BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018389
(357 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224099809|ref|XP_002311628.1| predicted protein [Populus trichocarpa]
gi|222851448|gb|EEE88995.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/344 (62%), Positives = 257/344 (74%), Gaps = 27/344 (7%)
Query: 20 VNSHFVSRVTSYCSRAS------NDFIEENERPTSSRSYSSRTNLSPLLSSKGPHFGGYN 73
++SHF+SRV+S+CS+AS N+ E+ S SYSS+ + SPLL P+ GYN
Sbjct: 16 LSSHFLSRVSSFCSKASTTIDKANETTEQASLQERSTSYSSKIHFSPLLGDSRPNLDGYN 75
Query: 74 VELVDDETWQVSAGLAHAWRGLDEDKEAKSDVNVVDDD-DDATSFEGDSDFDEIDNMRIR 132
+ELVDD+ WQVS+ L HAWRGLD +KEAKS + + DD S +G+ DFDEIDNMRIR
Sbjct: 76 IELVDDDAWQVSSSLVHAWRGLDREKEAKSVIEAFGEQFDDVKSLQGNPDFDEIDNMRIR 135
Query: 133 GDLFYKLDKDSKEFEEYSFDFHRRKSSKTKEGNKDSEKKEASKAKTDKKECQKKEALKRK 192
G+LFYKLD+DSKEFEEYSFDFHR+ S + K+ K +EKKE+SK +
Sbjct: 136 GNLFYKLDRDSKEFEEYSFDFHRKNSWRRKDDPKGNEKKESSK---------------KN 180
Query: 193 SDAKESKRKESPRPNLASRDDEFNKIVMSDDNV---EKRVRTPTFNQLTAPYHEPFCLDI 249
+KESKRKE+ N A D + + D + +K++RTPTFNQLT PYHEPFCLDI
Sbjct: 181 ESSKESKRKENRSCNSAF--DVYTLVSNMDSSGGAEKKKIRTPTFNQLTGPYHEPFCLDI 238
Query: 250 YISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIH 309
YISKASVRAC++HRVTSKVV VAHSISKD KFDL ST+NATACAAVGGILAQRALADDIH
Sbjct: 239 YISKASVRACVIHRVTSKVVAVAHSISKDFKFDLASTKNATACAAVGGILAQRALADDIH 298
Query: 310 DVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKLKQRKQKKASY 353
DVVYTPRKGE+LEGKLQIVLQAIIDNG+NVKVKLKQRK KA +
Sbjct: 299 DVVYTPRKGERLEGKLQIVLQAIIDNGINVKVKLKQRKPSKARF 342
>gi|225432670|ref|XP_002278526.1| PREDICTED: uncharacterized protein LOC100249372 [Vitis vinifera]
gi|297737055|emb|CBI26256.3| unnamed protein product [Vitis vinifera]
Length = 348
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 203/363 (55%), Positives = 245/363 (67%), Gaps = 32/363 (8%)
Query: 3 MTITFLQRSTTTLRSLVVNSHFVSRVTSYCSRASNDFIEENE---------RPTSSRSYS 53
M L+R T+ S + NSHF+S ++C R S +E E R S +YS
Sbjct: 1 MAFVLLRRRITS--SSITNSHFLSGARNFCLRVSTFLDKEKEATQSALDDNRKMSWGNYS 58
Query: 54 SRTNLSPLLSSKGPHFGGYNVELVDDETWQVSAGLAHAWR-GLDEDKEAKSDVNVVDDDD 112
S +L L S G + GY++ELVD +TW+VS+GLA AWR G + K V+ +
Sbjct: 59 SEIHLPSLYSHGGLYPDGYDIELVDPDTWRVSSGLAQAWRDGPSGRRVVKGAVD--EQIH 116
Query: 113 DATSFEGDSDFDEIDNMRIRGDLFYKLDKDSKEFEEYSFDFHRRKSSKTKEGNKDSEKKE 172
++ SFE D DFDEI++MRI G LFYKLD+DSKEFEEY+ DFHR+KSSK K K+S+K+
Sbjct: 117 ESPSFEADLDFDEIEDMRIYGSLFYKLDRDSKEFEEYNLDFHRKKSSKNKGDKKESKKEN 176
Query: 173 ASKAKTDKKECQKKEALKRKSDAKESKRKESPRPNLASRDDEFNKIVMSDDNVEKRVRTP 232
++ + ++ K + + D L RD VEK++RTP
Sbjct: 177 PTQNSPNSEKLPKLPKVVKSKDHIFL---------LDGRDSSL---------VEKKLRTP 218
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
TFNQLTAPYHEPFCLDI+ISK SVRACI+HRVTSKVV VAHSISKDMKFDL STRN TAC
Sbjct: 219 TFNQLTAPYHEPFCLDIFISKGSVRACIIHRVTSKVVAVAHSISKDMKFDLTSTRNVTAC 278
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKLKQRKQKKAS 352
AAVG ILAQRALADDIHD VYTPRKG+KLEGKLQIVLQ+IIDNGVNVKVKLKQRK KKAS
Sbjct: 279 AAVGRILAQRALADDIHDTVYTPRKGDKLEGKLQIVLQSIIDNGVNVKVKLKQRKTKKAS 338
Query: 353 YRP 355
+ P
Sbjct: 339 HLP 341
>gi|356540329|ref|XP_003538642.1| PREDICTED: uncharacterized protein LOC100802391 [Glycine max]
Length = 329
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 176/329 (53%), Positives = 218/329 (66%), Gaps = 22/329 (6%)
Query: 23 HFVSRVTSYCSRASNDFIEENERPTSS--RSYSSRTNLSPLLSSKGPHFGGYNVELVDDE 80
+F+SR + C ++ ++ +S YS+ +LSP S G+++ELVD +
Sbjct: 16 NFLSRTFNLCFKSLTTIPNKDVEAAASLPSEYSTSPHLSPFFSDFNHPSTGFDIELVDHD 75
Query: 81 TWQVSAGLAHAWRGLDEDKEAKSDVNVVDDDDDATSFEGDSDFDEIDNMRIRGDLFYKLD 140
W VS+G+A AWR V + D EG+ DF++IDNMR+RG+LFYKL+
Sbjct: 76 AWAVSSGVAQAWREPASRATTSFGPQVTGEALD-DHVEGELDFEDIDNMRVRGNLFYKLE 134
Query: 141 KDSKEFEEYSFDFHRRKSSKTKEGNKDSEKKEASKAKTDKKECQKKEALKRKSDAKESKR 200
+ SKEFEEY+ DFHR+KSSK KE E +KAKT K L + + SK
Sbjct: 135 RSSKEFEEYNLDFHRKKSSKRKE--------EVNKAKTTPNVVSKDHKLPKVDELTRSK- 185
Query: 201 KESPRPNLASRDDEFNKIVMSDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACI 260
++ R D+ N V KR RTPTFNQLT PYHEPFCLDI+ISKASVRAC+
Sbjct: 186 ------SVVPRVDDIN----DGSTVNKRQRTPTFNQLTGPYHEPFCLDIFISKASVRACV 235
Query: 261 VHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEK 320
VHRVTSKVV VAHSISKD KFDL ST+N T CAAVG ILAQRALADDIHD+VYTPRKGE+
Sbjct: 236 VHRVTSKVVAVAHSISKDFKFDLASTKNKTTCAAVGAILAQRALADDIHDIVYTPRKGER 295
Query: 321 LEGKLQIVLQAIIDNGVNVKVKLKQRKQK 349
+EGKLQIVLQ+IIDNG+NVKVK+KQR +K
Sbjct: 296 VEGKLQIVLQSIIDNGINVKVKIKQRPKK 324
>gi|449447649|ref|XP_004141580.1| PREDICTED: uncharacterized protein LOC101213193 [Cucumis sativus]
gi|449481530|ref|XP_004156210.1| PREDICTED: uncharacterized LOC101213193 [Cucumis sativus]
Length = 334
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 180/341 (52%), Positives = 223/341 (65%), Gaps = 30/341 (8%)
Query: 23 HFVSRVTSYCSRA--SNDFIEENERPTSSRSY---SSRTNLSPLLSSKGPHFGGYNVELV 77
FV R S+CS+A ENER S S S R L+PL P Y+VELV
Sbjct: 13 QFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELV 72
Query: 78 DDETWQVSAGLAHAWRGLDEDKEAKSDVNVVDDDDDATSFEGDSDFDEIDNMRIRGDLFY 137
DD+TW VS GLA AW ++ + ++D+ DSDFD+IDNMRIRG+LFY
Sbjct: 73 DDDTWAVSCGLARAWEAREKGWSGFENRYSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFY 132
Query: 138 KLDKDSKEFEEYSFDFHRRKSSKTKEGNKDSEKKEASKAKTDKKECQKKEALKRKSDAKE 197
KLD+ SKEFEE S DFHR+K S KE K+ K SK +C +K K
Sbjct: 133 KLDQASKEFEECSLDFHRKKKS-LKE--KEDMVKRRSKVNDKLDKCLASGQVKLPEHLK- 188
Query: 198 SKRKESPRPNLASRDDEFNKIVM---SDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKA 254
NK V+ +D+VEK++RTPTFNQLT+PYHEPFCLDI+ISKA
Sbjct: 189 ------------------NKYVIVERENDDVEKKLRTPTFNQLTSPYHEPFCLDIFISKA 230
Query: 255 SVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYT 314
SVRACI+HRVTSKVV VAHSISKDMKFDL S ++++ACAAVG +LAQRAL DDIH+++YT
Sbjct: 231 SVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYT 290
Query: 315 PRKGEKLEGKLQIVLQAIIDNGVNVKVKLKQRKQKKASYRP 355
PRKGE++EGKLQIVLQ++IDNG+NV VK+KQ+K+ + RP
Sbjct: 291 PRKGERIEGKLQIVLQSVIDNGINVTVKIKQQKRPRKLGRP 331
>gi|357480871|ref|XP_003610721.1| 50S ribosomal protein L18 [Medicago truncatula]
gi|355512056|gb|AES93679.1| 50S ribosomal protein L18 [Medicago truncatula]
Length = 404
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/304 (55%), Positives = 213/304 (70%), Gaps = 15/304 (4%)
Query: 53 SSRTNLSPLLSSKGPHFGGYNVELVDDETWQVSAGLAHAWRGLDEDKEAKS---DVNVVD 109
SS +LSP S+ G+++ELVD + W VS+ +A AWRG D S D V+D
Sbjct: 57 SSSLHLSPFFSNSNHPSSGFDIELVDRDAWGVSSVVAQAWRGGDLATAGASSSCDQCVID 116
Query: 110 DDDDATS--FEGDSDFDEIDNMRIRGDLFYKLDKDSKEFEEYSFDFHRRKSSKTKEGNKD 167
+ DA S E + DF+EIDN+R+RG+LFYKL++ S EFEEY+ +FH++KSSK K +
Sbjct: 117 EPLDACSSDLEDELDFEEIDNLRVRGNLFYKLERSSMEFEEYNIEFHKKKSSKKKNDKTE 176
Query: 168 SEKKEASKAKTDKKECQKKEALKRKSDAKESKRKESPRPNLASRDDEFNKIVMSDDNVEK 227
K +K KT K K + L + + + + PR DE N V K
Sbjct: 177 VTNKAKAKDKTTPKATSKDQKLPKVDEFGRNSKSVIPRM------DEIN----DSSPVNK 226
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
+ R PTFNQLT PYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKD+KFDL ST+
Sbjct: 227 KQRVPTFNQLTGPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDLKFDLTSTK 286
Query: 288 NATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKLKQRK 347
N T CAAVG ILAQRALADDIHD++YTPRKGE++EGKLQIVL +IID+G+NVK+K+KQR+
Sbjct: 287 NKTTCAAVGKILAQRALADDIHDIIYTPRKGERVEGKLQIVLNSIIDSGINVKLKIKQRQ 346
Query: 348 QKKA 351
+KK+
Sbjct: 347 KKKS 350
>gi|15229493|ref|NP_188884.1| 50S ribosomal protein L18-like protein [Arabidopsis thaliana]
gi|11994277|dbj|BAB01460.1| unnamed protein product [Arabidopsis thaliana]
gi|60547769|gb|AAX23848.1| hypothetical protein At3g22450 [Arabidopsis thaliana]
gi|71905479|gb|AAZ52717.1| expressed protein [Arabidopsis thaliana]
gi|71905481|gb|AAZ52718.1| expressed protein [Arabidopsis thaliana]
gi|332643120|gb|AEE76641.1| 50S ribosomal protein L18-like protein [Arabidopsis thaliana]
Length = 311
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 161/301 (53%), Positives = 197/301 (65%), Gaps = 35/301 (11%)
Query: 45 RPTSSRSYSSRTNLSPLLSSKGPHFGGYNVELVDDETWQVSAGLAHAWRGLDEDKEAKSD 104
RP + R +SSR + S G +E VDD+ W VS+ L+ AWR D S
Sbjct: 21 RP-APRCFSSRFSNSESGKVTVTGLSGCGIETVDDDVWHVSSSLSQAWRQFQADTAKNSP 79
Query: 105 VNV------VDDDDDATSFEGDSDFDEIDNMRIRGDLFYKLDKDSKEFEEYSFDFHRRKS 158
V + + DD+D D DEIDNMRIRGDLF+KLD+ SKEFEEY++DFHR+
Sbjct: 80 VTIQGVRETILDDEDP-------DHDEIDNMRIRGDLFFKLDRGSKEFEEYNYDFHRK-- 130
Query: 159 SKTKEGNKDSEKKEASKAKTDKKECQKKEALKRKSDAKESKRKESPRPNLASRDDEFNKI 218
++ K K+ ++E +K K D K+ + E KR +S E+ PN A
Sbjct: 131 NQHKNAKKEQNQEEETKIKKDNKKEVRDEYKKRN----DSFTGETDHPNEA--------- 177
Query: 219 VMSDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKD 278
V+KR RT TFNQLTAP+H PFCLDIYISK SVRAC++HRVTSKVV VAHSISKD
Sbjct: 178 ------VKKRERTFTFNQLTAPFHYPFCLDIYISKESVRACVIHRVTSKVVTVAHSISKD 231
Query: 279 MKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
MKFDL S RN ACAAVG +LAQR+L DDIHDV+YTPRKG+K+EGKLQ+VLQA+IDNGVN
Sbjct: 232 MKFDLGSRRNVAACAAVGAVLAQRSLEDDIHDVIYTPRKGDKIEGKLQVVLQALIDNGVN 291
Query: 339 V 339
V
Sbjct: 292 V 292
>gi|297830972|ref|XP_002883368.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
lyrata]
gi|297329208|gb|EFH59627.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
lyrata]
Length = 311
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/278 (56%), Positives = 187/278 (67%), Gaps = 36/278 (12%)
Query: 69 FGGYNVELVDDETWQVSAGLAHAWRGLDEDKEAKSDVNV-------VDDDDDATSFEGDS 121
G +E VDD+ W VS+ L+ AWR D S V + +DD+D
Sbjct: 44 LSGCGIETVDDDAWHVSSSLSQAWRQFQADTAKNSPVTIQGVRETMLDDED--------P 95
Query: 122 DFDEIDNMRIRGDLFYKLDKDSKEFEEYSFDFHRRKSSKTKEGNKDSEKKEASKAKTDKK 181
D DEIDNMRIRGDLFYKLD+ SKEFEEY++DFHR+ K + ++ E+ E + K +KK
Sbjct: 96 DHDEIDNMRIRGDLFYKLDRGSKEFEEYNYDFHRKNQHKNVKREQNQEE-ETTMKKNNKK 154
Query: 182 ECQKKEALKRKSDAKESKRKESPRPNLASRDDEFNKIVMSDDNVEKRVRTPTFNQLTAPY 241
E +E K+++D S E+ PN A V KR RT TFNQLTAP+
Sbjct: 155 EV--REEYKKRND---SFTGETDHPNAA---------------VRKRERTFTFNQLTAPF 194
Query: 242 HEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQ 301
H PFCLDIYISK SVRAC++HRVTSKVV VAHSISKDMKFDL STRNA ACAAVG +LAQ
Sbjct: 195 HYPFCLDIYISKESVRACVIHRVTSKVVTVAHSISKDMKFDLGSTRNAAACAAVGAVLAQ 254
Query: 302 RALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
R L DDIHDV+YTPRKG+K+EGKLQ+VLQA+IDNGV V
Sbjct: 255 RCLEDDIHDVIYTPRKGDKIEGKLQVVLQALIDNGVYV 292
>gi|326527543|dbj|BAK08046.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 327
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/285 (47%), Positives = 172/285 (60%), Gaps = 47/285 (16%)
Query: 70 GGYNVELVDDETWQVSAGLAHAWRGLDEDKEAKSDVNVVDDDDDATSFEG-----DSDFD 124
G+++++VDD+ W S SD D+ D+ G DSD D
Sbjct: 66 AGFHIDIVDDDLWPASFDFP-------------SDPMTGDECLDSFQENGEEQLHDSD-D 111
Query: 125 EIDNMRIRGDLFYKLDKDSKEFEEYSFDFHRRKSSKTKEGNKDSEKKEASKAKTDKKECQ 184
EID+MR R LFYKLD+ SKEFEEY+ RR G S+ C+
Sbjct: 112 EIDDMRHRKQLFYKLDRGSKEFEEYNLPLRRRWKKDKPNGKNPSD-------------CE 158
Query: 185 KKEALKRKSDAKESKRKESPRPNLASRDDEFNKIVMSDDNVE-KRVRTPTFNQLTAPYHE 243
K E ++ + K K K P V +DD VE KR R PTFNQ+T PYH
Sbjct: 159 KVEP-EKPARLKAPKLKAEP-------------AVHTDDIVEVKRDRVPTFNQMTDPYHH 204
Query: 244 PFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRA 303
PFCLDI++SK SVRAC VHRVTS+VV VAHSISKDMKFDL S + AC AVG +LA+RA
Sbjct: 205 PFCLDIHVSKGSVRACFVHRVTSRVVSVAHSISKDMKFDLGSRKGIKACVAVGALLAKRA 264
Query: 304 LADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKLKQRKQ 348
+ DDIH+ +YTPRKG+K+EGK+++VL+ II+NGV+VKVKLKQR++
Sbjct: 265 IEDDIHNAIYTPRKGDKIEGKIEVVLRGIIENGVDVKVKLKQRRK 309
>gi|242082265|ref|XP_002445901.1| hypothetical protein SORBIDRAFT_07g027720 [Sorghum bicolor]
gi|241942251|gb|EES15396.1| hypothetical protein SORBIDRAFT_07g027720 [Sorghum bicolor]
Length = 345
Score = 233 bits (595), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 137/285 (48%), Positives = 183/285 (64%), Gaps = 41/285 (14%)
Query: 71 GYNVELVDDETWQVSAGLA-HAWRGLDEDKEAKSDVNVVDDDDDATSFEGDSDFDEIDNM 129
G+++++VD + W S G + A RG E D++ +DD + F DEID+M
Sbjct: 69 GFHIDVVDSDLWTPSFGFSSEAERG----NEYLDDLHR-NDDSEVRDFS-----DEIDDM 118
Query: 130 RIRGDLFYKLDKDSKEFEEYSFDFHRRKSSKTKEGNKDSEKKEASKAKTDKKECQKKEAL 189
R R LFYKLD+ SKE+EE S RRK+ ++ + AK + KEC+ + A
Sbjct: 119 RHRKKLFYKLDRQSKEYEENSLPLRRRKN------------RDKTNAK-NPKECKVEPAK 165
Query: 190 KRKSDAKESKRKESPRPNLASRDDEFNKIVMSDDNVEKRVRTPTFNQLTAPYHEPFCLDI 249
S+A ++ + A RDD+ ++ KR R PTFNQ+T PYH PFCLDI
Sbjct: 166 SVSSNAPKATK-------CAIRDDDMVEV--------KRERMPTFNQMTDPYHHPFCLDI 210
Query: 250 YISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDS--TRNATACAAVGGILAQRALADD 307
+++K SVRAC VHRVTS+VV VAHSISKDMKFDL S + ACAAVG +LA+RAL DD
Sbjct: 211 HVTKGSVRACFVHRVTSRVVAVAHSISKDMKFDLGSKKGKGMKACAAVGALLAKRALEDD 270
Query: 308 IHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKLKQRKQKKAS 352
IH+ +YTPRKG+++EGK+++VL AII+NGV+VKVKLKQRK K S
Sbjct: 271 IHNALYTPRKGDRIEGKIKVVLHAIIENGVDVKVKLKQRKLIKTS 315
>gi|255552181|ref|XP_002517135.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223543770|gb|EEF45298.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 140
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/127 (83%), Positives = 118/127 (92%)
Query: 226 EKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDS 285
+K+VRTPTFNQLT PYHEPFCLDIYISKASVRAC++HRVTSKVV VAHSISKD+KFDL S
Sbjct: 9 KKKVRTPTFNQLTGPYHEPFCLDIYISKASVRACVIHRVTSKVVAVAHSISKDLKFDLSS 68
Query: 286 TRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKLKQ 345
TRN ACA VG +LAQRALADDIHDV+YT RKGEKLEGKLQIVLQ+I+DNG+NVKVKLKQ
Sbjct: 69 TRNVAACATVGAVLAQRALADDIHDVIYTQRKGEKLEGKLQIVLQSIVDNGINVKVKLKQ 128
Query: 346 RKQKKAS 352
R++ KAS
Sbjct: 129 RQRGKAS 135
>gi|218184773|gb|EEC67200.1| hypothetical protein OsI_34077 [Oryza sativa Indica Group]
Length = 323
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/293 (46%), Positives = 175/293 (59%), Gaps = 45/293 (15%)
Query: 63 SSKGPHFGGYNVELVDDETWQVSAGLA--HAWR-GLDEDKEAKSDVNVVDDDDDATSFEG 119
S+ P + +++VD + W S L+ HA + G +D + D V D +D
Sbjct: 60 SNANPLGNRFQIDVVDSDLWPASFDLSMDHAPKTGCPDDFQEHEDGEVHDSED------- 112
Query: 120 DSDFDEIDNMRIRGDLFYKLDKDSKEFEEYSFDF-HRRKSSKTKEGNKDSEKKEASKAKT 178
EID+MR R LFYKLD+ SKEFEE + HRRK K N KE+ K
Sbjct: 113 -----EIDDMRHRKKLFYKLDRGSKEFEENNVSLRHRRKREKGNVKNP----KESKKVDP 163
Query: 179 DKKECQKKEALKRKSDAKESKRKESPRPNLASRDDEFNKIVMSDDNVE-KRVRTPTFNQL 237
D+ K LK K +E +D VE KR R PTFNQ+
Sbjct: 164 DESASVKLPKLKTKYTVRE------------------------EDVVEAKRDRVPTFNQM 199
Query: 238 TAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGG 297
T PYH PFCLDI+++K SVRAC VHRV+S+VV VAHSISKDMKFD+ S + ACAAVG
Sbjct: 200 TDPYHHPFCLDIHVTKGSVRACFVHRVSSRVVTVAHSISKDMKFDVGSRKGMKACAAVGA 259
Query: 298 ILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKLKQRKQKK 350
+LA+RA+ DDIH+ +YTPRKG+++EGK+++VL+AIIDNGV VKVKLKQRK K
Sbjct: 260 LLAKRAIEDDIHNAIYTPRKGDRIEGKIEVVLRAIIDNGVEVKVKLKQRKPTK 312
>gi|115482592|ref|NP_001064889.1| Os10g0484400 [Oryza sativa Japonica Group]
gi|78708825|gb|ABB47800.1| expressed protein [Oryza sativa Japonica Group]
gi|113639498|dbj|BAF26803.1| Os10g0484400 [Oryza sativa Japonica Group]
gi|215741465|dbj|BAG97960.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222613031|gb|EEE51163.1| hypothetical protein OsJ_31935 [Oryza sativa Japonica Group]
Length = 323
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/293 (46%), Positives = 175/293 (59%), Gaps = 45/293 (15%)
Query: 63 SSKGPHFGGYNVELVDDETWQVSAGLA--HAWR-GLDEDKEAKSDVNVVDDDDDATSFEG 119
S+ P + +++VD + W S L+ HA + G +D + D + D +D
Sbjct: 60 SNANPLGNRFQIDVVDSDLWPASFDLSMDHAPKTGCPDDFQEHEDGEMHDSED------- 112
Query: 120 DSDFDEIDNMRIRGDLFYKLDKDSKEFEEYSFDF-HRRKSSKTKEGNKDSEKKEASKAKT 178
EID+MR R LFYKLD+ SKEFEE + HRRK K N KE+ K
Sbjct: 113 -----EIDDMRHRKKLFYKLDRGSKEFEENNVSLRHRRKREKGNVKNP----KESKKVDP 163
Query: 179 DKKECQKKEALKRKSDAKESKRKESPRPNLASRDDEFNKIVMSDDNVE-KRVRTPTFNQL 237
D+ K LK K +E +D VE KR R PTFNQ+
Sbjct: 164 DESASVKLPKLKTKYTVRE------------------------EDVVEAKRDRVPTFNQM 199
Query: 238 TAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGG 297
T PYH PFCLDI+++K SVRAC VHRV+S+VV VAHSISKDMKFD+ S + ACAAVG
Sbjct: 200 TDPYHHPFCLDIHVTKGSVRACFVHRVSSRVVTVAHSISKDMKFDVGSRKGMKACAAVGA 259
Query: 298 ILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKLKQRKQKK 350
+LA+RA+ DDIH+ +YTPRKG+++EGK+++VL+AIIDNGV VKVKLKQRK K
Sbjct: 260 LLAKRAIEDDIHNAIYTPRKGDRIEGKIEVVLRAIIDNGVEVKVKLKQRKPTK 312
>gi|22094358|gb|AAM91885.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 345
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/293 (46%), Positives = 175/293 (59%), Gaps = 45/293 (15%)
Query: 63 SSKGPHFGGYNVELVDDETWQVSAGLA--HAWR-GLDEDKEAKSDVNVVDDDDDATSFEG 119
S+ P + +++VD + W S L+ HA + G +D + D + D +D
Sbjct: 60 SNANPLGNRFQIDVVDSDLWPASFDLSMDHAPKTGCPDDFQEHEDGEMHDSED------- 112
Query: 120 DSDFDEIDNMRIRGDLFYKLDKDSKEFEEYSFDF-HRRKSSKTKEGNKDSEKKEASKAKT 178
EID+MR R LFYKLD+ SKEFEE + HRRK K N KE+ K
Sbjct: 113 -----EIDDMRHRKKLFYKLDRGSKEFEENNVSLRHRRKREKGNVKNP----KESKKVDP 163
Query: 179 DKKECQKKEALKRKSDAKESKRKESPRPNLASRDDEFNKIVMSDDNVE-KRVRTPTFNQL 237
D+ K LK K +E +D VE KR R PTFNQ+
Sbjct: 164 DESASVKLPKLKTKYTVRE------------------------EDVVEAKRDRVPTFNQM 199
Query: 238 TAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGG 297
T PYH PFCLDI+++K SVRAC VHRV+S+VV VAHSISKDMKFD+ S + ACAAVG
Sbjct: 200 TDPYHHPFCLDIHVTKGSVRACFVHRVSSRVVTVAHSISKDMKFDVGSRKGMKACAAVGA 259
Query: 298 ILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKLKQRKQKK 350
+LA+RA+ DDIH+ +YTPRKG+++EGK+++VL+AIIDNGV VKVKLKQRK K
Sbjct: 260 LLAKRAIEDDIHNAIYTPRKGDRIEGKIEVVLRAIIDNGVEVKVKLKQRKPTK 312
>gi|226502000|ref|NP_001144270.1| uncharacterized protein LOC100277147 [Zea mays]
gi|195639396|gb|ACG39166.1| hypothetical protein [Zea mays]
Length = 333
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/292 (45%), Positives = 174/292 (59%), Gaps = 42/292 (14%)
Query: 63 SSKGPHFGGYNVELVDDETWQVSAGLAHAWRGLDEDKEAKSDVNVVDDDDDATSFEGDSD 122
SS P +++++VD + W S L L + + +V + +D E
Sbjct: 61 SSSDPLGPRFSIDVVDSDHWPSSFDL------LSDAARSNECPDVFEQHEDD---ELHDS 111
Query: 123 FDEIDNMRIRGDLFYKLDKDSKEFEEYSFDFHRRKSSKTKEGNKDSEKKEASKAKTDKKE 182
+DEID+MR R LFYKLD+ S+EFEE + RRK KT N KE
Sbjct: 112 YDEIDDMRHRKKLFYKLDRGSREFEENNVLLRRRKRDKTSAKNP--------------KE 157
Query: 183 CQKKEALKRKS-DAKESKRKESPRPNLASRDDEFNKIVMSDDNVE-KRVRTPTFNQLTAP 240
C++ + K S + + K K S R DD VE KR R PTFNQ+T P
Sbjct: 158 CKEAQPPKSVSTNVPKLKEKRSMR---------------VDDLVEVKRERVPTFNQMTDP 202
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDS--TRNATACAAVGGI 298
YH PFCLDI+++K SVRAC VHRVTS+VV VAHSISKDMKFDL S + AC AVG +
Sbjct: 203 YHHPFCLDIHVTKGSVRACFVHRVTSRVVTVAHSISKDMKFDLGSKKGKGMKACVAVGAL 262
Query: 299 LAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKLKQRKQKK 350
LA+RA+ DDIH+ +YTPRKG+++EGK++ VL+AI +NGV+VKVKLKQRK K
Sbjct: 263 LAKRAIEDDIHNAIYTPRKGDRIEGKIEAVLRAITENGVDVKVKLKQRKPIK 314
>gi|223948281|gb|ACN28224.1| unknown [Zea mays]
gi|413950944|gb|AFW83593.1| hypothetical protein ZEAMMB73_340872 [Zea mays]
Length = 333
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 134/295 (45%), Positives = 175/295 (59%), Gaps = 42/295 (14%)
Query: 63 SSKGPHFGGYNVELVDDETWQVSAGLAHAWRGLDEDKEAKSDVNVVDDDDDATSFEGDSD 122
SS P +++++VD + W S L L + + +V + +D + D
Sbjct: 61 SSSDPLGPRFSIDVVDSDHWPSSFDL------LSDAARSNECPDVFEQREDDELHDSD-- 112
Query: 123 FDEIDNMRIRGDLFYKLDKDSKEFEEYSFDFHRRKSSKTKEGNKDSEKKEASKAKTDKKE 182
DEID+MR R LFYKLD+ S+EFEE + RRK KT N KE
Sbjct: 113 -DEIDDMRHRKKLFYKLDRGSREFEENNVLLRRRKRDKTSAKNP--------------KE 157
Query: 183 CQKKEALKRKS-DAKESKRKESPRPNLASRDDEFNKIVMSDDNVE-KRVRTPTFNQLTAP 240
C++ + K S + + K K S R DD VE KR R PTFNQ+T P
Sbjct: 158 CKEAQPPKSVSTNVPKLKEKRSMR---------------VDDLVEVKRERVPTFNQMTDP 202
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDS--TRNATACAAVGGI 298
YH PFCLDI+++K SVRAC VHRVTS+VV VAHSISKDMKFDL S + AC AVG +
Sbjct: 203 YHHPFCLDIHVTKGSVRACFVHRVTSRVVTVAHSISKDMKFDLGSKKGKGMKACVAVGAL 262
Query: 299 LAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKLKQRKQKKASY 353
LA+RA+ DDIH+ +YTPRKG+++EGK++ VL AI +NGV+VKVKLKQRK K ++
Sbjct: 263 LAKRAIEDDIHNAIYTPRKGDRIEGKIEAVLCAITENGVDVKVKLKQRKPIKNTH 317
>gi|148907754|gb|ABR17003.1| unknown [Picea sitchensis]
Length = 583
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 134/328 (40%), Positives = 191/328 (58%), Gaps = 26/328 (7%)
Query: 28 VTSYCSRASNDFIEENERP---TSSRSYSSRTNLSPLLS-SKGPH-FGGYNVELVDDETW 82
+ SY + A+ F E + S +Y + L +S SKG + G +EL+D + +
Sbjct: 16 IISYRALATAPFHSEPSKHKGNASPNNYLGASRLPNTVSISKGTNNLKGMKIELLDSDLF 75
Query: 83 QVSAGLAHAWRGLDEDKEAKSDVNVVDDDDDATSFE---GDSDFDEIDNMRIRGDLFYKL 139
+ A R SD + V + + G D D++++MR RGDL YKL
Sbjct: 76 WAPSVFADVSR-------VSSDCSGVSGNHAEIQLKEAPGHHDIDKLEDMRFRGDLLYKL 128
Query: 140 DKDSKEFEEYSFDFHRRKSSKTKEGNKDSEKKEASKAKTDKKECQKKEALKRKSDAKESK 199
D DS+E EEY FDFHRRK N+ + + +++ D ++ K RK+ +K
Sbjct: 129 DIDSRESEEYDFDFHRRKPK-----NQGTGHQMKTRSVQDNEKFAKSNVNLRKNKSKHMT 183
Query: 200 RKESPRPNLASRDDEFNKIVMSD------DNVEKRVRTPTFNQLTAPYHEPFCLDIYISK 253
K P D+ +K V +D + +E++ + +F ++T Y PFCLDI++SK
Sbjct: 184 CKHEPANENYDNVDKESKSVPADFWLREEEALERKKKLLSFKEMTDAYMHPFCLDIFVSK 243
Query: 254 ASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVY 313
+SV ACIVHRVT VV VA SISKDMK DL S ++ TACAAVGGILAQRA+ADDI+ VY
Sbjct: 244 SSVCACIVHRVTCNVVAVAQSISKDMKSDLISRKDLTACAAVGGILAQRAIADDIYTAVY 303
Query: 314 TPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
TPRKG+KLEGK+ +VLQ+II++GV++KV
Sbjct: 304 TPRKGDKLEGKVMVVLQSIINHGVDIKV 331
>gi|224111280|ref|XP_002332948.1| predicted protein [Populus trichocarpa]
gi|222834260|gb|EEE72737.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 207 bits (527), Expect = 6e-51, Method: Composition-based stats.
Identities = 100/111 (90%), Positives = 105/111 (94%)
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
TFNQLT PYHEPFCLDIYISKASVRAC++HR TSKVV VAHSISKD KFDL ST+NA AC
Sbjct: 1 TFNQLTGPYHEPFCLDIYISKASVRACVIHRETSKVVAVAHSISKDFKFDLASTKNAAAC 60
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKL 343
AAVGGILAQRALADDIHDVVYTPRKGE+LEGKLQIVLQAIIDNG+NVKVKL
Sbjct: 61 AAVGGILAQRALADDIHDVVYTPRKGERLEGKLQIVLQAIIDNGINVKVKL 111
>gi|18087892|gb|AAL59046.1|AC087182_29 hypothetical protein [Oryza sativa Japonica Group]
Length = 430
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 121/228 (53%), Gaps = 45/228 (19%)
Query: 72 YNVELVDDETWQVSAGLA--HAWR-GLDEDKEAKSDVNVVDDDDDATSFEGDSDFDEIDN 128
+ +++VD + W S L+ HA + G +D + D + D +D EID+
Sbjct: 195 FQIDVVDSDLWPASFDLSMDHAPKTGCPDDFQEHEDGEMHDSED------------EIDD 242
Query: 129 MRIRGDLFYKLDKDSKEFEEYSFDF-HRRKSSKTKEGNKDSEKKEASKAKTDKKECQKKE 187
MR R LFYKLD+ SKEFEE + HRRK K N KE+ K D+ K
Sbjct: 243 MRHRKKLFYKLDRGSKEFEENNVSLRHRRKREKGNVKNP----KESKKVDPDESASVKLP 298
Query: 188 ALKRKSDAKESKRKESPRPNLASRDDEFNKIVMSDDNVE-KRVRTPTFNQLTAPYHEPFC 246
LK K +E +D VE KR R PTFNQ+T PYH PFC
Sbjct: 299 KLKTKYTVRE------------------------EDVVEAKRDRVPTFNQMTDPYHHPFC 334
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
LDI+++K SVRAC VHRV+S+VV VAHSISKDMKFD+ S + T AA
Sbjct: 335 LDIHVTKGSVRACFVHRVSSRVVTVAHSISKDMKFDVGSRKECTGYAA 382
>gi|116791242|gb|ABK25907.1| unknown [Picea sitchensis]
Length = 186
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 83/122 (68%), Gaps = 4/122 (3%)
Query: 226 EKRVRTP----TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKF 281
EK+ + P +F Q T Y +PF LD++ISK V A I HRVTSK V VA + SKD+K
Sbjct: 64 EKKSKNPHKHVSFKQRTIAYMQPFTLDVFISKRFVSASITHRVTSKQVAVAGTNSKDIKA 123
Query: 282 DLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
L S + AC A+G ILA+R+ D++ VYTPR+ +K EGK++ V+Q++IDNG+++KV
Sbjct: 124 ALRSKSDIPACLAIGRILAERSREADVYTAVYTPRERDKFEGKIRAVVQSLIDNGIDIKV 183
Query: 342 KL 343
L
Sbjct: 184 YL 185
>gi|115483410|ref|NP_001065375.1| Os10g0559900 [Oryza sativa Japonica Group]
gi|18873848|gb|AAL79794.1|AC079874_17 hypothetical protein [Oryza sativa Japonica Group]
gi|31433497|gb|AAP55002.1| expressed protein [Oryza sativa Japonica Group]
gi|113639907|dbj|BAF27212.1| Os10g0559900 [Oryza sativa Japonica Group]
gi|125532939|gb|EAY79504.1| hypothetical protein OsI_34632 [Oryza sativa Indica Group]
gi|125575679|gb|EAZ16963.1| hypothetical protein OsJ_32448 [Oryza sativa Japonica Group]
gi|215687201|dbj|BAG91766.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 187
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 79/122 (64%), Gaps = 4/122 (3%)
Query: 226 EKRVRTP----TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKF 281
EKR + P +F Q T Y EPF LD++ISK V A + HR T + V VA + SKD+K
Sbjct: 65 EKRSKNPHKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRTTCRQVAVAGTNSKDIKA 124
Query: 282 DLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
L S + AC AVG LA+RA D++ YTPR+ +K EGK++ V+Q++IDNG+NVKV
Sbjct: 125 ALKSRSDIPACLAVGRFLAERAKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGINVKV 184
Query: 342 KL 343
L
Sbjct: 185 YL 186
>gi|224125410|ref|XP_002319579.1| predicted protein [Populus trichocarpa]
gi|222857955|gb|EEE95502.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 76/111 (68%)
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
+F Q T Y EPF LD++ISK V A + HRVTSK V VA + SKD+K L S + AC
Sbjct: 76 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLKSRSDIPAC 135
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKL 343
AVG ILA RA D++ YTPR+ +K EGK++ V+Q++IDNG++VK+ L
Sbjct: 136 LAVGQILADRAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYL 186
>gi|255588441|ref|XP_002534606.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223524931|gb|EEF27777.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 188
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 82/123 (66%), Gaps = 5/123 (4%)
Query: 226 EKRVRTP-----TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMK 280
EK+ + P +F Q T Y EPF LD++ISK V A + HRVTSK V VA + SKD+K
Sbjct: 65 EKKSKNPNNKHMSFKQRTKAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIK 124
Query: 281 FDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
L S + AC A+G IL++RA D++ YTPR+ +K EGK++ V+Q++IDNG+++K
Sbjct: 125 AALRSRSDIPACLAIGRILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIK 184
Query: 341 VKL 343
V L
Sbjct: 185 VYL 187
>gi|388494676|gb|AFK35404.1| unknown [Lotus japonicus]
Length = 148
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 76/111 (68%)
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
+F Q T + EPF LD++ISK V A + HRVTSK V VA + SKD+K L S + AC
Sbjct: 37 SFKQRTVAFMEPFTLDVFISKRFVSASVTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 96
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKL 343
A+G ILA+RA D++ YTPR +K EGK++ V+Q++IDNG+++KV L
Sbjct: 97 IAIGRILAERAREADVYTASYTPRDRDKFEGKIRAVVQSLIDNGIDIKVYL 147
>gi|359487879|ref|XP_002266607.2| PREDICTED: uncharacterized protein LOC100250278 [Vitis vinifera]
gi|298204993|emb|CBI34300.3| unnamed protein product [Vitis vinifera]
Length = 187
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 226 EKRVRTP----TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKF 281
EK+ + P +F Q T Y EPF LD+ ISK V A + HRVTSK V VA + SKD+K
Sbjct: 65 EKKSKNPNKHISFKQRTGAYMEPFTLDVLISKRFVSASLTHRVTSKQVAVAGTNSKDIKA 124
Query: 282 DLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
L S + AC A+G IL++RA D++ YTPR +K EGK++ V+Q++IDNG++VKV
Sbjct: 125 VLKSRSDIPACLAIGRILSERAREADVYTASYTPRDRDKFEGKIRAVVQSLIDNGIDVKV 184
Query: 342 KL 343
L
Sbjct: 185 YL 186
>gi|242040201|ref|XP_002467495.1| hypothetical protein SORBIDRAFT_01g029100 [Sorghum bicolor]
gi|241921349|gb|EER94493.1| hypothetical protein SORBIDRAFT_01g029100 [Sorghum bicolor]
Length = 187
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 78/122 (63%), Gaps = 4/122 (3%)
Query: 226 EKRVRTP----TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKF 281
EKR + P +F Q T Y EPF LD++ISK V A + HR T + V VA + SKD+K
Sbjct: 65 EKRSKNPHKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRSTCRQVAVAGTNSKDIKA 124
Query: 282 DLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
L S + AC AVG LA+RA D+ YTPR+ +K EGK++ V+Q++IDNG+NVK+
Sbjct: 125 VLKSRSDIPACLAVGRFLAERAKEADVFTCTYTPRERDKFEGKIRAVVQSLIDNGINVKL 184
Query: 342 KL 343
L
Sbjct: 185 YL 186
>gi|223947491|gb|ACN27829.1| unknown [Zea mays]
Length = 173
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 79/122 (64%), Gaps = 4/122 (3%)
Query: 226 EKRVRTP----TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKF 281
EKR + P +F Q T + EPF LD++ISK V A + HR T + V VA + SKD+K
Sbjct: 51 EKRSKNPHKHISFKQRTIAHMEPFTLDVFISKRFVSASLTHRSTCRQVAVAGTNSKDIKA 110
Query: 282 DLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
L S + AC AVG LA+RA D++ YTPR+ +K EGK++ V+Q++IDNG+NVK+
Sbjct: 111 ALRSRSDVPACLAVGRFLAERAKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGINVKL 170
Query: 342 KL 343
L
Sbjct: 171 YL 172
>gi|449442869|ref|XP_004139203.1| PREDICTED: uncharacterized protein LOC101215592 [Cucumis sativus]
gi|449525565|ref|XP_004169787.1| PREDICTED: uncharacterized LOC101215592 [Cucumis sativus]
Length = 187
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 77/112 (68%)
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
+F Q T Y EPF LD++ISK V A + HRVT K V VA + SKD+K L S + AC
Sbjct: 76 SFKQRTLAYMEPFTLDVFISKRFVSASLTHRVTCKQVAVAGTNSKDIKAVLQSRSDIPAC 135
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKLK 344
AVG ILA+RA D++ YTPR+ +K EGK++ V+Q++IDNG++VK+ L+
Sbjct: 136 LAVGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYLE 187
>gi|356508210|ref|XP_003522852.1| PREDICTED: uncharacterized protein LOC100804348 [Glycine max]
Length = 187
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 76/111 (68%)
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
+F Q T Y EPF LD++ISK V A + HRVTSK V VA + SKD+K L S + AC
Sbjct: 76 SFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 135
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKL 343
A+G ILA+RA D++ YTPR +K EGK++ V+Q++IDNG+++KV L
Sbjct: 136 IAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGIDIKVYL 186
>gi|226494019|ref|NP_001143121.1| uncharacterized protein LOC100275599 [Zea mays]
gi|194703688|gb|ACF85928.1| unknown [Zea mays]
gi|195614668|gb|ACG29164.1| hypothetical protein [Zea mays]
gi|195616076|gb|ACG29868.1| hypothetical protein [Zea mays]
gi|195646646|gb|ACG42791.1| hypothetical protein [Zea mays]
gi|414867690|tpg|DAA46247.1| TPA: hypothetical protein ZEAMMB73_679563 [Zea mays]
gi|414867691|tpg|DAA46248.1| TPA: hypothetical protein ZEAMMB73_679563 [Zea mays]
Length = 187
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 79/122 (64%), Gaps = 4/122 (3%)
Query: 226 EKRVRTP----TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKF 281
EKR + P +F Q T + EPF LD++ISK V A + HR T + V VA + SKD+K
Sbjct: 65 EKRSKNPHKHISFKQRTIAHMEPFTLDVFISKRFVSASLTHRSTCRQVAVAGTNSKDIKA 124
Query: 282 DLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
L S + AC AVG LA+RA D++ YTPR+ +K EGK++ V+Q++IDNG+NVK+
Sbjct: 125 ALRSRSDVPACLAVGRFLAERAKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGINVKL 184
Query: 342 KL 343
L
Sbjct: 185 YL 186
>gi|297843672|ref|XP_002889717.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
lyrata]
gi|297335559|gb|EFH65976.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
lyrata]
Length = 189
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 226 EKRVRTP----TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKF 281
EK+ + P +F Q T Y EPF LD++ISK V A + HRVT + V VA + SKD+K
Sbjct: 67 EKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKA 126
Query: 282 DLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
L S + AC ++G IL++RA D++ YTPR EK EGK++ V+Q++IDNG++VK+
Sbjct: 127 VLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQEKFEGKIRAVVQSLIDNGIDVKI 186
Query: 342 KL 343
L
Sbjct: 187 YL 188
>gi|356517682|ref|XP_003527515.1| PREDICTED: uncharacterized protein LOC100805468 [Glycine max]
Length = 202
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 76/111 (68%)
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
+F Q T Y EPF LD++ISK V A + HRVTSK V VA + SKD+K L S + AC
Sbjct: 91 SFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 150
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKL 343
A+G ILA+RA D++ YTPR +K EGK++ V+Q++IDNG+++KV L
Sbjct: 151 IAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGIDIKVYL 201
>gi|30680844|ref|NP_849617.1| Ribosomal L.8/L5e family protein [Arabidopsis thaliana]
gi|26453256|dbj|BAC43701.1| unknown protein [Arabidopsis thaliana]
gi|28372952|gb|AAO39958.1| At1g08850 [Arabidopsis thaliana]
gi|332190237|gb|AEE28358.1| Ribosomal L.8/L5e family protein [Arabidopsis thaliana]
Length = 189
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 226 EKRVRTP----TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKF 281
EK+ + P +F Q T Y EPF LD++ISK V A + HRVT + V VA + SKD+K
Sbjct: 67 EKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKA 126
Query: 282 DLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
L S + AC ++G IL++RA D++ YTPR +K EGK++ V+Q++IDNG++VK+
Sbjct: 127 VLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDVKI 186
Query: 342 KL 343
L
Sbjct: 187 YL 188
>gi|238478415|ref|NP_001154322.1| Ribosomal L.8/L5e family protein [Arabidopsis thaliana]
gi|332190238|gb|AEE28359.1| Ribosomal L.8/L5e family protein [Arabidopsis thaliana]
Length = 234
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 226 EKRVRTP----TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKF 281
EK+ + P +F Q T Y EPF LD++ISK V A + HRVT + V VA + SKD+K
Sbjct: 112 EKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKA 171
Query: 282 DLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
L S + AC ++G IL++RA D++ YTPR +K EGK++ V+Q++IDNG++VK+
Sbjct: 172 VLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDVKI 231
Query: 342 KL 343
L
Sbjct: 232 YL 233
>gi|357147393|ref|XP_003574328.1| PREDICTED: uncharacterized protein LOC100845820 [Brachypodium
distachyon]
Length = 187
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 4/122 (3%)
Query: 226 EKRVRTP----TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKF 281
EKR + P +F Q T + EPF LD++ISK V A + HR T + V VA + SKD+K
Sbjct: 65 EKRSKNPHKHISFKQRTIAHMEPFTLDVFISKRFVSASLTHRSTCRQVAVAGTNSKDVKA 124
Query: 282 DLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
L S + AC +VG LA+RA D++ YTPR+ ++ EGK++ V+Q++IDNG++VKV
Sbjct: 125 ALASRSDVPACLSVGRFLAERAKEADVYACTYTPRERDRFEGKIRAVVQSLIDNGIHVKV 184
Query: 342 KL 343
L
Sbjct: 185 YL 186
>gi|326489354|dbj|BAK01660.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501304|dbj|BAJ98883.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518152|dbj|BAK07328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 187
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 79/122 (64%), Gaps = 4/122 (3%)
Query: 226 EKRVRTP----TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKF 281
EKR + P +F Q T + EPF LD++ISK V A + HR T + V VA + SKD+K
Sbjct: 65 EKRSKNPHKHISFKQRTIAHMEPFTLDVFISKRFVSASLTHRSTCRQVAVAGTNSKDVKA 124
Query: 282 DLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
L S + AC +VG LA+RA D++ YTPR+ ++ EGK++ V+Q++IDNG++VK+
Sbjct: 125 ALTSRSDVPACLSVGRFLAERAKEADVYACTYTPRERDRFEGKIRAVVQSLIDNGIHVKL 184
Query: 342 KL 343
L
Sbjct: 185 YL 186
>gi|302822798|ref|XP_002993055.1| hypothetical protein SELMODRAFT_136453 [Selaginella moellendorffii]
gi|300139147|gb|EFJ05894.1| hypothetical protein SELMODRAFT_136453 [Selaginella moellendorffii]
Length = 132
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 72/107 (67%)
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
++ + T Y PF +D+YIS V A IVHRVTSK V VA + +KD++ L S +A+AC
Sbjct: 25 SWKRATEKYMRPFSIDVYISSRYVNAKIVHRVTSKTVAVATTNAKDLRASLPSLTSASAC 84
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+G ++A+RA+ D++ V Y PRK E+L+ KL+IVL + +NGV V
Sbjct: 85 EVIGKLIAERAMEADVYAVTYVPRKNERLQEKLEIVLNTVKENGVAV 131
>gi|302780293|ref|XP_002971921.1| hypothetical protein SELMODRAFT_96295 [Selaginella moellendorffii]
gi|300160220|gb|EFJ26838.1| hypothetical protein SELMODRAFT_96295 [Selaginella moellendorffii]
Length = 132
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 72/107 (67%)
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
++ + T Y PF +D+YIS V A IVHRVTSK V VA + +KD++ L S +A+AC
Sbjct: 25 SWKRATEKYMRPFSIDVYISARYVNAKIVHRVTSKTVAVATTNAKDLRASLPSLTSASAC 84
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+G ++A+RA+ D++ V Y PRK E+L+ KL+IVL + +NGV V
Sbjct: 85 EVIGKLIAERAMEADVYAVTYVPRKNERLQEKLEIVLNTVKENGVAV 131
>gi|255642189|gb|ACU21359.1| unknown [Glycine max]
Length = 103
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 71/101 (70%)
Query: 243 EPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQR 302
EPF LD++ISK V A + HRVTSK V VA + SKD+K L S + AC A+G ILA+R
Sbjct: 2 EPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIGRILAER 61
Query: 303 ALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKL 343
A D++ YTPR +K EGK++ V+Q++IDNG+++KV L
Sbjct: 62 AKEADVYTGSYTPRGRDKFEGKIRAVVQSLIDNGIDIKVYL 102
>gi|358249214|ref|NP_001240012.1| uncharacterized protein LOC100820550 [Glycine max]
gi|255640812|gb|ACU20689.1| unknown [Glycine max]
Length = 197
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 81/135 (60%), Gaps = 3/135 (2%)
Query: 206 PNLASRDDEFNKIVMSDDNVEKRVRTP---TFNQLTAPYHEPFCLDIYISKASVRACIVH 262
PN + DD F + + + + + P ++ Q T Y PF L+++ SK + A +VH
Sbjct: 60 PNPSRSDDSFIRAAWTRRSRGEAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVVH 119
Query: 263 RVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLE 322
R TSKV+ VA + +KD++ L S + AC VG ++AQR++ D++ V Y PRK E++E
Sbjct: 120 RGTSKVICVATTNAKDLRNSLPSLIDHNACRVVGNLIAQRSMEADVYAVAYEPRKDERIE 179
Query: 323 GKLQIVLQAIIDNGV 337
G+L IVL I +NG+
Sbjct: 180 GRLGIVLDTIKENGI 194
>gi|168054579|ref|XP_001779708.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668906|gb|EDQ55504.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 65/96 (67%)
Query: 244 PFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRA 303
PF LD+++S + A ++HRVTSKVV V + +K+ + +L S ++ TAC VG LAQRA
Sbjct: 23 PFSLDVFLSGKYIHASVMHRVTSKVVAVCSTNAKEFRNNLKSYKDFTACKVVGETLAQRA 82
Query: 304 LADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
D+ VVY PRKGEK EG+L V+ I D+G+NV
Sbjct: 83 KEADVFTVVYEPRKGEKFEGRLAAVVHTIEDSGINV 118
>gi|168036088|ref|XP_001770540.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678248|gb|EDQ64709.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 196
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 72/107 (67%)
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
++ Q T Y +PF LD++IS V A ++HRVTS VV VA + +KD++ L S +A AC
Sbjct: 89 SWKQRTEKYFKPFILDVFISSKYVHAKVMHRVTSSVVSVATTNAKDLRLSLPSLSDANAC 148
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+G ++A+R++ DI+ V + RK EKLEGKL IV+ + I++G+ +
Sbjct: 149 RLIGQLIAERSIEQDIYAVAFDLRKNEKLEGKLAIVIDSAIEHGLTL 195
>gi|356526443|ref|XP_003531827.1| PREDICTED: 50S ribosomal protein L18-like [Glycine max]
Length = 197
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 80/135 (59%), Gaps = 3/135 (2%)
Query: 206 PNLASRDDEFNKIVMSDDNVEKRVRTP---TFNQLTAPYHEPFCLDIYISKASVRACIVH 262
PN + D F + + + + + P ++ Q T Y PF L+++ SK + A +VH
Sbjct: 60 PNPSRSHDSFIRAAWTRRSRGEAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVVH 119
Query: 263 RVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLE 322
R TSKV+ VA + +KD++ L S + AC VG ++A+R++ D++ V Y PRK E++E
Sbjct: 120 RGTSKVICVATTNAKDLRNSLPSLIDHNACRVVGNLIAERSMEADVYAVAYEPRKDERIE 179
Query: 323 GKLQIVLQAIIDNGV 337
G+L IVL I +NG+
Sbjct: 180 GRLGIVLDTIKENGI 194
>gi|224135983|ref|XP_002327352.1| predicted protein [Populus trichocarpa]
gi|222835722|gb|EEE74157.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 75/117 (64%)
Query: 221 SDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMK 280
S +EK+ ++ Q T Y +PF L+++ S+ ++A ++HR TSKV+ VA + +KD++
Sbjct: 9 SRGELEKKPNKKSWKQRTEMYMKPFLLNVFFSRKFIQAKVMHRGTSKVISVATTNAKDLR 68
Query: 281 FDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
L S + AC VG ++A+R+ D++ + Y PRK E++EGKL IV+ I +NG+
Sbjct: 69 HSLPSLTDHNACRIVGKLIAERSKEADVYAMSYEPRKDERIEGKLGIVIDTIKENGI 125
>gi|297744840|emb|CBI38108.3| unnamed protein product [Vitis vinifera]
Length = 197
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 70/111 (63%)
Query: 227 KRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDST 286
KR ++ Q T Y PF L+++ SK + A ++HR TSKV+ VA + SKD++ L S
Sbjct: 84 KRPSRKSWKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVATTNSKDLRNTLSSL 143
Query: 287 RNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ AC +G ++A+R++ D+ + Y PRK E++EGKL IVL I +NG+
Sbjct: 144 TDHNACRVIGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVLDTIKENGI 194
>gi|225454046|ref|XP_002263231.1| PREDICTED: 50S ribosomal protein L18 [Vitis vinifera]
Length = 183
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 70/111 (63%)
Query: 227 KRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDST 286
KR ++ Q T Y PF L+++ SK + A ++HR TSKV+ VA + SKD++ L S
Sbjct: 70 KRPSRKSWKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVATTNSKDLRNTLSSL 129
Query: 287 RNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ AC +G ++A+R++ D+ + Y PRK E++EGKL IVL I +NG+
Sbjct: 130 TDHNACRVIGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVLDTIKENGI 180
>gi|388509934|gb|AFK43033.1| unknown [Lotus japonicus]
Length = 202
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 70/111 (63%)
Query: 227 KRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDST 286
KR ++ Q T Y PF L+++ SK + A ++HR TSKV+ VA + SKD++ L S
Sbjct: 89 KRPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVMHRGTSKVISVATTNSKDLRNSLPSL 148
Query: 287 RNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ AC VG ++AQR+ D++ + Y PRK E++EGKL IVL I +NG+
Sbjct: 149 TDHDACRVVGRLIAQRSKEADVYALAYEPRKDERIEGKLGIVLDTIKENGI 199
>gi|302760693|ref|XP_002963769.1| hypothetical protein SELMODRAFT_68956 [Selaginella moellendorffii]
gi|300169037|gb|EFJ35640.1| hypothetical protein SELMODRAFT_68956 [Selaginella moellendorffii]
Length = 107
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 66/107 (61%)
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
+F Q + Y PFCLD+++S V A I+HR +VV + SKDM+ L S + +AC
Sbjct: 1 SFRQRSDKYMRPFCLDVHLSSKYVNATIMHRSRGRVVAAVSTNSKDMRATLPSRSDLSAC 60
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
VG LA RA D + V+Y PRK E+LEGKL V++A+ + G++V
Sbjct: 61 RIVGETLADRAKEADCYSVIYIPRKLERLEGKLAAVVEAVANCGISV 107
>gi|302786168|ref|XP_002974855.1| hypothetical protein SELMODRAFT_59025 [Selaginella moellendorffii]
gi|300157750|gb|EFJ24375.1| hypothetical protein SELMODRAFT_59025 [Selaginella moellendorffii]
Length = 107
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 66/107 (61%)
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
+F Q + Y PFCLD+++S V A I+HR +VV + SKDM+ L S + +AC
Sbjct: 1 SFRQRSDKYMRPFCLDVHLSSKYVNATIMHRSRGRVVAAVSTNSKDMRAMLPSRSDLSAC 60
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
VG LA RA D + V+Y PRK E+LEGKL V++A+ + G++V
Sbjct: 61 RIVGETLADRAKEADCYSVIYIPRKLERLEGKLAAVVEAVANCGISV 107
>gi|449531806|ref|XP_004172876.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L18-like
[Cucumis sativus]
Length = 190
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 80/138 (57%), Gaps = 8/138 (5%)
Query: 208 LASRDDEFNKIVM--------SDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRAC 259
AS + + K+++ S + KR ++ Q T Y PF L+++ SK + A
Sbjct: 49 FASSNSSYAKVLLIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFXLNVFFSKKFIHAK 108
Query: 260 IVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGE 319
++HR TSKV+ VA + +KD++ L S + AC +G ++A+R+ D++ + Y PRK E
Sbjct: 109 VMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKDADVYAISYEPRKDE 168
Query: 320 KLEGKLQIVLQAIIDNGV 337
++EGKL IV+ I +NG+
Sbjct: 169 RIEGKLGIVIDTIKENGI 186
>gi|449465411|ref|XP_004150421.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
Length = 190
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 8/138 (5%)
Query: 208 LASRDDEFNKIVM--------SDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRAC 259
AS + + K++ S + KR ++ Q T Y PF L+++ SK + A
Sbjct: 49 FASSNSSYAKVLFIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAK 108
Query: 260 IVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGE 319
++HR TSKV+ VA + +KD++ L S + AC +G ++A+R+ D++ + Y PRK E
Sbjct: 109 VMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDE 168
Query: 320 KLEGKLQIVLQAIIDNGV 337
++EGKL IV+ I +NG+
Sbjct: 169 RIEGKLGIVIDTIKENGI 186
>gi|18402538|ref|NP_566655.1| Ribosomal L18p/L5e family protein [Arabidopsis thaliana]
gi|9293979|dbj|BAB01882.1| unnamed protein product [Arabidopsis thaliana]
gi|21554527|gb|AAM63600.1| unknown [Arabidopsis thaliana]
gi|24030337|gb|AAN41334.1| unknown protein [Arabidopsis thaliana]
gi|222423792|dbj|BAH19862.1| AT3G20230 [Arabidopsis thaliana]
gi|332642829|gb|AEE76350.1| Ribosomal L18p/L5e family protein [Arabidopsis thaliana]
Length = 187
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 73/111 (65%)
Query: 227 KRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDST 286
KR ++ Q T Y PF L+++ S+ + A ++HR TSKV+ VA + ++D++ ++ S
Sbjct: 73 KRPNRKSWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPSL 132
Query: 287 RNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ AC +G ++A+R++ D++ V Y PRKGE++EGKL IV+ I ++G+
Sbjct: 133 VDNEACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 183
>gi|297834952|ref|XP_002885358.1| 50S ribosomal protein L18 family [Arabidopsis lyrata subsp. lyrata]
gi|297331198|gb|EFH61617.1| 50S ribosomal protein L18 family [Arabidopsis lyrata subsp. lyrata]
Length = 187
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 73/111 (65%)
Query: 227 KRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDST 286
KR ++ Q T Y PF L+++ S+ + A ++HR TSKV+ VA + ++D++ ++ S
Sbjct: 73 KRPNRKSWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPSL 132
Query: 287 RNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ AC +G ++A+R++ D++ V Y PRKGE++EGKL IV+ I ++G+
Sbjct: 133 VDNEACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 183
>gi|224145139|ref|XP_002325540.1| predicted protein [Populus trichocarpa]
gi|222862415|gb|EEE99921.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 69/105 (65%)
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
++ Q T Y PF L+++ S+ ++A ++HR TSKVV VA + +KD++ L S + AC
Sbjct: 21 SWKQRTDMYMRPFLLNVFFSRRFIQAKVMHRGTSKVVSVATTNAKDLRHSLPSLTDHNAC 80
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
VG ++A+R+ D++ + Y PRK E++EGKL IV+ I +NG+
Sbjct: 81 RIVGKLIAERSKEADVYAMSYEPRKDERIEGKLGIVIDTIKENGI 125
>gi|226502296|ref|NP_001150881.1| structural constituent of ribosome [Zea mays]
gi|195642592|gb|ACG40764.1| structural constituent of ribosome [Zea mays]
gi|413938308|gb|AFW72859.1| structural constituent of ribosome [Zea mays]
Length = 189
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 72/117 (61%)
Query: 221 SDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMK 280
S E+R ++ Q T Y PF L+++ SK V A ++HR TSKV+ VA + SKD++
Sbjct: 70 SRGEAEQRPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNSKDLR 129
Query: 281 FDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
L S + AC +G ++A+R++ D+ + Y P+K E++EGKL IV+ I ++G+
Sbjct: 130 LTLPSLVDDNACRTIGRLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEHGI 186
>gi|357470487|ref|XP_003605528.1| 50S ribosomal protein L18 [Medicago truncatula]
gi|355506583|gb|AES87725.1| 50S ribosomal protein L18 [Medicago truncatula]
Length = 199
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 71/117 (60%)
Query: 221 SDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMK 280
S EK+ ++ + T Y PF LDI+ SK V A + HR TSKV+ VA + +KD++
Sbjct: 80 SRGEAEKKPSRKSWKRRTDMYMRPFLLDIFFSKKFVHAKVTHRGTSKVICVATTNAKDLR 139
Query: 281 FDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
L S + AC +G ++A+R+ D++ + Y PRK E++EG+L I++ + +NG+
Sbjct: 140 NSLPSLIDPEACRVIGRLIAERSKEADVYAMAYEPRKKERIEGRLGIIIDTVKENGI 196
>gi|41052808|dbj|BAD07676.1| unknown protein [Oryza sativa Japonica Group]
gi|125540732|gb|EAY87127.1| hypothetical protein OsI_08528 [Oryza sativa Indica Group]
gi|125583307|gb|EAZ24238.1| hypothetical protein OsJ_07988 [Oryza sativa Japonica Group]
gi|215704232|dbj|BAG93072.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 181
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 71/112 (63%)
Query: 226 EKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDS 285
E+R ++ Q T Y PF L+++ SK V A +VHR TSKV+ VA + +KD++ L S
Sbjct: 67 EERPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVVHRGTSKVISVASTNAKDLRTTLPS 126
Query: 286 TRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ AC +G ++A+R++ D+ + Y P+K E++EGKL IV+ I ++G+
Sbjct: 127 LVDDNACRTIGRLIAERSMDADVFAMSYEPKKNERIEGKLGIVIDTIKEHGI 178
>gi|357137082|ref|XP_003570130.1| PREDICTED: 50S ribosomal protein L18-like [Brachypodium distachyon]
Length = 185
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 71/117 (60%)
Query: 221 SDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMK 280
S +EK ++ Q T Y PF L+++ SK V A ++HR TSKV+ VA + +KD++
Sbjct: 66 SRGELEKNPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNAKDLR 125
Query: 281 FDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
L S + AC +G ++A+R++ D+ + Y P+K E++EGKL IV+ I + G+
Sbjct: 126 NTLPSLVDENACRTIGRLIAERSMDADVFAMAYEPKKNERVEGKLGIVIDTIKEYGI 182
>gi|413938307|gb|AFW72858.1| hypothetical protein ZEAMMB73_879546 [Zea mays]
Length = 101
Score = 83.2 bits (204), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/97 (40%), Positives = 64/97 (65%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
Y PF L+++ SK V A ++HR TSKV+ VA + SKD++ L S + AC +G ++A
Sbjct: 2 YMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNSKDLRLTLPSLVDDNACRTIGRLIA 61
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+R++ D+ + Y P+K E++EGKL IV+ I ++G+
Sbjct: 62 ERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEHGI 98
>gi|449515551|ref|XP_004164812.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
Length = 150
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%)
Query: 227 KRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDST 286
KR ++ Q T Y PF LD+Y S+ + A ++HR TSKVV A + KD+++ L S
Sbjct: 37 KRGNKKSWKQRTDMYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSP 96
Query: 287 RNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ AC +G ++A+R D+ + Y P E+++ K+ IV+ I +NG+
Sbjct: 97 TDDNACRIIGNLIAERCKEADVFAMSYDPPSMERIQDKVGIVIDTIKENGI 147
>gi|449433155|ref|XP_004134363.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
Length = 221
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%)
Query: 227 KRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDST 286
KR ++ Q T Y PF LD+Y S+ + A ++HR TSKVV A + KD+++ L S
Sbjct: 108 KRGNKKSWKQRTDMYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSP 167
Query: 287 RNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ AC +G ++A+R D+ + Y P E+++ K+ IV+ I +NG+
Sbjct: 168 TDDNACRIIGNLIAERCKEADVFAMSYDPPSMERIQDKVGIVIDTIKENGI 218
>gi|168021383|ref|XP_001763221.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685704|gb|EDQ72098.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 103
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
Y +P+ L ++ S VR+ +VH+ TS VV A S KD++ L +T + A A + ILA
Sbjct: 4 YLKPYELKLHFSNKYVRSMVVHKPTSHTVVAATSQEKDLREQLPATGDVAAAAQIASILA 63
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
R D+ V Y +KGE+ GK++ L ++ +NG+ +
Sbjct: 64 SRLKVKDVPAVTYELKKGERYHGKIKAFLDSLRENGIQL 102
>gi|255585804|ref|XP_002533581.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223526540|gb|EEF28799.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 186
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%)
Query: 225 VEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLD 284
+ KR ++ Q T Y PF L+++ SK + A ++HR TSKV+ VA + +KD++ L
Sbjct: 79 LAKRPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVMHRGTSKVISVATTNAKDLRNTLP 138
Query: 285 STRNATACAAVGGILAQRALADDIHDVVYTPRKG 318
S + AC VG ++A+R+ D++ + Y PRK
Sbjct: 139 SLTDHDACRVVGRLIAERSKEADVYAIAYEPRKN 172
>gi|302785772|ref|XP_002974657.1| hypothetical protein SELMODRAFT_101829 [Selaginella moellendorffii]
gi|300157552|gb|EFJ24177.1| hypothetical protein SELMODRAFT_101829 [Selaginella moellendorffii]
Length = 127
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
+F + + Y P+ L I K S+ A IVHR V + S+D+K L + AC
Sbjct: 2 SFRRESDKYMRPYFLIIDFPKRSIHAKIVHRAQHTTVASVGTNSRDLKAFLPDKTDLAAC 61
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
G +LA+RA D + V + G ++EG+L +V+ +++D G++V
Sbjct: 62 RFTGELLARRAKEADCYAVAFN---GSRVEGRLAVVIDSLVDCGISV 105
>gi|384251778|gb|EIE25255.1| translational machinery component [Coccomyxa subellipsoidea C-169]
Length = 107
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 55/97 (56%)
Query: 243 EPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQR 302
+PF L +++S A ++ R V+ A +I KD++ DL ST + A A VG +LA+R
Sbjct: 10 KPFVLKLFLSNKYTYAQVIRRADGNVLAAASTIEKDLRKDLPSTSDKPASALVGKLLAER 69
Query: 303 ALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
A I V + + G+K GK++ +L ++ + G+ +
Sbjct: 70 AQQAGISAVHWERKYGQKYHGKVKELLASMQEAGLPL 106
>gi|302759893|ref|XP_002963369.1| hypothetical protein SELMODRAFT_80094 [Selaginella moellendorffii]
gi|300168637|gb|EFJ35240.1| hypothetical protein SELMODRAFT_80094 [Selaginella moellendorffii]
Length = 129
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 233 TFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATAC 292
+F + + Y P+ L I K S+ A IVH V + S+D+K L + AC
Sbjct: 2 SFRRESDKYMRPYFLIIDFPKRSIHAKIVHSAQHTTVASVGTNSRDLKAFLPDKTDLAAC 61
Query: 293 AAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
G +LA+RA D + V ++ G ++EG+L +V+ +++D G++V
Sbjct: 62 RFTGELLARRAKEADCYAVAFS---GSRVEGRLAVVIDSLVDCGISV 105
>gi|297812923|ref|XP_002874345.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297320182|gb|EFH50604.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 114
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 54/99 (54%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
Y +P+ L ++ + V A ++H T+ V A S K ++ +D TR+ A A +G IL
Sbjct: 15 YLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITRDVAAAAKIGKILG 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L DI V ++ ++ GK++ V+ ++ + GV +
Sbjct: 75 ERLLMKDIPAVTIQMKREQRYHGKVKAVIDSVREAGVKL 113
>gi|224096087|ref|XP_002310534.1| predicted protein [Populus trichocarpa]
gi|222853437|gb|EEE90984.1| predicted protein [Populus trichocarpa]
Length = 114
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 229 VRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRN 288
VR P Q PY L ++ + V A + H T+ V A S K ++ +++TR+
Sbjct: 7 VRAPRVTQFLKPY----VLKMHFTNQYVNAQVTHSPTATVASAASSQEKALRSTMENTRD 62
Query: 289 ATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
A A +G IL +R L DI V + +K GK++ V+ ++ + G+ +
Sbjct: 63 VAAAAKIGKILGERLLLKDIPAVTVFLNRNQKYHGKVKAVIDSLREVGIKI 113
>gi|351720997|ref|NP_001236427.1| uncharacterized protein LOC100526952 [Glycine max]
gi|255631236|gb|ACU15985.1| unknown [Glycine max]
Length = 114
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 57/99 (57%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
+ +P+ L ++ + V A ++H T+ VV A S K ++ L+++R+ A A +G ILA
Sbjct: 15 FLKPYVLKMHFTNKYVSAQVIHTPTATVVSSASSQEKALRSSLETSRDVAAAAKIGKILA 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L DI V ++ +K GK++ V+ +I + GV +
Sbjct: 75 ERLLLKDIPAVSVHLKREQKYHGKVKAVIDSIREAGVKL 113
>gi|357129656|ref|XP_003566477.1| PREDICTED: 50S ribosomal protein L18-like [Brachypodium distachyon]
Length = 114
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
Y +P+ L ++ S V A ++H T+ V A S K ++ DL+STR+ A A +G +L
Sbjct: 15 YLKPYLLRMHFSNKYVSAQVIHTPTATVACSASSQEKLLRSDLESTRDVAAAAKIGKLLG 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L I V ++ +K GK++ V+ ++ + GV +
Sbjct: 75 ERMLLKGIPAVSIHMKREQKYHGKVRAVIDSVREAGVKL 113
>gi|225450681|ref|XP_002283176.1| PREDICTED: 50S ribosomal protein L18 [Vitis vinifera]
gi|296089732|emb|CBI39551.3| unnamed protein product [Vitis vinifera]
Length = 114
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
+ +P+ L ++ + V A ++H T+ V A S K ++ ++STR+ A A +G IL
Sbjct: 15 FLKPYVLKMHFTNKFVNAQVIHSPTATVASAASSQEKTLRSTMESTRDVAAAAMIGKILG 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKL 343
+R L DI V ++ +K GK ++A+ID+ V +KL
Sbjct: 75 ERLLLQDIPAVTVFLKRDQKYHGK----VKAVIDSLREVGIKL 113
>gi|326527977|dbj|BAJ89040.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 114
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 56/99 (56%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
+ +P+ L ++ S V A ++H T+ V A S K ++ +L+STR+ +A A +G +L
Sbjct: 15 FLKPYLLRMHFSNKYVTAQVIHTPTATVACSASSQEKLLRPNLESTRDVSAAAKIGKLLG 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L I V ++ +K GK++ V+ ++ + GV +
Sbjct: 75 ERLLIKGIPAVSIHMKREQKYHGKVKAVIDSVREAGVKL 113
>gi|255070051|ref|XP_002507107.1| ribosomal protein L18, chloroplast precursor [Micromonas sp.
RCC299]
gi|226522382|gb|ACO68365.1| ribosomal protein L18, chloroplast precursor [Micromonas sp.
RCC299]
Length = 110
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 55/94 (58%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S +V A ++ +V S +V A + K ++ L + N A A+VG ++A+R++A
Sbjct: 17 LLVFFSNRAVYAQVLRKVDSHIVAAASTTEKVLRATLTNLGNEDAAASVGRVVAERSIAA 76
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
IH V + KG++ GKL+ ++ + D G+ +K
Sbjct: 77 GIHVVHFNRPKGKRFHGKLRTLIDNMRDAGLPLK 110
>gi|15241056|ref|NP_198134.1| Ribosomal L18p/L5e family protein [Arabidopsis thaliana]
gi|21554086|gb|AAM63167.1| unknown [Arabidopsis thaliana]
gi|88011066|gb|ABD38897.1| At5g27820 [Arabidopsis thaliana]
gi|332006345|gb|AED93728.1| Ribosomal L18p/L5e family protein [Arabidopsis thaliana]
Length = 114
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
Y +P+ L ++ + V A ++H T+ V A S K ++ +D TR+ A + +G IL
Sbjct: 15 YLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITRDVAAASKIGKILG 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L DI V +K ++ GK++ V+ ++ + GV +
Sbjct: 75 ERLLMKDIPAVTIQMKKEQRYHGKVKAVIDSVREAGVKL 113
>gi|115435738|ref|NP_001042627.1| Os01g0256600 [Oryza sativa Japonica Group]
gi|108792645|dbj|BAE95806.1| unknown protein [Oryza sativa Japonica Group]
gi|113532158|dbj|BAF04541.1| Os01g0256600 [Oryza sativa Japonica Group]
gi|215686647|dbj|BAG88900.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708823|dbj|BAG94092.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 114
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 55/99 (55%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
+ +P+ L ++ S V A +VH T+ V A S K ++ +++STR+ A A +G +L
Sbjct: 15 FLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPNMESTRDVAAAAKIGKLLG 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L I V ++ +K GK++ V+ ++ + GV +
Sbjct: 75 ERLLQKGIPAVCIHMKREQKYHGKVRAVIDSVREAGVKL 113
>gi|147798815|emb|CAN74240.1| hypothetical protein VITISV_043330 [Vitis vinifera]
Length = 241
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
+ +P+ L ++ + V A ++H T+ V A S K ++ ++STR+ A A +G IL
Sbjct: 15 FLKPYVLKMHFTNKFVNAQVIHSPTATVASAASSQEKTLRSTMESTRDVAAAAMIGKILG 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAI 332
+R L DI V ++ +K GK++ V+ ++
Sbjct: 75 ERLLLQDIPAVTVFLKRDQKYHGKVKAVIDSL 106
>gi|226496289|ref|NP_001152098.1| 50S ribosomal protein L18 [Zea mays]
gi|226510381|ref|NP_001150322.1| 50S ribosomal protein L18 [Zea mays]
gi|195608440|gb|ACG26050.1| 50S ribosomal protein L18 [Zea mays]
gi|195609138|gb|ACG26399.1| 50S ribosomal protein L18 [Zea mays]
gi|195638354|gb|ACG38645.1| 50S ribosomal protein L18 [Zea mays]
gi|195652601|gb|ACG45768.1| 50S ribosomal protein L18 [Zea mays]
gi|223943857|gb|ACN26012.1| unknown [Zea mays]
gi|414588054|tpg|DAA38625.1| TPA: 50S ribosomal protein L18 isoform 1 [Zea mays]
gi|414588055|tpg|DAA38626.1| TPA: 50S ribosomal protein L18 isoform 2 [Zea mays]
Length = 114
Score = 52.0 bits (123), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 55/99 (55%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
+ +P+ L ++ S V A +VH T+ V A S K ++ +++STR+ A A +G +L
Sbjct: 15 FLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPNMESTRDVAAAAKIGKLLG 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L I V ++ +K GK++ V+ ++ + GV +
Sbjct: 75 ERLLLKGIPAVSIHMKREQKYHGKVKAVIDSVREAGVKL 113
>gi|125549734|gb|EAY95556.1| hypothetical protein OsI_17403 [Oryza sativa Indica Group]
Length = 114
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 55/99 (55%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
+ +P+ L ++ S V A +VH T+ V A S K ++ +++STR+ A A +G +L
Sbjct: 15 FLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPNMESTRDVAAAAKIGKLLG 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L I V ++ +K GK++ V+ ++ + GV +
Sbjct: 75 ERLLQKGIPAVSIHMKREQKYHGKVRAVIDSVREAGVKL 113
>gi|351703956|gb|EHB06875.1| 39S ribosomal protein L18, mitochondrial [Heterocephalus glaber]
Length = 179
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 260 IVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGE 319
+V +VVV A + +K L STRN AC +VG +LAQR L I+ +VY P E
Sbjct: 92 LVEHWNGRVVVSASTREWAIKKHLYSTRNVVACESVGRVLAQRCLEAGINFMVYQPTPWE 151
Query: 320 KLEGKLQIVLQAIIDNGVNVK 340
++ + A+ + GV ++
Sbjct: 152 AASDSMKCLQSAMTEGGVVLQ 172
>gi|449453185|ref|XP_004144339.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
gi|449480883|ref|XP_004156021.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
Length = 114
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 229 VRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRN 288
++ P Q Y +P+ L ++ + V A ++H T+ V A S K ++ ++STR+
Sbjct: 7 IKPPRLTQ----YLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRD 62
Query: 289 ATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
A A +G +L +R L I V ++ ++ GK++ V+ ++ + G+ +
Sbjct: 63 VAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIKL 113
>gi|226507386|ref|NP_001151709.1| LOC100285345 [Zea mays]
gi|195649205|gb|ACG44070.1| structural constituent of ribosome [Zea mays]
Length = 114
Score = 51.2 bits (121), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 230 RTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNA 289
R P + PY L ++ + + V A ++H T+ V A S K ++ ++STR+
Sbjct: 8 RAPAITKFLKPY----ILKMHFTNSFVSAQVIHTPTATVACSASSQEKLLRPSMESTRDV 63
Query: 290 TACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKL 343
A A +G +L +R L I V + + +K GK ++A+ID+ V VKL
Sbjct: 64 AAAAKIGKLLGERLLFKGIPAVSVSMSRDQKYHGK----VKAVIDSLTGVGVKL 113
>gi|355562179|gb|EHH18811.1| hypothetical protein EGK_15480 [Macaca mulatta]
Length = 179
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ KVVV A + +K L STRN AC ++G +LAQR L
Sbjct: 80 LRVIRTQRHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 138
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + GV ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKPLQSAMTEGGVVLR 172
>gi|426355053|ref|XP_004044952.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Gorilla
gorilla gorilla]
Length = 180
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ + KVVV A + +K L STRN AC ++G +LAQR L
Sbjct: 81 LRVIRTQHHVEALVEHQ-SGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + GV ++
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 173
>gi|332245321|ref|XP_003271809.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Nomascus
leucogenys]
Length = 179
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ KVVV A + +K L STRN AC ++G +LAQR L
Sbjct: 80 LRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 138
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + GV ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 172
>gi|6841380|gb|AAF29043.1|AF161556_1 HSPC071 [Homo sapiens]
gi|119568000|gb|EAW47615.1| mitochondrial ribosomal protein L18, isoform CRA_b [Homo sapiens]
gi|158258731|dbj|BAF85336.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ KVVV A + +K L STRN AC ++G +LAQR L
Sbjct: 80 LRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 138
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + GV ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 172
>gi|388453736|ref|NP_001252787.1| mitochondrial ribosomal protein L18 [Macaca mulatta]
gi|355749009|gb|EHH53492.1| hypothetical protein EGM_14141 [Macaca fascicularis]
gi|380812068|gb|AFE77909.1| 39S ribosomal protein L18, mitochondrial precursor [Macaca mulatta]
gi|383417743|gb|AFH32085.1| 39S ribosomal protein L18, mitochondrial precursor [Macaca mulatta]
gi|384946614|gb|AFI36912.1| 39S ribosomal protein L18, mitochondrial precursor [Macaca mulatta]
Length = 179
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ KVVV A + +K L STRN AC ++G +LAQR L
Sbjct: 80 LRVIRTQRHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 138
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + GV ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 172
>gi|297679542|ref|XP_002817585.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Pongo abelii]
Length = 180
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ KVVV A + +K L STRN AC ++G +LAQR L
Sbjct: 81 LRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + GV ++
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLRSAMTEGGVVLR 173
>gi|21265080|ref|NP_054880.2| 39S ribosomal protein L18, mitochondrial [Homo sapiens]
gi|114610053|ref|XP_001150906.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Pan
troglodytes]
gi|397471746|ref|XP_003807443.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Pan paniscus]
gi|41017797|sp|Q9H0U6.1|RM18_HUMAN RecName: Full=39S ribosomal protein L18, mitochondrial;
Short=L18mt; Short=MRP-L18; Flags: Precursor
gi|12052792|emb|CAB66568.1| hypothetical protein [Homo sapiens]
gi|12804435|gb|AAH01623.1| Mitochondrial ribosomal protein L18 [Homo sapiens]
gi|49065408|emb|CAG38522.1| MRPL18 [Homo sapiens]
gi|117646366|emb|CAL38650.1| hypothetical protein [synthetic construct]
gi|261859654|dbj|BAI46349.1| mitochondrial ribosomal protein L18 [synthetic construct]
gi|410212632|gb|JAA03535.1| mitochondrial ribosomal protein L18 [Pan troglodytes]
gi|410257362|gb|JAA16648.1| mitochondrial ribosomal protein L18 [Pan troglodytes]
gi|410296778|gb|JAA26989.1| mitochondrial ribosomal protein L18 [Pan troglodytes]
gi|410342039|gb|JAA39966.1| mitochondrial ribosomal protein L18 [Pan troglodytes]
Length = 180
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ KVVV A + +K L STRN AC ++G +LAQR L
Sbjct: 81 LRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + GV ++
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 173
>gi|195607984|gb|ACG25822.1| structural constituent of ribosome [Zea mays]
gi|223949055|gb|ACN28611.1| unknown [Zea mays]
gi|414872230|tpg|DAA50787.1| TPA: structural constituent of ribosome isoform 1 [Zea mays]
gi|414872231|tpg|DAA50788.1| TPA: structural constituent of ribosome isoform 2 [Zea mays]
Length = 114
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 230 RTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNA 289
R P + PY L ++ + + V A ++H T+ V A S K ++ ++STR+
Sbjct: 8 RAPAITKFLKPY----ILKMHFTNSFVSAQVIHTPTATVACSASSQEKLLRPSMESTRDV 63
Query: 290 TACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
A A +G +L +R L I V + + +K GK++ V+ ++ GV VK+
Sbjct: 64 AAAAKIGKLLGERLLFKGIPAVSVSMSRDQKYHGKVKAVIDSL--RGVGVKL 113
>gi|345784723|ref|XP_003432596.1| PREDICTED: 39S ribosomal protein L18, mitochondrial isoform 1
[Canis lupus familiaris]
Length = 194
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + HR KVVV A + +K L STRN AC ++G +LA+R L
Sbjct: 95 LRVIKTQHHVEALVEHR-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAERCLEA 153
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I+ +VY P E ++ + A+ + GV
Sbjct: 154 GINFMVYQPTPWEAASDSMKRLQNAMTEGGV 184
>gi|90077032|dbj|BAE88196.1| unnamed protein product [Macaca fascicularis]
Length = 179
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ KVVV A + +K L STRN AC ++G +LAQR L
Sbjct: 80 LRVIGTQRHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 138
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + GV ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 172
>gi|222618129|gb|EEE54261.1| hypothetical protein OsJ_01153 [Oryza sativa Japonica Group]
Length = 150
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
+ +P+ L ++ S V A +VH T+ V A S K ++ +++STR+ A A +G +L
Sbjct: 51 FLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPNMESTRDVAAAAKIGKLLG 110
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L I V ++ +K GK++ V+ ++ + GV +
Sbjct: 111 ERLLQKGIPAVCIHMKREQKYHGKVRAVIDSVREAGVKL 149
>gi|426235015|ref|XP_004011486.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Ovis aries]
Length = 180
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + S+ + A + HR +VVV A + +K L STR+ AC +VG +LAQR L
Sbjct: 81 LRVIRSQHHIEALVEHR-NGQVVVSASTHEWAIKKHLYSTRSVVACESVGRVLAQRCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+I+ GV ++
Sbjct: 140 GINFMVYQPTPWEATSDSMKRLQIAMIEGGVVLQ 173
>gi|357444863|ref|XP_003592709.1| 50S ribosomal protein L18 [Medicago truncatula]
gi|355481757|gb|AES62960.1| 50S ribosomal protein L18 [Medicago truncatula]
Length = 114
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
Y +P+ L ++ + V A ++H T+ V A S K ++ L++TR+ A A +G +LA
Sbjct: 15 YLKPYVLKMHFTNKYVSAQVIHTPTATVASSASSQEKALRSSLETTRDVAAAAKIGKLLA 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R DI V ++ ++ GK++ V+ ++ + GV +
Sbjct: 75 ERLSLKDIPAVSVHLKREQRYHGKVKAVIDSLREAGVRL 113
>gi|345784725|ref|XP_533465.2| PREDICTED: 39S ribosomal protein L18, mitochondrial isoform 2
[Canis lupus familiaris]
Length = 180
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + HR KVVV A + +K L STRN AC ++G +LA+R L
Sbjct: 81 LRVIKTQHHVEALVEHR-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAERCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I+ +VY P E ++ + A+ + GV
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQNAMTEGGV 170
>gi|413923510|gb|AFW63442.1| hypothetical protein ZEAMMB73_021028 [Zea mays]
Length = 177
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 244 PFCLDIYISKASVRACIVHRVTSKVVVVAHSI-SKDMKFDLDSTRNATACAAVGGILAQR 302
P C + SK V A ++HR TSKV+ VA + +KD + L S + AC G ++A+R
Sbjct: 92 PSCSIFFPSKRFVHAKVMHRGTSKVIAVATTNDAKDFRLTLPSLVDDNACRTTGRLIAER 151
Query: 303 ALADDIHDVVYTPRKGEKLE 322
++ D+ + Y P+K E E
Sbjct: 152 SMDADVFALAYEPKKNESRE 171
>gi|296199559|ref|XP_002747209.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Callithrix
jacchus]
Length = 180
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ KVVV A + +K L STRN AC +VG +LAQR L
Sbjct: 81 LRVIRTQHHVEAFVEHQ-NGKVVVSASTREWAIKKYLYSTRNVVACESVGRVLAQRCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I+ +VY P E ++ + A+ + GV
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQSAMTEGGV 170
>gi|242072312|ref|XP_002446092.1| hypothetical protein SORBIDRAFT_06g001630 [Sorghum bicolor]
gi|241937275|gb|EES10420.1| hypothetical protein SORBIDRAFT_06g001630 [Sorghum bicolor]
Length = 114
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 54/99 (54%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
+ +P+ L ++ + V A ++H TS V A S K ++ +++STR+ A +G +L
Sbjct: 15 FLKPYLLRMHFTNKYVSAQVIHTPTSTVACSASSQEKLLRPNMESTRDVAAAVKIGKLLG 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L I V ++ +K GK++ V+ ++ + GV +
Sbjct: 75 ERLLLKGIPAVSIHMKREQKYHGKVKAVIDSVREAGVKL 113
>gi|403284986|ref|XP_003933825.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Saimiri
boliviensis boliviensis]
Length = 180
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
KVVV A + +K L STRN AC +VG +LAQR L I+ +VY P E +
Sbjct: 99 GKVVVSASTREWAIKKHLYSTRNVVACESVGRVLAQRCLEAGINFMVYQPTPWEAASDSM 158
Query: 326 QIVLQAIIDNGV 337
+ + A+ + GV
Sbjct: 159 KRLQSAMTEGGV 170
>gi|157818901|ref|NP_001099675.1| 39S ribosomal protein L18, mitochondrial [Rattus norvegicus]
gi|149027454|gb|EDL83044.1| mitochondrial ribosomal protein L18 (predicted) [Rattus norvegicus]
gi|187469792|gb|AAI67033.1| Mitochondrial ribosomal protein L18 [Rattus norvegicus]
Length = 180
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 260 IVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGE 319
V + +VVV A + +K L STRN AC +VG +LAQR L I+ +VY P E
Sbjct: 93 FVEHLNGQVVVSASTREWAIKKHLYSTRNVVACESVGRVLAQRCLEAGINFMVYQPTPWE 152
Query: 320 KLEGKLQIVLQAIIDNGVNVK 340
++ + A+ ++GV ++
Sbjct: 153 ASSDSIKRLQNAMTESGVMLR 173
>gi|355564128|gb|EHH20628.1| hypothetical protein EGK_03517, partial [Macaca mulatta]
Length = 179
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ KVVV A + +K L STRN AC ++G +LAQR L
Sbjct: 80 LRVIRTQRHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 138
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + G+ ++
Sbjct: 139 GINFMVYQPTPWEAALDSMKPLQSAMTEGGLVLR 172
>gi|388498984|gb|AFK37558.1| unknown [Lotus japonicus]
Length = 114
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
+ +P+ L ++ + V A ++H T+ V A S K ++ L++ R+ A A +G ILA
Sbjct: 15 FLKPYVLRMHFTNKYVSAQVIHTPTATVASSASSQEKALRSSLETKRDVAAAAKIGKILA 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L +I V ++ +K GK++ V+ ++ + GV +
Sbjct: 75 ERLLLKEIPAVSVHLKREQKYHGKVKAVIDSLREAGVKL 113
>gi|119567999|gb|EAW47614.1| mitochondrial ribosomal protein L18, isoform CRA_a [Homo sapiens]
Length = 208
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ KVVV A + +K L STRN AC ++G +LAQR L
Sbjct: 109 LRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 167
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + GV ++
Sbjct: 168 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 201
>gi|90080271|dbj|BAE89617.1| unnamed protein product [Macaca fascicularis]
Length = 179
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ +VVV A + +K L STRN AC ++G +LAQR L
Sbjct: 80 LRVIRTQRHVEALVEHQ-NGEVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 138
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + GV ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 172
>gi|12845393|dbj|BAB26735.1| unnamed protein product [Mus musculus]
Length = 180
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 260 IVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGE 319
V + +VVV A + +K L STRN AC ++G +LAQR L I+ +VY P E
Sbjct: 93 FVEHLNGQVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEAGINFMVYQPTPWE 152
Query: 320 KLEGKLQIVLQAIIDNGVNVK 340
++ + A+ ++GV ++
Sbjct: 153 ASSDSIKRLQNAMTESGVMLR 173
>gi|13385808|ref|NP_080586.1| 39S ribosomal protein L18, mitochondrial [Mus musculus]
gi|41017793|sp|Q9CQL5.1|RM18_MOUSE RecName: Full=39S ribosomal protein L18, mitochondrial;
Short=L18mt; Short=MRP-L18; Flags: Precursor
gi|12833553|dbj|BAB22567.1| unnamed protein product [Mus musculus]
gi|12843022|dbj|BAB25828.1| unnamed protein product [Mus musculus]
gi|15030301|gb|AAH11425.1| Mitochondrial ribosomal protein L18 [Mus musculus]
gi|148670092|gb|EDL02039.1| mitochondrial ribosomal protein L18 [Mus musculus]
Length = 180
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 260 IVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGE 319
V + +VVV A + +K L STRN AC ++G +LAQR L I+ +VY P E
Sbjct: 93 FVEHLNGQVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEAGINFMVYQPTPWE 152
Query: 320 KLEGKLQIVLQAIIDNGVNVK 340
++ + A+ ++GV ++
Sbjct: 153 ASSDSIKRLQNAMTESGVMLR 173
>gi|50725129|dbj|BAD33746.1| hypothetical protein [Oryza sativa Japonica Group]
gi|50726299|dbj|BAD33874.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 291
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 245 FCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR--NATACAAVGGILAQR 302
+ L ++IS V A +V R + +VVV A S+ K ++ L+ R NA A AAVG +LA R
Sbjct: 176 YVLRLFISLKYVTANVVDRQSGRVVVTASSVEKPLRDGLECGRTCNAKAAAAVGEVLAMR 235
Query: 303 ALADDI-HDVVY------TPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
D + + ++ +KG K K+ +L A+ ++GVN+++
Sbjct: 236 LKVDGLAREPIHADATKEVEKKGFKNRTKVWAILNALREHGVNLRL 281
>gi|356551492|ref|XP_003544108.1| PREDICTED: 50S ribosomal protein L18-like [Glycine max]
Length = 114
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
+ +P+ L + + V A ++H T+ V A S K ++ L+++R+ A A +G ILA
Sbjct: 15 FLKPYVLKMNFTNKYVSAQVIHSPTATVASSASSQEKALRSSLETSRDVAAAAKIGKILA 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L +I V ++ +K GK++ V+ ++ + GV +
Sbjct: 75 ERLLLKNIPAVSVHLKREQKYHGKVKAVIDSLREAGVKL 113
>gi|297262095|ref|XP_001086086.2| PREDICTED: 39S ribosomal protein L18, mitochondrial-like [Macaca
mulatta]
Length = 221
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ KVVV A + +K L STRN AC ++G +LAQR L
Sbjct: 122 LRVIRTQRHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 180
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + G+ ++
Sbjct: 181 GINFMVYQPTPWEAALDSMKRLQSAMTEGGLVLR 214
>gi|402868648|ref|XP_003898407.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Papio anubis]
Length = 179
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ KVVV A + +K L STRN AC +G +LAQR L
Sbjct: 80 LRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACENIGRVLAQRCLEA 138
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + GV ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKRLQSAMREGGVVLR 172
>gi|194033401|ref|XP_001928391.1| PREDICTED: hypothetical protein LOC100156324 [Sus scrofa]
Length = 180
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ + A + HR +VVV A + +K L STRN AC +VG +LA+R L
Sbjct: 81 LRVIRTQHHIEALVEHR-NGQVVVSASTREWAIKKHLYSTRNVVACESVGRVLAERCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + GV ++
Sbjct: 140 GINFMVYHPTPWEAASDSIKRLQHAMTEGGVVLR 173
>gi|402863298|ref|XP_003895963.1| PREDICTED: 39S ribosomal protein L18, mitochondrial-like isoform 1
[Papio anubis]
gi|402863300|ref|XP_003895964.1| PREDICTED: 39S ribosomal protein L18, mitochondrial-like isoform 2
[Papio anubis]
Length = 179
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H+ KVVV A + +K L STRN AC +G +LAQR L
Sbjct: 80 LRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACENIGRVLAQRCLEA 138
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + GV ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKRLQSAMREGGVVLR 172
>gi|297727215|ref|NP_001175971.1| Os09g0549700 [Oryza sativa Japonica Group]
gi|255679115|dbj|BAH94699.1| Os09g0549700, partial [Oryza sativa Japonica Group]
Length = 177
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 245 FCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR--NATACAAVGGILAQR 302
+ L ++IS V A +V R + +VVV A S+ K ++ L+ R NA A AAVG +LA R
Sbjct: 62 YVLRLFISLKYVTANVVDRQSGRVVVTASSVEKPLRDGLECGRTCNAKAAAAVGEVLAMR 121
Query: 303 ALADDI-HDVVY------TPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
D + + ++ +KG K K+ +L A+ ++GVN+++
Sbjct: 122 LKVDGLAREPIHADATKEVEKKGFKNRTKVWAILNALREHGVNLRL 167
>gi|311243697|ref|XP_003121157.1| PREDICTED: hypothetical protein LOC100156324 [Sus scrofa]
Length = 188
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ + A + HR +VVV A + +K L STRN AC +VG +LA+R L
Sbjct: 89 LRVIRTQHHIEALVEHR-NGQVVVSASTREWAIKKHLYSTRNVVACESVGRVLAERCLEA 147
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P E ++ + A+ + GV ++
Sbjct: 148 GINFMVYHPTPWEAASDSIKRLQHAMTEGGVVLR 181
>gi|242038475|ref|XP_002466632.1| hypothetical protein SORBIDRAFT_01g011330 [Sorghum bicolor]
gi|241920486|gb|EER93630.1| hypothetical protein SORBIDRAFT_01g011330 [Sorghum bicolor]
Length = 114
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
+ +P+ L ++ + V A ++H T+ V A S K ++ ++STR+ A A +G +L
Sbjct: 15 FLKPYILKMHFTNNFVSAQVIHTPTATVTCSASSQEKLLRPSMESTRDVAAAAKIGKLLG 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L I V + + +K GK++ V+ ++ D GV +
Sbjct: 75 ERLLFKGIPAVSVSISRDQKYHGKVKAVIDSLRDAGVKL 113
>gi|355704303|gb|AES02182.1| mitochondrial ribosomal protein L18 [Mustela putorius furo]
Length = 161
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + HR + +VVV A + +K L STRN AC +VG +LA+R L
Sbjct: 63 LRVIRTQHHVEARVEHR-SGQVVVSASTREWAIKKHLYSTRNVVACESVGRVLAERCLEA 121
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I+ +VY P E ++ + A+ + GV
Sbjct: 122 GINFMVYQPTPWEAASDSIKRLQSAMTEGGV 152
>gi|336421079|ref|ZP_08601239.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 5_1_57FAA]
gi|336002438|gb|EGN32547.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 5_1_57FAA]
Length = 122
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 244 PFC--LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQ 301
P C L ++ S + A I+ +V A ++ KD+K +L+ T N A A +G ++A+
Sbjct: 26 PECPRLAVFRSNNHMYAQIIDDTVGNTLVSASTLQKDVKAELEKTNNVDAAAYLGKVIAE 85
Query: 302 RALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+A+ I DVV+ R G +GK+Q + A + G+N
Sbjct: 86 KAIEKGIKDVVF-DRGGFIYQGKIQALADAAREAGLN 121
>gi|291397220|ref|XP_002715030.1| PREDICTED: mitochondrial ribosomal protein L18 [Oryctolagus
cuniculus]
Length = 180
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 260 IVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGE 319
+V + +VVV A + +K L TRN AC ++G +LAQR L I+ +VY P E
Sbjct: 93 LVEHPSGQVVVSASTREWAIKKHLYRTRNVVACESLGRVLAQRCLEAGINFMVYQPTPWE 152
Query: 320 KLEGKLQIVLQAIIDNGVNVK 340
L+ + A+ + GV ++
Sbjct: 153 AASDSLKCLQNAMTEGGVVLQ 173
>gi|166031643|ref|ZP_02234472.1| hypothetical protein DORFOR_01343 [Dorea formicigenerans ATCC
27755]
gi|346307810|ref|ZP_08849940.1| 50S ribosomal protein L18 [Dorea formicigenerans 4_6_53AFAA]
gi|166028620|gb|EDR47377.1| ribosomal protein L18 [Dorea formicigenerans ATCC 27755]
gi|345904768|gb|EGX74512.1| 50S ribosomal protein L18 [Dorea formicigenerans 4_6_53AFAA]
Length = 122
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ +V A ++ KD+K +L+ T N A A +G ++A++AL
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGNTLVSASTLQKDVKANLEKTNNVDAAAYLGKVIAEKALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I DVV+ R G +GK+Q + A + G+N
Sbjct: 91 GIKDVVF-DRGGFIYQGKIQALADAAREAGLN 121
>gi|431904572|gb|ELK09954.1| 39S ribosomal protein L18, mitochondrial [Pteropus alecto]
Length = 180
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ + A + HR +VVV A + +K L STRN AC ++G +LA R L
Sbjct: 81 LRVVRTQHHIEAVVEHR-NGQVVVSASTREWAIKKYLYSTRNVVACESIGRVLAGRCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I+ +VY P E +Q + A+ + GV
Sbjct: 140 GINFMVYQPTPWEAASDSMQRLRNAMTEGGV 170
>gi|303274572|ref|XP_003056604.1| ribosomal protein L18 [Micromonas pusilla CCMP1545]
gi|226462688|gb|EEH59980.1| ribosomal protein L18 [Micromonas pusilla CCMP1545]
Length = 121
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 55/93 (59%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L I S + V A ++ R + +V A ++ K +K L T + TA + +G ++A+R+ A
Sbjct: 15 LKIVFSNSFVYAQVLRRTDNHIVATASTVEKALKVTLKHTADKTAASVIGKVIAERSNAV 74
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+++ V + +G++ GKL++++ + +G+++
Sbjct: 75 NVNAVYFPKPEGKRFHGKLKVLVDTLRGSGLSL 107
>gi|266620247|ref|ZP_06113182.1| ribosomal protein L18 [Clostridium hathewayi DSM 13479]
gi|288868150|gb|EFD00449.1| ribosomal protein L18 [Clostridium hathewayi DSM 13479]
Length = 122
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ K +V A ++ K++K +L+ T N A A VG ++A+RAL
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGKTLVSASTVEKEVKAELEKTNNVDAAAYVGTVIAKRALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VV+ R G +GK+Q + A + G+
Sbjct: 91 GIKEVVF-DRGGFIYQGKIQALADAAREAGL 120
>gi|427736160|ref|YP_007055704.1| 50S ribosomal protein L18 [Rivularia sp. PCC 7116]
gi|427371201|gb|AFY55157.1| LSU ribosomal protein L18P [Rivularia sp. PCC 7116]
Length = 120
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 227 KRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDST 286
+R+R F P L +Y S ++ A ++ + + A SI ++K L S
Sbjct: 14 RRIRGKVFGSSERPR-----LAVYRSNENIYAQVIDDTNHRTLATASSIEPELKSKLSSG 68
Query: 287 RNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
N A A VG LA RAL I+ VV+ R G G+++ + A + G+N
Sbjct: 69 SNQQASAEVGKTLAARALEKGINQVVF-DRGGNLYHGRVKALADAAREGGLN 119
>gi|354481837|ref|XP_003503107.1| PREDICTED: 39S ribosomal protein L18, mitochondrial-like
[Cricetulus griseus]
Length = 180
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ + A + H+ +VVV A + +K L +TRN AC ++G +LAQR L
Sbjct: 81 LRVIKTQHHIEALVEHQ-NGQVVVSASTREWAIKKHLYNTRNVVACESIGRVLAQRCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I+ +VY P E L+ + A+ ++GV
Sbjct: 140 GINFMVYQPTPWEASSDSLKSLQNAMTESGV 170
>gi|336436025|ref|ZP_08615738.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 1_4_56FAA]
gi|336008065|gb|EGN38084.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 1_4_56FAA]
Length = 122
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+ + P L ++ S + A I+ +V A ++ KD+K +L+ T N A A
Sbjct: 20 NRFSGTAERP-RLAVFRSNNHMYAQIIDDTVGNTLVAASTLQKDVKAELEKTNNVDAAAY 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+G ++A++A+A I +VV+ R G +GK++ + A + G+N
Sbjct: 79 LGKVIAEKAMAKGITEVVF-DRGGFIYQGKIKALADAAREAGLN 121
>gi|432111778|gb|ELK34823.1| 39S ribosomal protein L18, mitochondrial [Myotis davidii]
Length = 180
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + HR +VVV A + +K L ST+N AC +G +LA+R L
Sbjct: 81 LRVIRTQHHVEALVEHR-NGQVVVSASTREWAIKKHLYSTKNVAACENIGRVLAERCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVK 340
I+ +VY P +Q + +A+ + GV ++
Sbjct: 140 GINFMVYQPTPWAAASESMQRLQRAVTEGGVVLR 173
>gi|326493468|dbj|BAJ85195.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 114
Score = 47.4 bits (111), Expect = 0.011, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 230 RTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNA 289
R P + PY L ++ + V A ++H ++ + A S K ++ ++STR+
Sbjct: 8 RAPAITKFLKPY----VLKMHFTNNFVTAQVIHTPSATIACAASSQEKILRPSMESTRDV 63
Query: 290 TACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
A A +G +L +R L I V + + + GK++ V+ ++ GV +
Sbjct: 64 AAAAKIGKLLGERLLFQGIPAVSVSMSRDQTYHGKVKAVIDSLTAAGVKL 113
>gi|255542770|ref|XP_002512448.1| 50S ribosomal protein L18, putative [Ricinus communis]
gi|223548409|gb|EEF49900.1| 50S ribosomal protein L18, putative [Ricinus communis]
Length = 115
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 55/99 (55%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
+ +P+ L ++ + V A ++H ++ V A S K ++ +++TR+ A A +G IL
Sbjct: 16 FLKPYVLKMHFTNKFVSAQVIHSPSATVACSASSQEKALRPSMENTRDVAAAAKIGKILG 75
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L I + ++ +K GK++ V+ ++ ++GV +
Sbjct: 76 ERLLVKGIPAISVFLKREQKYHGKVKAVVDSVRESGVKL 114
>gi|348561159|ref|XP_003466380.1| PREDICTED: 39S ribosomal protein L18, mitochondrial-like [Cavia
porcellus]
Length = 179
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 260 IVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGE 319
+V +VVV A + +K L STRN AC +G +LAQR L ++ +VY P E
Sbjct: 92 LVEHWNGRVVVSASTREWAIKKHLYSTRNVVACETIGRVLAQRCLEAGVNFMVYQPTPWE 151
Query: 320 KLEGKLQIVLQAIIDNGV 337
++ + A+ + G+
Sbjct: 152 AAADSIKRLQNAMTEGGI 169
>gi|444722572|gb|ELW63260.1| 39S ribosomal protein L18, mitochondrial [Tupaia chinensis]
Length = 213
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 260 IVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGE 319
V +VVV A + +K L STRN AC +VG +LA+R L IH +VY P E
Sbjct: 92 FVEHCNGQVVVSASTREWAIKKHLYSTRNVVACESVGRVLAERCLEAGIHFMVYQPTPWE 151
>gi|410960317|ref|XP_003986739.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Felis catus]
Length = 180
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + HR + +VVV A + +K L ST N AC +VG +LA+R L
Sbjct: 81 LRVIRTQHHVEALVEHR-SGQVVVSASTREWAIKKHLYSTTNVVACESVGRVLAERCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I+ +VY P E ++ + A+ + GV
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQSAMTEGGV 170
>gi|302390974|ref|YP_003826794.1| 50S ribosomal protein L18 [Acetohalobium arabaticum DSM 5501]
gi|302203051|gb|ADL11729.1| LSU ribosomal protein L18P [Acetohalobium arabaticum DSM 5501]
Length = 116
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 244 PFC--LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQ 301
PF L +Y S + A ++ ++ + + A + +++ ++D+ N A VG ++A+
Sbjct: 20 PFKPRLSVYRSLKHIYAQLIDDLSGETLAAASTQDPEIRDEIDNGGNVEAAQMVGELIAE 79
Query: 302 RALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
RAL +DI +VV+ R G K G+++ + +A +NG+
Sbjct: 80 RALKEDIKEVVFD-RGGNKYHGRVKALAEAARENGL 114
>gi|77736163|ref|NP_001029780.1| 39S ribosomal protein L18, mitochondrial [Bos taurus]
gi|115502821|sp|Q3ZBR7.1|RM18_BOVIN RecName: Full=39S ribosomal protein L18, mitochondrial;
Short=L18mt; Short=MRP-L18; Flags: Precursor
gi|73587083|gb|AAI03150.1| Mitochondrial ribosomal protein L18 [Bos taurus]
gi|296483859|tpg|DAA25974.1| TPA: 39S ribosomal protein L18, mitochondrial precursor [Bos
taurus]
Length = 180
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + S+ + A + HR +VVV A + +K L ST++ AC +VG +LAQR L
Sbjct: 81 LRVIRSQHHIEALVEHR-NGQVVVSASTREWAIKKHLYSTKSVVACESVGRVLAQRCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I+ +VY P E ++ + +I+ GV
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQIGMIEGGV 170
>gi|154505153|ref|ZP_02041891.1| hypothetical protein RUMGNA_02666 [Ruminococcus gnavus ATCC 29149]
gi|153794632|gb|EDN77052.1| ribosomal protein L18 [Ruminococcus gnavus ATCC 29149]
Length = 122
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+ + P L ++ S + A I+ +V A ++ KD+K +L+ T N A A
Sbjct: 20 NRFSGTAERP-RLAVFRSNNHMYAQIIDDTVGNTLVAASTLEKDVKAELEKTNNVEAAAY 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+G ++A++A A I DVV+ R G +GK++ + A + G+N
Sbjct: 79 LGKVIAEKAKAKGITDVVF-DRGGFIYQGKVKALADAAREAGLN 121
>gi|383787024|ref|YP_005471593.1| 50S ribosomal protein L18 [Fervidobacterium pennivorans DSM 9078]
gi|383109871|gb|AFG35474.1| LSU ribosomal protein L18P [Fervidobacterium pennivorans DSM 9078]
Length = 122
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L +Y S+ + A I+ + +V A ++ KD+K + T N A VG I+A+RALA
Sbjct: 31 LAVYRSEKHIYAQIIDDTVGRTLVAASTVEKDIKERVKKTWNVAAAKEVGKIIAERALAK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G K G+++ + A + G+
Sbjct: 91 GITTVVF-DRGGFKYHGRIKALADAAREAGLK 121
>gi|125564611|gb|EAZ09991.1| hypothetical protein OsI_32294 [Oryza sativa Indica Group]
gi|222642035|gb|EEE70167.1| hypothetical protein OsJ_30243 [Oryza sativa Japonica Group]
Length = 122
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 245 FCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR--NATACAAVGGILAQR 302
+ L ++IS V A +V R + +VVV A S+ K ++ L+ R NA A AAVG +LA R
Sbjct: 7 YVLRLFISLKYVTANVVDRQSGRVVVTASSVEKPLRDGLECGRTCNAKAAAAVGEVLAMR 66
Query: 303 ALADDI-HDVVY------TPRKGEKLEGKLQIVLQAIIDNGVNVKV 341
D + + ++ +KG K K+ +L A+ ++GVN+++
Sbjct: 67 LKVDGLAREPIHADATKEVEKKGFKNRTKVWAILNALREHGVNLRL 112
>gi|218135265|ref|ZP_03464069.1| hypothetical protein BACPEC_03170 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990650|gb|EEC56661.1| ribosomal protein L18 [[Bacteroides] pectinophilus ATCC 43243]
Length = 122
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+ + P L ++ S + A I+ K +V A ++ K++K +L+ T N A A
Sbjct: 20 NRFSGTAERP-RLAVFRSNNHMYAQIIDDTVGKTLVSASTLQKEVKAELEKTNNVDAAAY 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+G ++A+RAL +I VV+ R G +GK+Q + A + G+
Sbjct: 79 LGTVIAKRALEKNITTVVF-DRGGFIYQGKIQALADAAREAGL 120
>gi|149744077|ref|XP_001500689.1| PREDICTED: 39S ribosomal protein L18, mitochondrial-like [Equus
caballus]
Length = 191
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ + A + HR + KVVV A + +K L T+N AC ++G +LA+R L
Sbjct: 81 LRVIKTQHHIEALVEHR-SGKVVVSASTREWAIKKHLYRTKNVVACESIGRVLAERCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I+ +VY P E L+ + A+ + GV
Sbjct: 140 GINFMVYQPTPWEAASDSLKRLQSAMTEGGV 170
>gi|417408270|gb|JAA50696.1| Putative 39s ribosomal protein l18 mitochondrial, partial [Desmodus
rotundus]
Length = 163
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 260 IVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGE 319
+V R + VV A + +K L STR+ AC +VG +LA R L I+ +VY P E
Sbjct: 76 LVERPNGQAVVSASTREWAIKKHLYSTRSVVACESVGRVLAARCLEAGINFMVYQPTPWE 135
Query: 320 KLEGKLQIVLQAIIDNGVNVK 340
+Q + A+ + GV ++
Sbjct: 136 AASDSMQRLQSAMTEGGVVLR 156
>gi|218440638|ref|YP_002378967.1| 50S ribosomal protein L18 [Cyanothece sp. PCC 7424]
gi|226723309|sp|B7KI02.1|RL18_CYAP7 RecName: Full=50S ribosomal protein L18
gi|218173366|gb|ACK72099.1| ribosomal protein L18 [Cyanothece sp. PCC 7424]
Length = 120
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A ++ V +V A ++ KD+K + S A AVG ++AQRALA
Sbjct: 29 LAVFRSNNHIYAQVIDDVAQHTLVAASTLDKDLKGEFSSGATCEASEAVGKLVAQRALAK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G+++ + QA + G++
Sbjct: 89 GIEKVVF-DRGGNLYHGRIRALAQAAREAGLD 119
>gi|154249801|ref|YP_001410626.1| 50S ribosomal protein L18 [Fervidobacterium nodosum Rt17-B1]
gi|171769367|sp|A7HM36.1|RL18_FERNB RecName: Full=50S ribosomal protein L18
gi|154153737|gb|ABS60969.1| ribosomal protein L18 [Fervidobacterium nodosum Rt17-B1]
Length = 122
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 227 KRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDST 286
KR+R F P L ++ S+ + A I+ +V A ++ K MK L T
Sbjct: 16 KRLRKKIFGTPERPR-----LAVFRSEKHMYAQIIDDTKGITLVAASTVEKAMKEKLQKT 70
Query: 287 RNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
N TA VG ++A+RALA I +VV+ R G K G+++ + A + G+
Sbjct: 71 WNITAAKEVGKLIAERALAKGIKEVVF-DRGGFKYHGRVKALADAAREAGLK 121
>gi|26354168|dbj|BAC40714.1| unnamed protein product [Mus musculus]
Length = 114
Score = 46.6 bits (109), Expect = 0.017, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 261 VHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEK 320
V + +VVV A + +K L STRN AC ++G +LAQR L I+ +VY P E
Sbjct: 28 VEHLNGQVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEAGINFMVYQPTPWEA 87
Query: 321 LEGKLQIVLQAIIDNGVNVK 340
++ + A+ ++GV ++
Sbjct: 88 SSDSIKRLQNAMTESGVMLR 107
>gi|307154827|ref|YP_003890211.1| 50S ribosomal protein L18 [Cyanothece sp. PCC 7822]
gi|306985055|gb|ADN16936.1| ribosomal protein L18 [Cyanothece sp. PCC 7822]
Length = 120
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A ++ +V A S+ K++K +L+S N A AVG ++AQRALA
Sbjct: 29 LAVFRSNKHIYAQVIDDAAQHTLVAASSLDKELKTELESGGNCDASVAVGKLVAQRALAK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G+++ + +A + G++
Sbjct: 89 GISAVVF-DRGGNLYHGRVKALAEAAREAGLD 119
>gi|357118555|ref|XP_003561018.1| PREDICTED: 50S ribosomal protein L18-like [Brachypodium distachyon]
Length = 114
Score = 46.2 bits (108), Expect = 0.021, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 52/99 (52%)
Query: 241 YHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILA 300
+ +P+ L ++ + V A ++H ++ + A S K ++ ++STR+ A A +G +L
Sbjct: 15 FLKPYVLKMHFTSNFVSAQVIHTPSATIACAASSQEKILRPSMESTRDVAAAAKIGKLLG 74
Query: 301 QRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
+R L I V + + + GK++ V+ ++ GV +
Sbjct: 75 ERLLFRGIPAVSVSMSRDQTYHGKVKAVIDSLTAAGVKL 113
>gi|404492307|ref|YP_006716413.1| 50S ribosomal protein L18 [Pelobacter carbinolicus DSM 2380]
gi|115504925|sp|Q3A6N1.1|RL18_PELCD RecName: Full=50S ribosomal protein L18
gi|77544414|gb|ABA87976.1| ribosomal protein L18 [Pelobacter carbinolicus DSM 2380]
Length = 122
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ VT K +V A +++ D+ L++T N A AVG +AQ+AL
Sbjct: 31 LCVFRSAKHIYAQIIEDVTGKTLVSASTVNSDVVEGLENTGNVEAAKAVGKAIAQKALGM 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
DI +VV+ R G G+++ + +A + G++
Sbjct: 91 DIKNVVF-DRNGFLYHGRVKTLAEAAREAGLS 121
>gi|428217354|ref|YP_007101819.1| 50S ribosomal protein L18 [Pseudanabaena sp. PCC 7367]
gi|427989136|gb|AFY69391.1| ribosomal protein L18 [Pseudanabaena sp. PCC 7367]
Length = 120
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L I+ S + A ++ V + + A ++ +++K LD+T N A VG ++AQRA+A
Sbjct: 29 LSIFRSNNHIVAQLIDDVAQETLAAASTLEQEIKQGLDTTANCAAATKVGELIAQRAIAK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+++VV+ R G+ G+++ + +A G+
Sbjct: 89 GLNNVVF-DRGGKLYHGRVRALAEAARSGGL 118
>gi|302388072|ref|YP_003823894.1| 50S ribosomal protein L18 [Clostridium saccharolyticum WM1]
gi|302198700|gb|ADL06271.1| ribosomal protein L18 [Clostridium saccharolyticum WM1]
Length = 122
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ K +V A ++ K++K +L+ T + A A VG ++A+RAL
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGKTLVAASTVEKEVKAELEKTNDVDAAAYVGTVVAKRALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VV+ R G +GK+Q + A + G+
Sbjct: 91 GIKEVVF-DRGGFIYQGKIQALADAAREAGL 120
>gi|403388262|ref|ZP_10930319.1| 50S ribosomal protein L18 [Clostridium sp. JC122]
Length = 120
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L +Y S ++ A I+ VT + +V A S+ KD F L + N A AVG ++A++AL
Sbjct: 31 LAVYRSSKNIYAQIIDDVTGRTLVSASSLEKD--FTLKAGSNKDAAKAVGELVAKKALEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VV+ R G G++Q++ + + G+
Sbjct: 89 GIEEVVF-DRGGFVYHGRIQMLAEGAREAGL 118
>gi|153854986|ref|ZP_01996199.1| hypothetical protein DORLON_02205 [Dorea longicatena DSM 13814]
gi|149752483|gb|EDM62414.1| ribosomal protein L18 [Dorea longicatena DSM 13814]
Length = 83
Score = 45.8 bits (107), Expect = 0.032, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 258 ACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRK 317
A I+ +V A ++ KD+K +L+ T N A A +G ++A++AL I DVV+ R
Sbjct: 3 AQIIDDTVGNTLVSASTLQKDVKANLEKTNNVDAAAYLGKVIAEKALEKGIKDVVFD-RG 61
Query: 318 GEKLEGKLQIVLQAIIDNGVN 338
G +GK+Q + A + G+N
Sbjct: 62 GFIYQGKVQALADAAREAGLN 82
>gi|115448011|ref|NP_001047785.1| Os02g0689700 [Oryza sativa Japonica Group]
gi|113537316|dbj|BAF09699.1| Os02g0689700, partial [Oryza sativa Japonica Group]
Length = 58
Score = 45.4 bits (106), Expect = 0.037, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 283 LDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
L S + AC +G ++A+R++ D+ + Y P+K E++EGKL IV+ I ++G+
Sbjct: 1 LPSLVDDNACRTIGRLIAERSMDADVFAMSYEPKKNERIEGKLGIVIDTIKEHGI 55
>gi|254502607|ref|ZP_05114758.1| ribosomal protein L18 [Labrenzia alexandrii DFL-11]
gi|222438678|gb|EEE45357.1| ribosomal protein L18 [Labrenzia alexandrii DFL-11]
Length = 120
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L I+ S + A I+ +V A +I KD+K L + + +A AAVG ++A+RA A
Sbjct: 29 LSIFRSSKQIYAQIIDDAQGHTIVSASTIEKDLKGGLKTGADVSAAAAVGKLVAERAAAA 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ +VV+ R G + G+++ + A + G+
Sbjct: 89 GVKEVVF-DRGGYQYHGRVKALADAAREGGL 118
>gi|16329926|ref|NP_440654.1| 50S ribosomal protein L18 [Synechocystis sp. PCC 6803]
gi|383321669|ref|YP_005382522.1| 50S ribosomal protein L18 [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324838|ref|YP_005385691.1| 50S ribosomal protein L18 [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383490722|ref|YP_005408398.1| 50S ribosomal protein L18 [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384435989|ref|YP_005650713.1| 50S ribosomal protein L18 [Synechocystis sp. PCC 6803]
gi|451814085|ref|YP_007450537.1| 50S ribosomal protein L18 [Synechocystis sp. PCC 6803]
gi|2500284|sp|P73305.1|RL18_SYNY3 RecName: Full=50S ribosomal protein L18
gi|1652412|dbj|BAA17334.1| 50S ribosomal protein L18 [Synechocystis sp. PCC 6803]
gi|339273021|dbj|BAK49508.1| 50S ribosomal protein L18 [Synechocystis sp. PCC 6803]
gi|359270988|dbj|BAL28507.1| 50S ribosomal protein L18 [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359274158|dbj|BAL31676.1| 50S ribosomal protein L18 [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359277328|dbj|BAL34845.1| 50S ribosomal protein L18 [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407957818|dbj|BAM51058.1| 50S ribosomal protein L18 [Bacillus subtilis BEST7613]
gi|451780054|gb|AGF51023.1| 50S ribosomal protein L18 [Synechocystis sp. PCC 6803]
Length = 120
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A ++ V + A ++ D+K L ST A A VG ++AQRA+A
Sbjct: 29 LAVFRSNDHIYAQVIDDVAQHTLAAASTLDPDLKKSLSSTATQEASAEVGKLVAQRAIAK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I+ VV+ R G+ G+++ + +A + G+N
Sbjct: 89 GINQVVF-DRGGKLYHGRVKALAEAAREAGLN 119
>gi|115454743|ref|NP_001050972.1| Os03g0694800 [Oryza sativa Japonica Group]
gi|28273403|gb|AAO38489.1| putative ribosomal protein L18 [Oryza sativa Japonica Group]
gi|108710536|gb|ABF98331.1| ribosomal protein L18 family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108710537|gb|ABF98332.1| ribosomal protein L18 family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108710539|gb|ABF98334.1| ribosomal protein L18 family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549443|dbj|BAF12886.1| Os03g0694800 [Oryza sativa Japonica Group]
gi|215701026|dbj|BAG92450.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193567|gb|EEC75994.1| hypothetical protein OsI_13119 [Oryza sativa Indica Group]
gi|222625607|gb|EEE59739.1| hypothetical protein OsJ_12198 [Oryza sativa Japonica Group]
Length = 114
Score = 45.4 bits (106), Expect = 0.043, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 230 RTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNA 289
R P + PY L ++ + V A ++H ++ V A S K ++ ++STR+
Sbjct: 8 RAPAITKFLKPY----VLKMHFTNNFVSAQVIHTPSATVACSASSQEKLLRPSMESTRDV 63
Query: 290 TACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
A A +G +L +R L I V + + + GK++ V+ ++ GV +
Sbjct: 64 AAAAKIGKLLGERLLFRGIPAVSVSMSRDQTYHGKVRAVMDSLRAAGVKL 113
>gi|384227923|ref|YP_005619668.1| 50S ribosomal protein L18 [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
gi|345538863|gb|AEO08840.1| 50S ribosomal protein L18 [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
Length = 122
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 256 VRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTP 315
+ A I+ + SKV+ A ++ K + L T N A A +G I+A+RAL+ I++V +
Sbjct: 40 IYAQIISSIESKVLAFASTLEKKINCSLKYTGNKEAAAKIGKIIAERALSKGIYNVSF-D 98
Query: 316 RKGEKLEGKLQIVLQAIIDNGV 337
R G K G++Q++ ++ + G+
Sbjct: 99 RSGFKYHGRVQVLAESAREVGL 120
>gi|167759846|ref|ZP_02431973.1| hypothetical protein CLOSCI_02209 [Clostridium scindens ATCC 35704]
gi|167662465|gb|EDS06595.1| ribosomal protein L18 [Clostridium scindens ATCC 35704]
Length = 83
Score = 45.1 bits (105), Expect = 0.048, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 258 ACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRK 317
A I+ +V A ++ KD+K +L+ T N A A +G ++A++A+ I DVV+ R
Sbjct: 3 AQIIDDTVGNTLVSASTLQKDVKAELEKTNNVDAAAYLGKVIAEKAIEKGIKDVVFD-RG 61
Query: 318 GEKLEGKLQIVLQAIIDNGVN 338
G +GK+Q + A + G+N
Sbjct: 62 GFIYQGKIQALADAAREAGLN 82
>gi|390438079|ref|ZP_10226577.1| 50S ribosomal subunit protein L18 [Microcystis sp. T1-4]
gi|389838479|emb|CCI30701.1| 50S ribosomal subunit protein L18 [Microcystis sp. T1-4]
Length = 120
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ V + A ++ ++ +L+ST A AAVG ++AQRAL
Sbjct: 29 LSVFRSNNHIYAQIIDDVAQHTLAAASTLEASLRGELESTATQEASAAVGKLVAQRALER 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G+++ + +A G+N
Sbjct: 89 GIEQVVF-DRGGNLYHGRVKALAEAARSAGLN 119
>gi|336433148|ref|ZP_08612974.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 2_1_58FAA]
gi|336017110|gb|EGN46878.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 2_1_58FAA]
Length = 107
Score = 45.1 bits (105), Expect = 0.050, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ +V A ++ KD+K +L+ T N A A +G ++A++A A
Sbjct: 16 LAVFRSNNHMYAQIIDDTVGNTLVAASTLEKDVKAELEKTNNVEAAAYLGKVIAEKAKAK 75
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I DVV+ R G +GK++ + A + G+N
Sbjct: 76 GITDVVFD-RGGFIYQGKVKALADAAREAGLN 106
>gi|425447766|ref|ZP_18827748.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9443]
gi|425455943|ref|ZP_18835654.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9807]
gi|389731595|emb|CCI04360.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9443]
gi|389803093|emb|CCI17959.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9807]
Length = 120
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ V + A ++ ++ +L+ST A AAVG ++AQRAL
Sbjct: 29 LSVFRSNNHIYAQIIDDVAQHTLAAASTLEATLRGELESTATQEASAAVGKLVAQRALER 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G+++ + +A G+N
Sbjct: 89 GIEQVVF-DRGGNLYHGRVKALAEAARSAGLN 119
>gi|339442868|ref|YP_004708873.1| 50S ribosomal protein L18 [Clostridium sp. SY8519]
gi|338902269|dbj|BAK47771.1| ribosomal protein L18 [Clostridium sp. SY8519]
Length = 122
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 216 NKIVMSDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSI 275
NK S+ V+K +R N L+ P L ++ S + A I+ +V A ++
Sbjct: 3 NKKSRSEVRVKKHMRVR--NHLSGTAERPR-LAVFRSNNHMYAQIIDDTAGNTLVAASTL 59
Query: 276 SKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDN 335
KD+K + T N A A VG +A++ALA I VV+ R G GK+Q + A +
Sbjct: 60 EKDIKAACEKTNNVEAAAKVGEAIAKKALAKGIDTVVF-DRGGFIYHGKVQALADAAREA 118
Query: 336 GVN 338
G+N
Sbjct: 119 GLN 121
>gi|422301326|ref|ZP_16388694.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9806]
gi|425439155|ref|ZP_18819487.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9717]
gi|443664014|ref|ZP_21133337.1| ribosomal protein L18 [Microcystis aeruginosa DIANCHI905]
gi|159028191|emb|CAO89798.1| rplR [Microcystis aeruginosa PCC 7806]
gi|389714957|emb|CCI00545.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9717]
gi|389792294|emb|CCI11965.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9806]
gi|443331716|gb|ELS46361.1| ribosomal protein L18 [Microcystis aeruginosa DIANCHI905]
Length = 120
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ V + A ++ ++ +L+ST A AAVG ++AQRAL
Sbjct: 29 LSVFRSNNHIYAQIIDDVAQHTLAAASTLEATLRGELESTATQEASAAVGKLVAQRALER 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G+++ + +A G+N
Sbjct: 89 GIEQVVF-DRGGNLYHGRVKALAEAARSAGLN 119
>gi|125975400|ref|YP_001039310.1| 50S ribosomal protein L18P [Clostridium thermocellum ATCC 27405]
gi|256005313|ref|ZP_05430279.1| ribosomal protein L18 [Clostridium thermocellum DSM 2360]
gi|281419362|ref|ZP_06250377.1| ribosomal protein L18 [Clostridium thermocellum JW20]
gi|385777836|ref|YP_005687001.1| 50S ribosomal protein L18 [Clostridium thermocellum DSM 1313]
gi|419723241|ref|ZP_14250374.1| ribosomal protein L18 [Clostridium thermocellum AD2]
gi|419727114|ref|ZP_14254120.1| ribosomal protein L18 [Clostridium thermocellum YS]
gi|166218536|sp|A3DJI8.1|RL18_CLOTH RecName: Full=50S ribosomal protein L18
gi|125715625|gb|ABN54117.1| ribosomal protein L18 [Clostridium thermocellum ATCC 27405]
gi|255990749|gb|EEU00865.1| ribosomal protein L18 [Clostridium thermocellum DSM 2360]
gi|281406982|gb|EFB37245.1| ribosomal protein L18 [Clostridium thermocellum JW20]
gi|316939516|gb|ADU73550.1| ribosomal protein L18 [Clostridium thermocellum DSM 1313]
gi|380769519|gb|EIC03433.1| ribosomal protein L18 [Clostridium thermocellum YS]
gi|380780706|gb|EIC10371.1| ribosomal protein L18 [Clostridium thermocellum AD2]
Length = 122
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 227 KRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDST 286
KRVR F P L++Y S ++ A ++ + +V A S+ K++K L
Sbjct: 16 KRVRKKVFGTPERPR-----LNVYRSLTNIYAQVIDDTVGRTLVSASSLEKEIKSKLGYC 70
Query: 287 RNATACAAVGGILAQRALADDIHDVVY 313
N A VG ++AQRALA+ I VV+
Sbjct: 71 GNKQAAREVGKLVAQRALANGIKRVVF 97
>gi|395839109|ref|XP_003792444.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Otolemur
garnettii]
Length = 180
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 279 MKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+K L STRN AC +VG +LAQR L I+ +VY P E + + AI + GV
Sbjct: 112 IKKHLYSTRNVVACESVGRVLAQRCLEAGINFMVYQPTPWEAASDSIIRLKNAITEGGVV 171
Query: 339 VK 340
++
Sbjct: 172 LR 173
>gi|443474830|ref|ZP_21064798.1| LSU ribosomal protein L18P [Pseudanabaena biceps PCC 7429]
gi|443020419|gb|ELS34381.1| LSU ribosomal protein L18P [Pseudanabaena biceps PCC 7429]
Length = 120
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L IY S + A ++ V +V A + D++ L +T N+ A A VG ++A+RA+A
Sbjct: 29 LAIYRSNNHIVAQVIDDVAQHTLVAASTREADVRESLSTTANSEASAKVGALIAERAIAK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G++Q + +A + G++
Sbjct: 89 GITKVVF-DRGGNLYHGRVQALAEAAREAGLD 119
>gi|355681906|ref|ZP_09062194.1| 50S ribosomal protein L18 [Clostridium citroniae WAL-17108]
gi|354811317|gb|EHE95950.1| 50S ribosomal protein L18 [Clostridium citroniae WAL-17108]
Length = 122
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ +V A ++ K++ +L+ T + A A VG ++A+RAL
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGNTLVAASTVEKEVNAELEKTNDKAAAAYVGTVIAKRALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VV+ R G +GK+Q++ A + G+
Sbjct: 91 GIKEVVF-DRGGFIYQGKIQVLADAAREAGL 120
>gi|225027494|ref|ZP_03716686.1| hypothetical protein EUBHAL_01750 [Eubacterium hallii DSM 3353]
gi|224955229|gb|EEG36438.1| ribosomal protein L18 [Eubacterium hallii DSM 3353]
Length = 122
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+++ P L ++ S + A I+ K +V A ++ K++K +L+ T + A A
Sbjct: 20 NRISGTASTP-RLAVFRSNNHMYAQIIDDTVGKTLVSASTVQKEVKAELEKTNDVAAAAH 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+G ++A+RA+ I VV+ R G +GK+Q + A + G+N
Sbjct: 79 LGTVIAKRAIEKGITTVVF-DRGGFIYQGKIQALADAAREAGLN 121
>gi|148243230|ref|YP_001228387.1| 50S ribosomal protein L18 [Synechococcus sp. RCC307]
gi|166199479|sp|A5GVX5.1|RL18_SYNR3 RecName: Full=50S ribosomal protein L18
gi|147851540|emb|CAK29034.1| 50S ribosomal protein L18 [Synechococcus sp. RCC307]
Length = 120
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L +Y S + A ++ + A S+ KD++ L++ N A AVG ++A+RA+A
Sbjct: 29 LAVYRSNEHIYAQVIDDAAQHTLAAASSLDKDLRTSLNNGANCDASTAVGQLVAKRAIAK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G G+++ + +A + G+
Sbjct: 89 GIQQVVFD-RGGNLYHGRVKALAEAAREAGL 118
>gi|411002630|ref|ZP_11378959.1| M23 family peptidase [Streptomyces globisporus C-1027]
Length = 443
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 21/140 (15%)
Query: 157 KSSKTKEGNKDSE------KKEASKAKTDKKECQKKEALKRKSDAKESKRKESPRPNLAS 210
K S T G K +E KKEA K + KKE K++A K+++ K + +KE P P A
Sbjct: 249 KPSATASGPKKAEQRQTGPKKEAPKEQAPKKEAPKQQAPKQEAPKKAAPKKEQPAPERAV 308
Query: 211 RDDEFNKIVMSDDNVEKRVRTPTFNQLTAPYHEPFCLDIYI-SKASVRACIVHRVTSKV- 268
R F+ V + R ++ YH +D + + SV++ RV S
Sbjct: 309 RHPGFSAPVAAGTGTPYR----QAGSWSSGYHT--GVDFPVPTGTSVKSVAPGRVVSAGW 362
Query: 269 -------VVVAHSISKDMKF 281
VV+ HS K ++
Sbjct: 363 AGAYGYEVVIRHSDGKYSQY 382
>gi|166368469|ref|YP_001660742.1| 50S ribosomal protein L18 [Microcystis aeruginosa NIES-843]
gi|425436576|ref|ZP_18817011.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9432]
gi|425462435|ref|ZP_18841909.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9808]
gi|425465078|ref|ZP_18844388.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9809]
gi|425470377|ref|ZP_18849247.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9701]
gi|189041560|sp|B0JHY8.1|RL18_MICAN RecName: Full=50S ribosomal protein L18
gi|166090842|dbj|BAG05550.1| 50S ribosomal protein L18 [Microcystis aeruginosa NIES-843]
gi|389678657|emb|CCH92485.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9432]
gi|389824594|emb|CCI26441.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9808]
gi|389832730|emb|CCI23386.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9809]
gi|389884057|emb|CCI35628.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 9701]
Length = 120
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ V + A ++ ++ +L+ST A AAVG ++AQRAL
Sbjct: 29 LSVFRSNNHIYAQIIDDVAQHTLAAASTLEATLRGELESTATQEASAAVGKLVAQRALDK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G+++ + +A G+N
Sbjct: 89 GIEQVVF-DRGGNLYHGRVKALAEAARSAGLN 119
>gi|336430409|ref|ZP_08610356.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336018218|gb|EGN47970.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 122
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ +V A ++ KD+K +L+ T N A A +G ++A+RAL
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGNTLVSASTLEKDIKAELEKTNNVDAAAYLGTVIAKRALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKL 325
I VVY R G +GK+
Sbjct: 91 GITTVVY-DRGGFIYQGKI 108
>gi|384228477|ref|YP_005620212.1| 50S ribosomal protein L18 [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
gi|345539410|gb|AEO08277.1| 50S ribosomal protein L18 [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
Length = 122
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 218 IVMSDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISK 277
IV+S R+R + L I+ + + A I+ + SKV A ++ K
Sbjct: 2 IVLSKKKTISRIRRSMKTRCKIKKLGAMRLVIHRTSRHMYAQIISSIESKVFAYASTLEK 61
Query: 278 DMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIV 328
++ +L T N A A VG I+A+RAL IH V + R G K G+++++
Sbjct: 62 NINSNLKYTGNKIAAALVGKIIAERALKKGIHCVSF-DRSGFKYHGRIKVL 111
>gi|239623363|ref|ZP_04666394.1| ribosomal protein L18 [Clostridiales bacterium 1_7_47_FAA]
gi|239522329|gb|EEQ62195.1| ribosomal protein L18 [Clostridiales bacterium 1_7_47FAA]
Length = 122
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ +V A ++ K++ +L+ T + A A VG ++A+RAL
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGNTLVAASTVEKEVNAELEKTNDKAAAAYVGTVIAKRALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VV+ R G +GK+Q++ A + G+
Sbjct: 91 GIKEVVF-DRGGFIYQGKVQVLADAAREAGL 120
>gi|440902236|gb|ELR53049.1| 39S ribosomal protein L18, mitochondrial [Bos grunniens mutus]
Length = 180
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + S+ + A + HR +VVV A + +K L ST++ AC +VG +LA R L
Sbjct: 81 LRVIRSQHHIEALVEHR-NGQVVVSASTREWAIKKHLYSTKSVVACESVGRVLALRCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I+ +VY P E ++ + +I+ GV
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQIGMIEGGV 170
>gi|260438200|ref|ZP_05792016.1| ribosomal protein L18 [Butyrivibrio crossotus DSM 2876]
gi|292809392|gb|EFF68597.1| ribosomal protein L18 [Butyrivibrio crossotus DSM 2876]
Length = 122
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ K +V A + K +K +L+ T + A A +G ++A+RAL +
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGKTLVAASTTEKAVKAELEKTNDVAAAAYLGTVIAKRALEN 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VVY R G +GK++ + +A + G+
Sbjct: 91 GISTVVY-DRGGFIYQGKIKALAEAAREAGL 120
>gi|153816234|ref|ZP_01968902.1| hypothetical protein RUMTOR_02483 [Ruminococcus torques ATCC 27756]
gi|317501790|ref|ZP_07959976.1| ribosomal protein L18 [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088689|ref|ZP_08337599.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336439572|ref|ZP_08619183.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 1_1_57FAA]
gi|145846417|gb|EDK23335.1| ribosomal protein L18 [Ruminococcus torques ATCC 27756]
gi|316896823|gb|EFV18908.1| ribosomal protein L18 [Lachnospiraceae bacterium 8_1_57FAA]
gi|330407212|gb|EGG86715.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336015801|gb|EGN45603.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 1_1_57FAA]
Length = 122
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+ + P L ++ S + A I+ +V A ++ KD+K +L+ T N A A
Sbjct: 20 NRFSGTAERPR-LAVFRSNNHMYAQIIDDTVGNTLVAASTLQKDVKAELEKTNNVEAAAC 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+G ++A++A I +VV+ R G +GK++ + A + G+N
Sbjct: 79 LGKVIAEKAKEKGITEVVF-DRGGFIYQGKIKALADAAREAGLN 121
>gi|338730517|ref|YP_004659909.1| 50S ribosomal protein L18P [Thermotoga thermarum DSM 5069]
gi|335364868|gb|AEH50813.1| LSU ribosomal protein L18P [Thermotoga thermarum DSM 5069]
Length = 122
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
R+R F P C +Y S+ + A I+ +V A ++ +++ L T
Sbjct: 17 RIRKKIFG---TPERPRLC--VYRSEKHIYAQIIDDTIGHTLVAASTLDRELAGKLKKTY 71
Query: 288 NATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
N A VG ++AQRALA I VV+ R G K G+++ + A + G+
Sbjct: 72 NIEAAREVGKLIAQRALAKGITQVVF-DRGGFKFHGRVKALADAAREAGLK 121
>gi|333805305|dbj|BAK26451.1| 50S ribosomal protein L18 [Bacillus novalis]
Length = 120
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L+++ S + A ++ ++ V +A + + D +F LDS+ N A AVG ++A+RA+
Sbjct: 31 LNVFRSNKHIYAQVIDDMSG--VTLASASTLDKEFTLDSSNNVEAAKAVGELVAKRAVEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G G++Q++ A +NG+
Sbjct: 89 GISSVVF-DRGGYLYHGRVQVLADAARENGL 118
>gi|428220879|ref|YP_007105049.1| 50S ribosomal protein L18 [Synechococcus sp. PCC 7502]
gi|427994219|gb|AFY72914.1| ribosomal protein L18, bacterial type [Synechococcus sp. PCC 7502]
Length = 120
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + I+ +V A ++ ++K L ST N A A VG ++AQRA+A
Sbjct: 29 LSVFRSNKHIVVQIIDDANQHTLVAASTLESELKTSLSSTANCEASAKVGELIAQRAIAK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G G+++ + +A +G+
Sbjct: 89 GISQVVF-DRGGNLYHGRIEALAEAARASGL 118
>gi|317472021|ref|ZP_07931353.1| ribosomal protein L18 [Anaerostipes sp. 3_2_56FAA]
gi|316900425|gb|EFV22407.1| ribosomal protein L18 [Anaerostipes sp. 3_2_56FAA]
Length = 122
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N ++ +P L ++ S + A I+ +V A ++ KD+K DL+ T + A A
Sbjct: 20 NHISGTAEKP-RLSVFRSNNHMYAQIIDDTVGNTLVSASTLQKDVKADLEKTNDVKAAAH 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+G ++A+RA+A I VV+ R G +GK++ + A + G+
Sbjct: 79 LGKVIAERAVAKGISTVVF-DRGGFIYQGKVKALADAAREAGL 120
>gi|310659486|ref|YP_003937207.1| 50S ribosomal subunit protein L18 [[Clostridium] sticklandii]
gi|308826264|emb|CBH22302.1| 50S ribosomal subunit protein L18 [[Clostridium] sticklandii]
Length = 122
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L++Y S ++ IV + +V A +I K++K L ST N A VG + A+RAL
Sbjct: 31 LNVYRSTNNIYVQIVDDINRITLVSASTIDKELKGTLSSTSNKDAAKKVGELAAKRALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G G++Q + +A+ + G+
Sbjct: 91 GIDTVVF-DRGGYIYHGRIQELAEALREAGL 120
>gi|225571569|ref|ZP_03780565.1| hypothetical protein CLOHYLEM_07667 [Clostridium hylemonae DSM
15053]
gi|225159646|gb|EEG72265.1| hypothetical protein CLOHYLEM_07667 [Clostridium hylemonae DSM
15053]
Length = 83
Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 258 ACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRK 317
A I+ +V A ++ KD+K +L+ T + A A +G ++A++A+ I DVV+ R
Sbjct: 3 AQIIDDTVGSTLVAASTLQKDVKANLEKTNDVKAAAYLGKVIAEKAIEKGIKDVVFD-RG 61
Query: 318 GEKLEGKLQIVLQAIIDNGVN 338
G +GK+Q + A + G+N
Sbjct: 62 GFIYQGKVQALADAAREAGLN 82
>gi|225387222|ref|ZP_03756986.1| hypothetical protein CLOSTASPAR_00974 [Clostridium asparagiforme
DSM 15981]
gi|225046701|gb|EEG56947.1| hypothetical protein CLOSTASPAR_00974 [Clostridium asparagiforme
DSM 15981]
Length = 83
Score = 43.5 bits (101), Expect = 0.15, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 258 ACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRK 317
A I+ +V A ++ KD+K +L+ T + A A VG ++A+RAL I +VV+ R
Sbjct: 3 AQIIDDTVGNTLVAASTVEKDVKSELEKTNDKAAAAYVGTVIAKRALEKGIKEVVFD-RG 61
Query: 318 GEKLEGKLQIVLQAIIDNGVN 338
G +GK+Q + A + G++
Sbjct: 62 GFIYQGKIQALADAAREAGLD 82
>gi|325663046|ref|ZP_08151496.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 4_1_37FAA]
gi|331086653|ref|ZP_08335730.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470500|gb|EGC73730.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 4_1_37FAA]
gi|330409819|gb|EGG89254.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 122
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 224 NVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDL 283
N +R+R N+ + P L ++ S + A I+ K +V A ++ K++K +L
Sbjct: 13 NKHRRLR----NRFSGTAERP-RLAVFRSNNHMYAQIIDDTVGKTLVSASTLQKEVKAEL 67
Query: 284 DSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ T N A A +G ++A+RA+ I+ VV+ R G +GK++ + A + G+
Sbjct: 68 EKTNNVDAAAYLGTVIAKRAIEKGINTVVF-DRGGFIYQGKIKALADAAREAGL 120
>gi|325261510|ref|ZP_08128248.1| ribosomal protein L18 [Clostridium sp. D5]
gi|324032964|gb|EGB94241.1| ribosomal protein L18 [Clostridium sp. D5]
Length = 122
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+ + P L ++ S + A I+ +V A ++ KD+K +L+ T N A A
Sbjct: 20 NRFSGTAERP-RLAVFRSNNHMYAQIIDDTVGNTLVAASTLQKDVKAELEKTNNVEAAAQ 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+G ++A++A I +VV+ R G +GK++ + A + G+N
Sbjct: 79 LGKVIAEKAKEKGITEVVF-DRGGFIYQGKVKALADAAREAGLN 121
>gi|218245125|ref|YP_002370496.1| 50S ribosomal protein L18 [Cyanothece sp. PCC 8801]
gi|257058150|ref|YP_003136038.1| 50S ribosomal protein L18 [Cyanothece sp. PCC 8802]
gi|226723310|sp|B7K233.1|RL18_CYAP8 RecName: Full=50S ribosomal protein L18
gi|218165603|gb|ACK64340.1| ribosomal protein L18 [Cyanothece sp. PCC 8801]
gi|256588316|gb|ACU99202.1| ribosomal protein L18 [Cyanothece sp. PCC 8802]
Length = 120
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 244 PFC--LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQ 301
P C L ++ S + A I+ V + A ++ D+K L S A AAVG ++A+
Sbjct: 24 PNCPRLAVFRSNLHIYAQIIDDVGQHTIAAASTVEPDLKKSLSSGSTCEASAAVGKLVAE 83
Query: 302 RALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
RALA I VV+ R G G+++ + A + G+
Sbjct: 84 RALAQGIEQVVFD-RGGNLYHGRVKALADAAREAGLQ 119
>gi|205372053|ref|ZP_03224870.1| 50S ribosomal protein L18 [Bacillus coahuilensis m4-4]
Length = 120
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
RVR+ ++T P L+I+ S + A ++ V V VA + + D + LDST
Sbjct: 17 RVRS----KITGTAERP-RLNIFRSSKHIYAQLIDDVNG--VTVASASTLDKELSLDSTS 69
Query: 288 NATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
NA A VG ++A+RA+ VV+ R G G++Q + A +NG+
Sbjct: 70 NADAATQVGALVAKRAVEKGFKSVVF-DRGGYLYHGRVQALADAARENGL 118
>gi|258646036|ref|ZP_05733505.1| ribosomal protein L18 [Dialister invisus DSM 15470]
gi|260403407|gb|EEW96954.1| ribosomal protein L18 [Dialister invisus DSM 15470]
Length = 121
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S A++ A ++ T +V A+S+ K+ K D N A AVG ++A+RALA
Sbjct: 30 LSVFRSLANIYAQVIDDTTGTTLVAANSLDKEFKADFPYGGNIEAARAVGELVAKRALAK 89
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G G+++ + + + G+
Sbjct: 90 GIDTVVF-DRGGNIYHGRVKALAEGAREAGL 119
>gi|424862730|ref|ZP_18286643.1| ribosomal protein L18 [SAR86 cluster bacterium SAR86A]
gi|400757351|gb|EJP71562.1| ribosomal protein L18 [SAR86 cluster bacterium SAR86A]
Length = 115
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 220 MSDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDM 279
MS+ N+ R+R +++ E L ++ S A I + +KV+V A ++ KD+
Sbjct: 1 MSEKNIS-RIRRAKKSRIHIRDQESPRLTVFRSSKHFYAQIFDSLGAKVIVSASTVEKDL 59
Query: 280 KFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
K D + N VG +A+RAL + I VV+ R G K G+++ + + D G+
Sbjct: 60 KIDAN---NVAGAKEVGKRVAERALENGIKKVVF-DRSGYKYHGRIKALADSARDAGL 113
>gi|301779940|ref|XP_002925384.1| PREDICTED: 39S ribosomal protein L18, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 180
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + ++ V A + H +VVV A + +K L T+N AC ++G +LA+R L
Sbjct: 81 LRVIRTQHHVEALVEHH-NGQVVVSASTREWAIKKHLYCTKNVVACESIGRVLAERCLEA 139
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I+ +VY P E ++ + A+ + GV
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQSAMTEGGV 170
>gi|291549403|emb|CBL25665.1| LSU ribosomal protein L18P [Ruminococcus torques L2-14]
Length = 122
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+ + P L ++ S + A I+ +V A ++ K++K +L+ T + A A
Sbjct: 20 NRFSGTAQRP-RLAVFRSNNHMYAQIIDDTVGNTLVSASTLQKEVKAELEKTNDVEAAAY 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+G ++A+RA A I +VV+ R G +GK++ + A + G+N
Sbjct: 79 LGKVIAERAKAKGIDEVVF-DRGGFIYQGKIKALADAAREAGLN 121
>gi|312115703|ref|YP_004013299.1| 50S ribosomal protein L18 [Rhodomicrobium vannielii ATCC 17100]
gi|311220832|gb|ADP72200.1| ribosomal protein L18 [Rhodomicrobium vannielii ATCC 17100]
Length = 120
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S ++ A I+ + A S+ D K +L + A AAVG +LA+RA+
Sbjct: 29 LSVFRSSKNIYAQIIDDTKGYTLASASSLDADFKSNLSKGTDVAAAAAVGKLLAERAIKA 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I DVV+ R G G+++ + A + G+N
Sbjct: 89 GIKDVVF-DRGGYMYHGRVKALADAAREAGLN 119
>gi|197303828|ref|ZP_03168864.1| hypothetical protein RUMLAC_02567 [Ruminococcus lactaris ATCC
29176]
gi|197297121|gb|EDY31685.1| ribosomal protein L18 [Ruminococcus lactaris ATCC 29176]
Length = 122
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+ + P L ++ S + A I+ +V A ++ K++K +L+ T + A A
Sbjct: 20 NRFSGTTQRP-RLAVFRSNNHMYAQIIDDTVGNTLVSASTLQKEVKAELEKTNDVNAAAY 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+G ++A+RA+ I +VV+ R G +GK++ + A + G+N
Sbjct: 79 LGKVIAERAIEKGITEVVF-DRGGFIYQGKIKALADAAREAGLN 121
>gi|443329310|ref|ZP_21057897.1| ribosomal protein L18, bacterial type [Xenococcus sp. PCC 7305]
gi|442791052|gb|ELS00552.1| ribosomal protein L18, bacterial type [Xenococcus sp. PCC 7305]
Length = 120
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A ++ V V A ++ ++K DL ST A +AVG ++AQRAL
Sbjct: 29 LCVFRSHKHIYAQVIDDVAQNTVAAASTLDSEVKSDLKSTSTCEASSAVGKLVAQRALEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+ VV+ R G G++Q + +A + G++
Sbjct: 89 GVTKVVF-DRGGNLYHGRIQSLAEAAREAGLD 119
>gi|167748446|ref|ZP_02420573.1| hypothetical protein ANACAC_03190 [Anaerostipes caccae DSM 14662]
gi|167652438|gb|EDR96567.1| ribosomal protein L18 [Anaerostipes caccae DSM 14662]
Length = 122
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N ++ +P L ++ S + A I+ +V A ++ KD+K DL+ T + A A
Sbjct: 20 NHISGTAEKP-RLSVFRSNNHMYAQIIDDTVGNTLVSASTLQKDVKADLEKTDDVKAAAH 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+G ++A+RA+A I VV+ R G +GK++ + A + G+
Sbjct: 79 LGKVIAERAVAKGISTVVF-DRGGFIYQGKVKALADAAREAGL 120
>gi|358066892|ref|ZP_09153381.1| 50S ribosomal protein L18 [Johnsonella ignava ATCC 51276]
gi|356694931|gb|EHI56583.1| 50S ribosomal protein L18 [Johnsonella ignava ATCC 51276]
Length = 122
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ + A +I K++K +++ T N A A VG ++A+RA+
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGNTIASASTIEKELKSEIEKTNNVDAAARVGTLVAKRAIEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G +GK+Q + A + G+
Sbjct: 91 GIEKVVF-DRGGYLYQGKVQALADAAREAGL 120
>gi|94676868|ref|YP_588792.1| 50S ribosomal protein L18 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|115504870|sp|Q1LTC2.1|RL18_BAUCH RecName: Full=50S ribosomal protein L18
gi|94220018|gb|ABF14177.1| ribosomal protein L18 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 115
Score = 42.7 bits (99), Expect = 0.25, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 256 VRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTP 315
+ A I+ SKV++ A ++ K + L +T N A AVG +A+RALA I++V +
Sbjct: 33 IYAQIIAPHNSKVLIAASTVEKMIANQLKNTGNKEAAVAVGKKIAERALAQGIYNVSFD- 91
Query: 316 RKGEKLEGKLQIVLQAIIDNGVN 338
R G + G++Q + +A + G+N
Sbjct: 92 RSGYQYHGRVQALAEAAREVGLN 114
>gi|425452026|ref|ZP_18831845.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 7941]
gi|440752684|ref|ZP_20931887.1| ribosomal protein L18 [Microcystis aeruginosa TAIHU98]
gi|389766372|emb|CCI07994.1| 50S ribosomal subunit protein L18 [Microcystis aeruginosa PCC 7941]
gi|440177177|gb|ELP56450.1| ribosomal protein L18 [Microcystis aeruginosa TAIHU98]
Length = 120
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ V + A ++ ++ +L ST A AAVG ++AQRAL
Sbjct: 29 LSVFRSNNHIYAQIIDDVAQHTLAAASTLEATLRGELASTATQEASAAVGKLVAQRALDK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G+++ + +A G+N
Sbjct: 89 GIEQVVF-DRGGNLYHGRVKALAEAARSAGLN 119
>gi|254468856|ref|ZP_05082262.1| ribosomal protein L18 [beta proteobacterium KB13]
gi|207087666|gb|EDZ64949.1| ribosomal protein L18 [beta proteobacterium KB13]
Length = 118
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L +Y S ++ A ++ T+KV+ A ++ DM+ L T + A A +G +A++A
Sbjct: 27 LTVYRSNLNIYAQVIDGATNKVLASASTVEADMRKKLKKTSDIAAAAEIGKRIAEKAKKA 86
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ DV + R G + G+++ + A +NG+
Sbjct: 87 GVEDVAF-DRSGYRYHGRIKALADAARENGL 116
>gi|160941054|ref|ZP_02088392.1| hypothetical protein CLOBOL_05947 [Clostridium bolteae ATCC
BAA-613]
gi|357055010|ref|ZP_09116088.1| 50S ribosomal protein L18 [Clostridium clostridioforme 2_1_49FAA]
gi|158436003|gb|EDP13770.1| hypothetical protein CLOBOL_05947 [Clostridium bolteae ATCC
BAA-613]
gi|355383710|gb|EHG30787.1| 50S ribosomal protein L18 [Clostridium clostridioforme 2_1_49FAA]
Length = 122
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ +V A ++ K++ +L+ T + A A VG ++A+RAL
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGNTLVAASTVEKEVNAELEKTNDKAAAAYVGTVIAKRALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VV+ R G +GK+Q + A + G+
Sbjct: 91 GIKEVVF-DRGGFIYQGKVQALADAAREAGL 120
>gi|138893800|ref|YP_001124253.1| 50S ribosomal protein L18 [Geobacillus thermodenitrificans NG80-2]
gi|196251008|ref|ZP_03149690.1| ribosomal protein L18 [Geobacillus sp. G11MC16]
gi|166218548|sp|A4IJK4.1|RL18_GEOTN RecName: Full=50S ribosomal protein L18
gi|134265313|gb|ABO65508.1| Ribosomal protein L18 [Geobacillus thermodenitrificans NG80-2]
gi|196209480|gb|EDY04257.1| ribosomal protein L18 [Geobacillus sp. G11MC16]
Length = 120
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
R+R F P L ++ S + A I+ V S +V A ++ K+ F LDST
Sbjct: 17 RIRKKIFGTAERPR-----LSVFRSNKHIYAQIIDDVKSATIVSASTLDKE--FSLDSTN 69
Query: 288 NATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
N A VG ++A+RAL I VV+ R G G+++ + A + G+
Sbjct: 70 NIDAAKKVGELVAKRALEKGIKQVVF-DRGGYLYHGRVKALADAAREAGL 118
>gi|160881769|ref|YP_001560737.1| 50S ribosomal protein L18 [Clostridium phytofermentans ISDg]
gi|189041547|sp|A9KJH8.1|RL18_CLOPH RecName: Full=50S ribosomal protein L18
gi|160430435|gb|ABX43998.1| ribosomal protein L18 [Clostridium phytofermentans ISDg]
Length = 122
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ +V A ++ K +K +L+ T + A A +G ++A++AL
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGNTLVSASTLEKGVKAELEKTNDVAAAAMLGTVIAKKALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G +GK+Q + +A + G+N
Sbjct: 91 GITTVVF-DRGGFIYQGKVQALAEAAREAGLN 121
>gi|150396223|ref|YP_001326690.1| 50S ribosomal protein L18 [Sinorhizobium medicae WSM419]
gi|166218859|sp|A6U875.1|RL18_SINMW RecName: Full=50S ribosomal protein L18
gi|150027738|gb|ABR59855.1| ribosomal protein L18 [Sinorhizobium medicae WSM419]
Length = 120
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S ++ A I+ V K + A ++ D++F L + + A AVG +LA+RA
Sbjct: 29 LSVHRSSKNIYAQIIDDVAGKTIASASTLDTDLRFSLKTGADTEAATAVGKLLAERASKA 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+ DVV+ R G+++ + +A + G+N
Sbjct: 89 GVKDVVF-DRGAFIYHGRIKALAEAAREGGLN 119
>gi|226323026|ref|ZP_03798544.1| hypothetical protein COPCOM_00798 [Coprococcus comes ATCC 27758]
gi|225208593|gb|EEG90947.1| ribosomal protein L18 [Coprococcus comes ATCC 27758]
Length = 122
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+ + P L ++ S + A I+ +V A ++ KD+K +L+ T N A A
Sbjct: 20 NRFSGTAERP-RLAVFRSNNHMYAQIIDDTVGNTLVSASTLQKDVKAELEKTNNVEAAAY 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+G ++A++A+ I VV+ R G GK++ + A + G+N
Sbjct: 79 LGTVIAKKAIEKGITSVVF-DRGGFIYHGKIKALADAAREAGLN 121
>gi|45644712|gb|AAS73100.1| predicted ribosomal protein L18 [uncultured marine gamma
proteobacterium EBAC20E09]
Length = 115
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L +Y S A I + +KV+V A + KD K D + N A A+VG +A+RAL +
Sbjct: 27 LSVYRSSQHFYAQIFDSLGTKVIVSASTAEKDSK---DKSNNIEAAASVGKRVAERALEN 83
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G K G+++ + ++ + G+
Sbjct: 84 GIKKVVF-DRSGYKYHGRIKALAESAREAGL 113
>gi|426400718|ref|YP_007019690.1| 50S ribosomal protein L18 [Candidatus Endolissoclinum patella L2]
gi|425857386|gb|AFX98422.1| ribosomal protein L18 [Candidatus Endolissoclinum patella L2]
Length = 136
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S ++ A I++ V +V A SI K++K L + + TA AVG +LA R +
Sbjct: 45 LSVFRSSKNIYAQIINLVDGNTIVSASSIDKELKGRLKTGADKTAAQAVGRLLALRGIEK 104
Query: 307 DIHDVVY 313
+ DVV+
Sbjct: 105 GLRDVVF 111
>gi|194477043|ref|YP_002049222.1| 50S ribosomal protein L18 [Paulinella chromatophora]
gi|171192050|gb|ACB43012.1| 50S ribosomal protein L18 [Paulinella chromatophora]
Length = 121
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + + A I+ + + A S+ K+++ DL N A AVG ++A+RALA
Sbjct: 30 LAVFRSNSHIYAQIIDDIAQNTLCAASSLDKNLRTDLKVGSNCEASVAVGELVAKRALAK 89
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G G+++ + A G+
Sbjct: 90 GIQKVVF-DRGGNIYHGRVKALADAARQAGL 119
>gi|386712482|ref|YP_006178804.1| 50S ribosomal protein L18 [Halobacillus halophilus DSM 2266]
gi|384072037|emb|CCG43527.1| 50S ribosomal protein L18 [Halobacillus halophilus DSM 2266]
Length = 120
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 218 IVMSDDNVEK-----RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVA 272
I +D NV + RVR F P L++Y S + A +++ + V VA
Sbjct: 2 ITKADKNVVRKKRHARVRKNVFGTAERP-----RLNVYRSNKHIYAQLINDESQ--VTVA 54
Query: 273 HSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAI 332
+ + + FDLD T N A VG +LA+RA+ D+ +D+V R G G+++ + +A
Sbjct: 55 SASTMENGFDLDVTGNVEAAQRVGELLAKRAV-DNGYDIVVFDRGGYLYHGRVKALAEAA 113
Query: 333 IDNGV 337
+ G+
Sbjct: 114 REAGL 118
>gi|333805337|dbj|BAK26467.1| 50S ribosomal protein L18 [Bacillus vietnamensis]
Length = 120
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
RVR+ T P L+++ S ++ A ++ + +V A S KD F+LDS+
Sbjct: 17 RVRSKITGTETRPR-----LNVFRSNKNIYAQLIDDMNGVTLVSASSQDKD--FNLDSSA 69
Query: 288 NATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
A A VG ++A+RA+ + VV+ R G G+++ + +A +NG+
Sbjct: 70 TTDAAAKVGELVAKRAVEKGLKSVVF-DRGGYLYHGRIKALAEAARENGL 118
>gi|167767787|ref|ZP_02439840.1| hypothetical protein CLOSS21_02322 [Clostridium sp. SS2/1]
gi|317497079|ref|ZP_07955406.1| ribosomal protein L18 [Lachnospiraceae bacterium 5_1_63FAA]
gi|429762520|ref|ZP_19294909.1| ribosomal protein L18 [Anaerostipes hadrus DSM 3319]
gi|167710526|gb|EDS21105.1| ribosomal protein L18 [Clostridium sp. SS2/1]
gi|291558872|emb|CBL37672.1| LSU ribosomal protein L18P [butyrate-producing bacterium SSC/2]
gi|316895624|gb|EFV17779.1| ribosomal protein L18 [Lachnospiraceae bacterium 5_1_63FAA]
gi|429181510|gb|EKY22669.1| ribosomal protein L18 [Anaerostipes hadrus DSM 3319]
Length = 122
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ +V A + KD+K +L+ T + A + +G ++A+RALA
Sbjct: 31 LSVFRSNDHMYAQIIDDTVGNTLVSASTTQKDVKAELEKTNDVAAASYLGKVIAERALAK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VV+ R G GK++ + A + G+
Sbjct: 91 GITEVVF-DRGGFIYHGKIEALADAAREAGL 120
>gi|428768906|ref|YP_007160696.1| 50S ribosomal protein L18 [Cyanobacterium aponinum PCC 10605]
gi|428683185|gb|AFZ52652.1| LSU ribosomal protein L18P [Cyanobacterium aponinum PCC 10605]
Length = 122
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLD--STRNATACAAVGGILAQRAL 304
L ++ S + A I+ V +V A ++ K+++ L ST N A A VG ++AQRAL
Sbjct: 29 LAVFRSNFHIYAQIIDDVAQHTLVAASTLDKELREKLKDASTSNCDASAEVGKLIAQRAL 88
Query: 305 ADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+ I VV+ R G G+++ + A ++G+N
Sbjct: 89 SKGIDKVVF-DRGGNLYHGRVKALADAARESGLN 121
>gi|365157310|ref|ZP_09353584.1| 50S ribosomal protein L18 [Bacillus smithii 7_3_47FAA]
gi|363625456|gb|EHL76495.1| 50S ribosomal protein L18 [Bacillus smithii 7_3_47FAA]
Length = 120
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
RVRT P L++Y S + A ++ + A ++ KD FDL+ST
Sbjct: 17 RVRTKISGTSARPR-----LNVYRSNKHIYAQLIDDTKGVTLASASTLEKD--FDLESTG 69
Query: 288 NATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
N A A VG ++A++A+ I VV+ R G G+++ + A +NG+
Sbjct: 70 NVEAAAKVGELIAKKAVEKGITSVVF-DRGGYLYHGRVKALADAARENGL 118
>gi|428773992|ref|YP_007165780.1| 50S ribosomal protein L18 [Cyanobacterium stanieri PCC 7202]
gi|428688271|gb|AFZ48131.1| LSU ribosomal protein L18P [Cyanobacterium stanieri PCC 7202]
Length = 120
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A ++ V + A ++ K+++ L S+ N A A VG ++AQRAL+
Sbjct: 29 LAVFRSNLHIYAQLIDDVAQHTLASASTLDKELRDKLGSSSNCDASAEVGKLVAQRALSK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G+++ + A + G+N
Sbjct: 89 GIEKVVF-DRGGNLYHGRVKALADAARETGLN 119
>gi|269792778|ref|YP_003317682.1| 50S ribosomal protein L18 [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100413|gb|ACZ19400.1| ribosomal protein L18 [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 113
Score = 42.0 bits (97), Expect = 0.47, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 244 PFC--LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQ 301
P C L ++ S + A I+ +V A ++ KD++ +L ST N A VG LA+
Sbjct: 17 PECPRLAVFGSLKHIYAQIIDDQAGHTLVSASTMEKDLRAELKSTGNQDAARQVGKRLAE 76
Query: 302 RALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
RALA I VV+ R G G+++ + +A + G+
Sbjct: 77 RALAKGITTVVFD-RGGHMYHGRVKALAEAAREAGL 111
>gi|350269384|ref|YP_004880692.1| 50S ribosomal protein L18 [Oscillibacter valericigenes Sjm18-20]
gi|348594226|dbj|BAK98186.1| 50S ribosomal protein L18 [Oscillibacter valericigenes Sjm18-20]
Length = 119
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 227 KRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDST 286
KRVR+ AP L+++ S+A++ A I+ V + +V A S+ K++
Sbjct: 16 KRVRSKISGTAVAPR-----LNVFRSEANIYAQIIDDVKGETLVAASSLDKEIA---GYG 67
Query: 287 RNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
N A +AVG ++A+RA A I +VV+ R G G++Q + + G+
Sbjct: 68 GNIAAASAVGKLVAERAKAKGIENVVFD-RGGYLYHGRVQALADGAREGGL 117
>gi|238922845|ref|YP_002936358.1| 50S ribosomal protein L18 [Eubacterium rectale ATCC 33656]
gi|259646100|sp|C4ZBT4.1|RL18_EUBR3 RecName: Full=50S ribosomal protein L18
gi|238874517|gb|ACR74224.1| 50S ribosomal protein L18 [Eubacterium rectale ATCC 33656]
gi|291523746|emb|CBK89333.1| LSU ribosomal protein L18P [Eubacterium rectale DSM 17629]
gi|291528788|emb|CBK94374.1| LSU ribosomal protein L18P [Eubacterium rectale M104/1]
Length = 122
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N L P L ++ S + A I+ +V A ++ KD+K +L+ T N A A
Sbjct: 20 NHLAGTAQRP-RLAVFRSNNHMYAQIIDDTVGNTLVSASTLDKDIKAELEKTNNVDAAAK 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+G ++A++AL I VV+ R G GK++ + +A + G++
Sbjct: 79 LGTVIAKKALDKGISTVVF-DRGGFIYAGKVKALAEAAREAGLD 121
>gi|434400526|ref|YP_007134530.1| ribosomal protein L18 [Stanieria cyanosphaera PCC 7437]
gi|428271623|gb|AFZ37564.1| ribosomal protein L18 [Stanieria cyanosphaera PCC 7437]
Length = 120
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S V A I+ V + A ++ +K +L S A AAVG ++AQRAL
Sbjct: 29 LSVFRSNQHVYAQIIDDVAQHTLAAASTLDSGLKTELSSRATCEASAAVGKLVAQRALEQ 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G+++ + +A + G++
Sbjct: 89 GITKVVF-DRGGNLYHGRIKALAEAAREAGLD 119
>gi|149184160|ref|ZP_01862482.1| 50S ribosomal protein L18 [Bacillus sp. SG-1]
gi|148848132|gb|EDL62460.1| 50S ribosomal protein L18 [Bacillus sp. SG-1]
Length = 120
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
RVR+ ++T P L++Y S ++ A ++ V V +A + + D + +LDST
Sbjct: 17 RVRS----KITGTEQRP-RLNVYRSNKNIYAQLIDDVNG--VTLASASTVDKEINLDSTA 69
Query: 288 NATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
N A A VG ++A+RA + VV+ R G G+++ + A +NG+
Sbjct: 70 NVDAAAQVGELIAKRATEKGLKSVVF-DRGGYLYHGRVKALADAARENGL 118
>gi|327475249|gb|AEA77219.1| LSU ribosomal protein L18p [Bacillus aquimaris]
Length = 120
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
RVR+ T P L+++ S ++ A ++ + V +A + SKD F L++T
Sbjct: 17 RVRSKITGTETRPR-----LNVFRSNKNIYAQLIDDMNG--VTLASASSKDNDFGLETTS 69
Query: 288 NATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
A A VG ++A+RA+ + VV+ R G G+++ + +A +NG+
Sbjct: 70 TVDAAAKVGELIAKRAVEKGLKSVVF-DRGGYLYHGRIKALAEAARENGL 118
>gi|210611141|ref|ZP_03288755.1| hypothetical protein CLONEX_00945 [Clostridium nexile DSM 1787]
gi|210152128|gb|EEA83135.1| hypothetical protein CLONEX_00945 [Clostridium nexile DSM 1787]
Length = 122
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+ + P L ++ S + A I+ +V A ++ KD+K +L+ T N A A
Sbjct: 20 NRFSGTAERP-RLAVFRSNNHMYAQIIDDTVGTTLVSASTVQKDVKAELEKTNNVDAAAY 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+G ++A++A+ I+ VV+ R G +GK++ + A + G+
Sbjct: 79 LGTVIAKKAIEKGINTVVF-DRGGFIYQGKIKALADAAREAGL 120
>gi|452994835|emb|CCQ93499.1| ribosomal protein L18 [Clostridium ultunense Esp]
Length = 122
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
RVR + P L++Y S + + A ++ V +V A ++ K++K L ST
Sbjct: 17 RVRQKVYGTPERP-----RLNVYRSNSHIYAQVIDDVEGHTLVSASTLDKELKEKLSSTH 71
Query: 288 NATACAAVGGILAQRALADDIHDVVY 313
N A VG ++ +RAL I VV+
Sbjct: 72 NKEAAKLVGELVGKRALEKGIDKVVF 97
>gi|383788785|ref|YP_005473354.1| 50S ribosomal protein L18 [Caldisericum exile AZM16c01]
gi|381364422|dbj|BAL81251.1| 50S ribosomal protein L18 [Caldisericum exile AZM16c01]
Length = 122
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 227 KRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDST 286
KR+R F + P L ++IS V A ++ + +V A ++ KD+K +
Sbjct: 16 KRIRKKVFGTESKPR-----LSLFISLKHVYAQLIDDEHGRTLVSASTLDKDLKETVKDM 70
Query: 287 RNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKL 343
AVG ++A+RALA I VV+ R G K G+ ++A+ D N +K
Sbjct: 71 SLTEKAKAVGKLIAERALAKGIETVVF-DRSGYKYHGR----VKALADEARNAGLKF 122
>gi|357419502|ref|YP_004932494.1| 50S ribosomal protein L18 [Thermovirga lienii DSM 17291]
gi|355396968|gb|AER66397.1| LSU ribosomal protein L18P [Thermovirga lienii DSM 17291]
Length = 122
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A ++ +V A ++ K+++ L ST++ A AVG ++A+RAL
Sbjct: 31 LAVFRSLNHIYAQMIDDTVGHTLVSASTLDKELRDKLASTKDTEAAKAVGELIAKRALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNV 339
I + V+ R G K G+++ + +A + G+ +
Sbjct: 91 GIKEAVF-DRGGHKFHGRVKALAEAARNAGLKI 122
>gi|374623973|ref|ZP_09696464.1| 50S ribosomal protein L18 [Ectothiorhodospira sp. PHS-1]
gi|373943065|gb|EHQ53610.1| 50S ribosomal protein L18 [Ectothiorhodospira sp. PHS-1]
Length = 117
Score = 41.6 bits (96), Expect = 0.63, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 256 VRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTP 315
V A I+ S+V+ A ++ D++ L ST N A AAVG ++A+RA+A I V +
Sbjct: 35 VYAQIIAPSGSEVLTCASTVEADVRGGLKSTGNIEAAAAVGRLIAERAVAKGIKKVAFD- 93
Query: 316 RKGEKLEGKLQIVLQAIIDNGV 337
R G K G+++ + A + G+
Sbjct: 94 RSGFKYHGRVKALADAAREGGL 115
>gi|331091651|ref|ZP_08340485.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 2_1_46FAA]
gi|330403408|gb|EGG82967.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 2_1_46FAA]
Length = 122
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+ + P L ++ S + A I+ +V A ++ K++K +L+ T N A A
Sbjct: 20 NRFSGTAERP-RLAVFRSNNHMYAQIIDDTVGNTLVSASTLQKEVKAELEKTNNVDAAAY 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+G ++A+RA+ I+ VV+ R G +GK++ + A + G+
Sbjct: 79 LGTVIAKRAIEKGINTVVF-DRGGFIYQGKIKALADAAREAGL 120
>gi|160894739|ref|ZP_02075514.1| hypothetical protein CLOL250_02290 [Clostridium sp. L2-50]
gi|156863673|gb|EDO57104.1| ribosomal protein L18 [Clostridium sp. L2-50]
Length = 122
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 216 NKIVMSDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSI 275
NK S+ ++K +R N L P L ++ S + A I+ +V A ++
Sbjct: 3 NKESRSEVRIKKHMRVR--NHLAGTADRP-RLAVFRSNNHMYAQIIDDSVGNTIVAASTV 59
Query: 276 SKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDN 335
K +K L+ T N A A VG ++A+RAL I VV+ R G +GK+Q + A +
Sbjct: 60 EKSIKEALEQTDNVDAAAYVGKVVAERALEKGIKTVVF-DRGGFIYQGKVQALADAAREA 118
Query: 336 GV 337
G+
Sbjct: 119 GL 120
>gi|347751577|ref|YP_004859142.1| 50S ribosomal protein L18 [Bacillus coagulans 36D1]
gi|347584095|gb|AEP00362.1| ribosomal protein L18 [Bacillus coagulans 36D1]
Length = 120
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L+IY S ++ A ++ V +A + + D + L+ST NA A VG ++A+RA+
Sbjct: 31 LNIYRSNKNIYAQLIDDANG--VTLASASTLDKELSLESTGNAEAAQKVGELIAKRAMEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VV+ R G G+++ + A +NG+
Sbjct: 89 GIKEVVF-DRGGYLYHGRVKALADAARENGL 118
>gi|283796542|ref|ZP_06345695.1| ribosomal protein L18 [Clostridium sp. M62/1]
gi|291075956|gb|EFE13320.1| ribosomal protein L18 [Clostridium sp. M62/1]
gi|295092560|emb|CBK78667.1| LSU ribosomal protein L18P [Clostridium cf. saccharolyticum K10]
Length = 122
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ +V A + K +K +L T N A A VG ++A+RAL
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGNTLVAASTAEKAVKAELAKTNNVEAAAYVGTVIAKRALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G +GK+Q + A + G+
Sbjct: 91 GIKTVVF-DRGGFIYQGKVQALADAAREAGL 120
>gi|132724|sp|P09415.1|RL18_BACST RecName: Full=50S ribosomal protein L18; AltName: Full=BL22
gi|46015056|pdb|1OVY|A Chain A, Solution Structure Of Ribosomal Protein L18 From Bacillus
Stearothermophilus
Length = 120
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
R+R F P L ++ S + A I+ S +V A ++ K+ F LDST
Sbjct: 17 RIRKKIFGTTERPR-----LSVFRSNKHIYAQIIDDTKSATIVSASTLDKE--FGLDSTN 69
Query: 288 NATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
N A VG ++A+RAL I VV+ R G G+++ + A + G+
Sbjct: 70 NIEAAKKVGELVAKRALEKGIKQVVF-DRGGYLYHGRVKALADAAREAGL 118
>gi|347760272|ref|YP_004867833.1| 50S ribosomal protein L18 [Gluconacetobacter xylinus NBRC 3288]
gi|347579242|dbj|BAK83463.1| LSU ribosomal protein L18P [Gluconacetobacter xylinus NBRC 3288]
Length = 120
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S ++ A ++ + + A S+ KD++ L + TA AVG +LA+RA+A
Sbjct: 29 LSVFRSGKNIYAQVIDDAAGRTLAAASSLEKDLRSALKGGTDVTAAGAVGKLLAERAVAA 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+ VV+ R G+++ + +A + G++
Sbjct: 89 GVSKVVF-DRGAYLYHGRIKALAEAAREGGLS 119
>gi|239825709|ref|YP_002948333.1| 50S ribosomal protein L18 [Geobacillus sp. WCH70]
gi|259646103|sp|C5D3T3.1|RL18_GEOSW RecName: Full=50S ribosomal protein L18
gi|239806002|gb|ACS23067.1| ribosomal protein L18 [Geobacillus sp. WCH70]
Length = 120
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
RVR F P L+++ S + A I+ + + +V A ++ K+ FDL+ST
Sbjct: 17 RVRKKIFGTAERPR-----LNVFRSNKHIYAQIIDDMKAVTIVSASTLDKE--FDLESTG 69
Query: 288 NATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
N A VG ++A+RAL I VV+ R G G+++ + A + G+
Sbjct: 70 NIEAAKKVGELVAKRALEKGIKKVVF-DRGGYLYHGRVKALADAAREAGL 118
>gi|335042307|ref|ZP_08535334.1| ribosomal protein L18 [Methylophaga aminisulfidivorans MP]
gi|333788921|gb|EGL54803.1| ribosomal protein L18 [Methylophaga aminisulfidivorans MP]
Length = 117
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 243 EPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQR 302
E + L ++ + + A ++ +SKV+ A ++ ++K DL +T N A AVG +A+R
Sbjct: 22 EVYRLTVHRTPRHIYAQVLTHDSSKVIATASTLDAEVKKDLKATGNIDAATAVGKAIAER 81
Query: 303 ALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
A + +V + R G + G+++ + A +NG+
Sbjct: 82 AAKQGVTEVAF-DRSGFRYHGRVKALADAARENGLQ 116
>gi|56418657|ref|YP_145975.1| 50S ribosomal protein L18 [Geobacillus kaustophilus HTA426]
gi|261417623|ref|YP_003251305.1| 50S ribosomal protein L18 [Geobacillus sp. Y412MC61]
gi|297528498|ref|YP_003669773.1| 50S ribosomal protein L18 [Geobacillus sp. C56-T3]
gi|375006936|ref|YP_004980566.1| 50S ribosomal protein L18 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448236431|ref|YP_007400489.1| 50S ribosomal protein L18 [Geobacillus sp. GHH01]
gi|73621597|sp|Q5L3S3.1|RL18_GEOKA RecName: Full=50S ribosomal protein L18
gi|56378499|dbj|BAD74407.1| 50S ribosomal protein L18 [Geobacillus kaustophilus HTA426]
gi|261374080|gb|ACX76823.1| ribosomal protein L18 [Geobacillus sp. Y412MC61]
gi|297251750|gb|ADI25196.1| ribosomal protein L18 [Geobacillus sp. C56-T3]
gi|359285782|gb|AEV17466.1| 50S ribosomal protein L18 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445205273|gb|AGE20738.1| 50S ribosomal protein L18 [Geobacillus sp. GHH01]
Length = 120
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
R+R F P L ++ S + A I+ S +V A ++ K+ F LDST
Sbjct: 17 RIRKKIFGTAERPR-----LSVFRSNKHIYAQIIDDTKSSTIVSASTLDKE--FGLDSTN 69
Query: 288 NATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
N A VG ++A+RAL I VV+ R G G+++ + A + G+
Sbjct: 70 NIEAAKKVGELVAKRALEKGIKKVVF-DRGGYLYHGRVKALADAAREAGL 118
>gi|347533181|ref|YP_004839944.1| 50S ribosomal protein L18 [Roseburia hominis A2-183]
gi|345503329|gb|AEN98012.1| 50S ribosomal protein L18 [Roseburia hominis A2-183]
Length = 122
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 223 DNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFD 282
+N +R+R + L P L ++ S + A I+ +V A ++ KD+K +
Sbjct: 12 ENKHRRMR----HHLVGTAERP-RLAVFRSNNHMYAQIIDDTVGNTLVSASTLEKDVKAE 66
Query: 283 LDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
L+ T N A A +G ++A++AL I+ VV+ R G +GK++ + A + G+
Sbjct: 67 LEKTNNVEAAAKLGTVIAKKALDKGINTVVF-DRGGFIYQGKVKALADAAREAGL 120
>gi|302669977|ref|YP_003829937.1| 50S ribosomal protein L18 [Butyrivibrio proteoclasticus B316]
gi|302394450|gb|ADL33355.1| ribosomal protein L18 RplR [Butyrivibrio proteoclasticus B316]
Length = 122
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S V A ++ V K +V A ++ KD+K +L +T + A +G ++A+RAL
Sbjct: 31 LAVFRSNNHVYAQVIDDVAGKTLVSASTLEKDIKAELKNTDDIDAATKIGDVVAKRALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQA 331
I VV+ R G GK++ + +A
Sbjct: 91 GIKAVVF-DRGGYIYHGKVEALAEA 114
>gi|372487037|ref|YP_005026602.1| 50S ribosomal protein L18 [Dechlorosoma suillum PS]
gi|359353590|gb|AEV24761.1| ribosomal protein L18, bacterial type [Dechlorosoma suillum PS]
Length = 118
Score = 41.2 bits (95), Expect = 0.83, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ + + + A ++ SKV+ A S+ +++ DL + N A AA+G ++A+RA
Sbjct: 27 LCVFRTNSHIYAQVISPCGSKVLAAASSLEPEVRKDLPNGGNVNAAAAIGKLIAERAKKA 86
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I V + R G + G+++ + +A +NG+
Sbjct: 87 GIEQVAFD-RAGFQYHGRVKALAEAARENGL 116
>gi|188584852|ref|YP_001916397.1| 50S ribosomal protein L18 [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349539|gb|ACB83809.1| LSU ribosomal protein L18P [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 121
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L++Y S ++ A ++ +V A ++ ++K D N A AAVG ++A+R+
Sbjct: 30 LNVYRSAKNIHAQVIDDNRGHTLVHASTLDPEIKDDYQGKNNQEASAAVGRLIAKRSKDK 89
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I DV++ R G G+++ + +A + G+N
Sbjct: 90 GIEDVIFD-RGGYLYHGRVKALAEAAREEGLN 120
>gi|143423|gb|AAA22702.1| ribosomal protein L18 [Geobacillus stearothermophilus]
Length = 120
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
R+R F P L ++ S + A I+ S +V A ++ K+ F LDST
Sbjct: 17 RIRKKIFGTTERPR-----LSVFRSNKHIYAQIIDDTKSATIVSASTLDKE--FGLDSTN 69
Query: 288 NATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNG 336
N A VG ++A+RAL I VV+ R G G+++ + A + G
Sbjct: 70 NIEAAKKVGELVAKRALEKGIKQVVF-DRGGYLYHGRVKALADAAREAG 117
>gi|154483172|ref|ZP_02025620.1| hypothetical protein EUBVEN_00873 [Eubacterium ventriosum ATCC
27560]
gi|149735980|gb|EDM51866.1| ribosomal protein L18 [Eubacterium ventriosum ATCC 27560]
Length = 122
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ K +V A + + K L+ T N A A VG ++A+RA+
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGKTLVSASTNEPEAKKALEKTNNVEAAAYVGKVIAERAIEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VVY R G +GK+Q + A + G+
Sbjct: 91 GIKEVVY-DRGGFIYQGKVQALADAAREAGL 120
>gi|114570329|ref|YP_757009.1| 50S ribosomal protein L18 [Maricaulis maris MCS10]
gi|122315797|sp|Q0ANR6.1|RL18_MARMM RecName: Full=50S ribosomal protein L18
gi|114340791|gb|ABI66071.1| LSU ribosomal protein L18P [Maricaulis maris MCS10]
Length = 120
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L +Y S ++ A I+ + K VV A S+ + + + + A VG ++A+RA+ +
Sbjct: 29 LSVYRSSKNIYAQIIDDASGKTVVAASSLEEAAQKEHGKGWDTKAAELVGKLIAERAVKE 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+ DVV+ R G G+++ + +A + G+N
Sbjct: 89 GVKDVVF-DRGGYIFHGRVKALAEAAREGGLN 119
>gi|323483285|ref|ZP_08088675.1| hypothetical protein HMPREF9474_00424 [Clostridium symbiosum
WAL-14163]
gi|323691217|ref|ZP_08105493.1| ribosomal protein L18 [Clostridium symbiosum WAL-14673]
gi|355626512|ref|ZP_09048787.1| 50S ribosomal protein L18 [Clostridium sp. 7_3_54FAA]
gi|323403383|gb|EGA95691.1| hypothetical protein HMPREF9474_00424 [Clostridium symbiosum
WAL-14163]
gi|323504736|gb|EGB20522.1| ribosomal protein L18 [Clostridium symbiosum WAL-14673]
gi|354820832|gb|EHF05237.1| 50S ribosomal protein L18 [Clostridium sp. 7_3_54FAA]
Length = 122
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ +V A + K +K +L+ T N A A VG ++A+RA+
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGNTLVAASTAEKAIKAELEKTNNVDAAAYVGTVIAKRAIEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VV+ R G GK+Q + A + G+
Sbjct: 91 GIKEVVF-DRGGFIYHGKVQALADAAREAGL 120
>gi|163815991|ref|ZP_02207361.1| hypothetical protein COPEUT_02171 [Coprococcus eutactus ATCC 27759]
gi|158448801|gb|EDP25796.1| ribosomal protein L18 [Coprococcus eutactus ATCC 27759]
Length = 122
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+L P L ++ S + A I+ K +V A + K +K +L+ T + A A
Sbjct: 20 NRLAGTTERP-RLAVFRSNNHMYAQIIDDSVGKTLVAASTTEKAIKDELEKTDDVDAAAY 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
VG ++A+RAL I V+Y R G GK+Q + A + G+
Sbjct: 79 VGKVIAERALEKGIKTVIY-DRGGFVYHGKVQALADAAREAGL 120
>gi|452994629|emb|CCQ93734.1| ribosomal protein L18 [Clostridium ultunense Esp]
Length = 122
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 218 IVMSDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISK 277
I +D N E++VR + HE L+++ S + A ++ +V A ++
Sbjct: 2 ITKTDKNKERKVRHLRIRRKLHGTHERPRLNVFRSNKHIYAQLIDDQAGVTLVSASTLDP 61
Query: 278 DMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQ 326
++K ++++ N A VG ++A+RAL I VV+ R G G+++
Sbjct: 62 ELKGEIENGGNIEAAEKVGALIAKRALEKGITQVVFD-RGGYPYHGRVK 109
>gi|336112812|ref|YP_004567579.1| 50S ribosomal protein L18 [Bacillus coagulans 2-6]
gi|335366242|gb|AEH52193.1| ribosomal protein L18 [Bacillus coagulans 2-6]
Length = 120
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L+IY S ++ A ++ V V +A + + D + L+ST N A VG ++A+RA+
Sbjct: 31 LNIYRSNKNIYAQLIDDVNG--VTLASASTLDKELSLESTGNVEAAQKVGELIAKRAVEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VV+ R G G+++ + A +NG+
Sbjct: 89 GIKEVVF-DRGGYLYHGRIKALADAARENGL 118
>gi|255505610|ref|ZP_05347176.3| ribosomal protein L18 [Bryantella formatexigens DSM 14469]
gi|255266914|gb|EET60119.1| ribosomal protein L18 [Marvinbryantia formatexigens DSM 14469]
Length = 83
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 258 ACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRK 317
A I+ +V A ++ K++K +L+ T N A A +G ++A+RAL I VV+ R
Sbjct: 3 AQIIDDSVGNTLVSASTLQKEVKAELEKTNNVDAAAYLGKVIAERALEKGIKTVVFD-RG 61
Query: 318 GEKLEGKLQIVLQAIIDNGV 337
G +GK+Q + A + G+
Sbjct: 62 GFIYQGKIQALADAAREAGL 81
>gi|428181653|gb|EKX50516.1| hypothetical protein GUITHDRAFT_103748 [Guillardia theta CCMP2712]
Length = 760
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 136 FYKLDKDSKEFE--EYSFDFHRRKSSKTKEGN-KDSEKKEASKAKTDKKECQKKEALKRK 192
++L++ KE E E RK ++ KE K++E+KEA + + ++KE ++KEA +R+
Sbjct: 344 IHRLEEQRKEAERKEAERREAERKEAERKEAERKEAERKEAERKEAERKEAERKEAERRE 403
Query: 193 SDAKESKRKESPR 205
++ KE++RKE+ R
Sbjct: 404 AERKEAERKEAER 416
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 156 RKSSKTKEGN-KDSEKKEASKAKTDKKECQKKEALKRKSDAKESKRKESPRPNLASRDDE 214
RK ++ KE K++E+KEA + + +++E ++KEA +++++ KE++RKE+ R ++ E
Sbjct: 376 RKEAERKEAERKEAERKEAERKEAERREAERKEAERKEAERKEAERKEAERKEAERKEAE 435
Query: 215 FNKIVMSDD 223
K + +D
Sbjct: 436 RQKQIAQND 444
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 51/81 (62%)
Query: 125 EIDNMRIRGDLFYKLDKDSKEFEEYSFDFHRRKSSKTKEGNKDSEKKEASKAKTDKKECQ 184
++D+ R+ + ++ EE + R+++ + + K++E+KEA + + ++KE +
Sbjct: 326 QVDSARMETQKKMEQQEEIHRLEEQRKEAERKEAERREAERKEAERKEAERKEAERKEAE 385
Query: 185 KKEALKRKSDAKESKRKESPR 205
+KEA +++++ KE++R+E+ R
Sbjct: 386 RKEAERKEAERKEAERREAER 406
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 156 RKSSKTKEGN-KDSEKKEASKAKTDKKECQKKEALKRKSDAKESKRKESPRPNLASRDDE 214
RK ++ KE K++E++EA + + ++KE ++KEA +++++ KE++RKE+ R +++D
Sbjct: 386 RKEAERKEAERKEAERREAERKEAERKEAERKEAERKEAERKEAERKEAERQKQIAQNDA 445
Query: 215 FNK 217
+
Sbjct: 446 LRQ 448
>gi|322515618|ref|ZP_08068597.1| 50S ribosomal protein L18 [Actinobacillus ureae ATCC 25976]
gi|407693283|ref|YP_006818072.1| 50S ribosomal protein L18 [Actinobacillus suis H91-0380]
gi|322118328|gb|EFX90603.1| 50S ribosomal protein L18 [Actinobacillus ureae ATCC 25976]
gi|407389340|gb|AFU19833.1| 50S ribosomal protein L18 [Actinobacillus suis H91-0380]
Length = 117
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
S+V+ A ++ K +K + T N A A VG ++A+RALA I V + R G K G++
Sbjct: 45 SEVLAAASTVEKVIKEQVKYTGNKDAAAVVGKLVAERALAKGIQAVAFD-RSGFKYHGRV 103
Query: 326 QIVLQAIIDNGV 337
Q++ A + G+
Sbjct: 104 QVLADAAREAGL 115
>gi|32034701|ref|ZP_00134839.1| COG0256: Ribosomal protein L18 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126209239|ref|YP_001054464.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|165977212|ref|YP_001652805.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|190151130|ref|YP_001969655.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|303250028|ref|ZP_07336230.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|303253202|ref|ZP_07339351.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307246705|ref|ZP_07528775.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307248846|ref|ZP_07530859.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307251074|ref|ZP_07532998.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|307253460|ref|ZP_07535331.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307255690|ref|ZP_07537494.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307257874|ref|ZP_07539630.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307260142|ref|ZP_07541852.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307262270|ref|ZP_07543919.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|307264479|ref|ZP_07546064.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|166218496|sp|A3N373.1|RL18_ACTP2 RecName: Full=50S ribosomal protein L18
gi|226723271|sp|B3GZ27.1|RL18_ACTP7 RecName: Full=50S ribosomal protein L18
gi|226723272|sp|B0BSU7.1|RL18_ACTPJ RecName: Full=50S ribosomal protein L18
gi|126098031|gb|ABN74859.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|165877313|gb|ABY70361.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|189916261|gb|ACE62513.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|302647884|gb|EFL78091.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|302651091|gb|EFL81245.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306852405|gb|EFM84640.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306854773|gb|EFM86963.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306856904|gb|EFM89036.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306859139|gb|EFM91181.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306861367|gb|EFM93357.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306863604|gb|EFM95531.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306865788|gb|EFM97666.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306868033|gb|EFM99860.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306870176|gb|EFN01935.1| 50S ribosomal protein L18 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 117
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
S+V+ A ++ K +K + T N A A VG ++A+RALA I V + R G K G++
Sbjct: 45 SEVLAAASTVEKVIKEQVKYTGNKDAAAVVGKLVAERALAKGIQAVAFD-RSGFKYHGRV 103
Query: 326 QIVLQAIIDNGV 337
Q++ A + G+
Sbjct: 104 QVLADAAREAGL 115
>gi|428203667|ref|YP_007082256.1| 50S ribosomal protein L18 [Pleurocapsa sp. PCC 7327]
gi|427981099|gb|AFY78699.1| ribosomal protein L18, bacterial type [Pleurocapsa sp. PCC 7327]
Length = 120
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ V +V A ++ +K +L + A AAVG ++AQRAL
Sbjct: 29 LAVFRSHKHIYAQIIDDVAQHTLVAASTLEPTLKTELSTGATCEASAAVGKLVAQRALEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G+++ + +A + G++
Sbjct: 89 GIEKVVFD-RGGNLYHGRVKALAEAAREAGLS 119
>gi|217967385|ref|YP_002352891.1| 50S ribosomal protein L18 [Dictyoglomus turgidum DSM 6724]
gi|226723315|sp|B8E1E9.1|RL18_DICTD RecName: Full=50S ribosomal protein L18
gi|217336484|gb|ACK42277.1| ribosomal protein L18 [Dictyoglomus turgidum DSM 6724]
Length = 122
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L +Y S + A I+ +V A S+ K+++ L ST+N A VG ++A+RAL
Sbjct: 31 LAVYKSLRYIYAQIIDDTKGHTLVAASSLEKELRSQLKSTKNIEAAKLVGEVIAKRALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQ 326
I VV+ R G GK++
Sbjct: 91 GIKRVVF-DRGGFLYHGKVK 109
>gi|170077670|ref|YP_001734308.1| 50S ribosomal protein L18 [Synechococcus sp. PCC 7002]
gi|226723387|sp|B1XJJ2.1|RL18_SYNP2 RecName: Full=50S ribosomal protein L18
gi|169885339|gb|ACA99052.1| ribosomal protein L18 [Synechococcus sp. PCC 7002]
Length = 120
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A ++ +V A ++ KD+K +L S N +A AVG ++A+RAL
Sbjct: 29 LAVFRSHKHIYAQVIDDEKQHTLVAASTLDKDLKGELASGGNISASTAVGNLIAKRALEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G+++ + A + G++
Sbjct: 89 GITKVVF-DRGGNLYHGRVKALADAAREAGLD 119
>gi|83594004|ref|YP_427756.1| 50S ribosomal protein L18 [Rhodospirillum rubrum ATCC 11170]
gi|386350756|ref|YP_006049004.1| 50S ribosomal protein L18 [Rhodospirillum rubrum F11]
gi|115504944|sp|Q2RQX6.1|RL18_RHORT RecName: Full=50S ribosomal protein L18
gi|83576918|gb|ABC23469.1| LSU ribosomal protein L18P [Rhodospirillum rubrum ATCC 11170]
gi|346719192|gb|AEO49207.1| 50S ribosomal protein L18P [Rhodospirillum rubrum F11]
Length = 120
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ + +V A ++ K+++ +L + A A VG +LA+RA A
Sbjct: 29 LSVFRSNKHMYAQIIDDAEGRTLVSASTVDKELRGNLTKGGDKAAAAEVGKLLAERAKAA 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+VV+ R G K G++Q + A + G++
Sbjct: 89 GYTEVVF-DRGGYKYHGRVQALADAAREAGLS 119
>gi|381165717|ref|ZP_09874944.1| 50S ribosomal subunit protein L18 [Phaeospirillum molischianum DSM
120]
gi|380685207|emb|CCG39756.1| 50S ribosomal subunit protein L18 [Phaeospirillum molischianum DSM
120]
Length = 120
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 223 DNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFD 282
D E+R R L A H L ++ S ++ A ++ + A S+ K +K
Sbjct: 6 DLFERRKRRAR-QSLKAKSHGRLRLSVFRSGQNIYAQVIDDQQGVTLAAASSLDKTLKDS 64
Query: 283 LDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
L + + A AAVG ++A+RA+A I +VV+ R G G+++ + A + G++
Sbjct: 65 LKTGADKQAAAAVGKLIAERAVAAGITEVVF-DRGGYIYHGRVKALADAAREGGLS 119
>gi|358065635|ref|ZP_09152171.1| 50S ribosomal protein L18 [Clostridium hathewayi WAL-18680]
gi|356696121|gb|EHI57744.1| 50S ribosomal protein L18 [Clostridium hathewayi WAL-18680]
Length = 122
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ +V A ++ K K +L+ T + A A VG ++A+RAL
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGNTLVAASTMEKAAKAELEKTNDVAAAAYVGTLIAKRALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G +GK+Q + A + G+
Sbjct: 91 GIDTVVF-DRGGFIYQGKVQALADAAREAGL 120
>gi|117924171|ref|YP_864788.1| 50S ribosomal protein L18 [Magnetococcus marinus MC-1]
gi|117607927|gb|ABK43382.1| LSU ribosomal protein L18P [Magnetococcus marinus MC-1]
Length = 121
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L I+ S + A I+ + +V A ++ KD++ D+ + NA A A +G +A++A
Sbjct: 30 LSIFRSARHIYAQIIDDKQGRTLVSASTVEKDLREDMKNGGNADAAAFIGKRIAEKAKEQ 89
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+I +VV+ R G G+ + + +A + G+N
Sbjct: 90 NITEVVF-DRGGFLYHGRTKALAEAAREAGLN 120
>gi|33152938|ref|NP_874291.1| 50S ribosomal protein L18 [Haemophilus ducreyi 35000HP]
gi|73621601|sp|Q7VKE9.1|RL18_HAEDU RecName: Full=50S ribosomal protein L18
gi|33149163|gb|AAP96680.1| 50S ribosomal protein L18 [Haemophilus ducreyi 35000HP]
Length = 117
Score = 40.0 bits (92), Expect = 1.6, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
S+V+ A ++ K +K + T N A A VG ++A+RALA I V + R G K G++
Sbjct: 45 SEVLAAASTVEKVIKEQVQYTGNKDAAAIVGKLVAERALAKGIQVVAFD-RSGFKYHGRV 103
Query: 326 QIVLQAIIDNGV 337
Q++ A + G+
Sbjct: 104 QVLADAAREAGL 115
>gi|332142190|ref|YP_004427928.1| 50S ribosomal protein L18 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552212|gb|AEA98930.1| 50S ribosomal protein L18 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 121
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 256 VRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTP 315
+ A ++ S+V+ A ++ KD+ DL ST NA A VG +A+RAL I V +
Sbjct: 39 IYAQLIAPCGSEVLAAASTVEKDLAKDLKSTGNAEAATVVGKAIAERALEKGIKTVAF-D 97
Query: 316 RKGEKLEGKLQIVLQAIIDNGVN 338
R G + G+++ + A + G+
Sbjct: 98 RSGFQYHGRVKALADAAREAGLQ 120
>gi|199598848|ref|ZP_03212259.1| Ribosomal protein L18 [Lactobacillus rhamnosus HN001]
gi|258509466|ref|YP_003172217.1| 50S ribosomal protein L18 [Lactobacillus rhamnosus GG]
gi|258540664|ref|YP_003175163.1| 50S ribosomal protein L18 [Lactobacillus rhamnosus Lc 705]
gi|366087922|ref|ZP_09454407.1| 50S ribosomal protein L18 [Lactobacillus zeae KCTC 3804]
gi|385829100|ref|YP_005866872.1| 50S ribosomal protein L18 [Lactobacillus rhamnosus GG]
gi|385836302|ref|YP_005874077.1| 50S ribosomal protein L18 [Lactobacillus rhamnosus ATCC 8530]
gi|417043017|ref|ZP_11948520.1| 50S ribosomal protein L18 [Lactobacillus rhamnosus MTCC 5462]
gi|418072326|ref|ZP_12709598.1| 50S ribosomal protein L18 [Lactobacillus rhamnosus R0011]
gi|421770023|ref|ZP_16206726.1| LSU ribosomal protein L18p (L5e) [Lactobacillus rhamnosus LRHMDP2]
gi|421773278|ref|ZP_16209925.1| LSU ribosomal protein L18p (L5e) [Lactobacillus rhamnosus LRHMDP3]
gi|199590260|gb|EDY98355.1| Ribosomal protein L18 [Lactobacillus rhamnosus HN001]
gi|257149393|emb|CAR88366.1| LSU/50S ribosomal protein L18P [Lactobacillus rhamnosus GG]
gi|257152340|emb|CAR91312.1| LSU/50S ribosomal protein L18P [Lactobacillus rhamnosus Lc 705]
gi|259650745|dbj|BAI42907.1| 50S ribosomal protein L18 [Lactobacillus rhamnosus GG]
gi|328478167|gb|EGF48012.1| 50S ribosomal protein L18 [Lactobacillus rhamnosus MTCC 5462]
gi|355395794|gb|AER65224.1| ribosomal protein L18 [Lactobacillus rhamnosus ATCC 8530]
gi|357537577|gb|EHJ21601.1| 50S ribosomal protein L18 [Lactobacillus rhamnosus R0011]
gi|402795810|dbj|BAM38116.1| 50S ribosomal protein L18 [Lactobacillus casei subsp. casei ATCC
393]
gi|402795894|dbj|BAM38158.1| 50S ribosomal protein L18 [Lactobacillus rhamnosus]
gi|402795922|dbj|BAM38172.1| 50S ribosomal protein L18 [Lactobacillus zeae]
gi|411182184|gb|EKS49337.1| LSU ribosomal protein L18p (L5e) [Lactobacillus rhamnosus LRHMDP3]
gi|411183070|gb|EKS50211.1| LSU ribosomal protein L18p (L5e) [Lactobacillus rhamnosus LRHMDP2]
Length = 119
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L+++ S ++ A ++ V + A ++ KD+K D A A VG ++A+RA+AD
Sbjct: 31 LNVFRSNKNIYAQLIDDVAGVTLASASTLDKDIK---DPENKTDAAAQVGALIAKRAVAD 87
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
H VV R G G++ + +A +NG+
Sbjct: 88 G-HKVVVFDRGGYLYHGRVAALAEAARENGL 117
>gi|406598285|ref|YP_006749415.1| 50S ribosomal protein L18 [Alteromonas macleodii ATCC 27126]
gi|407685275|ref|YP_006800449.1| 50S ribosomal protein L18 [Alteromonas macleodii str. 'English
Channel 673']
gi|407689212|ref|YP_006804385.1| 50S ribosomal protein L18 [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|410863186|ref|YP_006978420.1| 50S ribosomal protein L18 [Alteromonas macleodii AltDE1]
gi|406375606|gb|AFS38861.1| 50S ribosomal protein L18 [Alteromonas macleodii ATCC 27126]
gi|407246886|gb|AFT76072.1| 50S ribosomal protein L18 [Alteromonas macleodii str. 'English
Channel 673']
gi|407292592|gb|AFT96904.1| 50S ribosomal protein L18 [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|410820448|gb|AFV87065.1| 50S ribosomal protein L18 [Alteromonas macleodii AltDE1]
Length = 117
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 256 VRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTP 315
+ A ++ S+V+ A ++ KD+ DL ST NA A VG +A+RAL I V +
Sbjct: 35 IYAQLIAPCGSEVLAAASTVEKDLAKDLKSTGNAEAATVVGKAIAERALEKGIKTVAF-D 93
Query: 316 RKGEKLEGKLQIVLQAIIDNGVN 338
R G + G+++ + A + G+
Sbjct: 94 RSGFQYHGRVKALADAAREAGLQ 116
>gi|350553093|ref|ZP_08922279.1| ribosomal protein L18 [Thiorhodospira sibirica ATCC 700588]
gi|349791944|gb|EGZ45814.1| ribosomal protein L18 [Thiorhodospira sibirica ATCC 700588]
Length = 117
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 245 FCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRAL 304
+ L ++ + + A ++ S+V+ A ++ +K DL T N A +VG ++A+RAL
Sbjct: 24 YRLSVHRTPRHIYAQVLGPSGSEVLACASTVETVVKQDLKGTGNVAAAVSVGRLIAERAL 83
Query: 305 ADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
A I V + R G K G+++ + A + G+
Sbjct: 84 AKGIKQVAF-DRSGFKYHGRVKALADAAREGGL 115
>gi|325577143|ref|ZP_08147627.1| 50S ribosomal protein L18 [Haemophilus parainfluenzae ATCC 33392]
gi|345429285|ref|YP_004822403.1| 50S ribosomal protein L18 [Haemophilus parainfluenzae T3T1]
gi|419802848|ref|ZP_14328028.1| ribosomal protein L18 [Haemophilus parainfluenzae HK262]
gi|419845632|ref|ZP_14368899.1| ribosomal protein L18 [Haemophilus parainfluenzae HK2019]
gi|301155346|emb|CBW14812.1| 50S ribosomal subunit protein L18 [Haemophilus parainfluenzae T3T1]
gi|325160725|gb|EGC72846.1| 50S ribosomal protein L18 [Haemophilus parainfluenzae ATCC 33392]
gi|385189088|gb|EIF36557.1| ribosomal protein L18 [Haemophilus parainfluenzae HK262]
gi|386415500|gb|EIJ30032.1| ribosomal protein L18 [Haemophilus parainfluenzae HK2019]
Length = 117
Score = 40.0 bits (92), Expect = 1.7, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L I+ + + A ++ S+V+ A ++ K ++ + T N A A VG ++A+RALA
Sbjct: 26 LVIHRTPRHIYAQVIAPNGSEVLAAASTVEKAIREQVKYTGNKDAAAVVGKLVAERALAK 85
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ DV + R G K G++Q + A + G+
Sbjct: 86 GVKDVAFD-RSGFKYHGRVQTLADAAREAGL 115
>gi|373859646|ref|ZP_09602372.1| ribosomal protein L18 [Bacillus sp. 1NLA3E]
gi|372450641|gb|EHP24126.1| ribosomal protein L18 [Bacillus sp. 1NLA3E]
Length = 120
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L+++ S + A ++ V + A ++ KD F L+ST N A +G ++A+RA+
Sbjct: 31 LNVFRSNKHIYAQLIDDVNGVTLASASTLDKD--FGLESTGNLEAAQKIGELVAKRAVEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G G++Q + A +NG+
Sbjct: 89 GISSVVF-DRGGYLYHGRVQALADAARENGL 118
>gi|386388942|ref|ZP_10073784.1| ribosomal protein L18 [Haemophilus paraphrohaemolyticus HK411]
gi|387772239|ref|ZP_10128196.1| ribosomal protein L18 [Haemophilus parahaemolyticus HK385]
gi|385696676|gb|EIG27147.1| ribosomal protein L18 [Haemophilus paraphrohaemolyticus HK411]
gi|386907683|gb|EIJ72389.1| ribosomal protein L18 [Haemophilus parahaemolyticus HK385]
Length = 117
Score = 40.0 bits (92), Expect = 1.9, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
S+V+ A ++ K++K + T N A A VG ++A+RALA + V + R G K G++
Sbjct: 45 SEVLAAASTVEKEIKEQVKYTGNKDAAAVVGKLVAERALAKGVQAVAFD-RSGFKYHGRV 103
Query: 326 QIVLQAIIDNGV 337
Q + A + G+
Sbjct: 104 QALADAAREAGL 115
>gi|300814649|ref|ZP_07094900.1| ribosomal protein L18 [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511268|gb|EFK38517.1| ribosomal protein L18 [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 120
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S A + A ++ + +V A S+ K + +L+ST+N A AVG +A++AL
Sbjct: 31 LSVFRSDAHIYAQVIDDDSMNTIVSASSLDKSL--NLESTKNIEAAKAVGKDIAKKALEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VV+ R G GK++ + +A + G+
Sbjct: 89 GIEEVVF-DRSGYIYHGKIKALAEAAREEGL 118
>gi|254492311|ref|ZP_05105484.1| ribosomal protein L18 [Methylophaga thiooxidans DMS010]
gi|224462483|gb|EEF78759.1| ribosomal protein L18 [Methylophaga thiooxydans DMS010]
Length = 117
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 243 EPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQR 302
E + L ++ + + A ++ ++KV+ A ++ ++K +L +T N A AVG +A+R
Sbjct: 22 EVYRLTVHRTPRHIYAQVLTHDSTKVIATASTLDAEVKKELKNTGNIDAATAVGKAIAER 81
Query: 303 ALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
A + I +V + R G + G+++ + A +NG+
Sbjct: 82 AAKEGITEVAF-DRSGFRYHGRVKALADAARENGLQ 116
>gi|327475251|gb|AEA77220.1| LSU ribosomal protein L18p [Bacillus sp. 15.4]
Length = 120
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
RVR+ ++T P L++Y S ++ A ++ V V +A + + D + +LDST
Sbjct: 17 RVRS----KITGTEQRP-RLNVYRSNKNIYAQLIDDVNG--VTLASASTVDKEINLDSTG 69
Query: 288 NATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
N A VG ++A+RA + VV+ R G G+++ + A +NG+
Sbjct: 70 NVDAAVQVGELIAKRATEKGLKSVVF-DRGGYLYHGRVKALADAARENGL 118
>gi|240145862|ref|ZP_04744463.1| ribosomal protein L18 [Roseburia intestinalis L1-82]
gi|257202010|gb|EEV00295.1| ribosomal protein L18 [Roseburia intestinalis L1-82]
gi|291535443|emb|CBL08555.1| LSU ribosomal protein L18P [Roseburia intestinalis M50/1]
Length = 122
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ +V A ++ KD+K +L+ T N A A +G ++A++AL
Sbjct: 31 LAVFRSNNHMYAQIIDDTVGNTLVSASTLDKDVKAELEKTNNVEAAAKLGTVIAKKALDK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G GK++ + +A + G++
Sbjct: 91 GISTVVF-DRGGFIYAGKVKALAEAAREAGLD 121
>gi|427726128|ref|YP_007073405.1| 50S ribosomal protein L18 [Leptolyngbya sp. PCC 7376]
gi|427357848|gb|AFY40571.1| LSU ribosomal protein L18P [Leptolyngbya sp. PCC 7376]
Length = 120
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L I+ S + A ++ + A ++ KD++ +L S N A +AVG ++A+RAL
Sbjct: 29 LAIFRSHKHIYAQVIDDDKQHTLAAASTLDKDLRAELASGGNTAASSAVGSLIAKRALEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G+++ + +A + G++
Sbjct: 89 GITKVVF-DRGGNLYHGRVKALAEAAREAGLD 119
>gi|229552724|ref|ZP_04441449.1| ribosomal protein L18 [Lactobacillus rhamnosus LMS2-1]
gi|423078528|ref|ZP_17067208.1| ribosomal protein L18 [Lactobacillus rhamnosus ATCC 21052]
gi|229313930|gb|EEN79903.1| ribosomal protein L18 [Lactobacillus rhamnosus LMS2-1]
gi|357550559|gb|EHJ32372.1| ribosomal protein L18 [Lactobacillus rhamnosus ATCC 21052]
Length = 122
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L+++ S ++ A ++ V + A ++ KD+K D A A VG ++A+RA+AD
Sbjct: 34 LNVFRSNKNIYAQLIDDVAGVTLASASTLDKDIK---DPENKTDAAAQVGALIAKRAVAD 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
H VV R G G++ + +A +NG+
Sbjct: 91 G-HKVVVFDRGGYLYHGRVAALAEAARENGL 120
>gi|118595319|ref|ZP_01552666.1| 50S ribosomal protein L18 [Methylophilales bacterium HTCC2181]
gi|118441097|gb|EAV47724.1| 50S ribosomal protein L18 [Methylophilales bacterium HTCC2181]
Length = 117
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L +Y S +++ A I+ +KV+ A + ++K L +T N A A+G +A++A+
Sbjct: 26 LTVYRSNSNIYAQIIDGNNNKVIATASTTEAEVKKTLKNTSNKDAAIAIGKRIAEKAVKA 85
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ ++ + R G K G+++ + + +NG+
Sbjct: 86 GVKEIAF-DRSGYKYHGRIKALADSARENGL 115
>gi|393764526|ref|ZP_10353132.1| 50S ribosomal protein L18 [Methylobacterium sp. GXF4]
gi|392730034|gb|EIZ87293.1| 50S ribosomal protein L18 [Methylobacterium sp. GXF4]
Length = 120
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + ++ V K + A SI K +K DL + + A AVG ++A+RA A
Sbjct: 29 LSVFRSSKQIYVQVIDDVAGKTLAAASSIDKALKGDLKTGADVAAATAVGKLVAERAKAA 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ V++ R G G+++ V +A + G+
Sbjct: 89 GVTKVIF-DRSGYIYHGRVKAVAEAAREGGL 118
>gi|299143178|ref|ZP_07036258.1| ribosomal protein L18 [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517663|gb|EFI41402.1| ribosomal protein L18 [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 120
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Query: 215 FNKIVMSDDNVE--KRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVA 272
FNKI + + ++ KR+R T P L ++ S A + A ++ V +V A
Sbjct: 2 FNKIDRNANRIKRHKRIRNKISGTTTCPR-----LSVFRSGAHIYAQLIDDVKGHTMVSA 56
Query: 273 HSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAI 332
++ K + L++T+N A +G +A+RAL I + V+ R G G+++ + +A
Sbjct: 57 TTLDKSL--GLENTKNMEAAKKIGETIAKRALDAGIEEAVF-DRSGYLYHGRIKALAEAA 113
Query: 333 IDNGV 337
+ G+
Sbjct: 114 REAGL 118
>gi|387128150|ref|YP_006296755.1| 50S ribosomal protein L18 [Methylophaga sp. JAM1]
gi|386275212|gb|AFI85110.1| LSU ribosomal protein L18p (L5e) [Methylophaga sp. JAM1]
Length = 117
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 243 EPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQR 302
E + L I+ + + A ++ +SKVV A ++ ++K L+ T N A VG +AQR
Sbjct: 22 EVYRLTIHRTPRHIYAQVLTHDSSKVVASASTLDPEVKKALEGTGNVAAAELVGKTVAQR 81
Query: 303 ALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
A + I V + R G G+++ + A +NG+
Sbjct: 82 AAKEGITQVAF-DRSGFSYHGRVKALADAARENGLQ 116
>gi|389878473|ref|YP_006372038.1| 50S ribosomal protein L18 [Tistrella mobilis KA081020-065]
gi|388529257|gb|AFK54454.1| ribosomal protein L18 [Tistrella mobilis KA081020-065]
Length = 119
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 226 EKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDS 285
++RVRT QL H L +Y S ++ A I+ V + A ++ ++K +L +
Sbjct: 11 KRRVRT----QLRKKSHGRPRLSVYRSNLNIYAQIIDDVQGVTLASASTLDSELKGELKN 66
Query: 286 TRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
A AVG ++A RA A + +VV+ R G G+++ + A + G++
Sbjct: 67 GAGIEAAKAVGKLIASRAAASGVTEVVF-DRGGYIYHGRVKALADAAREGGLS 118
>gi|291562755|emb|CBL41571.1| LSU ribosomal protein L18P [butyrate-producing bacterium SS3/4]
Length = 122
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ +V A ++ K++K +L++T A A +G ++A+RA+
Sbjct: 31 LAVFRSNNHMYAQIIDDSVGHTLVSASTLEKEIKAELENTDTVDAAAYIGTVVAKRAIEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VV+ R G +GK+Q + A + G+
Sbjct: 91 GIKEVVF-DRGGFIYQGKIQALADAAREAGL 120
>gi|251793844|ref|YP_003008576.1| 50S ribosomal protein L18 [Aggregatibacter aphrophilus NJ8700]
gi|416893393|ref|ZP_11924581.1| 50S ribosomal protein L18 [Aggregatibacter aphrophilus ATCC 33389]
gi|422337199|ref|ZP_16418171.1| 50S ribosomal protein L18 [Aggregatibacter aphrophilus F0387]
gi|247535243|gb|ACS98489.1| ribosomal protein L18 [Aggregatibacter aphrophilus NJ8700]
gi|347813947|gb|EGY30599.1| 50S ribosomal protein L18 [Aggregatibacter aphrophilus ATCC 33389]
gi|353345751|gb|EHB90042.1| 50S ribosomal protein L18 [Aggregatibacter aphrophilus F0387]
Length = 117
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
S+V+ A ++ K + + T N A A VG I+A+RALA I DV + R G K G++
Sbjct: 45 SEVLAAASTVEKAISEQVKYTGNKDAAAVVGKIVAERALAKGIKDVAF-DRSGFKYHGRI 103
Query: 326 QIVLQAIIDNGVN 338
Q + A + G+
Sbjct: 104 QSLADAAREAGLQ 116
>gi|291547995|emb|CBL21103.1| LSU ribosomal protein L18P [Ruminococcus sp. SR1/5]
Length = 122
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ K +V A ++ KD+K +L++T + A A VG ++ ++A+
Sbjct: 31 LAVFRSNKHIYAQIIDDTVGKTLVSASTLQKDVKAELENTDDVQAAAKVGTVIGKKAVEA 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G GK++ + A + G+
Sbjct: 91 GIESVVF-DRGGYIYHGKVKALADAAREAGL 120
>gi|344206197|ref|YP_004791338.1| 50S ribosomal protein L18 [Stenotrophomonas maltophilia JV3]
gi|343777559|gb|AEM50112.1| ribosomal protein L18 [Stenotrophomonas maltophilia JV3]
Length = 117
Score = 39.3 bits (90), Expect = 2.8, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
SKV+ A++ D+K L + +NA A A VG I+A+RA A I V + R G + G++
Sbjct: 45 SKVLAAANTTQTDVKEGLKNGKNADAAAKVGRIVAERAKAAGIEKVAFD-RSGYRYHGRI 103
Query: 326 QIVLQAIIDNGV 337
+ + +A + G+
Sbjct: 104 KALAEAAREAGL 115
>gi|415886263|ref|ZP_11548086.1| 50S ribosomal protein L18 [Bacillus methanolicus MGA3]
gi|387588916|gb|EIJ81237.1| 50S ribosomal protein L18 [Bacillus methanolicus MGA3]
Length = 120
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L+++ S + A ++ V + A ++ KD+ +L+ST N A VG ++A+RA+
Sbjct: 31 LNVFRSNKHIYAQLIDDVNGVTLASASTLDKDL--NLESTGNVEAAQKVGELVAKRAIEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G G+++ + +A +NG+
Sbjct: 89 GIKSVVF-DRGGYLYHGRVKALAEAARENGL 118
>gi|373455318|ref|ZP_09547154.1| 50S ribosomal protein L18 [Dialister succinatiphilus YIT 11850]
gi|371934958|gb|EHO62731.1| 50S ribosomal protein L18 [Dialister succinatiphilus YIT 11850]
Length = 121
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L+++ S A++ A ++ +V A+++ K++K NA A AVG ++A+RAL
Sbjct: 30 LNVFRSLANIYAQVIDDEAGVTLVSANTLDKEIKAQFPYGGNAEAAKAVGALVAKRALEK 89
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G G++Q + + + G+
Sbjct: 90 GIETVVF-DRGGYIYHGRVQALAEGAREAGL 119
>gi|152978157|ref|YP_001343786.1| 50S ribosomal protein L18 [Actinobacillus succinogenes 130Z]
gi|171704196|sp|A6VLK4.1|RL18_ACTSZ RecName: Full=50S ribosomal protein L18
gi|150839880|gb|ABR73851.1| ribosomal protein L18 [Actinobacillus succinogenes 130Z]
Length = 117
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
S+V+ A ++ K++ + T N A A VG ++A+RALA + DV + R G K G++
Sbjct: 45 SEVLAAASTVEKEISAQVKYTGNKDAAAVVGKLVAERALAKGVKDVAF-DRSGFKYHGRV 103
Query: 326 QIVLQAIIDNGVN 338
Q + A + G+
Sbjct: 104 QSLADAAREAGLQ 116
>gi|389577516|ref|ZP_10167544.1| ribosomal protein L18, bacterial type [Eubacterium cellulosolvens
6]
gi|389313001|gb|EIM57934.1| ribosomal protein L18, bacterial type [Eubacterium cellulosolvens
6]
Length = 122
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ T+K +V A ++ KD+K +L+ T + A +G ++ ++A+
Sbjct: 31 LSVFRSNNHMYAQIIDDSTAKTLVAASTLEKDVKANLEKTNDVEAAKYLGSVIGKKAVEA 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G GK+Q + A + G+
Sbjct: 91 GIKAVVF-DRGGYIYHGKVQALADAAREAGL 120
>gi|433447328|ref|ZP_20410925.1| 50S ribosomal protein L18 [Anoxybacillus flavithermus TNO-09.006]
gi|431999992|gb|ELK20899.1| 50S ribosomal protein L18 [Anoxybacillus flavithermus TNO-09.006]
Length = 120
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L+++ S + A I+ V + +V A ++ K+ FDL+ST N A VG ++A+RAL
Sbjct: 31 LNVFRSNKHIYAQIIDDVKAVTLVSASTLDKE--FDLESTGNVEAAQKVGELIAKRALEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G+++ + A + G+
Sbjct: 89 GITAVVF-DRGGYLYHGRVKALADAAREAGLQ 119
>gi|260589262|ref|ZP_05855175.1| ribosomal protein L18 [Blautia hansenii DSM 20583]
gi|331082669|ref|ZP_08331792.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540343|gb|EEX20912.1| ribosomal protein L18 [Blautia hansenii DSM 20583]
gi|330400288|gb|EGG79930.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 6_1_63FAA]
Length = 122
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N L+ P L ++ S + A I+ + +V A + K++K +L+ T N A A
Sbjct: 20 NHLSGTSATP-RLAVFRSNNHMYAQIIDDTVGRTLVSASTTQKEVKAELEKTNNVDAAAY 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+G ++A+RA+ I +VV+ R G GK++ + A + G+
Sbjct: 79 LGTVIAKRAIEAGIKEVVF-DRGGFIYHGKVKALADAAREAGL 120
>gi|116495931|ref|YP_807665.1| 50S ribosomal protein L18 [Lactobacillus casei ATCC 334]
gi|191639413|ref|YP_001988579.1| 50S ribosomal protein L18 [Lactobacillus casei BL23]
gi|239630335|ref|ZP_04673366.1| 50S ribosomal protein L18 [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301067487|ref|YP_003789510.1| 50S ribosomal protein L18 [Lactobacillus casei str. Zhang]
gi|385821174|ref|YP_005857561.1| 50S ribosomal protein L18, putative, expressed [Lactobacillus casei
LC2W]
gi|385824367|ref|YP_005860709.1| 50S ribosomal protein L18, putative [Lactobacillus casei BD-II]
gi|417981675|ref|ZP_12622340.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei 12A]
gi|417984492|ref|ZP_12625114.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei 21/1]
gi|417987749|ref|ZP_12628303.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei 32G]
gi|417990786|ref|ZP_12631251.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei A2-362]
gi|417994109|ref|ZP_12634444.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei CRF28]
gi|417995408|ref|ZP_12635701.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei M36]
gi|418000130|ref|ZP_12640328.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei T71499]
gi|418003269|ref|ZP_12643360.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei UCD174]
gi|418006304|ref|ZP_12646263.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei UW1]
gi|418009001|ref|ZP_12648845.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei UW4]
gi|418011871|ref|ZP_12651620.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei Lc-10]
gi|418014970|ref|ZP_12654554.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei Lpc-37]
gi|122262669|sp|Q034Z9.1|RL18_LACC3 RecName: Full=50S ribosomal protein L18
gi|226723341|sp|B3WAK2.1|RL18_LACCB RecName: Full=50S ribosomal protein L18
gi|116106081|gb|ABJ71223.1| LSU ribosomal protein L18P [Lactobacillus casei ATCC 334]
gi|190713715|emb|CAQ67721.1| 50S ribosomal protein L18 [Lactobacillus casei BL23]
gi|239527947|gb|EEQ66948.1| 50S ribosomal protein L18 [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300439894|gb|ADK19660.1| Ribosomal protein L18 [Lactobacillus casei str. Zhang]
gi|327383501|gb|AEA54977.1| 50S ribosomal protein L18, putative, expressed [Lactobacillus casei
LC2W]
gi|327386694|gb|AEA58168.1| 50S ribosomal protein L18, putative [Lactobacillus casei BD-II]
gi|402795838|dbj|BAM38130.1| 50S ribosomal protein L18 [Lactobacillus paracasei subsp.
paracasei]
gi|402795866|dbj|BAM38144.1| 50S ribosomal protein L18 [Lactobacillus paracasei subsp. tolerans]
gi|410521814|gb|EKP96772.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei 12A]
gi|410522571|gb|EKP97515.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei 32G]
gi|410525286|gb|EKQ00189.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei 21/1]
gi|410530765|gb|EKQ05533.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei CRF28]
gi|410533644|gb|EKQ08312.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei A2-362]
gi|410537376|gb|EKQ11951.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei T71499]
gi|410537545|gb|EKQ12118.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei M36]
gi|410542646|gb|EKQ17081.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei UCD174]
gi|410544228|gb|EKQ18564.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei UW1]
gi|410544914|gb|EKQ19224.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei UW4]
gi|410551487|gb|EKQ25545.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei Lc-10]
gi|410552492|gb|EKQ26516.1| LSU ribosomal protein L18p (L5e) [Lactobacillus casei Lpc-37]
Length = 119
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA-VGGILAQRALA 305
L+I+ S ++ A ++ V + A ++ KD+K N TA +A VG ++A+RA+A
Sbjct: 31 LNIFRSNKNIYAQLIDDVAGVTLASASTLDKDIK----DPENKTAASAQVGALIAKRAVA 86
Query: 306 DDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
D H VV R G G++ + +A +NG+
Sbjct: 87 DG-HKVVVFDRGGYLYHGRVAALAEAARENGL 117
>gi|297537547|ref|YP_003673316.1| 50S ribosomal protein L18 [Methylotenera versatilis 301]
gi|297256894|gb|ADI28739.1| ribosomal protein L18 [Methylotenera versatilis 301]
Length = 117
Score = 39.3 bits (90), Expect = 3.2, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 223 DNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFD 282
+NV R+R + + L ++ + A I+ KV+V A ++ D++ +
Sbjct: 2 NNVNNRLRRARKTRAKIAELKVTRLSVHRTNLHTYAQIIDATGGKVIVSASTVEADVRKN 61
Query: 283 LDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+ + N A AA+G ++A++A+ + V + R G K G+++ + A +NG++
Sbjct: 62 IKNGGNVEAAAAIGKLIAEKAVKAGVTTVAFD-RSGYKYHGRIKALADAARENGLS 116
>gi|153812880|ref|ZP_01965548.1| hypothetical protein RUMOBE_03287 [Ruminococcus obeum ATCC 29174]
gi|149831092|gb|EDM86181.1| ribosomal protein L18 [Ruminococcus obeum ATCC 29174]
Length = 122
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 226 EKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDS 285
+R+R T P L +Y S + A I+ K +V A ++ KD+K +L++
Sbjct: 15 HRRIRHHLNGTATTPR-----LAVYRSNKHMYAQIIDDTVGKTLVSASTLQKDVKAELEN 69
Query: 286 TRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
T + A A +G ++ ++A+ I VV+ R G GK++ + A + G+
Sbjct: 70 TDDVKAAAYLGTVIGKKAVEAGIESVVF-DRGGYIYHGKVKALADAAREAGL 120
>gi|374308535|ref|YP_005054966.1| 50S ribosomal protein L18 [Filifactor alocis ATCC 35896]
gi|291166863|gb|EFE28909.1| 50S ribosomal protein L18 [Filifactor alocis ATCC 35896]
Length = 122
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
++Y S ++ ++ V +V A ++ K +K L+ST N A VG I A+RA+
Sbjct: 31 FNVYRSTNNIYVQVIDDVNRVTLVSASTLDKAIKEQLESTGNKEAARLVGKIAAERAIEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VV+ R G G++Q V + + G+
Sbjct: 91 GIKEVVF-DRGGYIYHGRVQQVAEGAREAGL 120
>gi|15965125|ref|NP_385478.1| 50S ribosomal protein L18 [Sinorhizobium meliloti 1021]
gi|334315911|ref|YP_004548530.1| 50S ribosomal protein L18 [Sinorhizobium meliloti AK83]
gi|384529083|ref|YP_005713171.1| 50S ribosomal protein L18 [Sinorhizobium meliloti BL225C]
gi|384536637|ref|YP_005720722.1| 50S ribosomal protein L18 [Sinorhizobium meliloti SM11]
gi|407720312|ref|YP_006839974.1| 50S ribosomal protein L18 [Sinorhizobium meliloti Rm41]
gi|418404887|ref|ZP_12978325.1| 50S ribosomal protein L18 [Sinorhizobium meliloti CCNWSX0020]
gi|433613143|ref|YP_007189941.1| ribosomal protein L18, bacterial type [Sinorhizobium meliloti GR4]
gi|73621681|sp|Q92QF4.1|RL18_RHIME RecName: Full=50S ribosomal protein L18
gi|15074305|emb|CAC45951.1| Probable 50S ribosomal protein L18 [Sinorhizobium meliloti 1021]
gi|333811259|gb|AEG03928.1| ribosomal protein L18 [Sinorhizobium meliloti BL225C]
gi|334094905|gb|AEG52916.1| ribosomal protein L18 [Sinorhizobium meliloti AK83]
gi|336033529|gb|AEH79461.1| 50S ribosomal protein L18 [Sinorhizobium meliloti SM11]
gi|359501151|gb|EHK73775.1| 50S ribosomal protein L18 [Sinorhizobium meliloti CCNWSX0020]
gi|407318544|emb|CCM67148.1| 50S ribosomal protein L18 [Sinorhizobium meliloti Rm41]
gi|429551333|gb|AGA06342.1| ribosomal protein L18, bacterial type [Sinorhizobium meliloti GR4]
Length = 120
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S ++ A I+ V K + A ++ D++ L + + A AVG +LA+RA
Sbjct: 29 LSVHRSSKNIYAQIIDDVAGKTIASASTLDTDLRSSLKTGADTEAATAVGKLLAERASKA 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I DVV+ R G+++ + +A + G+N
Sbjct: 89 GIKDVVF-DRGAFIYHGRIKALAEAAREGGLN 119
>gi|291537913|emb|CBL11024.1| LSU ribosomal protein L18P [Roseburia intestinalis XB6B4]
Length = 105
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ +V A ++ KD+K +L+ T N A A +G ++A++AL
Sbjct: 14 LAVFRSNNHMYAQIIDDTVGNTLVSASTLDKDVKAELEKTNNVEAAAKLGTVIAKKALDK 73
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G GK++ + +A + G++
Sbjct: 74 GISTVVF-DRGGFIYAGKVKALAEAAREAGLD 104
>gi|295093649|emb|CBK82740.1| ribosomal protein L18, bacterial type [Coprococcus sp. ART55/1]
Length = 83
Score = 38.9 bits (89), Expect = 3.7, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 258 ACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRK 317
A I+ K +V A + K +K +L+ T + A A VG ++A+RAL I V+Y R
Sbjct: 3 AQIIDDSVGKTLVAASTTEKAIKDELEKTNDVDAAAYVGKVIAERALEKGIKTVIYD-RG 61
Query: 318 GEKLEGKLQIVLQAIIDNGV 337
G GK+Q + A + G+
Sbjct: 62 GFVYHGKVQALADAAREAGL 81
>gi|308513331|ref|NP_953884.2| 50S ribosomal protein L18 [Geobacter sulfurreducens PCA]
gi|409913286|ref|YP_006891751.1| 50S ribosomal protein L18 [Geobacter sulfurreducens KN400]
gi|73621598|sp|Q749A3.1|RL18_GEOSL RecName: Full=50S ribosomal protein L18
gi|41152769|gb|AAR36234.2| ribosomal protein L18 [Geobacter sulfurreducens PCA]
gi|298506872|gb|ADI85595.1| ribosomal protein L18 [Geobacter sulfurreducens KN400]
Length = 122
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L+++ S + A I+ T +V A ++ K+ L+ N A VG ++A+RAL
Sbjct: 31 LNVFKSAQHIYAQIIDDTTGTTLVSASTVQKEASESLNHCGNVEAAKRVGALIAKRALEK 90
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+I VV+ R G G+++ + + +NG+
Sbjct: 91 NIATVVF-DRNGFLYHGRIKALADSARENGL 120
>gi|227533976|ref|ZP_03964025.1| ribosomal protein L18 [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|409998271|ref|YP_006752672.1| 50S ribosomal protein L18 [Lactobacillus casei W56]
gi|227188353|gb|EEI68420.1| ribosomal protein L18 [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|406359283|emb|CCK23553.1| 50S ribosomal protein L18 [Lactobacillus casei W56]
Length = 122
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA-VGGILAQRALA 305
L+I+ S ++ A ++ V + A ++ KD+K N TA +A VG ++A+RA+A
Sbjct: 34 LNIFRSNKNIYAQLIDDVAGVTLASASTLDKDIK----DPENKTAASAQVGALIAKRAVA 89
Query: 306 DDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
D H VV R G G++ + +A +NG+
Sbjct: 90 DG-HKVVVFDRGGYLYHGRVAALAEAARENGL 120
>gi|282882549|ref|ZP_06291170.1| ribosomal protein L18 [Peptoniphilus lacrimalis 315-B]
gi|281297691|gb|EFA90166.1| ribosomal protein L18 [Peptoniphilus lacrimalis 315-B]
Length = 120
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S A + A ++ + +V A S+ K + +L+ST+N A AVG +A++AL
Sbjct: 31 LSVFRSDAHIYAQVIDDDSMNTIVSASSLDKSL--NLESTKNIEAAKAVGKDIAKKALEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I +VV+ R G G+++ + +A + G+
Sbjct: 89 GIEEVVF-DRSGYIYHGRIKALAEAAREEGL 118
>gi|418518906|ref|ZP_13085035.1| 50S ribosomal protein L18 [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
gi|410701932|gb|EKQ60446.1| 50S ribosomal protein L18 [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
Length = 119
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
SKV+ A+++ D+K L + +N+ A A VG ++A+RA A I V + R G + G++
Sbjct: 47 SKVIAAANTLQADVKDGLKNGKNSDAAAKVGKLIAERAKAAGIEKVAF-DRSGYRYHGRI 105
Query: 326 QIVLQAIIDNGV 337
+ + A + G+
Sbjct: 106 KALADAAREGGL 117
>gi|212637970|ref|YP_002314490.1| 50S ribosomal protein L18 [Anoxybacillus flavithermus WK1]
gi|212559450|gb|ACJ32505.1| Ribosomal protein L18 [Anoxybacillus flavithermus WK1]
Length = 126
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L+++ S + A I+ + + +V A ++ K+ FDL+ST N A VG ++A+RAL
Sbjct: 37 LNVFRSNKHIYAQIIDDMKAVTLVSASTLDKE--FDLESTGNVEAAQKVGELIAKRALEK 94
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I VV+ R G G+++ + A + G+
Sbjct: 95 GITSVVF-DRGGYLYHGRVKALADAAREAGLQ 125
>gi|21241753|ref|NP_641335.1| 50S ribosomal protein L18 [Xanthomonas axonopodis pv. citri str.
306]
gi|78046571|ref|YP_362746.1| 50S ribosomal protein L18 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|294627855|ref|ZP_06706434.1| 50S ribosomal protein L18 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294664160|ref|ZP_06729546.1| 50S ribosomal protein L18 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325925371|ref|ZP_08186773.1| LSU ribosomal protein L18P [Xanthomonas perforans 91-118]
gi|346723896|ref|YP_004850565.1| 50S ribosomal protein L18 [Xanthomonas axonopodis pv. citrumelo F1]
gi|381171779|ref|ZP_09880919.1| ribosomal protein L18 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|390992804|ref|ZP_10263021.1| ribosomal protein L18 [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|418522326|ref|ZP_13088363.1| 50S ribosomal protein L18 [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|73621734|sp|Q8PNR1.1|RL18_XANAC RecName: Full=50S ribosomal protein L18
gi|115502819|sp|Q3BWW7.1|RL18_XANC5 RecName: Full=50S ribosomal protein L18
gi|21107124|gb|AAM35871.1| 50S ribosomal protein L18 [Xanthomonas axonopodis pv. citri str.
306]
gi|78035001|emb|CAJ22646.1| 50S ribosomal protein L18 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|292597769|gb|EFF41927.1| 50S ribosomal protein L18 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292606063|gb|EFF49328.1| 50S ribosomal protein L18 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325544249|gb|EGD15630.1| LSU ribosomal protein L18P [Xanthomonas perforans 91-118]
gi|346648643|gb|AEO41267.1| 50S ribosomal protein L18 [Xanthomonas axonopodis pv. citrumelo F1]
gi|372552472|emb|CCF69996.1| ribosomal protein L18 [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|380687739|emb|CCG37406.1| ribosomal protein L18 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|410701441|gb|EKQ59965.1| 50S ribosomal protein L18 [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
Length = 119
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
SKV+ A+++ D+K L + +N+ A A VG ++A+RA A I V + R G + G++
Sbjct: 47 SKVIAAANTLQADVKDGLKNGKNSDAAAKVGKLIAERAKAAGIEKVAF-DRSGYRYHGRI 105
Query: 326 QIVLQAIIDNGV 337
+ + A + G+
Sbjct: 106 KALADAAREGGL 117
>gi|194364550|ref|YP_002027160.1| 50S ribosomal protein L18 [Stenotrophomonas maltophilia R551-3]
gi|194347354|gb|ACF50477.1| ribosomal protein L18 [Stenotrophomonas maltophilia R551-3]
Length = 117
Score = 38.9 bits (89), Expect = 4.2, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
SKV+ A++ D+K L + +NA A A VG I+A+RA A + V + R G + G++
Sbjct: 45 SKVLAAANTTQADIKDGLKNGKNADAAAKVGRIVAERAKAAGVEKVAFD-RSGYRYHGRI 103
Query: 326 QIVLQAIIDNGV 337
+ + +A + G+
Sbjct: 104 KALAEAAREAGL 115
>gi|386717234|ref|YP_006183560.1| 50S ribosomal protein L18 [Stenotrophomonas maltophilia D457]
gi|384076796|emb|CCH11381.1| LSU ribosomal protein L18p (L5e) [Stenotrophomonas maltophilia
D457]
Length = 117
Score = 38.5 bits (88), Expect = 4.4, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
SKV+ A++ D+K L + +NA A A VG I+A+RA A + V + R G + G++
Sbjct: 45 SKVLAAANTTQTDVKEGLKNGKNADAAAKVGRIVAERAKAAGVEKVAFD-RSGYRYHGRI 103
Query: 326 QIVLQAIIDNGV 337
+ + +A + G+
Sbjct: 104 KALAEAAREAGL 115
>gi|357418214|ref|YP_004931234.1| 50S ribosomal protein L18 [Pseudoxanthomonas spadix BD-a59]
gi|355335792|gb|AER57193.1| 50S ribosomal protein L18 [Pseudoxanthomonas spadix BD-a59]
Length = 118
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 18/103 (17%)
Query: 252 SKASVRACIVHRVT-----------------SKVVVVAHSISKDMKFDLDSTRNATACAA 294
+++ +R VHR+T SKVV A+++ D+K L + +N+ A A
Sbjct: 15 TRSHIRVLGVHRLTVLRTGQHLYAQVFTADGSKVVASANTLQADVKEGLKNGKNSDAAAK 74
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+G ++A+RA A + V + R G + G+++ + A + G+
Sbjct: 75 IGKLIAERARAAGVEKVAF-DRSGYRYHGRVKALADAAREGGL 116
>gi|227115256|ref|ZP_03828912.1| 50S ribosomal protein L18 [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|227328933|ref|ZP_03832957.1| 50S ribosomal protein L18 [Pectobacterium carotovorum subsp.
carotovorum WPP14]
gi|253690167|ref|YP_003019357.1| 50S ribosomal protein L18 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|403060233|ref|YP_006648450.1| 50S ribosomal protein L18 [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|259646107|sp|C6DG58.1|RL18_PECCP RecName: Full=50S ribosomal protein L18
gi|251756745|gb|ACT14821.1| ribosomal protein L18 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|402807559|gb|AFR05197.1| 50S ribosomal protein L18 [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 117
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
S+V+V A ++ K + L ST N A +A+G +A+RAL I DV + R G + G++
Sbjct: 45 SEVLVAASTVEKAIAEQLKSTGNKDAASAIGKAIAERALEKGIKDVSFD-RSGFQYHGRV 103
Query: 326 QIVLQAIIDNGVN 338
Q + A + G+
Sbjct: 104 QALADAAREAGLQ 116
>gi|387120538|ref|YP_006286421.1| 50S ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415765300|ref|ZP_11482685.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|416032631|ref|ZP_11572899.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|416048086|ref|ZP_11576208.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|416058061|ref|ZP_11580405.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|416069578|ref|ZP_11583312.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|429735161|ref|ZP_19269136.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans Y4]
gi|347993454|gb|EGY34811.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347999814|gb|EGY40628.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|347999949|gb|EGY40757.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|348000070|gb|EGY40869.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|348653959|gb|EGY69620.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|385875030|gb|AFI86589.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans D7S-1]
gi|429149976|gb|EKX92932.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans Y4]
Length = 117
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
S+V+ A ++ K + + T N A A VG I+A+RALA + DV + R G K G++
Sbjct: 45 SEVLAAASTVEKAISEQVKYTGNKDAAAVVGKIVAERALAKGVKDVAF-DRSGFKYHGRI 103
Query: 326 QIVLQAIIDNGVN 338
Q + A + G+
Sbjct: 104 QSLADAAREAGLQ 116
>gi|416051259|ref|ZP_11577357.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347993277|gb|EGY34651.1| ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 117
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
S+V+ A ++ K + + T N A A VG I+A+RALA + DV + R G K G++
Sbjct: 45 SEVLAAASTVEKAISEQVKYTGNKDAAAVVGKIVAERALAKGVKDVAF-DRSGFKYHGRI 103
Query: 326 QIVLQAIIDNGVN 338
Q + A + G+
Sbjct: 104 QSLADAAREAGLQ 116
>gi|145588258|ref|YP_001154855.1| 50S ribosomal protein L18 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189041565|sp|A4SUX7.1|RL18_POLSQ RecName: Full=50S ribosomal protein L18
gi|145046664|gb|ABP33291.1| LSU ribosomal protein L18P [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 117
Score = 38.5 bits (88), Expect = 4.6, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + S + A + +KVV A ++ KD++ + + NA A A +G ++A+RA+
Sbjct: 26 LTVIRSNTHISAQVYSPCGTKVVAAASTMEKDLRQAIKNGGNAQAAAQIGKLVAERAVKA 85
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ DV + R G + G+++ + +A + G+
Sbjct: 86 GVVDVAFD-RSGHRYHGRIKALAEAAREAGL 115
>gi|319654884|ref|ZP_08008959.1| 50S ribosomal protein L18 [Bacillus sp. 2_A_57_CT2]
gi|317393447|gb|EFV74210.1| 50S ribosomal protein L18 [Bacillus sp. 2_A_57_CT2]
Length = 120
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L++Y S + A ++ V V VA + ++D + +LD+T N A VG ++A+RA+
Sbjct: 31 LNVYRSNKHIYAQLIDDVNG--VTVASASTQDKEVNLDATGNVDAAVKVGELVAKRAVEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ VV+ R G G+++ + A +NG+
Sbjct: 89 GVKAVVF-DRGGYLYHGRVKALADAARENGL 118
>gi|83591260|ref|YP_431269.1| 50S ribosomal protein L18 [Moorella thermoacetica ATCC 39073]
gi|115504914|sp|Q2RFR3.1|RL18_MOOTA RecName: Full=50S ribosomal protein L18
gi|83574174|gb|ABC20726.1| LSU ribosomal protein L18P [Moorella thermoacetica ATCC 39073]
Length = 121
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L +Y S + A ++ +V A ++ +K L+ST N TA VG ++A++ALA
Sbjct: 31 LSVYRSLRHIYAQVIDDTRGVTLVAASTLDPALK-GLESTGNITAARKVGELIARKALAK 89
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I+ VV+ R G G++ V + + G+N
Sbjct: 90 GINKVVFD-RGGNIYHGRIAAVAEGAREAGLN 120
>gi|319787909|ref|YP_004147384.1| 50S ribosomal protein L18 [Pseudoxanthomonas suwonensis 11-1]
gi|317466421|gb|ADV28153.1| ribosomal protein L18 [Pseudoxanthomonas suwonensis 11-1]
Length = 118
Score = 38.5 bits (88), Expect = 4.9, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
SKV+ A+++ D+K L + +N A VG ++A+RA A I V + R G + G++
Sbjct: 46 SKVIAAANTLQADVKEGLKNGKNTDAATKVGALIAERAKAAGIEKVAFD-RSGYRFHGRI 104
Query: 326 QIVLQAIIDNGV 337
+ + A + G+
Sbjct: 105 KALADAAREGGL 116
>gi|424795694|ref|ZP_18221517.1| 50S ribosomal protein L18 [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|433679066|ref|ZP_20510848.1| 50S ribosomal protein L18 [Xanthomonas translucens pv. translucens
DSM 18974]
gi|440732465|ref|ZP_20912394.1| 50S ribosomal protein L18 [Xanthomonas translucens DAR61454]
gi|422795352|gb|EKU24062.1| 50S ribosomal protein L18 [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|430815798|emb|CCP41393.1| 50S ribosomal protein L18 [Xanthomonas translucens pv. translucens
DSM 18974]
gi|440368746|gb|ELQ05771.1| 50S ribosomal protein L18 [Xanthomonas translucens DAR61454]
Length = 119
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
SKV+ A+++ D+K L S +N+ A VG ++A+RA A I V + R G + G++
Sbjct: 47 SKVIAAANTLQADVKDGLKSGKNSEAAVKVGKLIAERAKAAGIEKVAF-DRSGYRYHGRI 105
Query: 326 QIVLQAIIDNGVN 338
+ + A + G+
Sbjct: 106 KALADAAREGGLQ 118
>gi|365920171|ref|ZP_09444521.1| ribosomal protein L18 [Cardiobacterium valvarum F0432]
gi|364578441|gb|EHM55645.1| ribosomal protein L18 [Cardiobacterium valvarum F0432]
Length = 118
Score = 38.5 bits (88), Expect = 5.1, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 228 RVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTR 287
R+R ++L L ++ + + A I+ S+V+V A ++ +K DL T
Sbjct: 8 RMRRAKRSRLNIREAGKISLIVHKTPKHMYAQIISADGSRVLVDASTLQLGVKTDLKYTG 67
Query: 288 NATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
N A A VG ++AQ+A ++DVV+ R G + G+++ + A + G+N
Sbjct: 68 NIEAAAKVGRLIAQKAKELGLYDVVFD-RSGFRYHGRVKALADAAREIGLN 117
>gi|373469470|ref|ZP_09560656.1| ribosomal protein L18 [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371764430|gb|EHO52841.1| ribosomal protein L18 [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 122
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+L+ P L ++ S + A I+ VV A ++ K ++ +L T + A A
Sbjct: 20 NRLSGTTERP-RLAVFRSNNHMYAQIIDDTVGNTVVSASTLEKSVREELSKTNDVDAAAY 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
VG ++A+RAL I VV+ R G +GK+
Sbjct: 79 VGTLVAKRALEKGIDKVVF-DRGGFIYQGKI 108
>gi|392576399|gb|EIW69530.1| hypothetical protein TREMEDRAFT_39108 [Tremella mesenterica DSM
1558]
Length = 472
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 155 RRKSSKTKEGNKDSEKKEASKAK-----TDKKECQKKEALKRKSDAKESKRKESPRPNLA 209
R +S T+EGNK+ E+ K K T KK+ +K L++ S+ K + RKE P+P A
Sbjct: 158 RSESKSTEEGNKEEAAPESKKEKDAPEDTHKKQEEKAPKLEKSSEEKPAPRKEEPKP--A 215
Query: 210 SRDDE 214
S+ DE
Sbjct: 216 SKKDE 220
>gi|448623848|ref|ZP_21670119.1| V-type ATP synthase subunit D [Haloferax denitrificans ATCC 35960]
gi|445751686|gb|EMA03118.1| V-type ATP synthase subunit D [Haloferax denitrificans ATCC 35960]
Length = 285
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 59/107 (55%), Gaps = 12/107 (11%)
Query: 125 EIDNMRIRGDLFYKLDKDSKEFEEYSFDFHRRKSSKTKEGNKDSEKKEASKAKTDKKECQ 184
E++ RIR L D +E EE F +K + + +E++EA + +T+++E +
Sbjct: 182 EVEKRRIRRYL------DEREQEERFRQFR----TKQRNERRQAERREAERQETEQREAE 231
Query: 185 KKEALKRKSDAKESKRKESPRPNLASRDDEFNKIVMSDDNVEKRVRT 231
++EA +++++ +E++R+E+ R R+ E + + E+RV T
Sbjct: 232 RQEAERQEAERQEAERQEAERQEAEQREAERQEAEQQEG--ERRVET 276
>gi|315652338|ref|ZP_07905330.1| 50S ribosomal protein L18 [Lachnoanaerobaculum saburreum DSM 3986]
gi|419719291|ref|ZP_14246577.1| ribosomal protein L18 [Lachnoanaerobaculum saburreum F0468]
gi|315485461|gb|EFU75851.1| 50S ribosomal protein L18 [Lachnoanaerobaculum saburreum DSM 3986]
gi|383304617|gb|EIC96016.1| ribosomal protein L18 [Lachnoanaerobaculum saburreum F0468]
Length = 122
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+L P L ++ S + A I+ VV A ++ K +K +L T + A A
Sbjct: 20 NRLCGTTERPR-LAVFRSNNHMYAQIIDDTVGNTVVSASTLEKSVKSELSKTNDVDAAAY 78
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
VG ++A+RAL I VV+ R G +GK+
Sbjct: 79 VGTLVAKRALEKGIDKVVF-DRGGFIYQGKI 108
>gi|285017336|ref|YP_003375047.1| 50S ribosomal protein L18 [Xanthomonas albilineans GPE PC73]
gi|283472554|emb|CBA15059.1| probable 50s ribosomal protein l18 [Xanthomonas albilineans GPE
PC73]
Length = 119
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
+KV+ A+++ D+K L + +N+ A A VG ++A+RA A I V + R G + G++
Sbjct: 47 AKVLAAANTLQADVKDGLKNGKNSDAAAKVGKLIAERAKAAGIEKVAF-DRSGYRYHGRI 105
Query: 326 QIVLQAIIDNGV 337
+ + +A + G+
Sbjct: 106 KALAEAAREGGL 117
>gi|29653606|ref|NP_819298.1| 50S ribosomal protein L18 [Coxiella burnetii RSA 493]
gi|153209776|ref|ZP_01947504.1| ribosomal protein L18 [Coxiella burnetii 'MSU Goat Q177']
gi|154705932|ref|YP_001425166.1| 50S ribosomal protein L18 [Coxiella burnetii Dugway 5J108-111]
gi|161829952|ref|YP_001596201.1| 50S ribosomal protein L18 [Coxiella burnetii RSA 331]
gi|165924139|ref|ZP_02219971.1| ribosomal protein L18 [Coxiella burnetii Q321]
gi|212213234|ref|YP_002304170.1| 50S ribosomal protein L18 [Coxiella burnetii CbuG_Q212]
gi|212218090|ref|YP_002304877.1| 50S ribosomal protein L18 [Coxiella burnetii CbuK_Q154]
gi|73621588|sp|Q83ER0.1|RL18_COXBU RecName: Full=50S ribosomal protein L18
gi|189041548|sp|A9KD15.1|RL18_COXBN RecName: Full=50S ribosomal protein L18
gi|189041549|sp|A9NAY6.1|RL18_COXBR RecName: Full=50S ribosomal protein L18
gi|226723306|sp|B6J5E8.1|RL18_COXB1 RecName: Full=50S ribosomal protein L18
gi|226723307|sp|B6J247.1|RL18_COXB2 RecName: Full=50S ribosomal protein L18
gi|29540868|gb|AAO89812.1| LSU ribosomal protein L18P [Coxiella burnetii RSA 493]
gi|120575253|gb|EAX31877.1| ribosomal protein L18 [Coxiella burnetii 'MSU Goat Q177']
gi|154355218|gb|ABS76680.1| LSU ribosomal protein L18P [Coxiella burnetii Dugway 5J108-111]
gi|161761819|gb|ABX77461.1| ribosomal protein L18 [Coxiella burnetii RSA 331]
gi|165916421|gb|EDR35025.1| ribosomal protein L18 [Coxiella burnetii Q321]
gi|212011644|gb|ACJ19025.1| LSU ribosomal protein L18P [Coxiella burnetii CbuG_Q212]
gi|212012352|gb|ACJ19732.1| LSU ribosomal protein L18P [Coxiella burnetii CbuK_Q154]
Length = 117
Score = 38.1 bits (87), Expect = 6.2, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A ++ SKV+V A ++ K+++ + N A A+G ++AQRA
Sbjct: 26 LCVHRSLNHIYAQLISPRDSKVLVCASTLEKEVRSQIKHGGNIQAATAIGKLIAQRAKKA 85
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
+ V + R G K G+++ + +A+ + G+
Sbjct: 86 GVTKVAFD-RSGYKYHGRVRALAEAVREGGI 115
>gi|27881943|gb|AAH44500.1| Wu:fc32f04 protein [Danio rerio]
Length = 678
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 158 SSKTKEGNKDSEKKEASKAKTDKKECQKKEALKRKSDAKESKRKESPRPNLASRDDEFNK 217
S K + G +SE KEA K +++KKE +K+E K +SD KE+KRKE +R E
Sbjct: 578 SEKREAGKSESEMKEARKNESEKKEARKRETRKSESDMKEAKRKE-------TRKSESEI 630
Query: 218 IVMSDDNVEKRVRTPTFNQLTAPYHE 243
V D++ EKR T +++ A E
Sbjct: 631 KVAKDNDSEKRETTKNESEIEAKNKE 656
>gi|418465570|ref|ZP_13036504.1| 50S ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359755842|gb|EHK90004.1| 50S ribosomal protein L18 [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 117
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
S+V+ A ++ K + + T N A A VG I+A+RALA + DV + R G K G++
Sbjct: 45 SEVLATASTVEKVISEQVKYTGNKDAAAVVGKIVAERALAKGVKDVAF-DRSGFKYHGRI 103
Query: 326 QIVLQAIIDNGVN 338
Q + A + G+
Sbjct: 104 QSLADAAREAGLQ 116
>gi|456062403|ref|YP_007501373.1| ribosomal protein L18 [beta proteobacterium CB]
gi|455439700|gb|AGG32638.1| ribosomal protein L18 [beta proteobacterium CB]
Length = 117
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L + S + + A + +KVV A ++ KD++ + + NA A +G ++A+RA+
Sbjct: 26 LTVIRSNSHISAQVYSPCGTKVVAAASTMEKDLRQAIKNGGNADAAKQIGKLVAERAVKA 85
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I DV + R G + G+++ + +A + G+
Sbjct: 86 GIVDVAF-DRSGHRYHGRIKALAEAAREAGL 115
>gi|289449520|ref|YP_003475768.1| 50S ribosomal protein L18 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184067|gb|ADC90492.1| ribosomal protein L18 [Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 120
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S A + A ++ V+ K +V A S+ K+ K + N A AVG ++A+RA A
Sbjct: 31 LAVFRSLAHIYAQVIDDVSGKTLVSASSLDKEAKVEYGG--NIAAAKAVGALVAERAKAA 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
I DVV+ R G G++ + +A + G+N
Sbjct: 89 GIEDVVF-DRGGYVYHGRVAALAEAAREAGLN 119
>gi|58427784|gb|AAW76821.1| 50S ribosomal protein L18 [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 90
Score = 38.1 bits (87), Expect = 7.0, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
SKV+ A+++ D+K L + +N+ A VG ++A+RA A I V + R G + G++
Sbjct: 18 SKVIAAANTLQADVKDGLKNGKNSDAAVKVGKLIAERAKAAGIEKVAFD-RSGYRYHGRI 76
Query: 326 QIVLQAIIDNGV 337
+ + A + G+
Sbjct: 77 KALADAAREGGL 88
>gi|52426087|ref|YP_089224.1| 50S ribosomal protein L18 [Mannheimia succiniciproducens MBEL55E]
gi|73621616|sp|Q65QX1.1|RL18_MANSM RecName: Full=50S ribosomal protein L18
gi|52308139|gb|AAU38639.1| RplR protein [Mannheimia succiniciproducens MBEL55E]
Length = 117
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
S+V+ A ++ K + + T N A A VG ++A+RALA I DV + R G K G++
Sbjct: 45 SEVLAAASTVEKAISEQVKYTGNKDAAAVVGKLVAERALAKGIKDVAF-DRSGFKYHGRV 103
Query: 326 QIVLQAIIDNGVN 338
Q + A + G+
Sbjct: 104 QSLADAAREAGLQ 116
>gi|387928094|ref|ZP_10130772.1| 50S ribosomal protein L18 [Bacillus methanolicus PB1]
gi|387587680|gb|EIJ80002.1| 50S ribosomal protein L18 [Bacillus methanolicus PB1]
Length = 120
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L+++ S + A ++ V + A ++ KD+ +L+ST N A VG ++A+RA+
Sbjct: 31 LNVFRSNKHIYAQLIDDVNGVTIASASTLDKDL--NLESTANIEAAQKVGELVAKRAVEK 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I VV+ R G G+++ + +A +NG+
Sbjct: 89 GIKTVVF-DRGGYLYHGRVKALAEAARENGL 118
>gi|342217286|ref|ZP_08709933.1| ribosomal protein L18 [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341588176|gb|EGS31576.1| ribosomal protein L18 [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 120
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 235 NQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAA 294
N+++ +P L +Y S A + A ++ V + A ++ K + +LDST+N A A
Sbjct: 20 NKVSGTSEKP-RLSVYRSDAHIYAQLIDDVAGHTLAQASTLDKTL--ELDSTKNMDAAKA 76
Query: 295 VGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
VG ++A+RA I + V+ R G G++
Sbjct: 77 VGTLIAERAKEKGIEEAVF-DRSGYIYHGRI 106
>gi|407716956|ref|YP_006838236.1| 50S ribosomal protein L18 [Cycloclasticus sp. P1]
gi|407257292|gb|AFT67733.1| 50S ribosomal protein L18 [Cycloclasticus sp. P1]
Length = 117
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 266 SKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKL 325
SKV+V A ++ D+K + + N A + VG +A+RA+ I +V + R G K G++
Sbjct: 45 SKVLVSASTLLSDIKSSVKNCGNIEAASVVGKTIAERAVEAGIKEVAF-DRSGYKYHGRV 103
Query: 326 QIVLQAIIDNGV 337
+ + A +NG+
Sbjct: 104 KALADAARENGL 115
>gi|386817432|ref|ZP_10104650.1| LSU ribosomal protein L18P [Thiothrix nivea DSM 5205]
gi|386422008|gb|EIJ35843.1| LSU ribosomal protein L18P [Thiothrix nivea DSM 5205]
Length = 117
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L I+ + + A +V S+V+ A ++ KD++ LD T N A AAVG ++A+RALA
Sbjct: 26 LSIHRTSMHIYAQVVTSDGSQVLASASTLDKDLRTGLDYTGNVAAAAAVGKLVAERALAK 85
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGV 337
I V + R G K G+++ + + G+
Sbjct: 86 GIDSVAF-DRSGFKYHGRIKALADGAREAGL 115
>gi|298291454|ref|YP_003693393.1| 50S ribosomal protein L18 [Starkeya novella DSM 506]
gi|296927965|gb|ADH88774.1| ribosomal protein L18 [Starkeya novella DSM 506]
Length = 120
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L ++ S + A I+ + A S+ KD++ L + + A A+G ++A+RA+A
Sbjct: 29 LSVHRSSKHIYAQIIDDARGVTIAAASSLEKDLRGSLKTGADIAAAQAIGKLVAERAVAA 88
Query: 307 DIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
+ DVV+ R G+++ + +A + G+N
Sbjct: 89 GVKDVVF-DRGAFIYHGRVKALAEAAREGGLN 119
>gi|225376424|ref|ZP_03753645.1| hypothetical protein ROSEINA2194_02066 [Roseburia inulinivorans DSM
16841]
gi|225211800|gb|EEG94154.1| hypothetical protein ROSEINA2194_02066 [Roseburia inulinivorans DSM
16841]
Length = 122
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 223 DNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFD 282
+N +R+R + L P L ++ S + A I+ +V A ++ K++K +
Sbjct: 12 ENKHRRMR----HHLAGTAQRP-RLAVFRSNNHMYAQIIDDTVGNTLVSASTLDKELKAE 66
Query: 283 LDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVN 338
L+ T N A + +G ++A++AL I VV+ R G +GK++ + A + G++
Sbjct: 67 LEKTNNVDAASKLGTVIAKKALDKGITTVVF-DRGGFIYQGKVKALADAAREAGLD 121
>gi|323141372|ref|ZP_08076263.1| ribosomal protein L18 [Phascolarctobacterium succinatutens YIT
12067]
gi|322414121|gb|EFY04949.1| ribosomal protein L18 [Phascolarctobacterium succinatutens YIT
12067]
Length = 123
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 247 LDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALAD 306
L++Y S +++ A +++ T + + A ++ KD+K + N A AVG +A++ALA
Sbjct: 34 LNVYRSLSNIYAQVINDETGETIAAASTVEKDLKENYGG--NIEAAKAVGKAIAEKALAK 91
Query: 307 DIHDVVY 313
+ +VV+
Sbjct: 92 GVKEVVF 98
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.128 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,282,550,763
Number of Sequences: 23463169
Number of extensions: 226332849
Number of successful extensions: 1553759
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1844
Number of HSP's successfully gapped in prelim test: 5989
Number of HSP's that attempted gapping in prelim test: 1412922
Number of HSP's gapped (non-prelim): 87007
length of query: 357
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 214
effective length of database: 9,003,962,200
effective search space: 1926847910800
effective search space used: 1926847910800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)