..++..||++++++.+ + +++ + .+++.+.++.
T Consensus 159 ~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------~~~---~---~~~~~~~~~~ 216 (420)
T PRK09528 159 FIAGILFNINPQINFWLGSGSALILLVLLFFAKPDAPSTAKVA-N---------------ALG---A---NASAVSLKDA 216 (420)
T ss_pred HHHHHHHhcCchHhHHHHHHHHHHHHHHHhcccccccchhhhc-c---------------chh---c---ccccccHHHH
Confidence 998876 7899999888776665555444444432211110 0 000 0 0011123343
Q ss_pred HHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhc---ccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHH
Q 018388 239 ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (357)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (357)
.+ ..|+|.++...+..+...........+.|.|..+.+ +.+..+.|.+.+...+...++. +..+++.||+++|+.
T Consensus 217 ~~-~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~ 294 (420)
T PRK09528 217 LA-LLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIM-FFAPFIINRIGAKNA 294 (420)
T ss_pred HH-HccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcchh
Confidence 33 334676666555555554555555566777776543 4555677888888888888887 888999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCcchHHHH-HHHHHHhhh
Q 018388 316 LSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVV 350 (357)
Q Consensus 316 ~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~ 350 (357)
+..+..+.+++..++.+.++.+..+. ..+.+.+.+
T Consensus 295 ~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~ 330 (420)
T PRK09528 295 LLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVP 330 (420)
T ss_pred hHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 99988888888888887777665544 233344433
No 77
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.94 E-value=7.7e-24 Score=193.63 Aligned_cols=280 Identities=14% Similarity=0.127 Sum_probs=198.9
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-----Ccc
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRK 81 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-----Grk 81 (357)
+|+...++...+..+.......+.+|.+.++. +.+..+.|.. +...... ++.+++|+++||+ |||
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~--------g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grr 80 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMTVE--------NIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRR 80 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCc
Confidence 34456677777788888889999999998752 3444455664 2333333 6889999999999 999
Q ss_pred hh-hhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhh
Q 018388 82 AM-LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (357)
Q Consensus 82 ~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 160 (357)
|. +..+.+...++...+++.+....++.+.+.+++.++ +.+...+...+++.|++|+|||+++.++...+..+|.+++
T Consensus 81 r~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~-~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg 159 (491)
T PRK11010 81 RGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAF-CSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVS 159 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHH
Confidence 86 557777777777777776433337888889999998 6677778899999999999999999999999999999999
Q ss_pred HhhhHH-----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhH
Q 018388 161 TLAARF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI 235 (357)
Q Consensus 161 ~~~~~~-----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (357)
+.++.. .|||..|++.+++.++..+.. +..||+++.++++ + + ..++..+++
T Consensus 160 ~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~-~~~~e~~~~~~~~-------------------~---~-~~~~~~~~l 215 (491)
T PRK11010 160 GGLALWLADRYLGWQGMYWLMAALLIPCIIAT-LLAPEPTDTIPVP-------------------K---T-LEQAVVAPL 215 (491)
T ss_pred HHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCccccccc-------------------c---c-hhhhHHHHH
Confidence 866654 389999999988766654443 3467754321110 0 0 000001122
Q ss_pred HHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHH-HHHHHHHHHHHHhhhhhccchhH
Q 018388 236 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIA-GLAGTISQLLFMPLLAPILGEAK 314 (357)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~ 314 (357)
++ +++++..+...+..++..........+.+.|+.+..|+++.+.+...... .++.+++. ++.|++.||+++|+
T Consensus 216 ~~----~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~-ll~G~L~dr~g~~~ 290 (491)
T PRK11010 216 RD----FFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGA-LYGGILMQRLSLFR 290 (491)
T ss_pred HH----HHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhHHH
Confidence 22 33456666555555666666666777888888777799999999987544 45667776 89999999999988
Q ss_pred HHHHHHHHHHHH
Q 018388 315 LLSLGLFAACIN 326 (357)
Q Consensus 315 ~~~~~~~~~~i~ 326 (357)
.+..+..+.++.
T Consensus 291 ~l~i~~~l~~l~ 302 (491)
T PRK11010 291 ALMIFGILQGVS 302 (491)
T ss_pred HHHHHHHHHHHH
Confidence 777666554444
No 78
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=8e-24 Score=178.40 Aligned_cols=308 Identities=17% Similarity=0.118 Sum_probs=250.6
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
.+..+....++.++......+.+|.+.+ .++++..+.++++..+..++.+.+++.|++.+|+|+|+-+++++
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~--------~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL 85 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKE--------VFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGL 85 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHH--------HhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHH
Confidence 4455556666777777888888888866 56778888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-
Q 018388 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (357)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l- 167 (357)
.+.++++.+..-+.+...+..++++-++.|. +.+...+....+++...++++-.+.+++.+..+++|.++||.+++.+
T Consensus 86 ~l~avg~~lF~pAa~~~~y~~FL~~lFila~-Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~li 164 (422)
T COG0738 86 LLYAVGAALFWPAASSKSYGFFLVALFILAS-GIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLI 164 (422)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHh-hhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 9999999998766555548888999999999 88999999999999999999999999999999999999999998764
Q ss_pred ----------------------hhHHHHHHHHHHHHHHHHHHHH-hccCCCCCCCCCCCCcccccccccccccCCCCCCC
Q 018388 168 ----------------------STTSAFQAATIVSMLAAAYMRV-FLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPV 224 (357)
Q Consensus 168 ----------------------~~~~~f~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (357)
.++++|...+....+..+.... ..|+.++..+++
T Consensus 165 ls~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~----------------------- 221 (422)
T COG0738 165 LSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSL----------------------- 221 (422)
T ss_pred HhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccc-----------------------
Confidence 2467777776664444333221 223322222211
Q ss_pred CccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHh
Q 018388 225 KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMP 304 (357)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (357)
. +.++. ....++++|.++...+..|++-..+....++++.|+.|..|.+..+.++..+....+.++++ +++.
T Consensus 222 ---~-~~~~~---~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGR-Fig~ 293 (422)
T COG0738 222 ---G-ASGSA---GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGR-FIGS 293 (422)
T ss_pred ---c-ccccc---hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 0 00000 12225668999999999999999999999999999999779999999999999999999999 8888
Q ss_pred hhhhccchhHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHhhhcccccC
Q 018388 305 LLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSV 356 (357)
Q Consensus 305 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 356 (357)
++.+|++..+.+........+-++...++++.+.++...+++...++.+|++
T Consensus 294 ~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTI 345 (422)
T COG0738 294 ALMSRIKPEKYLAFYALIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTI 345 (422)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHH
Confidence 9999999999998888888888888888888888888888999999999875
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.94 E-value=7.4e-24 Score=189.92 Aligned_cols=274 Identities=15% Similarity=0.096 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-----Ccch-hhhHH
Q 018388 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKA-MLTLP 87 (357)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-----Grk~-~l~~~ 87 (357)
....+...+..+...+.+|.++++ .+.+..++|++..+... .+..+++|+++||+ |||| .+..+
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~--------~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~ 74 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV--------EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLT 74 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHH
Confidence 445566677788888999999974 36677788988666665 68999999999999 8876 67788
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH-
Q 018388 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (357)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~- 166 (357)
.++.+++.....+.++...++.+++..++.++ ..+...+...+++.|+.|+|||+++.++...+.++|.++++.+++.
T Consensus 75 ~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l 153 (402)
T PRK11902 75 QVGLAASIAAMAFCPPHAALWPLAGLAVLVAF-LSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWL 153 (402)
T ss_pred HHHHHHHHHHHHhcCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 88888887777777443336777778777787 6677889999999999999999999999999999999998876655
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhh
Q 018388 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (357)
Q Consensus 167 ----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (357)
.+||..|++.+++.++..+. .+..||++++++++ + +..++.++.++.+
T Consensus 154 ~~~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~~~~~~~-----------------------~----~~~~~~~~~~~~l 205 (402)
T PRK11902 154 ADRVLGWGNTYLLMAGLMLAGALT-TLWAPEPEVPARPP-----------------------R----SLGEAVVGPLRDF 205 (402)
T ss_pred HhcccCHHHHHHHHHHHHHHHHHH-HHhcCCCccccccc-----------------------c----hhHHHHHHHHHHH
Confidence 38999999988876554443 45567654322111 0 0000122223345
Q ss_pred hcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHH-HHHHHHHHHhhhhhccchhHHHHHHHH
Q 018388 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLA-GTISQLLFMPLLAPILGEAKLLSLGLF 321 (357)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (357)
+|+|.++..++..++..........+.+.++.+.+|+++.+.+.+....+.. ..++. ++.+++.||+++|+.+..+..
T Consensus 206 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~-~~~g~l~~r~g~~~~l~~~~~ 284 (402)
T PRK11902 206 FSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGA-LAGGTLMVRLGLYRSLMLFGV 284 (402)
T ss_pred HhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHHH
Confidence 6788888777766666555444445555666666799999999988766554 56666 888999999999888777666
Q ss_pred HHHHHH
Q 018388 322 AACINM 327 (357)
Q Consensus 322 ~~~i~~ 327 (357)
...+..
T Consensus 285 ~~~l~~ 290 (402)
T PRK11902 285 LQAVSN 290 (402)
T ss_pred HHHHHH
Confidence 655543
No 80
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=5.8e-27 Score=195.99 Aligned_cols=295 Identities=19% Similarity=0.184 Sum_probs=234.7
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhc------------------------------------------CCCccch
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALC------------------------------------------PGLDECS 47 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~ 47 (357)
+..+....+++.+....+.|.+|.|+.|..+ ....+.+
T Consensus 23 lviv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~ 102 (464)
T KOG3764|consen 23 LVIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAISLD 102 (464)
T ss_pred EEEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhccCcc
Confidence 3456777888888899999999999998442 0012344
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHH
Q 018388 48 LAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINC 127 (357)
Q Consensus 48 ~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 127 (357)
.+..++|++.+...+.+.+.+|+.|.+.||+|+|-.++++......+++++++.++ ++.++++|.+||+ +.++..+
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s---y~~l~vAR~LQgv-gsA~~~t 178 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS---YPMLFVARSLQGV-GSAFADT 178 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch---hHHHHHHHHHhhh-hHHHHHh
Confidence 55678899999999999999999999999999999999999999999999999999 8999999999999 7788889
Q ss_pred HHHHHHhhCCCcc-chhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 018388 128 LALAYVADNISER-QRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDD 202 (357)
Q Consensus 128 ~~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 202 (357)
+..++++|.+|+| +|++++|+...+.++|-++||.+||.+ |.+.+|++.+++.++...+-++.++.++.+++..
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~- 257 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDST- 257 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcccc-
Confidence 9999999999965 589999999999999999999999986 8899999999998888777666665443332111
Q ss_pred CCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcc
Q 018388 203 LTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN 282 (357)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 282 (357)
.+..++.+ +.++|..+.........+.........++.+..|.+.-+.-
T Consensus 258 ---------------------------~~~~~~~~----Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w 306 (464)
T KOG3764|consen 258 ---------------------------EQGTPMWS----LLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGW 306 (464)
T ss_pred ---------------------------ccCccHHH----HHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCc
Confidence 11123333 34588888888777777888888899999999888774444
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhccchhH--HHHHHHHHHHHHHHHHHhcCcchHHHH
Q 018388 283 QFADLMLIAGLAGTISQLLFMPLLAPILGEAK--LLSLGLFAACINMFICSISWSAWVPYA 341 (357)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~ 341 (357)
+.|..+....+...++. -+.+.+.||++..+ ....+++..++.+....++++...+++
T Consensus 307 ~~G~~fLp~~~~y~ig~-~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~v 366 (464)
T KOG3764|consen 307 EVGLAFLPASLSYAIGT-NLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWV 366 (464)
T ss_pred ceeeeecccccchhccC-chHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhh
Confidence 88998888888888888 67799999999433 334445555555555566666555544
No 81
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=4.4e-24 Score=188.61 Aligned_cols=281 Identities=19% Similarity=0.173 Sum_probs=199.3
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhccc
Q 018388 43 LDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122 (357)
Q Consensus 43 ~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 122 (357)
.++...+. .-+.+.+++.+|.++|+...|.++||+|||..+.++.++..++..+..++...+.+..++++|++.|+ ..
T Consensus 53 ~s~~~~~~-lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl-~~ 130 (485)
T KOG0569|consen 53 LSDSTLDL-LWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGL-AC 130 (485)
T ss_pred CChHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-Hh
Confidence 33434443 35889999999999999999999999999999999999998888888877655558999999999999 77
Q ss_pred chHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH------hhhHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 018388 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF------LSTTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (357)
Q Consensus 123 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 196 (357)
|.......-++.|..|++.||......+.+..+|..+|..++.- -.|++.+....+.+++. ++...++||+|+
T Consensus 131 gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~-l~~l~~~PESPk 209 (485)
T KOG0569|consen 131 GLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQ-LALLPFLPESPK 209 (485)
T ss_pred HHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHH-HHHHhcCCCCcc
Confidence 88888999999999999999999999999999999999655532 36888888887775554 444667999998
Q ss_pred CCCC-CCCCccc---ccccccccccCCCC------CCCCccccccchhHHHHHHhhhcccchHHH----HHHHHHHHHh-
Q 018388 197 NDDD-DDLTRPI---ITEETEGVNQNESN------SPVKIPVCKKIPSIRDLICLLRSSVTLSQA----AVVAFFSGLS- 261 (357)
Q Consensus 197 ~~~~-~~~~~~~---~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~- 261 (357)
..-. +.|.+++ .+..+.+.+.+++. .++++..+++..++++.+ +++..+.- +...+.+.+.
T Consensus 210 ~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~----~~~~lR~~~~i~~~v~~~qq~sG 285 (485)
T KOG0569|consen 210 YLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLL----KNPTLRRPLLIGIVVSFAQQFSG 285 (485)
T ss_pred hHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHh----cCcchhHHHHHHHHHHHHHHhcC
Confidence 6433 3333333 22222221111110 001111111233444433 34443332 2233333322
Q ss_pred hhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 018388 262 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI 332 (357)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 332 (357)
......+....+++. |++..++-+.....+....+.. +++.++.||.|||++++.+..++.+..+++..
T Consensus 286 i~ai~~Yst~i~~~a-G~~~~~a~~an~~~g~v~~~~t-~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~ 354 (485)
T KOG0569|consen 286 INAIFFYSTSIFKTA-GFTPEEAQYANLGIGIVNLLST-LVSPFLIDRLGRRPLLLISLSLMAVALLLMSI 354 (485)
T ss_pred cceeHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Confidence 223344444455554 9999999999999999999988 99999999999999999999999888666544
No 82
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=3.1e-24 Score=192.07 Aligned_cols=277 Identities=17% Similarity=0.086 Sum_probs=217.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccc
Q 018388 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEG 123 (357)
Q Consensus 44 ~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 123 (357)
++.+....+.|.+.+++.++++++.++.|.+.||++..+.+..+.+.+++..++....+| ++.+++.|++.|+ ..+
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s---~~~~ialr~llGl-~es 149 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHS---FPGLIALRFLLGL-FES 149 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHH-Hhc
Confidence 455666677899999999999999999999999999999999888888888878777888 8999999999999 788
Q ss_pred hHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH----------hhhHHHHHHHHHHHHHHHHHHHHhccC
Q 018388 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----------LSTTSAFQAATIVSMLAAAYMRVFLKD 193 (357)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~----------l~~~~~f~~~~~~~~~~~~~~~~~~~e 193 (357)
..+|....+++.++.++||++.++++.+..++|.++|++++.. .||||.|++.+++.++..+..++++|+
T Consensus 150 ~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 150 GGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred ccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecC
Confidence 8889999999999999999999999999999999999988766 289999999999999999888999999
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhh
Q 018388 194 DVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL 273 (357)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (357)
.|.+..-..|.++... .+ +.++. + +....++ .++++..+ ..++|.+|...+..++.....++..+|+|.|+
T Consensus 230 ~P~~~~fl~~~ek~~~--~~--~~~~~--~-~~~~~~~-~~~~~~~~-a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l 300 (495)
T KOG2533|consen 230 NPSKAWFLTDEEKELV--VE--RLRES--P-SGGIENK-FKWKGFKE-ALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYL 300 (495)
T ss_pred ChhhccccchHHHHHH--HH--HHHhc--c-CCCcccc-cCHHHHHH-HHhchhHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 8875422211111100 00 00000 0 0010111 23344333 44599999999999999999999999999999
Q ss_pred hhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhc----cchhHHHHHHHHHH-HHHHHHHHhcC
Q 018388 274 KAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGEAKLLSLGLFAA-CINMFICSISW 334 (357)
Q Consensus 274 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~-~i~~~~~~~~~ 334 (357)
++..|++..++..+.....++++++. +++++++|| ..+|........+. .++...+....
T Consensus 301 ~~~~~~s~~~a~~ls~~~~~~g~v~~-i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~ 365 (495)
T KOG2533|consen 301 KSNGGYSELQANLLSTPYDVGGIVGL-ILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAA 365 (495)
T ss_pred HcCCCcChHHhccccchHHhhhHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99657999999999999999999988 999999999 55565555444443 33434444443
No 83
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.92 E-value=2.7e-22 Score=180.15 Aligned_cols=276 Identities=13% Similarity=0.091 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCc-chhhhHHHHH
Q 018388 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR-KAMLTLPLTL 90 (357)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Gr-k~~l~~~~~~ 90 (357)
.+.+..++.....++..|.++.++.+ +.+.+..+.|++.+++.++..++++++|+++||+|| |+++.++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~ 78 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSK-------TLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFA 78 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 45667788888889998999988865 456777889999999999999999999999999965 7788888888
Q ss_pred HHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHh--------hCCCccchhHHHHHHHHHHHHHHHhhHh
Q 018388 91 SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVA--------DNISERQRASAFGILLGVLSASFVCGTL 162 (357)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (357)
..+...+..+.++ ++.+++.|++.|+ ..+...+...++.. |......|.|..| .+|..+||.
T Consensus 79 ~~~~~~~~~~~~~---~~~~~~~~~l~~~-~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~ 148 (418)
T TIGR00889 79 GALLLFFAAQVTT---PAGMFPVLLANSL-AYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMW 148 (418)
T ss_pred HHHHHHHHHHhcC---HHHHHHHHHHHHH-HHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHH
Confidence 8888888888888 8888889999888 54555555555432 3233344555555 367888888
Q ss_pred hhHHhhh---HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHH
Q 018388 163 AARFLST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (357)
Q Consensus 163 ~~~~l~~---~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (357)
+++.++. +.+|++.+++.++..++ .+.+||+++.++++ + ...++..+ .+ .
T Consensus 149 l~g~l~~~~~~~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~-------------------~-----~~~~~~~~-~~-~ 201 (418)
T TIGR00889 149 AVSLLDIELSNIQLYITAGSSALLGVF-ALTLPDIPVAKSTA-------------------K-----MSIKVMLG-LD-A 201 (418)
T ss_pred HHHHhcccchhHHHHHHHHHHHHHHHH-HhcCCCCCCCcccc-------------------c-----cCHHHHhh-hh-H
Confidence 8877632 23466666665555443 45677764322111 0 00000000 11 1
Q ss_pred HhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCc--------chHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 018388 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNK--------NQFADLMLIAGLAGTISQLLFMPLLAPILG 311 (357)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 311 (357)
+..+|+|+++...+..++..........+.+.|.++. |.++ ...+...+...+..+++. +..+++.||+|
T Consensus 202 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~-~~~g~l~dr~g 279 (418)
T TIGR00889 202 FILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEF-GRNPEFADSFVVKNASIWMSLSQFSEIFFI-LTIPFFLKRFG 279 (418)
T ss_pred HHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHh-cccccccchhhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHhC
Confidence 2245678887777777777666666778888888775 5443 556888888888888888 88899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhc
Q 018388 312 EAKLLSLGLFAACINMFICSIS 333 (357)
Q Consensus 312 ~~~~~~~~~~~~~i~~~~~~~~ 333 (357)
+|+++..+.++..++..++...
T Consensus 280 ~r~~l~~~~~~~~v~~~l~~~~ 301 (418)
T TIGR00889 280 IKKVMLLSLVAWALRFGFFAYG 301 (418)
T ss_pred cHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999888887666663
No 84
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.92 E-value=8.8e-23 Score=185.28 Aligned_cols=298 Identities=15% Similarity=0.089 Sum_probs=209.0
Q ss_pred HHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh----cCcch-hhhHHHHHHH
Q 018388 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKA-MLTLPLTLSI 92 (357)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr----~Grk~-~l~~~~~~~~ 92 (357)
+.......+..+.++.+..+ +.+++..+.|++.++..+...+..|+.|+++|| +|||| .++.+....+
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~-------~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~ 81 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTD-------VLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFS 81 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------ccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHH
Confidence 33445556666677777764 567788899999999999999999999999998 68755 5667778888
Q ss_pred HHHHHHHHccchh---HHHHHHHHHHHhhhcccchHHHHHHHHHhhCC-CccchhHHHHHHHHHHHHHHHhhHhhhH---
Q 018388 93 IPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTLAAR--- 165 (357)
Q Consensus 93 ~~~~~~~~~~~~~---~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~--- 165 (357)
++..++...++.. ..+.+++.+++.++ +.+...+...++..|.. +++||++..++.+....+|..+++.+.+
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~ 160 (437)
T TIGR00792 82 IVLVLLFTTPDFSATGKLVYAYITYILLGL-FYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLV 160 (437)
T ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHHH-HHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877777766421 24566777788787 54555566778888887 4689999999988888887665543322
Q ss_pred --------HhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHH
Q 018388 166 --------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (357)
Q Consensus 166 --------~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (357)
..+||+.+.+.+++..+..+..++..||++++.+++ ++++.+.++
T Consensus 161 ~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~---------------------------~~~~~~~~~ 213 (437)
T TIGR00792 161 SYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN---------------------------IEKKLSLKQ 213 (437)
T ss_pred HHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc---------------------------cccCCCHHH
Confidence 237999999888887777666666677654211110 001113344
Q ss_pred HHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHH
Q 018388 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (357)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (357)
..+.++++|.++...+..++..........+.+.|.++.++ ++...+.+.....+..+++. ++.+++.||+|+|+.+.
T Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~g~~~~~~ 291 (437)
T TIGR00792 214 IFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGV-LLFPRLVKKFGRKILFA 291 (437)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHH
Confidence 45556778888888888887777777766677777777666 45566777777778878877 78899999999999999
Q ss_pred HHHHHHHHHHHHHHhcCc-chHHHH-HHHHHHhhhcc
Q 018388 318 LGLFAACINMFICSISWS-AWVPYA-TTAFSVLVVFA 352 (357)
Q Consensus 318 ~~~~~~~i~~~~~~~~~~-~~~~~~-~~~~~~~~~~~ 352 (357)
.+..+..++.+.+.+.++ .+.... ..+.+++.+..
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 328 (437)
T TIGR00792 292 GGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFV 328 (437)
T ss_pred HHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHH
Confidence 998888888776666443 232222 33445555443
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.92 E-value=6.3e-22 Score=180.19 Aligned_cols=339 Identities=10% Similarity=0.001 Sum_probs=223.1
Q ss_pred chhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-cCcchh
Q 018388 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAM 83 (357)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~Grk~~ 83 (357)
++++.++.+.+..+...++.....+.+|.|+++. .+++.+..+.|++.+.+.++..++.+++|+++|| +|||++
T Consensus 7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~-----~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~ 81 (475)
T TIGR00924 7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQ-----AGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT 81 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH
Confidence 3466788888899999999999999999998642 1367777889999999999999999999999999 899999
Q ss_pred hhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccc---hhHHHHHHHHHHHHHHHhh
Q 018388 84 LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ---RASAFGILLGVLSASFVCG 160 (357)
Q Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g 160 (357)
+..+.++.+++.++.+++++ .+.++++|.+.|+ +.|...+...++++|++|+++ |+++.++.....++|..+|
T Consensus 82 l~~~~~~~~~g~~~~~~~~~---~~~~~~~~~l~g~-g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig 157 (475)
T TIGR00924 82 MVLGGIVLMLGHFMLAMSIY---PDLIFYGLGTIAV-GSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFIS 157 (475)
T ss_pred HHHHHHHHHHHHHHHHhccc---HhHHHHHHHHHHh-ccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHH
Confidence 99999999999999999888 7778889999999 777777899999999998754 8889999999999999999
Q ss_pred HhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC---CCcccccccc------------cccccCCCC
Q 018388 161 TLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDD---LTRPIITEET------------EGVNQNESN 221 (357)
Q Consensus 161 ~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~~------------~~~~~~~~~ 221 (357)
|.+++++ +|++.|.+.++..++.. +.+...++..++.+++. +.++...... .......+.
T Consensus 158 ~~l~g~l~~~~g~~~~f~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (475)
T TIGR00924 158 PLLAGVIAENYGYHVGFNLAAVGMVIGL-LTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHV 236 (475)
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHH-HHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9998875 89999998876544433 33333333221111100 0000000000 000000000
Q ss_pred CCCCcc-------------ccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcch----H
Q 018388 222 SPVKIP-------------VCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQ----F 284 (357)
Q Consensus 222 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~ 284 (357)
...... ....++...+ ..-.|...+..+++...+.+..+....+.++.+.++..+.+... .
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~ 314 (475)
T TIGR00924 237 VIANILLMTVTLAVIIFFFRLAFKPRLDA--VARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPV 314 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCH--HHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECH
Confidence 000000 0000000000 00011123444555566666777777787888887754444222 5
Q ss_pred HHHHHHHHHHHHHHHHHHHh---hhhhc-cchhHHH--HHHHHHHHHHHHHHHh---------cCcchHHHH-HHHHHHh
Q 018388 285 ADLMLIAGLAGTISQLLFMP---LLAPI-LGEAKLL--SLGLFAACINMFICSI---------SWSAWVPYA-TTAFSVL 348 (357)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~---~l~~~-~~~~~~~--~~~~~~~~i~~~~~~~---------~~~~~~~~~-~~~~~~~ 348 (357)
+.+.+..++..++.++++.. ++.|| .+++... .+|.++.++++..+.+ ..+.+.... ..+.++|
T Consensus 315 ~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~g 394 (475)
T TIGR00924 315 IWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLG 394 (475)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH
Confidence 78888888888887744432 34443 2223333 6788888888777664 234444444 5677888
Q ss_pred hhccccc
Q 018388 349 VVFATPS 355 (357)
Q Consensus 349 ~~~~~p~ 355 (357)
..+..|+
T Consensus 395 e~~~~p~ 401 (475)
T TIGR00924 395 ELMISPL 401 (475)
T ss_pred HHHHhHH
Confidence 8887775
No 86
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.91 E-value=4.7e-23 Score=189.90 Aligned_cols=299 Identities=17% Similarity=0.120 Sum_probs=204.7
Q ss_pred HhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccch
Q 018388 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI 104 (357)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~ 104 (357)
+...+..+.+.++.. ....+.+....+.+++.+...++..+++++.|+++|++|||+.++++.+...++.+++++++|
T Consensus 64 g~~s~~~~~~~~~~~-~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~- 141 (513)
T KOG0254|consen 64 GGISGALDFLQRFAS-LYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPS- 141 (513)
T ss_pred ccchhhHHHHHhccc-ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhh-
Confidence 455566665554321 111111111146699999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-----hhHHHHHHHHHH
Q 018388 105 SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAATIV 179 (357)
Q Consensus 105 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-----~~~~~f~~~~~~ 179 (357)
++.++++|+++|+ +.|........+++|..|++.||...+..+....+|..++..++... +||..+.+..+.
T Consensus 142 --~~~l~~GR~l~G~-g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~ 218 (513)
T KOG0254|consen 142 --WYQLIVGRILTGL-GVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIP 218 (513)
T ss_pred --HHHHHHHHHHhcc-chhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHH
Confidence 9999999999999 77777789999999999999999999999999999999997777665 699999998888
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCccc---ccccccccccCCCCCC-------CCccccccch-hHHHHHHhhhcccch
Q 018388 180 SMLAAAYMRVFLKDDVPNDDDDDLTRPI---ITEETEGVNQNESNSP-------VKIPVCKKIP-SIRDLICLLRSSVTL 248 (357)
Q Consensus 180 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~ 248 (357)
+++..+. .+++||+|++.-++.+.+++ ........+++.+.+. ..+....+.+ .+++..+...+++..
T Consensus 219 ~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 297 (513)
T KOG0254|consen 219 AVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLI 297 (513)
T ss_pred HHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHH
Confidence 7777666 78899998864433222211 1111110000000000 0000000000 122222111112223
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHH
Q 018388 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 328 (357)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ 328 (357)
....+..+.+..+......+.+.+++.. |.+... .......++...++. ++..++.||.|||+.++.+...+.++.+
T Consensus 298 i~~~l~~fqq~tG~~~~~~Y~~~if~~~-g~~~~~-~~~~~~~~~v~~~~t-~~~~~lvd~~gRr~lll~s~~~m~~~~~ 374 (513)
T KOG0254|consen 298 IGLLLQLFQQLTGINYVFYYSTTIFKSA-GLKSDT-FLASIILGVVNFLGT-LVATYLVDRFGRRKLLLFGAAGMSICLV 374 (513)
T ss_pred HHHHHHHHHHHhCCceEEeehHHHHHhc-CCCCch-HHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHhHHHHHHHHH
Confidence 3344444445455556677777777665 766544 444555566666666 6768999999999999999999999987
Q ss_pred HHHh
Q 018388 329 ICSI 332 (357)
Q Consensus 329 ~~~~ 332 (357)
+++.
T Consensus 375 ~~~~ 378 (513)
T KOG0254|consen 375 ILAV 378 (513)
T ss_pred HHHH
Confidence 7664
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.91 E-value=1.4e-21 Score=177.97 Aligned_cols=341 Identities=10% Similarity=0.043 Sum_probs=209.1
Q ss_pred CccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-cCc
Q 018388 2 GMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGR 80 (357)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~Gr 80 (357)
++++.+|.++.++...+...++.....+.++.|+++. ++.+....+++.+.+.....+..++.|+++|| +||
T Consensus 8 ~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~-------lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~ 80 (489)
T PRK10207 8 GLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQ-------LGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGT 80 (489)
T ss_pred chhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccch
Confidence 3444567788888888999999999999999998763 44455566888888888888888999999999 999
Q ss_pred chhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCcc--chhHHHHHHHHHHHHHHH
Q 018388 81 KAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER--QRASAFGILLGVLSASFV 158 (357)
Q Consensus 81 k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~ 158 (357)
||+++.+.++..++++.++++++. ...++++|.++|+ +.|...|...+++.|.+|++ +|+++++++....++|..
T Consensus 81 r~~~~~g~~~~~~g~~~~~~~~~~--~~ll~~~~~l~~i-g~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~ 157 (489)
T PRK10207 81 KRTIVLGAIVLAIGYFMTGMSLLK--PDLIFIALGTIAV-GNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSL 157 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc--hhHHHHHHHHHHh-ccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHH
Confidence 999999999999999999988762 2235578999999 77888889999999999877 457789999999999999
Q ss_pred hhHhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCC-----CCCCCCcccccccc------cccccCCCCCC
Q 018388 159 CGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPND-----DDDDLTRPIITEET------EGVNQNESNSP 223 (357)
Q Consensus 159 ~g~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~-----~~~~~~~~~~~~~~------~~~~~~~~~~~ 223 (357)
+||.+++++ |||+.|++.++. .+..++.+...++..++. +++.|..+...... -......+...
T Consensus 158 ~g~~l~g~l~~~~gw~~~F~i~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~ 236 (489)
T PRK10207 158 ISLSLAPVIADKFGYSVTYNLCGAG-LIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVE 236 (489)
T ss_pred HHHHHHHHHHHhhChHHHHHHHHHH-HHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhh
Confidence 998888775 899999986543 443343333334322111 11112222110000 00000000000
Q ss_pred CCcccccc---------chhHHHHHHhhhcccchHHHH--HHHHHHHHhhhhhhHHHHHhhhhhcccCc----chHHHHH
Q 018388 224 VKIPVCKK---------IPSIRDLICLLRSSVTLSQAA--VVAFFSGLSEGGMQASFLYFLKAQFHFNK----NQFADLM 288 (357)
Q Consensus 224 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~ 288 (357)
........ ....++..+ ..|+|.+.... +...+.+..+....+.++.|.++..+.+. ...+.+.
T Consensus 237 ~~~~~~~~~~~i~~~~f~~~~~~~~~-~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~ 315 (489)
T PRK10207 237 VANLVLIVLSIVVTIIFFREAFKLDK-TGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQ 315 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHH
Confidence 00000000 000000001 12233333222 22444455555556777888875323211 0124444
Q ss_pred HHHHHHHHHHHHHHHhhhhhccchhH-------HHHHHHHHHHHHHHHHH-----hc-----CcchHHHH-HHHHHHhhh
Q 018388 289 LIAGLAGTISQLLFMPLLAPILGEAK-------LLSLGLFAACINMFICS-----IS-----WSAWVPYA-TTAFSVLVV 350 (357)
Q Consensus 289 ~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~i~~~~~~-----~~-----~~~~~~~~-~~~~~~~~~ 350 (357)
+...+..++.. .+.+++.||.++|+ -+..|+++.+++++.+. .. .+.+.... ..+.++|.+
T Consensus 316 ~~n~~~iii~~-pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~ 394 (489)
T PRK10207 316 ALNPFWVVVAS-PILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGEL 394 (489)
T ss_pred hHhHHHHHHHH-HHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 55555555666 55678999998876 36677777777764331 21 12232222 456688887
Q ss_pred ccccc
Q 018388 351 FATPS 355 (357)
Q Consensus 351 ~~~p~ 355 (357)
+..|.
T Consensus 395 ~~~~~ 399 (489)
T PRK10207 395 FISAL 399 (489)
T ss_pred HHhHH
Confidence 77664
No 88
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.90 E-value=1e-20 Score=169.11 Aligned_cols=275 Identities=14% Similarity=0.075 Sum_probs=190.3
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHH--HHHHHHHHHHHHHhhhh-hhhhcCcchhhhH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQ--QAIIGLGTLVMMPVIGN-LSDQYGRKAMLTL 86 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~~~~~~~~~i~~~~~G~-l~dr~Grk~~l~~ 86 (357)
+..+....+..++..++..|.+|.+++| .+.+..+.|+. .++..+...+.+|++++ ..||+||||.+++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~--------~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~ 74 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE--------DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVL 74 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHH
Confidence 4456667788888889999999999985 25666778886 46778888899999955 7999999999766
Q ss_pred HHHHH-HHHHHHHH-HccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhh
Q 018388 87 PLTLS-IIPLAILA-YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (357)
Q Consensus 87 ~~~~~-~~~~~~~~-~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 164 (357)
...+. ........ +........+++....+.++ ..+...+...++..|..++++++...+....+..+|..+|+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~ 153 (390)
T TIGR02718 75 PMQCLVSACLASLALVGPDVAGAGWAVGLLACASL-ASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGT 153 (390)
T ss_pred HHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 55332 22222222 21111112233444444555 45566677888888888888888888888888888988888655
Q ss_pred HH----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHH
Q 018388 165 RF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (357)
Q Consensus 165 ~~----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (357)
++ .+||.+|++.+++..+..+..++ .+|++++++++ +.+ ..++..+
T Consensus 154 ~~l~~~~gw~~~f~~~a~l~~~~~~~~~~-~~~~~~~~~~~--------------------------~~~---~~~~~~~ 203 (390)
T TIGR02718 154 LVLFGKFGQRPAFLLVACVPLASLVCVLW-LKDRAVASPEA--------------------------PLA---RRASLFR 203 (390)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHH-cCCCCcCcccc--------------------------chh---hHHHHHH
Confidence 44 59999999998887666555444 33332211110 000 1122223
Q ss_pred hhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHH
Q 018388 241 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 320 (357)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 320 (357)
+.|+|.++......++..........+.+.|++|. |++++++|......+....+.+.++.+++.||+++|+.+..+.
T Consensus 204 -~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~ 281 (390)
T TIGR02718 204 -FFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDA-GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGV 281 (390)
T ss_pred -HHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhc-CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 44577777777777888787888888999999985 9999999999888876555444388899999999999888777
Q ss_pred HHHHH
Q 018388 321 FAACI 325 (357)
Q Consensus 321 ~~~~i 325 (357)
.+.++
T Consensus 282 ~~~~~ 286 (390)
T TIGR02718 282 GLAGS 286 (390)
T ss_pred HHHHH
Confidence 66533
No 89
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.90 E-value=1.1e-20 Score=164.94 Aligned_cols=297 Identities=11% Similarity=0.029 Sum_probs=194.2
Q ss_pred cchhHHHH-HHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccc
Q 018388 45 ECSLAIYL-SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEG 123 (357)
Q Consensus 45 ~~~~s~~~-~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 123 (357)
+.+++..+ .|.+.+++..+++++.++.|+++||+|.|+++..+.+.+++.+++.+++++ +..+.+.|++.|+ +.|
T Consensus 55 elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S---l~~L~i~R~llGv-aEA 130 (511)
T TIGR00806 55 VLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS---VWHMQLMEVFYSV-TMA 130 (511)
T ss_pred HcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH-HHH
Confidence 55666777 899999999999999999999999999999999999999999999999999 9999999999999 888
Q ss_pred hHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh---hhHHHHHHHH--HHHHHHHHHHHHhccCCCCCC
Q 018388 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL---STTSAFQAAT--IVSMLAAAYMRVFLKDDVPND 198 (357)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l---~~~~~f~~~~--~~~~~~~~~~~~~~~e~~~~~ 198 (357)
... +...++.+++|+++|+++.++...+..+|.++++++++.+ +||+-..+.- ..+....++..+++|..++..
T Consensus 131 ~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl 209 (511)
T TIGR00806 131 ARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSL 209 (511)
T ss_pred HHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhh
Confidence 887 9999999999999999999999999999999999888875 7876444331 222333344456788554421
Q ss_pred --CCCCCCcccccccccccccCCCCCCCCcc-c-cccchhHHHHHH---hhhcccchHHHHHHHHHHHHhhhhhhHHHHH
Q 018388 199 --DDDDLTRPIITEETEGVNQNESNSPVKIP-V-CKKIPSIRDLIC---LLRSSVTLSQAAVVAFFSGLSEGGMQASFLY 271 (357)
Q Consensus 199 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
+++.+.++... .+.+....++.+.... . .......+..++ ...+|+.+....+=..+...++..+.++...
T Consensus 210 ~f~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~ 287 (511)
T TIGR00806 210 FFNRLEDVRGALP--CELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHT 287 (511)
T ss_pred hhccccccccccc--cccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHH
Confidence 11100000000 0000000000000000 0 011111122221 2234666655555555555566666666655
Q ss_pred hhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchh--HHHHHHHHHHHHHHHHHHhcCcchHHHHH-HHHHHh
Q 018388 272 FLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA--KLLSLGLFAACINMFICSISWSAWVPYAT-TAFSVL 348 (357)
Q Consensus 272 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~ 348 (357)
.-++..+-++...|..-++....+.+.. +..|++..+..+. ..+.+..++.+..++++..+++.|..+.. +++...
T Consensus 288 LW~~v~~~~~~yNG~veA~~tllga~~a-~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~ 366 (511)
T TIGR00806 288 LWGTLDESLNKYNGAVDAASTLLGAITS-FIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGI 366 (511)
T ss_pred HHHHcCCCccccCCHHHHHHHHHHHHHH-HHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHH
Confidence 5554423222255788888888888888 8888886665442 23334444445556677778888887774 444433
Q ss_pred h
Q 018388 349 V 349 (357)
Q Consensus 349 ~ 349 (357)
.
T Consensus 367 y 367 (511)
T TIGR00806 367 Y 367 (511)
T ss_pred H
Confidence 3
No 90
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=1.5e-21 Score=180.77 Aligned_cols=279 Identities=19% Similarity=0.131 Sum_probs=193.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchH
Q 018388 46 CSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSI 125 (357)
Q Consensus 46 ~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 125 (357)
...+.....+..+++.+|.++|++++|.++||+|||++++.+.++..++.+..++++| ++.+++.|++.|+ +.+..
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~---~~~~~~~Rfl~G~-~~~~~ 188 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPN---YWMFLIFRFLSGF-FGSGP 188 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCc---HHHHHHHHHHHHh-hccch
Confidence 3445677789999999999999999999999999999999999999999999999999 9999999999999 55666
Q ss_pred HHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh--hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 018388 126 NCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDL 203 (357)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l--~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 203 (357)
......++.|++++++|+.+..+ ......+..++|..++++ +||+.+++..+...+..++ ++..||++++...+.+
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~ 266 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGR 266 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCc
Confidence 68999999999999999999999 666666677777776665 7999999998887776555 5666799987655444
Q ss_pred CcccccccccccccC--CCCCC--C----Ccccccc--chhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhh
Q 018388 204 TRPIITEETEGVNQN--ESNSP--V----KIPVCKK--IPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL 273 (357)
Q Consensus 204 ~~~~~~~~~~~~~~~--~~~~~--~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (357)
.+++.+..++..+.+ ..+.. . ...+.+. .++. .....+.+.+++....+...+.++.....+.-++...
T Consensus 267 ~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~ 345 (521)
T KOG0255|consen 267 IDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPK-ISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNV 345 (521)
T ss_pred hHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCC-CchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhh
Confidence 433322222111110 00000 0 0000000 0000 1122234455566656555555544444444444444
Q ss_pred hhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcc
Q 018388 274 KAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSA 336 (357)
Q Consensus 274 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 336 (357)
.. +|.+. .......+....... ...+...|+.|||.....+..+..++++...+....
T Consensus 346 ~~-lg~~~---~~~~~~~~~~~~p~~-~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~ 403 (521)
T KOG0255|consen 346 SG-LGGNI---YLNFTLSGLVELPAY-FRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDD 403 (521)
T ss_pred hh-cCchH---HHHHHHHHHHHhhHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 43 24333 344444444555544 666788999999999999999999999888876543
No 91
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.89 E-value=4.8e-20 Score=164.95 Aligned_cols=299 Identities=13% Similarity=0.103 Sum_probs=205.8
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh----hcCcchh
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGRKAM 83 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~d----r~Grk~~ 83 (357)
.++..+....+-..++.....+.++.|.++ .+.+....+++..+..+...+.+|+.|+++| |+||||+
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl~~--------lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp 75 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYVQE--------LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP 75 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH
Confidence 345566666677788888888888888753 4556678899999999999999999999999 5999999
Q ss_pred hhHH-HHHHHHHHHHHHHccchhH--------------HHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccch--hHHH
Q 018388 84 LTLP-LTLSIIPLAILAYRRSISF--------------FYAYYALRTLTAMVCEGSINCLALAYVADNISERQR--ASAF 146 (357)
Q Consensus 84 l~~~-~~~~~~~~~~~~~~~~~~~--------------~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r--~~~~ 146 (357)
++.. .+...++..+.+++++... .+..+++-.+..+ +.....+...++++|.+|+++| +.+.
T Consensus 76 ~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~-~~n~~~~p~rALiaDl~p~~~~~~~~a~ 154 (477)
T TIGR01301 76 FIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDV-ANNMLQGPCRAFLADLTGGDARRTRIAN 154 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHhcccccCchhHHHHHHH
Confidence 8875 5566666677777665210 0222333333344 4455667889999999998865 5799
Q ss_pred HHHHHHHHHHHHhhHhhhHHh-------------------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCccc
Q 018388 147 GILLGVLSASFVCGTLAARFL-------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPI 207 (357)
Q Consensus 147 ~~~~~~~~~g~~~g~~~~~~l-------------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 207 (357)
++.+...++|.++|+.++++. +.|..|++.+++.++..+...+..||.+..++++.+.+
T Consensus 155 ~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~-- 232 (477)
T TIGR01301 155 AYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS-- 232 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh--
Confidence 999999999999999988764 33678888888877877888888888764322210000
Q ss_pred ccccccccccCCCCCCCCccccccchhHHHHHHhhhc-ccchHHHHHHHHHHHHhhhhhhHHHHHhhh-hhcccCcch--
Q 018388 208 ITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS-SVTLSQAAVVAFFSGLSEGGMQASFLYFLK-AQFHFNKNQ-- 283 (357)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~-- 283 (357)
+ .++. ++.+....+++.++.+++ +|.++.+++..++.+++...+..+.+.|+. +.++-++.+
T Consensus 233 --------~---~~~~---~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~ 298 (477)
T TIGR01301 233 --------E---AAPP---SKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGA 298 (477)
T ss_pred --------h---cccc---cccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchh
Confidence 0 0000 000111234555555443 677899999999999999999888888775 456544321
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHhhhhhccch-hHHHHHHHHHHHHHHHHHHh
Q 018388 284 --------FADLMLIAGLAGTISQLLFMPLLAPILGE-AKLLSLGLFAACINMFICSI 332 (357)
Q Consensus 284 --------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~~~~~ 332 (357)
-.+.....++...+.+ ++..++.+|+|+ |+....+.++.++++....+
T Consensus 299 ~y~~gvr~G~~~l~~~s~~~~i~s-~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~ 355 (477)
T TIGR01301 299 KYDDGVRAGAFGLMLNSVVLGITS-IGMEKLCRGWGAGKRLWGIVNIILAICLAATVL 355 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH
Confidence 1122334444444555 566888999985 67778888888888776654
No 92
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.88 E-value=7.9e-20 Score=165.88 Aligned_cols=293 Identities=14% Similarity=0.096 Sum_probs=193.8
Q ss_pred HHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccc
Q 018388 24 TMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRS 103 (357)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~ 103 (357)
.......++.+..|. ++++ ...|+.+...++..+..++.|+++|.+|||..++.+.++..+|.++++-++|
T Consensus 60 ~~~~a~~l~~I~~di-G~~~--------~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~ 130 (599)
T PF06609_consen 60 LVLPASILPYINADI-GGSD--------NWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQN 130 (599)
T ss_pred HhccHHHHHHHHHhc-CCCc--------cchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCc
Confidence 333345566655543 2221 1266777789999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHH
Q 018388 104 ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIV 179 (357)
Q Consensus 104 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~ 179 (357)
...++++..+.|+ +.|... .....++|..|.|.|....+............+|.++..+ +|||.|++..+.
T Consensus 131 ---~~~~iag~~l~Gv-gaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~ 205 (599)
T PF06609_consen 131 ---MNTFIAGMVLYGV-GAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIW 205 (599)
T ss_pred ---HHHHHHHHHHHHH-hhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHH
Confidence 8888999999999 666664 5667789999999998888777766666566777777654 799999999888
Q ss_pred HHHHHHHHHHh-ccCCCCCCCC-CCCCcccccc-c-------------------ccccc-cCCCCCCCC-----------
Q 018388 180 SMLAAAYMRVF-LKDDVPNDDD-DDLTRPIITE-E-------------------TEGVN-QNESNSPVK----------- 225 (357)
Q Consensus 180 ~~~~~~~~~~~-~~e~~~~~~~-~~~~~~~~~~-~-------------------~~~~~-~~~~~~~~~----------- 225 (357)
..+.++...++ .|++.+..+. +..+.+..++ + -.... ..+.....-
T Consensus 206 ~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv 285 (599)
T PF06609_consen 206 SGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLV 285 (599)
T ss_pred HHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHH
Confidence 77666554443 3433221111 1100010000 0 01110 111111100
Q ss_pred -----ccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcc---hHHHHHHHHHHHHHH
Q 018388 226 -----IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN---QFADLMLIAGLAGTI 297 (357)
Q Consensus 226 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~ 297 (357)
+.....++++.+ .++++++|.+...+++.++..+.+.....+.|......++-++. +.++.....+.+..+
T Consensus 286 ~F~~wE~~~~~~~Pl~P-~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~ 364 (599)
T PF06609_consen 286 AFVVWEWFGAPKDPLFP-HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCA 364 (599)
T ss_pred HHHHhhhhccCCCCcCC-HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHH
Confidence 111111223322 23344346676667777888878888888889888877766653 457777777777777
Q ss_pred HHHHHHhhhhhccch-hHHHHHHHHHHHHHHHHHHh
Q 018388 298 SQLLFMPLLAPILGE-AKLLSLGLFAACINMFICSI 332 (357)
Q Consensus 298 ~~~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~~~~~ 332 (357)
+. ++.+.+..+.++ |+.++++..+..+++.+++.
T Consensus 365 g~-~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~ 399 (599)
T PF06609_consen 365 GA-VILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAA 399 (599)
T ss_pred HH-HHHHHHHHHccchhHHHHHHHHHHHHHHHHHHH
Confidence 77 666788877776 66677787777766655554
No 93
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.88 E-value=7.2e-20 Score=152.40 Aligned_cols=295 Identities=16% Similarity=0.153 Sum_probs=227.1
Q ss_pred hHHHHHHHHHHHHH----HhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 11 SHLFVTVFLWGFAT----MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 11 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
+.......+..++. ..+.|.++.+. ++.++|....|+++++..+...+.+|+..+++.|+|.++.+..
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir--------~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~ 82 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIR--------QDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFL 82 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHH--------HHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHH
Confidence 34444444444443 34455555553 4678888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhh--
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA-- 164 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~-- 164 (357)
++++..++.++-... + .+.++.+..+.|. +.+.......+++-+.+| |+-+..++.+....++|..+++.+.
T Consensus 83 ~Llli~~G~~iR~~~-~---~~~L~~gt~l~G~-gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavp 156 (395)
T COG2807 83 ALLLIAAGILIRSLG-G---LPLLFLGTLLAGA-GIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVP 156 (395)
T ss_pred HHHHHHHHHHHHhcc-c---HHHHHHHHHHHHh-hHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhH
Confidence 999999999988776 4 6778899999998 878888889999999988 6778999999999999888776554
Q ss_pred --HHh-hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHh
Q 018388 165 --RFL-STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241 (357)
Q Consensus 165 --~~l-~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (357)
... +||.....-+..+++.++. | +|...+++..+ ...+..+..+
T Consensus 157 la~~~~gW~~aL~~WAl~allAl~~-W--lPq~~r~~~~~--------------------------~~~~~~~~~~---- 203 (395)
T COG2807 157 LAQHSGGWRGALGFWALLALLALLI-W--LPQALREQAAS--------------------------IATKLVSVRK---- 203 (395)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHH-H--hhhcccccccc--------------------------cccccccccc----
Confidence 333 7999888888886665443 2 35432221110 0000001112
Q ss_pred hhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccc-hhHHHHHHH
Q 018388 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG-EAKLLSLGL 320 (357)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~ 320 (357)
++++|.-|...+...++++.++....|+|.++.|+ |+|+++.|.+.+...+.....+ +..+.+.+|.. +|+......
T Consensus 204 vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~-G~sa~~aG~llsl~~l~~~~~~-ll~P~la~R~~n~r~~~~~~~ 281 (395)
T COG2807 204 VWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDR-GLSAAEAGSLLSLMQLAQLPTA-LLIPLLARRSKNQRPLVVLAL 281 (395)
T ss_pred cccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHc-CCCHHHhhhHHHHHHHHHHHHH-HHHHHHHHHhcccchHHHHHH
Confidence 45689999999999999999999999999999998 9999999999999999999998 88899998654 566777777
Q ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHhhhcccc
Q 018388 321 FAACINMFICSISWSAWVPYATTAFSVLVVFATP 354 (357)
Q Consensus 321 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 354 (357)
..+.++..-+.+.+.....+...++|.|.|..+|
T Consensus 282 ~~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~ 315 (395)
T COG2807 282 LLMLVGLVGLLLAPGQLPILWALLLGLGQGGAFP 315 (395)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhCccchHHH
Confidence 7788887777777665544446778888777665
No 94
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.88 E-value=6.9e-20 Score=167.42 Aligned_cols=284 Identities=12% Similarity=0.062 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh----hcCcch-hhhH
Q 018388 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGRKA-MLTL 86 (357)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~d----r~Grk~-~l~~ 86 (357)
...++.+...+......+.++.|..+ ..+++....|.+..+..+...+..|++|.++| |+|||| .++.
T Consensus 10 ~yg~g~~~~~~~~~~~~~~l~~yyt~-------v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~ 82 (473)
T PRK10429 10 SYGFGAFGKDFAIGIVYMYLMYYYTD-------VVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILI 82 (473)
T ss_pred hhccchhHHhHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhh
Confidence 34455566667777778888888765 45777889999999999999999999999999 669955 4556
Q ss_pred HHHHHHHHHHHHHHccch---hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCC-CccchhHHHHHHHHHHHHHHHhhHh
Q 018388 87 PLTLSIIPLAILAYRRSI---SFFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTL 162 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (357)
+.+..+++..++...++. ..+.++++..++.++ +.....+...++..|.. +++||.+..++.....++|..+++.
T Consensus 83 g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~-~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~ 161 (473)
T PRK10429 83 GTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGM-TYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAG 161 (473)
T ss_pred hhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHH-HHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777776555443321 123345555556565 44555567888999998 5899999998877777776555443
Q ss_pred hhHH----h-------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCcccccc
Q 018388 163 AARF----L-------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKK 231 (357)
Q Consensus 163 ~~~~----l-------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (357)
+... + +|+....+.+++..+..+..++..||.+++++.+ .++++
T Consensus 162 ~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~-------------------------~~~~~ 216 (473)
T PRK10429 162 FTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQV-------------------------SAEGS 216 (473)
T ss_pred HHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccc-------------------------ccccc
Confidence 3221 1 4555556666655555555555566643221110 00012
Q ss_pred chhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 018388 232 IPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG 311 (357)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 311 (357)
+.+.++.++.+++||.++..++..++............+.|.++..+ +....+.+....++..+++. ++.+++.||+|
T Consensus 217 ~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~g 294 (473)
T PRK10429 217 HLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTL-ILFPRLVKSLS 294 (473)
T ss_pred CCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence 23456666667788888888888888877777777777767776644 45555666676667777777 77899999999
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 018388 312 EAKLLSLGLFAACINMFIC 330 (357)
Q Consensus 312 ~~~~~~~~~~~~~i~~~~~ 330 (357)
+|+.+..+..+..++.+.+
T Consensus 295 kk~~~~~~~~~~~~~~~~~ 313 (473)
T PRK10429 295 RRILWAGASIFPVLSCGVL 313 (473)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 9999888877766555443
No 95
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.87 E-value=2e-19 Score=164.85 Aligned_cols=336 Identities=10% Similarity=0.040 Sum_probs=199.1
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-cCcchhhh
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLT 85 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~Grk~~l~ 85 (357)
++.++.++...+...++.....+.++.|+.+. ++.+....+++.+.+........+++|+++|| +|||+.+.
T Consensus 20 p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~-------lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~ 92 (500)
T PRK09584 20 PKAFYLIFSIELWERFGYYGLQGIMAVYLVKQ-------LGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIM 92 (500)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 44577888888889999888888999998753 34445555666666666656666789999999 59999999
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccc--hhHHHHHHHHHHHHHHHhhHhh
Q 018388 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ--RASAFGILLGVLSASFVCGTLA 163 (357)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~ 163 (357)
.+.++..++..+++++++. .+.+.+.|+++|+ +.|...+...+++.|++|+++ |++++++...+.++|..+||.+
T Consensus 93 ~g~~~~~ig~~l~~~~~~~--~~~l~~~~~l~gi-g~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i 169 (500)
T PRK09584 93 LGAIVLAIGYALVAWSGHD--AGIVYMGMATIAV-GNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLA 169 (500)
T ss_pred HHHHHHHHHHHHHHHhccc--HHHHHHHHHHHHH-hhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHH
Confidence 9999999999888887431 4566788999999 667777888899999998654 4567888899999999999999
Q ss_pred hHHh----hhHHHHHHHHHHHHHHH---HHHHHhccCCCCCCC-CCCCCcccccccc------cccccCCCCCCCCcccc
Q 018388 164 ARFL----STTSAFQAATIVSMLAA---AYMRVFLKDDVPNDD-DDDLTRPIITEET------EGVNQNESNSPVKIPVC 229 (357)
Q Consensus 164 ~~~l----~~~~~f~~~~~~~~~~~---~~~~~~~~e~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 229 (357)
++++ |||+.|++.++...+.. +.....++|..++.+ ++.|..+...... ........+.+......
T Consensus 170 ~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (500)
T PRK09584 170 TPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMAL 249 (500)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 9876 89999998875433332 222333444322111 1122211100000 00000000000000000
Q ss_pred -----c-cchhHHHHH--HhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhh----h-----cccCcchHHHHHHHHH
Q 018388 230 -----K-KIPSIRDLI--CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKA----Q-----FHFNKNQFADLMLIAG 292 (357)
Q Consensus 230 -----~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~g~~~~~~~~~~~~~~ 292 (357)
. .....++.. +... +++....+ ..++....+.......|.++.. . .|+.. ..+.+.+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i-~~~~~~s~n~ 326 (500)
T PRK09584 250 GVVALGIVVIFGKEAFAMKGAA-RRKMIVAF-ILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAV-EPEQYQALNP 326 (500)
T ss_pred HHHHHHHHHHHHHHHhhcCHHH-HHHHHHHH-HHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEE-CHHHHHHHhH
Confidence 0 000000000 0011 12222222 2223333444445555554332 1 12221 1466666666
Q ss_pred HHHHHHHHH---HHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCc---------c-hHHHHHHHHHHhhhccccc
Q 018388 293 LAGTISQLL---FMPLLAPILGEAKLLSLGLFAACINMFICSISWS---------A-WVPYATTAFSVLVVFATPS 355 (357)
Q Consensus 293 ~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~p~ 355 (357)
+..++..++ ..+++.||.+..+.+.+|+++.+++++.+....+ . |......+.++|..+..|.
T Consensus 327 i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~ 402 (500)
T PRK09584 327 FWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGL 402 (500)
T ss_pred HHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHH
Confidence 555555522 2355666666777889999999999888766433 2 3333356778888877664
No 96
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.87 E-value=2.5e-20 Score=168.38 Aligned_cols=295 Identities=15% Similarity=0.118 Sum_probs=215.0
Q ss_pred HHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh----hcCcchhhh-HHHHHHHHHHH
Q 018388 22 FATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGRKAMLT-LPLTLSIIPLA 96 (357)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~d----r~Grk~~l~-~~~~~~~~~~~ 96 (357)
+........++.+..+ ..++++...|++..+..+..++..|+.|.++| |+||||.++ .+.+..+++..
T Consensus 15 ~~~~~~~~~~~~f~~~-------~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~ 87 (428)
T PF13347_consen 15 MIWSLLSSYLLYFYTD-------VLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFF 87 (428)
T ss_pred HHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHH
Confidence 3334444455555544 45777888999999999999999999999999 899877655 67777777777
Q ss_pred HHHHc-c-chh---HHHHHHHHHHHhhhcccchHHHHHHHHHhhCCC-ccchhHHHHHHHHHHHHHHHhhHhhhHH----
Q 018388 97 ILAYR-R-SIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCGTLAARF---- 166 (357)
Q Consensus 97 ~~~~~-~-~~~---~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~---- 166 (357)
++... + +.. ...++.+..++..+ +.........++..|..+ +|||.+..+.-+....+|..+.+.+...
T Consensus 88 llf~~~p~~~~~~~~~~~~~~~~~l~~~-~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~ 166 (428)
T PF13347_consen 88 LLFSPPPAGLSFTAKLVWLFVFYILFDI-AYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSW 166 (428)
T ss_pred HhhccccchhhhhhHHHHHHHHHHHHHH-hhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 77665 4 111 13344666666676 556666778899999998 5789999999888888887644433322
Q ss_pred h-------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHH
Q 018388 167 L-------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (357)
Q Consensus 167 l-------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (357)
+ +|++..++.+++..+..+...+..||++++.+++ +++.+.++..
T Consensus 167 ~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~----------------------------~~~~~~~~~~ 218 (428)
T PF13347_consen 167 FGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQ----------------------------EKKISLRDSL 218 (428)
T ss_pred hccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccccc----------------------------ccccccccch
Confidence 2 5888888888887877777777788822211111 1112334445
Q ss_pred HhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Q 018388 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (357)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (357)
+.+++||.++...+..++............+.|.++..|.+ ...+.+.....+...++. ++.+++.||+|+|+....+
T Consensus 219 ~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~-~~~~~l~~r~gk~~~~~~~ 296 (428)
T PF13347_consen 219 RSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGS-PLWGRLSKRFGKKKVYIIG 296 (428)
T ss_pred hhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHH-HHHHHHHHHccceeehhhh
Confidence 55777999999999999998888888889999999988877 455777778888888877 7779999999999999999
Q ss_pred HHHHHHHHHHHHhcC--cchHHHH-HHHHHHhhhcccc
Q 018388 320 LFAACINMFICSISW--SAWVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 320 ~~~~~i~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~p 354 (357)
..+.+++.+.+.+.+ +.+..++ ..+.+++.+..++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~ 334 (428)
T PF13347_consen 297 LLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFV 334 (428)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhccccc
Confidence 999999988777765 5554444 4566777665543
No 97
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.87 E-value=2.1e-25 Score=203.18 Aligned_cols=305 Identities=19% Similarity=0.214 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHHhhHhhHHHHHHH-HhcC--CCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHH
Q 018388 14 FVTVFLWGFATMMVVPAITDVTMM-ALCP--GLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (357)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~ 90 (357)
.++.+..+++...+....+..... .... ...+.+.+..+.++..+...++..+++++.|.++||+|||+.++.+.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 344577777777766665555422 1111 1122222456779999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcc---chhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 91 SIIPLAILAYRR---SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 91 ~~~~~~~~~~~~---~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
..++.++.++++ + ++.+.++|+++|+ +.|...+....++.|..|+++|++..++.+....+|..++..++...
T Consensus 86 ~~i~~~~~~~~~~~~~---~~~~~~~R~~~G~-~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~ 161 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNN---FWMLLIGRFLIGF-GIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV 161 (451)
T ss_pred cccccccccccccccc---ccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999 7 8899999999999 77777789999999999999999999999999999988887665432
Q ss_pred ----h---hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCccccccccc---ccccCCC--C-CCCCccccccchh
Q 018388 168 ----S---TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETE---GVNQNES--N-SPVKIPVCKKIPS 234 (357)
Q Consensus 168 ----~---~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~-~~~~~~~~~~~~~ 234 (357)
+ ||..+...++.+++..+ ..+++||+|++...+.+.+++.+..++ .+..+++ + .++.++.++.+..
T Consensus 162 ~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (451)
T PF00083_consen 162 SYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKAS 240 (451)
T ss_pred ccccccccccccccccccccccccc-cccccccccceeccccccccccccccccccccccccccccccccccccccccee
Confidence 4 99999888887665444 456789999875444433333322222 1111110 0 0011111111112
Q ss_pred HHHHHHhhhccc----chHHHHHHHHHHHHh-hhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018388 235 IRDLICLLRSSV----TLSQAAVVAFFSGLS-EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI 309 (357)
Q Consensus 235 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (357)
+++ +++++ +.............. ......+.+...++ .+.+.. -......++...++. +++.++.||
T Consensus 241 ~~~----l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~ 312 (451)
T PF00083_consen 241 WRD----LFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS--FLATLILGLVNFLGT-LLAIFLIDR 312 (451)
T ss_pred eee----ccccccccccccccccccccccccccccccccccccccc-cccccc--ccccccccccccccc-ccccccccc
Confidence 223 22222 222222222222222 22333444444444 466665 112223334444444 666789999
Q ss_pred cchhHHHHHHHHHHHHHHHHHH
Q 018388 310 LGEAKLLSLGLFAACINMFICS 331 (357)
Q Consensus 310 ~~~~~~~~~~~~~~~i~~~~~~ 331 (357)
+|||++++.+....+++.+.+.
T Consensus 313 ~GRr~~~i~~~~~~~~~~~~~~ 334 (451)
T PF00083_consen 313 FGRRKLLIIGLLLMAICSLILG 334 (451)
T ss_pred cccccccccccccccccccccc
Confidence 9999999998888887766553
No 98
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1.5e-19 Score=163.76 Aligned_cols=298 Identities=16% Similarity=0.158 Sum_probs=212.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHH-HHHHhhhcccchH
Q 018388 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYA-LRTLTAMVCEGSI 125 (357)
Q Consensus 47 ~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~l~G~~~~~~~ 125 (357)
+.+..+.+|+.++......+..|+.+.+.||+|.|++.+.+.++..++.++..++++ +|.+++ .-++.|+ +.+..
T Consensus 77 ~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~---i~~l~lt~gvi~G~-G~~~~ 152 (509)
T KOG2504|consen 77 GSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATS---LWQLYLTFGVIGGL-GLGLI 152 (509)
T ss_pred CCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHhhc-cchhh
Confidence 333445799999999999999999999999999999999999999999999999999 766665 4578888 77777
Q ss_pred HHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC
Q 018388 126 NCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDD 201 (357)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 201 (357)
+..+...+..++ +|+|+.+.|+...+.++|..+-|.+..++ |||+.+++.+.+.+-.++.....-|.+++.++.+
T Consensus 153 ~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~ 231 (509)
T KOG2504|consen 153 YLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNE 231 (509)
T ss_pred hcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchh
Confidence 777777777665 58999999999999999988877776664 9999999998887666666555555333321110
Q ss_pred -CCCcc--------------ccccccccccc---CCCCCCCCccccccchhHHHHH----HhhhcccchHHHHHHHHHHH
Q 018388 202 -DLTRP--------------IITEETEGVNQ---NESNSPVKIPVCKKIPSIRDLI----CLLRSSVTLSQAAVVAFFSG 259 (357)
Q Consensus 202 -~~~~~--------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 259 (357)
.|... ........... ...+...+.+.+....+.+... ..+++++.++...+...+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~ 311 (509)
T KOG2504|consen 232 EKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAY 311 (509)
T ss_pred hhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHH
Confidence 00000 00000000000 0000000000000000111111 12455899999999999999
Q ss_pred HhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccc--hhHHHHHHHHHHHHHHHHHHhcCcch
Q 018388 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFICSISWSAW 337 (357)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~ 337 (357)
..+.....++|.|.++. |.+..+++++.++.++..++++ ++.|++.|+.. +++...++.+..+++.....+.++.+
T Consensus 312 ~g~~~p~~~l~~~~~~~-g~~~~~aa~l~Siigi~~i~gR-i~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~ 389 (509)
T KOG2504|consen 312 LGFNVPFVYLPSYAKSL-GLSSNDAAFLLSIIGVSDIIGR-IILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYV 389 (509)
T ss_pred HHHHHHHHHHHHHHhhc-CCChhhhHHHHHHHHHhhhhhh-hhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 99999999999999965 9999999999999999999999 88999999877 45566777777788887788888876
Q ss_pred HHHH-HHHHHHhhhc
Q 018388 338 VPYA-TTAFSVLVVF 351 (357)
Q Consensus 338 ~~~~-~~~~~~~~~~ 351 (357)
.++. +.++|+..|.
T Consensus 390 ~l~~~~~~fG~~~g~ 404 (509)
T KOG2504|consen 390 GLIVFSILFGFCVGS 404 (509)
T ss_pred HHHHHHHHHHHHHHH
Confidence 6655 5566665443
No 99
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.86 E-value=1.9e-18 Score=150.25 Aligned_cols=304 Identities=16% Similarity=0.152 Sum_probs=198.2
Q ss_pred chhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhh
Q 018388 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (357)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l 84 (357)
.++++.+......+...+..+...|.+|..+++ ..+++..++|.+.++..+...+.+|+.|.++||.|.||-+
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~-------~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~L 76 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQ-------VAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHL 76 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------ccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHH
Confidence 346678888888899999999999999999975 3578888999999999999999999999999999977765
Q ss_pred hHHHHHHHH--H-HHHHHHccc--hhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHh
Q 018388 85 TLPLTLSII--P-LAILAYRRS--ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC 159 (357)
Q Consensus 85 ~~~~~~~~~--~-~~~~~~~~~--~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 159 (357)
+.......+ + .....+.|- .+.+...+++-+..|+ .-....|+..+++.+.. ++.+.-.|-.....++|.++
T Consensus 77 l~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~-~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai 153 (412)
T PF01306_consen 77 LWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGL-VFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAI 153 (412)
T ss_dssp HHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTT-TTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHH
Confidence 544332221 2 222222221 0002223333344454 23344477777777664 33444566777888888888
Q ss_pred hHhhhHHh---hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHH
Q 018388 160 GTLAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (357)
Q Consensus 160 g~~~~~~l---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (357)
+..++|.+ +.+..||+....+++..++..+..|+.+++.+.+ | .+..+++..+.+
T Consensus 154 ~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~-~---------------------~~~~~~~~~~~~ 211 (412)
T PF01306_consen 154 ASLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVA-D---------------------ALGAKKDKVSLK 211 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SS-T---------------------TSSS------HH
T ss_pred HHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhh-c---------------------ccccCCCCCcHH
Confidence 88888876 4567788766655554444333333333222111 0 000112222455
Q ss_pred HHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhc---ccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchh
Q 018388 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA 313 (357)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (357)
+..+.+ |+|++|.+.+........+..+....|.|.+..+ +.+....|++.+.-.+..++.. .+.+++.+|+|.|
T Consensus 212 ~~~~l~-k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m-~~~p~li~rig~k 289 (412)
T PF01306_consen 212 DVLSLF-KMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMM-FFSPWLINRIGAK 289 (412)
T ss_dssp HHHHHT-TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HH
T ss_pred HHHHHh-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHH-HHHHHHHHhcChH
Confidence 655544 5889998888777777777777767777776543 3445668888888888888877 8889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcchHHHHH
Q 018388 314 KLLSLGLFAACINMFICSISWSAWVPYAT 342 (357)
Q Consensus 314 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 342 (357)
+.++++..+..+-.+..++.++.+.+...
T Consensus 290 ~~Lllag~i~~iRi~~~~~~~~~~~i~~~ 318 (412)
T PF01306_consen 290 NLLLLAGVIMAIRIIGSGFATNPWVISLI 318 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHT--SHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhhcchHHHHHH
Confidence 99999999999999999999888765543
No 100
>PRK09669 putative symporter YagG; Provisional
Probab=99.86 E-value=5.2e-19 Score=160.62 Aligned_cols=300 Identities=12% Similarity=0.056 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh----cCcchhhh-HHHH
Q 018388 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAMLT-LPLT 89 (357)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr----~Grk~~l~-~~~~ 89 (357)
+..+-...........++.|..+ ..+++..+.|.+.++..+...+..|+.|.++|| +||||.++ .+.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~-------~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~ 88 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTD-------VFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAI 88 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHH
Confidence 34444444445555666777654 567888999999999999999999999999998 78865544 6666
Q ss_pred HHHHHHHHHHHccch---hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCC-ccchhHHHHHHHHHHHHHHHhhHhhh-
Q 018388 90 LSIIPLAILAYRRSI---SFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCGTLAA- 164 (357)
Q Consensus 90 ~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~- 164 (357)
..++...+....++. ...+++++..++.+. ..........++.+|+.+ ++||++..++......+|..+++.+.
T Consensus 89 ~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~-~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~ 167 (444)
T PRK09669 89 PFGVVCLLTFYTPDFGATGKIIYACVTYILLSL-VYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIAL 167 (444)
T ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHH-HHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666555555432 113455555656565 333455567788999884 68899888888888888776665432
Q ss_pred ---HH-------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchh
Q 018388 165 ---RF-------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPS 234 (357)
Q Consensus 165 ---~~-------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (357)
.. .+|+..+.+.+++..+..+..++..+|.++++++ ++.+
T Consensus 168 pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~------------------------------~~~~ 217 (444)
T PRK09669 168 PLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVD------------------------------NSSS 217 (444)
T ss_pred HHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCc------------------------------CCCC
Confidence 22 2567777777776665555555555553221100 0012
Q ss_pred HHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhH
Q 018388 235 IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (357)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (357)
.++..+.+++||.++...+..++............+.|.++..+. ++..+.+.....+..+++. ++.+++.||+|+|+
T Consensus 218 ~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~gk~~ 295 (444)
T PRK09669 218 VWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGA-LLSERLLGKFDRVR 295 (444)
T ss_pred HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHH
Confidence 233344566788888887777776666655555555566655442 3333444444445555555 77889999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-cC-cchHHHH-HHHHHHhhhcccc
Q 018388 315 LLSLGLFAACINMFICSI-SW-SAWVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 315 ~~~~~~~~~~i~~~~~~~-~~-~~~~~~~-~~~~~~~~~~~~p 354 (357)
....+.....+....+.+ .+ +.+..++ ..+.+++.+...|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 338 (444)
T PRK09669 296 AFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTP 338 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHH
Confidence 988887666544333323 22 3333333 3455666665544
No 101
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.86 E-value=1.2e-20 Score=161.21 Aligned_cols=322 Identities=14% Similarity=0.112 Sum_probs=211.8
Q ss_pred hHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHH
Q 018388 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~ 90 (357)
.+.-.+.|.+..+...+.++.|.+....-+....+-+.+.-..+.+..+..++..++++++|++.||+|||+++...+++
T Consensus 44 ~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liI 123 (538)
T KOG0252|consen 44 IIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELII 123 (538)
T ss_pred HHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHH
Confidence 34455667778888887777777665533333333456667779999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccch----hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 91 SIIPLAILAYRRSI----SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 91 ~~~~~~~~~~~~~~----~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
..+++++++++... ...+++...|++.|+ +.|..+|.+.+..+|...+++||...+..-+..+.|...|.+++-.
T Consensus 124 mIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGi-GIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~I 202 (538)
T KOG0252|consen 124 MIICSALSGLSVGTTSPLGVMMTLCFFRFLLGI-GIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALI 202 (538)
T ss_pred HHHHHHHhccCCCCCCCcchhhHHHHHHHHhhc-cccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHH
Confidence 99999887776321 336789999999999 8888999999999999999999999988888888887777655433
Q ss_pred h-------------------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC-CCcccc-cccccccccCCCCCCCC
Q 018388 167 L-------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDD-LTRPII-TEETEGVNQNESNSPVK 225 (357)
Q Consensus 167 l-------------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~ 225 (357)
+ -||..+.+.++.++.. +...+.+||+++.+.... |.+.+. ...+......+++....
T Consensus 203 v~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~-ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~ 281 (538)
T KOG0252|consen 203 VSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLV-LYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAE 281 (538)
T ss_pred HHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHH-HHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccc
Confidence 1 4888888887775544 444567899876541100 000000 00000000000000001
Q ss_pred ccccccchhHHHHHHhhhcc--cchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHH--------HHHHHHHHH
Q 018388 226 IPVCKKIPSIRDLICLLRSS--VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFAD--------LMLIAGLAG 295 (357)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~~~ 295 (357)
......++..+...+.+.+. +.+...+...|+.-.+++....+....+++. |+.+.+..+ ...+....+
T Consensus 282 ~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~i-g~~~~~~~~~~~~~vA~~~~iia~~~ 360 (538)
T KOG0252|consen 282 SDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAI-GVIPSANTYHELFKVAEGNLIIAVCS 360 (538)
T ss_pred cCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhh-ccCCCcchHHHHHHHHHHHHHHHHHc
Confidence 01111111122222222222 4455566666777777777777777777765 776655444 122222222
Q ss_pred HHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCc
Q 018388 296 TISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS 335 (357)
Q Consensus 296 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 335 (357)
.+.+..+...++|++|||++.+.++.++.+..+.++...+
T Consensus 361 ~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~ 400 (538)
T KOG0252|consen 361 TVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYN 400 (538)
T ss_pred cCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcc
Confidence 2322245566889999999999999999999888877655
No 102
>PRK09848 glucuronide transporter; Provisional
Probab=99.86 E-value=7.6e-19 Score=159.78 Aligned_cols=306 Identities=12% Similarity=0.005 Sum_probs=188.9
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc----Ccchhh
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY----GRKAML 84 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~----Grk~~l 84 (357)
......+..+...+...+..+.++.|.++ ..+++..+.|.+.++..+...+..|++|+++||. ||||.+
T Consensus 9 ~~~~yg~g~~~~~~~~~~~~~~l~~y~~~-------~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~ 81 (448)
T PRK09848 9 TIVGYSLGDVANNFAFAMGALFLLSYYTD-------VAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPF 81 (448)
T ss_pred HHHhhccchHHhHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHH
Confidence 33444456666777777777888888765 4566778899999999999999999999999996 777765
Q ss_pred -hHHHHHHHHHHHHHHHcc-c--h-hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCC-ccchhHHHHHHHHHH-----
Q 018388 85 -TLPLTLSIIPLAILAYRR-S--I-SFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVL----- 153 (357)
Q Consensus 85 -~~~~~~~~~~~~~~~~~~-~--~-~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~----- 153 (357)
..+.+...+...+....+ . . ...+..+....+.++ +.+...+...++..+..+ ++||.+..+....+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~ 160 (448)
T PRK09848 82 LLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGL-CYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFV 160 (448)
T ss_pred HHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHH-HHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 455554444443332112 1 0 112333444455565 445565666677776665 467888766655433
Q ss_pred HHHHHhhHhhhHHhh------hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCcc
Q 018388 154 SASFVCGTLAARFLS------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIP 227 (357)
Q Consensus 154 ~~g~~~g~~~~~~l~------~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (357)
.++..++|.+++..+ |.....+.+++..+..++.....||+++++++
T Consensus 161 ~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~--------------------------- 213 (448)
T PRK09848 161 CLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVA--------------------------- 213 (448)
T ss_pred HHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCcc---------------------------
Confidence 345556676665431 11111222223223223333334443221111
Q ss_pred ccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhh
Q 018388 228 VCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLA 307 (357)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 307 (357)
+.+.++..+.+++||.++...+..++............|.|.++.+|.++...+.......+...++. .+.+++.
T Consensus 214 ----~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~l~~~l~ 288 (448)
T PRK09848 214 ----QPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASA-PLVPGMV 288 (448)
T ss_pred ----CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 01233334456678999888888888888888888888889998888776554443333345555666 7889999
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHhcC--cchHHHH-HHHHHHhhhcccc
Q 018388 308 PILGEAKLLSLGLFAACINMFICSISW--SAWVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 308 ~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~p 354 (357)
||+++|+.+..+..+..++.+.+.+.+ +.+..+. ..+.++|.+...|
T Consensus 289 ~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~ 338 (448)
T PRK09848 289 ARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMT 338 (448)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988888877766644 2333333 3445666655543
No 103
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.85 E-value=5.2e-18 Score=150.05 Aligned_cols=283 Identities=21% Similarity=0.228 Sum_probs=202.8
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcC-cchhhhHHHHHH
Q 018388 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-RKAMLTLPLTLS 91 (357)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~G-rk~~l~~~~~~~ 91 (357)
+....++..+..+...|.+|.++++ .+.+..++|.+.++..+...++.+++|.++||++ +||.+.++.++.
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~--------~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~ 78 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES--------RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLS 78 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHH
Confidence 4455677778888899999999874 3577788999999999999999999999999986 477777777777
Q ss_pred HHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHh-----hhHH
Q 018388 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL-----AARF 166 (357)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~-----~~~~ 166 (357)
++........++ ++.+++..++..+ ......|...++..+... ++++-.|-.....++|.+++.. +.+.
T Consensus 79 ~~~~~~~~~~~~---f~~~~~~~~l~~~-~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~ 152 (400)
T PF03825_consen 79 ALALLLLAFSSS---FWWLFVIMLLFSF-FFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGY 152 (400)
T ss_pred HHHHHHHHHhcc---HHHHHHHHHHHHH-HHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhh
Confidence 777666677777 6767777777776 445556788888877775 3445556666666777666533 2233
Q ss_pred hhh---HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhh
Q 018388 167 LST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (357)
Q Consensus 167 l~~---~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (357)
.++ ...+++.+....+... ..+.+|+.+++++.+++ .++...++.++ +.
T Consensus 153 ~~~~~~~~~~~i~~~~~~ll~~-~~l~lp~~~~~~~~~~~--------------------------~~~~~~~~~~~-ll 204 (400)
T PF03825_consen 153 LGISGTSLIFYIAAILSLLLAG-FALFLPKTPPKRSAKES--------------------------VKKLLGLDALK-LL 204 (400)
T ss_pred hccccccHHHHHHHHHHHHHHH-HHHhCCCCccccccCCC--------------------------cccccchHHHH-Hh
Confidence 222 2445555544333322 23456776633322100 01111233334 44
Q ss_pred cccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHH
Q 018388 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (357)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (357)
|+|++...++..++.+.....++++.+.|+++.-|.+....+...+...+..++.- +..+++.+|+|.++++.++.+..
T Consensus 205 k~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f-~~~~~~~~r~g~~~ll~~a~~~~ 283 (400)
T PF03825_consen 205 KNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFF-FFSGRFLKRFGIKWLLLLALVAY 283 (400)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHH
Confidence 58888888889999999999999999999999844777777888887777777776 88899999999999999999999
Q ss_pred HHHHHHHHhc-CcchH
Q 018388 324 CINMFICSIS-WSAWV 338 (357)
Q Consensus 324 ~i~~~~~~~~-~~~~~ 338 (357)
++=..+++.. ++.+.
T Consensus 284 ~vR~~l~a~~~~~~~~ 299 (400)
T PF03825_consen 284 AVRWLLYAYFSDPWPF 299 (400)
T ss_pred HHHHHHHHHhcCCcHH
Confidence 9999888887 44443
No 104
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=1.9e-18 Score=153.96 Aligned_cols=324 Identities=31% Similarity=0.511 Sum_probs=226.9
Q ss_pred hHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPG-LDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
..+....++..++.++..+..........+.. ++....+....+.......+...+.++..|.++||+|||..+.....
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 34455566666776666655544444322211 22222222333444444578889999999999999999999999999
Q ss_pred HHHHHHHHHHHccchhHHHHHHHHHHHhhh-cccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-
Q 018388 90 LSIIPLAILAYRRSISFFYAYYALRTLTAM-VCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (357)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~-~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l- 167 (357)
...+......+.. +|. ++ +.++ ++.+.......++++|...+|+|....++.+.....+..++|.+++++
T Consensus 101 ~~~l~~~~~~~~~----~~~-~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~ 172 (463)
T KOG2816|consen 101 GTILPALCLLFQG----YWF-FL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLV 172 (463)
T ss_pred HHHHhHHHHHHHH----HHH-hh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 8888877777655 232 22 4444 334455678899999999999999999999999999999999999886
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhc
Q 018388 168 ---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 244 (357)
Q Consensus 168 ---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (357)
+.-.+|.+..+..++..+...+++||+..++++++. ... +..+.+.......+..+...+ ..+
T Consensus 173 ~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~------------~~~-~~~~~~~~~~~~~~~~~~~~~-~~~ 238 (463)
T KOG2816|consen 173 KFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDA------------TLR-ELTPGSLDSSHVADAFQSLTK-VGP 238 (463)
T ss_pred HhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccc------------ccc-ccCCCcccchhhhhhhhhhcc-cCC
Confidence 667789999888888888888999998766555310 000 000000001111111122111 333
Q ss_pred ccchHHHHHHHHHHHHhhhhhhH-HHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHH
Q 018388 245 SVTLSQAAVVAFFSGLSEGGMQA-SFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (357)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (357)
+|..+.+....+........-.. .++.|.+.++||+..+.+.+.+..+....+++.+..+.+.+.++.|+.+..|+...
T Consensus 239 ~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~ 318 (463)
T KOG2816|consen 239 DRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSE 318 (463)
T ss_pred CccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHH
Confidence 45555555555554444443333 55789999999999999999999999999999777778999999999999999999
Q ss_pred HHHHHHHHhcCcchHHHHHHHHHHhhhcccccC
Q 018388 324 CINMFICSISWSAWVPYATTAFSVLVVFATPSV 356 (357)
Q Consensus 324 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 356 (357)
.+....+++.++.|..+....+.....+..|+.
T Consensus 319 ~~~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~ 351 (463)
T KOG2816|consen 319 FLQLLLFAFATETWMMFAAGVVVALAGIVFPAI 351 (463)
T ss_pred HHHHHHHHHhccchhhhHHHHHHHhhcchhHHH
Confidence 999999999999999998877777777777653
No 105
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.83 E-value=1.2e-17 Score=146.73 Aligned_cols=310 Identities=14% Similarity=0.068 Sum_probs=227.3
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh----cCcchhh-
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAML- 84 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr----~Grk~~l- 84 (357)
...-....+...+........+..+..| ..++++...|.+..+.-+-.++..|+.|.++|| +||+|++
T Consensus 14 ki~Yg~gd~~~~~~~~~~~~yLl~fYTd-------v~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~l 86 (467)
T COG2211 14 KIGYGLGDFASNFAFGIVVLYLLFFYTD-------VFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWL 86 (467)
T ss_pred HHhhcchhhHHHHHHHHHHHHHHHHHhc-------ccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHH
Confidence 3444556666666667777777777754 678889999999999999999999999999995 7886654
Q ss_pred hHHHHHHHHHHHHHHHccch---hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCC-ccchhHHHHHHHHHHHHHHHhh
Q 018388 85 TLPLTLSIIPLAILAYRRSI---SFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCG 160 (357)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g 160 (357)
+.+.+..++.+.++-.+++. ......++...+.++ +-........++.++.++ ++||.+..++-+...++|..+.
T Consensus 87 L~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l-~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~ 165 (467)
T COG2211 87 LWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGL-GYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLV 165 (467)
T ss_pred HHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHH-HHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46667888888888877741 113445566666677 555565667788888876 7899999999999999886554
Q ss_pred Hhhh----HH-------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCcccc
Q 018388 161 TLAA----RF-------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVC 229 (357)
Q Consensus 161 ~~~~----~~-------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (357)
..+. .. .||+..-.+.+++..+..+.+++..+|...++++. +.
T Consensus 166 ~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~--------------------------~~ 219 (467)
T COG2211 166 AVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPT--------------------------KT 219 (467)
T ss_pred HHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccC--------------------------cc
Confidence 3222 22 26777777777777777777777777765433321 01
Q ss_pred ccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018388 230 KKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI 309 (357)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (357)
..+.++++....+++||.++..++..++.........+...+|.+...|.+...............+++. ++.+++.+|
T Consensus 220 ~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~-~~~p~L~~~ 298 (467)
T COG2211 220 GVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGL-ILWPRLVKK 298 (467)
T ss_pred cccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHH-HhHHHHHHH
Confidence 1233556656667789999999988888888888888999999999989888886676666666666656 888999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhcCcc--hHHHH-HHHHHHhhhcccc
Q 018388 310 LGEAKLLSLGLFAACINMFICSISWSA--WVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 310 ~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~p 354 (357)
+|+|++...+.++..++.+++.+.+.. +..++ .++.++|.+...|
T Consensus 299 ~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~ 346 (467)
T COG2211 299 FGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANP 346 (467)
T ss_pred hchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcccc
Confidence 999999999999999998888887632 33333 3455666666654
No 106
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.82 E-value=6.5e-17 Score=145.83 Aligned_cols=281 Identities=14% Similarity=0.123 Sum_probs=196.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH-HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHH
Q 018388 50 IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL-PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128 (357)
Q Consensus 50 ~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 128 (357)
....++..++..+...+..|+.|.++|+-|+||.++. ...+..+.+.++.+.+. +.++...+.-++.-+ +.+.....
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~-~~~~~~~~l~iia~v-~~~~~~vf 146 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSP-GQWWLALVLFIIANV-GYEASNVF 146 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCc-chHHHHHHHHHHHHH-HHHHHHHH
Confidence 3456788999999999999999999999998776664 44555566666666522 223333333334333 44455567
Q ss_pred HHHHHhhCCCccch--------------------------hHHHHHHHHHHHHHHHhhHhhhHHh------------hhH
Q 018388 129 ALAYVADNISERQR--------------------------ASAFGILLGVLSASFVCGTLAARFL------------STT 170 (357)
Q Consensus 129 ~~~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l------------~~~ 170 (357)
..+++.|..+++++ ++..+.-.....+|.++.-++.-.+ +-|
T Consensus 147 yna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r 226 (477)
T PF11700_consen 147 YNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIR 226 (477)
T ss_pred HHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhh
Confidence 89999999998888 8888887777777776654443221 237
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHH
Q 018388 171 SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQ 250 (357)
Q Consensus 171 ~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (357)
..+.+.++..++..+...+.+||.+++++.+.. ...........++..+..+|.|.+..
T Consensus 227 ~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~---------------------~~~~~~g~~~l~~t~k~~~~~~~~~~ 285 (477)
T PF11700_consen 227 VAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSG---------------------SSYLRFGFKRLWRTFKEIRKLRQLFL 285 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc---------------------hhHHHHHHHHHHHHHHHHHhChHHHH
Confidence 788888887777777777888887653222100 00000111123334455677889999
Q ss_pred HHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchh--HHHHHHHHHHHHHHH
Q 018388 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA--KLLSLGLFAACINMF 328 (357)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~i~~~ 328 (357)
.++..+++.-+...+......|.++.+|++..+...+.....+.++++. ++.+++.||+|.| +++..+.....+..+
T Consensus 286 fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga-~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~ 364 (477)
T PF11700_consen 286 FLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGA-LLFGWLQDRFGPKTKRTLLISLILWIIIPL 364 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998 8889999999998 777777766644332
Q ss_pred HHHh--------cCcchHHHH-HHHHHHhhhcccc
Q 018388 329 ICSI--------SWSAWVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 329 ~~~~--------~~~~~~~~~-~~~~~~~~~~~~p 354 (357)
.-.+ ..+.+.+++ ..+.|+..|..++
T Consensus 365 ~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs 399 (477)
T PF11700_consen 365 YGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQS 399 (477)
T ss_pred HHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHH
Confidence 2222 345556665 5667777665544
No 107
>PTZ00207 hypothetical protein; Provisional
Probab=99.82 E-value=1.5e-17 Score=152.08 Aligned_cols=145 Identities=12% Similarity=0.114 Sum_probs=117.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHc------cchhHHHHHHHHHHHhh
Q 018388 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR------RSISFFYAYYALRTLTA 118 (357)
Q Consensus 45 ~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~r~l~G 118 (357)
+++++..+.+++.++. .....+.++.|+++||+|||+++.++.++..+++++++++ ++ ++.+++.|++.|
T Consensus 56 ~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s---~~~l~l~r~l~G 131 (591)
T PTZ00207 56 RYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGS---VVRLSVYNGLMT 131 (591)
T ss_pred HhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCc---HHHHHHHHHHHH
Confidence 4455556667776663 3345677789999999999999999999999999999987 46 889999999999
Q ss_pred hcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHh-hHhhhHHh--hhHHHHHHHHHHHHHHHHHHHHhccCCC
Q 018388 119 MVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC-GTLAARFL--STTSAFQAATIVSMLAAAYMRVFLKDDV 195 (357)
Q Consensus 119 ~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l--~~~~~f~~~~~~~~~~~~~~~~~~~e~~ 195 (357)
+ +.+...+.....+.+++| ++||++.|+.....++|..+ +++..+++ +|++.|++.+++.++..++.+.++++++
T Consensus 132 ~-G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~p~ 209 (591)
T PTZ00207 132 L-GCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRLPP 209 (591)
T ss_pred H-HHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeCCc
Confidence 9 667777888888999986 78999999999999999874 66666665 7888888888888877777776666554
No 108
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.81 E-value=6.4e-18 Score=145.37 Aligned_cols=218 Identities=11% Similarity=0.058 Sum_probs=162.8
Q ss_pred HHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-------------------
Q 018388 107 FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL------------------- 167 (357)
Q Consensus 107 ~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l------------------- 167 (357)
++.++++-++.|. +.+..++..+.++++..++|++++.+++.+.++++|.++||.+++.+
T Consensus 10 ~~~~l~~~f~~g~-G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 10 YVLFLGALFVLAS-GLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHh-hHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 8889999999999 88999999999999999999999999999999999999999998742
Q ss_pred -hhHHHHHHHHHHHHHHHHHH-HHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcc
Q 018388 168 -STTSAFQAATIVSMLAAAYM-RVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (357)
Q Consensus 168 -~~~~~f~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (357)
.|+++|++.+.+..+..+.. ...+||.+++++++ . +.++. . ..++ .+++
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~------------------~--~~~~~--~---~~~~----~~~~ 139 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVAR------------------V--SSGDT--T---QKTS----AFQF 139 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccc------------------c--ccccc--c---chhh----HHhh
Confidence 47889987766644443332 22234432111110 0 00000 0 0011 2346
Q ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHhhhhh--cccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHH
Q 018388 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (357)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (357)
|.++...+..+++...+.+...|.+.|+++. +|+++.+.+...+....+.++++ ++.+++.||+++|+.+..+..+.
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr-~~~~~l~~r~g~~~~l~~~~~l~ 218 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGR-FIGSAVMPMISQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHH
Confidence 6777778888888888999999999999864 68999999999999999999998 99999999999999988888888
Q ss_pred HHHHHHHHhcCcchHHHHHHHHHHhhhccccc
Q 018388 324 CINMFICSISWSAWVPYATTAFSVLVVFATPS 355 (357)
Q Consensus 324 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 355 (357)
.++.++....++....+...+++++.+..+|.
T Consensus 219 ~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 219 VLLSIGAALTHGYVAMWFVLALGLFNSIMFPT 250 (310)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 77766555555444444455677888777775
No 109
>PRK11462 putative transporter; Provisional
Probab=99.81 E-value=1.7e-16 Score=144.30 Aligned_cols=271 Identities=11% Similarity=0.003 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh----cCcchhhh-HHH
Q 018388 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAMLT-LPL 88 (357)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr----~Grk~~l~-~~~ 88 (357)
.++.+.......+....+..+..| ..+++....|.+..+.-+-.++..|+.|.++|| +||||+++ ++.
T Consensus 15 g~g~~~~~~~~~~~~~~l~~fyt~-------~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~ 87 (460)
T PRK11462 15 GMGDAASHIIFDNVMLYMMFFYTD-------IFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGA 87 (460)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHH-------hhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHH
Confidence 344444555556666666777654 567888899999999999999999999999996 79877665 565
Q ss_pred HHHHHHHHHHHHccch---hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCC-ccchhHHHHHHHHHHHHHHHhhHhhh
Q 018388 89 TLSIIPLAILAYRRSI---SFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCGTLAA 164 (357)
Q Consensus 89 ~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~ 164 (357)
+..+++..++...++. .....+.+..++..+ +.........++.+|..+ +|||++..++...+..+|..+++.+.
T Consensus 88 i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~-~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~ 166 (460)
T PRK11462 88 LPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTL-LYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLM 166 (460)
T ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHH-HHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777776665555431 113344555555565 445555678888899987 78999999999999988877765543
Q ss_pred HH----h-------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccch
Q 018388 165 RF----L-------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIP 233 (357)
Q Consensus 165 ~~----l-------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (357)
.. . +|+....+.+++..+...+.+...+|.++.+++ +.
T Consensus 167 ~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~-------------------------------~~ 215 (460)
T PRK11462 167 MPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPT-------------------------------TT 215 (460)
T ss_pred HHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCcc-------------------------------CC
Confidence 22 2 456655566655555544444444443211110 11
Q ss_pred hHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchh
Q 018388 234 SIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA 313 (357)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (357)
+.++..+...+||.++......++..............|.++..|.+ ...+.+.....+..+++. .+++++.||+++|
T Consensus 216 ~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~-~l~~~l~~r~gkk 293 (460)
T PRK11462 216 SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGS-ALAKPLTDWKCKV 293 (460)
T ss_pred CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHH-HHHHHHHHHhChH
Confidence 24455555667888877776666666666665666666666665543 334566667777777777 8889999999998
Q ss_pred HHHHHHHHHHHH
Q 018388 314 KLLSLGLFAACI 325 (357)
Q Consensus 314 ~~~~~~~~~~~i 325 (357)
+....+.....+
T Consensus 294 ~~~~~~~~~~~~ 305 (460)
T PRK11462 294 TIFWWTNALLAV 305 (460)
T ss_pred HHHHHHHHHHHH
Confidence 887655444444
No 110
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.79 E-value=1.3e-17 Score=146.68 Aligned_cols=253 Identities=15% Similarity=0.153 Sum_probs=183.1
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCc-chhh
Q 018388 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR-KAML 84 (357)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Gr-k~~l 84 (357)
.+|.+++..+.+++.....+++.|..-.|.++. +.+.+....|++.++..++.++++|..|+++.|.++ |+++
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~l------D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl 105 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKL------DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL 105 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhc------CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH
Confidence 467888999999999999999999988888762 223334567999999999999999999999999998 9999
Q ss_pred hHHHHHHHHHHHHH-HHccchh-HHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHh
Q 018388 85 TLPLTLSIIPLAIL-AYRRSIS-FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (357)
Q Consensus 85 ~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (357)
+.+.++..+++++. .+..... ..+.++++|++.|+ +.+.. ....+|+++....++|.|+++....+..+|.++||.
T Consensus 106 i~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gv-g~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~ 183 (488)
T KOG2325|consen 106 IVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGV-GVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPT 183 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc-CcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHH
Confidence 99999999999998 4432222 47899999999999 65666 689999999999999999999999999999999998
Q ss_pred hhHHh------h-----------hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCC
Q 018388 163 AARFL------S-----------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVK 225 (357)
Q Consensus 163 ~~~~l------~-----------~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (357)
++..+ | +..+-|+.+++.++..+...++++|..+...++... +++++ +
T Consensus 184 ~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~------------~~~~~---~ 248 (488)
T KOG2325|consen 184 IQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKR------------SVEEE---K 248 (488)
T ss_pred HHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccc------------cchhh---c
Confidence 87654 1 145778888888888888888889887665443110 00000 0
Q ss_pred ccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHH
Q 018388 226 IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLM 288 (357)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 288 (357)
.+.++...+..+ .+..+.+.+..+...+......+..+.+....++++.+++....
T Consensus 249 ~~~~~~~~~~~d-------~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~ 304 (488)
T KOG2325|consen 249 SDIEKVKKPKLD-------WVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYN 304 (488)
T ss_pred cchhhhccCChh-------HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhh
Confidence 000000000011 12233344455555555555567777777777888877744433
No 111
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.78 E-value=1.9e-16 Score=132.03 Aligned_cols=157 Identities=15% Similarity=0.023 Sum_probs=129.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccc
Q 018388 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEG 123 (357)
Q Consensus 44 ~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 123 (357)
..++.+.-+..++......+..+++..||..+|++|||+.+.+......+...+.+.++| +.++.+.|.+.|+ +.|
T Consensus 106 ~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spn---f~~L~~f~~l~~~-g~g 181 (528)
T KOG0253|consen 106 EVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPN---FASLCVFRALWGF-GVG 181 (528)
T ss_pred hhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCC---eehhhHHHHHHhc-cCC
Confidence 356688888899999999999999999999999999999999999999999999999999 8888999999999 556
Q ss_pred hHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 018388 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199 (357)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~ 199 (357)
. .|...++-.|..|..+|..-+-.. ..+.+|.+....++-. +||||..........+ +....+++||+++..-
T Consensus 182 g-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~-~a~f~~w~~ESpRf~~ 258 (528)
T KOG0253|consen 182 G-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMF-AARFLVWVYESPRFYL 258 (528)
T ss_pred C-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHH-HHHHHhhcccCcchhh
Confidence 6 488899999999988888776666 8889998888766644 4999988777755333 3444567899998765
Q ss_pred CCCCCccc
Q 018388 200 DDDLTRPI 207 (357)
Q Consensus 200 ~~~~~~~~ 207 (357)
.+.|..++
T Consensus 259 ~~G~~~kA 266 (528)
T KOG0253|consen 259 AKGDDYKA 266 (528)
T ss_pred hcCChHHH
Confidence 55554444
No 112
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.77 E-value=1.2e-15 Score=137.51 Aligned_cols=167 Identities=11% Similarity=0.017 Sum_probs=129.7
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-Ccchhh
Q 018388 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAML 84 (357)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-Grk~~l 84 (357)
.++.++.++...+...++...+...+|.|+.+ +++.+..+.+.+.+.+.....++.+++|+++||+ ||||.+
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~-------~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i 79 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTN-------QLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV 79 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH
Confidence 35667777888888888888888899999875 3455667778899999999999999999999999 999999
Q ss_pred hHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCcc--chhHHHHHHHHHHHHHHHhhHh
Q 018388 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER--QRASAFGILLGVLSASFVCGTL 162 (357)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~ 162 (357)
+.+.++..++..++...++. ...++++..+.++ +.|...+...++++|.+|++ +|.++.++.....++|..++|.
T Consensus 80 liG~il~~lg~lll~~~~~~--~~~~~l~l~li~i-G~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~ 156 (493)
T PRK15462 80 MLGALLMAIGHVVLGASEIH--PSFLYLSLAIIVC-GYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPI 156 (493)
T ss_pred HHHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHH-hcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHH
Confidence 99999999988777654321 1222333223333 33455566788999999875 6888999999999999999999
Q ss_pred hhHHh----hhHHHHHHHHHHHHH
Q 018388 163 AARFL----STTSAFQAATIVSML 182 (357)
Q Consensus 163 ~~~~l----~~~~~f~~~~~~~~~ 182 (357)
+.+++ ||++.|.+.++..++
T Consensus 157 l~g~L~~~~Gw~~~F~iaaigm~l 180 (493)
T PRK15462 157 ACGYAQEEYSWAMGFGLAAVGMIA 180 (493)
T ss_pred HHHHHHhhhChHHHHHHHHHHHHH
Confidence 99886 899999987654333
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.77 E-value=1.7e-16 Score=135.42 Aligned_cols=304 Identities=13% Similarity=0.069 Sum_probs=213.4
Q ss_pred HHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhh-HHHHHHHHHHHHHHHcc
Q 018388 24 TMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT-LPLTLSIIPLAILAYRR 102 (357)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~-~~~~~~~~~~~~~~~~~ 102 (357)
...+..++|.|.++..+.+..+..-+....|...++..+...+.+|+.|.++|+.|+||..+ ....+..++..+..+++
T Consensus 31 ~ivtt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~ 110 (438)
T COG2270 31 AIVTTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIP 110 (438)
T ss_pred eeeeeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhC
Confidence 34455677888887554432233334456799999999999999999999999999877666 45555566666777766
Q ss_pred chhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhh--HH--------------
Q 018388 103 SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA--RF-------------- 166 (357)
Q Consensus 103 ~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~-------------- 166 (357)
+...++..++.-.+..+ +.........+++.|..++++-++..+.-.....+|..+--+.. ..
T Consensus 111 ~~s~~~~~l~~~il~~i-~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~ 189 (438)
T COG2270 111 PGSYLLLLLLFLILASI-GFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLG 189 (438)
T ss_pred CCchHHHHHHHHHHHHH-hcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeec
Confidence 53335666666777777 55566678999999999988877766655444445443322111 10
Q ss_pred ------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHH
Q 018388 167 ------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (357)
Q Consensus 167 ------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (357)
..-|..+.+.++-.++..+..++..|+.++...+. .+...+.-+.+++.++
T Consensus 190 l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~-----------------------~~~l~~g~k~L~~t~k 246 (438)
T COG2270 190 LPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPP-----------------------PTALRNGFKELKSTFK 246 (438)
T ss_pred cCccccccchhHHHHHHHHHHHHHhHHHhcccccccccccc-----------------------hHHHHHHHHHHHHHHH
Confidence 12366777777766666666666666654322110 0000111123344455
Q ss_pred hhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHH
Q 018388 241 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 320 (357)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 320 (357)
..++++++...+++.+++.-+..+.......|....+|++..+...+.....+.+++++ ++.|++.||++.|+++..+.
T Consensus 247 ~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~-ii~g~Ld~rfg~k~vl~~~l 325 (438)
T COG2270 247 EIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGA-IIAGFLDERFGSKPVLMIGL 325 (438)
T ss_pred HHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCceeehHHH
Confidence 57778899999999999999999999999999998899999999999999999999998 88999999999999999999
Q ss_pred HHHHHHHHHHHhcCcchHHHH-HHHHHHhhhcc
Q 018388 321 FAACINMFICSISWSAWVPYA-TTAFSVLVVFA 352 (357)
Q Consensus 321 ~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 352 (357)
++..+.++...+.......+. +.+++...|-.
T Consensus 326 vi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~ 358 (438)
T COG2270 326 VILSIAALYLIFLEGELDFWILGLLVGTSLGGA 358 (438)
T ss_pred HHHHHHHHHHHHccccHHHHHHHHHHHHhcchH
Confidence 888888766666555444444 56666665544
No 114
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.76 E-value=5.3e-15 Score=126.65 Aligned_cols=279 Identities=15% Similarity=0.102 Sum_probs=197.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcC-----cchhhh-HHHHHHHHHHHHHHHc-----c-----c-hhHH
Q 018388 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-----RKAMLT-LPLTLSIIPLAILAYR-----R-----S-ISFF 107 (357)
Q Consensus 45 ~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~G-----rk~~l~-~~~~~~~~~~~~~~~~-----~-----~-~~~~ 107 (357)
|++++....+...++..+.. ...+.+|..||+.+ ||..++ .+.+....+..+..++ . + ..+.
T Consensus 9 EL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~ 87 (403)
T PF03209_consen 9 ELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWL 87 (403)
T ss_pred HhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHH
Confidence 67778888888888888876 46999999999999 887766 4555555554444432 2 0 1112
Q ss_pred --HHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-----hhHH--HHHHHHH
Q 018388 108 --YAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTS--AFQAATI 178 (357)
Q Consensus 108 --~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-----~~~~--~f~~~~~ 178 (357)
....+...+.|+ +.+...+...++++|..|||+|+++.++...+.-+|.+++..+.+.+ ..|. .+...++
T Consensus 88 g~~~a~l~F~l~G~-G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~ 166 (403)
T PF03209_consen 88 GLALAALAFLLYGL-GVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVAL 166 (403)
T ss_pred HHHHHHHHHHHHHh-hHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHH
Confidence 244556677888 66666678999999999999999999999999999999999888875 1122 2333333
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHH
Q 018388 179 VSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFS 258 (357)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (357)
+.++..++..+. .|++.++..+ ..++++.++++.++.+..+|+.+.++...++.
T Consensus 167 i~~~l~~ia~wg-~E~r~~~~~~-------------------------~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~ 220 (403)
T PF03209_consen 167 IALLLNLIALWG-QEPRRSRRAA-------------------------AAERPRPPFREAWRQVWASPQARRFFVFLFLG 220 (403)
T ss_pred HHHHHHHHHHHh-cccCCccccc-------------------------CCCCCCccHHHHHHHHHhCCChhHHHHHHHHH
Confidence 323222222222 2322221110 11223346666677777899999999999999
Q ss_pred HHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhh-ccchhHHHHHHHHHHHHHHHHHHh---cC
Q 018388 259 GLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP-ILGEAKLLSLGLFAACINMFICSI---SW 334 (357)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~i~~~~~~~---~~ 334 (357)
...+......+-+|--|.+|++..+...+....+.+..++. .+.+++.. |.++++....++....+++.++.+ ..
T Consensus 221 t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~-~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~ 299 (403)
T PF03209_consen 221 TLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGM-LLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLG 299 (403)
T ss_pred HHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999988887 56666554 778888888888888888766554 34
Q ss_pred cchHHHH-HHHHHHhhhcc
Q 018388 335 SAWVPYA-TTAFSVLVVFA 352 (357)
Q Consensus 335 ~~~~~~~-~~~~~~~~~~~ 352 (357)
+.+.+.. ..++|++.|+.
T Consensus 300 ~~~~~~~~~~l~G~g~G~f 318 (403)
T PF03209_consen 300 SPWLFRPGVFLLGLGNGLF 318 (403)
T ss_pred cchHHHHHHHHHHHhhhHH
Confidence 5555555 56677777654
No 115
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.73 E-value=7.6e-16 Score=140.09 Aligned_cols=293 Identities=12% Similarity=0.040 Sum_probs=182.6
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcC-----cchhh
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-----RKAML 84 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~G-----rk~~l 84 (357)
+..+....+..++. ++....++.++++ +++++..+.+...+...+...+ .+++|+++||++ ||+.+
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~-------~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l 98 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTD-------DLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYL 98 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHH-------hcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHH
Confidence 34444455666666 5555566666654 4567777888888888999877 555999999997 66667
Q ss_pred hHHHHHHH-HHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHH---HHHHHHHHHHHHhh
Q 018388 85 TLPLTLSI-IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAF---GILLGVLSASFVCG 160 (357)
Q Consensus 85 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~---~~~~~~~~~g~~~g 160 (357)
+++.++.. +.....+..++ ......+..++.++ +.+...++..++..|..+ |++.... +......++|.++|
T Consensus 99 ~~~~~l~~~~~~~~l~~~~~--~~~~~~~~~~l~~~-~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg 174 (468)
T TIGR00788 99 VLSGLLGSAILYGLLPGKVS--SAKVAAAFIFLAAL-AKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLIS 174 (468)
T ss_pred HHHHHHHHHHHHHhcccccc--hHHHHHHHHHHHHH-HHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHH
Confidence 77766653 33333333333 13333447888888 777888899999999998 5554433 33333345788888
Q ss_pred HhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC-CCCcccccccccccccCCCCCCCCccccccchhH
Q 018388 161 TLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDD-DLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI 235 (357)
Q Consensus 161 ~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (357)
+.++|.+ +|+..|++.+.+.++. ....+++||+++....+ .+... .. .............+..
T Consensus 175 ~~l~G~l~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~~~~~~~~~~~~~~---------~~--~~~~~~~~~~~~~~~~ 242 (468)
T TIGR00788 175 SLLGGPLLDKTLTRILFLITAALLLLQ-LFVSNLSKERRAFVRPRIGTYLE---------MN--MALLTLGVLANVKVQI 242 (468)
T ss_pred HHHHHHHHHhcCcchHHHHHHHHHHHH-HHHHHhcccccccccccccccch---------hh--hhhhhhhHHHHHHHHH
Confidence 8887764 7999999988886666 44456678864211110 00000 00 0000000000111223
Q ss_pred HHHHHhhhcccchHHHHHHHHH-HHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhH
Q 018388 236 RDLICLLRSSVTLSQAAVVAFF-SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (357)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (357)
++..+. .++|.++...+..++ +.......... -.+.++..|+++.+.|......+++.+++. .+.+++.+|++.|+
T Consensus 243 ~~l~~~-l~~~~i~~~l~fifl~~~~~~~~~~~~-f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~-~~~~~~~~~~~~r~ 319 (468)
T TIGR00788 243 LGLRGA-IQLLEIAKPLIFIFLSYANLPGASGSV-FCATTQCLPGGPSFSGMSKVVGNLGSLCGV-GGYDRFLKTFPYRL 319 (468)
T ss_pred HHHHHH-HhcHHHHHHHHHHHHHHhhcCCCCcee-EEEEcccCCCCcchhhhHHHHHHHHHHHHH-HHHHHHHhhCCHHH
Confidence 344444 446777765555555 32222222211 113345579999999999999999999888 77788889999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 018388 315 LLSLGLFAACINMFIC 330 (357)
Q Consensus 315 ~~~~~~~~~~i~~~~~ 330 (357)
++..+.++.+++....
T Consensus 320 ~l~~~~~l~~~~~~~~ 335 (468)
T TIGR00788 320 LFGVTTLLYTLSSLFD 335 (468)
T ss_pred HHHHHHHHHHHHHhCc
Confidence 9999998888876443
No 116
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.70 E-value=7e-14 Score=117.98 Aligned_cols=274 Identities=13% Similarity=0.057 Sum_probs=179.3
Q ss_pred HHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHH
Q 018388 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (357)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~ 93 (357)
.....+...+..+..|..-...+ +++.+..+++.+........++..++.|.++||+|||+.-+..+++.++
T Consensus 40 l~vY~La~~aDWLQGpY~Y~LY~--------~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~ 111 (354)
T PF05631_consen 40 LLVYLLAMAADWLQGPYLYALYE--------SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSL 111 (354)
T ss_pred HHHHHHHHHHHHhhcchhHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 33445556667777776655443 3456667789999999999999999999999999999999999999988
Q ss_pred HHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHH-hhCC----CccchhHHHHHHH-HHHHHHHHhhHhhhHHh
Q 018388 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYV-ADNI----SERQRASAFGILL-GVLSASFVCGTLAARFL 167 (357)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i-~~~~----~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l 167 (357)
+++ .-..++ ++.++++|++.|+ +......+-.++. .|.- |+|..+...+... ..+++-.+.+.+++..+
T Consensus 112 scl-~k~~~~---~~~L~~GRvlgGi-aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l 186 (354)
T PF05631_consen 112 SCL-TKHSSN---YPVLLLGRVLGGI-ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVL 186 (354)
T ss_pred HHH-HHhccc---cHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 885 445577 8999999999999 7777777777765 4432 3333334444333 22333334444444443
Q ss_pred ------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHh
Q 018388 168 ------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241 (357)
Q Consensus 168 ------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (357)
|...+|.....+..+..+++...-+|...+..++ .+.....++..+.
T Consensus 187 ~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~---------------------------~~~~~~~~~a~~~ 239 (354)
T PF05631_consen 187 ADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSS---------------------------SSLSGSFREAWRA 239 (354)
T ss_pred HHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccc---------------------------cchHHHHHHHHHH
Confidence 2367898888877776666655556654432221 1112245566677
Q ss_pred hhcccchHHHHHHHHHHHHhhhhh-hHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHH
Q 018388 242 LRSSVTLSQAAVVAFFSGLSEGGM-QASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 320 (357)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 320 (357)
++++|+++.+.++..+.-...+.+ ..|.|..-.+ +- ....|++++...+..++++.+..-...++......+...+
T Consensus 240 i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~--~~-~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~ 316 (354)
T PF05631_consen 240 ILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD--DE-ELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVF 316 (354)
T ss_pred HHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC--CC-CCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 888899888888777776666655 4444544321 22 2335999999999999999444334455655555655555
Q ss_pred HHHHHHHHHH
Q 018388 321 FAACINMFIC 330 (357)
Q Consensus 321 ~~~~i~~~~~ 330 (357)
.+.++++.+.
T Consensus 317 ~~aa~~l~~p 326 (354)
T PF05631_consen 317 AVAAVSLAIP 326 (354)
T ss_pred HHHHHHHHHH
Confidence 5555554443
No 117
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.66 E-value=1.1e-17 Score=152.75 Aligned_cols=283 Identities=16% Similarity=0.238 Sum_probs=2.7
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHcc----ch--------------
Q 018388 43 LDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR----SI-------------- 104 (357)
Q Consensus 43 ~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~----~~-------------- 104 (357)
+..++++..+.|++.+.+-++..+..++..++.+|..|-|.+-.+.++.+++++++++-+ .+
T Consensus 30 ErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~ 109 (539)
T PF03137_consen 30 ERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSI 109 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccc
Confidence 447899999999999999999999999999999998777788889999999988877521 00
Q ss_pred -----------------------------hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHH
Q 018388 105 -----------------------------SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSA 155 (357)
Q Consensus 105 -----------------------------~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 155 (357)
..++.++++.++.|+ ++...++...+|+-|.+++++-+..+|+..+...+
T Consensus 110 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~Gi-G~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~l 188 (539)
T PF03137_consen 110 SSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGI-GATPLYTLGITYIDDNVSKKNSPLYIGILYAMSIL 188 (539)
T ss_dssp ------------------------------------------SS-S----------------------------------
T ss_pred ccccccccccccccCccccccccccccchHHHHHHHHHHHHHhc-cccCCccceeeeeccccccccCccchhhhhHHhhc
Confidence 124668899999999 77888899999999999999999999999999999
Q ss_pred HHHhhHhhhHHh--------------------------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCccccc
Q 018388 156 SFVCGTLAARFL--------------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIIT 209 (357)
Q Consensus 156 g~~~g~~~~~~l--------------------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 209 (357)
|..+|-++++.. .|+.-|++.+.+.++..+.. +.+|++.+..++..+..+..+
T Consensus 189 GPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl-~~FPk~lp~~~~~~~~~~~~~ 267 (539)
T PF03137_consen 189 GPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL-FFFPKKLPGTSERQEEKESSE 267 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH-HcCCccCCCcccccchhhhhh
Confidence 998887777652 24555666766655555543 445655443311100000000
Q ss_pred ccccccccCC-CCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHH
Q 018388 210 EETEGVNQNE-SNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLM 288 (357)
Q Consensus 210 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 288 (357)
...+..+.++ .+.+..+...+..+++.+..+.+.+||.+....+..........++.+++|.|++.+++.++.+++.+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~ 347 (539)
T PF03137_consen 268 RKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLT 347 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 0000000000 000000000111122223334456699999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHhhhhhccc--hhHHHHHHHHHHHHHH
Q 018388 289 LIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINM 327 (357)
Q Consensus 289 ~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~i~~ 327 (357)
....+.....+.+++|++.+|++ .|..+....+...++.
T Consensus 348 G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~ 388 (539)
T PF03137_consen 348 GIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSV 388 (539)
T ss_dssp -----------------------------------------
T ss_pred hhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHH
Confidence 88777666666699999999875 3555555555554443
No 118
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.65 E-value=1.3e-15 Score=115.52 Aligned_cols=132 Identities=22% Similarity=0.317 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCC
Q 018388 58 AIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNI 137 (357)
Q Consensus 58 ~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~ 137 (357)
+.+.++..++.++.|++.||+|||+.+..+.....++.+.....++ .+.+.+.+++.|+ +.+...+...+++.|..
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSN---ITVLIIARFLQGF-GAAFALVAGAALIADIY 80 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHhHHHHHHHHC
Confidence 3456778899999999999999999999999998888888888888 8888899999999 66777788999999999
Q ss_pred CccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhccC
Q 018388 138 SERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKD 193 (357)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e 193 (357)
|+++|++.++..+....+|..++|.+++.+ +|++.+++.+....+..+...+..||
T Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999988875 78899998887777766666665555
No 119
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.65 E-value=1.7e-14 Score=129.73 Aligned_cols=185 Identities=12% Similarity=0.085 Sum_probs=139.4
Q ss_pred hHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCcc-chhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDE-CSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
+.+.+..++............|.+.++.- .+.+. .+.+....|...++..++..++.++.|+++||+|||+++..+.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~ 289 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHEFG-RNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLV 289 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHHhc-ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 34445555554544455566677765521 01111 12344567999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcc-chhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHH-HHHHHHHHhhHhhhHHh
Q 018388 90 LSIIPLAILAYRR-SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILL-GVLSASFVCGTLAARFL 167 (357)
Q Consensus 90 ~~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l 167 (357)
+..++..+..... +....+.+++.+++.|+ +.+...+....++.|.+|+++|++++++.+ ...++|..+||.++|.+
T Consensus 290 ~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~-~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l 368 (418)
T TIGR00889 290 AWALRFGFFAYGDPEYFGYALLFLSMIVYGC-AFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVM 368 (418)
T ss_pred HHHHHHHHHHHcCcchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 9888877766643 21124566778999998 666777888899999999999999999997 67889999999999874
Q ss_pred ----------hhHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 018388 168 ----------STTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (357)
Q Consensus 168 ----------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~ 197 (357)
+|+..|.+.+++.++..++.++++||+.+.
T Consensus 369 ~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 369 VEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 388899988888888888888888877543
No 120
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.64 E-value=2.3e-14 Score=131.56 Aligned_cols=278 Identities=14% Similarity=0.201 Sum_probs=203.5
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHcc------------------ch
Q 018388 43 LDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR------------------SI 104 (357)
Q Consensus 43 ~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~------------------~~ 104 (357)
+..++++..+.|++.+.+-++..+...+..+...|..|-+.+-.+.++.+++++++++-+ +.
T Consensus 124 ErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~ 203 (735)
T KOG3626|consen 124 ERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENP 203 (735)
T ss_pred hhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCC
Confidence 345677777789999999999999999999999999999999999999999999887631 00
Q ss_pred -------------------------------hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHH
Q 018388 105 -------------------------------SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVL 153 (357)
Q Consensus 105 -------------------------------~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 153 (357)
..+..++++.++.|+ +....++...+|+-|.+.+++-+..+|+.....
T Consensus 204 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GI-G~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~ 282 (735)
T KOG3626|consen 204 SSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGI-GATPIFTLGISYIDDNVKKKNSPLYLGILYSMA 282 (735)
T ss_pred ccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhc-CCCCCccCCCccccccccccCCcHHHHHHHHHH
Confidence 023467889999999 778888999999999999999999999999999
Q ss_pred HHHHHhhHhhhHHh-----------------------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccc
Q 018388 154 SASFVCGTLAARFL-----------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITE 210 (357)
Q Consensus 154 ~~g~~~g~~~~~~l-----------------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 210 (357)
.+|.++|-+++++. .|+.-|++.+.+.++..+.. +++|+..++.+++.+.. ..
T Consensus 283 ~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~-f~fPk~lp~~~~~~~~~-~~-- 358 (735)
T KOG3626|consen 283 ILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPL-FFFPKELPKSQKRKRAR-DL-- 358 (735)
T ss_pred HhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH-HhCcccCccccccchhh-hh--
Confidence 99999998888763 35666778887777666664 45666554433210000 00
Q ss_pred cccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHH
Q 018388 211 ETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLI 290 (357)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 290 (357)
+..+.+.+..+.+....+..+++.+..+.+.+||.+....+...+......++.+++|-|++.++|.++..+..+...
T Consensus 359 --~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~ 436 (735)
T KOG3626|consen 359 --HVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGS 436 (735)
T ss_pred --cccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhh
Confidence 000000000011111111112333334446679999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHhhhhhccc--hhHHHHHHHHHHHHHH
Q 018388 291 AGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINM 327 (357)
Q Consensus 291 ~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~i~~ 327 (357)
.++.....+.+++|++.+|+. .|......++...+..
T Consensus 437 i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l 475 (735)
T KOG3626|consen 437 IGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSL 475 (735)
T ss_pred hhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHH
Confidence 888888777799999999875 3555555444444443
No 121
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.64 E-value=3.5e-14 Score=130.61 Aligned_cols=167 Identities=14% Similarity=0.105 Sum_probs=113.1
Q ss_pred HHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHH-H
Q 018388 20 WGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI-L 98 (357)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~-~ 98 (357)
...........+|.++++. .+.+....++..+...++..++.+..|+++||+|||+.+..+.+...+.... .
T Consensus 262 ~~~~~~~~~~~~p~~l~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 334 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHN-------LHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAF 334 (490)
T ss_pred HHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 3444555566788887652 2233344566777788899999999999999999999988777644433222 2
Q ss_pred --HHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-----hhHH
Q 018388 99 --AYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTS 171 (357)
Q Consensus 99 --~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-----~~~~ 171 (357)
..+++ ...+++++++.|+ ..+........++.|.+|++.|+++++.......++..++|.+.+++ +|+.
T Consensus 335 ~~~~~~~---~~~~~~~~~~~g~-~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~ 410 (490)
T PRK10642 335 ILINSNV---IGLIFAGLLMLAV-ILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMM 410 (490)
T ss_pred HHHhCCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchH
Confidence 22344 5666778888887 44445566778888999999999999975444445567778777764 3676
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCC
Q 018388 172 AFQAATIVSMLAAAYMRVFLKDDVPND 198 (357)
Q Consensus 172 ~f~~~~~~~~~~~~~~~~~~~e~~~~~ 198 (357)
+++...+.+++..+. .+++||++++.
T Consensus 411 ~~~~~~~~~~i~~~~-~~~~pes~~~~ 436 (490)
T PRK10642 411 PAYYLMVVAVIGLIT-GVTMKETANRP 436 (490)
T ss_pred HHHHHHHHHHHHHHH-HHHhccccCCC
Confidence 666665555554444 44579987754
No 122
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.61 E-value=9.9e-14 Score=131.01 Aligned_cols=139 Identities=23% Similarity=0.134 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHH
Q 018388 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132 (357)
Q Consensus 53 ~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~ 132 (357)
..+...+..++.+++.++.|+++||+|||++++.+.++.+++.++.++.++ ...+++.+++.|+ ..+...+...++
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s---~~~ll~~~~l~g~-~~~~~~~~~~a~ 672 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNS---ESAMIALLCLFGG-LSIAAWNALDVL 672 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 455567778899999999999999999999999999999999998888887 6667777888887 445566889999
Q ss_pred HhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh---hhHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 018388 133 VADNISERQRASAFGILLGVLSASFVCGTLAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (357)
Q Consensus 133 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 196 (357)
++|++|.++|++++|+......+|.++||.+++.+ +...+|++.+++.++..++ ..++||+..
T Consensus 673 ~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll-~~~LPET~~ 738 (742)
T TIGR01299 673 TVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLL-ALKLPDTRG 738 (742)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-HHhCCCCcc
Confidence 99999999999999999999999999999998865 3356777777765555444 345687653
No 123
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.61 E-value=7.3e-13 Score=114.06 Aligned_cols=279 Identities=13% Similarity=0.001 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccch---hHHH--HHHHHHHHhhhcccc
Q 018388 49 AIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI---SFFY--AYYALRTLTAMVCEG 123 (357)
Q Consensus 49 s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~r~l~G~~~~~ 123 (357)
+....-|...+|.+.+....+++-|+.|++|-|...+++..+..++..+-..+..+ +.++ ....+..+.+. +..
T Consensus 77 s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~-Aq~ 155 (480)
T KOG2563|consen 77 SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAA-AQP 155 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHH-hhh
Confidence 34455788889999999999999999999999999999999999999988777543 3344 66778888887 656
Q ss_pred hHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----------hhHH--HHHHHHHHHHHHHHHHHHhc
Q 018388 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----------STTS--AFQAATIVSMLAAAYMRVFL 191 (357)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----------~~~~--~f~~~~~~~~~~~~~~~~~~ 191 (357)
++...-.....-|++++||..+...-.+++.+|..+|-++...+ .|.. .|+....+..+.+++..+..
T Consensus 156 Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~ 235 (480)
T KOG2563|consen 156 FILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVF 235 (480)
T ss_pred HhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66544456677889999999999888888777777765554432 3432 45545555444444444555
Q ss_pred cCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHH
Q 018388 192 KDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLY 271 (357)
Q Consensus 192 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
++.|+.++.. .... .+..+..+..+..++++++....+++......+.+..+.+..
T Consensus 236 ~~~P~tPps~-----------------------s~~~-~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~ 291 (480)
T KOG2563|consen 236 TKKPPTPPSA-----------------------SQAA-LQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNL 291 (480)
T ss_pred CCCCCCCCch-----------------------hHhh-hhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhh
Confidence 5544333221 0000 001123333444556888888777777766666666666655
Q ss_pred hhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccch-hHHHHHHHHHHHHHH-HHHHhcC---cchHHHH-HHHH
Q 018388 272 FLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE-AKLLSLGLFAACINM-FICSISW---SAWVPYA-TTAF 345 (357)
Q Consensus 272 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~i~~-~~~~~~~---~~~~~~~-~~~~ 345 (357)
-+... |++...+|+......+.+++++ .+.|.+.||.++ |.++++......++. .+..... +.+.++. ..++
T Consensus 292 ~l~~s-gY~~~~aG~ig~l~iv~Gmlga-~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~ 369 (480)
T KOG2563|consen 292 ALCPS-GYEGVFAGYIGALMIVAGMLGA-LASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLL 369 (480)
T ss_pred ccccc-cCCccccchhHHHHHHHHHHHH-HHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHH
Confidence 55554 7777888999999999999998 888999999876 555555555555552 2222221 2223333 4555
Q ss_pred HHhhhcccc
Q 018388 346 SVLVVFATP 354 (357)
Q Consensus 346 ~~~~~~~~p 354 (357)
|.......|
T Consensus 370 g~~~~~~~P 378 (480)
T KOG2563|consen 370 GFFGTGYLP 378 (480)
T ss_pred HHhhcCCCC
Confidence 655555454
No 124
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.58 E-value=2e-13 Score=122.95 Aligned_cols=170 Identities=19% Similarity=0.253 Sum_probs=132.5
Q ss_pred HHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHH
Q 018388 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLA 96 (357)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~ 96 (357)
.+..........+.+|.+..+..+ +.+......|.+.++..++..++.+..|+++||+|||+.+..+.....++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 303 (408)
T PRK09874 228 TLIIQVATGSIAPILTLYVRELAG----NVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLI 303 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH
Confidence 334444555566777877776321 1111123457777788888899999999999999999999998888877777
Q ss_pred HHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHH
Q 018388 97 ILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSA 172 (357)
Q Consensus 97 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~ 172 (357)
.....++ .+.+.+.+++.|+ +.+...+...+.+.+..|+++|++.++..+....+|..+||.++|.+ +|++.
T Consensus 304 ~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~ 379 (408)
T PRK09874 304 PMSFVQT---PLQLGILRFLLGA-ADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAV 379 (408)
T ss_pred HHHHhcc---HHHHHHHHHHHHh-hhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHH
Confidence 7777777 6777888999998 66777788888999999999999999999999999999999999876 78999
Q ss_pred HHHHHHHHHHHHHHHHHhccCC
Q 018388 173 FQAATIVSMLAAAYMRVFLKDD 194 (357)
Q Consensus 173 f~~~~~~~~~~~~~~~~~~~e~ 194 (357)
|++.+++.++..+..++..+++
T Consensus 380 f~~~~~~~l~~~~~~~~~~~~~ 401 (408)
T PRK09874 380 FLVTAGVVLFNAVYSWNSLRRR 401 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999888777766665544433
No 125
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.58 E-value=5.3e-14 Score=127.09 Aligned_cols=164 Identities=12% Similarity=0.036 Sum_probs=126.9
Q ss_pred HhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccch
Q 018388 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI 104 (357)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~ 104 (357)
.......|.+..+... +.+.+..+.|++.++..+...++.++.|+++||+|||+.+..+.++..++..+.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~- 314 (420)
T PRK09528 240 DVFDQQFPNFFASFFA----TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATG- 314 (420)
T ss_pred HHHHHHHHHHHHHHHh----ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhccc-
Confidence 3333346666655321 11334456799999999999999999999999999999999999988888888888888
Q ss_pred hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHH-HHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHH
Q 018388 105 SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGI-LLGVLSASFVCGTLAARFL----STTSAFQAATIV 179 (357)
Q Consensus 105 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~ 179 (357)
.+.+++.+++.|+ ..+...+....++.|..|++.|+...+. .+....+|..+||.+.|++ ||+..|...+++
T Consensus 315 --~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~ 391 (420)
T PRK09528 315 --PLEVSILKLLHAF-EVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGI 391 (420)
T ss_pred --HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHH
Confidence 7777888999998 6566656777899999999988887655 5677889999999888875 889999988888
Q ss_pred HHHHHHHHHHhccCCCC
Q 018388 180 SMLAAAYMRVFLKDDVP 196 (357)
Q Consensus 180 ~~~~~~~~~~~~~e~~~ 196 (357)
.++..++.++..+++++
T Consensus 392 ~~i~~~~~~~~~~~~~~ 408 (420)
T PRK09528 392 VLLFTLISVFTLSGDRE 408 (420)
T ss_pred HHHHHHHHHHHhcCCch
Confidence 77666665665555443
No 126
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.54 E-value=1.1e-12 Score=117.52 Aligned_cols=163 Identities=14% Similarity=0.149 Sum_probs=117.9
Q ss_pred HHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHH
Q 018388 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (357)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~ 97 (357)
+.............|.+.++. .+.+..+.|++.+...+...++.++.|+++||+|||+.+..+.....+....
T Consensus 226 ~~~~~~~~~~~~~~p~~l~~~-------~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~ 298 (393)
T PRK15011 226 TLMWGTNSLYIINMPLFIINE-------LHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAG 298 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 333334444555678777652 3444556677777777778888999999999999999888776665555544
Q ss_pred HHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHH
Q 018388 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAF 173 (357)
Q Consensus 98 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f 173 (357)
....++ .+.+++.+++.++ ..+...+....+..|..| ++|+++++.++....+|..+||.++|.+ +|+..|
T Consensus 299 ~~~~~~---~~~~l~~~~l~~~-~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~ 373 (393)
T PRK15011 299 MLMAHS---PAILLGLQLLNAI-YIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVF 373 (393)
T ss_pred HHHHhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 445566 6666778888777 555555667777889887 4689999999888999999999888875 788888
Q ss_pred HHHHHHHHHHHHHHHHhccC
Q 018388 174 QAATIVSMLAAAYMRVFLKD 193 (357)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~e 193 (357)
++.+++.++..+.. +..||
T Consensus 374 ~~~~~~~~~~~~~~-~~~~~ 392 (393)
T PRK15011 374 WFALVMIIATLFCL-LRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHH-HhhcC
Confidence 88777766554443 44554
No 127
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.53 E-value=1.3e-12 Score=117.25 Aligned_cols=159 Identities=17% Similarity=0.124 Sum_probs=121.7
Q ss_pred HHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHH
Q 018388 20 WGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA 99 (357)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~ 99 (357)
..++.......+|.+..+. +.+ ..++..+.+.++..++.++.|++.||+|||+.+..+..+..++..+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 297 (399)
T PRK05122 228 ASIGFGTIATFITLYYAAR--------GWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLW 297 (399)
T ss_pred HHHHHHHHHHHHHHHHHHc--------ccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 3444445555666666541 111 225556677888889999999999999999999988888888887877
Q ss_pred HccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHH
Q 018388 100 YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQA 175 (357)
Q Consensus 100 ~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~ 175 (357)
..++ .+.+++.+++.|+ +.+...+.......|..|+|+|+++.++++....+|..++|.+.|.+ +|++.|++
T Consensus 298 ~~~~---~~~~~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 373 (399)
T PRK05122 298 LAPS---PWMALIGAALTGF-GFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLA 373 (399)
T ss_pred Hhcc---HHHHHHHHHHHHH-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 7777 6667788899998 66666677778888999999999999999999999998888777765 78999998
Q ss_pred HHHHHHHHHHHHHHhccC
Q 018388 176 ATIVSMLAAAYMRVFLKD 193 (357)
Q Consensus 176 ~~~~~~~~~~~~~~~~~e 193 (357)
.+.+.++..+..++ +++
T Consensus 374 ~~~~~~~~~~~~~~-~~~ 390 (399)
T PRK05122 374 AALAALLGLALTWL-LYR 390 (399)
T ss_pred HHHHHHHHHHHHHH-hcc
Confidence 88776666555444 444
No 128
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.52 E-value=7.1e-13 Score=116.54 Aligned_cols=168 Identities=23% Similarity=0.240 Sum_probs=141.6
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcch-hhhHH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA-MLTLP 87 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~-~l~~~ 87 (357)
.++...+..+.............|.+.++. .+.+..+.++..+...++..++.++.|++.||+|||+ .+..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 248 (352)
T cd06174 176 LLLLLALAFFLLSFGYYGLLTYLPLYLQEV-------LGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIG 248 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 344555556666667777777888887652 2445567799999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
..+..++.......++ .+...+..++.|+ +.+...+...+++.|..|+|+|++.++..+....+|..++|.+.+.+
T Consensus 249 ~~~~~i~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l 324 (352)
T cd06174 249 LLLAALGLLLLALAPS---LALLLVALLLLGF-GLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLL 324 (352)
T ss_pred HHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888 7788899999999 66777789999999999999999999999999999999999998875
Q ss_pred ----hhHHHHHHHHHHHHHHHHHH
Q 018388 168 ----STTSAFQAATIVSMLAAAYM 187 (357)
Q Consensus 168 ----~~~~~f~~~~~~~~~~~~~~ 187 (357)
+|+..+++.+++.++..+..
T Consensus 325 ~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 325 LDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred hcccCcchHHHHHHHHHHHHHHHh
Confidence 78899998888876665543
No 129
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.51 E-value=1.3e-12 Score=117.64 Aligned_cols=160 Identities=19% Similarity=0.147 Sum_probs=119.2
Q ss_pred HHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHH
Q 018388 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (357)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~ 97 (357)
+............+|.+.++ .+.+....|...+...++..++.++.|+++||+|||+.+..+.+...++..+
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~--------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 301 (406)
T PRK11551 230 FFTLIVLYFLLNWLPSLLVG--------QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAA 301 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHh--------CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 33333334444456777653 2344456688888999999999999999999999999988877777777666
Q ss_pred HHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-----hhHHH
Q 018388 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSA 172 (357)
Q Consensus 98 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-----~~~~~ 172 (357)
....++ .+.+.+..++.|+ ..+...+...++..|.+|+++|++.+++.+....+|..+||.++|.+ +|...
T Consensus 302 ~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~ 377 (406)
T PRK11551 302 LAAAPS---FAGMLLAGFAAGL-FVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGV 377 (406)
T ss_pred HHhcCc---HHHHHHHHHHHHH-HHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHH
Confidence 666776 6666677777887 44455678889999999999999999999999999999999999886 34555
Q ss_pred HHHHHHHHHHHHHHHHH
Q 018388 173 FQAATIVSMLAAAYMRV 189 (357)
Q Consensus 173 f~~~~~~~~~~~~~~~~ 189 (357)
++......++..++.++
T Consensus 378 ~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 378 IGASIPVILVAALAALL 394 (406)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66555554444444443
No 130
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.51 E-value=1.7e-12 Score=117.23 Aligned_cols=161 Identities=10% Similarity=0.025 Sum_probs=125.7
Q ss_pred hHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhH
Q 018388 27 VVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISF 106 (357)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~ 106 (357)
....+|.+.++ ..+.+....|++.+...++..++.++.+++.||.++++.+..+.++..++.++..+.++
T Consensus 242 ~~~~~p~~~~~-------~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--- 311 (417)
T PRK10489 242 VRVLYPALADE-------VWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPM--- 311 (417)
T ss_pred HHHhhHHHHHh-------ccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccch---
Confidence 34566777764 23445566799999999999999999999999988888888888888888777777777
Q ss_pred HHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHHHHH
Q 018388 107 FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSML 182 (357)
Q Consensus 107 ~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~~~~ 182 (357)
.+...++.++.|+ +.+...+...+++.|..|+|+|++++++......+|..+||.+.|.+ +.+..++..+....+
T Consensus 312 ~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~ 390 (417)
T PRK10489 312 WILAVLCLALFGY-LSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLI 390 (417)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHH
Confidence 6666778888888 55666667788999999999999999999999999999999998876 556677777666566
Q ss_pred HHHHHHHhccCCCCCC
Q 018388 183 AAAYMRVFLKDDVPND 198 (357)
Q Consensus 183 ~~~~~~~~~~e~~~~~ 198 (357)
..+.....+||.++.+
T Consensus 391 ~~~~~~~~~~~~~~~~ 406 (417)
T PRK10489 391 IGVLLLLVLGELRRFR 406 (417)
T ss_pred HHHHHHHhcccccccc
Confidence 5555566667655433
No 131
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.51 E-value=2.7e-13 Score=123.51 Aligned_cols=165 Identities=14% Similarity=0.135 Sum_probs=123.8
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc--CcchhhhH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY--GRKAMLTL 86 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~--Grk~~l~~ 86 (357)
.++......++..++.......+|.|.++ .+.+....|++.++..++..++.++.|+++||. ++|+...+
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 313 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAKD--------KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLF 313 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHH
Confidence 34555555566666655556677777653 244556778899999999999999999999984 34433333
Q ss_pred --HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhh
Q 018388 87 --PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (357)
Q Consensus 87 --~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 164 (357)
+.+..+++.++....++ ++.+++.+++.|+ +.+...+...+++.|.+|++++++.+++++....+|..+||.++
T Consensus 314 ~~~~~~~~l~~ll~~~~~~---~~~~~i~~~~~G~-~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~ 389 (455)
T TIGR00892 314 SFALLFNGLTHLLCALAGD---YTGLVIYCIFFGL-SFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLA 389 (455)
T ss_pred HHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHH-HhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccce
Confidence 33434444555566777 7778889999999 66777788899999999999999999999999999999999999
Q ss_pred HHh-----hhHHHHHHHHHHHHHHHH
Q 018388 165 RFL-----STTSAFQAATIVSMLAAA 185 (357)
Q Consensus 165 ~~l-----~~~~~f~~~~~~~~~~~~ 185 (357)
|.+ +|++.|++.+++.++..+
T Consensus 390 G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 390 GRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred eeeehhcCCcchHHHHhhHHHHHHHH
Confidence 875 488888888776555443
No 132
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.49 E-value=2.5e-11 Score=106.44 Aligned_cols=173 Identities=13% Similarity=0.087 Sum_probs=140.5
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-Ccchhhh
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLT 85 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-Grk~~l~ 85 (357)
.|.++.+....+-..++++-+-..+-.|+.....++ ++.+...+.-+.+.|..-.-+...++|+++||+ |+|+.+.
T Consensus 20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~g---Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDG---LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc---CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 567888899999999999888888888888755432 556666666666777766678889999999995 9999999
Q ss_pred HHHHHHHHHHHHHHHcc--chhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccc--hhHHHHHHHHHHHHHHHhhH
Q 018388 86 LPLTLSIIPLAILAYRR--SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ--RASAFGILLGVLSASFVCGT 161 (357)
Q Consensus 86 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~ 161 (357)
.+.++..+|.++.+.+. + ...++++-.+.++ +.|.+-+...+++.|.+|++| |-..++++.++.++|..++|
T Consensus 97 lGail~~iGh~~L~~~~~~~---~~gl~i~L~~I~i-G~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p 172 (498)
T COG3104 97 LGAILMAIGHLVLAISSVSG---PGGLYIGLALIIV-GTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAP 172 (498)
T ss_pred HHHHHHHHHHHHHhcccccc---ccHHHHHHHHHHh-ccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHH
Confidence 99999999999999884 5 5667788888888 788898999999999998654 66778888888999999999
Q ss_pred hhhHHh----hhHHHHHHHHHHHHHHHHH
Q 018388 162 LAARFL----STTSAFQAATIVSMLAAAY 186 (357)
Q Consensus 162 ~~~~~l----~~~~~f~~~~~~~~~~~~~ 186 (357)
.+.+++ +|+..|...++-..+.++.
T Consensus 173 ~i~~~~~~~~g~~~gF~~aavGm~~gl~~ 201 (498)
T COG3104 173 IITGLLAINYGWHVGFGLAAVGMIIGLVI 201 (498)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 888876 7888888887665554444
No 133
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.49 E-value=9e-13 Score=117.14 Aligned_cols=164 Identities=16% Similarity=0.208 Sum_probs=121.7
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
++......+...+.........+.+.++ .+.+..+.+...+...++..++.++.|+++||+|||+.+..+.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 278 (377)
T TIGR00890 207 FWVLYLSFFLNAVSGLLLIGLYKPYGQS--------LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFG 278 (377)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH
Confidence 3344444444444444444455555443 23444567888899999999999999999999999999999988
Q ss_pred HHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh--
Q 018388 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-- 167 (357)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-- 167 (357)
...++.....+.++.. ...++...++.|+ ..+...+...+++.|.+|+|+|+++.++.+....+|..++|.+.+.+
T Consensus 279 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~-~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 356 (377)
T TIGR00890 279 ISAVGMAAMLFIPMLN-DVLFLATVALVFF-TWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT 356 (377)
T ss_pred HHHHHHHHHHHcccch-hHHHHHHHHHHHH-HhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888887777766421 2234455677777 44555567788899999999999999999999999999999988875
Q ss_pred --hhHHHHHHHHHHHHHH
Q 018388 168 --STTSAFQAATIVSMLA 183 (357)
Q Consensus 168 --~~~~~f~~~~~~~~~~ 183 (357)
||++.|.+.+++.++.
T Consensus 357 ~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 357 EIGFEYTFIVTGAFALTS 374 (377)
T ss_pred hhchhhHHHHHHHHHHHh
Confidence 7898888887765543
No 134
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.49 E-value=2.2e-12 Score=119.28 Aligned_cols=144 Identities=14% Similarity=0.118 Sum_probs=105.2
Q ss_pred hHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhH
Q 018388 27 VVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISF 106 (357)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~ 106 (357)
....+|.+.++ +.+.+..+.|++.+...++..++.++.|+++||+|||+++..+..+..+..+......+..
T Consensus 294 ~~~~lp~~l~~-------~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~- 365 (496)
T PRK03893 294 IQALLPTYLKT-------DLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGAN- 365 (496)
T ss_pred HHHHHHHHHHh-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccH-
Confidence 34567888754 3355566789999999999999999999999999999998888776666555444333211
Q ss_pred HHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHH
Q 018388 107 FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIV 179 (357)
Q Consensus 107 ~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~ 179 (357)
.+...+..++.+..+.+. .+...+++.|.+|+++|++.+++......+|..+||.++|.+ +|+..+...+..
T Consensus 366 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 366 VWVLGLLLFFQQMLGQGI-SGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFS 441 (496)
T ss_pred HHHHHHHHHHHHHHhccc-chhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHH
Confidence 333444445444423233 356777889999999999999999999999999999998876 677666554433
No 135
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.48 E-value=3.6e-12 Score=113.62 Aligned_cols=164 Identities=14% Similarity=0.090 Sum_probs=135.0
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++.++...+..++...+........|.+.+| .+.+..+.|++.+...++..+..+..+++.||+|+|+.+.+
T Consensus 204 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~--------~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~ 275 (382)
T TIGR00902 204 NPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA--------AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLI 275 (382)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHH
Confidence 3445666666777777777777788888864 34555677888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHH-HHHHHHHHhhHhhhH
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILL-GVLSASFVCGTLAAR 165 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~ 165 (357)
+.+...+.....+++++ .+.+++.+++.|+ ..+...+....++.+. |+++|++..++++ ...++|..+||.++|
T Consensus 276 ~~~~~~~~~~~~~~~~~---~~~~~~~q~l~g~-~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G 350 (382)
T TIGR00902 276 SAIACVGRWAIIGAIEA---FPLIFLLQILHCG-TFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAG 350 (382)
T ss_pred HHHHHHHHHHHHHhHhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888 8888999999999 7788889999999998 9999999999986 577899999999999
Q ss_pred Hh----hhHHHHHHHHHHHHHHH
Q 018388 166 FL----STTSAFQAATIVSMLAA 184 (357)
Q Consensus 166 ~l----~~~~~f~~~~~~~~~~~ 184 (357)
++ ++ ..|+..+.+.++..
T Consensus 351 ~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 351 FIYPTLGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHhccH-HHHHHHHHHHHHHH
Confidence 87 43 45666666655443
No 136
>PRK12382 putative transporter; Provisional
Probab=99.48 E-value=4.5e-12 Score=113.48 Aligned_cols=159 Identities=18% Similarity=0.182 Sum_probs=124.0
Q ss_pred HHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHH
Q 018388 19 LWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAIL 98 (357)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~ 98 (357)
+...+........|.+.++. +.+ ..++..+.+.++..++.++.|++.||+|||+.+..+..+..++..+.
T Consensus 227 l~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~ 296 (392)
T PRK12382 227 LQGVGFAVIGTFVSLYFASK--------GWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLL 296 (392)
T ss_pred HHHHHHhHHHHHHHHHHHhc--------CCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHH
Confidence 33344445556666666542 111 12555666788888999999999999999999999998888888888
Q ss_pred HHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHH
Q 018388 99 AYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQ 174 (357)
Q Consensus 99 ~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~ 174 (357)
.+.++ .+...+..++.|+ +.+...+...+.+.|..|+|+|+++.++.+....+|..+||.+++.+ ||++.|.
T Consensus 297 ~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~ 372 (392)
T PRK12382 297 WLAPT---AWVALAGAALTGA-GCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFL 372 (392)
T ss_pred HHccc---HHHHHHHHHHHHH-HHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHH
Confidence 77777 6677788899998 66666677888889999999999999999999999999999888875 7899999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 018388 175 AATIVSMLAAAYMRVFL 191 (357)
Q Consensus 175 ~~~~~~~~~~~~~~~~~ 191 (357)
+.+.+.++..+..++..
T Consensus 373 ~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 373 AGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 98887776666555443
No 137
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.47 E-value=4e-12 Score=113.11 Aligned_cols=170 Identities=16% Similarity=0.226 Sum_probs=121.9
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
+..+....++...........+|.+.++. .+.+..+.|++.+.......++.++.|++.||+|||+.+..+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~ 273 (375)
T TIGR00899 201 TRLLFVACTLMWGCNILYIINMPLLIIHE-------LGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAAL 273 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHH
Confidence 33333444444443444455567776552 23444566777777777777888999999999999999888777
Q ss_pred HHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh--
Q 018388 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-- 167 (357)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-- 167 (357)
...+........++ .+.+.+.+++.|+ +.+...+....++.|..|+ +|+++++..+....+|..+||.+++.+
T Consensus 274 ~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~ 348 (375)
T TIGR00899 274 AGVAFYTGLAADNS---LWALLMLQLLNAI-FIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAE 348 (375)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666555555566 6667778888888 5566667888888998875 567999999999999999999988875
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHhcc
Q 018388 168 --STTSAFQAATIVSMLAAAYMRVFLK 192 (357)
Q Consensus 168 --~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (357)
+|+..|++.+++.++..+.. ..++
T Consensus 349 ~~g~~~~~~~~~~~~~~~~~~~-~~~~ 374 (375)
T TIGR00899 349 RWSYHAVYWFAIVMLIVALFCL-LLIK 374 (375)
T ss_pred hccchhHHHHHHHHHHHHHHHH-heec
Confidence 78889988887766555443 3344
No 138
>PRK03545 putative arabinose transporter; Provisional
Probab=99.47 E-value=6.4e-12 Score=112.44 Aligned_cols=167 Identities=12% Similarity=0.137 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHH
Q 018388 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (357)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~ 92 (357)
.....++...........++.+.++. .+.+....|++.+...++..++.++.|+++||+|||+... +..+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~l~~~-------~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~ 281 (390)
T PRK03545 210 LYLLTVVVVTAHFTAYSYIEPFVQQV-------AGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLL 281 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHH
Confidence 33333333333333344556666542 2334456688888889999999999999999999887544 433333
Q ss_pred HHH-HHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----
Q 018388 93 IPL-AILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL---- 167 (357)
Q Consensus 93 ~~~-~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l---- 167 (357)
++. ......++ .+.+.+..++.|+ +.+...+...+.+.|..| ++|+++++..+....+|..+||.++|.+
T Consensus 282 ~~~~~l~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~ 356 (390)
T PRK03545 282 VCLLLLLPAANS---EWHLSVLSIFWGI-AIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL 356 (390)
T ss_pred HHHHHHHHHhch---HHHHHHHHHHHHH-HHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 333 33344555 6667778888888 444444567777888766 6889999999999999999999998875
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcc
Q 018388 168 STTSAFQAATIVSMLAAAYMRVFLK 192 (357)
Q Consensus 168 ~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (357)
+++..|+..+.+.++..+..+...+
T Consensus 357 g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 357 GLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 7899999998887776666655543
No 139
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.47 E-value=8.5e-10 Score=96.08 Aligned_cols=276 Identities=13% Similarity=0.051 Sum_probs=174.8
Q ss_pred HHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCc
Q 018388 60 IGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE 139 (357)
Q Consensus 60 ~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~ 139 (357)
..-.++...++...+.|..+.|++++++.+...+...+..+.++ ...+-+..+..|+ ..+.. .+..+++-...|+
T Consensus 50 ~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~s---v~~mq~~q~~yg~-~~a~e-vay~sYiys~v~~ 124 (412)
T PF01770_consen 50 WTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTS---VLAMQLMQFFYGL-ATAAE-VAYYSYIYSVVDK 124 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCc---HHHHHHHHHHHHH-HHHHH-HHHHHHheeecCH
Confidence 34556777889999999999999999999999999999999999 8999999999999 54554 6888999999999
Q ss_pred cchhHHHHHHHHHHHHHHHhhHhhhHHh------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCC---CCCCCcccccc
Q 018388 140 RQRASAFGILLGVLSASFVCGTLAARFL------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDD---DDDLTRPIITE 210 (357)
Q Consensus 140 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~---~~~~~~~~~~~ 210 (357)
++-.++.+...++.-+|..++.++|..+ +.+...++......++ .+..+++|.+++..- +..+..+..+.
T Consensus 125 ~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a-~~~~~fLP~~~~S~~f~r~~~~~~~~~~~ 203 (412)
T PF01770_consen 125 EHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLA-LLIALFLPMPKRSLFFHRKPPAEQDANES 203 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HHHHHHcCCCCcccceeccCccccccccc
Confidence 9999999999999999999988888775 3455555554443333 333456777654311 11110010000
Q ss_pred cccccccCCCC-----CCCCccccccchhHHHHHHh---hhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhh--cccC
Q 018388 211 ETEGVNQNESN-----SPVKIPVCKKIPSIRDLICL---LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFN 280 (357)
Q Consensus 211 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~ 280 (357)
..++.++..++ ++...........++..++. ..++|.++...+-..+...++..+.++.....++. -+-+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~ 283 (412)
T PF01770_consen 204 ESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNE 283 (412)
T ss_pred cccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCC
Confidence 00000000000 00111111111122222222 33577776666666666666666666666555544 2333
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHH--HHHHHHHHHHHHHHHhcCcchHHHHH
Q 018388 281 KNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL--SLGLFAACINMFICSISWSAWVPYAT 342 (357)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~ 342 (357)
....|.+-+...+.+.++. +..|++..++.+..-+ .....+.+..++++...++.|..+..
T Consensus 284 ~vYNG~VeA~~tllgA~~a-l~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~ 346 (412)
T PF01770_consen 284 SVYNGAVEAASTLLGAIAA-LLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAG 346 (412)
T ss_pred cccchHHHHHHHHHHHHHH-HHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 4446888888888888888 8888886666553333 33344445556667778888777764
No 140
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.46 E-value=5e-12 Score=115.76 Aligned_cols=169 Identities=15% Similarity=0.063 Sum_probs=115.2
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
.++...+..++...........+|.|.++ +.+.+..+.++..+...++..++.+..|+++||+|||+.+....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~-------~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~ 331 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQ-------ELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACI 331 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHH
Confidence 34455555555555555556678888865 34555667788888899999999999999999999998876654
Q ss_pred HHHHHHHHHH--HHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHH-HHHhhHhhhH
Q 018388 89 TLSIIPLAIL--AYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSA-SFVCGTLAAR 165 (357)
Q Consensus 89 ~~~~~~~~~~--~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~ 165 (357)
....++.... ...++ .+...+.+++.|+...+.. ........|..|+|+|+++.|+.+....+ |..++|.+.|
T Consensus 332 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G 407 (467)
T PRK09556 332 ALALIIFTLGVYQHATS---EYMYLASLFALGFLVFGPQ-LLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLG 407 (467)
T ss_pred HHHHHHHHHHHHHhcCc---HHHHHHHHHHHHHHHhhHH-HHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHH
Confidence 4443332222 22344 5556677788886232332 23346677999999999999999888886 6677776665
Q ss_pred Hh----------------hhHHHHHHHHHHHHHHHHHHH
Q 018388 166 FL----------------STTSAFQAATIVSMLAAAYMR 188 (357)
Q Consensus 166 ~l----------------~~~~~f~~~~~~~~~~~~~~~ 188 (357)
++ +|+..|++..+..++..+...
T Consensus 408 ~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 408 MIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 54 378888887666555544433
No 141
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.45 E-value=1.2e-13 Score=111.54 Aligned_cols=259 Identities=9% Similarity=0.007 Sum_probs=166.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-cCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchH
Q 018388 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSI 125 (357)
Q Consensus 47 ~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 125 (357)
++......++.++|+....+...+.|++.|| +|.|..-++-+....++.++++.-.-.+.+|.+..+|++.|+++.+..
T Consensus 75 ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlA 154 (459)
T KOG4686|consen 75 NIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLA 154 (459)
T ss_pred ccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhh
Confidence 4444455778888999999999999999997 677766555555556676666654333339999999999999554444
Q ss_pred HHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhh----HhhhHHhhh------HH---HHHHHHHH-HHHHHHHHH-Hh
Q 018388 126 NCLALAYVADNISERQRASAFGILLGVLSASFVCG----TLAARFLST------TS---AFQAATIV-SMLAAAYMR-VF 190 (357)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g----~~~~~~l~~------~~---~f~~~~~~-~~~~~~~~~-~~ 190 (357)
.+...++..++..||.+.++|+......+|..+- |.+....+- +. ........ +....++.. .-
T Consensus 155 -VaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg 233 (459)
T KOG4686|consen 155 -VAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLG 233 (459)
T ss_pred -hhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6788999999999999999999999888886554 333222211 00 11111111 111111111 11
Q ss_pred ccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHH
Q 018388 191 LKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFL 270 (357)
Q Consensus 191 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
.-|+..++.-+ .+ +.+. .+..+..+.++ -.|.+|...+.++++.....-+...-|
T Consensus 234 ~~D~rAerilh---------------~e--~g~~--Ge~pkLtdv~~------f~ppfw~~~iicv~yyva~fPFi~lg~ 288 (459)
T KOG4686|consen 234 LSDDRAERILH---------------LE--EGFL--GEEPKLTDVNT------FYPPFWVLVIICVLYYVAWFPFITLGP 288 (459)
T ss_pred hhhhHHHHHHh---------------hh--cCcc--cCCcccccccc------cCccHHHHHHHHHHHHHHHHHHhhhhH
Confidence 11111111100 00 0000 00011111122 257889999999999999999999999
Q ss_pred HhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHH-HHHHHHHHHh
Q 018388 271 YFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA-ACINMFICSI 332 (357)
Q Consensus 271 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~i~~~~~~~ 332 (357)
.+.++++|+|+.+++.+.+..-....+.. .+.|.++||.|++-..+.+..+ ...+-..+.+
T Consensus 289 ~fF~~rfGlS~~~a~~i~s~vy~Isav~s-pvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F 350 (459)
T KOG4686|consen 289 MFFQKRFGLSAVSAGNILSTVYGISAVLS-PVFGAISDKYGFNLWWVASACILTLLGHSGLFF 350 (459)
T ss_pred HHHHHhhCCChhhccchhhhhhhhhhhhh-hhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh
Confidence 99999999999999999988888888877 6779999999987665555444 3344444433
No 142
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.45 E-value=1.2e-11 Score=110.25 Aligned_cols=154 Identities=15% Similarity=0.127 Sum_probs=114.0
Q ss_pred HHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHH
Q 018388 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLA 96 (357)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~ 96 (357)
.+............+|.+.++ .+.+....|+..+...++..++.++.|++.||+|+|+.+..+.....++..
T Consensus 209 ~~~~~~~~~~~~~~lp~~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~ 280 (381)
T PRK03633 209 CIISGIVLGSLYGLMPLYLNH--------QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSI 280 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 333333444445567877764 244445668888889999999999999999999999999888777776654
Q ss_pred HHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHH
Q 018388 97 ILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSA 172 (357)
Q Consensus 97 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~ 172 (357)
... +. .......++.|+ +.....|...+.+.|..|+++++...+......++|..+||.++|.+ +|++.
T Consensus 281 ~~~--~~----~~~~~~~~l~g~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~ 353 (381)
T PRK03633 281 AML--SQ----AAMAPALFILGA-AGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLL 353 (381)
T ss_pred HHh--hh----HHHHHHHHHHHH-HHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHH
Confidence 432 22 223345667777 44556688999999999988888888888888999999999999886 68888
Q ss_pred HHHHHHHHHHHHH
Q 018388 173 FQAATIVSMLAAA 185 (357)
Q Consensus 173 f~~~~~~~~~~~~ 185 (357)
|.+.+.+.++..+
T Consensus 354 f~~~~~~~l~~~~ 366 (381)
T PRK03633 354 FIMIASVSFIYLL 366 (381)
T ss_pred HHHHHHHHHHHHH
Confidence 8888777655443
No 143
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.44 E-value=2.3e-11 Score=111.24 Aligned_cols=166 Identities=19% Similarity=0.188 Sum_probs=130.7
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
+..+....++..+....+...+|.+.++. ++.+....|++.+..++|.+++++..+++.+|+++++.+..+.+
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~-------l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~ 292 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDV-------LGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASL 292 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHH-------hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHH
Confidence 33334444444455455566788888763 34445567999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh--
Q 018388 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-- 167 (357)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-- 167 (357)
..+++.+..+++++ .+...+.-++.|+ +.....+...+.+.+..|++.|||.++++++....+..+|..+.|.+
T Consensus 293 ~~a~~~~~lal~~~---~~~~~~~l~l~G~-~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 293 LFALALLLLALSPS---FWLALIALFLAGA-AWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD 368 (524)
T ss_pred HHHHHHHHHhcchH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 8888888889998 66666677888999999999999999999999888888888887775
Q ss_pred --hhHHHHHHHHHHHHHHHHH
Q 018388 168 --STTSAFQAATIVSMLAAAY 186 (357)
Q Consensus 168 --~~~~~f~~~~~~~~~~~~~ 186 (357)
|-+..+.+.++..++..++
T Consensus 369 ~~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 369 HFGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HhCHHHHHHHHHHHHHHHHHH
Confidence 5566777666554444333
No 144
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.44 E-value=1.7e-11 Score=109.62 Aligned_cols=178 Identities=12% Similarity=0.047 Sum_probs=125.3
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
..+.+.+..++...+.......+|.+.++ .+.+..+.|...+.+.++..++.+..|++.||+|||+.+..+.
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~lp~~l~~--------~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~ 277 (393)
T PRK09705 206 RAWTLGVYFGLINGGYASLIAWLPAFYIE--------IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLAL 277 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHH
Confidence 34444455555555666666677888764 2445566788999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCC-ccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
.+..++..+....++. ..... -++.|+ +.+...+.......+..+ +|+|++..+..+....++..+||.+.|++
T Consensus 278 ~l~~~~~~~~~~~~~~--~~~~~--~~l~g~-g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l 352 (393)
T PRK09705 278 VLQLVGFCGFIWLPLQ--LPVLW--AMVCGL-GLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVL 352 (393)
T ss_pred HHHHHHHHHHHHccch--HHHHH--HHHHHH-hccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777776655443321 11111 234566 444555666666667764 67899999999999999999999998886
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 018388 168 -----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199 (357)
Q Consensus 168 -----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~ 199 (357)
+|...|.+.+...++.........||+++++.
T Consensus 353 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 353 RSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred HHHhCCchHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 35667777776666666665666777655443
No 145
>PRK03699 putative transporter; Provisional
Probab=99.42 E-value=9.3e-12 Score=111.48 Aligned_cols=167 Identities=8% Similarity=0.051 Sum_probs=125.2
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
+.++...+..++...........+|.+.++ +.+.+..+.|.+.+.+.++..++.+..|+++||++||+.+...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-------~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~ 277 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQK-------KFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVL 277 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHH
Confidence 344555555666666666666778888865 3345566778888999999999999999999999999998887
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
..+..+...+....++ .+.+.+..++.|+ ..+...+...++..|..| +++++..+.......+|..++|.+.|++
T Consensus 278 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l 352 (394)
T PRK03699 278 AGLALVLMYLFVNTDD---PSHLLYAILGLGF-FSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPI 352 (394)
T ss_pred HHHHHHHHHHHHHcCC---chHHHHHHHHHHH-HHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 7777776666666666 5555566777887 555566777777777765 4567788888888899999999998875
Q ss_pred ----hhHHHHHHHHHHHHHHHHH
Q 018388 168 ----STTSAFQAATIVSMLAAAY 186 (357)
Q Consensus 168 ----~~~~~f~~~~~~~~~~~~~ 186 (357)
|++..++..+++..+..+.
T Consensus 353 ~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 353 VAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HHHhCchhhhhhhHHHHHHHHHH
Confidence 7788888777775555443
No 146
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.41 E-value=2.2e-11 Score=108.87 Aligned_cols=172 Identities=17% Similarity=0.191 Sum_probs=117.7
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhh-H
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT-L 86 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~-~ 86 (357)
+.++...+..++............|.+.++. .+.+..+.+++.+...++..++.++.|+++||+|||+... .
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 287 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQE-------RGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVF 287 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-------hcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhH
Confidence 4455666667777777777778888888652 3444566788889999999999999999999999996211 1
Q ss_pred HHHHHHHH----HHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHh
Q 018388 87 PLTLSIIP----LAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (357)
Q Consensus 87 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (357)
......++ .............+.......+.+. +.+ ..+...+++.|..|+|+|++++++.+....+|..++|.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 365 (399)
T TIGR00893 288 ARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFF-GLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPI 365 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHh-chh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhH
Confidence 11111111 1111111111113333333344343 444 56889999999999999999999999999999999999
Q ss_pred hhHHh----h-hHHHHHHHHHHHHHHHHHHH
Q 018388 163 AARFL----S-TTSAFQAATIVSMLAAAYMR 188 (357)
Q Consensus 163 ~~~~l----~-~~~~f~~~~~~~~~~~~~~~ 188 (357)
+.+.+ + |+..|++.++..++..+..+
T Consensus 366 i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 366 VIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 98886 5 88888888777666554443
No 147
>PRK10504 putative transporter; Provisional
Probab=99.40 E-value=3.1e-11 Score=110.82 Aligned_cols=153 Identities=12% Similarity=0.150 Sum_probs=116.4
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++.+.......++...+........|.|.++ ..+.+....|+......++..++.++.|+++||+|||+++..
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~ 332 (471)
T PRK10504 260 TRTFSLGLAGSFAGRIGSGMLPFMTPVFLQI-------GLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVA 332 (471)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHH
Confidence 3455566666666666666666677888764 234445677888888888888888999999999999999998
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
+..+..+...+..+.+.....+.+.+..++.|+ +.+...+....+..+..|+|+|+.+.+..+....+|..+|+.+++.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ 411 (471)
T PRK10504 333 TTLGLALVSLLFMLVALLGWYYLLPFVLFLQGM-VNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGL 411 (471)
T ss_pred HHHHHHHHHHHHHhccccccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 888887777666654321223444455667777 5566667888899999999999999999999999999999988876
Q ss_pred h
Q 018388 167 L 167 (357)
Q Consensus 167 l 167 (357)
+
T Consensus 412 l 412 (471)
T PRK10504 412 L 412 (471)
T ss_pred H
Confidence 4
No 148
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.39 E-value=7.9e-12 Score=114.77 Aligned_cols=145 Identities=14% Similarity=0.071 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHH---ccchh-----HHHHHHHHHHHhhhccc
Q 018388 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY---RRSIS-----FFYAYYALRTLTAMVCE 122 (357)
Q Consensus 51 ~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~r~l~G~~~~ 122 (357)
...++......++..++.++.|+++||+|||+.+..+.++..++..+..+ ..... ....+....+..+..+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (481)
T TIGR00879 319 DHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAM 398 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHc
Confidence 44577788888889999999999999999999999888877777666652 11110 12222223333332122
Q ss_pred chHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 018388 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (357)
Q Consensus 123 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 196 (357)
...+....++.|..|+++|+++++.......+|..++|.+.+.+ +|++.|++.++++++..++..++.||+++
T Consensus 399 -~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 475 (481)
T TIGR00879 399 -GWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKG 475 (481)
T ss_pred -cccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCC
Confidence 23356677789999999999999999999999999999887764 68888998888877777776666776543
No 149
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.38 E-value=1.4e-11 Score=110.24 Aligned_cols=159 Identities=13% Similarity=0.046 Sum_probs=113.2
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
+.......+............+|.+.++. .+.+..+.+...+...++..++.++.|+++||+|||+.+.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 293 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQT-------LGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 44555555556666666677788888652 23444566888888899999999999999999999998775554
Q ss_pred HHHHHH--HHHHHc--cchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHH-HHHHHHHHHHhhHhhh
Q 018388 90 LSIIPL--AILAYR--RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGI-LLGVLSASFVCGTLAA 164 (357)
Q Consensus 90 ~~~~~~--~~~~~~--~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~ 164 (357)
+..+.. ...... ++ .+.+....++.|+ ..+...+...+++.|.+|+++|+++.+. .+....+|..++|.++
T Consensus 294 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~ 369 (394)
T TIGR00883 294 LAALLAVPLLMALLDSGS---FTLFFFLVLGLAL-IGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA 369 (394)
T ss_pred HHHHHHHHHHHHHhcCCc---hHHHHHHHHHHHH-HHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH
Confidence 433322 222222 33 5566677778887 5566678899999999999999999987 4566678888999888
Q ss_pred HHh----h-hHHHHHHHHHH
Q 018388 165 RFL----S-TTSAFQAATIV 179 (357)
Q Consensus 165 ~~l----~-~~~~f~~~~~~ 179 (357)
+.+ + |++.++.....
T Consensus 370 g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 370 AALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred HHHHHHcCcchhHHHHHHHH
Confidence 876 4 66666655444
No 150
>PRK09952 shikimate transporter; Provisional
Probab=99.38 E-value=9.1e-11 Score=106.51 Aligned_cols=167 Identities=14% Similarity=0.127 Sum_probs=108.1
Q ss_pred HHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHH
Q 018388 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLA 96 (357)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~ 96 (357)
.+...+.........|.+.++.. +.+......+.....+...++.+..|+++||+|||+.+..+.++..++..
T Consensus 259 ~~~~~~~~~~~~~~~~~y~~~~~-------g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~ 331 (438)
T PRK09952 259 RLCELLTMYIVTAFALNYSTQNL-------GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAF 331 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 33444455555667777776532 22222233444455666778889999999999999998887766555443
Q ss_pred HHHH---ccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHH-HHHHHHHHhhHhhhHHh-----
Q 018388 97 ILAY---RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILL-GVLSASFVCGTLAARFL----- 167 (357)
Q Consensus 97 ~~~~---~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l----- 167 (357)
.... ..+ ..+.++...++.++ +.+...+...++++|.+|.|.|+.+.++.. .+..+|..++|.+.+++
T Consensus 332 ~~~~~~~~~~--~~~~~~~~~~l~~~-~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~ 408 (438)
T PRK09952 332 PFFMALEAQS--IFWIVFFSIMLANI-AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG 408 (438)
T ss_pred HHHHHHHcCC--hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3322 122 13333445566566 545556778899999999999998888854 44557888899888875
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHhccCC
Q 018388 168 -STTSAFQAATIVSMLAAAYMRVFLKDD 194 (357)
Q Consensus 168 -~~~~~f~~~~~~~~~~~~~~~~~~~e~ 194 (357)
+|+.++...++..++..+.. +.+||+
T Consensus 409 ~~~~~~~~~~~~~~~i~~v~~-~~~~~~ 435 (438)
T PRK09952 409 GSWHSVAIYLLAGCLISAMTA-LLMKDN 435 (438)
T ss_pred CCchHHHHHHHHHHHHHHHHH-HHcccc
Confidence 36777777766656555444 445653
No 151
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.38 E-value=8.8e-11 Score=106.33 Aligned_cols=177 Identities=16% Similarity=0.212 Sum_probs=139.3
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcc--hhh
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK--AML 84 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk--~~l 84 (357)
.|+....+++.++..-+.+.+......|.++ +++.+..+...+.-+..+...+++..+|++.||+|.| +++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~-------~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l 352 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATE-------VLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTL 352 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 4566677777777777777777777778765 4555566667777788889999999999999999999 888
Q ss_pred hHHHHHHHHHHHHHHH--------ccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHH
Q 018388 85 TLPLTLSIIPLAILAY--------RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSAS 156 (357)
Q Consensus 85 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 156 (357)
+.+++.+.+..+...+ .++ -+.+.+.-++.|+ ..|..++.+.++.+|..|+++.+..+|++....-..
T Consensus 353 ~~~l~~~~~i~~~g~~G~~~~~~g~~~---~~~f~~~a~~~G~-~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~s 428 (477)
T PF11700_consen 353 LISLILWIIIPLYGLFGFWPSFFGLKS---PWEFWVLAVLIGL-FMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKAS 428 (477)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCccc---HHHHHHHHHHHHH-HhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 8888777555444444 344 6778888899999 778888999999999999999999999999999999
Q ss_pred HHhhHhhhHHh-----hhHHHHHHHHHHHHHHHHHHHHhccCCC
Q 018388 157 FVCGTLAARFL-----STTSAFQAATIVSMLAAAYMRVFLKDDV 195 (357)
Q Consensus 157 ~~~g~~~~~~l-----~~~~~f~~~~~~~~~~~~~~~~~~~e~~ 195 (357)
..+||.+-+.+ +.|+.+....++.++..++. ..+++++
T Consensus 429 s~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~~ 471 (477)
T PF11700_consen 429 SWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILL-FFVDVEK 471 (477)
T ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH-hhccchh
Confidence 99999998886 35788887777755554443 4455443
No 152
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.36 E-value=8e-11 Score=106.81 Aligned_cols=176 Identities=13% Similarity=0.023 Sum_probs=110.7
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc--Ccchhh-hH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY--GRKAML-TL 86 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~--Grk~~l-~~ 86 (357)
++.+.+..+............+|.++++ +.+.+..+.+...+...++..++.++.|+++||+ ++|+.. ..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~-------~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~ 317 (434)
T PRK11663 245 IWLLSFSYVLVYVVRAAINDWGNLYMSE-------TLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLI 317 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHH
Confidence 3444444444455555555677888754 3355556678888999999999999999999999 333332 22
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
..+...+........+... .....+..+..|++..+. .........|..|+++|++++|+.+....+|..++|.+.+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~ 395 (434)
T PRK11663 318 FAAGILLSVGSLWLMPFAS-YVMQAACFFTIGFFVFGP-QMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAK 395 (434)
T ss_pred HHHHHHHHHHHHHHccccc-HHHHHHHHHHHHHHHhhH-HHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHH
Confidence 1111111111111112111 223333344445422121 12334567899999999999999999999999999988877
Q ss_pred h----hhHHHHHHHHHHHHHHHHHHHHhccCC
Q 018388 167 L----STTSAFQAATIVSMLAAAYMRVFLKDD 194 (357)
Q Consensus 167 l----~~~~~f~~~~~~~~~~~~~~~~~~~e~ 194 (357)
+ +|+..|+..+++.++..+..++..++.
T Consensus 396 l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 427 (434)
T PRK11663 396 VLEIWHWTGFFVVISIAAGISALLLLPFLNAQ 427 (434)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5 788999988888777666555555443
No 153
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.36 E-value=9.3e-11 Score=105.33 Aligned_cols=167 Identities=9% Similarity=-0.042 Sum_probs=114.9
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhh-HH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT-LP 87 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~-~~ 87 (357)
.++...+..++...+........|.+.++ .+.+..+.+.+.+...++..++.+..|+++||+|||+.+. .+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--------~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~ 294 (402)
T TIGR00897 223 NVLLGGMVRIINTIGLFGFAVFLPMFVAE--------LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFG 294 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Confidence 34444455555555555556677877753 2344455678888889999999999999999999988764 33
Q ss_pred HHHHHHHHHHHHH-----ccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHh
Q 018388 88 LTLSIIPLAILAY-----RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (357)
Q Consensus 88 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (357)
.+...+....... .++ .+...+..++.|+ +.+...+ ....+.|.. +++|+++.|+.+....+|..++|.
T Consensus 295 ~l~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~G~-~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~ 368 (402)
T TIGR00897 295 GVGCGIFTLALYYIPQHFGHS---FAVALIIAIALGI-FLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPA 368 (402)
T ss_pred HHHHHHHHHHHHHHHHccCCc---HHHHHHHHHHHHH-HHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333322 123 5556677888887 4444434 455667754 568999999999999999999999
Q ss_pred hhHHh----hhHHHHHHHHHHHHHHHHHHHH
Q 018388 163 AARFL----STTSAFQAATIVSMLAAAYMRV 189 (357)
Q Consensus 163 ~~~~l----~~~~~f~~~~~~~~~~~~~~~~ 189 (357)
+++.+ ||+..+++.+++.++..+...+
T Consensus 369 i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 369 IAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 88875 7888888888776665555443
No 154
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.33 E-value=1e-10 Score=106.77 Aligned_cols=172 Identities=11% Similarity=-0.032 Sum_probs=107.2
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc--Ccchhhh-
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY--GRKAMLT- 85 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~--Grk~~l~- 85 (357)
.++...+..++...........+|.+.++. .+.+....++....+.++..++.++.|+++||+ |||+...
T Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~-------~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~ 326 (452)
T PRK11273 254 LLWYIAIANVFVYLLRYGILDWSPTYLKEV-------KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGV 326 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHH
Confidence 344555555555555556667889998752 233344567888888899999999999999999 4554322
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHH-hhHhhh
Q 018388 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFV-CGTLAA 164 (357)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~ 164 (357)
....+..++.......+... .+...+..++.|. ...........+..|..|+++|++++|+.+....+|.. .||.+.
T Consensus 327 ~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~ 404 (452)
T PRK11273 327 FFMTLVTIATIVYWLNPAGN-PTVDMACMIVIGF-LIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV 404 (452)
T ss_pred HHHHHHHHHHHHHHHhcccC-hHHHHHHHHHHHH-HHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhH
Confidence 22222333333322222111 3333344444454 21111123345677999999999999999888777754 478877
Q ss_pred HHh----hhHHHHHHHHHHHHHHHHHHHH
Q 018388 165 RFL----STTSAFQAATIVSMLAAAYMRV 189 (357)
Q Consensus 165 ~~l----~~~~~f~~~~~~~~~~~~~~~~ 189 (357)
+.+ ||+..|++.++.+++..+....
T Consensus 405 g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 405 GYTVDFFGWDGGFMVMIGGSILAVILLIV 433 (452)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 765 7899998887776665555443
No 155
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.33 E-value=1.7e-10 Score=102.93 Aligned_cols=161 Identities=11% Similarity=0.105 Sum_probs=121.0
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
+.++......++............|.+.+| .+.+....|...+...++..+..++.|++.||+|+|+.+..+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~ 276 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQA--------AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLS 276 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHHH--------CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 344545555555555555555666777753 244455678888888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHH-HHHHHHHHhhHhhhHH
Q 018388 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILL-GVLSASFVCGTLAARF 166 (357)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~ 166 (357)
.+...+...+...+++ .+.+++..++.|+ +.+...+....++.+. +++++++..+..+ ...++|..+||.++|.
T Consensus 277 ~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~ 351 (382)
T PRK11128 277 AICGVVRWGLMGSTTA---LPWLIVIQILHCG-TFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGF 351 (382)
T ss_pred HHHHHHHHHHHHhhhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888877777887 7788889999999 6677778888888886 5667788888876 5567888899999998
Q ss_pred h----hhHHHHHHHHHHHHH
Q 018388 167 L----STTSAFQAATIVSML 182 (357)
Q Consensus 167 l----~~~~~f~~~~~~~~~ 182 (357)
+ ++ ..++..+.+.++
T Consensus 352 l~~~~g~-~~~~~~~~~~~~ 370 (382)
T PRK11128 352 LYQHLGA-GVFWVMALVALP 370 (382)
T ss_pred HHHhccH-HHHHHHHHHHHH
Confidence 7 33 355555555443
No 156
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.32 E-value=1.7e-09 Score=99.51 Aligned_cols=166 Identities=13% Similarity=0.103 Sum_probs=112.8
Q ss_pred HHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHH-HHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHH
Q 018388 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQA-IIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPL 95 (357)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~-~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~ 95 (357)
.++...+........+.+..+ +.+.+..+.|+... ...++..++.++.|+++||+|+|+.+.++.++..+..
T Consensus 231 ~~l~~~~~~~~~~~~~~~l~~-------~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 231 IVLYKLGDAFAMSLTTTFLIR-------GVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 344444444444455556543 23555667788874 5567899999999999999999988776665545443
Q ss_pred HHH---HHc-cchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----
Q 018388 96 AIL---AYR-RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL---- 167 (357)
Q Consensus 96 ~~~---~~~-~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l---- 167 (357)
... ... ++ .+.+...-+++.+ ..+...+...++..+..+++.+++..+..+...++|..+++.++|.+
T Consensus 304 l~~~~l~~~~~~---~~~l~~~~~l~~~-~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~ 379 (491)
T PRK11010 304 AGYWLLSITDKN---LYSMGAAVFFENL-CGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH 379 (491)
T ss_pred HHHHHHHhcccc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 322 232 23 4444445555554 33444466788889999999999999999999999988777777764
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCC
Q 018388 168 STTSAFQAATIVSMLAAAYMRVFLKDD 194 (357)
Q Consensus 168 ~~~~~f~~~~~~~~~~~~~~~~~~~e~ 194 (357)
||+..|.+.++++++..++..+ ++++
T Consensus 380 G~~~~f~~~~~~~l~~l~~~~~-~~~~ 405 (491)
T PRK11010 380 GWPTFYLFSVAAAVPGLLLLLV-CRQT 405 (491)
T ss_pred ChHHHHHHHHHHHHHHHHHHHH-HHhc
Confidence 8999899888887776555544 4543
No 157
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.32 E-value=6.3e-11 Score=102.33 Aligned_cols=296 Identities=14% Similarity=0.083 Sum_probs=169.3
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh----cCcchh
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAM 83 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr----~Grk~~ 83 (357)
+.+..+....+-..+++..-....++|+++ .+++..+.+.+-....+...+.+|+.|..+|| |||||.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~--------lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP 103 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS--------LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP 103 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH--------cCCCcccccccccccccccceecccccccccccccccccccc
Confidence 455566666666777777777888888774 33333455666667788889999999999995 899988
Q ss_pred hhHHH-HHHHHHHHHHHHccchh--------------HHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhH-HHH
Q 018388 84 LTLPL-TLSIIPLAILAYRRSIS--------------FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRAS-AFG 147 (357)
Q Consensus 84 l~~~~-~~~~~~~~~~~~~~~~~--------------~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~-~~~ 147 (357)
++... +...++..+..++.+.. ....++++--+.=+ +.-..+..+.+++.|...++++.+ +++
T Consensus 104 fI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~-A~n~~qgp~ra~L~Dl~~~d~~~~~Ans 182 (498)
T KOG0637|consen 104 FILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDV-ANNTLQGPCRALLADLARGDAKKTRANS 182 (498)
T ss_pred hHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHh-hhhhhhhhHHHHHHHhccChhhhhccch
Confidence 77544 45566666777665421 12233344444444 444566789999999998777666 999
Q ss_pred HHHHHHHHHHHhhHhhhHHhhhHH--HHHHHHHHHHHHHHHH-------HHhccCCCCCCCCCCCCcccccccccccccC
Q 018388 148 ILLGVLSASFVCGTLAARFLSTTS--AFQAATIVSMLAAAYM-------RVFLKDDVPNDDDDDLTRPIITEETEGVNQN 218 (357)
Q Consensus 148 ~~~~~~~~g~~~g~~~~~~l~~~~--~f~~~~~~~~~~~~~~-------~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (357)
+...+.++|..+|..++++.+|+- +|.....+.+.+..+- .+..+++.......+|+ +
T Consensus 183 ~f~~f~avGnvLGY~~g~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~-------------~ 249 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEK-------------P 249 (498)
T ss_pred hHHHHHHhcceeeeecccccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheeccccccccccc-------------C
Confidence 999999999999999998887742 2222222211111111 11111111110000000 0
Q ss_pred CCCCCCCccccccch-hHHHHHHh-hhcccchHHHHHHHHHHHHhhhhhhHHHHHhh-hhhcccCcch------------
Q 018388 219 ESNSPVKIPVCKKIP-SIRDLICL-LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL-KAQFHFNKNQ------------ 283 (357)
Q Consensus 219 ~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~------------ 283 (357)
+..++.+........ ...+.... ...++.++.+++...+.+++...+.-+...++ ++.|+-++..
T Consensus 250 ~s~~~~~~~~~~~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~ 329 (498)
T KOG0637|consen 250 LSPKGTTARSKSSKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNA 329 (498)
T ss_pred CCCCcccccccccCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHh
Confidence 000000000000000 11121112 23367788888888888888887766666555 3344433221
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHH
Q 018388 284 ----FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (357)
Q Consensus 284 ----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~ 326 (357)
-.+-+.+..+...+.+ ....++.||+|.|+.+..+.....++
T Consensus 330 GV~~G~~GL~ins~~lgi~S-~~~~~l~~~~g~r~~y~~~~~~f~~~ 375 (498)
T KOG0637|consen 330 GVRMGCLGLMLNSIVLGIYS-LLVEKLSRKFGTRKRYWGGVNAFGLA 375 (498)
T ss_pred ccccchHHHHHHHHHHHHHH-HHHHHHHHhcCcceEEeehhHHHHHH
Confidence 1223445555555656 66688899999655544444433333
No 158
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.32 E-value=1.8e-10 Score=103.25 Aligned_cols=169 Identities=11% Similarity=0.055 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHH
Q 018388 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (357)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~ 92 (357)
.....+.............|.+.++... +.+.+....|+..++..+...++.+..|++.||+|||+.+.++.++.+
T Consensus 220 ~~l~~~~~~~~~~~~~~~~~~y~~~~~~----~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~ 295 (396)
T TIGR00882 220 FVLYVVGVACVYDVFDQQFANFFTSFFA----TPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMS 295 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc----ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 3333333333334444456777766331 112333456888888889999999999999999999999999988888
Q ss_pred HHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHH-HHHHHHHHHHhhHhhhHHh----
Q 018388 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGI-LLGVLSASFVCGTLAARFL---- 167 (357)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l---- 167 (357)
+...+...+++ .+.+++.++++|+ +.+........+..+..+++.++...+. .+....+|..++|.++|++
T Consensus 296 l~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~ 371 (396)
T TIGR00882 296 VRIIGSSFATT---ALEVVILKMLHAF-EVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI 371 (396)
T ss_pred HHHHHHHhcCC---hHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc
Confidence 88877777777 7777888999998 5455545566677777777777776655 5678899999999888875
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 018388 168 STTSAFQAATIVSMLAAAYMRV 189 (357)
Q Consensus 168 ~~~~~f~~~~~~~~~~~~~~~~ 189 (357)
||+..|.+.+++.++..+...+
T Consensus 372 G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 372 GFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred ccHHHHHHHHHHHHHHHHHHHH
Confidence 7889999988887666655443
No 159
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.31 E-value=7.9e-11 Score=105.84 Aligned_cols=131 Identities=14% Similarity=0.088 Sum_probs=99.4
Q ss_pred hhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHH-HHHHccch
Q 018388 26 MVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLA-ILAYRRSI 104 (357)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~-~~~~~~~~ 104 (357)
.....+|.+..+ +.+.+..+.+++.+...++..++.++.|+++||+|||+.+..+.+...+... .....++
T Consensus 256 ~~~~~~~~~~~~-------~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~- 327 (405)
T TIGR00891 256 PIQDLLPTYLKA-------DLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGAN- 327 (405)
T ss_pred hhhhhhHHHHHH-------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCc-
Confidence 334456777654 3345556778889999999999999999999999999998887766533322 2333344
Q ss_pred hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 105 SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 105 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
.+.+.+..++.++ ..+...+...+++.|..|+++|++++|+.+....+|..+||.++|.+
T Consensus 328 --~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l 387 (405)
T TIGR00891 328 --VAVLGLGLFFQQM-LVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALL 387 (405)
T ss_pred --hHHHHHHHHHHHH-HHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 4555566566666 33444467788999999999999999999999999999999999887
No 160
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.31 E-value=9.1e-11 Score=103.81 Aligned_cols=148 Identities=18% Similarity=0.224 Sum_probs=116.4
Q ss_pred hhHHHHHHHHHHHHHHhhH-hhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 10 LSHLFVTVFLWGFATMMVV-PAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
+.......++......... ...|.+.++. .+.+..+.|+..+...++..++.++.+++.||+|||+.+..+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 284 (365)
T TIGR00900 212 LRTLLLLALLFNLVFAPAIVALFPYVQSKY-------LGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAI 284 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-------hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHH
Confidence 4444444444444443333 6677777652 3445566789999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
.+.++......+.++ ..+.+.+..++.|+ +.+...+...+++.|..|+|+|++..+..+....+|..+||.++|.+
T Consensus 285 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 285 FVIGLAILVVGLTPP--NFPLFLVLWFAIGV-GYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred HHHHHHHHHHHhhch--hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777777776653 16677788899998 66777788999999999999999999999999999999999998876
No 161
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.30 E-value=6.7e-11 Score=108.85 Aligned_cols=142 Identities=13% Similarity=0.076 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHcc--chhHHHHHHHHHHHhhhcccchHHHHHHH
Q 018388 54 GFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR--SISFFYAYYALRTLTAMVCEGSINCLALA 131 (357)
Q Consensus 54 g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 131 (357)
++......+...++.++.|+++||+|||+.++.+.++..++.+++.... +.... ....+.++.+.+......|....
T Consensus 309 ~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 387 (479)
T PRK10077 309 LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGI-VALLSMLFYVAAFAMSWGPVCWV 387 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccH-HHHHHHHHHHHHHhccccchhHH
Confidence 4455566778889999999999999999999999998888877765432 21111 22223333333121223366789
Q ss_pred HHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhH----------HhhhHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 018388 132 YVADNISERQRASAFGILLGVLSASFVCGTLAAR----------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (357)
Q Consensus 132 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~----------~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 196 (357)
++.|.+|+++|++++++......+|..+++.+.. ..+|++.|++.++++++..++.+++.||+++
T Consensus 388 ~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 388 LLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKG 462 (479)
T ss_pred HhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCC
Confidence 9999999999999999999999888888754433 2367788888887777776666666777654
No 162
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.30 E-value=4.6e-10 Score=97.26 Aligned_cols=172 Identities=12% Similarity=0.070 Sum_probs=130.4
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++.++......++...+.....+++.++++| ..+.+....+++...+.++..+++...|+++|| +.|+.+..
T Consensus 210 ~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~-------v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~ 281 (394)
T COG2814 210 RPGVLLGLLATFLFMTGHFALYTYIRPFLES-------VAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIA 281 (394)
T ss_pred CchHHHHHHHHHHHHcchhhhHHhHHHHHHH-------ccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHH
Confidence 4567777888888888888888888888876 335556678999999999999999999999999 99999998
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
...+..+......+..+. .+..++.-++.|+ ............+++ ..+|++..+.+++...+++|..+|..+||.
T Consensus 282 ~~~l~a~~~l~l~~~~~~--~~~~~~~~~~wg~-a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~ 357 (394)
T COG2814 282 ALLLLALALLALTFTGAS--PALALALLFLWGF-AFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGL 357 (394)
T ss_pred HHHHHHHHHHHHHHhcch--HHHHHHHHHHHHH-HhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877777777766665542 4455556666676 323322333344444 336899999999999999999999999988
Q ss_pred h----hhHHHHHHHHHHHHHHHHHHHHh
Q 018388 167 L----STTSAFQAATIVSMLAAAYMRVF 190 (357)
Q Consensus 167 l----~~~~~f~~~~~~~~~~~~~~~~~ 190 (357)
. |+....+..+++.++..++....
T Consensus 358 v~~~~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 358 VLDALGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred HHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 5 77888888888877766665543
No 163
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.30 E-value=3.7e-10 Score=101.68 Aligned_cols=175 Identities=14% Similarity=0.048 Sum_probs=113.4
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
++...+..++............|.+.++. .+.+..+.|+......++..++.+..|+++||+|+|+.+..+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-------~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~ 289 (406)
T PRK15402 217 FVAGALALGLVSLPLLAWIALSPVILISG-------EQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLW 289 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 34444444333333333344556666542 33445566777777778888999999999999999999988888
Q ss_pred HHHHHHHHHHHcc--chhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 90 LSIIPLAILAYRR--SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 90 ~~~~~~~~~~~~~--~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
...++..+....+ +....+++++..++.|+ +.+...+.......+ .++++|++..+..+....+|..+|+.+++.+
T Consensus 290 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~-g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l 367 (406)
T PRK15402 290 PMVAGLLLAALATVISSHAYLWLTAGLSLYAF-GIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHA 367 (406)
T ss_pred HHHHHHHHHHHHHHcccccHHHHHHHHHHHHH-HHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7777766665532 11115556777888888 556555555555443 3458999999999999999999999999886
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhccC
Q 018388 168 ----STTSAFQAATIVSMLAAAYMRVFLKD 193 (357)
Q Consensus 168 ----~~~~~f~~~~~~~~~~~~~~~~~~~e 193 (357)
++....+..++..++...+...+.++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK15402 368 YLGGGNGLFNLFNLANGLLWLLLVRIFLKD 397 (406)
T ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44443444433433333333344443
No 164
>PRK10054 putative transporter; Provisional
Probab=99.28 E-value=2e-10 Score=102.84 Aligned_cols=176 Identities=13% Similarity=0.064 Sum_probs=122.6
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
|.++......++..+.........+.+..+. .+.+.+....|+..+...+......++.|++.||+++|+.+..+
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~ 280 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVV-----ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAG 280 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHh-----cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHH
Confidence 3444444555555555544444556665432 13345555668888888888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHc-cchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 88 LTLSIIPLAILAYR-RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 88 ~~~~~~~~~~~~~~-~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
..+..++.....+. ++ .+.+.+..++.|+ +.+...|...+++.+..|++.|++..+..+ ...+|..+||.++|.
T Consensus 281 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~ 355 (395)
T PRK10054 281 TLCFVIGLVGFIFSGNS---LLLWGMSAAVFTV-GEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGV 355 (395)
T ss_pred HHHHHHHHHHHHHcchH---HHHHHHHHHHHHH-HHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHH
Confidence 88888887777664 44 5556677888888 666666788889999999999999988655 455789999998888
Q ss_pred h----hhHHHHHHHHHHHHHHHHHHHHhccC
Q 018388 167 L----STTSAFQAATIVSMLAAAYMRVFLKD 193 (357)
Q Consensus 167 l----~~~~~f~~~~~~~~~~~~~~~~~~~e 193 (357)
+ +.+..|++.+....+..++.....+|
T Consensus 356 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (395)
T PRK10054 356 ILTTLPPWSLFVILALAIVAAWLLMLKGMRA 386 (395)
T ss_pred HHHHcChhhHHHHHHHHHHHHHHHHHhcccc
Confidence 6 45566666655544444444333333
No 165
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.27 E-value=2.5e-10 Score=103.74 Aligned_cols=178 Identities=10% Similarity=-0.023 Sum_probs=110.8
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
++...+..++...........+|.+.++ ..+.+....++......++..++.+..|+++||+++|+....+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~-------~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~ 325 (438)
T TIGR00712 253 LWYIAIANVFVYLLRYGVLDWSPTYLKE-------VKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVF 325 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHH-------ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHH
Confidence 3344444444444444555677888875 234445566888888899999999999999999976443333332
Q ss_pred HHH---HHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHH-HHhhHhhhH
Q 018388 90 LSI---IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSAS-FVCGTLAAR 165 (357)
Q Consensus 90 ~~~---~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~~g~~~~~ 165 (357)
... ++.......+... .+......+..|++..+.. ........|.+|+++|+++.|+.+....+| ..+||.+.|
T Consensus 326 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G 403 (438)
T TIGR00712 326 FMTLVTIAVIVYWMNPAGN-PLVDMICMIVIGFLIYGPV-MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG 403 (438)
T ss_pred HHHHHHHHHHHHHhcCCCc-hHHHHHHHHHHHHHHccHH-HHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHH
Confidence 221 1222222222111 2323333444454111222 222345779999999999999998877766 567888877
Q ss_pred Hh----hhHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 018388 166 FL----STTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (357)
Q Consensus 166 ~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 196 (357)
.+ ||...+++.....++..+...+..||+++
T Consensus 404 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 404 YTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 65 67888888877777777777777887653
No 166
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.25 E-value=6.1e-10 Score=95.79 Aligned_cols=176 Identities=13% Similarity=0.172 Sum_probs=135.2
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++++....++.++..=+.+-....-..+.. .+++++..+...+.....+..+++++++|++.||+|.|+++..
T Consensus 251 ~~~i~~FLiA~~~~~DGv~til~~~~~fg~-------~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~ 323 (438)
T COG2270 251 RKNLVLFLIARFFYIDGVNTILAMGGVFGA-------ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMI 323 (438)
T ss_pred ccchHHHHHHHHHHHhhHHHHHHHHHHHHH-------HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehH
Confidence 445666666666655555555555555543 3677888888888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
+.++..+.++...+... -..+.++-.+.|. ..|..++.+.++.++.+|+++-++.+|+++...-.+..+||.+-+.
T Consensus 324 ~lvi~~~~~~~~~~~~~---~~~f~i~gll~g~-s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v 399 (438)
T COG2270 324 GLVILSIAALYLIFLEG---ELDFWILGLLVGT-SLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAV 399 (438)
T ss_pred HHHHHHHHHHHHHHccc---cHHHHHHHHHHHH-hcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHH
Confidence 99999888887777666 4455677778888 7788889999999999999999999999999999999999998887
Q ss_pred h-----hhHHHHHHHHHHHHHHHHHHHHhccCC
Q 018388 167 L-----STTSAFQAATIVSMLAAAYMRVFLKDD 194 (357)
Q Consensus 167 l-----~~~~~f~~~~~~~~~~~~~~~~~~~e~ 194 (357)
+ +-|..+....++..+. +......|++
T Consensus 400 ~t~iTg~~r~g~~~i~vll~iG-l~~L~~v~~~ 431 (438)
T COG2270 400 ITQITGSSRAGVLSIIVLLLIG-LLLLLRVKVP 431 (438)
T ss_pred HHHHhcchhhHHHHHHHHHHhh-HhhEEeecCC
Confidence 6 3466666555543333 2333445554
No 167
>TIGR00895 2A0115 benzoate transport.
Probab=99.25 E-value=2.9e-10 Score=101.88 Aligned_cols=142 Identities=15% Similarity=0.181 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHH
Q 018388 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (357)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~ 93 (357)
+...++...........+|.+.++ .+.+..+.++..+...++..++.++.|+++||+|||+......+....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 327 (398)
T TIGR00895 256 WLLYFMLLVGVYFLTNWLPKLMVE--------LGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Confidence 334444444444555556644432 234445668888999999999999999999999999554444443333
Q ss_pred HHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
...+....++ .+...+..++.|+ +.+...+...+++.|.+|+++|++++++......+|..+||.++|++
T Consensus 328 ~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 328 AVLVGSTLFS---PTLLLLLGAIAGF-FVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHhhC---HHHHHHHHHHHHH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 3333332445 5566777888888 66667788999999999999999999999999999999999998864
No 168
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.25 E-value=6.9e-10 Score=99.34 Aligned_cols=164 Identities=10% Similarity=0.014 Sum_probs=112.3
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL-GTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~-~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
++......++...+........+.+.+| .+.+..+.|++...... ...++.++.|++.||+|+|+.+..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~--------~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~ 281 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD--------AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGV 281 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh--------cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3444455555555555566667777754 35566677888877764 56677899999999999999988877
Q ss_pred HHHHHHHHHHHH------ccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCc-cchhHHHHHHHHHHHHHHHhhH
Q 018388 89 TLSIIPLAILAY------RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-RQRASAFGILLGVLSASFVCGT 161 (357)
Q Consensus 89 ~~~~~~~~~~~~------~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~ 161 (357)
+...+....... .++ .........+.++ ..+...+...+...+..++ +++++.++..+...++|..+||
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~ 357 (390)
T TIGR02718 282 GLAGSLALLWFAQAAFWLAPG---IAVAWSCSAFGSL-ITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIAS 357 (390)
T ss_pred HHHHHHHHHHHHHHHcccCCc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHH
Confidence 665333222221 122 2333444455555 4455556777777777765 8899999999999999999999
Q ss_pred hhhHHh----hhHHHHHHHHHHHHHHHH
Q 018388 162 LAARFL----STTSAFQAATIVSMLAAA 185 (357)
Q Consensus 162 ~~~~~l----~~~~~f~~~~~~~~~~~~ 185 (357)
.++|.+ |++..|+..+++.++..+
T Consensus 358 ~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 358 SIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 999875 677888887766555433
No 169
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.23 E-value=4.6e-10 Score=114.28 Aligned_cols=159 Identities=13% Similarity=0.054 Sum_probs=121.7
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHH-HHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIY-LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
++...+..++...........+|.+..+. .+.+.. ..|++.+...++.++++++.|+++||+++|+.+.++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~ 306 (1146)
T PRK08633 234 LWLAIIGLSYFWFISQLAQANFPAYAKEV-------LGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGA 306 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHH-------hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHH
Confidence 34444444444445555566778787653 233344 6789999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-
Q 018388 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (357)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l- 167 (357)
++.+++.++..+..+ .+.+++..++.|+ +.+...+...+++.+..|+++|+++++..+....+|..+++.+++.+
T Consensus 307 ~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 307 LGLALSLFLLPTAPS---LASVLVLFFLFGF-SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred HHHHHHHHHHHHhhh---HHHHHHHHHHHHH-HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888777777 7777788888898 66777678899999999999999999999999999988888777665
Q ss_pred ----hhHHHHHHHHHH
Q 018388 168 ----STTSAFQAATIV 179 (357)
Q Consensus 168 ----~~~~~f~~~~~~ 179 (357)
++...+++.+.+
T Consensus 383 ~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 383 GLGLSPAGLFYLIALV 398 (1146)
T ss_pred HhccCHHHHHHHHHHH
Confidence 234455554444
No 170
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.23 E-value=1.8e-09 Score=95.94 Aligned_cols=179 Identities=15% Similarity=0.182 Sum_probs=133.6
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
+++....+..++.......+....+.|+++.- +.+....|.+.++..++-...-...+++..|+|.|+++.++
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~g-------g~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a 279 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQELG-------GYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLA 279 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 44566677777888888888888898887631 12233456666777777778888899999999999999999
Q ss_pred HHHHHHHHHHHHHc-cchhH-HHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHH-HHHHHHHhhHhhh
Q 018388 88 LTLSIIPLAILAYR-RSISF-FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLG-VLSASFVCGTLAA 164 (357)
Q Consensus 88 ~~~~~~~~~~~~~~-~~~~~-~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~ 164 (357)
.+..++=..+.+.. ++... .........++|+ .-+..+.....++.+..|+|.|+++.++++. ..++|..+|..++
T Consensus 280 ~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~-tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ig 358 (400)
T PF03825_consen 280 LVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGL-TFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIG 358 (400)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHH
Confidence 99999888888887 44111 1223344567998 7788889999999999999999999999876 4689999999999
Q ss_pred HHh----------hhHHHHHHHHHHHHHHHHHHHHhccCC
Q 018388 165 RFL----------STTSAFQAATIVSMLAAAYMRVFLKDD 194 (357)
Q Consensus 165 ~~l----------~~~~~f~~~~~~~~~~~~~~~~~~~e~ 194 (357)
|++ .|...+.+.+.+.++..++.+++.||+
T Consensus 359 G~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 359 GWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 986 234455566666555555555556654
No 171
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.22 E-value=1.6e-09 Score=96.76 Aligned_cols=139 Identities=12% Similarity=0.094 Sum_probs=93.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHH-ccchhHHHHHHHHHHHhhhcccch
Q 018388 46 CSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY-RRSISFFYAYYALRTLTAMVCEGS 124 (357)
Q Consensus 46 ~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~l~G~~~~~~ 124 (357)
.+.+....++..+...++..++.++.|++.||+|+|+.+..+..+..++.++... .++ .+...+..++.+.+..+.
T Consensus 230 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~ 306 (382)
T PRK10091 230 SGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGM---KTASLIFAFICCAGLFAL 306 (382)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHhh
Confidence 3455567799999999999999999999999999999999888877777655543 344 333444444555422222
Q ss_pred HHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-----hhHHHHHHHHHHHHHHHHHHHH
Q 018388 125 INCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAATIVSMLAAAYMRV 189 (357)
Q Consensus 125 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-----~~~~~f~~~~~~~~~~~~~~~~ 189 (357)
..+.......+..++|.++... .+....+|..+||.++|.+ +|++.+...+.+..+.......
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 307 SAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred hHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHH
Confidence 2222333444444555555543 3567789999999998875 5788888877665555444333
No 172
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.22 E-value=2.1e-08 Score=89.05 Aligned_cols=303 Identities=13% Similarity=0.096 Sum_probs=166.5
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
|..+.++...++...+..+.....|.++.+.. |+ .. ...+...-...+..+++++..|.+.||..|+++...+
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~-p~--sL----l~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~ 74 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIF-PG--SL----LPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTS 74 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CC--Cc----HHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHH
Confidence 45577888999999999999999999988742 11 11 1223334455677788999999999999999987776
Q ss_pred HHHHHHHHHH----HH--Hcc-c-----hhHHHHHHHHHHHhhhcccchHHHHHHHH--HhhCC------CccchhHHHH
Q 018388 88 LTLSIIPLAI----LA--YRR-S-----ISFFYAYYALRTLTAMVCEGSINCLALAY--VADNI------SERQRASAFG 147 (357)
Q Consensus 88 ~~~~~~~~~~----~~--~~~-~-----~~~~~~~~~~r~l~G~~~~~~~~~~~~~~--i~~~~------~~~~r~~~~~ 147 (357)
.+..-++... .. +.. + ......+++.-.+.|. . .-........ =-||+ +++++.+.++
T Consensus 75 l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~-i-~~Las~~~~iavERDWVvvi~~~~~~~La~~NA 152 (432)
T PF06963_consen 75 LVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGA-I-ERLASIANTIAVERDWVVVIAGGDPGALARMNA 152 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHH-H-HHHHHhhhhheeccchhhhhcCCChhhHHHHHH
Confidence 6544333222 11 111 1 1112222222222222 0 1111111111 12332 2344566666
Q ss_pred HHHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhcc----CCCCCCCCCCCCcccccccccccccCC
Q 018388 148 ILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLK----DDVPNDDDDDLTRPIITEETEGVNQNE 219 (357)
Q Consensus 148 ~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~----e~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (357)
.+.-.--+.-+++|++.|.+ +.+....+.+...++..+.=++++. +.|+-..++.+.++. ..+.+++.
T Consensus 153 ~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~----~~~~~~~~ 228 (432)
T PF06963_consen 153 TMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESE----SSSDEESS 228 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccc----cccccccc
Confidence 66666677788999888876 4455555555555554443332221 122111111000000 00000000
Q ss_pred CCCCCC-ccccccchhH---HHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHH
Q 018388 220 SNSPVK-IPVCKKIPSI---RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAG 295 (357)
Q Consensus 220 ~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 295 (357)
.++... ....+..+.. ++.++...+++.+...+...++ .+..-++...+..|+... |+++..+|.+-....+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalL-Y~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~G 306 (432)
T PF06963_consen 229 SESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALL-YFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFG 306 (432)
T ss_pred ccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHH
Confidence 000000 0000111111 1223444545555444444444 445556688888899998 999999999999999999
Q ss_pred HHHHHHHHhhhhhccchhHHHHHHHHHHHHH
Q 018388 296 TISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (357)
Q Consensus 296 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~ 326 (357)
+.+. ++.+++.+|+|..+.-..+.......
T Consensus 307 l~gT-~~~p~l~~riGlvr~G~~~l~~q~~~ 336 (432)
T PF06963_consen 307 LLGT-WVYPWLMKRIGLVRAGLWSLWWQWVC 336 (432)
T ss_pred HHHH-HHHHHHHHHhcchhhHHHHHHHHHHH
Confidence 9988 89999999999887766666655444
No 173
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.21 E-value=3e-10 Score=104.16 Aligned_cols=149 Identities=18% Similarity=0.065 Sum_probs=95.4
Q ss_pred hHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcch-------hhhHHHHHHHHHHHHHH
Q 018388 27 VVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA-------MLTLPLTLSIIPLAILA 99 (357)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~-------~l~~~~~~~~~~~~~~~ 99 (357)
....+|.+..+ +.+.+....+...++..++..++.++.|+++||+|||+ .......+.++...+..
T Consensus 271 ~~~~~p~~l~~-------~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~ 343 (476)
T PLN00028 271 MDNIIAEYFYD-------RFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLG 343 (476)
T ss_pred HHhHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 34456777654 34555667789999999999999999999999998762 22233333333333344
Q ss_pred HccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH---hhhHHHHHHH
Q 018388 100 YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF---LSTTSAFQAA 176 (357)
Q Consensus 100 ~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~---l~~~~~f~~~ 176 (357)
..++ .+...+.-++.++ ..+...+...+++.+.. +++|+...|+......+|..++|.+.+. .+|+..|++.
T Consensus 344 ~~~~---~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~ 418 (476)
T PLN00028 344 RANS---LGAAIVVMILFSI-FVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLM 418 (476)
T ss_pred ccch---HHHHHHHHHHHHH-HHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHH
Confidence 4444 3333444444454 22223334555556654 4789999999988888888888776542 2588899888
Q ss_pred HHHHHHHHHHH
Q 018388 177 TIVSMLAAAYM 187 (357)
Q Consensus 177 ~~~~~~~~~~~ 187 (357)
+++.++..++.
T Consensus 419 ~~~~~i~~~~~ 429 (476)
T PLN00028 419 GVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHHHH
Confidence 87766655444
No 174
>TIGR00898 2A0119 cation transport protein.
Probab=99.21 E-value=8e-10 Score=102.43 Aligned_cols=136 Identities=18% Similarity=0.141 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCC
Q 018388 58 AIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNI 137 (357)
Q Consensus 58 ~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~ 137 (357)
....+....+.+..+++.||+|||+.+..+.++.+++.++..+.++.. .+...+..++.++ +.+...+....+..|.+
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~ 439 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDL-YFLRTALAVLGKF-GITSAFQMVYLYTAELY 439 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCc-hHHHHHHHHHHHH-HHHHHHHHHHHHhcccc
Confidence 344566677888999999999999999999998888888877776521 1333344445454 44455577888999999
Q ss_pred CccchhHHHHHHHHHHHHHHHhhHhhhHHh--hhHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 018388 138 SERQRASAFGILLGVLSASFVCGTLAARFL--STTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (357)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l--~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 196 (357)
|++.|++++|+.+....+|.+++|.+.+.. ++..++.+.+...++..+. .+++||++.
T Consensus 440 p~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lpet~~ 499 (505)
T TIGR00898 440 PTVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGIL-TLFLPETKG 499 (505)
T ss_pred cHHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHH-HHcCcCCCC
Confidence 999999999999999999999999988832 4466777776665555444 456787654
No 175
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.21 E-value=5.6e-10 Score=102.98 Aligned_cols=150 Identities=13% Similarity=0.033 Sum_probs=113.9
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
+....+..+............+|.+.++ ..+.+..+.|+......++..++.++.|++.||+|+|+.+..+.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~lq~-------v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~ 333 (495)
T PRK14995 261 ILSGVVMAMTAMITLVGFELLMAQELQF-------VHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMA 333 (495)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 3333444444444444445567777764 335566778999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
+..++..+..........+......++.|+ +.+...+.....+.+..|+|+++.+.+..+....+|..+|+.+.+.+
T Consensus 334 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~-g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i 410 (495)
T PRK14995 334 LSALSFYGLAMTDFSTQQWQAWGLMALLGF-SAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLL 410 (495)
T ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHHHHH-hHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887776665543211114555667888898 66777777888888999999999999999999999999999887765
No 176
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.21 E-value=1.3e-09 Score=98.74 Aligned_cols=132 Identities=14% Similarity=0.107 Sum_probs=92.6
Q ss_pred hHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhH
Q 018388 27 VVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISF 106 (357)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~ 106 (357)
....+|.+.++. +.+....+...+...++..++.++.|+++||+|||+.+..+.++..+........++..
T Consensus 250 ~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 320 (426)
T PRK12307 250 IFGLLPTYLAGE--------GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDN- 320 (426)
T ss_pred HHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcccc-
Confidence 345667776541 33445668888888999999999999999999999999888877666655444333211
Q ss_pred HHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHhh
Q 018388 107 FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLS 168 (357)
Q Consensus 107 ~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 168 (357)
...+....+..+. ......+....++.|.+|+++|++++|+......+|..+||.+.+++.
T Consensus 321 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~ 381 (426)
T PRK12307 321 YLLLGACLFGLMA-TNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLG 381 (426)
T ss_pred HHHHHHHHHHHHH-hcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHH
Confidence 2212122222222 112223456678899999999999999999999999999999998873
No 177
>PRK15075 citrate-proton symporter; Provisional
Probab=99.21 E-value=1.5e-09 Score=98.59 Aligned_cols=139 Identities=17% Similarity=0.188 Sum_probs=89.4
Q ss_pred HHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHH-HH
Q 018388 20 WGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLA-IL 98 (357)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~-~~ 98 (357)
............|.|.++. .+.+..+.++......++..++.++.|+++||+|||+.+..+.....+... ..
T Consensus 250 ~~~~~~~~~~~~p~~l~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTV-------LHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 3444455566688887652 233445567888888899999999999999999999988776544332221 11
Q ss_pred H-HccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHH-HHHHHHHhhHhhhHHh
Q 018388 99 A-YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLG-VLSASFVCGTLAARFL 167 (357)
Q Consensus 99 ~-~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l 167 (357)
. ..++.. ........++.++ +.+...+....++.|..|+++|+++.++... ...++..++|.+.+.+
T Consensus 323 ~~~~~~~~-~~~~~~~~~~~~~-~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i 391 (434)
T PRK15075 323 SWLVAAPS-FARMLAVELWLSF-LYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWL 391 (434)
T ss_pred HHHHcCCc-hHHHHHHHHHHHH-HHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHH
Confidence 1 112111 3333333444455 3344545666889999999999999998544 3444466788777764
No 178
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.20 E-value=2.9e-09 Score=96.60 Aligned_cols=157 Identities=16% Similarity=0.124 Sum_probs=93.9
Q ss_pred HHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHH-
Q 018388 21 GFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA- 99 (357)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~- 99 (357)
..........+|.++++. .+.+..+.+...++..+...++.++.|+++||+|||+.+..+.++..+......
T Consensus 256 ~~~~~~~~~~lp~~l~~~-------~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~ 328 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNT-------AGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILS 328 (432)
T ss_pred HHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 444445566778887652 233445567777777788888899999999999999988776554433322111
Q ss_pred -H--ccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHH-HHHhhHhhhHHh---h-hHH
Q 018388 100 -Y--RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSA-SFVCGTLAARFL---S-TTS 171 (357)
Q Consensus 100 -~--~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l---~-~~~ 171 (357)
. .++ ....+..-.+.+. ..+...+....+.+|.+|+|.|+++.|+......+ .....|.+.+.+ + |..
T Consensus 329 ~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~ 404 (432)
T PRK10406 329 ALQNVSS---PYAAFGLVMCALL-IVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETA 404 (432)
T ss_pred HHHcCCc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcH
Confidence 1 122 2221211122222 22333345667889999999999999998765443 233466666655 3 444
Q ss_pred HHHHHHHHHHHHHHHHH
Q 018388 172 AFQAATIVSMLAAAYMR 188 (357)
Q Consensus 172 ~f~~~~~~~~~~~~~~~ 188 (357)
.++..++..++..+..+
T Consensus 405 ~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 405 FFWYVTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55555555444444433
No 179
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.19 E-value=6.4e-10 Score=102.55 Aligned_cols=151 Identities=13% Similarity=0.099 Sum_probs=115.5
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
.+....+..++..+........+|.+.++. .+.+..+.|+......++..++.++.|++.||+|||+.+..+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~ 328 (485)
T TIGR00711 256 NFTIGCVYMSLLGLGLYGSFYLLPLYLQQV-------LGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGL 328 (485)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHH
Confidence 344445555555565555566778888752 3455667799999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHc-cchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 89 TLSIIPLAILAYR-RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 89 ~~~~~~~~~~~~~-~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
.+..++..+..+. +.....+.+....++.|+ +.+...+.......+..|+|+|+++.+..+....+|..+|+.+.+.+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~-g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~ 407 (485)
T TIGR00711 329 ILYAVGFYWRAFTFTPDTPFLAIALPQFIRGF-GMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTI 407 (485)
T ss_pred HHHHHHHHHHhccCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887776632 111114556667788888 66666666777777888999999999999999999999999888765
No 180
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.19 E-value=6.4e-10 Score=101.13 Aligned_cols=149 Identities=15% Similarity=0.166 Sum_probs=108.1
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
|.+.......++...+........+.+.++.. + +....++..++..++..++.+++++++||+|||+.+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~ 293 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVL-------G-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGG 293 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeec-------C-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 44455555555555555554444444443211 1 123456777778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCC-------ccchhHHHHHHHHHHHHHHHhh
Q 018388 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-------ERQRASAFGILLGVLSASFVCG 160 (357)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g 160 (357)
.++..++.+...+.++ ..+.+.+..++.|+ +.+...+...++++|..+ ++++|...++.+....+|..+|
T Consensus 294 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg 370 (437)
T TIGR00792 294 ILLMVLGYLIFFFAGS--NLPLILVLIILAGF-GQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALA 370 (437)
T ss_pred HHHHHHHHHHHHHcch--hHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHH
Confidence 8888888777666542 15556677778887 666667888899988865 4567899999999999999999
Q ss_pred HhhhHHh
Q 018388 161 TLAARFL 167 (357)
Q Consensus 161 ~~~~~~l 167 (357)
+.+.+.+
T Consensus 371 ~~i~g~l 377 (437)
T TIGR00792 371 GFLVGLI 377 (437)
T ss_pred HHHHHHH
Confidence 9888764
No 181
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.18 E-value=1e-09 Score=111.49 Aligned_cols=161 Identities=14% Similarity=0.015 Sum_probs=121.1
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
+.++...+..++..+........+|.|.++. ++.+....|++.+.+.++..+++++.|+++||.++++.+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-------~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~ 297 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKET-------LGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIG 297 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-------cCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHH
Confidence 3455555555555555556666788888763 344556789999999999999999999999998888777766
Q ss_pred HHHHHHHHHHHHHc--------------------cchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHH
Q 018388 88 LTLSIIPLAILAYR--------------------RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFG 147 (357)
Q Consensus 88 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 147 (357)
.++.++..+...+. ++ .+.+++..++.|+ +.+...+...+++.+.+|+++||+++|
T Consensus 298 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~G~v~g 373 (1140)
T PRK06814 298 ALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRH---GWRILIDLFGLAA-AGGLYIVPLFAALQAWANPAHRARVIA 373 (1140)
T ss_pred HHHHHHHHHHHHhcccccccccccccchhhhhcccc---cHHHHHHHHHHHH-HHHHhHHHHHHHHHhhCCcccceeeeH
Confidence 66655555444442 44 5667788888898 667777889999999999999999999
Q ss_pred HHHHHHHHHHHhhHhhhHHh-----hhHHHHHHHHHH
Q 018388 148 ILLGVLSASFVCGTLAARFL-----STTSAFQAATIV 179 (357)
Q Consensus 148 ~~~~~~~~g~~~g~~~~~~l-----~~~~~f~~~~~~ 179 (357)
..+....+|..+|+.+++.+ +....+++.+.+
T Consensus 374 ~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 374 ANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999999999999888776 334555544443
No 182
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.17 E-value=4e-09 Score=95.06 Aligned_cols=264 Identities=17% Similarity=0.167 Sum_probs=154.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-----CcchhhhHHHHHHHHHHHHHHHccc-hhHHHHHHHHHHHhh
Q 018388 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKAMLTLPLTLSIIPLAILAYRRS-ISFFYAYYALRTLTA 118 (357)
Q Consensus 45 ~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-----Grk~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~l~G 118 (357)
++++++.+.....+...+.. ...|++|.++|.+ .||+-++++.++..++...++..++ ........+.-++..
T Consensus 19 ~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~ 97 (433)
T PF03092_consen 19 DLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLAS 97 (433)
T ss_pred HcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHH
Confidence 44555666666666666664 5688999999976 3455566677777666665555433 111344445555666
Q ss_pred hcccchHHHHHHHHHhhCCC--ccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhcc
Q 018388 119 MVCEGSINCLALAYVADNIS--ERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLK 192 (357)
Q Consensus 119 ~~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (357)
+ +.......+.+++.|... +++|+...+.......+|.+++..++|.+ +++..|.+.+++..+..+...+..+
T Consensus 98 ~-g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 98 F-GYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred H-HHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 6 667777889999998875 34477888888888899999998888876 6688888888777766666566556
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHH-HHHHHHHhhhhhhHHHHH
Q 018388 193 DDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAV-VAFFSGLSEGGMQASFLY 271 (357)
Q Consensus 193 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 271 (357)
| ++.+++. +. ... .++.........++..++.++.+. ++.++...+ ..++............-.
T Consensus 177 e-~~~~~~~-~~-----------~~~-~~~~~~~~~~~~~~~~~~l~~~~~-~~~i~~~~~~~~~~~~~~~~~~~a~~fy 241 (433)
T PF03092_consen 177 E-RKVRPAD-EV-----------FSF-GKEEVPCLFGSFREQLSELWRALQ-QRAIWQPILFFIFFFNLPPSISSASSFY 241 (433)
T ss_pred h-ccccccc-hh-----------hcc-cccccchhhHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHhccCCCCccEEE
Confidence 5 2222111 00 000 000000000001223344444443 566665555 333332222221111112
Q ss_pred hhhhhcc---cCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHH
Q 018388 272 FLKAQFH---FNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (357)
Q Consensus 272 ~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~ 326 (357)
+..+..+ +++...+.+..+..++.+++. .+..+...+.+-|+++....++..+.
T Consensus 242 ~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~-~~y~~~~~~~~~R~~~~~t~~~~~~~ 298 (433)
T PF03092_consen 242 FQTDALGGPHFSPSFYGTLSIVGSIASLLGI-LLYRKYFSNWSWRRIFVVTTLVSVLA 298 (433)
T ss_pred EEeccccccccCHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 3334455 788888888866666666766 55556666667788777766665544
No 183
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.15 E-value=1e-08 Score=90.00 Aligned_cols=182 Identities=12% Similarity=0.067 Sum_probs=138.4
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
|+++.+.+........+...-.-.|.|..+.. ++.+.+....|++.++..+.-.+.-.+..++.+|+|.|+.++++
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f----~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Llla 295 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFF----QSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLA 295 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHH
Confidence 44554444333333344444444666766532 24455666789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHH-HHHHHHHHHhhHhhhHH
Q 018388 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGIL-LGVLSASFVCGTLAARF 166 (357)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~ 166 (357)
..+..+=..+++++++ .+.+.+.+.+.|+ .-+........|+++.+|+|..++...+. +.+.++|..+.+.++|.
T Consensus 296 g~i~~iRi~~~~~~~~---~~~i~~~klLH~~-e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ 371 (412)
T PF01306_consen 296 GVIMAIRIIGSGFATN---PWVISLIKLLHAL-EFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGY 371 (412)
T ss_dssp HHHHHHHHHHHHT--S---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcc---hHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHh
Confidence 9999999999999999 8899999999999 66777788999999999988877777664 67788888888888887
Q ss_pred h----hhHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 018388 167 L----STTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (357)
Q Consensus 167 l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~ 197 (357)
+ |.+..|++.+.+.+...++..+.++++++.
T Consensus 372 lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 372 LYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred hHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 5 778899999988787778888877765543
No 184
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.15 E-value=6.2e-09 Score=93.15 Aligned_cols=140 Identities=11% Similarity=0.035 Sum_probs=102.1
Q ss_pred HhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHH
Q 018388 28 VPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFF 107 (357)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~ 107 (357)
...+|.+.++. ++.+..+.|++.+...++..++++..+++.||.++|+.+..+.. .++...+..+.++ .
T Consensus 225 ~~~~~~~~~~~-------lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~---~ 293 (393)
T PRK11195 225 RFLVLAWAPVA-------LGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHS---L 293 (393)
T ss_pred HHHHHHHHHHH-------cCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhH---H
Confidence 34455566542 34455678999999999999999999999999999988877753 3344444455555 5
Q ss_pred HHHHHHHHHhhhcccchHHHHHHHHHhhCCCccc-hhHHHHHHHHHHHHHHHhhHhhhHHh---h--hHHHHHHHHHH
Q 018388 108 YAYYALRTLTAMVCEGSINCLALAYVADNISERQ-RASAFGILLGVLSASFVCGTLAARFL---S--TTSAFQAATIV 179 (357)
Q Consensus 108 ~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l---~--~~~~f~~~~~~ 179 (357)
+...+..++.|+ +.+...+...+.+.+..|+|. ++++.+..+....+|..++..+.+.+ + ++..+...+.+
T Consensus 294 ~~~~~~~~~~G~-~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (393)
T PRK11195 294 LPAYPLLILIGA-LGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLL 370 (393)
T ss_pred HHHHHHHHHHHH-hhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 666677778888 666666778888888766654 79999999999999999998887765 3 34444444444
No 185
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.15 E-value=3.1e-07 Score=82.58 Aligned_cols=291 Identities=12% Similarity=0.120 Sum_probs=172.4
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHH-HHhhhhhhhhcCcchhhh
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVM-MPVIGNLSDQYGRKAMLT 85 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~-~~~~G~l~dr~Grk~~l~ 85 (357)
.+.+....+..|+..+++++.-|.=..+.. +..+.......++-+...+...+. .++.+++++|++|++.+-
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~lKD~lvv-------~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~ 78 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRDTKDTLVV-------TAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFY 78 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhheee-------cccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHH
Confidence 345566666667776776665544222211 111112234566666666666666 899999999999999988
Q ss_pred HHHHHHHHHHHHHHHc--cchhH--------------------------HHHHHHHHHHhhhcccchHHHHHHHHHhhCC
Q 018388 86 LPLTLSIIPLAILAYR--RSISF--------------------------FYAYYALRTLTAMVCEGSINCLALAYVADNI 137 (357)
Q Consensus 86 ~~~~~~~~~~~~~~~~--~~~~~--------------------------~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~ 137 (357)
.....+.....++++. ++.+. .|...+..+...+.+.-...-....+.+|.+
T Consensus 79 ~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~ 158 (472)
T TIGR00769 79 TVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQIT 158 (472)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8777776666665554 11000 2223333444444222222226778899999
Q ss_pred CccchhHHHHHHHHHHHHHHHhhHhhhHHhh------------hH----HHHHHHHHHHHHHHHHHHHhccCCCCCCCCC
Q 018388 138 SERQRASAFGILLGVLSASFVCGTLAARFLS------------TT----SAFQAATIVSMLAAAYMRVFLKDDVPNDDDD 201 (357)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~------------~~----~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 201 (357)
+.+|-.|..++...+.++|.++|+.+..++. |. ..+.+.++...+...+ ...+.+....+++.
T Consensus 159 t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~-~~~l~~~~~~~~~~ 237 (472)
T TIGR00769 159 TIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILL-YWWVNRNVLTDPRS 237 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcccCCccc
Confidence 9999999999999999999999998877653 21 2233333333333333 33333222111110
Q ss_pred CCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCc
Q 018388 202 DLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNK 281 (357)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 281 (357)
.+ .+ + ++++++.+....+..+.+.++|.++...+...+++......+...-..+++.+- ++
T Consensus 238 ~~-------------~~--~---~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~ 298 (472)
T TIGR00769 238 YN-------------PA--L---KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SP 298 (472)
T ss_pred cc-------------hh--h---ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CH
Confidence 00 00 0 111112233566777778889999888888888877777776655556666542 33
Q ss_pred ch----HHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHH
Q 018388 282 NQ----FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (357)
Q Consensus 282 ~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i 325 (357)
++ .|.+....++...+.+ ++.+++.+|+|-+....+.-+...+
T Consensus 299 ~~~~~f~g~~~~~~gi~tl~~~-l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 299 NEYSAFMGDFSTWTGVVSVTMM-LLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 22 4555566666666667 5559999999987765554444433
No 186
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.14 E-value=7.5e-09 Score=93.04 Aligned_cols=135 Identities=16% Similarity=0.093 Sum_probs=84.8
Q ss_pred chhHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHH---HHcc-chhHHHHHHHHHH----H
Q 018388 46 CSLAIYLSGFQQAIIG-LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAIL---AYRR-SISFFYAYYALRT----L 116 (357)
Q Consensus 46 ~~~s~~~~g~~~~~~~-~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~r~----l 116 (357)
.+.+..+.|++.+... ++..++.++.|++.||+|||+.+..+..+..+..+.. +..+ + .+.+.+.-+ .
T Consensus 240 ~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~---~~~~~~~~~~~~~~ 316 (402)
T PRK11902 240 AGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKH---LWTMALAIGIENLC 316 (402)
T ss_pred cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCc---HHHHHHHHHHHHHH
Confidence 3555667788776544 4678899999999999999998877776655554333 3433 3 344444443 3
Q ss_pred hhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhH----HhhhHHHHHHHHHHHHHHHHHHH
Q 018388 117 TAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR----FLSTTSAFQAATIVSMLAAAYMR 188 (357)
Q Consensus 117 ~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~----~l~~~~~f~~~~~~~~~~~~~~~ 188 (357)
.|+ ..+...+....++.+..|.++++ ..+...++|...++.++| .+||+..|.+.++++++..++.+
T Consensus 317 ~g~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 317 GGM-GTAAFVALLMALCNRSFSATQYA----LLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHH-HHHHHHHHHHHhcCCCCcHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 444 33444556666667766655554 344444455543434444 45899999999888777655543
No 187
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.13 E-value=2.9e-09 Score=98.56 Aligned_cols=137 Identities=16% Similarity=0.148 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccch-hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCC
Q 018388 59 IIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI-SFFYAYYALRTLTAMVCEGSINCLALAYVADNI 137 (357)
Q Consensus 59 ~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~ 137 (357)
+..++..++.+..++++||+|||+.++.+..+.+++..+.....+. .....+...-+...+++.+ ..+....+.+|.+
T Consensus 343 ~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~E~~ 421 (502)
T TIGR00887 343 IALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFG-PNATTFIVPGEVF 421 (502)
T ss_pred HHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcC-CCchhhhhhhccC
Confidence 3445666788899999999999999988887777666555543210 0011111111111111112 2245667789999
Q ss_pred CccchhHHHHHHHHHHHHHHHhhHhhhHHh-h-------------hHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 018388 138 SERQRASAFGILLGVLSASFVCGTLAARFL-S-------------TTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (357)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-~-------------~~~~f~~~~~~~~~~~~~~~~~~~e~~~~ 197 (357)
|.+.|+++.++.+....+|..++|.+.+++ . +...|++.++..++..+. .+++||++.+
T Consensus 422 p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~~~ 494 (502)
T TIGR00887 422 PTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPETKGK 494 (502)
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH-heEeccCCCC
Confidence 999999999999999999999999887764 2 244667776665655444 4667987654
No 188
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.13 E-value=1.9e-09 Score=96.70 Aligned_cols=128 Identities=13% Similarity=0.050 Sum_probs=96.7
Q ss_pred HhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-cCcchhhhHHHHHHHHHHHHHHHccchhH
Q 018388 28 VPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTLPLTLSIIPLAILAYRRSISF 106 (357)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~Grk~~l~~~~~~~~~~~~~~~~~~~~~~ 106 (357)
...+|.+.++..+ +....|++.+...++......+.+++.|| ++.|+.+..+..+..++..+...+++
T Consensus 228 ~~~~p~~~~~~~~--------~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~--- 296 (400)
T PRK11646 228 MLMLPIMVNDIAG--------SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSN--- 296 (400)
T ss_pred HHhhhhhHHhhcC--------CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhh---
Confidence 3456777765311 12345777777777666666666777664 66677777888788888777777777
Q ss_pred HHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 107 FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 107 ~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
++.+.+...+.++ +.+...|...+++.|..|+++|++.++..+....+|..+||.++|.+
T Consensus 297 ~~~~~~~~~l~~~-g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l 356 (400)
T PRK11646 297 LQQLFTLICLFYI-GSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWL 356 (400)
T ss_pred HHHHHHHHHHHHH-HHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHH
Confidence 6666666777777 55666678889999999999999999999999999999999999986
No 189
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.13 E-value=3.1e-09 Score=91.43 Aligned_cols=177 Identities=12% Similarity=0.063 Sum_probs=132.7
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc--Ccchhh
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY--GRKAML 84 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~--Grk~~l 84 (357)
++.++.+.++.++..+....+.--.|.|+.| ..+.+....++..+.+-.+.+.+++++|+++||. |||.+.
T Consensus 251 Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e-------~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~ 323 (448)
T COG2271 251 NKLIWLLALANVFVYVVRYGINDWGPLYLSE-------VKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPM 323 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-------hcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchH
Confidence 5678888999999989888888888999886 3345556678999999999999999999999996 677655
Q ss_pred h-HHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHH-HHHhhHh
Q 018388 85 T-LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSA-SFVCGTL 162 (357)
Q Consensus 85 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~ 162 (357)
- ++.+...++.+..-.+++. .++...++-++.|+.-.|.. -..-....|..|++--|.+.|..+.+..+ |...+..
T Consensus 324 ~~i~~~~i~~~~~~~w~~~~~-~~~l~~~~l~~iGf~IyGPq-mLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~ 401 (448)
T COG2271 324 ALIFMLLITASLVLYWLAPNG-SYLLDAILLFIIGFLIYGPQ-MLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGL 401 (448)
T ss_pred HHHHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHHHHHhhHH-HHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCC
Confidence 4 4455555555566666653 25667777888888444444 35666678999999999999999999988 7777766
Q ss_pred hhHHh----hhHHHHHHHHHHHHHHHHHHHHhcc
Q 018388 163 AARFL----STTSAFQAATIVSMLAAAYMRVFLK 192 (357)
Q Consensus 163 ~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (357)
.-+++ ||...|.+..+.++++.++......
T Consensus 402 ~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 402 PLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred cceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 65554 8998888877766665555444333
No 190
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.11 E-value=2.4e-09 Score=96.47 Aligned_cols=160 Identities=13% Similarity=0.021 Sum_probs=102.0
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchh-hhHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAM-LTLPL 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~-l~~~~ 88 (357)
++...+..+............+|.++++. ..+.+....+...+...++..++.+..|+++||++||+. .....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~------~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~ 317 (412)
T TIGR02332 244 IMLYTLAYFCLTNTLSAINIWTPQILQSF------NQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPY 317 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHH
Confidence 33444444555555666677888888652 123344567888899999999999999999999998775 33344
Q ss_pred HHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-
Q 018388 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (357)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l- 167 (357)
+...++..+....++ ......+-.+.++ +.....+.......|..|+|+|++++|+.+....+|..++|.+.+.+
T Consensus 318 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~ 393 (412)
T TIGR02332 318 LFAAAGWLLASATDH---NLIQLLGIIMASM-GSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILK 393 (412)
T ss_pred HHHHHHHHHHHhcCC---HHHHHHHHHHHHH-HhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccccc
Confidence 344443322222222 1111111122222 21122233444556778999999999999999999999999887764
Q ss_pred ----hhHHHHHHHHHH
Q 018388 168 ----STTSAFQAATIV 179 (357)
Q Consensus 168 ----~~~~~f~~~~~~ 179 (357)
+|++.+++.+++
T Consensus 394 ~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 394 DATGSFNSGLWFVAAL 409 (412)
T ss_pred ccCCCCchhHHHHHHH
Confidence 488888766554
No 191
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.11 E-value=1.3e-08 Score=91.20 Aligned_cols=131 Identities=11% Similarity=0.115 Sum_probs=95.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHH-HHHHHHHHHHccchhHHHHHHHHHHHhhhcccchH
Q 018388 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL-SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSI 125 (357)
Q Consensus 47 ~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 125 (357)
+.+....|+....+.++..++.++.|++.||.+ |+.+..+..+ ......+....++ .+.+.+..++.|+ +.+..
T Consensus 248 g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~l~G~-~~~~~ 322 (394)
T PRK10213 248 GFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSD---KIVATGVAIIWGL-TFALV 322 (394)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHH-HHHhh
Confidence 444556788889999999999999999999964 4444444333 3333444445555 6667778888898 66777
Q ss_pred HHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHHHHHH
Q 018388 126 NCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLA 183 (357)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~~~~~ 183 (357)
.+...+++.+..| +++++..+......++|..+||.++|.+ |++..+...+.+..+.
T Consensus 323 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 323 PVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred hHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 7788888888887 5567888888888899999999999886 5677777766554443
No 192
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.09 E-value=3.7e-09 Score=90.96 Aligned_cols=172 Identities=16% Similarity=0.094 Sum_probs=127.6
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
+++.|.+.+..+..+-+.--....+|.|.++ +++.+....|...+.+.+...+..+.+|+++||+|.+|++..
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~-------~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~ 289 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVT-------QFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLA 289 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHH
Confidence 4566777777776666666667788999876 566667777899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcc-------ch-hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHH
Q 018388 87 PLTLSIIPLAILAYRR-------SI-SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFV 158 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 158 (357)
.....+++..+....+ +. .....++...+..|+ +.| ..+.++...+| ++-+.+.|+.....++|..
T Consensus 290 ~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~-GnG----svfk~Ip~if~-~~~G~v~G~vga~G~lGGf 363 (417)
T COG2223 290 VFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGL-GNG----SVFKMIPVIFP-KETGAVTGIVGAIGGLGGF 363 (417)
T ss_pred HHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhcc-Ccc----hheeechHHHH-hhhhHHHHHHHHhcccccc
Confidence 9888888887777664 21 112345566666776 333 34556666665 4778899999999999987
Q ss_pred hhHhhhHHh-----hhHHHHHHHHHHHHHHHHHHHHhc
Q 018388 159 CGTLAARFL-----STTSAFQAATIVSMLAAAYMRVFL 191 (357)
Q Consensus 159 ~g~~~~~~l-----~~~~~f~~~~~~~~~~~~~~~~~~ 191 (357)
.-|..-+.. .++..|++...+.+++.+..+...
T Consensus 364 ~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 364 FLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred chhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777665543 478888888888777766655433
No 193
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.08 E-value=1.4e-08 Score=90.82 Aligned_cols=151 Identities=17% Similarity=0.149 Sum_probs=108.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccc----h-hHHH-HHHHHHHHhhhc
Q 018388 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRS----I-SFFY-AYYALRTLTAMV 120 (357)
Q Consensus 47 ~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~----~-~~~~-~~~~~r~l~G~~ 120 (357)
+.+....-+......+...+.++....+.||+|||+.++.+..+..+..+++..... . .+.+ ..+++.++..+.
T Consensus 301 G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~ 380 (485)
T KOG0569|consen 301 GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIIS 380 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 344444566666678888999999999999999999999999888888777665421 1 1111 122333333331
Q ss_pred -ccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhh----HhhhHHhhhHHHHHHHHHHHHHHHHHHHHhccCCC
Q 018388 121 -CEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG----TLAARFLSTTSAFQAATIVSMLAAAYMRVFLKDDV 195 (357)
Q Consensus 121 -~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g----~~~~~~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~ 195 (357)
+.|. -|...-+.+|.+|++.|+.+++......-+...+- |.+-..+|- +.|.+..+.+.+..+..++.+||++
T Consensus 381 f~~G~-gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 381 FAIGP-GPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred hhcCC-CchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 3333 37888999999999999999999888777665443 444455555 7788888888888889999999998
Q ss_pred CCCC
Q 018388 196 PNDD 199 (357)
Q Consensus 196 ~~~~ 199 (357)
.+..
T Consensus 459 gr~~ 462 (485)
T KOG0569|consen 459 GRTP 462 (485)
T ss_pred CCCH
Confidence 6543
No 194
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.07 E-value=3.2e-09 Score=93.83 Aligned_cols=136 Identities=13% Similarity=0.088 Sum_probs=100.9
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIG-LGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~-~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
++.+.+..++...........+|.+.++ .+.+..+.|.+.++.. ++..++.+++|++.||+|||+.+..+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~ 282 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD--------MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFG 282 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 4444445555556666666778888764 2444556677776655 567889999999999999999988888
Q ss_pred HHHHHHHHHHHHc-cch-------hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHH
Q 018388 89 TLSIIPLAILAYR-RSI-------SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLS 154 (357)
Q Consensus 89 ~~~~~~~~~~~~~-~~~-------~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 154 (357)
++..+...+..+. .+. ...+.+..+.++.++ +.+...+...+++.|.+|+|+|++.+++.+...+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 283 IVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAV-TGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHH-HhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 8877776655543 111 125667778888888 7788889999999999999999999999887654
No 195
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.07 E-value=1.5e-09 Score=95.59 Aligned_cols=141 Identities=18% Similarity=0.185 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhH-HHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHH
Q 018388 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLA-IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (357)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~ 91 (357)
.....+...+........+|.+.++ +.+.+ ..+.+...++..+...++.++.|+++||+|+|+.........
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 283 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQE-------VLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLL 283 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCH-------HHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhh-------ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 4445555555666677778887443 33444 567788899999999999999999999999988888777777
Q ss_pred HHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhH
Q 018388 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (357)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (357)
.+.................+..-++.|+ +.+...+...+++.|..|+|+|+++.+..+...++|..+||
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 284 ILGALGLLLLPFSSSPVWLIIALFLIGF-GFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHCCSHHHCHHHHHHHHHHHHHH-HHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 7766666555432224566667788888 77777899999999999999999999999999999999987
No 196
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.06 E-value=1.9e-08 Score=89.59 Aligned_cols=144 Identities=15% Similarity=0.065 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHH
Q 018388 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~ 90 (357)
....+..++...+........|.+..+ +.+.+..+.|+..+...++..++.++.|++.||+|||+.+..+..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~ 269 (377)
T PRK11102 197 LGYMLASGFSFAGMFSFLTAGPFVYIE-------LNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWI 269 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHH-------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 333344444444444555555666554 2344556779999999999999999999999999999998888766
Q ss_pred HHHHHHHHHH---cc-chhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHH-HHHHHHhhHhhhH
Q 018388 91 SIIPLAILAY---RR-SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGV-LSASFVCGTLAAR 165 (357)
Q Consensus 91 ~~~~~~~~~~---~~-~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~ 165 (357)
..+..+.... .+ + .+...++-.+.+. ..+...+.....+.|..| ++|+++.+..... .++|..+|+.+++
T Consensus 270 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 270 QFIMGIWLVVSALLDLG---FWALVVGVAAFVG-CVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHhhh---HHHHHHHHHHHHH-HHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4443332221 12 2 3333333333333 333444555666777666 7899998887554 4577777777654
Q ss_pred H
Q 018388 166 F 166 (357)
Q Consensus 166 ~ 166 (357)
.
T Consensus 345 ~ 345 (377)
T PRK11102 345 A 345 (377)
T ss_pred c
Confidence 3
No 197
>PRK09848 glucuronide transporter; Provisional
Probab=99.06 E-value=3.8e-09 Score=96.37 Aligned_cols=152 Identities=11% Similarity=0.079 Sum_probs=108.9
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
+|.+....+..++...+........|.+.++ ..+.+....++......++..++.++++++.||+|+|+.+..
T Consensus 227 n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~ 299 (448)
T PRK09848 227 NRPLFMLCIGALCVLISTFAVSASSLFYVRY-------VLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLI 299 (448)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhheeeEee-------ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 3455555566666666655555556666543 223333444454454567778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCcc-------chhHHHHHHHHHHHHHHHh
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER-------QRASAFGILLGVLSASFVC 159 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~ 159 (357)
+.++..++.+...+.++.. .+.+++..++.|+ +.+...+...++.+|..|++ ++|...+..+....+|..+
T Consensus 300 g~~~~~i~~~~~~~~~~~~-~~~~~~~~~l~g~-G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~ai 377 (448)
T PRK09848 300 GALLGTCGYLLFFWVSVWS-LPVALVALAIASI-GQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAI 377 (448)
T ss_pred HHHHHHHHHHHHHHcCchh-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHH
Confidence 9988888877776654211 5556667778888 66777788899999988754 3588889999999999999
Q ss_pred hHhhhHHh
Q 018388 160 GTLAARFL 167 (357)
Q Consensus 160 g~~~~~~l 167 (357)
|+.+.+.+
T Consensus 378 g~~i~g~~ 385 (448)
T PRK09848 378 GGSIPAFI 385 (448)
T ss_pred HHHHHHHH
Confidence 98877653
No 198
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.06 E-value=9.9e-09 Score=90.65 Aligned_cols=146 Identities=14% Similarity=0.077 Sum_probs=103.6
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-CcchhhhHH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLP 87 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-Grk~~l~~~ 87 (357)
.++...+..++...........+|.+.++ .+.+..+.|...+...++..++.++.|++.||+ +||+.+..+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--------~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~ 269 (355)
T TIGR00896 198 LAWQVTVFFGLQSGLYYSLIGWLPAILIS--------HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVL 269 (355)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHH
Confidence 34444444444445555556677888764 234456678999999999999999999999999 566677777
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCC-ccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
..+..++...+.+.++. ... ..-++.|+ +.+...+...+.+.+..+ +++++...++.+....+|..+||.+.|.
T Consensus 270 ~~~~~~~~~~~~~~~~~---~~~-~~~~l~g~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~ 344 (355)
T TIGR00896 270 AVLQLVGLCGLLFAPMH---GLW-AWALVLGL-GQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGV 344 (355)
T ss_pred HHHHHHHHHHHHHhhhh---HHH-HHHHHHHH-hhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777766666542 111 13456788 667777777777765554 5677888998888888888999998887
Q ss_pred h
Q 018388 167 L 167 (357)
Q Consensus 167 l 167 (357)
+
T Consensus 345 l 345 (355)
T TIGR00896 345 L 345 (355)
T ss_pred H
Confidence 6
No 199
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.05 E-value=2.2e-08 Score=91.69 Aligned_cols=175 Identities=15% Similarity=0.144 Sum_probs=125.0
Q ss_pred hHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhh----hhhh-cCcchhh-
Q 018388 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGN----LSDQ-YGRKAML- 84 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~----l~dr-~Grk~~l- 84 (357)
..+++...+....+.-..+.++.+.++..+.+...++++ .+++.++..+...+.+|+..+ +.|| .+++...
T Consensus 275 l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip---~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k 351 (475)
T TIGR00924 275 IVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVP---VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLK 351 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEEC---HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHH
Confidence 344444555555555556667877776543332333433 478888888888888888664 4444 3333433
Q ss_pred -hHHHHHHHHHHHHHHH---------ccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHH
Q 018388 85 -TLPLTLSIIPLAILAY---------RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLS 154 (357)
Q Consensus 85 -~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 154 (357)
.++.++.+++....++ ..| ++++.+..++.++ +.....|...+++.+..|++.|++.+|.+.....
T Consensus 352 ~~~G~~l~~~~~~~~~~~~~~~~~~~~~s---~~~~i~~~~~~~~-ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~ 427 (475)
T TIGR00924 352 FTLGMLFCGASFLTFAASIWFADAGGLTS---PWFMVLIYLFQTL-GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQA 427 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccC---HHHHHHHHHHHHH-HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 6778887777777664 235 7888999999999 8899999999999999999999999999999999
Q ss_pred HHHHhhHhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhcc
Q 018388 155 ASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLK 192 (357)
Q Consensus 155 ~g~~~g~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (357)
+|..+++.++... +|...|...++..++..++.++..|
T Consensus 428 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 428 MGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998887764 5677777776665555555444333
No 200
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.05 E-value=5.1e-09 Score=93.10 Aligned_cols=150 Identities=12% Similarity=-0.016 Sum_probs=99.1
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCc-chhhhH-
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR-KAMLTL- 86 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Gr-k~~l~~- 86 (357)
.++.+.+..+.............|.+.++ +.+.+..+.++..+...++..++.++.|+++||.++ |+....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~ 289 (379)
T TIGR00881 217 VLWYISLGYVFVYVVRTGILDWSPLYLTQ-------EKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAV 289 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHH
Confidence 34445555566666666666777888765 234455667888899999999999999999998643 333222
Q ss_pred HH-HHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhH
Q 018388 87 PL-TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (357)
Q Consensus 87 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 165 (357)
.. ....++.......+... .+...+..++.|+ ......+....+..|..|+++|+++.++.+....+|..++|.+.|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 367 (379)
T TIGR00881 290 FFMALIIVSLLVYWLNPAAN-PLMDLICLFALGF-LVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLG 367 (379)
T ss_pred HHHHHHHHHHHHHhcCcchh-HHHHHHHHHHHHH-HHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHH
Confidence 11 11122222222211111 3445556666676 333333556778899999999999999999999999999998888
Q ss_pred Hh
Q 018388 166 FL 167 (357)
Q Consensus 166 ~l 167 (357)
.+
T Consensus 368 ~l 369 (379)
T TIGR00881 368 YL 369 (379)
T ss_pred HH
Confidence 76
No 201
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.04 E-value=2.5e-08 Score=89.07 Aligned_cols=145 Identities=12% Similarity=0.082 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHH
Q 018388 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~ 90 (357)
+...+................|.+.++ +.+.+..+.|++.+...++..++.++.|++.||+|||+.+..+..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~ 281 (385)
T TIGR00710 209 WGYALIYGASFGGFFAFFSGAPFVYID-------IMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLIL 281 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHcChHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 333333333333444445556766654 2344556678888999999999999999999999999998888777
Q ss_pred HHHHHHHHHHccc--hhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHH-HHHHhhHhhh
Q 018388 91 SIIPLAILAYRRS--ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLS-ASFVCGTLAA 164 (357)
Q Consensus 91 ~~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~-~g~~~g~~~~ 164 (357)
..++..+...... ......+....++.|+ +.+...+.......|..| ++|+++.+..+.... .|.+.+|.++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 282 FAVSAVLLEITAILGLGSWAMIIGPMMFVGI-GNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHH-HHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777666554321 0113444556677777 556666778888888776 688999998876654 4566666655
No 202
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.03 E-value=2.9e-08 Score=85.62 Aligned_cols=156 Identities=12% Similarity=0.014 Sum_probs=111.5
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
.++...+..|+.......+....+.|+++ ....+.+..+.++..+.+..+..++.+..+++.||+|+|+.+..+.
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~-----~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~ 215 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSD-----PHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNA 215 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 44444455555444555666677888864 1235667788899999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-
Q 018388 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (357)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l- 167 (357)
.+..++.++....++ ... ...-++.|+ +.+..+|...+...+..|+ +.+++.++. ....+|..++|.+.|.+
T Consensus 216 ~l~~~~~~l~~~~~~---~~~-~~~~~l~g~-~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~la 288 (310)
T TIGR01272 216 FLAVLLSIGAALTHG---YVA-MWFVLALGL-FNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLA 288 (310)
T ss_pred HHHHHHHHHHHHcCC---HHH-HHHHHHHHH-HHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHH
Confidence 887777766655554 222 224446787 6677789989998888774 345666665 56678889999877776
Q ss_pred ---hhHHHHHHH
Q 018388 168 ---STTSAFQAA 176 (357)
Q Consensus 168 ---~~~~~f~~~ 176 (357)
+.+..|++.
T Consensus 289 d~~g~~~a~~v~ 300 (310)
T TIGR01272 289 DCLGIQLAFALP 300 (310)
T ss_pred HhccchHHHHHH
Confidence 445666544
No 203
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.03 E-value=5e-09 Score=95.64 Aligned_cols=172 Identities=18% Similarity=0.271 Sum_probs=140.6
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcC--cchhhh
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG--RKAMLT 85 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~G--rk~~l~ 85 (357)
+.+..+.+...+..++.......+|.+.++ .+.+..+.+.+.++..+...++.+..|+++|+.. ++....
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~--------~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~ 369 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKS--------LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFL 369 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHH
Confidence 456677777788888888888888888763 3444566788899999999999999999999988 445566
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhH
Q 018388 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (357)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 165 (357)
++.+..+++...+.++++ ++.+.....+.|+ +.|.........+.|..+.++-+.+.|+.....+++.++||.++|
T Consensus 370 ~~ll~~gl~~~~~p~~~~---~~~l~~~~~~fG~-~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag 445 (509)
T KOG2504|consen 370 LTLLIAGLARLFLPFATT---YVGLIVFSILFGF-CVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAG 445 (509)
T ss_pred HHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccce
Confidence 788888888888999999 8889999999999 778876666678899999999999999999999999999999999
Q ss_pred Hh-----hhHHHHHHHHHHHHHHHHHHHHhcc
Q 018388 166 FL-----STTSAFQAATIVSMLAAAYMRVFLK 192 (357)
Q Consensus 166 ~l-----~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (357)
++ +|...|+..++..++...+ ++..|
T Consensus 446 ~~~d~tg~Y~~~f~~~g~~~~~s~~~-~~~~~ 476 (509)
T KOG2504|consen 446 LLYDITGNYDHAFYFCGLCFLLSAVL-LLILR 476 (509)
T ss_pred eeeeccCCeeeehhhcChHHHHHHHH-HHHhH
Confidence 76 4778888888776655544 33344
No 204
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.03 E-value=2.9e-08 Score=87.85 Aligned_cols=170 Identities=16% Similarity=0.083 Sum_probs=106.2
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCc---chhh
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR---KAML 84 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Gr---k~~l 84 (357)
+.++.+.+..+............+|.++++. .++. . .+...++..+...++ .++++||..| |+..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~------g~s~--~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~ 259 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRPA------GLED--I-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIY 259 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCh--H-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHH
Confidence 4456666667777677666677889998652 1121 1 244444444444444 4677777654 3333
Q ss_pred hH-HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhh
Q 018388 85 TL-PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA 163 (357)
Q Consensus 85 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 163 (357)
.. ..+..++.........+ .+...+.-.+.++ ......+...++.+|.+|+|.|+++.|+.+....+|...+|.+
T Consensus 260 ~~~~~~~~a~~~~~~~~~~~---~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~ 335 (368)
T TIGR00903 260 IRAAALLIAAFFLALAFELN---RLALFAFIGIAGL-LMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALA 335 (368)
T ss_pred HHHHHHHHHHHHHHHHHccc---cHHHHHHHHHHHH-hhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHH
Confidence 32 33334444444444444 3333344455555 4444556678899999999999999999999999999888877
Q ss_pred hHHh--hhHHHHHHHHHHHHHHHHHHHHhccCC
Q 018388 164 ARFL--STTSAFQAATIVSMLAAAYMRVFLKDD 194 (357)
Q Consensus 164 ~~~l--~~~~~f~~~~~~~~~~~~~~~~~~~e~ 194 (357)
.+.+ +-+..|.+.++..++..+... .++++
T Consensus 336 ~~~~~~~~~~~f~~~~~~~~i~~~~~~-~~~~~ 367 (368)
T TIGR00903 336 AMLFISSAEAYFTFLAILITIAFAIAL-LLPND 367 (368)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHH-hCCCC
Confidence 7654 566777777777666655543 33543
No 205
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.02 E-value=1.7e-08 Score=91.51 Aligned_cols=149 Identities=18% Similarity=0.192 Sum_probs=122.1
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
+|.+..+....++..++..+.....+.+.++..+.+ ...+....+..++..++.+++++++||+|+|+.+..
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~--------~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~ 295 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE--------GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYII 295 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc--------hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhh
Confidence 466777888888888888888888888888754322 234666778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcc--chhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCcc-------chhHHHHHHHHHHHHHH
Q 018388 87 PLTLSIIPLAILAYRR--SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER-------QRASAFGILLGVLSASF 157 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~ 157 (357)
+.++.+++.++..+.+ + .+.+++..++.|+ +.+...+...++++|..+.+ +.|...+..+...-+|.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~---~~~~~i~~~l~gi-~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~ 371 (428)
T PF13347_consen 296 GLLLAALGFLLLFFLGPGS---PWLVLILFILAGI-GYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQ 371 (428)
T ss_pred hHHHHHHHHHHHHHHHhhh---HHHHHHHHHHhHh-hhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHH
Confidence 9999999999888876 6 7888999999999 66777788999999998743 34677788888888888
Q ss_pred HhhHhhhHHh
Q 018388 158 VCGTLAARFL 167 (357)
Q Consensus 158 ~~g~~~~~~l 167 (357)
.+++.+.+.+
T Consensus 372 ~la~~i~g~~ 381 (428)
T PF13347_consen 372 GLAGAIVGLL 381 (428)
T ss_pred HHHHHHHHHH
Confidence 8888776653
No 206
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.01 E-value=2.3e-08 Score=91.74 Aligned_cols=168 Identities=14% Similarity=0.020 Sum_probs=107.0
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhh--
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT-- 85 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~-- 85 (357)
+.++...+..+............+|.|+++. .+.+..+.|+..++..++..++.++.|+++||+++|+...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-------~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~ 333 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWV-------LRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLT 333 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHH
Confidence 3455666666667677777777889888763 3445566789999999999999999999999987654321
Q ss_pred ------HHHHHH--HHHHHHHHH-ccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHH
Q 018388 86 ------LPLTLS--IIPLAILAY-RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSAS 156 (357)
Q Consensus 86 ------~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 156 (357)
.+.... .+....... ..+ .+..++.-.+.+. ..+...+.......|..| +.++.++++.+....+|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~ 408 (465)
T TIGR00894 334 AARKIFNGIGGLGPGIFAYALPYLSAA---FYLTIIILTLANA-VSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIG 408 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCc---hHHHHHHHHHHHH-HhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHH
Confidence 111111 111111112 222 3333333334343 333333444445556666 58999999999999999
Q ss_pred HHhhHhhhHHh-------hhHHHHHHHHHHHHHHHHHH
Q 018388 157 FVCGTLAARFL-------STTSAFQAATIVSMLAAAYM 187 (357)
Q Consensus 157 ~~~g~~~~~~l-------~~~~~f~~~~~~~~~~~~~~ 187 (357)
..++|.+.+.+ +|+..|.+.++..++..+..
T Consensus 409 ~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~ 446 (465)
T TIGR00894 409 GLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFY 446 (465)
T ss_pred HHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHe
Confidence 99999888764 37788888877766655443
No 207
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.01 E-value=2.9e-08 Score=89.07 Aligned_cols=175 Identities=13% Similarity=0.033 Sum_probs=104.1
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
++.+.+.+..+..+-+.......+|.+.++..+ + .+ ......+..+...+..|++|+++||+|+|+++..+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~----~--~~---~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~ 322 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP----D--VN---ILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLIN 322 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----h--HH---HHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHH
Confidence 345555555555544444455577888765321 1 11 12222345677888899999999999999999988
Q ss_pred HHHHHHHHHHHH-Hccc--hhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCc---------------------cchh
Q 018388 88 LTLSIIPLAILA-YRRS--ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE---------------------RQRA 143 (357)
Q Consensus 88 ~~~~~~~~~~~~-~~~~--~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~---------------------~~r~ 143 (357)
.+...+...... ..+. ...++.+.+..+...+ +.|.-....+.++.+.+|+ ++-|
T Consensus 323 ~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~-~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g 401 (462)
T PRK15034 323 FIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFL-TAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETA 401 (462)
T ss_pred HHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHH-HhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHH
Confidence 876666653322 2221 0114444443333333 2233334566667666663 1445
Q ss_pred HHHHHHHHHHHHHHHhhHhhhHHh-----hhHHHHHHHHHHHHHHHHHHHHhcc
Q 018388 144 SAFGILLGVLSASFVCGTLAARFL-----STTSAFQAATIVSMLAAAYMRVFLK 192 (357)
Q Consensus 144 ~~~~~~~~~~~~g~~~g~~~~~~l-----~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (357)
.+.|+.+....+|..+-|.+-+.. ++...|+...+..+++..+.|.+.-
T Consensus 402 ~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 402 AALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred HHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 677888888888777777554443 3566777777777777777666543
No 208
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.00 E-value=6.7e-08 Score=86.59 Aligned_cols=138 Identities=12% Similarity=-0.127 Sum_probs=84.5
Q ss_pred HhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHH
Q 018388 28 VPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFF 107 (357)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~ 107 (357)
....|.+.++ +.+.+..+.|...+...++..++.++.|++.||+|||+.+..+..+..++.....+.++ .
T Consensus 223 ~~~~~~~~~~-------~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~---~ 292 (392)
T PRK10473 223 VNTSPVLLME-------QMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPS---H 292 (392)
T ss_pred HHhCHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 3444555544 23444556788888899999999999999999999999999998888888877777665 3
Q ss_pred HHHHHHHHHhhhcccchHHHHHHHHHhhCCCccch-hHHHHHHHHHHHHHHHhhHhhhHHhhhHHHHHHHHH
Q 018388 108 YAYYALRTLTAMVCEGSINCLALAYVADNISERQR-ASAFGILLGVLSASFVCGTLAARFLSTTSAFQAATI 178 (357)
Q Consensus 108 ~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r-~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~f~~~~~ 178 (357)
+.....-.+.+. +.+...+. ....+..|.++| +.+.+.......+|..+++.+.+.+++.....+.+.
T Consensus 293 ~~~~~~~~l~~~-g~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~ 361 (392)
T PRK10473 293 AVSLFGITLICA-GFSVGFGV--AMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGI 361 (392)
T ss_pred HHHHHHHHHHHH-HHHHHhHH--HHHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 322333333333 21222222 233344454444 445555555555666666666666666544444433
No 209
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.98 E-value=3.7e-08 Score=80.29 Aligned_cols=148 Identities=17% Similarity=0.208 Sum_probs=110.5
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
+..++.+....++......=....-|.+.++ .+++|+...|-+.+.......+.+|+.|.++||+|++..++.
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~-------rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~ 335 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQK-------RFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVA 335 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHH-------hhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHH
Confidence 4557777777666666655445555666554 567777777888888888889999999999999999998887
Q ss_pred HHHH-HHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhH
Q 018388 87 PLTL-SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (357)
Q Consensus 87 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 165 (357)
+..+ ..++.....++. +.=+.+..+.|+ +....-......++..+|+++.|++.+..+...++|..+.|+++|
T Consensus 336 ~a~~~tl~~H~~l~Ft~-----lsPy~~m~~lGL-sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag 409 (459)
T KOG4686|consen 336 SACILTLLGHSGLFFTF-----LSPYTSMTFLGL-SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAG 409 (459)
T ss_pred HHHHHHHHHhhhHHhhh-----ccHHHHHHHHhh-hHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhh
Confidence 6554 444555544432 222466777788 655554446678889999999999999999999999999999999
Q ss_pred Hh
Q 018388 166 FL 167 (357)
Q Consensus 166 ~l 167 (357)
.+
T Consensus 410 ~i 411 (459)
T KOG4686|consen 410 FI 411 (459)
T ss_pred ee
Confidence 86
No 210
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.94 E-value=6.7e-08 Score=86.65 Aligned_cols=148 Identities=10% Similarity=-0.003 Sum_probs=98.1
Q ss_pred HHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH-HHHHHH
Q 018388 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT-LSIIPL 95 (357)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~-~~~~~~ 95 (357)
.+....+........+.+.++. .+.+..+.|+......++..+++.+.+++.||++++........ ...+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 288 (394)
T PRK11652 216 LIGTLAGIAVFEACSGVLMGAV-------LGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLM 288 (394)
T ss_pred HHHHHHHHHHHHHhChHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444444556666542 33445567888888889999999999999999984333222222 222222
Q ss_pred HHHHH--ccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHhhhHHHH
Q 018388 96 AILAY--RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSAF 173 (357)
Q Consensus 96 ~~~~~--~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~f 173 (357)
..... ..+ .+.+....++.|+ +.+...|...++..|..| +++++..++.+....+|..+|+.+++.+..+..+
T Consensus 289 ~~~~~~~~~~---~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~ 363 (394)
T PRK11652 289 WIPGWFGVMN---VWTLLVPAALFFF-GAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQF 363 (394)
T ss_pred HHHHHhcccc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCchH
Confidence 22222 123 4566777788888 667777888998888887 6789999999999999999999999887544434
Q ss_pred HHH
Q 018388 174 QAA 176 (357)
Q Consensus 174 ~~~ 176 (357)
...
T Consensus 364 ~~~ 366 (394)
T PRK11652 364 SLG 366 (394)
T ss_pred HHH
Confidence 433
No 211
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.92 E-value=2e-08 Score=92.22 Aligned_cols=151 Identities=13% Similarity=0.116 Sum_probs=103.5
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
+|.+..+....++............+.+.+... + +....+++.+...++..++.+++++++||+|+|+.+..
T Consensus 230 n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~-------~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~ 301 (473)
T PRK10429 230 NDQLSCLLGMALAYNIASNIINGFAIYYFTYVI-------G-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAG 301 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhheeeEEEEEC-------C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH
Confidence 345555666666666666666555555543221 1 12344666677778889999999999999999999988
Q ss_pred HHHHHHHHHHHHHH---ccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCc-------cchhHHHHHHHHHHHHH
Q 018388 87 PLTLSIIPLAILAY---RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-------RQRASAFGILLGVLSAS 156 (357)
Q Consensus 87 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g 156 (357)
+..+..++.+.... .++ ...+.+++.-++.|+ +.+...+...++++|..+. ++.|...+......-+|
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~g~-~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~ 379 (473)
T PRK10429 302 ASIFPVLSCGVLLLMGLAAP-HNALLIVIAGILLNI-GTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGG 379 (473)
T ss_pred HHHHHHHHHHHHHHHhccCc-hhHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHH
Confidence 88776666555433 121 115556667777887 6667778889999999763 22345788888888899
Q ss_pred HHhhHhhhHHh
Q 018388 157 FVCGTLAARFL 167 (357)
Q Consensus 157 ~~~g~~~~~~l 167 (357)
..+|+.+.|.+
T Consensus 380 ~al~~~i~g~~ 390 (473)
T PRK10429 380 SAFAAFFIGVV 390 (473)
T ss_pred HHHHHHHHHHH
Confidence 99998887764
No 212
>PRK10133 L-fucose transporter; Provisional
Probab=98.91 E-value=1.1e-07 Score=86.25 Aligned_cols=128 Identities=8% Similarity=-0.082 Sum_probs=95.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccch
Q 018388 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGS 124 (357)
Q Consensus 45 ~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~ 124 (357)
..+.+....|+....+.++..++.++.|++.||+|||+++..+.++..+...+..+.++ .+ .+..-.+.|+ +.+.
T Consensus 289 ~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~---~~-~~~~~~l~gl-g~~~ 363 (438)
T PRK10133 289 IPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGG---HV-GLIALTLCSA-FMSI 363 (438)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCC---hH-HHHHHHHHHH-HHHH
Confidence 45677788899999999999999999999999999999999888877777666666555 22 2345567788 6788
Q ss_pred HHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----h-hHHHHHHHHHH
Q 018388 125 INCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----S-TTSAFQAATIV 179 (357)
Q Consensus 125 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~-~~~~f~~~~~~ 179 (357)
..|..++...|..|+ +.+.+.++... ...|..++|.+.|.+ | -|..|++..+.
T Consensus 364 i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~ 421 (438)
T PRK10133 364 QYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALC 421 (438)
T ss_pred HHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 889999999998764 45677777754 445677777777765 3 35556554443
No 213
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.88 E-value=2e-07 Score=80.12 Aligned_cols=160 Identities=23% Similarity=0.289 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHH
Q 018388 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (357)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~ 92 (357)
.....+....+.....+..+.+..+...... . ...++..+.+.+...++.++.|.++||+|||+.+..+.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 80 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLSLSSG-----R-LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFL 80 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcCCCch-----h-HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHH
Confidence 3444455556666767777777765311110 0 356888899999999999999999999999988888877655
Q ss_pred HHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCc-cchhHHHHHHHH-HHHHHHHhhHhhhHHh---
Q 018388 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-RQRASAFGILLG-VLSASFVCGTLAARFL--- 167 (357)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l--- 167 (357)
.+.+...+..+ ...+.+.+.|+.+|+ +.+...+...+++.|..|+ ++|+...+.... ...+|..++|.+++.+
T Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 81 LGTLLLALAPN-VGLALLLILRLLQGL-GGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHhCcc-chHHHHHHHHHHHHh-hhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666654 337888999999999 6677888999999999997 688998888888 5888888888777654
Q ss_pred ---hhHHHHHHHHHHH
Q 018388 168 ---STTSAFQAATIVS 180 (357)
Q Consensus 168 ---~~~~~f~~~~~~~ 180 (357)
+||+.|.......
T Consensus 159 ~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 159 LLWGWRAAFLLAALLG 174 (338)
T ss_pred HhcchHHHHHHHHHHH
Confidence 5888666665553
No 214
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.88 E-value=1.7e-07 Score=76.99 Aligned_cols=119 Identities=18% Similarity=0.120 Sum_probs=89.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccch----hHHHHHHHHHHHhhhc
Q 018388 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI----SFFYAYYALRTLTAMV 120 (357)
Q Consensus 45 ~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~r~l~G~~ 120 (357)
.++.+..+...+.+...+|..+ +++.|.+.||+|+|.++.++.+...++..+...+-+. ..+|.+.+..++.|.
T Consensus 31 ~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~- 108 (250)
T PF06813_consen 31 RLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGN- 108 (250)
T ss_pred HhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcc-
Confidence 3445555667777778888775 5889999999999999999999999998887765211 226777777777776
Q ss_pred ccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 121 CEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 121 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
+.+...+++.....+.+| ++||++.|+.-...+++..+-..+...
T Consensus 109 s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~ 153 (250)
T PF06813_consen 109 SSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSA 153 (250)
T ss_pred cHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHH
Confidence 555555666666678887 689999999999999987665544433
No 215
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.88 E-value=7.5e-08 Score=88.37 Aligned_cols=164 Identities=17% Similarity=0.203 Sum_probs=112.8
Q ss_pred HHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchh-------hhHHHHHHHHH
Q 018388 22 FATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAM-------LTLPLTLSIIP 94 (357)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~-------l~~~~~~~~~~ 94 (357)
....-....++.+.++..+.....+.+. .+++++...+...+.+|+.+++.||.|+|+. +.++.++.+++
T Consensus 283 ~~~~q~~~~l~l~~~~~~~~~~~G~~i~---~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~ 359 (489)
T PRK10207 283 ILYAQMPTSLNFFAINNVHHEILGFSIN---PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLG 359 (489)
T ss_pred HHHHHcccHHHHHHHHhccccccceEEC---HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHH
Confidence 3333334566777765332222222232 2566667777888999999999999999974 66777776666
Q ss_pred HHHHH-----Hccc--hhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 95 LAILA-----YRRS--ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 95 ~~~~~-----~~~~--~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
.+..+ .+.. ....+++....++.|+ +.+...|...+++.+..|++.++.+++.+.....+|..+|..+++..
T Consensus 360 ~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~-Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 360 FLTAAAAGMWFADAQGLTSPWFIVLVYLFQSL-GELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH-HHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 54321 2211 1225677788999999 88999999999999999999999999999999999999998887543
Q ss_pred --------------hhHHHHHHHHHHHHHHHHHHHH
Q 018388 168 --------------STTSAFQAATIVSMLAAAYMRV 189 (357)
Q Consensus 168 --------------~~~~~f~~~~~~~~~~~~~~~~ 189 (357)
...+.|...++..++..++.+.
T Consensus 439 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 439 AVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred ccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1345566666555544444433
No 216
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.87 E-value=1.6e-06 Score=81.77 Aligned_cols=137 Identities=18% Similarity=0.138 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhh-cCcchhhhHHHHHHHHHHHHHHHccch-----hHHHHHHHHHHHhhhcccch
Q 018388 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTLPLTLSIIPLAILAYRRSI-----SFFYAYYALRTLTAMVCEGS 124 (357)
Q Consensus 51 ~~~g~~~~~~~~~~~i~~~~~G~l~dr-~Grk~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~~~~ 124 (357)
.....+...+....-+...++|.++|+ +||++.+.++.++..++..+.+++... ......+++-.+.++ |.|.
T Consensus 23 ~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~-G~Gg 101 (654)
T TIGR00926 23 STSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL-GTGG 101 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh-hccc
Confidence 334445555566666788889999996 699999999999999998888775321 112234455555555 6677
Q ss_pred HHHHHHHHHhhCCCccc---hhHHHHHHHHHHHHHHHhhHhhhHHh-----------hhHHHHHHHHHHHHHHHHHHH
Q 018388 125 INCLALAYVADNISERQ---RASAFGILLGVLSASFVCGTLAARFL-----------STTSAFQAATIVSMLAAAYMR 188 (357)
Q Consensus 125 ~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l-----------~~~~~f~~~~~~~~~~~~~~~ 188 (357)
.-|...+...|.+++++ |.+...++..+.++|..+++.+..++ +|...|.+.++..++.++...
T Consensus 102 iKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 102 IKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred cccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 77899999999987543 56678888888899999888776654 377788888777666555433
No 217
>PRK09669 putative symporter YagG; Provisional
Probab=98.86 E-value=1e-07 Score=86.83 Aligned_cols=151 Identities=13% Similarity=0.075 Sum_probs=99.8
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++.+..+....++...+........+.+.++..+ . ....+.+.....+...++.+++++++||+|+|+.+..
T Consensus 228 n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~--~------~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~ 299 (444)
T PRK09669 228 NSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL--R------PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKW 299 (444)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC--C------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 3445555555555555555544444444433221 1 1123455556677788889999999999999999988
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccc-------hhHHHHHHHHHHHHHHHh
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ-------RASAFGILLGVLSASFVC 159 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~-------r~~~~~~~~~~~~~g~~~ 159 (357)
+.+...+......+.+. +..+.+++..++.|+ +.+...+...++++|..+.+| .|...+..+....+|..+
T Consensus 300 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~g~-~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~al 377 (444)
T PRK09669 300 TIVAFVILSALIFFIPP-SNVWLIFALNILFNF-IQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAI 377 (444)
T ss_pred HHHHHHHHHHHHHHhCc-chHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHH
Confidence 87766554433333221 115666777888898 667777899999999886322 345678888888999999
Q ss_pred hHhhhHHh
Q 018388 160 GTLAARFL 167 (357)
Q Consensus 160 g~~~~~~l 167 (357)
|+.+++.+
T Consensus 378 g~~i~g~l 385 (444)
T PRK09669 378 GGAVVGWI 385 (444)
T ss_pred HHHHHHHH
Confidence 99888764
No 218
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.84 E-value=1.7e-07 Score=86.44 Aligned_cols=134 Identities=16% Similarity=0.149 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHHHhh----hhhhhhcCcchhhhHHHHHHHHHHHHHHHccch------hHHHHHHHHHHHhhhcccc
Q 018388 54 GFQQAIIGLGTLVMMPVI----GNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI------SFFYAYYALRTLTAMVCEG 123 (357)
Q Consensus 54 g~~~~~~~~~~~i~~~~~----G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~r~l~G~~~~~ 123 (357)
++..++..+...+..|+. +++.||+++++.+.++.++.+++........++ ...+++...+++.|+ ++.
T Consensus 319 ~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~-ge~ 397 (500)
T PRK09584 319 EQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSI-GEL 397 (500)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH-HHH
Confidence 666677776666776666 666666666677888899999888887666441 113578889999999 889
Q ss_pred hHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh--------------hhHHHHHHHHHHHHHHHHHHH
Q 018388 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--------------STTSAFQAATIVSMLAAAYMR 188 (357)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l--------------~~~~~f~~~~~~~~~~~~~~~ 188 (357)
...|...+++.+..|++.|++.+|.+.....+|..++..+.+.. +.++.|...++.+++..++.+
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~ 476 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLML 476 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888888887776665421 245677766666554443333
No 219
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.83 E-value=1.6e-06 Score=77.19 Aligned_cols=247 Identities=15% Similarity=0.087 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhC
Q 018388 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADN 136 (357)
Q Consensus 57 ~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~ 136 (357)
.++-.....++.++.+.+.|+.|+|..+.++..........+.+-++ +.++..-.+.|+ +.+..+...-.+++|.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~----y~~yfssallG~-Gaallw~GqG~ylt~~ 130 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNS----YYLYFSSALLGF-GAALLWTGQGGYLTSN 130 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcch----HHHHHHHHHhhh-hHHheecccceehhhc
Confidence 56667777888999999999999999999999999888877777665 567888899999 7788888888999999
Q ss_pred CCccchhHHHHHHHHHHHHHHHhhHhhhHHh------------hhH-HH----------HHHHHHHHHHHHHHHHHhccC
Q 018388 137 ISERQRASAFGILLGVLSASFVCGTLAARFL------------STT-SA----------FQAATIVSMLAAAYMRVFLKD 193 (357)
Q Consensus 137 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l------------~~~-~~----------f~~~~~~~~~~~~~~~~~~~e 193 (357)
.++|++.+..++.......+.++|..+-..+ +.+ .. ..+.+++..+..+...-...+
T Consensus 131 st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~ 210 (461)
T KOG3098|consen 131 STRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFL 210 (461)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeec
Confidence 9999999999999999888888886554332 111 11 111111111111111111111
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhh
Q 018388 194 DVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL 273 (357)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (357)
+.+..... .+ .. +....+.++...+.++ ++++..+....+..+..........|..+
T Consensus 211 p~~~~~~~-----------------~~----~~-~~~~~~~l~~~~~l~~-~~~ml~L~~~f~~tG~~~Sf~~~iypt~i 267 (461)
T KOG3098|consen 211 PSKDVVNC-----------------KS----SS-ETSFSELLKLTFKLLK-TPKMLLLFPFFFYTGLETSFWISIYPTCI 267 (461)
T ss_pred Cccchhhh-----------------hh----hc-cccHHHHHHHHHHHhc-CHhHHHHHHHHHHHHHHHHHHHhccchhh
Confidence 11110000 00 00 0122223444444444 77777666666666555555566666544
Q ss_pred hhh--cccCcc-hHHHHHHHHHHHHHHHHHHHHhhhhh---ccchhHHHHHHHHHHHHHHHHHHh
Q 018388 274 KAQ--FHFNKN-QFADLMLIAGLAGTISQLLFMPLLAP---ILGEAKLLSLGLFAACINMFICSI 332 (357)
Q Consensus 274 ~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~i~~~~~~~ 332 (357)
.-. .+.+.. ..+......+.+.++++ ...+.+.| ++|+++.+.++..+..+++++...
T Consensus 268 ~ft~~~~~n~~~~~ai~~~~~g~g~v~~g-~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l 331 (461)
T KOG3098|consen 268 SFTRKLGSNTTYLIAIYSIGIGLGEVIGG-LDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHL 331 (461)
T ss_pred hhhhhccCcchhHHHHHHHHHhHHHHHHH-HHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhc
Confidence 322 233322 24455555566666655 45555554 567888888888888888766554
No 220
>PRK11043 putative transporter; Provisional
Probab=98.80 E-value=6.3e-07 Score=80.58 Aligned_cols=130 Identities=12% Similarity=0.040 Sum_probs=88.8
Q ss_pred hHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHH---HH--c
Q 018388 27 VVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAIL---AY--R 101 (357)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~---~~--~ 101 (357)
.....|.+.++ .+.+..+.|+......++..++....+++.||+|+|+.+....+...++.... .. .
T Consensus 222 ~~~~~p~~~~~--------~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (401)
T PRK11043 222 WLTGSPFILEQ--------MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSH 293 (401)
T ss_pred HHHHhHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33455666543 24445566777777888889999999999999999987665554444433322 22 2
Q ss_pred cchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHhhh
Q 018388 102 RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLST 169 (357)
Q Consensus 102 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 169 (357)
++ .+..++...+.|+ +.+...+...+...|..| ++|+++.++.+.....+...++.+.+.+.+
T Consensus 294 ~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 294 PS---LVPLLIPFCVMAA-ANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred Cc---HHHHHHHHHHHHH-HHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 23 4444555566676 556666777777777765 689999999998877777788777776643
No 221
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.79 E-value=8.7e-08 Score=84.95 Aligned_cols=163 Identities=17% Similarity=0.203 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHH
Q 018388 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (357)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~ 91 (357)
.+++...+.+++.+.+...+-..++|. +......|........+-++.-++.+++..|+|+-+++.+++.+.
T Consensus 375 lff~~av~mG~g~~lv~tFLfWHled~--------~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~ 446 (618)
T KOG3762|consen 375 LFFFVAVVMGAGVGLVFTFLFWHLEDL--------GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACN 446 (618)
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHHhhc--------CCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHH
Confidence 345556666777777777777777653 222344577777777888888889999999999999999999999
Q ss_pred HHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHH-HHHHHHhhHhhhHHh---
Q 018388 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGV-LSASFVCGTLAARFL--- 167 (357)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~l--- 167 (357)
.+=.+..+...| .|..+...+++|+ ..+.++.+..+|+++..||+.|..+.++.+.. .++|--+|.++||.+
T Consensus 447 ~~Rf~~~S~L~n---~W~vLPieilqgi-t~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~ 522 (618)
T KOG3762|consen 447 VGRFLYYSYLQN---PWMVLPIEILQGI-THALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER 522 (618)
T ss_pred HHHHHHHHHhcC---chheeeHHHHHHH-HHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhee
Confidence 999999999999 8999999999999 88899999999999999999999999988554 477777777777775
Q ss_pred -hhHHHHHHHHHHHHHHHHH
Q 018388 168 -STTSAFQAATIVSMLAAAY 186 (357)
Q Consensus 168 -~~~~~f~~~~~~~~~~~~~ 186 (357)
+-|..|.+.++.+++.+++
T Consensus 523 fg~~ttf~~~giAcl~~l~~ 542 (618)
T KOG3762|consen 523 FGARTTFRIFGIACLVTLAL 542 (618)
T ss_pred ehhHHHHHHHHHHHHHHHHH
Confidence 6688888887776655444
No 222
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.76 E-value=1.2e-06 Score=74.37 Aligned_cols=168 Identities=17% Similarity=0.122 Sum_probs=124.5
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-CcchhhhHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPL 88 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-Grk~~l~~~~ 88 (357)
-+.+.+..-+..+..+....-+|.+..| .++|..+.|.+.+...+.+...++....+++|. ++|+..+...
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili~--------~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~ 281 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILID--------RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLAL 281 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHH--------cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 4555666666777778888889999874 467778889999999999999999999999975 5566777777
Q ss_pred HHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCc-cchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-RQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
....++...+.+.+....+++ -++.|+ +.|..+|.+..++.+..++ ++-++-.++.+....+=...||.+.|++
T Consensus 282 ~~~l~G~~G~~~~P~~~~~lw----~~llG~-G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~l 356 (395)
T COG2807 282 LLMLVGLVGLLLAPGQLPILW----ALLLGL-GQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFL 356 (395)
T ss_pred HHHHHHHHHHHHhhhhHHHHH----HHHHhC-ccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHH
Confidence 788888888878776322222 488899 6677779999999888764 4444555555655555567789999987
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHHh
Q 018388 168 -----STTSAFQAATIVSMLAAAYMRVF 190 (357)
Q Consensus 168 -----~~~~~f~~~~~~~~~~~~~~~~~ 190 (357)
+|+.+....+...+...+..+..
T Consensus 357 hDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 357 HDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred HHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 78888888777766665555443
No 223
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.75 E-value=1.8e-06 Score=78.24 Aligned_cols=188 Identities=11% Similarity=0.048 Sum_probs=135.9
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCcc----chhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCc-ch
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDE----CSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR-KA 82 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Gr-k~ 82 (357)
+.++.+++.+++..++..-+.....++..+....++++ ++...-.-.+....+.+...+.++..-++.+|+|+ |+
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~ 337 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKR 337 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 46788899999999999888877777777533322221 11111112355555666666788888999999995 77
Q ss_pred hhhHHHHHHHHHHHHHHHccch------------------hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCcc--ch
Q 018388 83 MLTLPLTLSIIPLAILAYRRSI------------------SFFYAYYALRTLTAMVCEGSINCLALAYVADNISER--QR 142 (357)
Q Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~--~r 142 (357)
....+.++.+++.....+.++. ...+..++.-.+.|+ ..+.....-++++++..+++ +.
T Consensus 338 ~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi-~~A~~~siPfal~s~~~~~~~~~~ 416 (477)
T TIGR01301 338 LWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGI-PLAITYSIPFALASIRSSNLGAGQ 416 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhH-HHHHHHHHhHHHHHHHccccCCCC
Confidence 7789988888777766644320 002556677788898 77777788999999999854 55
Q ss_pred hHHHHHHHHHHHHHHHhhHhhhHHh------hhHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 018388 143 ASAFGILLGVLSASFVCGTLAARFL------STTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (357)
Q Consensus 143 ~~~~~~~~~~~~~g~~~g~~~~~~l------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 196 (357)
|..+|+.+.+..+.+++..+..|.+ +-.+.+.+.++..++..+..++.+|++++
T Consensus 417 G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 417 GLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 8999999999999998888766663 23567888888888888888888887654
No 224
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.68 E-value=1.1e-07 Score=86.84 Aligned_cols=120 Identities=11% Similarity=0.041 Sum_probs=99.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHc----------cchhHHHHHHHH
Q 018388 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR----------RSISFFYAYYAL 113 (357)
Q Consensus 44 ~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 113 (357)
...+.++...|+......++.+++....+++.+|++.|+.+.++.++..++....... ++ .+.....
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~---~~~~~~~ 357 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISD---EVFVLGD 357 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCC---eeeeeeh
Confidence 3567788888999999999999999999999999999999999999888877554311 22 3344555
Q ss_pred HHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 114 RTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 114 r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
.++.++ +.+........++.+.+|+++++...++.....++|..+++.+++.+
T Consensus 358 ~~l~~~-~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 358 SIIAEV-LAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred hHHHHH-HHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677777 55666677899999999999999999999999999999999888875
No 225
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.67 E-value=8.2e-07 Score=80.31 Aligned_cols=171 Identities=15% Similarity=0.128 Sum_probs=120.6
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcc-----
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK----- 81 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk----- 81 (357)
.+.++.+++..+....+.......+|.|+++-+ +.+....|+..++..+...+...++|.++||.-+|
T Consensus 257 s~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL-------~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t 329 (466)
T KOG2532|consen 257 SPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVL-------GFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSET 329 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh-------CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchH
Confidence 356889999999999999999999999998733 33345569999999999999999999999988552
Q ss_pred ---h-hhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHH
Q 018388 82 ---A-MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASF 157 (357)
Q Consensus 82 ---~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 157 (357)
| .-.++....++..+..++.++......+...-+..++ . |...+....-..|. .+++-+..+++.+....+..
T Consensus 330 ~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~-~-g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~ 406 (466)
T KOG2532|consen 330 TVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGL-S-GFNISGFYKNHQDI-APQHAGFVMGIINFVGALAG 406 (466)
T ss_pred hHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHH-c-ccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHH
Confidence 2 2224555555666666666542222222223332333 2 23322233333333 45788899999999999999
Q ss_pred HhhHhhhHHh-------hhHHHHHHHHHHHHHHHHHH
Q 018388 158 VCGTLAARFL-------STTSAFQAATIVSMLAAAYM 187 (357)
Q Consensus 158 ~~g~~~~~~l-------~~~~~f~~~~~~~~~~~~~~ 187 (357)
+++|.+.+.+ .||+.|++.+++.++..+..
T Consensus 407 ~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f 443 (466)
T KOG2532|consen 407 FIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIF 443 (466)
T ss_pred HHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchhe
Confidence 9999988775 69999999998877665443
No 226
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.67 E-value=2.3e-07 Score=82.23 Aligned_cols=138 Identities=14% Similarity=0.044 Sum_probs=87.1
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
++...+..+.............|.+.++. ++.+..+.|+..+...+...++.++.|+++||+|||+.+..+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~ 299 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQ-------FGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFL 299 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHH
Confidence 34444444444444445556677787652 34445667888888899999999999999999999988887776
Q ss_pred HHHHHHHHHHHccchh-HHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHH
Q 018388 90 LSIIPLAILAYRRSIS-FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSAS 156 (357)
Q Consensus 90 ~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 156 (357)
....+..+..+..+.. ..+.....-.+.++ ..+...+...+++.|..| +++++..|+.+....+|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 300 GVAMGAFLVVLGLVSPLSLAVFIVLFVALFF-FSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHhcCCCcchHHHHHHHHHHHHH-Hhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 6666555554432110 13332233222232 222233456667777776 69999999988776654
No 227
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.67 E-value=1.5e-05 Score=69.96 Aligned_cols=134 Identities=12% Similarity=0.043 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHH
Q 018388 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132 (357)
Q Consensus 53 ~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~ 132 (357)
.|.+.-+..+...+..+.+.+..+|...+.=...+.++..++.++.+++++ .+.-+++-.+.++ +.|.-......+
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~---v~~~l~Gv~las~-ssg~GE~tfL~l 136 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPS---VWVRLLGVVLASL-SSGLGEVTFLSL 136 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccc---hhHHHHHHHHHhh-hhhhhHHHHHHH
Confidence 356667777788888888999999988766667777788889889899888 7777888888888 666665555555
Q ss_pred HhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH---h--hhHHHHHHHHHHHHHHHHHHHHhccCCC
Q 018388 133 VADNISERQRASAFGILLGVLSASFVCGTLAARF---L--STTSAFQAATIVSMLAAAYMRVFLKDDV 195 (357)
Q Consensus 133 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~---l--~~~~~f~~~~~~~~~~~~~~~~~~~e~~ 195 (357)
.. .+++ ...+-++.+.+.+.++|+..--. . +.|..+++...+.++..+..++.+|+++
T Consensus 137 t~-~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~ 199 (402)
T PF02487_consen 137 TH-FYGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPP 199 (402)
T ss_pred HH-hcCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 43 4543 34566666666666777643322 2 3477777777666555555555666543
No 228
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.62 E-value=3.1e-06 Score=76.24 Aligned_cols=149 Identities=8% Similarity=-0.007 Sum_probs=97.5
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
+.+....+..++...........++.+.++.. .+ .+....+...+.+.....++.+..|++.||+++|+.+.++
T Consensus 232 ~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~-~~-----~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~ 305 (410)
T TIGR00885 232 RHYREGVIAQFFYVGVQIMCWTFIIQYAVRLI-PG-----MTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAY 305 (410)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 34445555666655555455667777776421 01 1112223334444566678888899999999999999999
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
.++..+..++....++ ... ...-.+.|+ ..+..+|..++...+..+++.+....++.. . .+|..++|.+.|.+
T Consensus 306 ~~~~~~~~ll~~~~~~---~~~-~~~l~~~gl-f~s~~fp~i~sl~~~~~g~~~~~~s~~l~~-~-~~Gga~~p~l~G~~ 378 (410)
T TIGR00885 306 AIIGMALCLGSIFAGG---HVG-LYCLTLCSA-FMSLMFPTIYGIALKGLGQDTKYGAAGLVM-A-IIGGGIVPPLQGFI 378 (410)
T ss_pred HHHHHHHHHHHHHcCC---hHH-HHHHHHHHH-HHHHHHHHHHHHHHhhhhhhhhhhHHHHHH-H-HhccchHHHHHHHH
Confidence 8888888888888776 333 344555566 445566999999999988655433333333 3 38999999988887
Q ss_pred hh
Q 018388 168 ST 169 (357)
Q Consensus 168 ~~ 169 (357)
..
T Consensus 379 ~d 380 (410)
T TIGR00885 379 ID 380 (410)
T ss_pred HH
Confidence 44
No 229
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.62 E-value=4.9e-07 Score=80.40 Aligned_cols=152 Identities=14% Similarity=0.129 Sum_probs=113.1
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhh
Q 018388 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (357)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~ 85 (357)
++|++..+++..++...+..+.......|.+..+ +.+....++.......+.+++.+++.++++|+|+|+++.
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~l-------g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~ 306 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVL-------GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFL 306 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEc-------CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHH
Confidence 3456666777777777788888888787765422 233344566666777787888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccc-------hhHHHHHHHHHHHHHHH
Q 018388 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ-------RASAFGILLGVLSASFV 158 (357)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~-------r~~~~~~~~~~~~~g~~ 158 (357)
.+.++..++.++..+.+ .+..+..++..++.++ +.+...+...++++|..+.+| -|...+......=+|..
T Consensus 307 ~~~~~~~i~~~~~~f~~-~~~~~l~~~~~~i~~~-g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~a 384 (467)
T COG2211 307 IGLLLLAVGYLLLYFTP-AGSVVLIVVALIIAGV-GTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLA 384 (467)
T ss_pred HHHHHHHHHHHHHHhhc-CcchHHHHHHHHHHHH-HhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHH
Confidence 99999999999998887 2226778888889888 667777889999998876322 24455666666677777
Q ss_pred hhHhhhHH
Q 018388 159 CGTLAARF 166 (357)
Q Consensus 159 ~g~~~~~~ 166 (357)
++..+.++
T Consensus 385 la~~~~g~ 392 (467)
T COG2211 385 LAGFIPGW 392 (467)
T ss_pred HHHHHHHH
Confidence 77655554
No 230
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.59 E-value=3.8e-07 Score=77.30 Aligned_cols=126 Identities=17% Similarity=0.201 Sum_probs=94.7
Q ss_pred HHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHH-HHHHHHHHHhhhcccchHHHHHHHHHhhCCCc
Q 018388 61 GLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFF-YAYYALRTLTAMVCEGSINCLALAYVADNISE 139 (357)
Q Consensus 61 ~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~ 139 (357)
.+.-.-|.++.+++.||+|||+.+..+.+++++..+....+.+...+ .+++.+|++... ++ .+.+.|..|++|.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg----~f-qvaYvYtPEVyPT 465 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISG----AF-QVAYVYTPEVYPT 465 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhc----hh-eEEEEecCcccch
Confidence 44456677899999999999999999999999998887776543222 455667766443 33 4788899999999
Q ss_pred cchhHHHHHHHHHHHHHHHhhHhhhHHh--hhHHHHHHHHHHHHHHHHHHHHhcc
Q 018388 140 RQRASAFGILLGVLSASFVCGTLAARFL--STTSAFQAATIVSMLAAAYMRVFLK 192 (357)
Q Consensus 140 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l--~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (357)
+-|+.+.|..+.+.-+|.++.|.++-.. .-..+..+.+.+.++..++..+ +|
T Consensus 466 avRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcf-fP 519 (528)
T KOG0253|consen 466 AVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCF-FP 519 (528)
T ss_pred hhhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHhee-ee
Confidence 9999999999999999999999998333 2234555555665666555544 45
No 231
>PRK11462 putative transporter; Provisional
Probab=98.58 E-value=1.9e-06 Score=78.78 Aligned_cols=150 Identities=11% Similarity=0.035 Sum_probs=90.0
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
+|.+..+....++..............+.+... +.+ ...+.+.+.+.++.+++.+++++++||+|+|+.+..
T Consensus 227 Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~--g~~------~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~ 298 (460)
T PRK11462 227 NDQWRIVGLLTIFNILAVCVRGGAMMYYVTWIL--GTP------EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWW 298 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhc--CCh------HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 344555555555666665555555555554422 111 122456677788889999999999999999998775
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCcc-----ch--hHHHHHHHHHHHHHHHh
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER-----QR--ASAFGILLGVLSASFVC 159 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~-----~r--~~~~~~~~~~~~~g~~~ 159 (357)
+.....+...+..+.++.. ...+++.-++.|+ +.+...+...++++|..+.+ +| +...+......-+|..+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~g~-~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~al 376 (460)
T PRK11462 299 TNALLAVISLAMFFVPMQA-SITMFVFIFVIGV-LHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAF 376 (460)
T ss_pred HHHHHHHHHHHHHHhchhH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHH
Confidence 5554444333333333311 2233444456677 44555566677888877622 23 34456666777788888
Q ss_pred hHhhhHH
Q 018388 160 GTLAARF 166 (357)
Q Consensus 160 g~~~~~~ 166 (357)
|+.+++.
T Consensus 377 g~~i~g~ 383 (460)
T PRK11462 377 GGALIGW 383 (460)
T ss_pred HHHHHHH
Confidence 8777665
No 232
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.53 E-value=9.9e-06 Score=73.12 Aligned_cols=163 Identities=12% Similarity=0.047 Sum_probs=95.5
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~ 88 (357)
.++...+..++............|.+.++ ..+.+..+.|+.......+..+++...+++.+|.++++......
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~-------~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 291 (413)
T PRK15403 219 LFLTGAATLSLSYIPMMSWVAVSPVILID-------AGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAV 291 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHH
Confidence 34444444444444444555567888765 23455566788777778888888888888775555544433222
Q ss_pred HHHHHHHHHHHH----ccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhh
Q 018388 89 TLSIIPLAILAY----RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (357)
Q Consensus 89 ~~~~~~~~~~~~----~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 164 (357)
.+..++..+... .++ .++..++..++.++ +.+...|...+.. ....+..+|++.+..+.....+...++..+
T Consensus 292 ~~~~ig~~l~~~~~~~~~~--~~~~~~~~~~l~~~-G~~~~~p~~~~~a-l~~~~~~~G~a~a~~~~~~~~~~~~~~~~~ 367 (413)
T PRK15403 292 PIQLVGLALLIVGNLLWPH--VWLWSVLGTSLYAF-GIGLIFPTLFRFT-LFSNNLPKGTVSASLNMVILMVMAVSVEIG 367 (413)
T ss_pred HHHHHHHHHHHHHHHHccc--cHHHHHHHHHHHHH-HHHHHhHHHHHHH-hccCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 222233222221 222 13334567777777 5566656555432 222234578999998888888888888888
Q ss_pred HHh---hhHHHHHHHHHHHHH
Q 018388 165 RFL---STTSAFQAATIVSML 182 (357)
Q Consensus 165 ~~l---~~~~~f~~~~~~~~~ 182 (357)
+++ +-+++|...+++..+
T Consensus 368 g~~~~~~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 368 RWLWFNGGRLPFHLLAVVAGV 388 (413)
T ss_pred HHHHHcCCchHHHHHHHHHHH
Confidence 876 335666655555443
No 233
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.50 E-value=1.3e-06 Score=79.44 Aligned_cols=109 Identities=15% Similarity=0.148 Sum_probs=85.3
Q ss_pred ccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhcc-chhHHHHHHHHHH
Q 018388 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-GEAKLLSLGLFAA 323 (357)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~ 323 (357)
++.++..+...+...+.+++...++|.|+++.+|+++.+.+.+.........++. +++|++.||+ |||+.+..+.++.
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~-ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTP-ILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCcHHHHHHHHHHH
Confidence 5567777778888888999999999999998889999999999888888888877 8999999999 9999999999999
Q ss_pred HHHHHHHHhcCc-chHHHH-HHHHHHhhhcccc
Q 018388 324 CINMFICSISWS-AWVPYA-TTAFSVLVVFATP 354 (357)
Q Consensus 324 ~i~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~p 354 (357)
.++.+++....+ ....+. ..+..+|.|...|
T Consensus 87 ~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~ 119 (493)
T PRK15462 87 AIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKS 119 (493)
T ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHhcccccc
Confidence 998776665332 222232 2344455555544
No 234
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.49 E-value=1.1e-06 Score=58.13 Aligned_cols=71 Identities=21% Similarity=0.234 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHH
Q 018388 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (357)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~ 90 (357)
.+-...++...+.+...|.+|.+.+ +.+.+..++|.+.++..+...++.|++|.++||+++++..+.....
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~--------~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLK--------QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhh--------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3445567777788888999999976 4577788999999999999999999999999999998887765543
No 235
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.49 E-value=0.00023 Score=64.73 Aligned_cols=236 Identities=12% Similarity=0.120 Sum_probs=142.7
Q ss_pred HHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHc--c-------ch-------------h------HHHHHHHHHH
Q 018388 64 TLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR--R-------SI-------------S------FFYAYYALRT 115 (357)
Q Consensus 64 ~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~--~-------~~-------------~------~~~~~~~~r~ 115 (357)
..+......+++||++|.+++-.....+.....++++. | +. . ..|...+..+
T Consensus 72 a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv 151 (491)
T PF03219_consen 72 AILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYV 151 (491)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Confidence 34556779999999999998887776666665555542 1 10 0 0133334444
Q ss_pred HhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHhh-------------hHHHHH-HHHHH--
Q 018388 116 LTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLS-------------TTSAFQ-AATIV-- 179 (357)
Q Consensus 116 l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-------------~~~~f~-~~~~~-- 179 (357)
..-+.+.-...-.-..+..|.++.||-.|..++...+.++|.++++.+..++. |..... ...++
T Consensus 152 ~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~ 231 (491)
T PF03219_consen 152 MAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLI 231 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHH
Confidence 44442212222245788999999999999999999999999998877665542 221111 11111
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHH
Q 018388 180 SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 259 (357)
Q Consensus 180 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (357)
+.+........+.+....++.. .+...+++.++.+...++..+.+.++|.+..+.+....++
T Consensus 232 ~g~~i~~~~~~~~~~vl~~~~~------------------~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Yg 293 (491)
T PF03219_consen 232 LGIVIILLYRYMNKNVLTDPRF------------------YPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYG 293 (491)
T ss_pred HHHHHHHHHHHHHHHccCcccc------------------chhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 1111122222333221111110 0011112223344467777888888999999999888888
Q ss_pred HhhhhhhHHHHHhhhhhcccCcch----HHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Q 018388 260 LSEGGMQASFLYFLKAQFHFNKNQ----FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (357)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (357)
.....+....-..+++.+. ++.+ .|......++...+.. ++++.+.+|+|-+....+.
T Consensus 294 i~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~~tGivtii~~-~l~~~iir~~GW~~~Alit 355 (491)
T PF03219_consen 294 ISINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSSWTGIVTIIMM-FLSSNIIRRFGWRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHh
Confidence 8888887776666666543 3333 3555666777777777 7889999999987765554
No 236
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.46 E-value=1e-05 Score=61.43 Aligned_cols=102 Identities=17% Similarity=0.188 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCC
Q 018388 58 AIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNI 137 (357)
Q Consensus 58 ~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~ 137 (357)
++......+.+++.+.+.++.|.|+.++++.+...+-.... +-++ .+.++.+-.+.|+ +.+..++..-.++.+..
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~---~~~l~~~s~l~G~-~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPN---SYTLYPASALLGF-GAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhhh---HHHHHHHHHHHhh-hhHHhhHhhhHHHHHcC
Confidence 34455567777888899999999999999999887655444 3445 6788899999999 88999999999999999
Q ss_pred CccchhHHHHHHHHHHHHHHHhhHhhh
Q 018388 138 SERQRASAFGILLGVLSASFVCGTLAA 164 (357)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~~~ 164 (357)
++++|++..++.......+.++|.++.
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998888888888887654
No 237
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.44 E-value=3.2e-05 Score=67.28 Aligned_cols=165 Identities=19% Similarity=0.173 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh-hcCcchhhhHHHHHH
Q 018388 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-QYGRKAMLTLPLTLS 91 (357)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~d-r~Grk~~l~~~~~~~ 91 (357)
.....++..++.++.-+++-+|- .+-++.+..++.-+.+....+.+++-...|++.. |.++|+.-.+++...
T Consensus 213 f~~fl~l~t~a~~~QD~iLEPyg-------g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~ 285 (403)
T PF03209_consen 213 FFVFLFLGTLAFFMQDVILEPYG-------GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLG 285 (403)
T ss_pred HHHHHHHHHHHHHhhHHHcCCch-------hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHH
Confidence 34444455555555545555553 3456777778888889999999999999998888 677788777888877
Q ss_pred HHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----
Q 018388 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL---- 167 (357)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l---- 167 (357)
.++..+..++......+.+...-++.|+ +.|.+.....+...|..++++.|..+|.+.....++..+|..+++.+
T Consensus 286 ~~~f~lii~a~~~~~~~~~~~~~~l~G~-g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 286 ALAFALIILAGPLGSPWLFRPGVFLLGL-GNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHH-hhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776665554322227888899999999 77888888999999999999999999999999999988888887763
Q ss_pred ----------hhHHHHHHHHHHHHHHHH
Q 018388 168 ----------STTSAFQAATIVSMLAAA 185 (357)
Q Consensus 168 ----------~~~~~f~~~~~~~~~~~~ 185 (357)
+|..+|.+.++..++...
T Consensus 365 ~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 365 RALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 345667777666444433
No 238
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.39 E-value=2.7e-06 Score=56.63 Aligned_cols=76 Identities=20% Similarity=0.277 Sum_probs=68.1
Q ss_pred HHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHH
Q 018388 20 WGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA 99 (357)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~ 99 (357)
.+++...+.|.+|.+.+ |.+++..+.|++.+...+|+.++++...++.++..+++.+..+.+...+....++
T Consensus 4 mGigRFayTplLP~M~~--------~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma 75 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQA--------DGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMA 75 (85)
T ss_pred hhhHHHHHHhHhHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 35677888999999986 4466778889999999999999999999999998889999999999999999999
Q ss_pred Hccc
Q 018388 100 YRRS 103 (357)
Q Consensus 100 ~~~~ 103 (357)
+.++
T Consensus 76 ~~~~ 79 (85)
T PF06779_consen 76 LTHS 79 (85)
T ss_pred HHhc
Confidence 9988
No 239
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.36 E-value=9.8e-07 Score=75.64 Aligned_cols=167 Identities=11% Similarity=0.094 Sum_probs=115.1
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhh--HH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT--LP 87 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~--~~ 87 (357)
+.......-....+..+.-|.++....|..+.. . ++.|+..--..+.+.++..+.|.++||+++-+.+. .+
T Consensus 272 I~~~agai~~~n~~lafLePtlslwm~e~m~~p--~-----w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~g 344 (464)
T KOG3764|consen 272 ILLIAGAITFSNSSLAFLEPTLSLWMLETMFTP--G-----WEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGG 344 (464)
T ss_pred HhhhhcchhhccchHHHhCcccHHHHHHhccCC--C-----cceeeeecccccchhccCchHHHHHHhcCchhHHHHHHH
Confidence 344444555566777788899999887744311 2 23455556668899999999999999999544333 45
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCC---cc---chhHHHHHHHHHHHHHHHhhH
Q 018388 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNIS---ER---QRASAFGILLGVLSASFVCGT 161 (357)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~g~~~g~ 161 (357)
++...+.+....++++ +..+.+-++..++ +.+...+.........++ .+ -.|...++...++++|..+||
T Consensus 345 l~~~G~~~~~iP~~~~---~~~L~vp~~~l~~-~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP 420 (464)
T KOG3764|consen 345 LATVGVSSGPIPFATS---IAQLWVPNFGLGF-GIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGP 420 (464)
T ss_pred HHHHHHHhchhHhhhh---HHHHhhhhHHHHH-HHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccc
Confidence 5555566666667788 7777777777777 545554444444444443 23 457889999999999999999
Q ss_pred hhhHHh----hhHHHHHHHHHHHHHHHHHH
Q 018388 162 LAARFL----STTSAFQAATIVSMLAAAYM 187 (357)
Q Consensus 162 ~~~~~l----~~~~~f~~~~~~~~~~~~~~ 187 (357)
.++|.+ |.+|.-.+.++..++...+.
T Consensus 421 ~~gg~iv~~iGF~wl~~iig~~n~iyapvl 450 (464)
T KOG3764|consen 421 TFGGSLVEAIGFEWLMTIIGILNLIYAPVL 450 (464)
T ss_pred cccchheeehhHHHHHHHHHHHHHHHHHHH
Confidence 999986 77887777777766655443
No 240
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.31 E-value=1.2e-05 Score=65.38 Aligned_cols=80 Identities=15% Similarity=0.129 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHH
Q 018388 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132 (357)
Q Consensus 53 ~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~ 132 (357)
+|.+.....-..+++..+.|.++|+-|||+.-+.-++.+.+++ +.-.+++ +-.++++|.+-|+ +.+....+..++
T Consensus 74 IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpq---YkVLmVGR~LGGi-aTsLLFSaFEsW 148 (454)
T KOG4332|consen 74 IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQ---YKVLMVGRVLGGI-ATSLLFSAFESW 148 (454)
T ss_pred cceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCc---eEEEeehhhhhhH-HHHHHHHHHHHH
Confidence 3444444555667888899999999999997555444443333 2223455 7788999999999 666666666555
Q ss_pred -HhhCC
Q 018388 133 -VADNI 137 (357)
Q Consensus 133 -i~~~~ 137 (357)
++|..
T Consensus 149 liaEHn 154 (454)
T KOG4332|consen 149 LIAEHN 154 (454)
T ss_pred HHHHhh
Confidence 45655
No 241
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.27 E-value=5.2e-05 Score=64.01 Aligned_cols=267 Identities=15% Similarity=0.059 Sum_probs=156.3
Q ss_pred HHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccch
Q 018388 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQR 142 (357)
Q Consensus 63 ~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r 142 (357)
.+.+.-.+.=.+.|..-.|++++.-.+.......+..+.++ .+.+-+.-+..|. ..+.. .+.++++-+.++++++
T Consensus 54 SYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~s---V~~mQvlE~FyG~-~tAaE-IAYysYIYs~Vd~~~Y 128 (433)
T KOG3810|consen 54 SYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPS---VKAMQVLEFFYGP-ATAAE-IAYYSYIYSKVDPEMY 128 (433)
T ss_pred HHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCC---chheeeehhhcCh-HHHHH-HhhhheeeeecCHHHH
Confidence 34555566667889998999999887777777888888888 7877888888898 54444 6889999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhHhhhHHh---hh---HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccc
Q 018388 143 ASAFGILLGVLSASFVCGTLAARFL---ST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVN 216 (357)
Q Consensus 143 ~~~~~~~~~~~~~g~~~g~~~~~~l---~~---~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 216 (357)
.++.+...++.-.|...|..++..+ +| ...=.+.... ........+++|..++..-.+.+.++.. ..+.
T Consensus 129 qrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~-~~ia~~~A~fLP~v~rSl~f~~~~~~~~--v~~~-- 203 (433)
T KOG3810|consen 129 KRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAE-VTIAVLLALFLPRVKRSLYFHRLEDKIS--VGDL-- 203 (433)
T ss_pred HHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHH-HHHHHHHHhhCCCCchhhhhhcccccce--eccc--
Confidence 9999999999999988888888775 22 2222222222 2222333455776653221110000000 0000
Q ss_pred cCCCCCCCCccccccchhHHH---HHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhc-ccCcchHHHHHHHHH
Q 018388 217 QNESNSPVKIPVCKKIPSIRD---LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF-HFNKNQFADLMLIAG 292 (357)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~ 292 (357)
++..++.+.....+..+.. -+....+||++....+=..+...++.-+.++....-++.. +-.....|..-++..
T Consensus 204 --e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~t 281 (433)
T KOG3810|consen 204 --EEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVST 281 (433)
T ss_pred --hhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHH
Confidence 0000000000000011111 1222345777666665556666666666665555555441 111222466667777
Q ss_pred HHHHHHHHHHHhhhhhccchh--HHHHHHHHHHHHHHHHHHhcCcchHHHHH
Q 018388 293 LAGTISQLLFMPLLAPILGEA--KLLSLGLFAACINMFICSISWSAWVPYAT 342 (357)
Q Consensus 293 ~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 342 (357)
..++++. +..|++.-++.|. .++..+....+...+.+..+.+.|..++.
T Consensus 282 lLGa~~~-~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~ 332 (433)
T KOG3810|consen 282 LLGAIAA-LAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAG 332 (433)
T ss_pred HHHHHHH-HHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhh
Confidence 7777777 7778876555543 34455555555556666667777776663
No 242
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.26 E-value=8.5e-06 Score=53.86 Aligned_cols=71 Identities=21% Similarity=0.229 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHH
Q 018388 250 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (357)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (357)
..-...++.....+....++|.|.++. |+|+.++|.+.++......++. .+.|.+.||.++++.+......
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~~-Gl~~~~iGil~~i~~~~~~~~~-pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQL-GLSPSQIGILSAIRPLIRFLAP-PLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhhc-CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCccHHHHHHHHH
Confidence 344567777788889999999999986 9999999999999999999988 7889999999998876655443
No 243
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.26 E-value=5.9e-05 Score=69.88 Aligned_cols=149 Identities=17% Similarity=0.121 Sum_probs=98.1
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCc-chhhh
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR-KAMLT 85 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Gr-k~~l~ 85 (357)
+|.+...++..++....+.......|.......+.+.. +. ...++....+.++..++..+.|.+..+++| |..++
T Consensus 309 ~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~--~~--~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li 384 (599)
T PF06609_consen 309 RRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPI--SI--TEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLI 384 (599)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCc--cc--ceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHH
Confidence 35566666677776666655556667665542211111 11 124677777788888999999999999888 55556
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhH
Q 018388 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (357)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (357)
++.++..++..+++..+..+ ....+..-++.|+ +.|...........-.+|+++-+.+.++....-.+|..+|.
T Consensus 385 ~~~~~~ta~~Gama~~~~~n-~~~~i~~~~l~g~-giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~ 458 (599)
T PF06609_consen 385 FGSVLMTAFCGAMAAVRPDN-KNAAIAFLVLAGF-GIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGY 458 (599)
T ss_pred HHHHHHHHHHHHHHHccCCC-cchHHHHHHHHHH-hHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHH
Confidence 77766666555554432111 3334566778888 55666556666667778999999999999888888877764
No 244
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.21 E-value=2.1e-06 Score=75.07 Aligned_cols=130 Identities=14% Similarity=0.132 Sum_probs=92.5
Q ss_pred HHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccc-hh----HHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCcc
Q 018388 66 VMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRS-IS----FFYAYYALRTLTAMVCEGSINCLALAYVADNISER 140 (357)
Q Consensus 66 i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~ 140 (357)
.+-.+...++|+.|||+..+.+.++..+..+..+...| .. ......+..++.-+ + .- .....+-+|.+|.+
T Consensus 363 PGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NF-G--Pn-~ttfivpaE~FPar 438 (538)
T KOG0252|consen 363 PGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNF-G--PN-ATTFIVPAEIFPAR 438 (538)
T ss_pred CceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhc-C--CC-ceeEEeehhhchHH
Confidence 35667788999999999999999999998888887765 11 11222233333333 2 21 34556678999999
Q ss_pred chhHHHHHHHHHHHHHHHhhHhhhHHh---------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 018388 141 QRASAFGILLGVLSASFVCGTLAARFL---------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD 200 (357)
Q Consensus 141 ~r~~~~~~~~~~~~~g~~~g~~~~~~l---------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~ 200 (357)
-|+..-|+..+..-.|.++|...-.++ +.++.+++.+.+..+..+ ..+++||++.+..+
T Consensus 439 vR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~-~T~l~pEtk~~~le 506 (538)
T KOG0252|consen 439 VRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGIL-FTLLIPETKGKSLE 506 (538)
T ss_pred HhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHh-eeEEeecccccCHH
Confidence 999999999999999988887554443 568899999888665544 44568888765443
No 245
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.15 E-value=5.3e-05 Score=70.47 Aligned_cols=181 Identities=15% Similarity=0.095 Sum_probs=107.5
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
+.+....+..|....+........+.+.+..- .+.-. .....+..+...++..+...+.||+|||+.++.+
T Consensus 295 ~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g---~~~~~------~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s 365 (513)
T KOG0254|consen 295 RLIIGLLLQLFQQLTGINYVFYYSTTIFKSAG---LKSDT------FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFG 365 (513)
T ss_pred HHHHHHHHHHHHHHhCCceEEeehHHHHHhcC---CCCch------HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHh
Confidence 33444555555555666666667777766521 11110 2222333555566667779999999999999999
Q ss_pred HHHHHHHHHHHHHccch-----------hHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHH
Q 018388 88 LTLSIIPLAILAYRRSI-----------SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSAS 156 (357)
Q Consensus 88 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 156 (357)
.....++.++.+..... ........+-++..+ ..+.. +....+.+|.+|.+-|+++.++......+.
T Consensus 366 ~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f-~~g~g-~v~w~~~sEifp~~~r~~~~s~~~~~n~~~ 443 (513)
T KOG0254|consen 366 AAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSF-AIGWG-PVPWVIVSEIFPLRLRSKGASLAVAVNWLW 443 (513)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHH-hcccc-cchhhhhhccCcHhHHhhhHHHHHHHHHHH
Confidence 99999888877754211 111222222223333 32322 555678899999999999988876666555
Q ss_pred HHhhHhhh----HHhhhHHHHHHHHHHHHHHHH-HHHHhccCCCCCCC
Q 018388 157 FVCGTLAA----RFLSTTSAFQAATIVSMLAAA-YMRVFLKDDVPNDD 199 (357)
Q Consensus 157 ~~~g~~~~----~~l~~~~~f~~~~~~~~~~~~-~~~~~~~e~~~~~~ 199 (357)
..+-...- ...++...|...+..+.+... ..++++||++....
T Consensus 444 ~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sl 491 (513)
T KOG0254|consen 444 NFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTL 491 (513)
T ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcH
Confidence 43322111 111224566666666566555 56778899876543
No 246
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.13 E-value=0.00017 Score=64.15 Aligned_cols=283 Identities=12% Similarity=0.052 Sum_probs=136.7
Q ss_pred hHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----hcCcchhhh
Q 018388 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-----QYGRKAMLT 85 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~d-----r~Grk~~l~ 85 (357)
..+.+..++.++-.++....+|.++++. .-+.|..+.|.. +.....+ =.-++|.++.| |+||||..+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~------~~~~sy~q~~~f-Sla~~Pf-SlKlLWaPiVDs~y~~~~GRRKSWi 74 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSM------AKKVSYSQQAIF-SLASYPF-SLKLLWAPIVDSVYSKRIGRRKSWI 74 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccc------cCCCChhHheee-eeeechh-HHHHhhhhhhhhhcccccCCcchhh
Confidence 4556666777777777666778887651 112222333321 1111111 12346677766 789999888
Q ss_pred HHH-HHHHHHHHHHHHcc----------c---------hhHH--HHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchh
Q 018388 86 LPL-TLSIIPLAILAYRR----------S---------ISFF--YAYYALRTLTAMVCEGSINCLALAYVADNISERQRA 143 (357)
Q Consensus 86 ~~~-~~~~~~~~~~~~~~----------~---------~~~~--~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~ 143 (357)
+-. .+.++..+..+... + .+.. ..+....++.=+ .++....+...+.-...++|+++
T Consensus 75 iP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~f-l~ATQDIAVDGWALT~Ls~~n~~ 153 (544)
T PF13000_consen 75 IPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVF-LCATQDIAVDGWALTMLSPENVG 153 (544)
T ss_pred hHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHH-HHccCCceeehhhhhhcChhhcc
Confidence 654 23333333322211 0 0000 011122212222 22344455666666667788888
Q ss_pred HHHHHHHHHHHHHHHhhHhhhHHhh-------h-H------------HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 018388 144 SAFGILLGVLSASFVCGTLAARFLS-------T-T------------SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDL 203 (357)
Q Consensus 144 ~~~~~~~~~~~~g~~~g~~~~~~l~-------~-~------------~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 203 (357)
.+......+.+.|..++-.+--.++ | | .-..+.+.+.++.-++..++-+|.+..+... +
T Consensus 154 ~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~-~ 232 (544)
T PF13000_consen 154 YASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLP-K 232 (544)
T ss_pred hHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCc-c
Confidence 8777777777777666533221110 0 0 0111222232333344445455544322211 1
Q ss_pred CcccccccccccccCCCCCCCCc-ccccc----chhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcc
Q 018388 204 TRPIITEETEGVNQNESNSPVKI-PVCKK----IPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFH 278 (357)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 278 (357)
.+..... +++.++...+.+..+ ...++ .+..+..++.+ |-|.+..+.+..+..-.++.........=+.|. |
T Consensus 233 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~il-kLp~V~~li~ilL~~KigF~a~da~T~LKLlEk-G 309 (544)
T PF13000_consen 233 IEPINKS-DGKSKEISIEYDESDVISTEEILSIKDVYKSLWKIL-KLPNVQTLIIILLTAKIGFQANDAVTSLKLLEK-G 309 (544)
T ss_pred ccccccc-cccccccceecccccccchhhhhhHHHHHHHHHHHH-cCchHHHHHHHHHHHHhccccchhhhHHHHHHc-C
Confidence 0000000 000000000000000 01111 12233333333 478888888888888888888888888888887 9
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHhhhh
Q 018388 279 FNKNQFADLMLIAGLAGTISQLLFMPLLA 307 (357)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 307 (357)
++.++.+.+..+..-..++.. ...++..
T Consensus 310 ~~KE~LAl~~li~~P~qii~~-~~~~Kws 337 (544)
T PF13000_consen 310 LSKEDLALLVLIDFPFQIILP-YYIGKWS 337 (544)
T ss_pred CCHHHhHHHHHHhhhHHHHHH-HHhhhhh
Confidence 999998877766655556655 4444443
No 247
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.08 E-value=0.00022 Score=61.82 Aligned_cols=150 Identities=13% Similarity=0.053 Sum_probs=113.4
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~ 86 (357)
++++..-.+..|+..-........++.|.++. .+.+..+.+...+.+..+.++|.....++..|+...|.+.+
T Consensus 235 ~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~-------~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf 307 (422)
T COG0738 235 NKHLRLGVLAIFLYVGAEVAIGSFLVSYLEEL-------LGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAF 307 (422)
T ss_pred ChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 45666777788888777888888999998763 34445566788888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
..++..+.++..++.++ .+.++ +-++.|+ ..+..+|...+...+..| ++ ...-|..-.+..+|..+-|.+.|+
T Consensus 308 ~a~~~ill~~~~~l~~g---~v~~~-~l~~ig~-F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~ 380 (422)
T COG0738 308 YALIAILLLLAVALIGG---VVALY-ALFLIGL-FNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGV 380 (422)
T ss_pred HHHHHHHHHHHHHHhcC---hHHHH-HHHHHHH-HhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHH
Confidence 99888888888888888 44333 3344566 445667999999999998 33 344444555567788888888888
Q ss_pred hhhH
Q 018388 167 LSTT 170 (357)
Q Consensus 167 l~~~ 170 (357)
+..+
T Consensus 381 i~d~ 384 (422)
T COG0738 381 IADM 384 (422)
T ss_pred HHHh
Confidence 7443
No 248
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.07 E-value=0.00045 Score=59.32 Aligned_cols=261 Identities=12% Similarity=0.034 Sum_probs=143.2
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----hcCcc
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-----QYGRK 81 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~d-----r~Grk 81 (357)
++++..+.+...+.++-.+... .+|.+++.. +.|....+....+ . --.-.-+.|.++.| |+|||
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak--------~vSyt~~a~fS~a-y-~P~sLKllWaPiVDs~y~k~~Grr 98 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAK--------GVSYTSQAIFSFA-Y-WPFSLKLLWAPIVDSVYSKRFGRR 98 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCC--------Ccchhhhhhhhhh-h-hHHHHHHHHHhhhHHHHHHhhccc
Confidence 5667788888888888888888 889888631 1222222221111 1 11234568999999 99999
Q ss_pred hhhhHHH-HHHHHHHHHHHHccch------h--HHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHH
Q 018388 82 AMLTLPL-TLSIIPLAILAYRRSI------S--FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGV 152 (357)
Q Consensus 82 ~~l~~~~-~~~~~~~~~~~~~~~~------~--~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 152 (357)
|..++-+ .+.+......+.-.+. . ....+....++.-+ .++....+...+.-...++|+.|-+......+
T Consensus 99 ksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnf-laAtQDIAVDgwALtmLs~e~lgyaST~q~Vg 177 (510)
T KOG3574|consen 99 KSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNF-LAATQDIAVDGWALTMLSRENLGYASTCQSVG 177 (510)
T ss_pred cceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHH-HHhhhhhhhhHHHHHhcCHhhcCchhHHHHHH
Confidence 9877533 3333333333332110 0 01222223344444 44666677888888888888888888777777
Q ss_pred HHHHHHhhHhhhHH----------h-hh---------HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccc
Q 018388 153 LSASFVCGTLAARF----------L-ST---------TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEET 212 (357)
Q Consensus 153 ~~~g~~~g~~~~~~----------l-~~---------~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 212 (357)
...|..+|..+--. + +| ..-.++.+.+..+.-.+..+.-+|.+....++
T Consensus 178 ~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e----------- 246 (510)
T KOG3574|consen 178 QTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEE----------- 246 (510)
T ss_pred HhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhh-----------
Confidence 77777766432110 0 11 11122333333333333333333322221110
Q ss_pred cccccCCCCCCCCccccccchhHHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHH
Q 018388 213 EGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAG 292 (357)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 292 (357)
.+.+..+..+- ++...+-|.+..........-.++.+.....+.-+.|. |.+.++.+.......
T Consensus 247 --------------~~~~i~~~yk~-l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~-Gv~ke~Lal~~v~~~ 310 (510)
T KOG3574|consen 247 --------------LELGIHESYKL-LRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEH-GVPKEELALIAVPLV 310 (510)
T ss_pred --------------hhcCHHHHHHH-HHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHc-CCChhHheeeeeehh
Confidence 01111112222 22233467777777777777888888888888888886 999988777664444
Q ss_pred HHHHHHHHHHHhhhh
Q 018388 293 LAGTISQLLFMPLLA 307 (357)
Q Consensus 293 ~~~~~~~~~~~~~l~ 307 (357)
-..++.. ...|+..
T Consensus 311 plqI~l~-~~~gk~t 324 (510)
T KOG3574|consen 311 PLQIALP-LYIGKWT 324 (510)
T ss_pred hHHHhhh-hhheeec
Confidence 4444444 3334433
No 249
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.03 E-value=6.9e-05 Score=66.68 Aligned_cols=113 Identities=20% Similarity=0.221 Sum_probs=93.4
Q ss_pred hhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcc----cCcchHHHHHHHHHHHHHHHHHHHHhhhhhc-cchhHHH
Q 018388 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFH----FNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLL 316 (357)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~ 316 (357)
+.++|.++.++..-+.--+++++....+..|+...++ +|.+++.-+++.++...-... +++||+.|| .|+|+++
T Consensus 17 f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~-i~GG~laDr~LG~~~tI 95 (498)
T COG3104 17 FGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTP-IIGGWLADRVLGTRRTI 95 (498)
T ss_pred CCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHH-HHHHHHHHHhcchhHHH
Confidence 3447788889999999999999999999999988888 999888888888887777766 899999998 5999999
Q ss_pred HHHHHHHHHHHHHHHhcC--cchHHHH-HHHHHHhhhccccc
Q 018388 317 SLGLFAACINMFICSISW--SAWVPYA-TTAFSVLVVFATPS 355 (357)
Q Consensus 317 ~~~~~~~~i~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~p~ 355 (357)
..|.++..++.++++... ....+++ ..++.+|.|..=|.
T Consensus 96 ~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~N 137 (498)
T COG3104 96 VLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPN 137 (498)
T ss_pred HHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccccc
Confidence 999999999999998874 4445555 45667888876554
No 250
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.95 E-value=1.7e-05 Score=70.91 Aligned_cols=104 Identities=16% Similarity=0.155 Sum_probs=78.6
Q ss_pred HHHHHHhhhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhH
Q 018388 235 IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (357)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (357)
+.+..+. +.++....+++..++.......+.+++--+++|. +-.+...|......-.+.+..- ++.+++.+|+|+-+
T Consensus 361 ~a~~~~~-~~s~~~llff~~av~mG~g~~lv~tFLfWHled~-~~~~~LfGv~~a~~~~gEI~~~-ffs~klI~kiGHv~ 437 (618)
T KOG3762|consen 361 LADVGKV-FASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDL-GGIKTLFGVVSALCHAGEILFY-FFSFKLIEKIGHVN 437 (618)
T ss_pred HHHHHHH-hcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhhccchHHHH-HHHHHHHHHhcccc
Confidence 3443333 4467777777888888888888888887788886 5555555755555555555555 88899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCcchHHHH
Q 018388 315 LLSLGLFAACINMFICSISWSAWVPYA 341 (357)
Q Consensus 315 ~~~~~~~~~~i~~~~~~~~~~~~~~~~ 341 (357)
++..++....+-++.++..++.|....
T Consensus 438 v~~lgLa~~~~Rf~~~S~L~n~W~vLP 464 (618)
T KOG3762|consen 438 VMYLGLACNVGRFLYYSYLQNPWMVLP 464 (618)
T ss_pred eeeehhhHHHHHHHHHHHhcCchheee
Confidence 999999999999999999888887554
No 251
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.89 E-value=0.017 Score=51.81 Aligned_cols=256 Identities=12% Similarity=0.098 Sum_probs=150.6
Q ss_pred HHHHHHHHHH-HHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHcc---------c----------hh-----H-
Q 018388 53 SGFQQAIIGL-GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR---------S----------IS-----F- 106 (357)
Q Consensus 53 ~g~~~~~~~~-~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~---------~----------~~-----~- 106 (357)
..++=+..-+ +.++..++.+++.++..|.+++-.-+..+....+++++.- + .+ .
T Consensus 63 I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~i 142 (509)
T COG3202 63 ISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFI 142 (509)
T ss_pred hHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeee
Confidence 4555555555 5677888999999999999998877777666666666531 1 00 0
Q ss_pred ----HHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHhhh-------------
Q 018388 107 ----FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLST------------- 169 (357)
Q Consensus 107 ----~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------------- 169 (357)
.|..-+...+.-+.+.-...-.-.....|.+..||-.|..+.++...+++..++..+..+++-
T Consensus 143 li~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~ 222 (509)
T COG3202 143 LIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLL 222 (509)
T ss_pred EeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHH
Confidence 133333344444422122222455678899999999999999999999999988877776521
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccccccccCCCCCCCCccccccchhHHHHHHhhhcccch
Q 018388 170 -TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTL 248 (357)
Q Consensus 170 -~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (357)
+..+.+.+..+.++..+ .+++.+.-.+++.-- .+...+++.++.+-...+..+.+.|.|.+
T Consensus 223 ~~~~~~vi~~~~~i~~~l-~~~~~r~il~~~~f~-----------------~~~~~kk~~~k~k~~~~~s~k~i~~SkyL 284 (509)
T COG3202 223 LQILFIVIVILGIIAILL-YRYINRNVLTDPLFY-----------------LRAKKKKKKKKLKLGLIESFKMILRSKYL 284 (509)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhhcccCcchh-----------------HHHhcccccccccCcHHHHHHHHHhhhHH
Confidence 22233333333333333 233322111111100 00000111222333566777778889999
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcc---hHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHH
Q 018388 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN---QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (357)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i 325 (357)
+...+...+++.+...+....-.-.++.+-.+.+ -.|.+....++...+.....++.+.+|.|-....++.-+...+
T Consensus 285 ~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~li 364 (509)
T COG3202 285 GAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLI 364 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHH
Confidence 9988888888888777765544444433322222 2345556666665555657888999999977665555444444
Q ss_pred H
Q 018388 326 N 326 (357)
Q Consensus 326 ~ 326 (357)
+
T Consensus 365 t 365 (509)
T COG3202 365 T 365 (509)
T ss_pred H
Confidence 4
No 252
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.84 E-value=0.00019 Score=65.42 Aligned_cols=156 Identities=13% Similarity=0.106 Sum_probs=92.8
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh----cCcchhh
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAML 84 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr----~Grk~~l 84 (357)
.++...+..+......+.....+|.++++ ..+.+..+.+.+...+.++.+++.+..|.++|| ..+|...
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~-------~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~ 346 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKS-------NGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLF 346 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHc-------CCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 35666777777777777778888999874 234555677888888999999999999999999 6666666
Q ss_pred hHHHHHHH-HHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchh-HHHHHHHHHHHHHHHh-hH
Q 018388 85 TLPLTLSI-IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRA-SAFGILLGVLSASFVC-GT 161 (357)
Q Consensus 85 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~-~~~~~~~~~~~~g~~~-g~ 161 (357)
.....+.. ++.......++ ..... +-++.|..+.....+.......+....+.|. ...+....+.+.+..+ ++
T Consensus 347 ~~~~~~~~~~g~~~l~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~ 422 (495)
T KOG2533|consen 347 IVFLCLYAIIGAISLLAAAV---LPGAY-GAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQ 422 (495)
T ss_pred HHHHHHHHHHHHHHHHhhcc---chHHh-HHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhh
Confidence 65554444 44344444433 11111 2222232233445566777777777654443 3334444444443333 33
Q ss_pred hhhH----HhhhHHHHHH
Q 018388 162 LAAR----FLSTTSAFQA 175 (357)
Q Consensus 162 ~~~~----~l~~~~~f~~ 175 (357)
..-+ ...|.+.|..
T Consensus 423 ~~~~~~ap~y~~~~~f~~ 440 (495)
T KOG2533|consen 423 LFRSLDAPRYGWGAVFYM 440 (495)
T ss_pred hcccccCcchhhhhHHHH
Confidence 3332 2466666743
No 253
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.84 E-value=0.00032 Score=60.33 Aligned_cols=123 Identities=20% Similarity=0.201 Sum_probs=102.7
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcC--cchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhc
Q 018388 43 LDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG--RKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMV 120 (357)
Q Consensus 43 ~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~G--rk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 120 (357)
...++.++.+.|-+.+...+...+.+....+..||.. -|-.+..+..+..=..++.+.++. ...++.+-.+-.+
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~---~~~l~~~s~l~sf- 364 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLART---PVVLYLGSTLKSF- 364 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcccc---chhhhHHHHHHHH-
Confidence 3467888888999999999999999999999999987 677777777776666677777777 5666777777777
Q ss_pred ccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh-hh
Q 018388 121 CEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-ST 169 (357)
Q Consensus 121 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-~~ 169 (357)
+++...+....++....|.++||..+|+.....+++-.+||+++|.. .|
T Consensus 365 ~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 365 STASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 66666688889999999999999999999999999999999999775 45
No 254
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.81 E-value=0.0021 Score=60.09 Aligned_cols=136 Identities=19% Similarity=0.140 Sum_probs=93.7
Q ss_pred HHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccch
Q 018388 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQR 142 (357)
Q Consensus 63 ~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r 142 (357)
.........+...|++|||.....+..+..++.+..++..+....+...+...+..+ +.+........+.+|..|..-|
T Consensus 362 ~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~el~pt~~r 440 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKF-FIGSAFNLIFLYSAELIPTVVR 440 (521)
T ss_pred HHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHhhccHHHH
Confidence 444444556899999999999999999999999999988763321112222333222 2233334568899999999999
Q ss_pred hHHHHHHHHHHHHHHHhhHhhhHHhhh---HHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 018388 143 ASAFGILLGVLSASFVCGTLAARFLST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199 (357)
Q Consensus 143 ~~~~~~~~~~~~~g~~~g~~~~~~l~~---~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~ 199 (357)
..+.+..+....+|.+++|.+-..... ...+.+.+....+...+...++||+.....
T Consensus 441 ~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l 500 (521)
T KOG0255|consen 441 NTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETKGKPL 500 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCcccCCCCC
Confidence 999999999999999999987755432 222222344555555566678999876543
No 255
>PTZ00207 hypothetical protein; Provisional
Probab=97.78 E-value=0.00027 Score=65.86 Aligned_cols=82 Identities=10% Similarity=0.154 Sum_probs=59.3
Q ss_pred HHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhc------CcchHHHH-H
Q 018388 270 LYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS------WSAWVPYA-T 342 (357)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~-~ 342 (357)
...+++.+|+|..+.+.+.+... .....+ +..|++.||+|+|+++.++.++..++.++.+++ .+.+.+++ .
T Consensus 50 s~~L~~~lgls~~~l~~i~svg~-~~g~~~-lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r 127 (591)
T PTZ00207 50 SGAMQARYNLTQRDLSTITTVGI-AVGYFL-LPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYN 127 (591)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHH-HHHHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHH
Confidence 33556678999999888876633 333445 577999999999999999999999999888886 34454444 3
Q ss_pred HHHHHhhhccc
Q 018388 343 TAFSVLVVFAT 353 (357)
Q Consensus 343 ~~~~~~~~~~~ 353 (357)
.+.+.|.+...
T Consensus 128 ~l~G~G~~~~~ 138 (591)
T PTZ00207 128 GLMTLGCMLFD 138 (591)
T ss_pred HHHHHHHHHHH
Confidence 45566655443
No 256
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.75 E-value=4.4e-07 Score=82.94 Aligned_cols=139 Identities=20% Similarity=0.207 Sum_probs=91.7
Q ss_pred HHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHH--H--ccchh---HHHHHHHHHHHhhhcccchHHHHHHHHH
Q 018388 61 GLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA--Y--RRSIS---FFYAYYALRTLTAMVCEGSINCLALAYV 133 (357)
Q Consensus 61 ~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~--~--~~~~~---~~~~~~~~r~l~G~~~~~~~~~~~~~~i 133 (357)
.+...++.+....+.||+|||+.++.+..+.++.....+ . .++.. .............. ......+....+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~-~~~g~~~~~~~~~ 374 (451)
T PF00083_consen 296 GLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAF-FSLGWGPLPWIYT 374 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccc-ccccccccccccc
Confidence 344556667778999999999999999888877766664 1 11110 01111111111111 1223335677888
Q ss_pred hhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 018388 134 ADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD 200 (357)
Q Consensus 134 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~ 200 (357)
+|.+|.+.|+++.++......++..++|.+...+ +-...+.+.+.+..+..+..++++||++....+
T Consensus 375 ~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ 445 (451)
T PF00083_consen 375 AELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLE 445 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHH
Confidence 9999999999999999988888888887665553 323456666666677777778889998765433
No 257
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.74 E-value=0.00036 Score=62.60 Aligned_cols=91 Identities=12% Similarity=0.093 Sum_probs=75.9
Q ss_pred hhhhhHHHHHhhhhhcccCcch-HHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcchHHH
Q 018388 262 EGGMQASFLYFLKAQFHFNKNQ-FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPY 340 (357)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 340 (357)
.=...++...++.+.+|++..+ .|.+.+....+..+.. +..|++.||+|.|+++..+.+...+..+++.++++...+.
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~q-Ip~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~ 119 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVL-VPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQ 119 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345666666777788999999 9999999999999999 8999999999999999999999999999999987766655
Q ss_pred H-HHHHHHhhhccc
Q 018388 341 A-TTAFSVLVVFAT 353 (357)
Q Consensus 341 ~-~~~~~~~~~~~~ 353 (357)
+ =+++|++.|...
T Consensus 120 i~R~llGvaEA~~~ 133 (511)
T TIGR00806 120 LMEVFYSVTMAARI 133 (511)
T ss_pred HHHHHHHHHHHHHH
Confidence 5 467787776543
No 258
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.72 E-value=0.001 Score=60.30 Aligned_cols=119 Identities=16% Similarity=0.198 Sum_probs=100.8
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhh-hhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhccc
Q 018388 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIG-NLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122 (357)
Q Consensus 44 ~~~~~s~~~~g~~~~~~~~~~~i~~~~~G-~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 122 (357)
..++++....+...+.......+++.+.. .+...+|-|+....++..-.+.....+++++ .|..+....+.++ .
T Consensus 270 ~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~---~w~~~~~~v~~~~-~- 344 (463)
T KOG2816|consen 270 AKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATE---TWMMFAAGVVVAL-A- 344 (463)
T ss_pred eecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhcc---chhhhHHHHHHHh-h-
Confidence 35666677778777777777788887776 7777889999999999999999999999999 7888888888887 4
Q ss_pred chHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 123 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
....|...+.++.+.++|++|+++++.+...++...++|.+-+.+
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 455589999999999999999999999999999999998776654
No 259
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.48 E-value=0.0014 Score=43.80 Aligned_cols=77 Identities=14% Similarity=0.136 Sum_probs=65.2
Q ss_pred HhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcchH
Q 018388 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV 338 (357)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 338 (357)
.+-+.+...+|...+|. ++|..+.|++-+...++..++. +...++.++.++++.+..+.+...+..+.+++.++.+.
T Consensus 6 igRFayTplLP~M~~~~-~ls~~~ag~lasaNy~GYL~GA-l~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~ 82 (85)
T PF06779_consen 6 IGRFAYTPLLPLMQADG-GLSLSQAGWLASANYLGYLVGA-LLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWL 82 (85)
T ss_pred hHHHHHHhHhHHHHHhc-CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 34455677788777765 9999999999999999999998 88889888888889999999999999999998877654
No 260
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.31 E-value=0.0016 Score=58.00 Aligned_cols=104 Identities=16% Similarity=0.142 Sum_probs=77.9
Q ss_pred hhhhHHHHHHHHHHHHHHHccchh------HHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCcc---chhHHHHHHHHH
Q 018388 82 AMLTLPLTLSIIPLAILAYRRSIS------FFYAYYALRTLTAMVCEGSINCLALAYVADNISER---QRASAFGILLGV 152 (357)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~ 152 (357)
|.++++.++..+|.++..++.... ..+.++++-.+.++ |.|..-|...++.+|.++++ +|.+...++..+
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~-G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAV-GTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHH-HHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHh-ccccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 467788888888888855442211 12567888888898 77888899999999999865 466778889999
Q ss_pred HHHHHHhhHhhhHHh----hhHHHHHHHHHHHHHHHHH
Q 018388 153 LSASFVCGTLAARFL----STTSAFQAATIVSMLAAAY 186 (357)
Q Consensus 153 ~~~g~~~g~~~~~~l----~~~~~f~~~~~~~~~~~~~ 186 (357)
.++|..+++.+.+++ +|.+.|.+.++..++..+.
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHH
Confidence 999999998887776 7899999888775555443
No 261
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.22 E-value=0.019 Score=51.74 Aligned_cols=152 Identities=18% Similarity=0.210 Sum_probs=98.3
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh---hcCcchhh
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD---QYGRKAML 84 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~d---r~Grk~~l 84 (357)
++...+....+..++..+......|.-..-....+.. +....++..-...++..+++.+.+.+++ |+||++.+
T Consensus 240 ~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n----~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~ 315 (461)
T KOG3098|consen 240 PKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSN----TTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTV 315 (461)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCc----chhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcch
Confidence 3445555555666666666666666655431111111 1122344444446666667777777765 57999999
Q ss_pred hHHHHHHHHHHHHHHHccchh---------------HHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHH
Q 018388 85 TLPLTLSIIPLAILAYRRSIS---------------FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGIL 149 (357)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 149 (357)
.++..+..++.++.-...... .....++.-++.|+ +-+......+..+.+.. +++|.++.++.
T Consensus 316 ~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~-~D~~~~t~~~~ii~~~~-~~~~~~~fsi~ 393 (461)
T KOG3098|consen 316 LIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGF-GDACFNTQRYVIIALLY-PDDRAQAFSLF 393 (461)
T ss_pred hHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhh-HHHHHHHHHHHHHHHHh-cCchHHHHHHH
Confidence 999988888877766542110 14466777888998 77888788888888888 58888999888
Q ss_pred HHHHHHHHHhhHhhhH
Q 018388 150 LGVLSASFVCGTLAAR 165 (357)
Q Consensus 150 ~~~~~~g~~~g~~~~~ 165 (357)
..-.+++..++-....
T Consensus 394 kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 394 KFYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHHHHHHHhhhhh
Confidence 8888887766544443
No 262
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.20 E-value=0.00085 Score=59.29 Aligned_cols=83 Identities=13% Similarity=0.210 Sum_probs=72.7
Q ss_pred hhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcchHHHHH-HHHHHhhhc
Q 018388 273 LKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVF 351 (357)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~ 351 (357)
.++.+|.++...|++.....+...+.+ .+.|++.||++|++++.+|..+..++.+..++....|.+.+. .+.|+|.+.
T Consensus 59 v~~~fni~~s~~Gll~~vf~v~~~i~s-Pl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs 137 (493)
T KOG1330|consen 59 VQTYFNISDSELGLLQTVFIVVFMIAS-PLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEAS 137 (493)
T ss_pred HHHhcCCCchhccchhHHHHHHHHHHH-HHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Confidence 345579999999999999999999999 888999999999999999999999999999999888877774 677999888
Q ss_pred ccccC
Q 018388 352 ATPSV 356 (357)
Q Consensus 352 ~~p~~ 356 (357)
..|..
T Consensus 138 ~~~ia 142 (493)
T KOG1330|consen 138 YSPIA 142 (493)
T ss_pred hcccc
Confidence 87753
No 263
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.02 E-value=0.0014 Score=62.49 Aligned_cols=72 Identities=13% Similarity=0.194 Sum_probs=58.5
Q ss_pred hhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhc
Q 018388 261 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 333 (357)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 333 (357)
...++....-.-+++++++++.+.|.+.+.+.++..+.. ++.+++.||.+||+.+.++.++.+++.+++++.
T Consensus 47 ~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~-i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alp 118 (633)
T TIGR00805 47 LYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLI-IFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLP 118 (633)
T ss_pred HHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHH-HHHHHhhcccCcceEEEecHHHHHHHHHHHhCh
Confidence 333443333345566789999999999999999999988 788999999999999999999999998877653
No 264
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.91 E-value=0.029 Score=48.46 Aligned_cols=75 Identities=17% Similarity=0.071 Sum_probs=58.1
Q ss_pred hcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcchHHHHH-HHHHHhhhcc
Q 018388 276 QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFA 352 (357)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 352 (357)
.+|++.++++.++........+.+ .+.|.+.||+|||+.-+...++..++++. -..++...+++. ++-|++..+.
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g-~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGiaTSLL 138 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFG-TFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIATSLL 138 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHHHHH
Confidence 469999999999998888888888 67799999999999988888888888854 344556666664 4445555443
No 265
>PRK03612 spermidine synthase; Provisional
Probab=96.88 E-value=0.12 Score=47.98 Aligned_cols=118 Identities=14% Similarity=0.002 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhH-HHHHHH-HHHHHHHHccch--hHHHHHHHHHHHhhhcccc
Q 018388 48 LAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL-PLTLSI-IPLAILAYRRSI--SFFYAYYALRTLTAMVCEG 123 (357)
Q Consensus 48 ~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~-~~~~~~-~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~~~ 123 (357)
-+....+.+.+++..+..+|+...+++.++--|+....- ...+.+ ++..+....... ......+...++.++ ..|
T Consensus 47 ~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~-l~G 125 (521)
T PRK03612 47 DSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGL-LIG 125 (521)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 334556888999999999999988887643322222111 111111 111111111110 001122233344555 445
Q ss_pred hHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
...|....+..+.. .++-++..|.......+|.++|+++.+++
T Consensus 126 ~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 126 MEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFL 168 (521)
T ss_pred HHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHH
Confidence 55566666555432 23346677888888888888888777663
No 266
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.81 E-value=0.0019 Score=56.98 Aligned_cols=101 Identities=9% Similarity=0.081 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhcCc-chhhhHHHHHHHHHHHH-HHHccchhHHHHHHHHHHHhhhcccchHHHH
Q 018388 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGR-KAMLTLPLTLSIIPLAI-LAYRRSISFFYAYYALRTLTAMVCEGSINCL 128 (357)
Q Consensus 51 ~~~g~~~~~~~~~~~i~~~~~G~l~dr~Gr-k~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 128 (357)
...|++.....++.++++...|.+.||... |...++......++... .....+....+.++..-.+.|. ......|.
T Consensus 301 ~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~-~~~~~~Pi 379 (480)
T KOG2563|consen 301 VFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGF-FGTGYLPI 379 (480)
T ss_pred cccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHH-hhcCCCCc
Confidence 456999999999999999999999999876 66666666666555322 2222222223555666667777 43445588
Q ss_pred HHHHHhhCCCccchhHHHHHHHHH
Q 018388 129 ALAYVADNISERQRASAFGILLGV 152 (357)
Q Consensus 129 ~~~~i~~~~~~~~r~~~~~~~~~~ 152 (357)
..-+-.|.+-|..-+...|.....
T Consensus 380 g~ElgvE~TyPv~E~tSsGll~~~ 403 (480)
T KOG2563|consen 380 GFELGVETTYPVAEGTSSGLLNLS 403 (480)
T ss_pred ceeeeeeeccccCCcccceeEEee
Confidence 888877776544434444544433
No 267
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=96.68 E-value=0.0083 Score=50.27 Aligned_cols=178 Identities=12% Similarity=0.078 Sum_probs=96.6
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhc-CC------CccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcch
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALC-PG------LDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA 82 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~ 82 (357)
....++.-.+..+++.++..+--+++.+..+ ++ .+.-+-...-.|.+.-.-.+...+..+......||+---.
T Consensus 14 ~~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rfpf~~ 93 (409)
T KOG3880|consen 14 AVAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRFPFGF 93 (409)
T ss_pred chHHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhcccch
Confidence 3444555556666666555555555554322 00 0111111112366666667778888888888899875444
Q ss_pred hhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHh
Q 018388 83 MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (357)
Q Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (357)
=..+..++.+.+..+.+++++ .+.-+.+-.+..+ ++|.-.. .+--.+..+++. ..+.++.+.+.+.++|..
T Consensus 94 Ri~~~v~~sa~s~~lVafs~s---~~~sL~GV~~aSi-ssGlGEi-TFL~lss~Y~~~----~i~~WSSGTGgAGliGa~ 164 (409)
T KOG3880|consen 94 RIALVVLLSALSFFLVAFSNS---VPMSLLGVVFASI-SSGLGEI-TFLALSSRYPSI----VIAGWSSGTGGAGLIGAS 164 (409)
T ss_pred HHHHHHHHHhcceEEEEeccc---hhHHHhhhhhhhh-cCCccee-ehhhhhccCCCc----eeccccCCCCcchhhhhh
Confidence 445556667777888888888 7666777777777 5554432 222233333322 222333333333444432
Q ss_pred hhHHh------hhHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 018388 163 AARFL------STTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (357)
Q Consensus 163 ~~~~l------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 196 (357)
--..+ ..|...++...+..+.+...++.+++++.
T Consensus 165 SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes 204 (409)
T KOG3880|consen 165 SYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPES 204 (409)
T ss_pred HHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCcc
Confidence 21111 34667777766666666665666655443
No 268
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.57 E-value=0.13 Score=45.71 Aligned_cols=108 Identities=14% Similarity=0.169 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHH--HHHH---HHHHccchhHHHHHHHHHHHhhhcccchHH
Q 018388 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI--IPLA---ILAYRRSISFFYAYYALRTLTAMVCEGSIN 126 (357)
Q Consensus 52 ~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 126 (357)
+--+....|.+|..++.--... +--|+..+.+.+... +..+ ..-+.++ .|..++.-+..|+ .+|..+
T Consensus 282 ~Y~~Y~~~YQ~GVFISRSS~~~----~rir~lwils~LQ~~nl~~~~l~s~~~fips---i~ivf~lif~eGL-lGGa~Y 353 (402)
T PF02487_consen 282 QYRWYQLLYQLGVFISRSSLPF----FRIRRLWILSLLQVINLVFLLLQSWYRFIPS---IWIVFVLIFYEGL-LGGASY 353 (402)
T ss_pred HHHHHHHHHHHHHhhhhcceee----eehhhHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHH-hhhHHH
Confidence 4455566666666555433221 223455444433222 2222 2223455 7888889999999 667777
Q ss_pred HHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 127 CLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 127 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
...+..+.|-.++|+|..+++..+.+-++|..++..++-.+
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999988877554
No 269
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.53 E-value=0.022 Score=51.74 Aligned_cols=145 Identities=8% Similarity=0.058 Sum_probs=95.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHH-c---------cchhHHHHHHHHHHHh
Q 018388 48 LAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY-R---------RSISFFYAYYALRTLT 117 (357)
Q Consensus 48 ~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~r~l~ 117 (357)
.+....|.+..+..++..++.....+.--+..-|+++..+.++..+..+.-.. . ++ .+..+.--++.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d---~~f~lgd~~l~ 328 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPD---QWFALGDTILE 328 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCC---eEEEEEhHHHH
Confidence 66777888888888999999999988888888888888887776655543221 1 11 11122233344
Q ss_pred hhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHhh------------hHHHHHHHHHHHHHHHH
Q 018388 118 AMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLS------------TTSAFQAATIVSMLAAA 185 (357)
Q Consensus 118 G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~------------~~~~f~~~~~~~~~~~~ 185 (357)
.+ .....+-....+++|..|+..-+...++.....++|..++..++..+. -.+..++.....++...
T Consensus 329 ~~-~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ 407 (433)
T PF03092_consen 329 EV-IGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLP 407 (433)
T ss_pred HH-HHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence 44 223333457788999999999999999999999999888888777651 12334444444433333
Q ss_pred HHHHhccCCCCC
Q 018388 186 YMRVFLKDDVPN 197 (357)
Q Consensus 186 ~~~~~~~e~~~~ 197 (357)
+ ...+|++++.
T Consensus 408 l-l~lLp~~~~~ 418 (433)
T PF03092_consen 408 L-LFLLPPQKRI 418 (433)
T ss_pred H-HHHcCCCchh
Confidence 3 4456665443
No 270
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.26 E-value=0.0041 Score=46.21 Aligned_cols=63 Identities=21% Similarity=0.151 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcchHHHH-HHHHHHhhhccc
Q 018388 290 IAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFAT 353 (357)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 353 (357)
...++..+++ +..+++.||++||+.+..+.....++.+.....++.+.... ..+.+++.+...
T Consensus 6 ~~~~~~~~~~-~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 69 (141)
T TIGR00880 6 GYALGQLIYS-PLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFAL 69 (141)
T ss_pred eehhHHHHHH-hhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 3455666777 78899999999999999998888888777777666555444 345555555443
No 271
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.15 E-value=0.035 Score=52.94 Aligned_cols=95 Identities=14% Similarity=0.097 Sum_probs=70.4
Q ss_pred hhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhh-ccchhHHHHHHHHHHHHHHHHHHhcCcc---
Q 018388 261 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP-ILGEAKLLSLGLFAACINMFICSISWSA--- 336 (357)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~--- 336 (357)
.++++...+..|+.+.+|++...+..++.......-+.. ++++++.| ++|+++.+..+.++..++..++.+....
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~p-ilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTP-LIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 345667777888888889998887877777777777766 78899998 5799999999999999998887764211
Q ss_pred -----hHHHH-HHHHHHhhhcccccC
Q 018388 337 -----WVPYA-TTAFSVLVVFATPSV 356 (357)
Q Consensus 337 -----~~~~~-~~~~~~~~~~~~p~~ 356 (357)
...+. ..+...|.|..-|++
T Consensus 81 ~~~~~~~~l~gLaLia~G~GgiKp~v 106 (654)
T TIGR00926 81 HPLHDLLDLLGLALIALGTGGIKPCV 106 (654)
T ss_pred cchHHHHHHHHHHHHHhhccccccCc
Confidence 11223 455677777777765
No 272
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.12 E-value=1 Score=40.96 Aligned_cols=86 Identities=9% Similarity=0.043 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHH-HHHHHH----ccchhHHHHHHHHHHHhhhcccchHHH
Q 018388 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIP-LAILAY----RRSISFFYAYYALRTLTAMVCEGSINC 127 (357)
Q Consensus 53 ~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~r~l~G~~~~~~~~~ 127 (357)
..+......+...+..+..-.+..|+..|.=+..++++..+. .....+ .+....++..++.-++.|+ +.+..+.
T Consensus 47 ~~~~~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~-~~~~~q~ 125 (437)
T TIGR00939 47 NTYYTLASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINS-GMALLQG 125 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHh-hhhhhcc
Confidence 344444555666666666666666766533333343322222 111111 1221235666677778887 6666666
Q ss_pred HHHHHHhhCCCcc
Q 018388 128 LALAYVADNISER 140 (357)
Q Consensus 128 ~~~~~i~~~~~~~ 140 (357)
...++.+ .+|++
T Consensus 126 s~~gla~-~fp~~ 137 (437)
T TIGR00939 126 SLFGLAG-VFPST 137 (437)
T ss_pred cchhhcc-cCCHH
Confidence 6666666 45543
No 273
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.98 E-value=0.41 Score=43.24 Aligned_cols=120 Identities=13% Similarity=0.037 Sum_probs=82.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHH---Hccc----hhHHHHHHHHHHHhhh
Q 018388 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA---YRRS----ISFFYAYYALRTLTAM 119 (357)
Q Consensus 47 ~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~r~l~G~ 119 (357)
+.+....|..-+...+..+.+.....++.+|+|..|.=+.+.........++. +.+. ......++.+-.+.=+
T Consensus 289 G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~ 368 (432)
T PF06963_consen 289 GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRI 368 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHH
Confidence 67778889999999999999999999999999998877766654433322222 2222 1223344444444444
Q ss_pred cccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 120 VCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 120 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
|- =.+.-+..-++.|.+|+++||...|.-....++-..+--.++-.+
T Consensus 369 GL-W~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 369 GL-WSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HH-HhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22 234457788889999999999999998888887766665554443
No 274
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.45 E-value=0.15 Score=42.27 Aligned_cols=63 Identities=14% Similarity=0.223 Sum_probs=53.3
Q ss_pred HHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 018388 268 SFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI 332 (357)
Q Consensus 268 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 332 (357)
.....+++.+|+|.++...+-....++..+ + +..|.+.||.|++.++.+|.....+++.++..
T Consensus 23 ~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l 85 (250)
T PF06813_consen 23 AYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-G-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWL 85 (250)
T ss_pred hhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-c-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 344466778899999988888888888776 4 78899999999999999999999999887765
No 275
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=95.35 E-value=0.41 Score=45.01 Aligned_cols=130 Identities=18% Similarity=0.177 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhc-CcchhhhHHHHHHHHHHHHHHHccc----------------------hhHHHHHH
Q 018388 55 FQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPLTLSIIPLAILAYRRS----------------------ISFFYAYY 111 (357)
Q Consensus 55 ~~~~~~~~~~~i~~~~~G~l~dr~-Grk~~l~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~ 111 (357)
-....+.-......+..+.++|.| ||-+++.++.++..++..+..++.. ......++
T Consensus 77 ~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~ 156 (571)
T KOG1237|consen 77 NNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLY 156 (571)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHH
Confidence 334444555666778899999975 8889999888888877555444211 11234566
Q ss_pred HHHHHhhhcccchHHHHHHHHHhhCCCc---cc---hhHHHHHHHHHHHHHHHhhHhhhHHh----hhHHHHHHHHHHHH
Q 018388 112 ALRTLTAMVCEGSINCLALAYVADNISE---RQ---RASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSM 181 (357)
Q Consensus 112 ~~r~l~G~~~~~~~~~~~~~~i~~~~~~---~~---r~~~~~~~~~~~~~g~~~g~~~~~~l----~~~~~f~~~~~~~~ 181 (357)
.+.-+..+ +.|...|...++-+|.+++ ++ +...+.++....+.|..++-.+--+. +|.+.|.+..+...
T Consensus 157 ~~l~lia~-G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~ 235 (571)
T KOG1237|consen 157 GALYLIAL-GAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNA 235 (571)
T ss_pred HHHHHhee-ccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHH
Confidence 66667777 6677788999999999883 22 22567788888888888776555443 88888887766644
Q ss_pred HHHH
Q 018388 182 LAAA 185 (357)
Q Consensus 182 ~~~~ 185 (357)
++.+
T Consensus 236 lai~ 239 (571)
T KOG1237|consen 236 LAIL 239 (571)
T ss_pred HHHH
Confidence 4433
No 276
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.69 E-value=0.49 Score=43.04 Aligned_cols=111 Identities=11% Similarity=0.112 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhcCcc-hhhhHHHHHHHHHH---HHHHHcc------chhHHHHHHHHHHHhhhcc
Q 018388 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRK-AMLTLPLTLSIIPL---AILAYRR------SISFFYAYYALRTLTAMVC 121 (357)
Q Consensus 52 ~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk-~~l~~~~~~~~~~~---~~~~~~~------~~~~~~~~~~~r~l~G~~~ 121 (357)
..-....++.++..+|..+..+.. .-++| +.+.+..+.-.+.. ++|..-+ -...-+..++..++.|+ .
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gl-t 385 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGF-S 385 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHH-h
Confidence 445667778888888877554321 11223 13333333333332 2332211 00114566777899999 7
Q ss_pred cchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhh
Q 018388 122 EGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (357)
Q Consensus 122 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 164 (357)
.|...+.+..+..+..+++||..+-.+...+..+|..+|..++
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888888899999999999999999999999988887654
No 277
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.61 E-value=0.54 Score=39.13 Aligned_cols=133 Identities=16% Similarity=0.099 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhcCcc--hhhhHHHHHHHHHHHHHHH----ccchhHHHHHHHHHHHhhhcccchHHH
Q 018388 54 GFQQAIIGLGTLVMMPVIGNLSDQYGRK--AMLTLPLTLSIIPLAILAY----RRSISFFYAYYALRTLTAMVCEGSINC 127 (357)
Q Consensus 54 g~~~~~~~~~~~i~~~~~G~l~dr~Grk--~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~r~l~G~~~~~~~~~ 127 (357)
|.+.+.+.++.++++-+..++..|-.+| +.+.+..+...+...+... +|+-.....-+++..+.-. +.|.++|
T Consensus 285 GfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~-cvGlfwP 363 (454)
T KOG4332|consen 285 GFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEA-CVGLFWP 363 (454)
T ss_pred hhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHH-HHhhcch
Confidence 8999999999999999998888876654 3444544444443333222 2221112222333333344 5567889
Q ss_pred HHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhh----hHHhhhHHHHHHHHHHHHHHHHHH
Q 018388 128 LALAYVADNISERQRASAFGILLGVLSASFVCGTLA----ARFLSTTSAFQAATIVSMLAAAYM 187 (357)
Q Consensus 128 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~----~~~l~~~~~f~~~~~~~~~~~~~~ 187 (357)
....+=.+..|+++|...+.++..-.++=.-++-.. +--.+-|..|-+..+...+..+..
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHH
Confidence 999999999999999999988766554432222111 001245677777766655544443
No 278
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=94.57 E-value=0.35 Score=39.95 Aligned_cols=51 Identities=2% Similarity=-0.076 Sum_probs=33.4
Q ss_pred cchhHHHHHHHHHHHHHHHhh--HhhhH-----H--hhhHHHHHHHHHHHHHHHHHHHHh
Q 018388 140 RQRASAFGILLGVLSASFVCG--TLAAR-----F--LSTTSAFQAATIVSMLAAAYMRVF 190 (357)
Q Consensus 140 ~~r~~~~~~~~~~~~~g~~~g--~~~~~-----~--l~~~~~f~~~~~~~~~~~~~~~~~ 190 (357)
|+|+........+.++|.++. |.+-+ . -.|++.+.+.+++.++.+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 566777777777778887654 43322 1 279999888888766665554443
No 279
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=94.43 E-value=0.11 Score=47.21 Aligned_cols=82 Identities=16% Similarity=0.199 Sum_probs=64.2
Q ss_pred chHHHHHHHHHHHHhhhhhhHHHHHhhhh--hcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccch-hHHHHHHHHHH
Q 018388 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKA--QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE-AKLLSLGLFAA 323 (357)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~ 323 (357)
.++...+..++.......+.+..-.|+++ . +-+.+..|+..+...++..+.+ +..++..+|.+. |+-++.+.++.
T Consensus 35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~-~A~~~ffG~viaa~slg~~i~~-liF~~Ws~k~~~~k~Pli~s~ii~ 112 (488)
T KOG2325|consen 35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDP-TATATFFGLVIAASSLGHAIFS-LIFGIWSNKTGSVKKPLIVSFLIA 112 (488)
T ss_pred hHHHHHHHHHHHhhhheEEEeecchhhhhcCC-CCCcchhhHHHHHHHHHHHhcc-hhhcccccccCCcccCHHHHHHHH
Confidence 44556666666666666666666667776 4 7777888999999999999999 677888888775 88899999999
Q ss_pred HHHHHHH
Q 018388 324 CINMFIC 330 (357)
Q Consensus 324 ~i~~~~~ 330 (357)
.++.++.
T Consensus 113 ~~g~llY 119 (488)
T KOG2325|consen 113 IIGNLLY 119 (488)
T ss_pred HHHHHHH
Confidence 9998777
No 280
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=94.31 E-value=3.1 Score=35.82 Aligned_cols=72 Identities=14% Similarity=0.021 Sum_probs=48.9
Q ss_pred HHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCC
Q 018388 61 GLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNI 137 (357)
Q Consensus 61 ~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~ 137 (357)
.+.....+++.+.+..++|-|..+.++...+..... .+-.+.+..++..-...|+ +.+..+..--+|+++.-
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA----~Nl~pr~~tlVPa~~~~G~-aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA----ANLEPRYETLVPAGLVLGM-AAGPIWASKGTYLTPMG 139 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH----hhcchhHHhhccHHHhhcc-ccccccccCcceecHHH
Confidence 444566667777899999999999888776644322 2222226778888899999 77777665555555443
No 281
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.25 E-value=0.8 Score=34.94 Aligned_cols=65 Identities=18% Similarity=0.143 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcchHHHH-HHHHHHhhhccccc
Q 018388 289 LIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPS 355 (357)
Q Consensus 289 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~ 355 (357)
++......+.. ++.+.+.+++|.|+.++++.+...+-.... +.++.+..+. ..+.|++.+....+
T Consensus 44 ai~Y~~~~~s~-l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~a 109 (156)
T PF05978_consen 44 AILYGSFAISC-LFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTA 109 (156)
T ss_pred HHHHHHHHHHH-HhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHh
Confidence 33444445555 778899999999999999998887655444 3444455555 56778887766543
No 282
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.20 E-value=3.9 Score=36.45 Aligned_cols=112 Identities=10% Similarity=0.011 Sum_probs=53.2
Q ss_pred HHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHc
Q 018388 22 FATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101 (357)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~ 101 (357)
..+++....-+++.++.-+.+. +.......+....+..++....=-.+.-|. |+++.........+....+.++
T Consensus 32 lpWN~fiTa~~y~~~~~~~~~~-----~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~~~~l~~~~il~i~~l~~~ 105 (406)
T KOG1479|consen 32 LPWNMFITASDYYYYRFPGYHN-----SKNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRVGYLLSLIAILFIVTLDLA 105 (406)
T ss_pred cchHhhhccHHHHHhhcCCCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 3346666777777665321111 445555656666666666666666666662 2222221111112222222222
Q ss_pred c--c----hhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccc
Q 018388 102 R--S----ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ 141 (357)
Q Consensus 102 ~--~----~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~ 141 (357)
. + ...++..++.-.+.+. +.+..+...+...++ .|+|.
T Consensus 106 ~v~~~~~~~~ff~vt~~~vv~~~~-a~a~~qgs~~G~a~~-~P~~y 149 (406)
T KOG1479|consen 106 LVKTDTWTNGFFLVTLIIVVLLNL-ANAVVQGSLYGLAGL-FPSEY 149 (406)
T ss_pred hhccCCccchhHHHHHHHHHHHhh-hhhhhccchhhhhhc-CCHHH
Confidence 1 1 1124455555666666 555555445555554 45443
No 283
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=93.33 E-value=4.1 Score=33.85 Aligned_cols=42 Identities=7% Similarity=-0.160 Sum_probs=21.7
Q ss_pred HHHhhhhhhHHHHHhhhhhc----ccCcchHHHHHHHHHHHHHHHH
Q 018388 258 SGLSEGGMQASFLYFLKAQF----HFNKNQFADLMLIAGLAGTISQ 299 (357)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~ 299 (357)
.....++.+..=..|.+++- +-+.....++++-.........
T Consensus 190 ~aGvlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs~f~GIfltSt 235 (254)
T PF07857_consen 190 FAGVLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFSHFSGIFLTST 235 (254)
T ss_pred HHHHHHhcccchHHHHHhCccccCCCCCcchheeHHHHhhHHHHHH
Confidence 33444444444445777763 3455555666655544444444
No 284
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=91.78 E-value=4 Score=36.62 Aligned_cols=98 Identities=21% Similarity=0.178 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHH--HHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHH
Q 018388 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL--TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLA 129 (357)
Q Consensus 52 ~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 129 (357)
..|.+.++..+...++++..|.+..++.+-.-+.++. ++.+...++++..++ .|..+++.++.+. ......+.+
T Consensus 286 YNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~---Iwv~Y~~yIif~~-~y~fliTiA 361 (412)
T PF01770_consen 286 YNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGN---IWVCYAGYIIFRS-LYMFLITIA 361 (412)
T ss_pred cchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHH-HHHHHHHHH
Confidence 4588888899999999999999988887755444433 344455566677778 8888888887776 445555777
Q ss_pred HHHHhhCCCccchhHHHHHHHHHH
Q 018388 130 LAYVADNISERQRASAFGILLGVL 153 (357)
Q Consensus 130 ~~~i~~~~~~~~r~~~~~~~~~~~ 153 (357)
..-++....+|.-+..+|++....
T Consensus 362 ~~qIA~~l~~e~yaLVFGiNtf~A 385 (412)
T PF01770_consen 362 SFQIAKNLSEERYALVFGINTFVA 385 (412)
T ss_pred HHHHHHhccccceeeeeeeHHHHH
Confidence 777888888788787777765543
No 285
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.44 E-value=2.1 Score=38.02 Aligned_cols=133 Identities=12% Similarity=0.154 Sum_probs=85.9
Q ss_pred HhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHH-HHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccc
Q 018388 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAI-IGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRS 103 (357)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~-~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~ 103 (357)
.+...+.|.+..+.. ++...+.+..-+...+ +.+...+|.+.+.++-++- +|.+.+..++-.+..-++.+++.
T Consensus 260 ~VTLsiFPg~~~~~~----~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~--~r~l~i~v~lR~lfiPlF~~cn~ 333 (406)
T KOG1479|consen 260 FVTLSIFPGFCSEVK----SSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPD--PRKLTIPVLLRLLFIPLFLLCNY 333 (406)
T ss_pred eeeeEecchhhcccc----cCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCC--CceehHHHHHHHHHHHHHHHhcc
Confidence 334456777776521 1222244555666666 8888888877776665543 33333444443333333332211
Q ss_pred ------hhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhh
Q 018388 104 ------ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (357)
Q Consensus 104 ------~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 164 (357)
+..-++++....+.|+ ..|-.......+..+.++++++..+-.+.......|...|..++
T Consensus 334 ~~~~v~~~~~~~~~~l~~~lgl-snGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 334 PPLPVVFESDGWFIFLMSLLGL-SNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CCCCceecCchHHHHHHHHHHh-ccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 1114677888889999 88888888999999999999998888888888888887776554
No 286
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=91.30 E-value=0.87 Score=40.93 Aligned_cols=123 Identities=10% Similarity=0.075 Sum_probs=73.8
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccc-----hhHHHHH-----HHHHHHHHHHHHHHHHhhhhhhh
Q 018388 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDEC-----SLAIYLS-----GFQQAIIGLGTLVMMPVIGNLSD 76 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~-----g~~~~~~~~~~~i~~~~~G~l~d 76 (357)
+|....+++...+..++..-..-...+++-+.+..++.+. ..-.+.. .|-..++.+...+.+...-++.|
T Consensus 278 pr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~ 357 (498)
T KOG0637|consen 278 PRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSR 357 (498)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666666666655444444444433221121111 1111111 24556778888899999999999
Q ss_pred hcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHH
Q 018388 77 QYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYV 133 (357)
Q Consensus 77 r~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i 133 (357)
|+|-|+.+..+...+.++..+.+..++ .+....-+-..|+ -.+....+-+..+
T Consensus 358 ~~g~r~~y~~~~~~f~~~~~~~gl~~~---~~~~~~~~~~~G~-~~~~~~~~p~~l~ 410 (498)
T KOG0637|consen 358 KFGTRKRYWGGVNAFGLATGLAGLVLN---TYVVLSHRSTAGI-LSSPLLTVPYGAL 410 (498)
T ss_pred hcCcceEEeehhHHHHHHHHHHhhhhh---HHHHHHHHhhcce-eecchhcccHHHH
Confidence 999777777777767777777777777 6667777777776 3344333433333
No 287
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=90.90 E-value=3.5 Score=34.70 Aligned_cols=74 Identities=18% Similarity=0.221 Sum_probs=50.4
Q ss_pred HhhhhhhHHHHHhhhhhcccCc--chHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCc
Q 018388 260 LSEGGMQASFLYFLKAQFHFNK--NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS 335 (357)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 335 (357)
..........+.+..+. +.+. ...+...........++. +..|++.||.|||+.+..+......+.+...+..+
T Consensus 16 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 91 (338)
T COG0477 16 LDLGLLSPALPLLLSTL-SLSSGRLLYGLLLSAFFLGYAIGS-LLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN 91 (338)
T ss_pred HhcchHHHHHHHHHHHc-CCCchhHHHHHHHHHHHHHHHHHh-hhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc
Confidence 33444455566666654 4444 356888888888888887 88899999999998777777654555455555544
No 288
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=89.39 E-value=7.6 Score=34.28 Aligned_cols=78 Identities=18% Similarity=0.211 Sum_probs=53.3
Q ss_pred hhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHH
Q 018388 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~ 87 (357)
+..+.+..+.++...+.-+-......++.+.- ... ......-..+-....++..++.|.+.|+..|+|++...
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~---gns----l~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~ 99 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLG---GNS----LLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTW 99 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHc---Cce----ehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHH
Confidence 34566788888888888777777777765531 111 12334444455666788899999999999999988866
Q ss_pred HHHHH
Q 018388 88 LTLSI 92 (357)
Q Consensus 88 ~~~~~ 92 (357)
+++.-
T Consensus 100 L~lqN 104 (503)
T KOG2601|consen 100 LLLQN 104 (503)
T ss_pred Hhhcc
Confidence 65443
No 289
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=88.04 E-value=2.8 Score=35.84 Aligned_cols=73 Identities=15% Similarity=0.079 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
+..+......+.++ +|..++.-+..|+ -+|..+...+--+.+-.++++|..+++....+-++|..++..++-.
T Consensus 328 ~ff~~~a~~~ftps---i~ivf~lI~~EGL-lGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 328 LFFLLQAWYWFTPS---IWIVFALILFEGL-LGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred HHHHHHHHHHhccH---HHHHHHHHHHHhh-cCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhcc
Confidence 33444556667788 8888888899999 4455556677777777888999999999999999998887766543
No 290
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=87.33 E-value=0.22 Score=42.99 Aligned_cols=108 Identities=14% Similarity=0.114 Sum_probs=3.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhh-cCcchhhhHHHHHHHHH---HHHHHHccc-------hhHHHHHHHHHHHhhhcccc
Q 018388 55 FQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTLPLTLSIIP---LAILAYRRS-------ISFFYAYYALRTLTAMVCEG 123 (357)
Q Consensus 55 ~~~~~~~~~~~i~~~~~G~l~dr-~Grk~~l~~~~~~~~~~---~~~~~~~~~-------~~~~~~~~~~r~l~G~~~~~ 123 (357)
....++.++..+|....++.-=+ -.+|++.. ..+.-.+. .++|-.-++ ...-+..++.-++.|+ ..|
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~-TNG 263 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGF-TNG 263 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHH-ccc
Confidence 45667888888888877653211 12444433 32222222 222211111 0113566778888999 778
Q ss_pred hHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhh
Q 018388 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (357)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 164 (357)
...+....+..+..++++|..+-.+...+..+|..+|..++
T Consensus 264 yl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 264 YLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ---HHHH----------------------------------
T ss_pred hhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999998888888888888887654
No 291
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.15 E-value=0.15 Score=41.86 Aligned_cols=57 Identities=21% Similarity=0.183 Sum_probs=39.7
Q ss_pred hcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHH
Q 018388 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQ 299 (357)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 299 (357)
+++-.+....+.+.+.-........+++.|..+..+++....+++-.+..+.....+
T Consensus 198 F~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS 254 (412)
T KOG4830|consen 198 FGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVS 254 (412)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHH
Confidence 345556666777777777777778889999888778777666666666655555444
No 292
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=86.61 E-value=0.21 Score=46.79 Aligned_cols=79 Identities=11% Similarity=0.231 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 018388 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICS 331 (357)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 331 (357)
.+..+.+ ....++....-.-++++|++++.+.|.+.+.+-++..+.. ++..++.+|..|.+.+-.|.++.+++.++++
T Consensus 9 ~~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~-~~vsy~g~~~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 9 CLLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVV-LFVSYFGGRGHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhhhcCCcceeeecHHHHHHHHHHHh
Confidence 3333444 4444444444456778899999999999999999999988 6667888888888888999999999988776
Q ss_pred h
Q 018388 332 I 332 (357)
Q Consensus 332 ~ 332 (357)
+
T Consensus 87 l 87 (539)
T PF03137_consen 87 L 87 (539)
T ss_dssp -
T ss_pred c
Confidence 5
No 293
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=82.83 E-value=22 Score=29.45 Aligned_cols=24 Identities=17% Similarity=0.032 Sum_probs=14.8
Q ss_pred HhhhhhccchhHHHHHHHHHHHHH
Q 018388 303 MPLLAPILGEAKLLSLGLFAACIN 326 (357)
Q Consensus 303 ~~~l~~~~~~~~~~~~~~~~~~i~ 326 (357)
+.++..|+..|++.+.+..+..+.
T Consensus 260 Gk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 260 GKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred hHHHhhhheeEEEEEecchhHHHH
Confidence 345677888777766665554433
No 294
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=81.93 E-value=36 Score=30.04 Aligned_cols=100 Identities=22% Similarity=0.144 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH--HHHHHHHHHHHccchhHHHHHHHHHHHhhhcccchHHHH
Q 018388 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT--LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128 (357)
Q Consensus 51 ~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 128 (357)
...|..-++..+..++.++..|.+.-++.|..-++++.. ..+...+++..+++ +|..+++.++... .-....+.
T Consensus 271 vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~---Iw~~Ya~yvlfr~-~y~l~iti 346 (433)
T KOG3810|consen 271 VYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQH---IWVCYAGYVLFRV-IYQLTITI 346 (433)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccc---eehhhhhHHHHHh-hHhhhhhH
Confidence 345777788888889999999999999888755444443 33444445555666 6766666666655 44445577
Q ss_pred HHHHHhhCCCccchhHHHHHHHHHHH
Q 018388 129 ALAYVADNISERQRASAFGILLGVLS 154 (357)
Q Consensus 129 ~~~~i~~~~~~~~r~~~~~~~~~~~~ 154 (357)
+..-+++...+|.-|..+|+.....-
T Consensus 347 A~~~iA~nL~~e~~gLvFGiNTFvAl 372 (433)
T KOG3810|consen 347 ATFQIARNLSSELFGLVFGINTFVAL 372 (433)
T ss_pred HHHHHHHhhhhhhheeeeehHHHHHH
Confidence 88888888888888888888765543
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.34 E-value=14 Score=25.85 Aligned_cols=38 Identities=18% Similarity=0.271 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhc-CcchhhhHHH
Q 018388 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPL 88 (357)
Q Consensus 51 ~~~g~~~~~~~~~~~i~~~~~G~l~dr~-Grk~~l~~~~ 88 (357)
+..++-.+.-.++..+.....||+.||| |.++..++..
T Consensus 42 ~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 42 YAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 3445555666777778888899999997 5555544433
No 296
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=72.93 E-value=1.1 Score=38.65 Aligned_cols=18 Identities=22% Similarity=0.405 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 018388 287 LMLIAGLAGTISQLLFMPL 305 (357)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~ 305 (357)
.+..+.++-.+|+ .+..+
T Consensus 187 ~fl~Fn~gD~iGR-~l~~~ 204 (309)
T PF01733_consen 187 LFLLFNLGDFIGR-FLASW 204 (309)
T ss_dssp -------------------
T ss_pred HHHHHHHHHHhcc-hhcce
Confidence 4556777777887 56555
No 297
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=71.40 E-value=17 Score=35.27 Aligned_cols=80 Identities=10% Similarity=0.160 Sum_probs=53.2
Q ss_pred hhhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhcC--cchhhh
Q 018388 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL-GTLVMMPVIGNLSDQYG--RKAMLT 85 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~-~~~i~~~~~G~l~dr~G--rk~~l~ 85 (357)
.+....++..+......-+...+|.|+|. +++.+.+.+..+.+...+ +..+|..+.|.+..|+. .|....
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~-------Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~ 465 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLET-------QFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAK 465 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHH-------HcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHH
Confidence 45556777777777788888899999986 556666666666654444 44566778899999874 355555
Q ss_pred HHHHHHHHHH
Q 018388 86 LPLTLSIIPL 95 (357)
Q Consensus 86 ~~~~~~~~~~ 95 (357)
+.++...+..
T Consensus 466 ~~~~~~~l~l 475 (735)
T KOG3626|consen 466 FVIVCSVLSL 475 (735)
T ss_pred HHHHHHHHHH
Confidence 5444444443
No 298
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=70.40 E-value=97 Score=29.19 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccc
Q 018388 288 MLIAGLAGTISQLLFMPLLAPILG 311 (357)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~ 311 (357)
...+.+.+.+++ ..++++-+.++
T Consensus 303 i~~y~~~~~iaG-y~S~~~yk~~~ 325 (521)
T PF02990_consen 303 IILYALTSFIAG-YVSARLYKSFG 325 (521)
T ss_pred HHHHHHHhhHHH-HHHHHHHHHcC
Confidence 334444444444 55555555554
No 299
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=68.50 E-value=19 Score=32.12 Aligned_cols=83 Identities=12% Similarity=0.091 Sum_probs=47.1
Q ss_pred ccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhh-----ccchhHHHH-H
Q 018388 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP-----ILGEAKLLS-L 318 (357)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~-~ 318 (357)
++++..+...+..++...+... .+|..++.. |.|-.+.+.+...+.--. -- ++...+.| |+|||+..+ -
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak-~vSyt~~a~fS~ay~P~s--LK-llWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAK-GVSYTSQAIFSFAYWPFS--LK-LLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCC-CcchhhhhhhhhhhhHHH--HH-HHHHhhhHHHHHHhhccccceeee
Confidence 4556666667777766666555 889888865 777666555443332111 12 33344555 999987643 3
Q ss_pred HHHHHHHHHHHHHh
Q 018388 319 GLFAACINMFICSI 332 (357)
Q Consensus 319 ~~~~~~i~~~~~~~ 332 (357)
+..+.+..+.+++.
T Consensus 105 ~q~llG~~mllLs~ 118 (510)
T KOG3574|consen 105 CQYLLGLFMLLLSY 118 (510)
T ss_pred hHHHHHHHHHHHhh
Confidence 33444444444444
No 300
>PRK03612 spermidine synthase; Provisional
Probab=60.64 E-value=1e+02 Score=29.02 Aligned_cols=58 Identities=10% Similarity=-0.018 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018388 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI 309 (357)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (357)
..+..++.+++...+.....-.+...+|-+....+.+.+.+..+..+++ .+++++.++
T Consensus 19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs-~l~~~~~~~ 76 (521)
T PRK03612 19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGA-LLSKYLLRD 76 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-HHHHhhhhh
Confidence 4445555666666666666777777778888888888888888888887 666666543
No 301
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=59.19 E-value=26 Score=24.55 Aligned_cols=51 Identities=12% Similarity=0.075 Sum_probs=38.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhc
Q 018388 282 NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 333 (357)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 333 (357)
...|-.++.++...++.+ ++.++..|+..+.+.=.+|..++.++..++.+.
T Consensus 54 ~~fGRvYAAYGGvfI~~S-l~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVAS-LLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHH-HHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 445888899998888888 888999999887766667777776665554443
No 302
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=59.10 E-value=81 Score=30.11 Aligned_cols=80 Identities=16% Similarity=0.198 Sum_probs=56.4
Q ss_pred HHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhh-ccchhHHHHHHHHHHHHHHHH
Q 018388 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP-ILGEAKLLSLGLFAACINMFI 329 (357)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~i~~~~ 329 (357)
.+....+...+..+....+-.|+.+.++.+...+.......+....... +++++++| ..||-+++.++..+...+..+
T Consensus 42 il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~-l~g~~laD~f~gry~tI~~~s~i~~~G~~~ 120 (571)
T KOG1237|consen 42 ILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLP-LLGAFLADSFLGRYFTINIGSLISLLGLFG 120 (571)
T ss_pred HHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 4444445555666666777778888888888777776666666666655 78899999 467878888888887777554
Q ss_pred HH
Q 018388 330 CS 331 (357)
Q Consensus 330 ~~ 331 (357)
+.
T Consensus 121 lt 122 (571)
T KOG1237|consen 121 LT 122 (571)
T ss_pred HH
Confidence 43
No 303
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=58.64 E-value=72 Score=28.30 Aligned_cols=91 Identities=14% Similarity=0.169 Sum_probs=61.8
Q ss_pred hhHHHHHHHHHHHHHHhhHhhHHHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHH
Q 018388 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~ 89 (357)
...+.++..+..+|.+.+-|-++.+..|..++++ +...+. ...+....-.+|..++....+++-|++|....+.++.+
T Consensus 33 ~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~-~~~~~~-~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~ 110 (372)
T PF00854_consen 33 LGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD-DSRRDS-FFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAI 110 (372)
T ss_dssp -CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT-TTHHHH-HHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccccHHHHHHHHhcccc-hhhhhh-hHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHH
Confidence 3456677777888999999999999988655442 222222 22455555588888888888999988888777777777
Q ss_pred HHHHHHHHHHHcc
Q 018388 90 LSIIPLAILAYRR 102 (357)
Q Consensus 90 ~~~~~~~~~~~~~ 102 (357)
...++.+.+....
T Consensus 111 ~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 111 GMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhCC
Confidence 6666665555443
No 304
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=57.18 E-value=1.6e+02 Score=27.06 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=25.7
Q ss_pred CccchhHHHHHHHHHHHHHHHhhHhhhHHhhh
Q 018388 138 SERQRASAFGILLGVLSASFVCGTLAARFLST 169 (357)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 169 (357)
.+++.+...++.+.+.+.|...-|+..|..|.
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~~Gf 49 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGL 49 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhcchH
Confidence 45667788999999999999999988877553
No 305
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=55.92 E-value=1.4e+02 Score=26.36 Aligned_cols=25 Identities=36% Similarity=0.678 Sum_probs=18.7
Q ss_pred HHHhhhhhccchhHHHHHHHHHHHH
Q 018388 301 LFMPLLAPILGEAKLLSLGLFAACI 325 (357)
Q Consensus 301 ~~~~~l~~~~~~~~~~~~~~~~~~i 325 (357)
++.+.+++++|.|+++..+......
T Consensus 76 m~~~~~Ir~~g~K~tm~lav~~Y~l 100 (390)
T KOG3097|consen 76 MFMPLLIRFLGTKWTMVLAVFPYAL 100 (390)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4556888999999998877665543
No 306
>PRK11588 hypothetical protein; Provisional
Probab=53.81 E-value=1.9e+02 Score=27.04 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=17.9
Q ss_pred hhhhhhhcCcchhhhHH--HHHHHHHHHHHHHccc
Q 018388 71 IGNLSDQYGRKAMLTLP--LTLSIIPLAILAYRRS 103 (357)
Q Consensus 71 ~G~l~dr~Grk~~l~~~--~~~~~~~~~~~~~~~~ 103 (357)
.+++.+|++.|..+++. .++++++....+.+..
T Consensus 136 i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee 170 (506)
T PRK11588 136 ILALIRKTRGNEILFIPVLFILFSLGGAVFGMGEE 170 (506)
T ss_pred HHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHH
Confidence 36778888776544443 3344444444454443
No 307
>PRK02237 hypothetical protein; Provisional
Probab=52.58 E-value=51 Score=23.20 Aligned_cols=50 Identities=10% Similarity=0.046 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhc
Q 018388 283 QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 333 (357)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 333 (357)
+.|-.+..++...++.+ ++.++..|+..+-+-=.+|..++.++..++.+.
T Consensus 57 ~~GRvYAAYGGvyI~~S-l~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGS-LLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhHHHHhhhHHHHHH-HHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 36888999999888888 888999999887666666776666665554443
No 308
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=51.53 E-value=1.8e+02 Score=25.93 Aligned_cols=83 Identities=13% Similarity=0.058 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHH----HHHH-HHccc-hhHHHHHHHHHHHhhhcccchH
Q 018388 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIP----LAIL-AYRRS-ISFFYAYYALRTLTAMVCEGSI 125 (357)
Q Consensus 52 ~~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~----~~~~-~~~~~-~~~~~~~~~~r~l~G~~~~~~~ 125 (357)
+.+++.+.|-..+.+++...-++.|.--.-+.+..-.++..++ .+++ .++.+ ...-+.+++..+..|. -.|..
T Consensus 44 q~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~-LVG~E 122 (508)
T COG4262 44 QTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV-LVGAE 122 (508)
T ss_pred ehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH-HHhcc
Confidence 3366666677777777777777766433322222211111111 1111 23322 1125777888888888 66778
Q ss_pred HHHHHHHHhh
Q 018388 126 NCLALAYVAD 135 (357)
Q Consensus 126 ~~~~~~~i~~ 135 (357)
.|..+.++..
T Consensus 123 iPL~mrml~~ 132 (508)
T COG4262 123 IPLLMRMLQR 132 (508)
T ss_pred hHHHHHHHHH
Confidence 7888888776
No 309
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=46.91 E-value=1.5e+02 Score=23.85 Aligned_cols=49 Identities=10% Similarity=0.110 Sum_probs=25.0
Q ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHhhhhhc--cchhHHHHHHHHHHHHHH
Q 018388 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPI--LGEAKLLSLGLFAACINM 327 (357)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~i~~ 327 (357)
|.+...........+......+..++.++.++ .+++. ++.|.++..++.
T Consensus 153 g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~~~~g~~a-~igGliLI~iG~ 203 (206)
T TIGR02840 153 GLNPLATSILVAVMSFIFVSLGLFLGKKISKKSIIGKFS-FLSGILLILLGV 203 (206)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchH-HHHHHHHHHHHH
Confidence 44444444444555544444443444444444 35554 666666666553
No 310
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=45.36 E-value=2.4e+02 Score=25.71 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=18.4
Q ss_pred cchHHHHHHHHHhhCCCccc--hhHHHHHHHHHHH
Q 018388 122 EGSINCLALAYVADNISERQ--RASAFGILLGVLS 154 (357)
Q Consensus 122 ~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~ 154 (357)
.+..+....++..+.+|+.+ |+..++.....+-
T Consensus 175 tg~~~~avaalf~qL~~~a~~t~g~~f~llG~afl 209 (536)
T COG3559 175 TGMVFTAVAALFAQLSPSARFTRGVAFALLGTAFL 209 (536)
T ss_pred HHHHHHHHHHHHHHhCccccccchhHHHHHHHHHH
Confidence 34555666677778877554 3344444444443
No 311
>TIGR00814 stp serine transporter. The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.
Probab=45.15 E-value=2.4e+02 Score=25.56 Aligned_cols=34 Identities=9% Similarity=0.048 Sum_probs=26.9
Q ss_pred CccchhHHHHHHHHHHHHHHHhhHhhhHHhhhHH
Q 018388 138 SERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171 (357)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 171 (357)
.++|.+....+.+...+.|...-|..++.-||-.
T Consensus 2 ~~~d~~w~~~l~gt~IGaGiL~LP~~ag~~G~i~ 35 (397)
T TIGR00814 2 TKTDTGWMLGLYGTAIGAGVLFLPIQAGLGGLWV 35 (397)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 3567888899999999999998898876666543
No 312
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=44.11 E-value=1.6e+02 Score=24.82 Aligned_cols=103 Identities=13% Similarity=0.146 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhh-cCcchhhh----HHHHHHHHHHHHH-HHccc-hhHHHHHHHHHHHhhhcccchHH
Q 018388 54 GFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLT----LPLTLSIIPLAIL-AYRRS-ISFFYAYYALRTLTAMVCEGSIN 126 (357)
Q Consensus 54 g~~~~~~~~~~~i~~~~~G~l~dr-~Grk~~l~----~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~r~l~G~~~~~~~~ 126 (357)
....-++..+..++....|.+... +.||+.+. .+.+...+..+.. ...++ ......+++.-++.|.+.-| .+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~Wg-iQ 222 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWG-IQ 222 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHh-hh
Confidence 334445566666777777888774 45555444 2233344433332 12222 11256677888888873322 22
Q ss_pred HHHHHHHhhCCCccchhHHHHHHHHHHHHHHH
Q 018388 127 CLALAYVADNISERQRASAFGILLGVLSASFV 158 (357)
Q Consensus 127 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 158 (357)
++. -.+.+-.++.++.+.--..+..+++|.+
T Consensus 223 ~Vi-L~lPhEyK~~~pk~ig~~Fg~iWGfGY~ 253 (267)
T PF07672_consen 223 GVI-LNLPHEYKGYNPKKIGIQFGLIWGFGYI 253 (267)
T ss_pred HHH-hcChhhhcCCCcceehhHHHHHHHHHHH
Confidence 222 2223333333444444445556666643
No 313
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=41.77 E-value=77 Score=18.98 Aligned_cols=33 Identities=21% Similarity=0.192 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhhhhhhh-cCcchhhhHHHHHHHH
Q 018388 61 GLGTLVMMPVIGNLSDQ-YGRKAMLTLPLTLSII 93 (357)
Q Consensus 61 ~~~~~i~~~~~G~l~dr-~Grk~~l~~~~~~~~~ 93 (357)
.+...+.....|+..|+ +|.++...+..++..+
T Consensus 10 ~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 10 MAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 44455566678888886 5766665554444433
No 314
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=41.43 E-value=1e+02 Score=24.33 Aligned_cols=21 Identities=19% Similarity=0.358 Sum_probs=17.4
Q ss_pred HHHHHHHHHHhhhhhhhhcCc
Q 018388 60 IGLGTLVMMPVIGNLSDQYGR 80 (357)
Q Consensus 60 ~~~~~~i~~~~~G~l~dr~Gr 80 (357)
|-++..+.+.+.|++.||..+
T Consensus 91 yL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 91 YLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred HHHHHHHHHHHHHHHHHhhhc
Confidence 477778888889999999875
No 315
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=40.52 E-value=94 Score=23.63 Aligned_cols=48 Identities=6% Similarity=0.024 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHH
Q 018388 107 FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFV 158 (357)
Q Consensus 107 ~~~~~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 158 (357)
+..++..-.+.|+ |.. ..++..++...++++-|..+|+-.+--+++-+
T Consensus 97 ~~~~~~S~~~Fg~---gll-GisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 97 WAVLLVSLVFFGL---GLL-GISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred hHHHHHHHHHHHH---HHH-hhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 4455555555555 233 56777888788888899999998888777644
No 316
>PRK11469 hypothetical protein; Provisional
Probab=38.69 E-value=2e+02 Score=22.82 Aligned_cols=53 Identities=19% Similarity=0.113 Sum_probs=31.7
Q ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHH
Q 018388 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (357)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 330 (357)
|.+...........+......+..++.++.+++++|.-+..|.++..++.-.+
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334444444444445453455556677788777888888888876544
No 317
>COG3619 Predicted membrane protein [Function unknown]
Probab=36.87 E-value=2.4e+02 Score=23.20 Aligned_cols=27 Identities=7% Similarity=0.030 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhcCcc
Q 018388 54 GFQQAIIGLGTLVMMPVIGNLSDQYGRK 81 (357)
Q Consensus 54 g~~~~~~~~~~~i~~~~~G~l~dr~Grk 81 (357)
........+...++.. .+.+..|..+|
T Consensus 58 a~~~~~pii~Fv~Gv~-~~~~~~r~~~~ 84 (226)
T COG3619 58 AVLLLLPILAFVLGVA-AAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHhcc
Confidence 4444444555555544 44444444443
No 318
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=36.77 E-value=75 Score=22.35 Aligned_cols=48 Identities=19% Similarity=0.140 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHc
Q 018388 54 GFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101 (357)
Q Consensus 54 g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~ 101 (357)
|=+.+.|.-.+.+.++.+++..|+.-+-+-=.++..+..++..+..+.
T Consensus 57 GRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 57 GRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 667778888899999999999999988777677776666665554443
No 319
>PRK02237 hypothetical protein; Provisional
Probab=36.11 E-value=1e+02 Score=21.78 Aligned_cols=49 Identities=12% Similarity=0.005 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHc
Q 018388 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101 (357)
Q Consensus 53 ~g~~~~~~~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~ 101 (357)
.|=+.+.|.-.+.+.++.+++..|+.-+-+-=.++..+..++..+..+.
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 3777788888899999999999999987776666666666665554443
No 320
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=34.78 E-value=3.7e+02 Score=24.78 Aligned_cols=64 Identities=11% Similarity=-0.032 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHH
Q 018388 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (357)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (357)
+...+.......+..+++.++.-..... + +...........++...+.. +++-+...++.|-..
T Consensus 97 ~l~sll~~~~~iGW~~v~~~l~~~a~~~-~-~~~~~~~~ili~g~l~~l~~-ifG~r~l~~l~~~a~ 160 (442)
T COG1457 97 ILPSLLNGITLIGWFGVNVILSGIAIGS-G-TGLPVWAGILIIGVLMTLVT-IFGYRALHKLERIAV 160 (442)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcccccc-C-CCCcHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHH
Confidence 3344444444556666665554443111 2 33333555555555555555 666666666655333
No 321
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=34.76 E-value=1.8e+02 Score=23.62 Aligned_cols=46 Identities=13% Similarity=0.067 Sum_probs=26.3
Q ss_pred HHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHH
Q 018388 301 LFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFS 346 (357)
Q Consensus 301 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 346 (357)
.+..++.||+.+--+-..|+....++.-+...+++........+.|
T Consensus 21 l~~~klper~k~~l~~~~Gl~~l~iGI~m~~~~~n~~~~ilslv~G 66 (228)
T COG1811 21 LIGKKLPERIKDILMQCLGLAILGIGIKMALQAKNDIMILLALVIG 66 (228)
T ss_pred HHcccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHH
Confidence 3444455555444455666666666766665666666555555444
No 322
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=34.64 E-value=1.3e+02 Score=20.21 Aligned_cols=20 Identities=5% Similarity=0.120 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 018388 170 TSAFQAATIVSMLAAAYMRV 189 (357)
Q Consensus 170 ~~~f~~~~~~~~~~~~~~~~ 189 (357)
|+-.++.+++-+++++.+.+
T Consensus 23 RYGLf~GAIFQliCilAiI~ 42 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAIIL 42 (85)
T ss_pred HHHHHHHHHHHHHHHHheee
Confidence 55555555655554444333
No 323
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=33.29 E-value=78 Score=26.71 Aligned_cols=60 Identities=20% Similarity=0.236 Sum_probs=40.4
Q ss_pred HHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhh---------hhhccchhHH
Q 018388 254 VAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPL---------LAPILGEAKL 315 (357)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~~~~~~~~ 315 (357)
.-+..-.......+++-.|+++. |.++...+.++....+.-.+.. ++.|. -.||+|||+.
T Consensus 25 GHmlNDitAScWFTYlllfltqi-glsp~~~AmlML~GQVtda~st-~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 25 GHMLNDITASCWFTYLLLFLTQI-GLSPSSRAMLMLIGQVTDAIST-PFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred hHHHhhHHHHHHHHHHHHHHHHh-cCCcchhHHHHHhhHHHHHHhc-ccccccccccccHHHhhhhcceee
Confidence 33444444555677777888887 8999888877777777666666 44443 3478888764
No 324
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=32.74 E-value=1e+02 Score=21.28 Aligned_cols=21 Identities=38% Similarity=0.420 Sum_probs=14.3
Q ss_pred HHHHHHHHHhhhhhhhhcCcc
Q 018388 61 GLGTLVMMPVIGNLSDQYGRK 81 (357)
Q Consensus 61 ~~~~~i~~~~~G~l~dr~Grk 81 (357)
.....+.+.+.|.+.||..||
T Consensus 85 ~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 85 FAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHhhC
Confidence 555667778899999998776
No 325
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=32.72 E-value=1.2e+02 Score=24.89 Aligned_cols=53 Identities=17% Similarity=0.129 Sum_probs=35.5
Q ss_pred HHHHHhhhcccchHHHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHhhHhhhHH
Q 018388 112 ALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (357)
Q Consensus 112 ~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (357)
....-.|+ +++..++++..-+.+.+| +......++-..++-+....|-.+.-+
T Consensus 176 ALAMasGv-GSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~if 228 (241)
T PF11299_consen 176 ALAMASGV-GSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIF 228 (241)
T ss_pred HHHHHcCC-cHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455688 666666777777888887 566677777777777776666544433
No 326
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=32.31 E-value=1.4e+02 Score=19.00 Aligned_cols=33 Identities=12% Similarity=0.216 Sum_probs=16.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 018388 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD 200 (357)
Q Consensus 168 ~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~ 200 (357)
+|-..+.+...+.++..-.+-..+||..+..+.
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe~s~~aP~ 61 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPERSRQAPD 61 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTTTCSS-SS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCchhcccCCC
Confidence 344444444444344444445678887655443
No 327
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=31.72 E-value=1.9e+02 Score=20.46 Aligned_cols=35 Identities=11% Similarity=0.074 Sum_probs=24.7
Q ss_pred hhcccchHHHHHHHHHHHHhhhhhhHHHHHhhhhh
Q 018388 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ 276 (357)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (357)
+.+.+.+.+..+....+.++++....+..+++.+.
T Consensus 45 l~~~~Fi~Rt~~FIlicAFGYGll~v~~tP~l~~~ 79 (106)
T PF11872_consen 45 LSGYHFILRTLAFILICAFGYGLLIVWLTPLLARQ 79 (106)
T ss_pred hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455666666667777788888888888777654
No 328
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=30.83 E-value=2.3e+02 Score=21.42 Aligned_cols=23 Identities=26% Similarity=0.323 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhhhhhhhhcCcch
Q 018388 60 IGLGTLVMMPVIGNLSDQYGRKA 82 (357)
Q Consensus 60 ~~~~~~i~~~~~G~l~dr~Grk~ 82 (357)
|-++..+.+.+.|++.||..+++
T Consensus 62 yl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 62 YLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred HHHHHHHHHHHHHHHHHhccccc
Confidence 47778888899999999988864
No 329
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=30.70 E-value=4.1e+02 Score=24.11 Aligned_cols=73 Identities=10% Similarity=-0.069 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHH
Q 018388 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (357)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (357)
..+.+..++.....-....-...|+.+..|-|....+..-.+-+....+.+ .+.|...|+..|+|++...+.+
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg-~ivGq~vDg~sr~Kvi~~~L~l 102 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLG-PIVGQWVDGMSRVKVIQTWLLL 102 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhH-HHHHHHhcchhHHHHHHHHHhh
Confidence 344555555555555666666777777766555555555555555555656 3446678999988876554443
No 330
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=28.69 E-value=3.3e+02 Score=22.33 Aligned_cols=14 Identities=21% Similarity=0.280 Sum_probs=8.6
Q ss_pred HhhhhhhHHHHHhh
Q 018388 260 LSEGGMQASFLYFL 273 (357)
Q Consensus 260 ~~~~~~~~~~~~~~ 273 (357)
+...+..+.+|.++
T Consensus 145 f~~ggliPLlp~~~ 158 (225)
T cd02434 145 FLVFGIIPLLPYLL 158 (225)
T ss_pred HHHHHHHHHHHHHH
Confidence 45556677777654
No 331
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=28.35 E-value=4.9e+02 Score=24.26 Aligned_cols=66 Identities=9% Similarity=-0.046 Sum_probs=41.1
Q ss_pred HHHHhhhcccchHHHHHHHHHhhCCC-ccchhHHHHHHHHHHHHHHHhhHhhhHH----hhhHHHHHHHHHH
Q 018388 113 LRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIV 179 (357)
Q Consensus 113 ~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~----l~~~~~f~~~~~~ 179 (357)
.-++.|+ ........--..+.+..| +++|+..+|-.+...++..++..++++. .||.....+.-++
T Consensus 272 ~vi~y~~-~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii 342 (472)
T TIGR00769 272 LVIAYGI-SINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLV 342 (472)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3344455 434444455566777776 5678888998888777776555555444 3887665555444
No 332
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=26.75 E-value=3.3e+02 Score=21.75 Aligned_cols=23 Identities=17% Similarity=0.121 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHhhHhhhHHhhh
Q 018388 147 GILLGVLSASFVCGTLAARFLST 169 (357)
Q Consensus 147 ~~~~~~~~~g~~~g~~~~~~l~~ 169 (357)
...-.+..+|.++|..+...++.
T Consensus 169 ~~~i~~f~~Ga~~ga~l~~~~~~ 191 (209)
T PF06912_consen 169 LLIILSFFIGAILGALLYRRLGF 191 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 33344444455555444444454
No 333
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=26.53 E-value=3e+02 Score=22.61 Aligned_cols=46 Identities=11% Similarity=0.146 Sum_probs=22.8
Q ss_pred HHHhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHH
Q 018388 301 LFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFS 346 (357)
Q Consensus 301 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 346 (357)
.+..++.||+.+.-....+.....++.-...-.++....+....+|
T Consensus 20 ~~~~~i~~~~~~~l~~~~Gl~~l~iGi~~~~~~~~~~~vi~slvlG 65 (226)
T PF04474_consen 20 LLGRRIPERIKDTLMQALGLCVLAIGISMALKGQNPLLVILSLVLG 65 (226)
T ss_pred HHcCCCCHHHHHHHHHHhhHHHHHHHHHHHHccCccHHHHHHHHHH
Confidence 4444455555444455566666666654443344444444444444
No 334
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=25.94 E-value=31 Score=25.34 Aligned_cols=16 Identities=25% Similarity=0.154 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHH
Q 018388 170 TSAFQAATIVSMLAAA 185 (357)
Q Consensus 170 ~~~f~~~~~~~~~~~~ 185 (357)
||++++..++.+++++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 4555555444333333
No 335
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=25.77 E-value=2.2e+02 Score=19.34 Aligned_cols=65 Identities=3% Similarity=-0.197 Sum_probs=36.2
Q ss_pred ccchHHHHHHHHHHHHhhhhhhHHHHHhhhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018388 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI 309 (357)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (357)
++..+.+....+...+++.....+.|..+.....-+....|+......+........+..+..+|
T Consensus 15 ~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~~~~~~~~l~~~Yv~~An~ 79 (91)
T PF04341_consen 15 RRLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGLGQIVFAWVLTWLYVRRANR 79 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 34455566666666677777778888777665442345556666555544333332333333443
No 336
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=25.12 E-value=5e+02 Score=23.25 Aligned_cols=35 Identities=17% Similarity=0.215 Sum_probs=23.6
Q ss_pred hCCCccchhHHHHHH-HHHHHHHHHhhHhhhHHhhhH
Q 018388 135 DNISERQRASAFGIL-LGVLSASFVCGTLAARFLSTT 170 (357)
Q Consensus 135 ~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~ 170 (357)
|.+| .+|-+..+.. ....+.|.++||.++..+||-
T Consensus 48 DYvP-~~~~vlfghhf~sIAGaGPI~GPi~aa~~Gwl 83 (376)
T PF02554_consen 48 DYVP-TNKWVLFGHHFASIAGAGPIVGPILAAQFGWL 83 (376)
T ss_pred CCCC-CchHHhhHHHHHHHhccccchHHHHHHHhcch
Confidence 4444 3444566654 344477789999999888996
No 337
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=24.70 E-value=1.8e+02 Score=18.04 Aligned_cols=26 Identities=15% Similarity=0.211 Sum_probs=14.2
Q ss_pred HHHHHHHHHH---HHHHHHHHHHhccCCC
Q 018388 170 TSAFQAATIV---SMLAAAYMRVFLKDDV 195 (357)
Q Consensus 170 ~~~f~~~~~~---~~~~~~~~~~~~~e~~ 195 (357)
|..|.+...+ .++.-+..++.+|+.+
T Consensus 32 Rl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 32 RLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 6666655443 2333344566778765
No 338
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=24.21 E-value=3.6e+02 Score=21.26 Aligned_cols=25 Identities=20% Similarity=0.195 Sum_probs=17.9
Q ss_pred hHHHHHHHHHhhCCCccchhHHHHH
Q 018388 124 SINCLALAYVADNISERQRASAFGI 148 (357)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~ 148 (357)
.-.....+.+.+..|+++|.++.-+
T Consensus 12 ~DN~~vi~~~~~~lp~~~r~kal~~ 36 (183)
T PF03741_consen 12 IDNAFVIAMIFRKLPPEQRRKALFW 36 (183)
T ss_pred hhHHHHHHHHHhCCCHHHhhhhHHH
Confidence 3456677888888998888776543
No 339
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=24.13 E-value=3.7e+02 Score=21.35 Aligned_cols=31 Identities=35% Similarity=0.140 Sum_probs=17.2
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 018388 279 FNKNQFADLMLIAGLAGTISQLLFMPLLAPIL 310 (357)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 310 (357)
-|+.+-..++..++++..... +..+...++.
T Consensus 147 ~s~~~G~l~m~~FgLGT~p~l-l~~~~~~~~l 177 (199)
T PF13386_consen 147 GSPLYGALLMLAFGLGTLPAL-LLAGLLAGKL 177 (199)
T ss_pred CChHHHHHHHHHHHHhHHHHH-HHHHHHHHHH
Confidence 355565666667777665544 4445444433
No 340
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=23.67 E-value=1.5e+02 Score=20.86 Aligned_cols=29 Identities=10% Similarity=-0.026 Sum_probs=20.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCC
Q 018388 167 LSTTSAFQAATIVSMLAAAYMRVFLKDDV 195 (357)
Q Consensus 167 l~~~~~f~~~~~~~~~~~~~~~~~~~e~~ 195 (357)
.+|+.++++...++++...+.+.+.||..
T Consensus 57 e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 57 EGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 47888888876666666666666667654
No 341
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=23.60 E-value=4.7e+02 Score=22.42 Aligned_cols=45 Identities=18% Similarity=0.167 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHH
Q 018388 283 QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (357)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 330 (357)
+++.-+.+.-..+++.+ .+ ++-||++|-..+.++....++..-..
T Consensus 100 eaSLGY~InPL~~VllG-~l--flkErls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 100 EASLGYFINPLVNVLLG-RL--FLKERLSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HHHhHHHHHHHHHHHHH-HH--HHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444 22 45689888777666666655554433
No 342
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=23.41 E-value=3.2e+02 Score=20.40 Aligned_cols=25 Identities=16% Similarity=-0.028 Sum_probs=18.6
Q ss_pred HHhhCCCccchhHHHHHHHHHHHHH
Q 018388 132 YVADNISERQRASAFGILLGVLSAS 156 (357)
Q Consensus 132 ~i~~~~~~~~r~~~~~~~~~~~~~g 156 (357)
-+.|++|+..|....+..+......
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~ 83 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAV 83 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHH
Confidence 3579999999998877776555443
No 343
>COG1983 PspC Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]
Probab=22.71 E-value=2.2e+02 Score=18.33 Aligned_cols=17 Identities=6% Similarity=0.182 Sum_probs=9.4
Q ss_pred HHHHHHHHHhccCCCCC
Q 018388 181 MLAAAYMRVFLKDDVPN 197 (357)
Q Consensus 181 ~~~~~~~~~~~~e~~~~ 197 (357)
++.-++.++.+|+.+..
T Consensus 50 ii~Yiia~~imP~~~~~ 66 (70)
T COG1983 50 IIAYIIAALIMPSEEDE 66 (70)
T ss_pred HHHHHHHHHHCCCCccc
Confidence 33345556677765543
No 344
>PF04964 Flp_Fap: Flp/Fap pilin component; InterPro: IPR007047 This entry is for the fimbriae associated protein Flp/Fap pilin component.
Probab=22.49 E-value=1.1e+02 Score=17.64 Aligned_cols=37 Identities=11% Similarity=0.012 Sum_probs=20.0
Q ss_pred hhhhcccCcchHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018388 273 LKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI 309 (357)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (357)
.+++-|-+..+++++.....+..+....-+...+.++
T Consensus 2 ~~de~GaTaiEYali~alia~~ii~~~~~~g~~~~~~ 38 (46)
T PF04964_consen 2 LRDERGATAIEYALIAALIAVAIIAAVTNLGTALNTA 38 (46)
T ss_pred CcccccchHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 3455577777777776666555444332333333333
No 345
>COG4769 Predicted membrane protein [Function unknown]
Probab=20.96 E-value=1.9e+02 Score=22.28 Aligned_cols=50 Identities=12% Similarity=0.163 Sum_probs=28.8
Q ss_pred HHHHHHHHHhhhhhhhhcCcchhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHhhh
Q 018388 61 GLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAM 119 (357)
Q Consensus 61 ~~~~~i~~~~~G~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 119 (357)
+....+.+...-++..++|+|..-.++.-. .-++.+| ..++.+.+++.+-
T Consensus 83 sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hN---l~QLivas~Lv~~ 132 (181)
T COG4769 83 SFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHN---LGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHh---HHHHHHHHHHHhc
Confidence 344445555566777788888764433321 2334566 6666777766553
No 346
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=20.74 E-value=1.9e+02 Score=16.86 Aligned_cols=34 Identities=6% Similarity=0.081 Sum_probs=15.8
Q ss_pred HHHHhhHhhhHHhhh----HHHHHHHHHHHHHHHHHHH
Q 018388 155 ASFVCGTLAARFLST----TSAFQAATIVSMLAAAYMR 188 (357)
Q Consensus 155 ~g~~~g~~~~~~l~~----~~~f~~~~~~~~~~~~~~~ 188 (357)
+|..+|..+.+.++. .+.-++.+++..+.++..+
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~ 43 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIY 43 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 455555555555533 3444444455444444333
No 347
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=20.46 E-value=3.6e+02 Score=21.57 Aligned_cols=29 Identities=38% Similarity=0.517 Sum_probs=22.4
Q ss_pred ccchhHHHHHHHHHHHHHHHhhHhhhHHh
Q 018388 139 ERQRASAFGILLGVLSASFVCGTLAARFL 167 (357)
Q Consensus 139 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (357)
.++.+++.++.-.+..+|.++|..+..++
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l 164 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWL 164 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45667888888888888888888877665
Done!