BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018390
(356 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 140/316 (44%), Gaps = 23/316 (7%)
Query: 43 LPPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCTPET 102
+PPG+ G P LG L+ + +D D F ++G ++K+ LF I +
Sbjct: 13 IPPGDFGLPWLGETLNFL-----NDGD-FGKKRQQQFG--PIFKTRLFGKNVIFISGALA 64
Query: 103 CKHVLM-DNEKFGRGNPESTKELLGKQTVSLSTEE-HKRLRKLTTNPFRGDKALTMYVGY 160
+ + + E F P ST+ LLG ++ E H+ RK+ F + L Y+
Sbjct: 65 NRFLFTKEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFL-PRTLDSYLPK 123
Query: 161 IEDIVIDMLDELGSINKPVVFLFEMRKLAFKVIGHIVFGTTSDHLLELMEKYYTDLLLGL 220
++ IV L++ G N+ V++ ++R++ F V + G +L ++ + GL
Sbjct: 124 MDGIVQGYLEQWGKANE-VIWYPQLRRMTFDVAATLFMGEKVSQNPQLF-PWFETYIQGL 181
Query: 221 RSPAINIPGFAFHGXXXXXXXXXXXXXXXXXXXXXRSGIEQKKGQKGMIDLLLEAEDENG 280
S I +P F ++ +Q ++ + +LL A D+N
Sbjct: 182 FSLPIPLPNTLF-----GKSQRARALLLAELEKIIKARQQQPPSEEDALGILLAARDDNN 236
Query: 281 KKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPSTQK 340
+ L + D +++ L AGHE+ A L L QH ++ ++ +QEQ ++ +
Sbjct: 237 QPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKL-----QLSQ 291
Query: 341 GLTLEEIKQMDYLAKV 356
LT E +K+M YL +V
Sbjct: 292 ELTAETLKKMPYLDQV 307
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 123/339 (36%), Gaps = 45/339 (13%)
Query: 45 PGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVD-----RYGRT-GVYKSHLFWSPSIVVC 98
PG P LGN+LS K F C+ D +YG+ G Y P + +
Sbjct: 19 PGPTPLPFLGNILSYHKGF----------CMFDMECHKKYGKVWGFYDGQ---QPVLAIT 65
Query: 99 TPETCKHVLMDN--EKFGRGNPESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALTM 156
P+ K VL+ F P + EE KRLR L + F K M
Sbjct: 66 DPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEM 125
Query: 157 Y--VGYIEDIVIDMLDELGSINKPVVFLFEMRKLAFKVIGHIVFGTTSDHLLELMEKYYT 214
+ D+++ L KPV + VI FG D L + +
Sbjct: 126 VPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVE 185
Query: 215 DLLLGLRSPAINIPGF----AFHGXXXXXXXXXXXXXXXXXXXXXRSGIEQKK------G 264
+ LR ++ P F F R +++ K
Sbjct: 186 NTKKLLRFDFLD-PFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDT 244
Query: 265 QKGMIDLLL-------EAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQH 317
QK +D L E E+ K L D+ ++ II + AG+E+++ + + L H
Sbjct: 245 QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATH 304
Query: 318 PEMLQKAKQEQEEIIKRRPSTQKGLTLEEIKQMDYLAKV 356
P++ QK ++E + ++ + T + + QM+YL V
Sbjct: 305 PDVQQKLQEEIDAVLPNKAPP----TYDTVLQMEYLDMV 339
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 123/339 (36%), Gaps = 45/339 (13%)
Query: 45 PGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVD-----RYGRT-GVYKSHLFWSPSIVVC 98
PG P LGN+LS K F C+ D +YG+ G Y P + +
Sbjct: 18 PGPTPLPFLGNILSYHKGF----------CMFDMECHKKYGKVWGFYDGQ---QPVLAIT 64
Query: 99 TPETCKHVLMDN--EKFGRGNPESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALTM 156
P+ K VL+ F P + EE KRLR L + F K M
Sbjct: 65 DPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEM 124
Query: 157 Y--VGYIEDIVIDMLDELGSINKPVVFLFEMRKLAFKVIGHIVFGTTSDHLLELMEKYYT 214
+ D+++ L KPV + VI FG D L + +
Sbjct: 125 VPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVE 184
Query: 215 DLLLGLRSPAINIPGF----AFHGXXXXXXXXXXXXXXXXXXXXXRSGIEQKK------G 264
+ LR ++ P F F R +++ K
Sbjct: 185 NTKKLLRFDFLD-PFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDT 243
Query: 265 QKGMIDLLL-------EAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQH 317
QK +D L E E+ K L D+ ++ II + AG+E+++ + + L H
Sbjct: 244 QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATH 303
Query: 318 PEMLQKAKQEQEEIIKRRPSTQKGLTLEEIKQMDYLAKV 356
P++ QK ++E + ++ + T + + QM+YL V
Sbjct: 304 PDVQQKLQEEIDAVLPNKAPP----TYDTVLQMEYLDMV 338
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 123/339 (36%), Gaps = 45/339 (13%)
Query: 45 PGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVD-----RYGRT-GVYKSHLFWSPSIVVC 98
PG P LGN+LS K F C+ D +YG+ G Y P + +
Sbjct: 17 PGPTPLPFLGNILSYHKGF----------CMFDMECHKKYGKVWGFYDGQ---QPVLAIT 63
Query: 99 TPETCKHVLMDN--EKFGRGNPESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALTM 156
P+ K VL+ F P + EE KRLR L + F K M
Sbjct: 64 DPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEM 123
Query: 157 Y--VGYIEDIVIDMLDELGSINKPVVFLFEMRKLAFKVIGHIVFGTTSDHLLELMEKYYT 214
+ D+++ L KPV + VI FG D L + +
Sbjct: 124 VPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVE 183
Query: 215 DLLLGLRSPAINIPGF----AFHGXXXXXXXXXXXXXXXXXXXXXRSGIEQKK------G 264
+ LR ++ P F F R +++ K
Sbjct: 184 NTKKLLRFDFLD-PFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDT 242
Query: 265 QKGMIDLLL-------EAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQH 317
QK +D L E E+ K L D+ ++ II + AG+E+++ + + L H
Sbjct: 243 QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATH 302
Query: 318 PEMLQKAKQEQEEIIKRRPSTQKGLTLEEIKQMDYLAKV 356
P++ QK ++E + ++ + T + + QM+YL V
Sbjct: 303 PDVQQKLQEEIDAVLPNKAPP----TYDTVLQMEYLDMV 337
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 123/314 (39%), Gaps = 22/314 (7%)
Query: 49 GWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCTPETCKHVLM 108
G PLLG+ L + DP +F+ L D +G V + L V PE + +
Sbjct: 30 GVPLLGHGWRLAR-----DPLAFMSQLRD-HG--DVVRIKLGPKTVYAVTNPELTGALAL 81
Query: 109 DNEKFGRGNP--ESTKELLGKQTVSLSTEE-HKRLRKLTTNPFRGDKALTMYVGYIEDIV 165
N + P ES + LLGK+ V+ + H+R R+ FR D A+ Y G I +
Sbjct: 82 -NPDYHIAGPLWESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLD-AIPAY-GPIMEEE 138
Query: 166 IDMLDELGSINKPVVFLFEMRKLAFKVIGHIVF-GTTSDHLLELMEKYYTDLLLGLRSPA 224
L E K V E ++A +V + G D E + + G+
Sbjct: 139 AHALTERWQPGKTVDATSESFRVAVRVAARCLLRGQYMDERAERLCVALATVFRGMYRRM 198
Query: 225 INIPGFAFHGXXXXXXXXXXXXXXXXXXXXXRSGIEQKKGQK--GMIDLLLEAEDENGKK 282
+ G + + GQK ++ LLEA+D+NG
Sbjct: 199 VVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKPDDLLTALLEAKDDNGDP 258
Query: 283 LEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPSTQKGL 342
+ + I D ++ L G E+ A MW + L HPE + + E E + RP +
Sbjct: 259 IGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRP-----V 313
Query: 343 TLEEIKQMDYLAKV 356
E+++++ + V
Sbjct: 314 AFEDVRKLRHTGNV 327
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 125/294 (42%), Gaps = 22/294 (7%)
Query: 78 RYGRTGVYKSHLFWSPSIVVCTPETCKHVLM------DNEKFGRGNPESTKELLGKQTVS 131
+YG V + ++F S++V +PE+ K LM D++ + + L G+ VS
Sbjct: 22 KYG--PVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVS 79
Query: 132 LSTEE--HKRLRKLTTNPFRGDKALTMYVGYIE--DIVIDMLDELGSINKPVVFLFEMRK 187
E HK+ R++ F +++ + E + ++++L+ PV +
Sbjct: 80 ECNYERWHKQ-RRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTY 138
Query: 188 LAFKVIGHIVFGTTSDHLLELMEKYYTDLLLGLRSPAINIPGFAFHGXXXXXXXXXXXXX 247
A ++ FG + LL + + L L + A
Sbjct: 139 TAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLPGKRKQLREVRES 198
Query: 248 XXXXXXXXRSGIEQ-----KKGQKGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHES 302
R +++ K+G++ D+L + +D ++D + +AGHE+
Sbjct: 199 IRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDDEGLLDNFVTFFIAGHET 258
Query: 303 SAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPSTQKGLTLEEIKQMDYLAKV 356
SA+ + V+ L++ PE++ + + E +E+I +++ L E++ ++ YL++V
Sbjct: 259 SANHLAFTVMELSRQPEIVARLQAEVDEVI----GSKRYLDFEDLGRLQYLSQV 308
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 139/345 (40%), Gaps = 47/345 (13%)
Query: 40 KNSLPPGEMGWPLLGNML-----SLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPS 94
K LPPG P++GNML + K+F + YG V+ + +P
Sbjct: 8 KGKLPPGPTPLPIIGNMLQIDVKDICKSFTN---------FSKVYG--PVFTVYFGMNPI 56
Query: 95 IVVCTPETCKHVLMDN-EKF-GRGN-PESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGD 151
+V E K L+DN E+F GRGN P S + G +S + + K +R+ + R
Sbjct: 57 VVFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLGIISSNGKRWKEIRRFSLTTLRN- 115
Query: 152 KALTMYVGYIEDIVID----MLDELGSIN-KPVVFLFEMRKLAFKVIGHIVFGTTSDH-- 204
M IED V + +++EL P F + VI +VF D+
Sbjct: 116 --FGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKD 173
Query: 205 --LLELMEKYYTDLLLGLRSPAINIP-GFAFHGXXXXXXXXXXXXXXXXXXXXXRSGIEQ 261
L LM+++ + + L SP I + F R +++
Sbjct: 174 QNFLTLMKRFNENFRI-LNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKE 232
Query: 262 KKGQ------KGMIDLLL---EAEDENGKKLEDVHIIDLLIINL-LAGHESSAHASMWAV 311
+ + ID L E E +N K ++ + + +L +AG E+++ + +
Sbjct: 233 HQASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGL 292
Query: 312 LYLNQHPEMLQKAKQEQEEIIKRRPSTQKGLTLEEIKQMDYLAKV 356
L L +HPE+ K ++E + +I R + +++ M Y V
Sbjct: 293 LLLLKHPEVTAKVQEEIDHVIGR----HRSPCMQDRSHMPYTDAV 333
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 40 KNSLPPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCT 99
K LPPG P +GN L L + + + + +RYG V+ HL +V+C
Sbjct: 8 KGKLPPGPTPLPFIGNYLQL----NTEQMYNSLMKISERYG--PVFTIHLGPRRVVVLCG 61
Query: 100 PETCKHVLMDN-EKF-GRGNPESTKELLGKQTVSLST-EEHKRLRKLTTNPFR----GDK 152
+ + L+D E+F GRG + + V S E K+LR+ + R G +
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKR 121
Query: 153 ALTMYVGYIEDIVIDMLDELGSIN-KPVVFLFEMRKLAFKVIGHIVFGTTSDH 204
+ + +ID L G N P FL + VI IVFG D+
Sbjct: 122 GIEERIQEEAGFLIDALRGTGGANIDPTFFL---SRTVSNVISSIVFGDRFDY 171
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 131/344 (38%), Gaps = 45/344 (13%)
Query: 40 KNSLPPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCT 99
K LPPG P +GN L L + + + + +RYG V+ HL +V+C
Sbjct: 8 KGKLPPGPTPLPFIGNYLQL----NTEQMYNSLMKISERYG--PVFTIHLGPRRVVVLCG 61
Query: 100 PETCKHVLMDN-EKF-GRGNPESTKELLGKQTVSLST-EEHKRLRKLTTNPFR----GDK 152
+ + L+D E+F GRG + + V S E K+LR+ + R G +
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKR 121
Query: 153 ALTMYVGYIEDIVIDMLDELGSIN-KPVVFLFEMRKLAFKVIGHIVFGTTSDH------- 204
+ + +ID L G N P FL + VI IVFG D+
Sbjct: 122 GIEERIQEEAGFLIDALRGTGGANIDPTFFL---SRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 205 LLELM--EKYYTDLLLG-----LRSPAINIPGFAFHGXXXXXXXXXXXXXXXXXXXXXRS 257
LL +M +T G S ++PG +
Sbjct: 179 LLRMMLGSFQFTSTSTGQLYEMFSSVMKHLPG---PQQQAFQLLQGLEDFIAKKVEHNQR 235
Query: 258 GIEQKKGQKGMIDLLLEAEDENGKKLEDVHIIDLLIINL---LAGHESSAHASMWAVLYL 314
++ + + L+ ++E + ++ +L++ L AG E+ + + L L
Sbjct: 236 TLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLL 295
Query: 315 NQHPEMLQKAKQEQEEII--KRRPSTQKGLTLEEIKQMDYLAKV 356
+HPE+ K +E + +I R+P E+ +M Y+ V
Sbjct: 296 MKHPEVEAKVHEEIDRVIGKNRQPK------FEDRAKMPYMEAV 333
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 40 KNSLPPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCT 99
K LPPG P +GN L L + + + + +RYG V+ HL +V+C
Sbjct: 8 KGKLPPGPTPLPFIGNYLQL----NTEQMYNSLMKISERYG--PVFTIHLGPRRVVVLCG 61
Query: 100 PETCKHVLMDN-EKF-GRGNPESTKELLGKQTVSLST-EEHKRLRKLTTNPFR----GDK 152
+ + L+D E+F GRG + + V S E K+LR+ + R G +
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKR 121
Query: 153 ALTMYVGYIEDIVIDMLDELGSIN-KPVVFLFEMRKLAFKVIGHIVFGTTSDH 204
+ + +ID L G N P FL + VI IVFG D+
Sbjct: 122 GIEERIQEEAGFLIDALRGTGGANIDPTFFL---SRTVSNVISSIVFGDRFDY 171
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 40 KNSLPPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCT 99
K LPPG P +GN L L + + + + +RYG V+ HL +V+C
Sbjct: 8 KGKLPPGPTPLPFIGNYLQL----NTEQMYNSLMKISERYG--PVFTIHLGPRRVVVLCG 61
Query: 100 PETCKHVLMDN-EKF-GRGNPESTKELLGKQTVSLST-EEHKRLRKLTTNPFR----GDK 152
+ + L+D E+F GRG + + V S E K+LR+ + R G +
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKR 121
Query: 153 ALTMYVGYIEDIVIDMLDELGSIN-KPVVFLFEMRKLAFKVIGHIVFGTTSDH 204
+ + +ID L G N P FL + VI IVFG D+
Sbjct: 122 GIEERIQEEAGFLIDALRGTGGANIDPTFFL---SRTVSNVISSIVFGDRFDY 171
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 40 KNSLPPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCT 99
K LPPG P +GN L L + + + + +RYG V+ HL +V+C
Sbjct: 8 KGKLPPGPTPLPFIGNYLQL----NTEQMYNSLMKISERYG--PVFTIHLGPRRVVVLCG 61
Query: 100 PETCKHVLMDN-EKF-GRGNPESTKELLGKQTVSLST-EEHKRLRKLTTNPFR----GDK 152
+ + L+D E+F GRG + + V S E K+LR+ + R G +
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKR 121
Query: 153 ALTMYVGYIEDIVIDMLDELGSIN-KPVVFLFEMRKLAFKVIGHIVFGTTSDH 204
+ + +ID L G N P FL + VI IVFG D+
Sbjct: 122 GIEERIQEEAGFLIDALRGTGGANIDPTFFL---SRTVSNVISSIVFGDRFDY 171
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 40 KNSLPPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCT 99
K LPPG P +GN L L + + + + +RYG V+ HL +V+C
Sbjct: 8 KGKLPPGPTPLPFIGNYLQL----NTEQMYNSLMKISERYG--PVFTIHLGPRRVVVLCG 61
Query: 100 PETCKHVLMDN-EKF-GRGNPESTKELLGKQTVSLST-EEHKRLRKLTTNPFR----GDK 152
+ K L+D E+F GRG + L V+ S E K+LR+ + R G +
Sbjct: 62 HDAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRRFSIATLRGFGVGKR 121
Query: 153 ALTMYVGYIEDIVIDMLDELGSIN-KPVVFLFEMRKLAFKVIGHIVFGTTSDH 204
+ + +ID L N P FL + VI IVFG D+
Sbjct: 122 GIEERIQEEAGFLIDALRGTHGANIDPTFFL---SRTVSNVISSIVFGDRFDY 171
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 133/329 (40%), Gaps = 47/329 (14%)
Query: 44 PPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCTPETC 103
PPG GWPL+G+ML+L K +P + + +YG V + + +P +V+ +T
Sbjct: 13 PPGPWGWPLIGHMLTLGK-----NPHLALSRMSQQYG--DVLQIRIGSTPVVVLSGLDTI 65
Query: 104 KHVLMDNEKFGRGNPE-STKELLGK-QTVSLSTEE------HKRLRK-------LTTNPF 148
+ L+ +G P+ T L+ Q++S S + +RL + + ++P
Sbjct: 66 RQALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPA 125
Query: 149 RGDKA-LTMYVGYIEDIVIDMLDEL----GSINKPVVFLFEMRKLAFKVIGHIVFGTTSD 203
L +V +++I L EL G N + + VI I FG D
Sbjct: 126 SSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVT----NVICAICFGRRYD 181
Query: 204 HLLELMEKYYTDL-----LLGLRSPAINIPGFAF---HGXXXXXXXXXXXXXXXXXXXXX 255
H + + ++G +PA IP +
Sbjct: 182 HNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKDLNEKFYSFMQKMVKE 241
Query: 256 RSGIEQKKGQKGMIDLLLE-----AEDENGK-KLEDVHIIDLLIINLLAGHESSAHASMW 309
+K + + D L+E DEN +L D II++++ AG ++ A W
Sbjct: 242 HYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISW 301
Query: 310 AVLYLNQHPEMLQKAKQEQEEII--KRRP 336
+++YL +P + +K ++E + +I RRP
Sbjct: 302 SLMYLVMNPRVQRKIQEELDTVIGRSRRP 330
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHES++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHES++ +A+ +L ++P +LQKA +E ++
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 305 SYK-----QVKQLKYVGMV 318
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHES++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 298
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 299 VDPVPSYKQVKQLKYVGMV 317
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVL----- 299
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 300 VDPVPSYKQVKQLKYVGMV 318
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 305 SYK-----QVKQLKYVGMV 318
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEI-IKRRP 336
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E + + P
Sbjct: 247 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 306
Query: 337 STQKGLTLEEIKQMDYLAKV 356
S +++KQ+ Y+ V
Sbjct: 307 S------YKQVKQLKYVGMV 320
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 247 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 306
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 307 SYK-----QVKQLKYVGMV 320
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 247 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 301
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 302 VDPVPSYKQVKQLKYVGMV 320
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 298
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 299 VDPVPSYKQVKQLKYVGMV 317
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 298
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 299 VDPVPSYKQVKQLKYVGMV 317
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 298
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 299 VDPVPSYKQVKQLKYVGMV 317
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 101 ETCKHVLMDNEKFGRG------NPESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKAL 154
E + VL D +F RG P + E++ +S+ EH RLR+L F +A
Sbjct: 70 EDVRAVLGDG-RFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHSRLRRLVVKAFTARRAE 128
Query: 155 TMYVGYIEDIVIDMLDELGSINKP--VVFLFEMRKLAFKVIGHIVFGTTSDH 204
++ +I +++D++ + +P +V +F R+L +VI ++ ++DH
Sbjct: 129 SLR-PRAREIAHELVDQMAATGQPADLVAMF-ARQLPVRVICELLGVPSADH 178
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 299
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 300 VDPVPSYKQVKQLKYVGMV 318
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 299
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 300 VDPVPSYKQVKQLKYVGMV 318
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 298
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 299 VDPVPSYKQVKQLKYVGMV 317
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 298
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 299 VDPVPSYKQVKQLKYVGMV 317
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 101 ETCKHVLMDNEKFGRG------NPESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKAL 154
E + VL D +F RG P + E++ +S+ EH RLR+L F +A
Sbjct: 70 EDVRAVLGDG-RFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHSRLRRLVVKAFTARRAE 128
Query: 155 TMYVGYIEDIVIDMLDELGSINKP--VVFLFEMRKLAFKVIGHIVFGTTSDH 204
++ +I +++D++ + +P +V +F R+L +VI ++ ++DH
Sbjct: 129 SLR-PRAREIAHELVDQMAATGQPADLVAMF-ARQLPVRVICELLGVPSADH 178
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 298
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 299 VDPVPSYKQVKQLKYVGMV 317
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 299
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 300 VDPVPSYKQVKQLKYVGMV 318
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 101 ETCKHVLMDNEKFGRG------NPESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKAL 154
E + VL D +F RG P + E++ +S+ EH RLR+L F +A
Sbjct: 70 EDVRAVLGDG-RFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHSRLRRLVVKAFTARRAE 128
Query: 155 TMYVGYIEDIVIDMLDELGSINKP--VVFLFEMRKLAFKVIGHIVFGTTSDH 204
++ +I +++D++ + +P +V +F R+L +VI ++ ++DH
Sbjct: 129 SLR-PRAREIAHELVDQMAATGQPADLVAMF-ARQLPVRVICELLGVPSADH 178
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 143/345 (41%), Gaps = 50/345 (14%)
Query: 40 KNSLPPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCT 99
K LPPG +P++GN+L + S F C YG V+ +L P++V+
Sbjct: 8 KGKLPPGPTPFPIIGNILQIDAKDISKSLTKFSEC----YG--PVFTVYLGMKPTVVLHG 61
Query: 100 PETCKHVLMD-NEKF-GRGNPESTKELLGKQTVSLSTEEH-KRLRKLTTNPFRGDKALTM 156
E K L+D E+F GRG+ +++ ++ S + K +R+ + R M
Sbjct: 62 YEAVKEALVDLGEEFAGRGSVPILEKVSKGLGIAFSNAKTWKEMRRFSLMTLRN---FGM 118
Query: 157 YVGYIEDIVID----MLDELGSIN-KPVVFLFEMRKLAFKVIGHIVFGTTSDH----LLE 207
IED + + +++EL N P F + VI ++F D+ L+
Sbjct: 119 GKRSIEDRIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHNRFDYKDEEFLK 178
Query: 208 LMEKYYTDLLLGLRSPAI----NIPGF--AFHGXXXXXXXXXXXXXXXXXXXXXRSGIEQ 261
LME + ++ L L +P + N P F G +E+
Sbjct: 179 LMESLHENVEL-LGTPWLQVYNNFPALLDYFPGIHKTLLKNADYIKNFI--------MEK 229
Query: 262 KKGQKGMIDL----------LLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAV 311
K + ++D+ L++ E EN + ++ + AG E+++ +++
Sbjct: 230 VKEHQKLLDVNNPRDFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSL 289
Query: 312 LYLNQHPEMLQKAKQEQEEIIKRRPSTQKGLTLEEIKQMDYLAKV 356
L L +HPE+ + ++E E +I R + +++ +M Y V
Sbjct: 290 LLLLKHPEVAARVQEEIERVIGR----HRSPCMQDRSRMPYTDAV 330
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 138/353 (39%), Gaps = 69/353 (19%)
Query: 44 PPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCTPETC 103
PP GWPLLG++L+L K +P + + RYG V + + +P +V+ +T
Sbjct: 18 PPEPWGWPLLGHVLTLGK-----NPHLALSRMSQRYG--DVLQIRIGSTPVLVLSRLDTI 70
Query: 104 KHVLMDNEKFGRGNPE--STKELLGKQTVSLSTEE------HKRLRKLTTNPFR-GDKAL 154
+ L+ +G P+ ++ + Q+++ ST+ +RL + N F
Sbjct: 71 RQALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPA 130
Query: 155 TMYVGYIEDIV-------IDMLDEL-------GSINKPVVFLFEMRKLAFKVIGHIVFGT 200
+ Y+E+ V I L EL N+ VV + VIG + FG
Sbjct: 131 SSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSV-------ANVIGAMCFGQ 183
Query: 201 ----TSDHLLELMEKY--------------YTDLLLGLRSPAINIPGFAFHGXXXXXXXX 242
+SD +L L++ + +L L +PA+ F
Sbjct: 184 HFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQ----RFKAFNQRFLWF 239
Query: 243 XXXXXXXXXXXXXRSGIEQKKGQKGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHES 302
++ + G + + +G + I++L+ AG ++
Sbjct: 240 LQKTVQEHYQDFDKNSVRDITG--ALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDT 297
Query: 303 SAHASMWAVLYLNQHPEMLQKAKQEQEEII--KRRPSTQKGLTLEEIKQMDYL 353
A W+++YL PE+ +K ++E + +I +RRP L + Q+ YL
Sbjct: 298 VTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPR------LSDRPQLPYL 344
>pdb|3OO3|A Chain A, Crystal Structure Of The Orf6 (Cyp165d3) Monooxygenase
Involved In Teicoplanin Biosynthesis
Length = 384
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 101 ETCKHVLMDNEKFGRGNP---ESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALTMY 157
+ + +L D+E+F P E+ + LL + +H RLR+ T P + +
Sbjct: 48 DEVRAILADHERFSSMRPVDDEADRALLPGILQAYDPPDHTRLRR-TVAPAYSARRMERL 106
Query: 158 VGYIEDIVIDMLDELGSINKPVVFLFEMRKLAFKVIGHIV---FGTTSDHLLEL 208
IE+IV + LD+ S+ PV F+ R A+ + +I G D EL
Sbjct: 107 RPRIEEIVEECLDDFESVGAPVDFV---RHAAWPIPAYIACEFLGVPRDDQAEL 157
>pdb|3O1A|A Chain A, Structure Of Oxye (Cyp165d3), A Cytochrome P450 Involved
In Teicoplanin Biosynthesis
Length = 417
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 101 ETCKHVLMDNEKFGRGNP---ESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALTMY 157
+ + +L D+E+F P E+ + LL + +H RLR+ T P + +
Sbjct: 81 DEVRAILADHERFSSMRPVDDEADRALLPGILQAYDPPDHTRLRR-TVAPAYSARRMERL 139
Query: 158 VGYIEDIVIDMLDELGSINKPVVFLFEMRKLAFKVIGHIV---FGTTSDHLLEL 208
IE+IV + LD+ S+ PV F+ R A+ + +I G D EL
Sbjct: 140 RPRIEEIVEECLDDFESVGAPVDFV---RHAAWPIPAYIACEFLGVPRDDQAEL 190
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L AGHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 245 ETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 305 SYK-----QVKQLKYVGMV 318
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 258 GIEQKKGQKGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQH 317
G +Q + + G++D L+ + E G L+ ++ + ++ L+AGHE++ +A L L QH
Sbjct: 204 GRKQAEPEDGLLDELIARQLEEGD-LDHDEVVMIALVLLVAGHETTVNAIALGALTLIQH 262
Query: 318 PEMLQKAKQEQEEIIKRRPSTQKGLTLEEIK 348
P EQ +++ R P G+ E ++
Sbjct: 263 P--------EQIDVLLRDPGAVSGVVEELLR 285
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L AGHE+++ +A+ +L ++P LQKA +E ++
Sbjct: 245 ETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVP 304
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 305 SHK-----QVKQLKYVGMV 318
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+ GHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 298
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 299 VDPVPSYKQVKQLKYVGMV 317
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+AGHE+++ +A+ +L ++P +LQK +E ++
Sbjct: 244 ETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVP 303
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ K ++KQ+ Y+ V
Sbjct: 304 SYK-----QVKQLKYVGMV 317
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 258 GIEQKKGQKGMID----LLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLY 313
I++++ + ID LL+A ++G+ L D + +LI LLAG +S+ S W +
Sbjct: 219 AIQKRRQSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFF 278
Query: 314 LNQHPEMLQKAKQEQEEIIKRRPSTQKGLTLEEIKQMDYLAKV 356
L + + +K EQ+ + LT +++K ++ L +
Sbjct: 279 LARDKTLQKKCYLEQKTVCG---ENLPPLTYDQLKDLNLLDRC 318
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L AGHE+++ +A+ +L ++P LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL----- 298
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 299 VDPVPSYKQVKQLKYVGMV 317
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 259 IEQKKGQKG--MIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQ 316
I+ K+GQ G ++ L+ DE+G +L ++ + I L+AGHE++ + + L
Sbjct: 222 IDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLS 281
Query: 317 HPEMLQKAKQE 327
HP+ L + +
Sbjct: 282 HPDQLAALRAD 292
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 259 IEQKKGQKG--MIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQ 316
I+ K+GQ G ++ L+ DE+G +L ++ + I L+AGHE++ + + L
Sbjct: 222 IDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLS 281
Query: 317 HPEMLQKAKQE 327
HP+ L + +
Sbjct: 282 HPDQLAALRAD 292
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 259 IEQKKGQKG--MIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQ 316
I+ K+GQ G ++ L+ DE+G +L ++ + I L+AGHE++ + + L
Sbjct: 222 IDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLS 281
Query: 317 HPEMLQKAKQE 327
HP+ L + +
Sbjct: 282 HPDQLAALRAD 292
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+ GHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 298
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 299 VDPVPSYKQVKQLKYVGMV 317
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+ GHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 298
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 299 VDPVPSYKQVKQLKYVGMV 317
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+ GHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 298
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 299 VDPVPSYKQVKQLKYVGMV 317
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I ++ L+AGHE+++ + + +L ++P +LQKA +E ++
Sbjct: 250 ETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVL----- 304
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 305 VDPVPSYKQVKQLKYVGMV 323
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+ GHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 298
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 299 VDPVPSYKQVKQLKYVGMV 317
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 278 ENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQEEIIKRRPS 337
E G+ L+D +I +I L+ GHE+++ +A+ +L ++P +LQKA +E ++
Sbjct: 244 ETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----- 298
Query: 338 TQKGLTLEEIKQMDYLAKV 356
+ +++KQ+ Y+ V
Sbjct: 299 VDPVPSYKQVKQLKYVGMV 317
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 40 KNSLPPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCT 99
K LPPG P+LGN+L + R SF+ L ++YG V+ +L P +V+C
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMD---RKGLLRSFLR-LREKYG--DVFTVYLGSRPVVVLCG 61
Query: 100 PETCKHVLMDN-EKF-GRG 116
+ + L+D E F GRG
Sbjct: 62 TDAIREALVDQAEAFSGRG 80
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 40 KNSLPPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCT 99
K LPPG P+LGN+L + R SF+ L ++YG V+ +L P +V+C
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMD---RKGLLRSFLR-LREKYG--DVFTVYLGSRPVVVLCG 61
Query: 100 PETCKHVLMDN-EKF-GRG 116
+ + L+D E F GRG
Sbjct: 62 TDAIREALVDQAEAFSGRG 80
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 40 KNSLPPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCT 99
K LPPG P+LGN+L + R SF+ L ++YG V+ +L P +V+C
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMD---RKGLLRSFLR-LREKYG--DVFTVYLGSRPVVVLCG 61
Query: 100 PETCKHVLMDN-EKF-GRG 116
+ + L+D E F GRG
Sbjct: 62 TDAIREALVDQAEAFSGRG 80
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 40 KNSLPPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCT 99
K LPPG P+LGN+L + R SF+ L ++YG V+ +L P +V+C
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMD---RKGLLRSFLR-LREKYG--DVFTVYLGSRPVVVLCG 61
Query: 100 PETCKHVLMDN-EKF-GRG 116
+ + L+D E F GRG
Sbjct: 62 TDAIREALVDQAEAFSGRG 80
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 40 KNSLPPGEMGWPLLGNMLSLIKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVCT 99
K LPPG P+LGN+L + R SF+ L ++YG V+ +L P +V+C
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMD---RKGLLRSFLR-LREKYG--DVFTVYLGSRPVVVLCG 61
Query: 100 PETCKHVLMDN-EKF-GRG 116
+ + L+D E F GRG
Sbjct: 62 TDAIREALVDQAEAFSGRG 80
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 259 IEQKKGQKG--MIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQ 316
+ K+ G + L++A ENG L D I+ L + + AGHE++ + AV+ L+
Sbjct: 202 VAAKRAAPGDDLTSALIQAS-ENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLST 260
Query: 317 HPE 319
HPE
Sbjct: 261 HPE 263
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 261 QKKGQKGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEM 320
++ Q+ MI +LL+ +++ KL + I+ +AGHE++ + +VL L QHPE
Sbjct: 199 KRHPQQDMISMLLKGREKD--KLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQ 256
Query: 321 LQKAKQ 326
L K ++
Sbjct: 257 LLKLRE 262
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 129/322 (40%), Gaps = 35/322 (10%)
Query: 40 KNSLPPGEMGWPLLGNMLSL-IKAFRSSDPDSFIHCLVDRYGRTGVYKSHLFWSPSIVVC 98
+ LPPG P++GN+L + IK S + L YG V+ + P +V+
Sbjct: 9 RGKLPPGPTPLPVIGNILQIGIKDISKS-----LTNLSKVYG--PVFTLYFGLKPIVVLH 61
Query: 99 TPETCKHVLMD-NEKF-GRG-NPESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALT 155
E K L+D E+F GRG P + + G V + ++ K +R+ + R
Sbjct: 62 GYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRN---FG 118
Query: 156 MYVGYIEDIVID----MLDELGSIN-KPVVFLFEMRKLAFKVIGHIVFGTTSDH----LL 206
M IED V + +++EL P F + VI I+F D+ L
Sbjct: 119 MGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFL 178
Query: 207 ELMEKYYTDLLLGLRSPAINIPG--------FAFHGXXXXXXXXXXXXXXXXXXXXXRSG 258
LMEK ++ + L SP I I F +
Sbjct: 179 NLMEKLNENIKI-LSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQES 237
Query: 259 IEQKKGQKGMIDLLLEAEDENGKKLEDVHIIDL--LIINLL-AGHESSAHASMWAVLYLN 315
++ Q + L++ E E + + I L ++L AG E+++ +A+L L
Sbjct: 238 MDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLL 297
Query: 316 QHPEMLQKAKQEQEEIIKRRPS 337
+HPE+ K ++E E +I R S
Sbjct: 298 KHPEVTAKVQEEIERVIGRNRS 319
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 259 IEQKKGQ--KGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQ 316
+E+K+ + ++ LL DE+G +L ++ + ++ L+AGHE++ + VL L
Sbjct: 195 LERKRTEPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLT 254
Query: 317 HPE 319
HP+
Sbjct: 255 HPD 257
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 38/69 (55%)
Query: 259 IEQKKGQKGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHP 318
++++ K + LL +G ++D +I + AGH++++ +S A++ L+++P
Sbjct: 228 VDRRSCPKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNP 287
Query: 319 EMLQKAKQE 327
E L AK +
Sbjct: 288 EQLALAKSD 296
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 88/244 (36%), Gaps = 31/244 (12%)
Query: 116 GNPESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALTMYVGYIEDIVIDMLDELGSI 175
G PE + + H RLRKL + F + M +E I ++LDE+G
Sbjct: 77 GFPEDVRNYFATNMGTSDPPTHTRLRKLVSQEFTVRRVEAMR-PRVEQITAELLDEVGDS 135
Query: 176 NKPVVFLFEMRKLAFKVIGHIVFGTTSDHLLELMEKYYTDLLLGLRSPAINIPGFAFHGX 235
+ L KVI LL + EKY + G S I +
Sbjct: 136 GVVDIVDRFAHPLPIKVICE---------LLGVDEKYRGEF--GRWSSEILV-------- 176
Query: 236 XXXXXXXXXXXXXXXXXXXXRSGIEQKKGQKG--MIDLLLEAEDENGKKLEDVHIIDLLI 293
+E+++ + G ++ L+ +D++ +L + + +
Sbjct: 177 MDPERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIAL 236
Query: 294 INLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQ-------EEIIK--RRPSTQKGLTL 344
+ LLAG ESS L HP+ L +++ EEI++ P T
Sbjct: 237 VLLLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAA 296
Query: 345 EEIK 348
EE++
Sbjct: 297 EEVE 300
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 88/244 (36%), Gaps = 31/244 (12%)
Query: 116 GNPESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALTMYVGYIEDIVIDMLDELGSI 175
G PE + + H RLRKL + F + M +E I ++LDE+G
Sbjct: 76 GFPEDVRNYFATNMGTSDPPTHTRLRKLVSQEFTVRRVEAMR-PRVEQITAELLDEVGDS 134
Query: 176 NKPVVFLFEMRKLAFKVIGHIVFGTTSDHLLELMEKYYTDLLLGLRSPAINIPGFAFHGX 235
+ L KVI LL + EKY + G S I +
Sbjct: 135 GVVDIVDRFAHPLPIKVICE---------LLGVDEKYRGEF--GRWSSEILV-------- 175
Query: 236 XXXXXXXXXXXXXXXXXXXXRSGIEQKKGQKG--MIDLLLEAEDENGKKLEDVHIIDLLI 293
+E+++ + G ++ L+ +D++ +L + + +
Sbjct: 176 MDPERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIAL 235
Query: 294 INLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQ-------EEIIK--RRPSTQKGLTL 344
+ LLAG ESS L HP+ L +++ EEI++ P T
Sbjct: 236 VLLLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAA 295
Query: 345 EEIK 348
EE++
Sbjct: 296 EEVE 299
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 263 KGQKGMIDLLLEAEDENGK-KLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEML 321
K + M+D+L+ + E G + I + I + AGH +S+ + W ++ L +H +
Sbjct: 220 KSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAY 279
Query: 322 QKAKQEQEEIIKRRPSTQKGLTLEEIKQMDYLAKV 356
E +E+ + ++ ++Q+ L V
Sbjct: 280 AAVIDELDELY----GDGRSVSFHALRQIPQLENV 310
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 263 KGQKGMIDLLLEAEDENGK-KLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEML 321
K + M+D+L+ + E G + I + I + AGH +S+ + W ++ L +H +
Sbjct: 220 KSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAY 279
Query: 322 QKAKQEQEEIIKRRPSTQKGLTLEEIKQMDYLAKV 356
E +E+ + ++ ++Q+ L V
Sbjct: 280 AAVIDELDELY----GDGRSVSFHALRQIPQLENV 310
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 263 KGQKGMIDLLLEAEDENGK-KLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEML 321
K + M+D+L+ + E G + I + I + AGH +S+ + W ++ L +H +
Sbjct: 220 KSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAY 279
Query: 322 QKAKQEQEEIIKRRPSTQKGLTLEEIKQMDYLAKV 356
E +E+ + ++ ++Q+ L V
Sbjct: 280 AAVIDELDELY----GDGRSVSFHALRQIPQLENV 310
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 263 KGQKGMIDLLLEAEDENGK-KLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEML 321
K + M+D+L+ + E G + I + I + AGH +S+ + W ++ L +H +
Sbjct: 220 KSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAY 279
Query: 322 QKAKQEQEEIIKRRPSTQKGLTLEEIKQMDYLAKV 356
E +E+ + ++ ++Q+ L V
Sbjct: 280 AAVIDELDELY----GDGRSVSFHALRQIPQLENV 310
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 13/71 (18%)
Query: 266 KGMIDLLLEA------EDENGKKLE-DVH--IIDLLIINLLAGHESSAHASMWAVLYLNQ 316
+ M D +L+ E+ G+ LE VH ++DL I G E++A WAV +L
Sbjct: 253 RDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFI----GGTETTASTLSWAVAFLLH 308
Query: 317 HPEMLQKAKQE 327
HPE+ ++ ++E
Sbjct: 309 HPEIQRRLQEE 319
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 44/219 (20%)
Query: 136 EHKRLRKLTTNPFRGDKALTMYVGYIEDIVIDMLDELG---------SINKPVVFLFEMR 186
EH+ LRK+ ++ F + ++ I D+ +L + G + PV + E+
Sbjct: 114 EHRALRKVVSSAFTP-RTISDLEPRIRDVTRSLLADAGESFDLVDVLAFPLPVTIVAEL- 171
Query: 187 KLAFKVIGHIVFGTTSDHLLELMEKYYTDLLLGLRSPAINIPGFAFHGXXXXXXXXXXXX 246
L + H FG S L+++ TD L R + P A+
Sbjct: 172 -LGLPPMDHEQFGDWSGALVDIQMDDPTDPALAERIADVLNPLTAY-------------- 216
Query: 247 XXXXXXXXXRSGIEQKKGQKG--MIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSA 304
++ +++ G +I L+ AE +G+ L+D + LLAGH ++
Sbjct: 217 --------LKARCAERRADPGDDLISRLVLAE-VDGRALDDEEAANFSTALLLAGHITTT 267
Query: 305 HASMWAVLYLNQHPEMLQKAKQEQ-------EEIIKRRP 336
V L++HP A ++ EE+++ RP
Sbjct: 268 VLLGNIVRTLDEHPAHWDAAAEDPGRIPAIVEEVLRYRP 306
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 264 GQKGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQK 323
G + ++ L+L+A D + I+ ++ + GHE+ A AVL L HP+ L
Sbjct: 201 GGEDLLALMLDAHDRG--LMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDL 258
Query: 324 AK-------QEQEEIIKRRPSTQK 340
+ Q EE ++ PS Q
Sbjct: 259 LRRRPDLLAQAVEECLRYDPSVQS 282
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 103 CKHVLMDNEKFGRGNPESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALTMYVGYIE 162
KHVLM+++ F G +++ EHK R ++ P+ + Y +IE
Sbjct: 21 VKHVLMNDKIFSSNPGNRYSNAGGISFITMDNPEHKEFRDISA-PYFLPSKINDYKDFIE 79
Query: 163 DIVIDMLDELGSINKPVVFLFEMRKLAFKVIGHIVFGTTSDHLLELMEKYYTDLLLG 219
+ D++ + NK ++ + +R L +I I+ SD L K ++D ++G
Sbjct: 80 ETSNDLIKNID--NKDIISEYAVR-LPVNIISKILGIPDSDMPL---FKLWSDYIIG 130
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 44/219 (20%)
Query: 136 EHKRLRKLTTNPFRGDKALTMYVGYIEDIVIDMLDELG---------SINKPVVFLFEMR 186
EH+ LRK+ ++ F + ++ I D+ +L + G + PV + E+
Sbjct: 94 EHRALRKVVSSAFTP-RTISDLEPRIRDVTRSLLADAGESFDLVDVLAFPLPVTIVAEL- 151
Query: 187 KLAFKVIGHIVFGTTSDHLLELMEKYYTDLLLGLRSPAINIPGFAFHGXXXXXXXXXXXX 246
L + H FG S L+++ TD L R + P A+
Sbjct: 152 -LGLPPMDHEQFGDWSGALVDIQMDDPTDPALAERIADVLNPLTAY-------------- 196
Query: 247 XXXXXXXXXRSGIEQKKGQKG--MIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSA 304
++ +++ G +I L+ AE +G+ L+D + LLAGH ++
Sbjct: 197 --------LKARCAERRADPGDDLISRLVLAE-VDGRALDDEEAANFSTALLLAGHITTT 247
Query: 305 HASMWAVLYLNQHPEMLQKAKQEQ-------EEIIKRRP 336
V L++HP A ++ EE+++ RP
Sbjct: 248 VLLGNIVRTLDEHPAHWDAAAEDPGRIPAIVEEVLRYRP 286
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 38/237 (16%)
Query: 116 GNPE-STKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALTMYVGYIEDIVIDMLDELGS 174
G PE ++ + SL +H+RLR L T+PF + +T ++ V ++D+L
Sbjct: 76 GTPEGPVRDFMVDFLQSLDGADHRRLRGLATHPFTP-RRITAVQPFVRSTVEQLIDKLPQ 134
Query: 175 INKPVVFLFEMRKLAFKVIGHIVFGTTSDHLLELM----EKYYTDLLLGLRSPAINIPGF 230
+ F + H + + +L+ E Y T +G S N+ G
Sbjct: 135 GD-------------FDFVQHFAHPLPALVMCQLLGFPLEDYDT---VGRLSIETNL-GL 177
Query: 231 AFHGXXXXXXXXXXXXXXXXXXXXXRSGIEQKKGQKG---MIDLLLEAEDENGKKLEDVH 287
A + IE++K + G D++ D L+D
Sbjct: 178 ALSNDQDILVKVEQGLGRMFDYLV--AAIEKRKVEPGDDLTSDIVRAFHD---GVLDDYE 232
Query: 288 IIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQK-------AKQEQEEIIKRRPS 337
+ L+ L+AG+E++ H A+ QHP+ K A Q EE+++ P+
Sbjct: 233 LRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPELAPQAVEEVLRWSPT 289
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 272 LLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQK-------- 323
L+EAE +G++L I I+ ++AG+E++ +A VL L+++PE +
Sbjct: 249 LVEAE-VDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGL 307
Query: 324 AKQEQEEIIK 333
A EEI++
Sbjct: 308 APTAVEEIVR 317
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 259 IEQKKGQ--KGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQ 316
+E+K+ + ++ LL D +G +L ++ + ++ L+AGHE++ + VL L
Sbjct: 195 LERKRTEPDDALLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLT 254
Query: 317 HPE 319
HP+
Sbjct: 255 HPD 257
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 88/244 (36%), Gaps = 31/244 (12%)
Query: 116 GNPESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALTMYVGYIEDIVIDMLDELGSI 175
G PE + + H RLRKL + F + M +E I ++LDE+G
Sbjct: 77 GFPEDVRNYFATNMGTSDPPTHTRLRKLVSQEFTVRRVEAMR-PRVEQITAELLDEVGDS 135
Query: 176 NKPVVFLFEMRKLAFKVIGHIVFGTTSDHLLELMEKYYTDLLLGLRSPAINIPGFAFHGX 235
+ L KVI LL + EKY + G S I +
Sbjct: 136 GVVDIVDRFAHPLPIKVICE---------LLGVDEKYRGEF--GRWSSEILV-------- 176
Query: 236 XXXXXXXXXXXXXXXXXXXXRSGIEQKKGQKG--MIDLLLEAEDENGKKLEDVHIIDLLI 293
+E+++ + G ++ L+ +D++ +L + + +
Sbjct: 177 MDPERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIAL 236
Query: 294 INLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQ-------EEIIK--RRPSTQKGLTL 344
+ LLAG E+S L HP+ L +++ EEI++ P T
Sbjct: 237 VLLLAGFETSVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAA 296
Query: 345 EEIK 348
EE++
Sbjct: 297 EEVE 300
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 88/244 (36%), Gaps = 31/244 (12%)
Query: 116 GNPESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALTMYVGYIEDIVIDMLDELGSI 175
G PE + + H RLRKL + F + M +E I ++LDE+G
Sbjct: 77 GFPEDVRNYFATNMGTSDPPTHTRLRKLVSQEFTVRRVEAMR-PRVEQITAELLDEVGDS 135
Query: 176 NKPVVFLFEMRKLAFKVIGHIVFGTTSDHLLELMEKYYTDLLLGLRSPAINIPGFAFHGX 235
+ L KVI LL + EKY + G S I +
Sbjct: 136 GVVDIVDRFAHPLPIKVICE---------LLGVDEKYRGEF--GRWSSEILV-------- 176
Query: 236 XXXXXXXXXXXXXXXXXXXXRSGIEQKKGQKG--MIDLLLEAEDENGKKLEDVHIIDLLI 293
+E+++ + G ++ L+ +D++ +L + + +
Sbjct: 177 MDPERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIAL 236
Query: 294 INLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQ-------EEIIK--RRPSTQKGLTL 344
+ LLAG E+S L HP+ L +++ EEI++ P T
Sbjct: 237 VLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAA 296
Query: 345 EEIK 348
EE++
Sbjct: 297 EEVE 300
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 88/244 (36%), Gaps = 31/244 (12%)
Query: 116 GNPESTKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALTMYVGYIEDIVIDMLDELGSI 175
G PE + + H RLRKL + F + M +E I ++LDE+G
Sbjct: 76 GFPEDVRNYFATNMGTSDPPTHTRLRKLVSQEFTVRRVEAMR-PRVEQITAELLDEVGDS 134
Query: 176 NKPVVFLFEMRKLAFKVIGHIVFGTTSDHLLELMEKYYTDLLLGLRSPAINIPGFAFHGX 235
+ L KVI LL + EKY + G S I +
Sbjct: 135 GVVDIVDRFAHPLPIKVICE---------LLGVDEKYRGEF--GRWSSEILV-------- 175
Query: 236 XXXXXXXXXXXXXXXXXXXXRSGIEQKKGQKG--MIDLLLEAEDENGKKLEDVHIIDLLI 293
+E+++ + G ++ L+ +D++ +L + + +
Sbjct: 176 MDPERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIAL 235
Query: 294 INLLAGHESSAHASMWAVLYLNQHPEMLQKAKQEQ-------EEIIK--RRPSTQKGLTL 344
+ LLAG E+S L HP+ L +++ EEI++ P T
Sbjct: 236 VLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAA 295
Query: 345 EEIK 348
EE++
Sbjct: 296 EEVE 299
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 261 QKKGQKGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEM 320
Q + G++ L+ + NG+ ++ +I ++ L+AGHE++A + +V+ L HPE
Sbjct: 208 QTEPGAGLVGALVADQLANGE-IDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQ 266
Query: 321 LQKAKQEQ 328
+ ++
Sbjct: 267 YAALRADR 274
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 261 QKKGQKGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEM 320
Q + G++ L+ + NG+ ++ +I ++ L+AGHE++A + +V+ L HPE
Sbjct: 208 QTEPGAGLVGALVADQLANGE-IDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQ 266
Query: 321 LQKAKQEQ 328
+ ++
Sbjct: 267 YAALRADR 274
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 261 QKKGQKGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEM 320
Q + G++ L+ + NG+ ++ +I ++ L+AGHE++A + +V+ L HPE
Sbjct: 208 QTEPGAGLVGALVADQLANGE-IDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQ 266
Query: 321 LQKAKQEQ 328
+ ++
Sbjct: 267 YAALRADR 274
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 261 QKKGQKGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEM 320
Q + G++ L+ + NG+ ++ +I ++ L+AGHE++A + +V+ L HPE
Sbjct: 208 QTEPGAGLVGALVADQLANGE-IDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQ 266
Query: 321 LQKAKQEQ 328
+ ++
Sbjct: 267 YAALRADR 274
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 83/220 (37%), Gaps = 31/220 (14%)
Query: 122 KELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALTMYVGYIEDIVIDMLDELGSINKPV-V 180
+EL+G + EH RLR+ T F K M YIE IV D LDE+ P +
Sbjct: 82 RELVGN-LMDYDPPEHTRLRRKLTPGFTLRKMQRM-APYIEQIVNDRLDEMERAGSPADL 139
Query: 181 FLFEMRKLAFKVIGHIVFGTTSDHLLELMEKYYTDLLLGLRSPAINIPGFAFHGXXXXXX 240
F K+ V+ +V G D M+ + L L G F
Sbjct: 140 IAFVADKVPGAVLCELV-GVPRDDRDMFMKLCHGHLDASLSQKRRAALGDKFSRYLLAMI 198
Query: 241 XXXXXXXXXXXXXXXRSGIEQKKGQKGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGH 300
E+K+ +GMI ++ E G D + + +LAG
Sbjct: 199 AR-----------------ERKEPGEGMIGAVVA---EYGDDATDEELRGFCVQVMLAGD 238
Query: 301 ESSAHASMWAVLYLNQHPEML-------QKAKQEQEEIIK 333
++ + VL + +HPE + Q A++ +E+I+
Sbjct: 239 DNISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIR 278
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 38/237 (16%)
Query: 116 GNPE-STKELLGKQTVSLSTEEHKRLRKLTTNPFRGDKALTMYVGYIEDIVIDMLDELGS 174
G PE ++ + SL +H+RLR L T+PF + +T ++ V ++D+L
Sbjct: 86 GTPEGPVRDFMVDFLQSLDGADHRRLRGLATHPFTP-RRITAVQPFVRSTVEQLIDKLPQ 144
Query: 175 INKPVVFLFEMRKLAFKVIGHIVFGTTSDHLLELM----EKYYTDLLLGLRSPAINIPGF 230
+ F + H + + +L+ E Y T +G S N+ G
Sbjct: 145 GD-------------FDFVQHFPHPLPALVMCQLLGFPLEDYDT---VGRLSIETNL-GL 187
Query: 231 AFHGXXXXXXXXXXXXXXXXXXXXXRSGIEQKKGQKG---MIDLLLEAEDENGKKLEDVH 287
A + IE++K + G D++ D L+D
Sbjct: 188 ALSNDQDILVKVEQGLGRMFDYLV--AAIEKRKVEPGDDLTSDIVRAFHD---GVLDDYE 242
Query: 288 IIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQK-------AKQEQEEIIKRRPS 337
+ L+ L+AG+E++ H A+ QHP+ K A Q EE+++ P+
Sbjct: 243 LRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPELAPQAVEEVLRWSPT 299
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 265 QKGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKA 324
+ ++ +LL+AE +G +L ++ L+ + AG +++ + +AVL L + PE L
Sbjct: 222 ENDVLTMLLQAE-ADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEAL--- 277
Query: 325 KQEQEEIIKRRPSTQKGLTLEEIKQMDYLAKV 356
E++K P + L+E+ + D + ++
Sbjct: 278 -----ELVKAEPGLMRN-ALDEVLRFDNILRI 303
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 265 QKGMIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKA 324
+ ++ +LL+AE +G +L ++ L+ + AG +++ + +AVL L + PE L+
Sbjct: 222 ENDVLTMLLQAE-ADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELV 280
Query: 325 KQE 327
K E
Sbjct: 281 KAE 283
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 259 IEQKKGQKG--MIDLLLEAEDENGKKLEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQ 316
+E+++ + G ++ L+ +D++ +L + + ++ LLAG E+S L
Sbjct: 199 VERRRTEPGDDLLSALISVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLT 258
Query: 317 HPEMLQKAKQEQ-------EEIIK--RRPSTQKGLTLEEIK 348
HP+ L + + EEI++ P T EE++
Sbjct: 259 HPDQLALVRADPSALPNAVEEILRYIAPPETTTRFAAEEVE 299
>pdb|3HDI|A Chain A, Crystal Structure Of Bacillus Halodurans Metallo Peptidase
pdb|3HDI|B Chain B, Crystal Structure Of Bacillus Halodurans Metallo Peptidase
Length = 421
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 89 LFWSPSIVVCTPETCKHVLMDNEKFGR---GNPESTKELLGKQTVSLSTEEHKRLRKLTT 145
+F +V TP+ H L+ + +G+ G P +LG +L++ LR
Sbjct: 123 VFEEIKMVDDTPDDIVHDLLSSATYGKHSLGYP-----ILGT-VETLNSFNEGMLRHYMD 176
Query: 146 NPFRGDKALTMYVGYIEDIVIDMLDELGSINKPVVFLFEMRKLAF 190
+ GD + G + D +ID + E S KP + ++ K F
Sbjct: 177 RFYTGDYVVISVAGNVHDELIDKIKETFSQVKPTTYNYQGEKPMF 221
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 283 LEDVHIIDLLIINLLAGHESSAHASMWAVLYLNQHPEMLQKAK 325
L+ ++ L + L AGHE++A+ V+ L HPE L K
Sbjct: 230 LDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVK 272
>pdb|2PMZ|B Chain B, Archaeal Rna Polymerase From Sulfolobus Solfataricus
pdb|2PMZ|R Chain R, Archaeal Rna Polymerase From Sulfolobus Solfataricus
pdb|3HKZ|B Chain B, The X-Ray Crystal Structure Of Rna Polymerase From Archaea
pdb|3HKZ|J Chain J, The X-Ray Crystal Structure Of Rna Polymerase From Archaea
Length = 1124
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 257 SGIEQKKGQKGMIDLLLEAEDENGKKLEDVHIIDLLI 293
+ I + G+ G++DL+L E G KL V + DL I
Sbjct: 835 TSIVTRHGEMGIVDLVLITETAEGNKLVKVRVRDLRI 871
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 27.7 bits (60), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 293 IINLLAGHESSAHASMWAVLYLNQHPEMLQK 323
+ L+AGHE+ A A W+ L L+ P+ ++
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKR 246
>pdb|2WAQ|B Chain B, The Complete Structure Of The Archaeal 13-Subunit Dna-
Directed Rna Polymerase
pdb|2WB1|B Chain B, The Complete Structure Of The Archaeal 13-Subunit Dna-
Directed Rna Polymerase
pdb|2WB1|R Chain R, The Complete Structure Of The Archaeal 13-Subunit Dna-
Directed Rna Polymerase
pdb|2Y0S|B Chain B, Crystal Structure Of Sulfolobus Shibatae Rna Polymerase In
P21 Space Group
pdb|2Y0S|R Chain R, Crystal Structure Of Sulfolobus Shibatae Rna Polymerase In
P21 Space Group
pdb|4AYB|B Chain B, Rnap At 3.2ang
pdb|4B1O|B Chain B, Archaeal Rnap-Dna Binary Complex At 4.32ang
pdb|4B1P|R Chain R, Archaeal Rnap-Dna Binary Complex At 4.32ang
Length = 1131
Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 257 SGIEQKKGQKGMIDLLLEAEDENGKKLEDVHIIDLLI 293
+ I + G+ G++DL+L E G KL V + DL I
Sbjct: 838 TSIVTRHGEMGIVDLVLITETAEGNKLVKVRVRDLRI 874
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,245,477
Number of Sequences: 62578
Number of extensions: 417722
Number of successful extensions: 1229
Number of sequences better than 100.0: 120
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 1121
Number of HSP's gapped (non-prelim): 149
length of query: 356
length of database: 14,973,337
effective HSP length: 100
effective length of query: 256
effective length of database: 8,715,537
effective search space: 2231177472
effective search space used: 2231177472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)