Query 018393
Match_columns 356
No_of_seqs 144 out of 716
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 14:33:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018393.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018393hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f9m_A Glucokinase; hexokinase 100.0 4E-103 1E-107 796.0 29.5 309 36-353 16-332 (470)
2 3hm8_A Hexokinase-3; glucose, 100.0 1.6E-98 6E-103 757.3 29.0 300 40-353 5-308 (445)
3 3o8m_A Hexokinase; rnaseh-like 100.0 3E-95 1E-99 742.0 32.9 316 32-354 18-339 (485)
4 1bdg_A Hexokinase; phosphotran 100.0 2.2E-86 7.6E-91 672.8 30.8 303 35-346 6-314 (451)
5 1cza_N Hexokinase type I; stru 100.0 2.8E-82 9.7E-87 689.3 32.4 300 39-346 468-773 (917)
6 2yhx_A Hexokinase B; transfera 100.0 4.1E-79 1.4E-83 620.3 28.9 302 38-352 6-311 (457)
7 1cza_N Hexokinase type I; stru 100.0 7.6E-69 2.6E-73 583.9 27.8 302 36-345 17-324 (917)
8 2qm1_A Glucokinase; alpha-beta 98.9 3.3E-08 1.1E-12 93.9 15.1 143 95-262 6-153 (326)
9 1z05_A Transcriptional regulat 98.8 1.3E-07 4.6E-12 94.0 18.7 185 43-262 58-253 (429)
10 1z6r_A MLC protein; transcript 98.8 1.8E-07 6.3E-12 92.1 19.2 189 43-262 35-231 (406)
11 2hoe_A N-acetylglucosamine kin 98.7 4.2E-07 1.4E-11 89.0 17.8 210 43-283 38-252 (380)
12 2ap1_A Putative regulator prot 98.5 1.5E-06 5E-11 83.0 13.8 138 95-262 24-165 (327)
13 2ch5_A NAGK protein; transfera 98.4 2.3E-06 8E-11 81.9 13.6 145 96-288 7-152 (347)
14 4db3_A Glcnac kinase, N-acetyl 98.3 4.9E-06 1.7E-10 79.9 13.0 137 96-262 25-165 (327)
15 3r8e_A Hypothetical sugar kina 98.3 7.1E-06 2.4E-10 78.4 12.4 144 92-262 16-163 (321)
16 2yhw_A Bifunctional UDP-N-acet 98.3 1.4E-05 4.8E-10 76.7 14.5 142 94-262 29-176 (343)
17 3vgl_A Glucokinase; ROK family 98.2 7.5E-06 2.6E-10 78.2 11.3 133 96-262 3-141 (321)
18 1woq_A Inorganic polyphosphate 98.2 5.4E-05 1.8E-09 70.3 16.2 147 92-262 9-160 (267)
19 1zxo_A Conserved hypothetical 98.1 3.4E-06 1.2E-10 79.5 7.5 122 97-261 2-124 (291)
20 3mcp_A Glucokinase; structural 98.1 1.8E-05 6.2E-10 77.8 12.8 139 93-262 7-166 (366)
21 1zbs_A Hypothetical protein PG 98.1 2E-05 6.8E-10 74.2 12.5 124 97-261 2-126 (291)
22 2aa4_A Mannac kinase, putative 98.1 2E-05 7E-10 73.5 12.4 135 96-262 2-140 (289)
23 3vov_A Glucokinase, hexokinase 98.1 3.3E-05 1.1E-09 73.3 13.3 137 97-262 3-143 (302)
24 3htv_A D-allose kinase, alloki 98.0 1.8E-05 6.2E-10 75.5 9.8 143 93-263 5-152 (310)
25 4htl_A Beta-glucoside kinase; 98.0 0.0001 3.5E-09 69.6 13.7 134 96-262 5-142 (297)
26 3epq_A Putative fructokinase; 97.9 9.7E-05 3.3E-09 70.3 12.9 133 96-262 4-142 (302)
27 2q2r_A Glucokinase 1, putative 97.8 0.00013 4.4E-09 71.0 11.1 189 95-328 29-255 (373)
28 1zc6_A Probable N-acetylglucos 97.8 0.00024 8.3E-09 67.0 12.5 123 96-260 12-138 (305)
29 2gup_A ROK family protein; sug 97.7 0.00013 4.3E-09 68.2 10.2 131 96-262 5-137 (292)
30 2e2o_A Hexokinase; acetate and 97.5 0.00018 6.2E-09 67.4 8.2 116 96-255 3-118 (299)
31 1sz2_A Glucokinase, glucose ki 97.3 0.0018 6.2E-08 61.8 12.4 128 94-262 13-157 (332)
32 1saz_A Probable butyrate kinas 96.7 0.0026 8.8E-08 62.4 7.6 145 96-262 3-194 (381)
33 3lm2_A Putative kinase; struct 96.7 0.012 4.1E-07 54.0 10.9 126 94-262 5-130 (226)
34 2p3r_A Glycerol kinase; glycer 95.3 0.037 1.3E-06 56.2 8.1 64 93-159 1-67 (510)
35 3ifr_A Carbohydrate kinase, FG 95.2 0.035 1.2E-06 56.3 7.7 63 94-159 6-71 (508)
36 3h3n_X Glycerol kinase; ATP-bi 94.9 0.066 2.2E-06 54.2 8.7 61 96-159 6-69 (506)
37 3g25_A Glycerol kinase; IDP007 94.8 0.056 1.9E-06 54.6 7.8 61 96-159 7-70 (501)
38 2dpn_A Glycerol kinase; thermu 94.7 0.094 3.2E-06 52.8 9.1 61 96-159 3-66 (495)
39 4e1j_A Glycerol kinase; struct 94.7 0.077 2.6E-06 54.0 8.4 61 96-159 27-90 (520)
40 2itm_A Xylulose kinase, xylulo 94.6 0.071 2.4E-06 53.4 8.0 59 97-158 2-63 (484)
41 3hz6_A Xylulokinase; xylulose, 94.5 0.075 2.6E-06 53.9 7.7 57 96-155 6-65 (511)
42 3ezw_A Glycerol kinase; glycer 94.3 0.082 2.8E-06 53.7 7.8 65 93-160 2-69 (526)
43 3l0q_A Xylulose kinase; xlylul 94.3 0.075 2.6E-06 54.4 7.5 61 96-159 6-69 (554)
44 3ll3_A Gluconate kinase; xylul 94.3 0.1 3.4E-06 52.8 8.2 60 96-158 5-67 (504)
45 2w40_A Glycerol kinase, putati 94.2 0.13 4.4E-06 51.9 8.9 60 96-158 5-67 (503)
46 2zf5_O Glycerol kinase; hypert 94.2 0.096 3.3E-06 52.7 7.8 61 96-159 4-67 (497)
47 2d4w_A Glycerol kinase; alpha 94.1 0.12 4.2E-06 52.1 8.6 61 96-159 3-66 (504)
48 3jvp_A Ribulokinase; PSI-II, N 93.7 0.13 4.6E-06 52.8 8.0 61 96-159 6-81 (572)
49 2uyt_A Rhamnulokinase; rhamnos 93.0 0.62 2.1E-05 46.5 11.3 79 96-182 5-91 (489)
50 3h6e_A Carbohydrate kinase, FG 90.8 0.33 1.1E-05 49.0 6.4 57 96-155 7-65 (482)
51 3bex_A Type III pantothenate k 88.8 0.85 2.9E-05 42.0 7.0 169 97-325 5-194 (249)
52 3i8b_A Xylulose kinase; strain 87.5 1.2 4E-05 45.2 7.7 53 96-154 6-59 (515)
53 3h1q_A Ethanolamine utilizatio 81.8 12 0.00042 33.4 11.1 29 210-240 110-138 (272)
54 2h3g_X Biosynthetic protein; p 79.9 13 0.00044 34.5 10.7 46 97-151 2-47 (268)
55 3djc_A Type III pantothenate k 79.9 2.5 8.4E-05 39.4 5.8 49 97-159 4-52 (266)
56 4ehu_A Activator of 2-hydroxyi 72.8 18 0.00061 32.6 9.5 36 226-261 75-111 (276)
57 4gni_A Putative heat shock pro 72.8 15 0.0005 35.2 9.3 53 207-261 165-222 (409)
58 3i33_A Heat shock-related 70 k 70.4 15 0.00053 34.9 8.8 53 207-261 173-231 (404)
59 3qfu_A 78 kDa glucose-regulate 67.9 21 0.00071 33.7 9.1 48 208-257 169-219 (394)
60 4bc3_A Xylulose kinase; transf 66.9 15 0.0005 37.2 8.2 40 219-260 269-310 (538)
61 3mdq_A Exopolyphosphatase; str 57.1 40 0.0014 31.6 8.8 62 96-157 5-68 (315)
62 2v7y_A Chaperone protein DNAK; 54.5 1E+02 0.0035 30.6 11.8 45 209-255 126-172 (509)
63 2ych_A Competence protein PILM 52.1 48 0.0016 31.0 8.5 32 206-239 151-182 (377)
64 3hi0_A Putative exopolyphospha 51.2 38 0.0013 34.1 8.0 75 80-156 2-78 (508)
65 1hux_A Activator of (R)-2-hydr 49.2 11 0.00038 34.5 3.4 31 226-256 78-108 (270)
66 4b9q_A Chaperone protein DNAK; 47.2 15 0.00052 37.7 4.4 54 208-263 151-207 (605)
67 1t6c_A Exopolyphosphatase; alp 46.2 52 0.0018 30.9 7.7 62 96-157 13-76 (315)
68 2fsj_A Hypothetical protein TA 44.3 23 0.00079 33.5 4.9 52 93-153 188-239 (346)
69 3nuw_A 2-OXO-3-deoxygalactonat 43.8 34 0.0012 32.3 5.9 51 96-154 7-57 (295)
70 1u6z_A Exopolyphosphatase; alp 37.0 87 0.003 31.4 8.1 63 96-158 12-76 (513)
71 3tai_A DNA double-strand break 33.9 37 0.0013 34.0 4.5 48 50-101 24-71 (471)
72 3t69_A Putative 2-dehydro-3-de 31.2 52 0.0018 31.6 5.0 53 96-155 8-60 (330)
73 3cer_A Possible exopolyphospha 30.1 1E+02 0.0035 29.2 6.9 63 96-158 17-82 (343)
74 1hjr_A Holliday junction resol 29.9 1.2E+02 0.0041 25.7 6.6 22 96-117 2-23 (158)
75 3aap_A Ectonucleoside triphosp 28.7 1.5E+02 0.0051 28.3 7.8 22 95-116 3-24 (353)
76 2kho_A Heat shock protein 70; 28.3 1.6E+02 0.0054 30.0 8.4 23 93-115 186-208 (605)
77 1mul_A NS2, HU-2, DNA binding 28.1 88 0.003 23.5 5.0 36 38-73 4-39 (90)
78 1p71_A DNA-binding protein HU; 27.7 94 0.0032 23.6 5.1 36 38-73 4-39 (94)
79 1b8z_A Protein (histonelike pr 26.8 91 0.0031 23.4 4.8 36 38-73 4-39 (90)
80 3rhi_A DNA-binding protein HU; 26.5 95 0.0033 23.6 4.9 35 39-73 8-42 (93)
81 2o97_B NS1, HU-1, DNA-binding 26.5 96 0.0033 23.4 4.9 36 38-73 4-39 (90)
82 3c4i_A DNA-binding protein HU 25.8 1E+02 0.0036 23.7 5.1 36 38-73 4-39 (99)
83 4b9q_A Chaperone protein DNAK; 25.6 1.3E+02 0.0046 30.6 7.3 24 93-116 186-209 (605)
84 4a2a_A Cell division protein F 25.1 4.7E+02 0.016 25.2 12.4 51 206-258 168-220 (419)
85 1owf_A IHF-alpha, integration 23.6 1.1E+02 0.0038 23.5 4.9 36 38-73 6-41 (99)
86 3arc_L Photosystem II reaction 23.0 49 0.0017 21.6 2.1 30 307-336 3-32 (37)
87 3qfu_A 78 kDa glucose-regulate 22.4 2.4E+02 0.0084 26.0 8.0 28 89-116 200-227 (394)
88 3g2b_A Coenzyme PQQ synthesis 21.1 1.5E+02 0.0052 22.8 5.2 33 36-68 57-89 (95)
89 2v7y_A Chaperone protein DNAK; 20.6 1.5E+02 0.005 29.4 6.2 22 94-115 160-181 (509)
90 1owf_B IHF-beta, integration H 20.4 1.6E+02 0.0056 22.1 5.2 36 38-73 4-40 (94)
No 1
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=100.00 E-value=4e-103 Score=796.02 Aligned_cols=309 Identities=39% Similarity=0.653 Sum_probs=284.2
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCcceeeecccccCCCCCccccEEEEEeCCceeEEEEEE
Q 018393 36 RAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQ 113 (356)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~l~MlPS~v~~lP~G~E~G~fLalDlGGTnlRv~~V~ 113 (356)
++.+.++++.+.|.++.++|++|+++|.+||++||++++ .|+++||||||+++|+|+|+|+|||||||||||||++|+
T Consensus 16 ~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~~~MlPTyV~~lP~G~E~G~fLAlDlGGTNfRV~~V~ 95 (470)
T 3f9m_A 16 MKKEKVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVK 95 (470)
T ss_dssp HHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESSCCCCCCEEEEEEEESSSEEEEEEEE
T ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccCccccCCCCCcceEEEEEEecCceEEEEEEE
Confidence 455667777788889999999999999999999998753 488999999999999999999999999999999999999
Q ss_pred EcCCc--ceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeeeeeeeeeeccCCceEEE
Q 018393 114 LGGRE--GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLI 191 (356)
Q Consensus 114 L~g~~--~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~q~~i~~g~Li 191 (356)
|.|++ .+..+..+++|+||+++|.+++++||||||+||++|+++++.. ++++||||||||||+|+++++|+|+
T Consensus 96 L~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~-----~~~lpLGfTFSFP~~Q~sl~~g~Li 170 (470)
T 3f9m_A 96 VGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMK-----HKKLPLGFTFSFPVRHEDIDKGILL 170 (470)
T ss_dssp EEC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCS-----SSCCEEEEEECSCEEEEETTEEEEC
T ss_pred ECCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhcccc-----ccccceEEEEeccccccCCCceEEE
Confidence 98765 3456667789999999999999999999999999999987643 3689999999999999999999999
Q ss_pred eeccceecCCCCCCcHHHHHHHHHHHcC-CCceEEEEEecchhhhhcccccCCCceEEEEecccccceeecccCCCCCcC
Q 018393 192 KWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWH 270 (356)
Q Consensus 192 ~wtKgF~~~~v~G~dv~~lL~~al~r~~-l~v~v~aivNDTVaTLla~~y~~~~~~iGlIlGTGtNacY~e~~~~I~k~~ 270 (356)
+|||||++++++|+||+++|++||+|++ ++|+|+||+|||||||||++|.+++|+||+|+|||||+||+|++++|+|++
T Consensus 171 ~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGtNa~Y~E~~~~I~k~~ 250 (470)
T 3f9m_A 171 NWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVE 250 (470)
T ss_dssp CCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSS
T ss_pred eccccccCCCcCCccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCCCceEEEEEecCCceEEeeecccccccc
Confidence 9999999999999999999999999998 799999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcEEEEecCCCcCCCC---CCCChhhHhhhccCCCCCCceeeehhcccchHHHHHHHHHHHHHccCCCCCccch
Q 018393 271 GLLPKSGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGLLTCR 347 (356)
Q Consensus 271 ~~~~~~~~miINtEwG~Fg~~~---lp~T~~D~~vD~~s~nPG~q~fEKmvSG~YLGEl~R~ill~l~~~~~lF~~~~~~ 347 (356)
+ ..++||||||||+||+++ +|+|+||+.+|++|.|||+|+||||+||||||||+|+||++|++++.||++..+
T Consensus 251 ~---~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~- 326 (470)
T 3f9m_A 251 G---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEAS- 326 (470)
T ss_dssp C---CSSEEEEECCGGGTTTTSTTGGGCCHHHHHHHHHSSSTTSCHHHHTTCHHHHHHHHHHHHHHHHHTTCSGGGCCC-
T ss_pred C---CCCcEEEeechhhcCCCcccCCCCCcccHHHhhcCCCCCceeeccccchhhHHHHHHHHHHHHHHhCcCcCCCCc-
Confidence 6 457899999999999765 579999999999999999999999999999999999999999999999998876
Q ss_pred hhcccc
Q 018393 348 LCITTH 353 (356)
Q Consensus 348 ~~~~~~ 353 (356)
..|.+|
T Consensus 327 ~~L~~~ 332 (470)
T 3f9m_A 327 EQLRTR 332 (470)
T ss_dssp TTTTST
T ss_pred HHhcCC
Confidence 455554
No 2
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-98 Score=757.33 Aligned_cols=300 Identities=42% Similarity=0.667 Sum_probs=277.8
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCCccccEEEEEeCCceeEEEEEEEcCCcc
Q 018393 40 ILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREG 119 (356)
Q Consensus 40 ~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPS~v~~lP~G~E~G~fLalDlGGTnlRv~~V~L~g~~~ 119 (356)
.++++.++|.++.++|++|+++|.+||++||++++ |+++||||||+++|+|+|+|+|||||||||||||++|+|.|.
T Consensus 5 ~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~-s~~~MlPtyv~~~P~G~E~G~~LAlDlGGTn~RV~~V~l~g~-- 81 (445)
T 3hm8_A 5 LLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEA-SSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVTTG-- 81 (445)
T ss_dssp HHHHHHGGGSCCHHHHHHHHHHHHHHHHHHHHTSC-CSSCCEECCCCSSCCSCCCEEEEEEEESSSSEEEEEEEESSS--
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCccCCCCCCCCCCCceeeEEEEEEecCCeEEEEEEEECCc--
Confidence 34556666669999999999999999999999875 789999999999999999999999999999999999999664
Q ss_pred eeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeeeeeeeeeeccCCceEEEeeccceec
Q 018393 120 RVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSI 199 (356)
Q Consensus 120 ~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~q~~i~~g~Li~wtKgF~~ 199 (356)
....+++|+||+++|.+++++||||||+||++|+++++.. ++++||||||||||+|+++++|+|++|||||++
T Consensus 82 --~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~-----~~~lplGftFSFP~~Q~sl~~g~Li~wtKGF~~ 154 (445)
T 3hm8_A 82 --VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLS-----GQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKA 154 (445)
T ss_dssp --EEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCT-----TCCCCEEEEECSCEECSSTTCCEECCCCTTCCC
T ss_pred --eEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCcc-----cccCcceEEEeeeeEeccCCceEEEEeeccccC
Confidence 3455678999999999999999999999999999987643 467999999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHc-CCCceEEEEEecchhhhhcccccCCCceEEEEecccccceeecccCCCCCcCCCCCCCCc
Q 018393 200 EDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGE 278 (356)
Q Consensus 200 ~~v~G~dv~~lL~~al~r~-~l~v~v~aivNDTVaTLla~~y~~~~~~iGlIlGTGtNacY~e~~~~I~k~~~~~~~~~~ 278 (356)
++++|+||+++|++|++|+ +++++|+||+||||||||+++|.+++|.||+|+|||||+||+|++++|+|+++ ..++
T Consensus 155 ~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~~~~iglIlGTGtNa~y~e~~~~i~k~~~---~~~~ 231 (445)
T 3hm8_A 155 SDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG---DSGR 231 (445)
T ss_dssp BTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSCC---CSSE
T ss_pred CCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCCCceEEEEEeCCceEEEEEecccccccCC---CCCc
Confidence 9999999999999999998 58999999999999999999999999999999999999999999999999875 3568
Q ss_pred EEEEecCCCcCCCCC---CCChhhHhhhccCCCCCCceeeehhcccchHHHHHHHHHHHHHccCCCCCccchhhcccc
Q 018393 279 MVINMEWGNFRSSHL---PLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGLLTCRLCITTH 353 (356)
Q Consensus 279 miINtEwG~Fg~~~l---p~T~~D~~vD~~s~nPG~q~fEKmvSG~YLGEl~R~ill~l~~~~~lF~~~~~~~~~~~~ 353 (356)
||||||||+||++++ |+|+||+.+|++|.|||+|+||||+||||||||+|+||++|++++.||++..+ ..|.+|
T Consensus 232 miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~~PG~q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~-~~L~~~ 308 (445)
T 3hm8_A 232 MCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQQI-QRLQTR 308 (445)
T ss_dssp EEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTGGGTSHHHHHHHHHHHHHHHHHHTSSGGGCCC-GGGGST
T ss_pred EEEEcchhhcCCCCCCcCCCCccchHHhcCCCCCCceEeeeecchhhHHHHHHHHHHHHHHcCCCCCCCCc-HHHcCC
Confidence 999999999998764 89999999999999999999999999999999999999999999999999877 455554
No 3
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=100.00 E-value=3e-95 Score=741.96 Aligned_cols=316 Identities=37% Similarity=0.602 Sum_probs=290.3
Q ss_pred chHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCCccccEEEEEeCCceeEEEE
Q 018393 32 GRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLR 111 (356)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPS~v~~lP~G~E~G~fLalDlGGTnlRv~~ 111 (356)
..+.++.+.+++++++|.++.++|++|+++|++||++||++++ ++++||||||+++|+|+|+|.|||||+|||||||++
T Consensus 18 ~~~~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~-~~~~MlPt~V~~lP~G~E~G~~LalDlGGTn~Rv~~ 96 (485)
T 3o8m_A 18 DVPANLMEQIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKG-GNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVL 96 (485)
T ss_dssp TSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSSSC-CSSCCEECCCCSCCCSCCEEEEEEEEESSSEEEEEE
T ss_pred cCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCcccCCCCCCCCCCCcceEEEEEEecCCeEEEEE
Confidence 4556788999999999999999999999999999999999865 689999999999999999999999999999999999
Q ss_pred EEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeeeeeeeeeeccCCceEEE
Q 018393 112 VQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLI 191 (356)
Q Consensus 112 V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~q~~i~~g~Li 191 (356)
|+|.|++. .....++|+||++++.+++++||||||+||++|+++++... .++.+++||||||||+|+++++|+|+
T Consensus 97 V~l~g~~~--~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~---~~~~l~lGftfSfP~~q~~i~~g~li 171 (485)
T 3o8m_A 97 VKLGGNHD--FDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDG---VSEPLPLGFTFSYPASQKKINSGVLQ 171 (485)
T ss_dssp EEEESSSC--EEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTC---CSSCEEEEEEECSCEECSBTTCCEEC
T ss_pred EEECCCCc--eEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHHhcccc---cccccceEEEEeeeEEEcccCCEEEe
Confidence 99988753 33345689999999999999999999999999999876432 14679999999999999999999999
Q ss_pred eeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhcccccCCCceEEEEecccccceeecccCCCCCcCC
Q 018393 192 KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG 271 (356)
Q Consensus 192 ~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~~~~~~iGlIlGTGtNacY~e~~~~I~k~~~ 271 (356)
+|||||++++++|+||+++|+++++|++++|+|+||+||||||||+++|.+++|.||+|+|||||+||+|++++|+|+++
T Consensus 172 ~wtKGF~i~~~~G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~~~~~iglIlGTG~N~~y~e~~~~i~k~~~ 251 (485)
T 3o8m_A 172 RWTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEG 251 (485)
T ss_dssp CCCTTCCCBTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCGGGTT
T ss_pred eccccccCCCcCCccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCCCCcEEEEEEecCcceEEEeeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred ----CCCCCCcEEEEecCCCcCCC--CCCCChhhHhhhccCCCCCCceeeehhcccchHHHHHHHHHHHHHccCCCCCcc
Q 018393 272 ----LLPKSGEMVINMEWGNFRSS--HLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGLLT 345 (356)
Q Consensus 272 ----~~~~~~~miINtEwG~Fg~~--~lp~T~~D~~vD~~s~nPG~q~fEKmvSG~YLGEl~R~ill~l~~~~~lF~~~~ 345 (356)
..+.+++||||||||+||+. .+|+|+||+.+|++|.|||+|+||||+||||||||+|+||++|++++.||++..
T Consensus 252 ~~~~~~~~~~~miINtEwG~F~~~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlil~~l~~~~~lF~~~~ 331 (485)
T 3o8m_A 252 LLPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQD 331 (485)
T ss_dssp TCCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHHHSSSTTSCHHHHHHSTTTHHHHHHHHHHHHHHTTSSSTTSC
T ss_pred cccccCCCCCcEEEEcccccCCCCcccCCCCchhhHHhhcCCCCCceeeccccccchHHHHHHHHHHHHHHcCcccCCCC
Confidence 23445789999999999865 389999999999999999999999999999999999999999999999999987
Q ss_pred chhhccccc
Q 018393 346 CRLCITTHL 354 (356)
Q Consensus 346 ~~~~~~~~~ 354 (356)
++ .|.+|.
T Consensus 332 ~~-~L~~~~ 339 (485)
T 3o8m_A 332 IS-KLKEAY 339 (485)
T ss_dssp CG-GGGSTT
T ss_pred cH-HhcCCC
Confidence 74 466553
No 4
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=100.00 E-value=2.2e-86 Score=672.84 Aligned_cols=303 Identities=38% Similarity=0.657 Sum_probs=280.3
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcC--CCCCcceeeecccccCCCCCccccEEEEEeCCceeEEEEE
Q 018393 35 ARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLAS--EGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112 (356)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~--~~~s~l~MlPS~v~~lP~G~E~G~fLalDlGGTnlRv~~V 112 (356)
..+.+.+++|.+.|.++.++|++|+++|.+||++||++ ++.|+++||||||+++|+|+|+|.|||||||||||||++|
T Consensus 6 ~~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V 85 (451)
T 1bdg_A 6 QQLFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLSV 85 (451)
T ss_dssp HHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcccCCCCCcccccccccCCCCCCCccceEEEEEeCCCeEEEEEE
Confidence 44667888999999999999999999999999999983 3348899999999999999999999999999999999999
Q ss_pred EEcC-CcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeeeeeeeeeeccCCceEEE
Q 018393 113 QLGG-REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLI 191 (356)
Q Consensus 113 ~L~g-~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~q~~i~~g~Li 191 (356)
++.| ++. .....++|+||.+++.+++++||||||+||++|+++++.. .+.+++|||||||++|+++++|+|+
T Consensus 86 ~l~G~~~~--~~i~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~~~lG~tfsfPv~q~~~~~G~l~ 158 (451)
T 1bdg_A 86 TLEGKGKS--PRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMK-----DKKFDLGFTFSFPCVQKGLTHATLV 158 (451)
T ss_dssp EECC-CCC--CEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEEEEECSCEEEETTTEEEEC
T ss_pred ecCCCCcc--eEEEEEEEecCCcccCCCHHHHHHHHHHHHHHHHHhcCCC-----ccccceEEEEeeEeccccCCCeEEe
Confidence 9987 542 2333468999999999999999999999999999987642 2569999999999999999999999
Q ss_pred eeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhcccccCCCceEEEEecccccceeecccCCCCCcCC
Q 018393 192 KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG 271 (356)
Q Consensus 192 ~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~~~~~~iGlIlGTGtNacY~e~~~~I~k~~~ 271 (356)
+|||||++++++|+||+++|+++++|+++||+|+||+|||||||++++|.+++|.||+|+|||+|+||+|+.+.|+|+++
T Consensus 159 ~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG~na~yve~~~~i~~~~g 238 (451)
T 1bdg_A 159 RWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDG 238 (451)
T ss_dssp CCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCGGGCS
T ss_pred ccccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccCCCcEEEEEEeCCcceEEEEcCccccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCcEEEEecCCCcCCCC---CCCChhhHhhhccCCCCCCceeeehhcccchHHHHHHHHHHHHHccCCCCCccc
Q 018393 272 LLPKSGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGLLTC 346 (356)
Q Consensus 272 ~~~~~~~miINtEwG~Fg~~~---lp~T~~D~~vD~~s~nPG~q~fEKmvSG~YLGEl~R~ill~l~~~~~lF~~~~~ 346 (356)
. +.++|+||+|||.||+++ +|+|+||..+|..|.|||+|+||||+||+|||||+|++|+++.+++.+|.+..+
T Consensus 239 ~--~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~yLgel~R~~l~~~~~~~~lf~~~~~ 314 (451)
T 1bdg_A 239 V--KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLP 314 (451)
T ss_dssp C--SSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCC
T ss_pred C--ccCcEEEecCcccCCCcccccCCCCcchhhhhhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccch
Confidence 3 456899999999998876 899999999999999999999999999999999999999999999999998655
No 5
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=2.8e-82 Score=689.31 Aligned_cols=300 Identities=42% Similarity=0.658 Sum_probs=275.6
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC--CCCcceeeecccccCCCCCccccEEEEEeCCceeEEEEEEEcC
Q 018393 39 AILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE--GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGG 116 (356)
Q Consensus 39 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~--~~s~l~MlPS~v~~lP~G~E~G~fLalDlGGTnlRv~~V~L~g 116 (356)
+.++++.++|.++.++|++|+++|++||++||+++ +.|+++||||||+++|+|+|+|.|||||||||||||++|++.+
T Consensus 468 ~~i~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~~~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l~~ 547 (917)
T 1cza_N 468 RQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRS 547 (917)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEC
T ss_pred hhHHHHHhhhcCCHHHHHHHHHHHHHHHHHHhcccCCCCCCCceECCCCCCCCCCCcceEEEEEEECCCcEEEEEEEeCC
Confidence 34567777778999999999999999999999753 3478999999999999999999999999999999999999964
Q ss_pred CcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeeeeeeeeeeccCCceEEEeeccc
Q 018393 117 REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKG 196 (356)
Q Consensus 117 ~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~q~~i~~g~Li~wtKg 196 (356)
....+.++.+++|+||.+++.+++++||||||+||.+|+++++.. .+.+||||||||||+|+++++|.|++||||
T Consensus 548 g~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~l~lG~tfsfPv~q~~i~~~~L~~WtKg 622 (917)
T 1cza_N 548 GKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTKG 622 (917)
T ss_dssp STTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCTT
T ss_pred CcceeEEeeeeEEecCcccccCCHHHHHHHHHHHHHHHHHHcCCC-----ccceeEEEEeeccccccccCccEECceecc
Confidence 333356666679999999999999999999999999999987643 256899999999999999999999999999
Q ss_pred eecCCCCCCcHHHHHHHHHHHc-CCCceEEEEEecchhhhhcccccCCCceEEEEecccccceeecccCCCCCcCCCCCC
Q 018393 197 FSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPK 275 (356)
Q Consensus 197 F~~~~v~G~dv~~lL~~al~r~-~l~v~v~aivNDTVaTLla~~y~~~~~~iGlIlGTGtNacY~e~~~~I~k~~~~~~~ 275 (356)
|++++++|+||+++|+++++|+ +++|+++||+|||||||++++|.+++|.||+|+|||||+||+|+.++|+++.+ .
T Consensus 623 f~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~iglIlGTG~na~y~e~~~~i~~~~g---~ 699 (917)
T 1cza_N 623 FKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---D 699 (917)
T ss_dssp CCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCTTSSC---C
T ss_pred cccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcEEEEEEeCCeeEEEEEcCccccCcCC---C
Confidence 9999999999999999999998 79999999999999999999999999999999999999999999999999874 3
Q ss_pred CCcEEEEecCCCcCCCC---CCCChhhHhhhccCCCCCCceeeehhcccchHHHHHHHHHHHHHccCCCCCccc
Q 018393 276 SGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGLLTC 346 (356)
Q Consensus 276 ~~~miINtEwG~Fg~~~---lp~T~~D~~vD~~s~nPG~q~fEKmvSG~YLGEl~R~ill~l~~~~~lF~~~~~ 346 (356)
.++|+||+|||+||+++ +|+|+||+.+|+.|.|||+|+||||+||+|||||+|++|+++.+++.+|.+..+
T Consensus 700 ~g~m~In~EwG~fg~~~~l~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG~yLgel~R~il~~~~~~~~lf~~~~~ 773 (917)
T 1cza_N 700 QGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQIS 773 (917)
T ss_dssp SSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTHHHHHHHHHHHHHHTTSSGGGCCC
T ss_pred cCcEEEecccccCCCcccccCCCCchhhhhhhcCCCCCCCchHHhhhHhHHHHHHHHHHHHhcccccccccccc
Confidence 56899999999999876 589999999999999999999999999999999999999999999999998766
No 6
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=100.00 E-value=4.1e-79 Score=620.35 Aligned_cols=302 Identities=21% Similarity=0.267 Sum_probs=273.6
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCCccccEEEEEeCCceeEEEEEEEcCC
Q 018393 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGR 117 (356)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPS~v~~lP~G~E~G~fLalDlGGTnlRv~~V~L~g~ 117 (356)
++.+++|.+.|.++.++|++|+++|.+||+ ||++++ |+++||||||+++|+|+|+|.|||||+||||+|+++|++.|+
T Consensus 6 ~~~~~~~~~~f~~~~~~L~~i~~~~~~em~-gL~~~~-~~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lV~~~G~ 83 (457)
T 2yhx_A 6 XSLVEVHXXVFIVPPXILQAVVSILTTRXD-DXDSSA-ASIPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLAGR 83 (457)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HHHSSS-CSSCCEECCCCCCCCSCCCEEEEEEEECSSEEEEEEEEEETT
T ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHHHhc-CCCCCC-CCCccCccccCCCCCCCccceEEEEEeCCCeEEEEEEEeCCC
Confidence 456778888888999999999999999999 998754 679999999999999999999999999999999999999876
Q ss_pred cceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeeeeeeeeeeccCCceEEEeeccce
Q 018393 118 EGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGF 197 (356)
Q Consensus 118 ~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~q~~i~~g~Li~wtKgF 197 (356)
.. .+...+++++|.+.+.+++++||||||+||.+|+++++.. ..+.+++|||||||+.|+++++|+|++|||||
T Consensus 84 ~~--~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~----~~~~~~lGi~fs~P~~q~~~~~g~l~~wtKgf 157 (457)
T 2yhx_A 84 QE--SSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSS----XAGSVPLGFTFXEAGAKEXVIKGQITXQAXAF 157 (457)
T ss_dssp EE--EEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSS----CSSCEEEEEECCSCCCCSBTTCCBCSSCCTTC
T ss_pred ee--EEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhcccc----cccccceeeEEEEEEEEeecCceEEEeeccCC
Confidence 42 3344568999999899999999999999999999976532 13568999999999999999999999999999
Q ss_pred ecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhcccccCCCceEEEEecccccceeecccCCCCCcCCCC-C-C
Q 018393 198 SIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL-P-K 275 (356)
Q Consensus 198 ~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~~~~~~iGlIlGTGtNacY~e~~~~I~k~~~~~-~-~ 275 (356)
++++++ |++++|+++++|+++|++|++|+|||+||+++.+|.++++.||+|+|||+|+||+|+.++|+|+++.. + .
T Consensus 158 ~i~~~~--~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~~ 235 (457)
T 2yhx_A 158 SLAXLX--KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGG 235 (457)
T ss_dssp CCSSCS--SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSCS
T ss_pred CcchhH--HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcCCccEEEEEECcEEEEEEEECCCccccccccccccc
Confidence 999988 99999999999999999999999999999999999999999999999999999999999999996531 2 3
Q ss_pred CCcEEEEecCCCcCCCC--CCCChhhHhhhccCCCCCCceeeehhcccchHHHHHHHHHHHHHccCCCCCccchhhccc
Q 018393 276 SGEMVINMEWGNFRSSH--LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGLLTCRLCITT 352 (356)
Q Consensus 276 ~~~miINtEwG~Fg~~~--lp~T~~D~~vD~~s~nPG~q~fEKmvSG~YLGEl~R~ill~l~~~~~lF~~~~~~~~~~~ 352 (356)
.+.|+||||||.|++++ +|+|+||+.+|..|.||| |+||||+||+|||||+|++|++|.+++.||.+ .+ ..|.+
T Consensus 236 ~g~~~in~EwG~f~~~~~~lp~t~~D~~lD~~s~~pG-q~fEkm~SG~yLGel~R~il~~~~~~~~lf~~-~~-~~l~~ 311 (457)
T 2yhx_A 236 AGXMXICCDQSSFRKAFPSLPQIXYLXTLNXXSPXAX-KTFXKNSXAKNXGQSLRDVLMXFKXXGQXHXX-XA-XSFXA 311 (457)
T ss_dssp SCCEEEECCCTTTTTTCSSSCCCHHHHHHHHHSSCSC-CHHHHHHCGGGHHHHHHHHHHHHHHTTSSSSS-CC-CSCCS
T ss_pred CCceEEEEEcccCCCCCCcCCccccccccccccCchH-HHHHHHhhhcCcHHHHHHHHHHHhcccccccc-cc-hhccc
Confidence 67899999999998654 899999999999999999 99999999999999999999999999999997 44 44444
No 7
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=7.6e-69 Score=583.90 Aligned_cols=302 Identities=39% Similarity=0.634 Sum_probs=274.6
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCcceeeecccccCCCCCccccEEEEEeCCceeEEEEEE
Q 018393 36 RAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQ 113 (356)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~l~MlPS~v~~lP~G~E~G~fLalDlGGTnlRv~~V~ 113 (356)
++.+.+++|.+.|.++.++|++|+++|.+||++||+++. .|+++||||||+++|+|+|+|.|||||+||||+|+++|+
T Consensus 17 ~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lv~ 96 (917)
T 1cza_N 17 DQVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQ 96 (917)
T ss_dssp HHHHHHHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCCCCCCcccccccccCCCCCCCCcceEEEEEeCCCeEEEEEEE
Confidence 445567888899999999999999999999999998653 478999999999999999999999999999999999999
Q ss_pred EcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeeeeeeeeeeccCCceEEEee
Q 018393 114 LGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKW 193 (356)
Q Consensus 114 L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~q~~i~~g~Li~w 193 (356)
+.|++....+...+++++|.+++.+++++||||||+||.+|+++++.. .+.+++|||||||++|+++++|+|++|
T Consensus 97 ~~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~-----~~~~~lGi~fs~P~~q~~~~~G~l~~w 171 (917)
T 1cza_N 97 VNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAILITW 171 (917)
T ss_dssp EEEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEECCC
T ss_pred ecCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccEEEEEccccccCcCCceEEEec
Confidence 987544434345568999998888899999999999999999887532 245799999999999999999999999
Q ss_pred ccceecCCCCCCcHHHHHHHHHHHcC-CCceEEEEEecchhhhhcccccCCCceEEEEecccccceeecccCCCCCcCCC
Q 018393 194 TKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGL 272 (356)
Q Consensus 194 tKgF~~~~v~G~dv~~lL~~al~r~~-l~v~v~aivNDTVaTLla~~y~~~~~~iGlIlGTGtNacY~e~~~~I~k~~~~ 272 (356)
||||++++++|+|++++|+++++|++ +++++++|+|||+||+++.+|.++++.||+|+|||+|+||+++..+|+++.+.
T Consensus 172 tkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~~~iglilGTGvngg~i~~g~~i~~~~G~ 251 (917)
T 1cza_N 172 TKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGD 251 (917)
T ss_dssp CTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCTTSSCC
T ss_pred ccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCCcEEEEEEECCcceEEEecCcccccccCC
Confidence 99999999999999999999999997 89999999999999999999999999999999999999999999999998762
Q ss_pred CCCCCcEEEEecCCCcCCCC---CCCChhhHhhhccCCCCCCceeeehhcccchHHHHHHHHHHHHHccCCCCCcc
Q 018393 273 LPKSGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGLLT 345 (356)
Q Consensus 273 ~~~~~~miINtEwG~Fg~~~---lp~T~~D~~vD~~s~nPG~q~fEKmvSG~YLGEl~R~ill~l~~~~~lF~~~~ 345 (356)
.++|+||+|||.|++++ +|+|+||..+|..+.|||+|+||||+||+||||++|+++.++.+++.+|.+..
T Consensus 252 ---~g~~~in~E~G~f~~~~~l~~~~t~~D~~~dc~~g~pg~g~~Ek~~SG~yLgel~r~~l~~~~~~~~~~~~~~ 324 (917)
T 1cza_N 252 ---EGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRI 324 (917)
T ss_dssp ---SSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCC
T ss_pred ---CCceEEeccccccCCccccccCCCccccccccCCcCCCccHhHHHhhhhhHHHHHHHHHHHhhcccccccccc
Confidence 45799999999998765 36999999999999999999999999999999999999999999998887643
No 8
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.87 E-value=3.3e-08 Score=93.91 Aligned_cols=143 Identities=18% Similarity=0.226 Sum_probs=98.3
Q ss_pred ccEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeee
Q 018393 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (356)
Q Consensus 95 G~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGf 174 (356)
+.+|+||+|||++|++++++.|+ +.... .++.|.. .+.+++++.+++.|.+++++.+... .+..-+|+
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~~igi 73 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGV---VQQKW--SIETNIL---EDGKHIVPSIIESIRHRIDLYNMKK----EDFVGIGM 73 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCCT---TTTTTHHHHHHHHHHHHHHHTTCCG----GGEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEEE--EEcCCCC---CCHHHHHHHHHHHHHHHHHHcCCCc----cceeEEEE
Confidence 46899999999999999998653 33322 3444432 3568899999999999998765321 12334555
Q ss_pred eeeeeeeeccCCceEEEeeccceecCCCCCC-cHHHHHHHHHHHcCCCceEEEEEecchhhhhcccc----cCCCceEEE
Q 018393 175 TFSFPVRQTSIASGDLIKWTKGFSIEDTVGE-DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAV 249 (356)
Q Consensus 175 TFSFP~~q~~i~~g~Li~wtKgF~~~~v~G~-dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y----~~~~~~iGl 249 (356)
...=|++. .+|+++. +..+. ..+. ++.+.|++.+ ++| +.|.||+.+..++-.+ .+.+..+.+
T Consensus 74 ~~pG~vd~---~~g~v~~-~~~l~---w~~~~~l~~~l~~~~---~~p---v~v~ND~~aaa~~e~~~g~~~~~~~~~~l 140 (326)
T 2qm1_A 74 GTPGSVDI---EKGTVVG-AYNLN---WTTVQPVKEQIESAL---GIP---FALDNDANVAALGERWKGAGENNPDVIFI 140 (326)
T ss_dssp EESSEEET---TTTEEEC-BGGGT---BCSCBCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEE
T ss_pred ecccceeC---CCCEEEe-cCCCC---ccCCchHHHHHHHHh---CCC---EEEecHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 55555554 3465542 22232 2345 8888887766 454 5789999999887654 345788999
Q ss_pred Eecccccceeecc
Q 018393 250 ILGTGTNAAYVER 262 (356)
Q Consensus 250 IlGTGtNacY~e~ 262 (356)
++|||..++++.+
T Consensus 141 ~~GtGiG~giv~~ 153 (326)
T 2qm1_A 141 TLGTGVGGGIVAA 153 (326)
T ss_dssp EESSSEEEEEEET
T ss_pred EECCceEEEEEEC
Confidence 9999999999875
No 9
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.83 E-value=1.3e-07 Score=94.04 Aligned_cols=185 Identities=16% Similarity=0.188 Sum_probs=123.2
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCC----C---cceeeecccccCCCCCccccEEEEEeCCceeEEEEEEEc
Q 018393 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG----S---KLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLG 115 (356)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~----s---~l~MlPS~v~~lP~G~E~G~fLalDlGGTnlRv~~V~L~ 115 (356)
++.+.+.++...+.++.+++.+ +||-.+.. | .-+.+.++. | +.+.+|++|+|||++|++++++.
T Consensus 58 ela~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~s~~GR~~~~l~~~---~---~~~~~lGIDiGgt~i~~~l~d~~ 128 (429)
T 1z05_A 58 DLSKESELAPASITKITRELID---AHLIHETTVQEAISRGRPAVGLQTN---N---LGWQFLSMRLGRGYLTIALHELG 128 (429)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---TTSEEEECHHHHHHHTSCCEEEEEC---C---TTEEEEEEEEETTEEEEEEEETT
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCCEEeccccCCCCCCCCCeEEEEC---C---CCCEEEEEEECCCEEEEEEECCC
Confidence 5566666888888888887766 56522110 0 012222222 2 35679999999999999999986
Q ss_pred CCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeeeeeeeeeeccCCceEEEeecc
Q 018393 116 GREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 195 (356)
Q Consensus 116 g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~q~~i~~g~Li~wtK 195 (356)
|+ +.... .++.|. .+.+++++.+++.|.+++++.+.. ..+..-+|+.+.-|++. ++|++. +..
T Consensus 129 G~---il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~-~~~ 191 (429)
T 1z05_A 129 GE---VLIDT--KIDIHE----IDQDDVLARLLFEIEEFFQTYAAQ----LDRVTSIAITLPGLVNS---EQGIVL-QMP 191 (429)
T ss_dssp SC---EEEEE--EEECCC----CBHHHHHHHHHHHHHHHHHHTTTT----CCEEEEEEEEESSEEET---TTTEEE-ECS
T ss_pred CC---EEEEE--EEcCCC----CCHHHHHHHHHHHHHHHHHhcCCC----cCceEEEEEeccCcEeC---CCCeEe-ecC
Confidence 63 33322 344443 247899999999999999876432 12344566666666665 346554 333
Q ss_pred ceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhccccc----CCCceEEEEecccccceeecc
Q 018393 196 GFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVER 262 (356)
Q Consensus 196 gF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~----~~~~~iGlIlGTGtNacY~e~ 262 (356)
.+. ..+.++.+.|++.+ ++| +.|.||..+..++-.+. +.+..+.+++|||..++++.+
T Consensus 192 ~l~---w~~~~l~~~L~~~~---~~p---V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~ 253 (429)
T 1z05_A 192 HYN---VKNLALGPEIYKAT---GLP---VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLD 253 (429)
T ss_dssp SSB---CSSBCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEET
T ss_pred CCC---CCCCCHHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEEC
Confidence 332 23568888888765 555 57899999988876543 457889999999999999875
No 10
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=98.82 E-value=1.8e-07 Score=92.10 Aligned_cols=189 Identities=12% Similarity=0.116 Sum_probs=123.9
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCC----CcceeeecccccCCCCCccccEEEEEeCCceeEEEEEEEcCCc
Q 018393 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG----SKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGRE 118 (356)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~----s~l~MlPS~v~~lP~G~E~G~fLalDlGGTnlRv~~V~L~g~~ 118 (356)
++.+...++...+.++.+++.+ +||=.+.. ++----|..+.--| +.+.+|++|+|||++|++++++.|+
T Consensus 35 ~la~~~~ls~~tv~~~v~~L~~---~g~i~~~~~~~~~~~GR~~~~l~~~~---~~~~~lgiDiG~t~i~~~l~d~~G~- 107 (406)
T 1z6r_A 35 DLSRLAQLAPASITKIVHEMLE---AHLVQELEIKEAGNRGRPAVGLVVET---EAWHYLSLRISRGEIFLALRDLSSK- 107 (406)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH---HTSEEEC-------------CEEECC---TTCEEEEEEEETTEEEEEEEETTCC-
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCcEEeecccCCCCCCCCCeEEEEcC---CccEEEEEEEcCCEEEEEEEcCCCC-
Confidence 6667777888888888888766 56632110 11111222222112 3567999999999999999998663
Q ss_pred ceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeeeeeeeeeeccCCceEEEeecccee
Q 018393 119 GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFS 198 (356)
Q Consensus 119 ~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~q~~i~~g~Li~wtKgF~ 198 (356)
+.... .++.|. .+.+++++.+++.|.+++++.+.. ..+..-+|+.+.-|++. ++|.+. +...+
T Consensus 108 --il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~-~~~~l- 170 (406)
T 1z6r_A 108 --LVVEE--SQELAL----KDDLPLLDRIISHIDQFFIRHQKK----LERLTSIAITLPGIIDT---ENGIVH-RMPFY- 170 (406)
T ss_dssp --EEEEE--EEECCS----SCSSCHHHHHHHHHHHHHHHTGGG----CCCEEEEEEEESSEEET---TTTEEE-ECTTC-
T ss_pred --EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcCCC----cCceeEEEEEeecCEeC---CCCEEe-cCCCC-
Confidence 33322 333332 356889999999999999875421 12345566666666765 356666 33322
Q ss_pred cCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhccccc----CCCceEEEEecccccceeecc
Q 018393 199 IEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVER 262 (356)
Q Consensus 199 ~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~----~~~~~iGlIlGTGtNacY~e~ 262 (356)
++..+.++.+.|++.+ ++| +.|.||..+..++-.+. +.+..+.+.+|||..++++.+
T Consensus 171 -~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~ 231 (406)
T 1z6r_A 171 -EDVKEMPLGEALEQHT---GVP---VYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITD 231 (406)
T ss_dssp -TTCSSBCHHHHHHHHH---SSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEET
T ss_pred -CCccCCCHHHHHHHHH---CCC---EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEEC
Confidence 2334578888888766 455 57899999998876543 457789999999999999865
No 11
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.72 E-value=4.2e-07 Score=89.03 Aligned_cols=210 Identities=13% Similarity=0.151 Sum_probs=127.1
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC---CCCcceeeecccccCCCCCccccEEEEEeCCceeEEEEEEEcCCcc
Q 018393 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASE---GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREG 119 (356)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~---~~s~l~MlPS~v~~lP~G~E~G~fLalDlGGTnlRv~~V~L~g~~~ 119 (356)
++.+...++...+.++.+++.+ +||=.+ ..|+-=--|..+.-- .+.+.+|++|+|||++|++++++.|+
T Consensus 38 ~la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~~~GR~~~~l~~~---~~~~~~lGIDiGgt~i~~~l~d~~G~-- 109 (380)
T 2hoe_A 38 ELAEELGLTKTTVGEIAKIFLE---KGIVVEEKDSPKGVGRPTKSLKIS---PNCAYVLGIEVTRDEIAACLIDASMN-- 109 (380)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---HTSEEEEECCC----CCCEEEEEC---GGGCEEEEEEECSSEEEEEEEETTCC--
T ss_pred HHHHHHCcCHHHHHHHHHHHHH---CCCEEeecCCCCCCCCCceEEEEc---cCCCeEEEEEECCCEEEEEEECCCCC--
Confidence 5556666888888888887765 566221 111100111111110 23567999999999999999998663
Q ss_pred eeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeeeeeeeeeeccCCceEEEeeccceec
Q 018393 120 RVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSI 199 (356)
Q Consensus 120 ~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~q~~i~~g~Li~wtKgF~~ 199 (356)
+.... .++.|.. .+.+++++.+++.|.+++++.+... .+..-+|+...=|++. .+|++. +...+
T Consensus 110 -vl~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~gigi~~pG~vd~---~~g~v~-~~~~l-- 173 (380)
T 2hoe_A 110 -ILAHE--AHPLPSQ---SDREETLNVMYRIIDRAKDMMEKLG----SKLSALTVAAPGPIDT---ERGIII-DPRNF-- 173 (380)
T ss_dssp -EEEEE--EEECCSS---CCHHHHHHHHHHHHHHHHHHHHHTT----CCCCEEEEEESSCEET---TTTEEC-CCSSC--
T ss_pred -EEEEE--EEccCCC---CCHHHHHHHHHHHHHHHHHhcCCCc----CcEEEEEEEeeccEEC---CCCEEe-ccCCC--
Confidence 33322 3444432 2578999999999999998754211 1233455555555554 245544 22223
Q ss_pred CCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhcccccCC--CceEEEEecccccceeecccCCCCCcCCCCCCCC
Q 018393 200 EDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK--DAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSG 277 (356)
Q Consensus 200 ~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~~~--~~~iGlIlGTGtNacY~e~~~~I~k~~~~~~~~~ 277 (356)
+..+.++.+.|++.+ ++ ++.|.||+.+..++-.+... +..+.+++|||..++++.+-.-+.-..+...+-+
T Consensus 174 -~w~~~~l~~~l~~~~---~~---pV~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~aGEiG 246 (380)
T 2hoe_A 174 -PLSQIPLANLLKEKY---GI---EVWVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIIDGELYRGENGYAGEIG 246 (380)
T ss_dssp -TTBTSCHHHHHHHHH---CS---EEEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEETTEECCCSSSCCCCGG
T ss_pred -CCcCCChHHHHHHHh---CC---CEEEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEECCEEeccCCCcccccc
Confidence 233578888888776 44 36899999999888655332 7789999999999999876322221111112235
Q ss_pred cEEEEe
Q 018393 278 EMVINM 283 (356)
Q Consensus 278 ~miINt 283 (356)
+|.++-
T Consensus 247 h~~v~~ 252 (380)
T 2hoe_A 247 YTRVFN 252 (380)
T ss_dssp GCEEEC
T ss_pred ceEecC
Confidence 666653
No 12
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=98.49 E-value=1.5e-06 Score=82.97 Aligned_cols=138 Identities=19% Similarity=0.290 Sum_probs=93.9
Q ss_pred ccEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeee
Q 018393 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (356)
Q Consensus 95 G~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGf 174 (356)
+.+|++|+|||++|++++++.|+ +... ..++.|.. +.+++++.|.+.|.++....+ ...-+|+
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~---il~~--~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~--------~i~~igi 86 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRR---LQWE--KRVPTPHT----SYSAFLDAVCELVEEADQRFG--------VKGSVGI 86 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEE--EEEECCCS----CHHHHHHHHHHHHHHHHHHHT--------SCCEEEE
T ss_pred ceEEEEEECCCEEEEEEEeCCCC---EEEE--EEecCCCC----CHHHHHHHHHHHHHHHHHhcC--------CccEEEE
Confidence 45899999999999999998663 3322 23444432 467889999998888876542 1123555
Q ss_pred eeeeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhccccc----CCCceEEEE
Q 018393 175 TFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVI 250 (356)
Q Consensus 175 TFSFP~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~----~~~~~iGlI 250 (356)
...=|++. .+|+++ ++ ..+...+.++.+.|++.+ ++| +.|.||..+..++-.+. ..+..+.++
T Consensus 87 ~~pG~vd~---~~g~v~-~~---~~~~~~~~~l~~~l~~~~---~~p---v~v~NDa~aaalgE~~~g~~~~~~~~v~l~ 153 (327)
T 2ap1_A 87 GIPGMPET---EDGTLY-AA---NVPAASGKPLRADLSARL---DRD---VRLDNDANCFALSEAWDDEFTQYPLVMGLI 153 (327)
T ss_dssp EESSBSCC---TTSCCB-CT---TCTTTTTSCHHHHHHHHH---TSC---EEEEEHHHHHHHHHHTSTTGGGCSEEEEEE
T ss_pred EeeeeEEC---CCCEEE-cc---CCCccCCCChHHHHHHHH---CCC---EEEecHHHHHHHHHHHhCcCCCCCcEEEEE
Confidence 55555554 234443 22 223345678888888765 444 68999999988876543 456789999
Q ss_pred ecccccceeecc
Q 018393 251 LGTGTNAAYVER 262 (356)
Q Consensus 251 lGTGtNacY~e~ 262 (356)
+|||..++++.+
T Consensus 154 ~GtGiG~giv~~ 165 (327)
T 2ap1_A 154 LGTGVGGGLVLN 165 (327)
T ss_dssp ESSSEEEEEEET
T ss_pred ECCcEEEEEEEC
Confidence 999999998865
No 13
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.43 E-value=2.3e-06 Score=81.87 Aligned_cols=145 Identities=17% Similarity=0.200 Sum_probs=90.1
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeee
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfT 175 (356)
.+|+||+|||++|++++++.|+ +.... ... |......+.+++++.|++.|.+++++.+... . .-..|+.
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~---i~~~~--~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~----~-~~i~gig 75 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK---ILAEA--DGL-STNHWLIGTDKCVERINEMVNRAKRKAGVDP----L-VPLRSLG 75 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC---EEEEE--EEC-CCCHHHHCHHHHHHHHHHHHHHHHHHHTCCT----T-CCBSEEE
T ss_pred EEEEEEcCccceEEEEEeCCCC---EEEEE--eCC-CCCcccCCHHHHHHHHHHHHHHHHHhcCCCc----c-cceeEEE
Confidence 5899999999999999998653 33222 121 1111112568899999999999998764321 1 0123333
Q ss_pred eeeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHc-CCCceEEEEEecchhhhhcccccCCCceEEEEeccc
Q 018393 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 254 (356)
Q Consensus 176 FSFP~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~-~l~v~v~aivNDTVaTLla~~y~~~~~~iGlIlGTG 254 (356)
++.| +.+..+-...|.+.|+++ +.....+.|.||+.+..++ .+ .+..+.+++|||
T Consensus 76 i~~p---------------------G~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a-~~--~~~~v~v~~GTG 131 (347)
T 2ch5_A 76 LSLS---------------------GGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIAT-AT--PDGGVVLISGTG 131 (347)
T ss_dssp EEET---------------------TTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH-HC--SSCEEEEEESSS
T ss_pred Eecc---------------------CCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHh-hC--CCCcEEEEEcCC
Confidence 3333 222111123455566554 2101246889999999998 44 356789999999
Q ss_pred ccceeecccCCCCCcCCCCCCCCcEEEEecCCCc
Q 018393 255 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF 288 (356)
Q Consensus 255 tNacY~e~~~~I~k~~~~~~~~~~miINtEwG~F 288 (356)
.+++.+.+ +++.+-.-+||.+
T Consensus 132 ig~~~v~~-------------~G~~c~cG~~G~l 152 (347)
T 2ch5_A 132 SNCRLINP-------------DGSESGCGGWGHM 152 (347)
T ss_dssp EEEEEECT-------------TSCEEEEECCCTT
T ss_pred ceeEEEcC-------------CCCEEecCCcCcc
Confidence 99987653 2345555677776
No 14
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=98.32 E-value=4.9e-06 Score=79.86 Aligned_cols=137 Identities=18% Similarity=0.294 Sum_probs=94.1
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeee
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfT 175 (356)
.+|++|+|||++|++++++.|+ +... ..++.|.. +.+++++.|++.|.+++...+. ..-+|+.
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~---il~~--~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~--------~~gigi~ 87 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLE---RVAT--ERVPTPTD----DYPLLLETIAGLVAKYDQEFAC--------EGKIGLG 87 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEE--EEEECCTT----CHHHHHHHHHHHHHHHHHHHTS--------CCEEEEE
T ss_pred EEEEEEECCCEEEEEEEeCCCc---EEEE--EEecCCCC----CHHHHHHHHHHHHHHHHHhcCC--------ccEEEEE
Confidence 5899999999999999988663 3332 23455532 5788999999999888765431 1234444
Q ss_pred eeeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhccccc----CCCceEEEEe
Q 018393 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVIL 251 (356)
Q Consensus 176 FSFP~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~----~~~~~iGlIl 251 (356)
..=|++. .+|++. .+ . .....+.++.+.|++.+ ++| +.|.||..+..++-.+. +.+..+.+.+
T Consensus 88 ~pG~vd~---~~g~v~-~~-~--~~~~~~~~l~~~l~~~~---~~p---V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~ 154 (327)
T 4db3_A 88 LPGMEDA---DDATVL-TV-N--VPAAKGKPLRADLEAKI---GRS---VKIENDANCFALSEAWDEELQDAPSVMGLIL 154 (327)
T ss_dssp ESEEECT---TTCCEE-ES-S--SGGGTTSCHHHHHHHHH---SSC---CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEE
T ss_pred eeccEeC---CCCEEE-cC-C--CccccCCCHHHHHHHHH---CCC---EEEecchhHHHHHHHHhCCCCCCCcEEEEEe
Confidence 4444543 345543 22 1 22234578888888766 555 57899999988877653 4567899999
Q ss_pred cccccceeecc
Q 018393 252 GTGTNAAYVER 262 (356)
Q Consensus 252 GTGtNacY~e~ 262 (356)
|||.-++++.+
T Consensus 155 GtGiG~gii~~ 165 (327)
T 4db3_A 155 GTGFGGGLIYE 165 (327)
T ss_dssp SSSEEEEEEET
T ss_pred CccceEEEEEC
Confidence 99999999875
No 15
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=98.25 E-value=7.1e-06 Score=78.36 Aligned_cols=144 Identities=15% Similarity=0.216 Sum_probs=93.2
Q ss_pred CccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCccee
Q 018393 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (356)
Q Consensus 92 ~E~G~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~ 171 (356)
...+.+|++|+|||++|++++++.|+ +.... .++.|.. .+.+++++.|++.|.++++. .. +..-
T Consensus 16 ~~~~~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~-~~-------~i~g 79 (321)
T 3r8e_A 16 YFQGMILGIDVGGTSVKFGLVTPEGE---IQNAT--RFMTADW---VNGIGFVESMKLEIGNFLKQ-YP-------IVKG 79 (321)
T ss_dssp ---CCEEEEECCSSEEEEEEECTTCC---EEEEE--EEEHHHH---HTTTCHHHHHHHHHHHHHHH-CT-------TCCE
T ss_pred ccCcEEEEEEECCCEEEEEEEcCCCc---EEEEE--EEeCCCC---CCHHHHHHHHHHHHHHHHhc-cC-------CeeE
Confidence 34667999999999999999988653 33322 3343321 25678999999999999862 11 2233
Q ss_pred eeeeeeeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhcccc----cCCCceE
Q 018393 172 LGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIA 247 (356)
Q Consensus 172 lGfTFSFP~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y----~~~~~~i 247 (356)
+|+...=|++. .+|++..-. .+ ++..+.++.+.|++.+. ++ .+.|.||..+..++-.+ .+.+..+
T Consensus 80 igi~~pG~vd~---~~g~v~~~~-~l--~~w~~~~l~~~l~~~~~--~~---pV~v~NDa~aaalaE~~~g~~~~~~~~v 148 (321)
T 3r8e_A 80 VGIGWPGLVSL---DRTKVILLP-NI--PSVVNVPIVEILRSEFP--HI---HFKIENDAKCAALGEYYFGENKRMQTFI 148 (321)
T ss_dssp EEEEESSEECT---TSCCEEEBT-TB--CCCCSCCHHHHHHHHCT--TS---EEEEEEHHHHHHHHHHHHSTTTTCSSEE
T ss_pred EEEEecccEEC---CCCEEEeCC-CC--ccccCCCHHHHHHHHcC--CC---CEEEEchHHHHHHHHHHhCCCCCCCcEE
Confidence 44444444542 356555322 11 22335677777766542 33 36899999988777654 3457789
Q ss_pred EEEecccccceeecc
Q 018393 248 AVILGTGTNAAYVER 262 (356)
Q Consensus 248 GlIlGTGtNacY~e~ 262 (356)
-+.+|||.-++++.+
T Consensus 149 ~l~~GtGiG~gii~~ 163 (321)
T 3r8e_A 149 LLALGTGVGSGVMMN 163 (321)
T ss_dssp EEEESSSEEEEEEET
T ss_pred EEEECCceEEEEEEC
Confidence 999999999999875
No 16
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=98.25 E-value=1.4e-05 Score=76.71 Aligned_cols=142 Identities=25% Similarity=0.275 Sum_probs=94.6
Q ss_pred cccEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeee
Q 018393 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (356)
Q Consensus 94 ~G~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lG 173 (356)
.+.+|++|+|||++|++++++.|+ +.... .++.|. +.+++++.+.+.|.+++++.... ..-.+|
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~-----~~~~~~~~i~~~i~~~~~~~~~~------~~~i~g 92 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMKGE---IVKKY--TQFNPK-----TYEERINLILQMCVEAAAEAVKL------NCRILG 92 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEECCS-----SHHHHHHHHHHHHHHHHHHHHHT------TEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECCCCc---EEEEE--EEcCCC-----CHHHHHHHHHHHHHHHHHhcccc------cCceEE
Confidence 457899999999999999998663 33222 233342 46788999999999988764321 112345
Q ss_pred eeeeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhccccc----CCCceE
Q 018393 174 FTFSFP--VRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIA 247 (356)
Q Consensus 174 fTFSFP--~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~----~~~~~i 247 (356)
+.+|.| ++. ++|+++.-+. + .++..+.++.+.|++.+ ++| +.|.||..+..++-.+. ..+..+
T Consensus 93 igi~~pG~vd~---~~g~v~~~~~-~-~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~v 161 (343)
T 2yhw_A 93 VGISTGGRVNP---REGIVLHSTK-L-IQEWNSVDLRTPLSDTL---HLP---VWVDNDGNCAALAERKFGQGKGLENFV 161 (343)
T ss_dssp EEEEESSEEET---TTTEEEECCT-T-SSSCSSEECHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSTTTTCSCEE
T ss_pred EEEecccCEeC---CCCEEEeCCc-C-CCCCcCCCHHHHHHHHH---CCC---EEEechhHHHHHHHHHhCCCCCCCcEE
Confidence 555555 443 3465552111 1 01223567777877765 454 57899999988876543 446789
Q ss_pred EEEecccccceeecc
Q 018393 248 AVILGTGTNAAYVER 262 (356)
Q Consensus 248 GlIlGTGtNacY~e~ 262 (356)
-+++|||..++++.+
T Consensus 162 ~i~~GtGiG~gii~~ 176 (343)
T 2yhw_A 162 TLITGTGIGGGIIHQ 176 (343)
T ss_dssp EEEESSSEEEEEEET
T ss_pred EEEECCCEEEEEEEC
Confidence 999999999999865
No 17
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.20 E-value=7.5e-06 Score=78.21 Aligned_cols=133 Identities=21% Similarity=0.287 Sum_probs=89.9
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeee
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfT 175 (356)
.+|++|+|||++|++++++.|+ +.... .++.| .+.+++++.|++.|.+++++. + ..|+.
T Consensus 3 ~~lgiDiGgt~i~~~l~d~~G~---i~~~~--~~~~~-----~~~~~~~~~i~~~i~~~~~~~---------~--i~gig 61 (321)
T 3vgl_A 3 LTIGVDIGGTKIAAGVVDEEGR---ILSTF--KVATP-----PTAEGIVDAICAAVAGASEGH---------D--VEAVG 61 (321)
T ss_dssp EEEEEEECSSEEEEEEECTTCC---BCCCE--EEECC-----SSHHHHHHHHHHHHHHHHTTC---------C--EEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCC---EEEEE--EeeCC-----CCHHHHHHHHHHHHHHHHhhc---------C--ceEEE
Confidence 5899999999999999988664 22211 23333 247899999999999986532 1 34555
Q ss_pred eeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhcccc----cCCCceEEE
Q 018393 176 FSFP--VRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAV 249 (356)
Q Consensus 176 FSFP--~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y----~~~~~~iGl 249 (356)
++.| ++. ++|.+.. +-.+ +..+.++.+.|++.+ ++| +.|.||..+..++-.+ ...+..+.+
T Consensus 62 i~~pG~vd~---~~g~v~~-~~~l---~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l 128 (321)
T 3vgl_A 62 IGAAGYVDD---KRATVLF-APNI---DWRHEPLKDKVEQRV---GLP---VVVENDANAAAWGEYRFGAGQGHDDVICI 128 (321)
T ss_dssp EEESSEECT---TSSCEEE-CSSS---CCEEECHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEE
T ss_pred EeccccEeC---CCCEEEe-CCCC---CCcCCCHHHHHhhhh---CCC---EEEEehhhhHHHHHHHhCCCCCCCCEEEE
Confidence 5555 443 2344432 1111 223467777777766 554 6789999998887544 345778999
Q ss_pred Eecccccceeecc
Q 018393 250 ILGTGTNAAYVER 262 (356)
Q Consensus 250 IlGTGtNacY~e~ 262 (356)
.+|||.-++++.+
T Consensus 129 ~~GtGiG~gii~~ 141 (321)
T 3vgl_A 129 TLGTGLGGGIIIG 141 (321)
T ss_dssp EESSSEEEEEEET
T ss_pred EeCcceEEEEEEC
Confidence 9999999999876
No 18
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=98.17 E-value=5.4e-05 Score=70.27 Aligned_cols=147 Identities=18% Similarity=0.260 Sum_probs=94.0
Q ss_pred CccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCccee
Q 018393 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (356)
Q Consensus 92 ~E~G~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~ 171 (356)
.+...++++|+|||++|++++++.+. .+.. ....++.|.. .+.+++++.|++.+.+++++.... ....-
T Consensus 9 ~~~~~~lgidiggt~i~~~l~dl~~g--~i~~-~~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~~~-----~~~~~ 77 (267)
T 1woq_A 9 HKNAPLIGIDIGGTGIKGGIVDLKKG--KLLG-ERFRVPTPQP---ATPESVAEAVALVVAELSARPEAP-----AAGSP 77 (267)
T ss_dssp --CCCEEEEEECSSEEEEEEEETTTT--EEEE-EEEEEECCSS---CCHHHHHHHHHHHHHHHHTSTTCC-----CTTCC
T ss_pred CCCCEEEEEEECCCEEEEEEEECCCC--eEEE-EEEecCCCcc---CCHHHHHHHHHHHHHHHHHhcccc-----Cccce
Confidence 34456899999999999999998532 2221 1123444421 246889999999999987643211 11123
Q ss_pred eeeeeeeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhccccc----CCC-ce
Q 018393 172 LGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKD-AI 246 (356)
Q Consensus 172 lGfTFSFP~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~----~~~-~~ 246 (356)
+|+...=|++ +|+++ ++-.+. ++..+.++.+.|++.+ ++| +.+.||.-+..++-.+. +.+ ..
T Consensus 78 igi~~pG~v~-----~g~v~-~~~~l~-~~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~g~~~~~~~~~ 144 (267)
T 1woq_A 78 VGVTFPGIIQ-----HGVVH-SAANVD-KSWLNTDIDALLTARL---GRP---VEVINDADAAGLAEARYGAGAGVKGTV 144 (267)
T ss_dssp EEEEESSCEE-----TTEEC-CCTTSC-GGGTTCBHHHHHHHHH---TSC---EEEEEHHHHHHHHHHHHSTTTTCCSEE
T ss_pred EEEEccceEc-----CCEEE-eCCCCC-CCCCCCCHHHHHHHHH---CCC---EEEeehhHHHHHHHHHhCCCCCCCCcE
Confidence 5666555665 45543 332220 0223578888888776 444 68999999988886542 233 46
Q ss_pred EEEEecccccceeecc
Q 018393 247 AAVILGTGTNAAYVER 262 (356)
Q Consensus 247 iGlIlGTGtNacY~e~ 262 (356)
+.+.+|||.-++.+.+
T Consensus 145 ~~l~~GtGIG~giv~~ 160 (267)
T 1woq_A 145 LVITLGTGIGSAFIFD 160 (267)
T ss_dssp EEEEESSSEEEEEEET
T ss_pred EEEEECcceEEEEEEC
Confidence 7899999999999865
No 19
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=98.14 E-value=3.4e-06 Score=79.52 Aligned_cols=122 Identities=20% Similarity=0.168 Sum_probs=63.0
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeeee
Q 018393 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (356)
Q Consensus 97 fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfTF 176 (356)
||+||+|||+.|+++++ .|+ +.... ..+ |.+....+.+++++.|++.|.+.+... . ..++.+
T Consensus 2 ~lgiDiGGT~i~~~l~d-~g~---il~~~--~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~---------~--i~~igi 63 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-NGA---VIKRL--GTK-GINPFFQSEEEIQQKLTASLLPQLPEG---------K--FNAVYF 63 (291)
T ss_dssp --CEECCTTCEEEEEEC-SSS---EEEEE--EEC-CCCTTTSCSTTTTTTTTC------------------------CEE
T ss_pred EEEEEeccccEEEEEEc-CCe---EEEEE--ECC-CCCcccCCHHHHHHHHHHHHHHhcCcc---------c--ccEEEE
Confidence 68999999999999997 553 33222 111 111111234556666666555543111 0 124444
Q ss_pred eeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCc-eEEEEEecchhhhhcccccCCCceEEEEecccc
Q 018393 177 SFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDM-RVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT 255 (356)
Q Consensus 177 SFP~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v-~v~aivNDTVaTLla~~y~~~~~~iGlIlGTGt 255 (356)
+.|=-- ... +. .|.+.|+++ ++. ..+.|.||..+.+++.. ..+.-+.+|+|||.
T Consensus 64 g~pG~~--~~~----------------~~----~l~~~l~~~-~~~~~pv~v~NDa~~aalge~--g~~~~v~v~~GTGi 118 (291)
T 1zxo_A 64 YGAGCT--PEK----------------AP----VLRRAIADS-LPVIGNIKANSDMLAAAHGLC--GQKAGIACILGTGS 118 (291)
T ss_dssp ECTTCC--TTT----------------TH----HHHHHHHHH-SCCCSCCEEECSHHHHHHHTT--TTSCBEEEEESSSE
T ss_pred EcCCCC--HHH----------------HH----HHHHHHHHh-cCCCceEEEECcHHHHHHhhc--CCCCcEEEEeCCCh
Confidence 444210 000 11 445555554 222 24689999999988764 44567899999999
Q ss_pred cceeec
Q 018393 256 NAAYVE 261 (356)
Q Consensus 256 NacY~e 261 (356)
+++.+.
T Consensus 119 ~g~gi~ 124 (291)
T 1zxo_A 119 NSCFYN 124 (291)
T ss_dssp EEEEEC
T ss_pred heEEEC
Confidence 855543
No 20
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=98.14 E-value=1.8e-05 Score=77.84 Aligned_cols=139 Identities=21% Similarity=0.263 Sum_probs=91.8
Q ss_pred ccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHH---HHHHHHhhcCCCCCCCCCcc
Q 018393 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAA---ALAKFVATEGEGFHVSPGRQ 169 (356)
Q Consensus 93 E~G~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~---~I~~fl~~~~~~~~~~~~~~ 169 (356)
+.+.+|++|+|||++|+++++ .|+ +.... ..++.|.. +.+++++.|++ .|.++++ .+.
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d-~G~---il~~~-~~~~~~~~----~~~~~l~~i~~~~~~i~~~~~----------~~i 67 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQ-GGK---EIADP-VVLPACAD----CLDKCLGNLVEGFKAIQAGLP----------EAP 67 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEE-TTE---ECSCC-EEEECCTT----CHHHHHHHHHHHHHHHHTTCS----------SCC
T ss_pred CCCEEEEEEECcceEEEEEEE-CCE---EEEEE-EEEECCCC----CHHHHHHHHHHHHHHHHHHhh----------cCC
Confidence 356789999999999999998 653 22111 13444432 57889999888 6666543 122
Q ss_pred eeeeeeeeeeeeeccCCceEEEeeccceecCCCC-CCcHHHHHHHHHHHcCCCceEEEEEecchhhhhccccc-------
Q 018393 170 RELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTV-GEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH------- 241 (356)
Q Consensus 170 l~lGfTFSFP~~q~~i~~g~Li~wtKgF~~~~v~-G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~------- 241 (356)
.-+|+.+.=|++. .+|++.. .-.+ ++.. +.++.+.|++.+ ++| +.|.||.-+..++-.+.
T Consensus 68 ~gIGIavPG~Vd~---~~G~i~~-~~nl--p~w~~~~~l~~~L~~~~---g~P---V~veNDanaaAlgE~~~G~~p~~~ 135 (366)
T 3mcp_A 68 VAISFAFPGPADY---QAGIIGD-LPNF--PSFRGGVALGPFLEDIF---GIP---VFINNDGSLFAYGEALTGVLPEIN 135 (366)
T ss_dssp CEEEEECCSSEET---TTTEECC-CTTC--GGGTTCBCHHHHHHHHH---CSC---EEEECHHHHHHHHHHHTSHHHHHH
T ss_pred eEEEEEecceEeC---CCCEEEe-CCCc--ccccCCCCHHHHHHHHH---CCC---EEEechhhHHHHHHHHhCCCcccc
Confidence 3455555555654 2465542 2212 2234 578888888766 555 68999998887765443
Q ss_pred ----------CCCceEEEEecccccceeecc
Q 018393 242 ----------NKDAIAAVILGTGTNAAYVER 262 (356)
Q Consensus 242 ----------~~~~~iGlIlGTGtNacY~e~ 262 (356)
+.+..+.+.+|||.-++++.+
T Consensus 136 ~~l~~~g~~~~~~~~v~l~lGtGIG~givi~ 166 (366)
T 3mcp_A 136 RRLREAGSTKRYKNLLGVTLGTGFGAGVVID 166 (366)
T ss_dssp HHHHHTTCCCCCCEEEEEEESSSEEEEEEET
T ss_pred cccccccccCCCCcEEEEEECCcceEEEEEC
Confidence 346789999999999999875
No 21
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=98.13 E-value=2e-05 Score=74.24 Aligned_cols=124 Identities=15% Similarity=0.146 Sum_probs=73.9
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeeee
Q 018393 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (356)
Q Consensus 97 fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfTF 176 (356)
||+||+|||+.|+++++ .|+ +.... ..+ |......+.+++++.|++.|.+.+.... .. ..|+.+
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~---il~~~--~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~-------~~--i~~igi 65 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGK---SLGRF--QTS-GINPFQQDRNEIDTALRSEVLPAIGQKA-------SS--IRAVYF 65 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTE---EEEEE--EEE-CCCTTTSCHHHHHHHHTTTTHHHHTTST-------TT--CCEEEE
T ss_pred EEEEEeCccceEEEEEe-CCe---EEEEE--ECC-CCCcccCCHHHHHHHHHHHHHHHhCCCc-------cc--ccEEEE
Confidence 79999999999999998 552 33222 111 2112122467788888877776542110 01 224444
Q ss_pred eeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCc-eEEEEEecchhhhhcccccCCCceEEEEecccc
Q 018393 177 SFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDM-RVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT 255 (356)
Q Consensus 177 SFP~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v-~v~aivNDTVaTLla~~y~~~~~~iGlIlGTGt 255 (356)
+.|= .. .+-...|++.|+++ ++. ..+.|.||..+..++.. ..+.-+.+|+|||.
T Consensus 66 g~pG---------------------~~-~~~~~~l~~~l~~~-~~~~~pv~v~NDa~~aa~ge~--g~~~~v~v~~GTGi 120 (291)
T 1zbs_A 66 YGAG---------------------CT-PAKAPMLNEALDSM-LPHCDRIEVAGDMLGAARALC--GDSEGIACILGTGS 120 (291)
T ss_dssp EETT---------------------CC-TTTHHHHHHHHHHH-STTCSEEEEECHHHHHHHHHT--TTSCEEEEEESSSE
T ss_pred ECCC---------------------CC-hHHHHHHHHHHHHh-cCCCCcEEEeCcHHHHHHhhc--CCCCcEEEEecCCh
Confidence 5441 11 00012455555554 233 36799999999988853 44667999999999
Q ss_pred cceeec
Q 018393 256 NAAYVE 261 (356)
Q Consensus 256 NacY~e 261 (356)
+++.+.
T Consensus 121 gg~~i~ 126 (291)
T 1zbs_A 121 NSCLFD 126 (291)
T ss_dssp EEEEEC
T ss_pred heEEEC
Confidence 966653
No 22
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=98.13 E-value=2e-05 Score=73.46 Aligned_cols=135 Identities=16% Similarity=0.207 Sum_probs=88.8
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeee
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfT 175 (356)
.+|++|+|||++|++++++.|+ +.... .++.+.. .+.+++++.|.+.+.+++.+. .-+|+.
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~~-----------~~igi~ 62 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQ---IRDRR--ELPTPAS---QTPEALRDALSALVSPLQAHA-----------QRVAIA 62 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHTTTGGGC-----------SEEEEE
T ss_pred eEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCCCC---CCHHHHHHHHHHHHHHHHhhC-----------CEEEEE
Confidence 3799999999999999988653 33322 3444432 246788888888777765321 135655
Q ss_pred eeeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhccccc----CCCceEEEEe
Q 018393 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVIL 251 (356)
Q Consensus 176 FSFP~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~----~~~~~iGlIl 251 (356)
..=|++. ++|++. ++-.+ ++..+.++.+.|++.+ ++| +.|.||..+..++-.+. +. ..+-+++
T Consensus 63 ~pG~vd~---~~g~v~-~~~~~--~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~ 129 (289)
T 2aa4_A 63 STGIIRD---GSLLAL-NPHNL--GGLLHFPLVKTLEQLT---NLP---TIAINDAQAAAWAEFQALDGDIT-DMVFITV 129 (289)
T ss_dssp ESSEEET---TEEECS-SGGGG--GGGTTCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEE
T ss_pred eccceeC---CCCEEE-eCCCC--CcccCCChHHHHHHHH---CCC---EEEechHHHHHHHHHHhCCCCCc-eEEEEEe
Confidence 5556654 234432 22222 1223567887777765 454 57899999988876543 33 7899999
Q ss_pred cccccceeecc
Q 018393 252 GTGTNAAYVER 262 (356)
Q Consensus 252 GTGtNacY~e~ 262 (356)
|||..++++.+
T Consensus 130 GtGiG~gii~~ 140 (289)
T 2aa4_A 130 STGVGGGVVSG 140 (289)
T ss_dssp SSSEEEEEEET
T ss_pred CccEEEEEEEC
Confidence 99999999865
No 23
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=98.10 E-value=3.3e-05 Score=73.28 Aligned_cols=137 Identities=18% Similarity=0.167 Sum_probs=91.3
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeeee
Q 018393 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (356)
Q Consensus 97 fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfTF 176 (356)
+|++|+|||++|++++++.+ .+ ....++.|.. ..+++++.|++.|.++++.... +..-+|+..
T Consensus 3 ~lgiDiGgt~i~~~l~d~~~---~l---~~~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~-------~i~gigi~~ 65 (302)
T 3vov_A 3 VVGLDLGGTKIAAGVFDGKR---LL---SKVVVPTPKE----GGERVAEALAEAAERAEREAGV-------RGEAIGLGT 65 (302)
T ss_dssp EEEEEECSSEEEEEEECSSS---BS---CCEEEECCSS----CHHHHHHHHHHHHHHHHHHHTC-------CCSSEEEEE
T ss_pred EEEEEEcCCEEEEEEEeCCC---cE---EEEEEcCCCC----ChHHHHHHHHHHHHHHHhhccC-------CceEEEEEe
Confidence 79999999999999998742 12 1223444542 2389999999999999876421 223344444
Q ss_pred eeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhcccc----cCCCceEEEEec
Q 018393 177 SFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVILG 252 (356)
Q Consensus 177 SFP~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y----~~~~~~iGlIlG 252 (356)
.=|++. ++|.+.. .- ..++..+.++.+.|++.+ ++| +.|.||..+..++-.+ ...+..+-+.+|
T Consensus 66 pG~vd~---~~g~v~~-~~--~~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~G 133 (302)
T 3vov_A 66 PGPLDF---RRGVIRF-AP--NIPGVQDFPIRRILEEAT---GRP---VFLENDANAAALAEHHLGAAQGEESSLYLTVS 133 (302)
T ss_dssp SSCEET---TTTEEC------CCTTCTTCCHHHHHHHHH---SSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEES
T ss_pred cccEeC---CCCEEEc-CC--CCCCcCCCChHHHHHHhh---CCC---EEEEechHHHHHHHHHhCCCCCCCCEEEEEEC
Confidence 444554 3454442 21 122344578888887765 454 5789999988777654 345778999999
Q ss_pred ccccceeecc
Q 018393 253 TGTNAAYVER 262 (356)
Q Consensus 253 TGtNacY~e~ 262 (356)
||.-++++.+
T Consensus 134 tGiG~gii~~ 143 (302)
T 3vov_A 134 TGIGGGVVLG 143 (302)
T ss_dssp SSEEEEEEET
T ss_pred CceeEEEEEC
Confidence 9999999875
No 24
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=98.02 E-value=1.8e-05 Score=75.50 Aligned_cols=143 Identities=17% Similarity=0.200 Sum_probs=87.9
Q ss_pred ccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceee
Q 018393 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (356)
Q Consensus 93 E~G~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~l 172 (356)
+.+.+|++|+|||++|++++++.|+ +.... .++.|+. ..+++++.|++.|.+++++.+. -..
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~---------~i~ 66 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGE---TLHCE--KKRTAEV----IAPGLVSGIGEMIDEQLRRFNA---------RCH 66 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEEHHHH----HTTCHHHHHHHHHHHHHHHHTE---------EEE
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCccc----cHHHHHHHHHHHHHHHHHhcCC---------Cee
Confidence 4567999999999999999998663 33322 2333322 2467888888888888765431 135
Q ss_pred eeeeeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhcccc---cCCCceE
Q 018393 173 GFTFSFP--VRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY---HNKDAIA 247 (356)
Q Consensus 173 GfTFSFP--~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y---~~~~~~i 247 (356)
|+.++.| ++. ++|.++.- -.+...+.-+.++.+.|++.+ ++| +.+-||.-+..++... ......+
T Consensus 67 gigi~~pG~vd~---~~g~v~~~-~~l~~~~~~~~~l~~~l~~~~---~~p---v~v~NDanaaa~~e~~~~~~~~~~~~ 136 (310)
T 3htv_A 67 GLVMGFPALVSK---DKRTIIST-PNLPLTAADLYDLADKLENTL---NCP---VEFSRDVNLQLSWDVVENRLTQQLVL 136 (310)
T ss_dssp EEEEEESSCBCT---TSSCBCSC-CSSSCCHHHHTTHHHHHHHHH---TSC---EEEEEHHHHHHHHHHHHTTCTTSCEE
T ss_pred EEEEeccccEeC---CCCEEEeC-CCCCCccccCccHHHHHHHHh---CCC---EEEeeHHHHHHHHHHhhcccCCceEE
Confidence 6666665 443 23433321 111111000135666666554 554 5789999887653221 2345678
Q ss_pred EEEecccccceeeccc
Q 018393 248 AVILGTGTNAAYVERA 263 (356)
Q Consensus 248 GlIlGTGtNacY~e~~ 263 (356)
.+.+|||.-++.+..-
T Consensus 137 ~v~~GtGiG~gii~~G 152 (310)
T 3htv_A 137 AAYLGTGMGFAVWMNG 152 (310)
T ss_dssp EEEESSSEEEEEEETT
T ss_pred EEEeceeEEEEEEECC
Confidence 8999999999998763
No 25
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=97.96 E-value=0.0001 Score=69.59 Aligned_cols=134 Identities=18% Similarity=0.252 Sum_probs=84.8
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeee
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfT 175 (356)
.+|++|+|||++|++++++.|+ +.... .++.|. .+.+++++.+.+ ++.+.. +..-+|+.
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~----~~~~~~~~~i~~----~~~~~~--------~i~gigi~ 63 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGE---IILTK--SAEISG----SDGDQILAEMKV----FLAENT--------DVTGIAVS 63 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEE--EEECST----TCHHHHHHHHHH----HHHTCT--------TCCEEEEE
T ss_pred EEEEEEeCCCeEEEEEECCCCC---EEEEE--EecCCC----CCHHHHHHHHHH----HHhhcC--------CeeEEEEe
Confidence 5899999999999999988653 33322 344442 233566655544 443221 22334555
Q ss_pred eeeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhcccc----cCCCceEEEEe
Q 018393 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVIL 251 (356)
Q Consensus 176 FSFP~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y----~~~~~~iGlIl 251 (356)
..=|++. ++|++..-. . .++..+.++.+.|++.+ ++| +.|.||.-+..++-.+ .+.+..+.+.+
T Consensus 64 ~pG~vd~---~~g~v~~~~-~--l~~w~~~~l~~~l~~~~---~~p---V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~ 131 (297)
T 4htl_A 64 APGYVNP---KTGLITMGG-A--IRRFDNFNLKEWLEAET---GLP---VAIENDANCALLAEKWLGKGQDLDDFLCLTI 131 (297)
T ss_dssp ESSEECT---TTCEEEECT-T--CGGGTTEEHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEE
T ss_pred cCcceeC---CCCEEEeCC-C--CCCccCCCHHHHHHHHH---CcC---EEEecHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 4445543 356654321 1 12234567877777665 555 6899999888777654 35577899999
Q ss_pred cccccceeecc
Q 018393 252 GTGTNAAYVER 262 (356)
Q Consensus 252 GTGtNacY~e~ 262 (356)
|||.-++++..
T Consensus 132 GtGiG~giv~~ 142 (297)
T 4htl_A 132 GTGIGGGIFSN 142 (297)
T ss_dssp SSSEEEEEEET
T ss_pred CcceEEEEEEC
Confidence 99999999875
No 26
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=97.92 E-value=9.7e-05 Score=70.30 Aligned_cols=133 Identities=14% Similarity=0.197 Sum_probs=86.2
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeee
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfT 175 (356)
-||++|+|||++|++++++.|+ +.... .++.| +.+++++.|++ ++.+. +..-+|+.
T Consensus 4 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~t~------~~~~~l~~i~~----~~~~~---------~i~gigi~ 59 (302)
T 3epq_A 4 MLGGIEAGGTXFVCAVGREDGT---IIDRI--EFPTX------MPDETIEXVIQ----YFSQF---------SLQAIGIG 59 (302)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEE--EEECC------CHHHHHHHHHH----HHTTS---------CCSEEEEE
T ss_pred EEEEEEECcceeEEEEEECCCc---EEEEE--EecCC------ChHHHHHHHHH----HhccC---------CceEEEEE
Confidence 4799999999999999988653 33322 33333 24566655554 33321 22345555
Q ss_pred eeeeeeecc--CCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhcccc----cCCCceEEE
Q 018393 176 FSFPVRQTS--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAV 249 (356)
Q Consensus 176 FSFP~~q~~--i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y----~~~~~~iGl 249 (356)
..=|++... ...|.+..-. ..+..+.++.+.|++.+ ++| +.+.||.-+..++-.+ .+.+..+.+
T Consensus 60 ~pG~vd~~~~~~~~G~i~~~~----~~~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~G~~~~~~~~~~l 129 (302)
T 3epq_A 60 SFGPVDNDXTSQTYGTITATP----XAGWRHYPFLQTVXNEM---XIP---VGFSTDVNAAALGEFLFGEAXGLDSCLYI 129 (302)
T ss_dssp ECSSEECCTTSTTTTEECCCS----STTTBTCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEE
T ss_pred eceeeccccccccccEEecCC----CCCccCCChHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEE
Confidence 555676532 1125554322 12345678888888776 554 6899999988777655 355788999
Q ss_pred Eecccccceeecc
Q 018393 250 ILGTGTNAAYVER 262 (356)
Q Consensus 250 IlGTGtNacY~e~ 262 (356)
.+|||.-++++.+
T Consensus 130 ~~GtGiG~gii~~ 142 (302)
T 3epq_A 130 TIGTGIGAGAIVE 142 (302)
T ss_dssp EESSSEEEEEEET
T ss_pred EECCceEEEEEEC
Confidence 9999999999875
No 27
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=97.76 E-value=0.00013 Score=71.01 Aligned_cols=189 Identities=17% Similarity=0.144 Sum_probs=103.3
Q ss_pred ccEEEEEeCCceeEEEEEEE----cCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcce
Q 018393 95 GLFYALDLGGTNFRVLRVQL----GGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (356)
Q Consensus 95 G~fLalDlGGTnlRv~~V~L----~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l 170 (356)
+.+|++|+|||++|++++++ .| .+.... . ..|. .+.+++++.|++.+.++..... .+
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~~~~~~g---~il~~~--~-~~~~----~~~~~~~~~i~~~i~~~~~~~~-------~~-- 89 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVREGKNDSV---HACVTR--Y-SMKR----KDITEIIEFFNEIIELMPASVM-------KR-- 89 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEECGGGCE---EEEEEE--E-ECTT----CBGGGHHHHHHHHHHHSCHHHH-------TT--
T ss_pred CeEEEEEEccccEEEEEEecccCCCc---cEEEEe--e-ecCC----CCHHHHHHHHHHHHHHHhhccc-------cc--
Confidence 46899999999999999998 43 233222 1 1232 2567888888888877654321 01
Q ss_pred eeeeeeeee--eeeccCCceEEEeeccceecCCCCCC-cHHHHHHHHHHHcCCCceEEEEEecchhhhhc----------
Q 018393 171 ELGFTFSFP--VRQTSIASGDLIKWTKGFSIEDTVGE-DVVGELTKAMERIGLDMRVAALVNDTIGTLAG---------- 237 (356)
Q Consensus 171 ~lGfTFSFP--~~q~~i~~g~Li~wtKgF~~~~v~G~-dv~~lL~~al~r~~l~v~v~aivNDTVaTLla---------- 237 (356)
.+|+.++.| ++. |++. .. ..+..+. ++.+++++ .+++..+.|.||..+..++
T Consensus 90 i~gigi~~pG~vd~-----g~v~-~~----~~~~~~~~~l~~~l~~-----~~~~~pv~v~NDa~aaalge~~l~~~~~~ 154 (373)
T 2q2r_A 90 VKAGVINVPGPVTG-----GAVG-GP----FNNLKGIARLSDYPKA-----LFPPGHSAILNDLEAGGFGVLAVSDAHVF 154 (373)
T ss_dssp EEEEEEEESSCEET-----TTEE-CC----CSSSBSCEEGGGSCTT-----TSCTTSEEEEEHHHHHHHHHHHHHHTTCH
T ss_pred ccEEEEEeeccccC-----CEEe-cc----CCCCCCcCCHHHHHHH-----hcCCCCEEEEccHhHHhccccccChhhhc
Confidence 345555555 444 3332 10 1111122 44333222 1334346899999998888
Q ss_pred -----ccc----------------cCCCceEEEEecccccceeecccCCCCCcCCCCCCCCcEEEEecCCCcCCCCCCCC
Q 018393 238 -----GRY----------------HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLT 296 (356)
Q Consensus 238 -----~~y----------------~~~~~~iGlIlGTGtNacY~e~~~~I~k~~~~~~~~~~miINtEwG~Fg~~~lp~T 296 (356)
-.+ ...+..+.+++|||..++++.+-.- -.+....-.|||..--+.-..+
T Consensus 155 ~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTGiG~gii~~g~l---------~~G~~~~aGE~Gh~~~~~~~~c 225 (373)
T 2q2r_A 155 SEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYYNPP---------MNQHIVVPLELGSQTLPMRKDI 225 (373)
T ss_dssp HHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSSEEEEEEEECC------------CEEEEEECGGGSBCCCSSCH
T ss_pred cccchhhcccccccccccCCCcCcCCCCCEEEEEeCCceeEEEEecCcc---------cCCCcccccccceeecCCCCCc
Confidence 222 2346789999999999999875211 1234566678886521100001
Q ss_pred hhhHhhhccCCCCCCceeeehhcccchHHHHH
Q 018393 297 EYDEALDTESLNPGEQIFEKIISGMYLGEIVR 328 (356)
Q Consensus 297 ~~D~~vD~~s~nPG~q~fEKmvSG~YLGEl~R 328 (356)
.....+-.... +.-.+|..+||..|-++.+
T Consensus 226 ~cg~~l~~~~~--~~g~lE~~~S~~~l~~~~~ 255 (373)
T 2q2r_A 226 DYIQTLHAELK--LFPNYENMVSGAGLEFHYR 255 (373)
T ss_dssp HHHHHHHHHHT--SCCBHHHHSSHHHHHHHHH
T ss_pred chhHHHHHHhh--ccccHhHhcCHHHHHHHHH
Confidence 11111111100 1345677777776655544
No 28
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=97.75 E-value=0.00024 Score=67.00 Aligned_cols=123 Identities=17% Similarity=0.160 Sum_probs=76.5
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcce-eeee
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR-ELGF 174 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l-~lGf 174 (356)
.+|++|+|||+.|++++++.|+ +.... ... |... ..+.+++++.+++.|.+++++.+... ..+ +.|.
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~---il~~~--~~~-~~~~-~~~~~~~~~~l~~~i~~~l~~~~~~~-----~~i~~~~i 79 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT---PLAMA--EGG-ASAL-SQGIAKSWQAVLSTLEAAFQQAGLPA-----APASACAI 79 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC---EEEEE--EES-CCCG-GGCHHHHHHHHHHHHHHHHHHTTCCC-----CCGGGEEE
T ss_pred EEEEEEcCccceEEEEEcCCCC---EEEEE--eCC-CCCc-ccCHHHHHHHHHHHHHHHHHhcCCCh-----hhhccceE
Confidence 4899999999999999988653 33222 111 1111 13468899999999999998754321 223 2455
Q ss_pred eeeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCC-ceEEEEEecchhhhhcccccCCCceEEEEe
Q 018393 175 TFSFP--VRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLD-MRVAALVNDTIGTLAGGRYHNKDAIAAVIL 251 (356)
Q Consensus 175 TFSFP--~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~-v~v~aivNDTVaTLla~~y~~~~~~iGlIl 251 (356)
.++.| ++... |. + |+.+ ++ -..+.|.||..+..++. +. .+..+.+++
T Consensus 80 gig~pG~v~~~~--------~~-----------~--------l~~~-~~~~~pv~v~NDa~aaa~ge-~~-~~~~v~v~~ 129 (305)
T 1zc6_A 80 GLGLSGVHNRQW--------AG-----------E--------FESQ-APGFARLSLATDGYTTLLGA-HG-GQPGIIVAL 129 (305)
T ss_dssp EEEESCCCTTSH--------HH-----------H--------HHHT-CCCCSEEEEECHHHHHHHHH-TT-TSSEEEEEE
T ss_pred EEEecCCCchHH--------HH-----------H--------HHHh-CCCCceEEEECCHHHHHHhh-cC-CCCeEEEEe
Confidence 55554 33311 21 0 2222 32 23578999999987775 33 356688999
Q ss_pred cccccceee
Q 018393 252 GTGTNAAYV 260 (356)
Q Consensus 252 GTGtNacY~ 260 (356)
|||..++.+
T Consensus 130 GTGigg~~i 138 (305)
T 1zc6_A 130 GTGSIGEAL 138 (305)
T ss_dssp SSSEEEEEE
T ss_pred cCCeEEEEE
Confidence 999964444
No 29
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=97.73 E-value=0.00013 Score=68.24 Aligned_cols=131 Identities=18% Similarity=0.272 Sum_probs=79.8
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeee
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfT 175 (356)
.+|++|+|||++|++++++.|+ +... ..++.| .+.+++.+.|.+.+. + . +..-+|+.
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~---il~~--~~~~~~-----~~~~~~~~~i~~~i~----~-~--------~i~gigi~ 61 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGK---ILDK--TSISTP-----ENLEDLLAWLDQRLS----E-Q--------DYSGIAMS 61 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCC---EEEE--EEECCC-----SSHHHHHHHHHHHHT----T-S--------CCSEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCC---EEEE--EEEeCC-----CCHHHHHHHHHHHHH----h-C--------CCcEEEEE
Confidence 3899999999999999988653 3322 234444 235666665555443 2 1 12334554
Q ss_pred eeeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhcccc--cCCCceEEEEecc
Q 018393 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY--HNKDAIAAVILGT 253 (356)
Q Consensus 176 FSFP~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y--~~~~~~iGlIlGT 253 (356)
..=|++. ++|++.. +..+ +...+.++.+.| +. .++| +.|.||..+..++-.+ ...+..+-+++||
T Consensus 62 ~pG~vd~---~~g~v~~-~~~~--~~~~~~~l~~~l-~~---~~~p---v~v~NDa~aaa~~e~~~~~~~~~~v~l~~Gt 128 (292)
T 2gup_A 62 VPGAVNQ---ETGVIDG-FSAV--PYIHGFSWYEAL-SS---YQLP---VHLENDANCVGLSELLAHPELENAACVVIGT 128 (292)
T ss_dssp ESSEECT---TTCBEES-CCSS--GGGSSSBHHHHT-GG---GCCC---EEEEEHHHHHHHHHHHHCTTCSSEEEEEESS
T ss_pred ecCcccC---CCCEEEe-cCCC--CcccCCCHHHHH-HH---cCCC---EEEechHHHHHHHHHHhcCCCCeEEEEEECC
Confidence 4445554 2354442 1111 111245666555 43 2554 5789999998887643 3456789999999
Q ss_pred cccceeecc
Q 018393 254 GTNAAYVER 262 (356)
Q Consensus 254 GtNacY~e~ 262 (356)
|..++++..
T Consensus 129 GiG~giv~~ 137 (292)
T 2gup_A 129 GIGGAMIIN 137 (292)
T ss_dssp SEEEEEEET
T ss_pred ceEEEEEEC
Confidence 999998865
No 30
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.54 E-value=0.00018 Score=67.41 Aligned_cols=116 Identities=14% Similarity=0.100 Sum_probs=73.5
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeee
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfT 175 (356)
.+|++|+|||+.|++++++.|+ +.... .++.|. ....+.+++++.|++.|.++++.. ..|+.
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~---i~~~~--~~~~~~-~~~~~~~~~~~~i~~~i~~~~~~~------------~~~ig 64 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGN---FIGEG--SSGPGN-YHNVGLTRAIENIKEAVKIAAKGE------------ADVVG 64 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSC---EEEEE--EESCCC-HHHHCHHHHHHHHHHHHHHHHTSC------------CSEEE
T ss_pred EEEEEEeCCCcEEEEEEcCCCC---EEEEE--eCCCCC-cccCCHHHHHHHHHHHHHHHHhcC------------CCEEE
Confidence 3799999999999999988653 33222 333332 111246889999999998886432 13444
Q ss_pred eeeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhcccccCCCceEEEEecccc
Q 018393 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT 255 (356)
Q Consensus 176 FSFP~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~~~~~~iGlIlGTGt 255 (356)
++.|=-. .+++. ..|.+.|++ +++ .+.+.||..+..++... .+..+-+++|||.
T Consensus 65 i~~~G~~--~~~~~-------------------~~l~~~l~~--~~~-pv~v~ND~~aaa~~e~~--~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 65 MGVAGLD--SKFDW-------------------ENFTPLASL--IAP-KVIIQHDGVIALFAETL--GEPGVVVIAGTGS 118 (299)
T ss_dssp EEETTCC--SHHHH-------------------HHHHHHHTT--SSS-EEEEEEHHHHHHHHHHT--TSCEEEEEESSSE
T ss_pred EEcCCCC--chhHH-------------------HHHHHHHHh--CCC-CEEEeCcHHHHHhhccC--CCCeEEEEecCCE
Confidence 4444221 01111 234555555 443 46889999999888654 4567889999995
No 31
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=97.33 E-value=0.0018 Score=61.85 Aligned_cols=128 Identities=16% Similarity=0.173 Sum_probs=74.2
Q ss_pred cccEEEEEeCCceeEEEEEEEc-CCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceee
Q 018393 94 KGLFYALDLGGTNFRVLRVQLG-GREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (356)
Q Consensus 94 ~G~fLalDlGGTnlRv~~V~L~-g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~l 172 (356)
.+.+|++|+|||++|++++++. + .+... ..+ |.. ..+.+. +.|.+++++... + ..
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g---~i~~~--~~~--~~~----~~~~~~----~~i~~~~~~~~~-------~--i~ 68 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASG---EISQA--KTY--SGL----DYPSLE----AVIRVYLEEHKV-------E--VK 68 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTC---CEEEE--EEE--EGG----GCSCHH----HHHHHHHHHSCC-------C--CC
T ss_pred CCEEEEEEechhheEEEEEECCCC---cEEEE--EEe--cCC----CcCCHH----HHHHHHHHhcCC-------C--cc
Confidence 4568999999999999999873 3 22221 122 221 122333 334455554321 1 34
Q ss_pred eeeeeee--eeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhccccc---------
Q 018393 173 GFTFSFP--VRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH--------- 241 (356)
Q Consensus 173 GfTFSFP--~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~--------- 241 (356)
|+.++.| ++ .+.+ . .-.+.. . .+ .+.|++.+ ++| .+.|.||.-+..++-.+.
T Consensus 69 gigi~~pG~vd-----~~~~-~-~~nl~w---~-~~-~~~l~~~~---~~p--~V~v~NDanaaalgE~~~~~~~~~~~g 131 (332)
T 1sz2_A 69 DGCIAIACPIT-----GDWV-A-MTNHTW---A-FS-IAEMKKNL---GFS--HLEIINDFTAVSMAIPMLKKEHLIQFG 131 (332)
T ss_dssp EEEEEESSCCC-----SSEE-C-CSSSCC---C-EE-HHHHHHHH---TCS--EEEEEEHHHHHHHHGGGCCGGGEEECS
T ss_pred EEEEEEeCcee-----CCEE-e-eeCCCC---c-CC-HHHHHHHh---CCC--cEEEEeCHhHHhccccccChhhheecC
Confidence 5555555 44 2332 1 111111 1 23 34444433 444 368999999988877653
Q ss_pred -----CCCceEEEEecccccceeecc
Q 018393 242 -----NKDAIAAVILGTGTNAAYVER 262 (356)
Q Consensus 242 -----~~~~~iGlIlGTGtNacY~e~ 262 (356)
..+..+.+.+|||.-++++.+
T Consensus 132 ~g~~~~~~~~~~v~~GTGiG~giv~~ 157 (332)
T 1sz2_A 132 GAEPVEGKPIAVYGAGTGLGVAHLVH 157 (332)
T ss_dssp SCCCCTTCCEEEEEESSSEEEEEEEE
T ss_pred CCCCCCCCcEEEEEcCccceEEEEec
Confidence 336678999999999999876
No 32
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=96.75 E-value=0.0026 Score=62.39 Aligned_cols=145 Identities=14% Similarity=0.138 Sum_probs=77.5
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHH---HHHHHHHHhhcCCCCCCCCCcceee
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYI---AAALAKFVATEGEGFHVSPGRQREL 172 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~I---A~~I~~fl~~~~~~~~~~~~~~l~l 172 (356)
.+|+||+|||++|++++++. .+.... .++.|..-. .+.+++.+.+ ++.|.+++++.+.. ..-..
T Consensus 3 ~vlgidiGgt~ik~al~d~~----~il~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~~~~------~~~i~ 69 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE----RMVKMQ--NFSHSPDEL-GRFQKILDQLEFREKIARQFVEETGYS------LSSFS 69 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT----EEEEEE--EEECCHHHH-HTCSSGGGGHHHHHHHHHHHHHTTTCC------GGGCS
T ss_pred eEEEEECCccceeEEEEecc----hheeee--ecccCcccc-cchhhHHHHHHHHHHHHHHHHHHcCCC------ccCce
Confidence 47999999999999999852 233322 333332100 0223445555 77888888765421 11246
Q ss_pred eeeeeeeeeeccCCceEEEeeccc----------eecCCCCCCcHHHHHHHHHHHc-CCCceEEEEEecch---------
Q 018393 173 GFTFSFPVRQTSIASGDLIKWTKG----------FSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTI--------- 232 (356)
Q Consensus 173 GfTFSFP~~q~~i~~g~Li~wtKg----------F~~~~v~G~dv~~lL~~al~r~-~l~v~v~aivNDTV--------- 232 (356)
|+ .+.|=--. ..+|.+..-+.. +..+. ++.-.+.+.|.++ ++|+ .|.||.-
T Consensus 70 gI-i~~pG~vd-~~~G~~~~i~~~~~~~l~~~~~~~~~~----nl~~~l~~~l~~~~~~Pv---~v~NDan~~~~~~~a~ 140 (381)
T 1saz_A 70 AF-VSRGGLLD-PIPGGVYLVDGLMIKTLKSGKNGEHAS----NLGAIIAHRFSSETGVPA---YVVDPVVVDEMEDVAR 140 (381)
T ss_dssp EE-EEECCSCS-CBCSSEEECCHHHHHHHHHTTTCCCTT----HHHHHHHHHHHHHHCCCE---EEESCTTBCCCCGGGT
T ss_pred EE-EecCCCCC-CCCCceEecCHHHHHHHHhcccccChh----hhhHHHHHHHHHhcCCCE---EEeCCCccccCcHHHH
Confidence 77 77763211 112333100000 00011 1122334444443 6664 5999996
Q ss_pred hhhh-----------------cc-c-c---cCCC--ceEEEEecccccceeecc
Q 018393 233 GTLA-----------------GG-R-Y---HNKD--AIAAVILGTGTNAAYVER 262 (356)
Q Consensus 233 aTLl-----------------a~-~-y---~~~~--~~iGlIlGTGtNacY~e~ 262 (356)
+.-+ +- . + .+.+ ..+.+.+|||.-+|.+.+
T Consensus 141 aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGiG~g~i~~ 194 (381)
T 1saz_A 141 VSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGISIAAHRK 194 (381)
T ss_dssp BCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSEEEEEEET
T ss_pred HcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCcEEEEEEC
Confidence 4433 22 1 1 1224 789999999999999875
No 33
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=96.66 E-value=0.012 Score=53.96 Aligned_cols=126 Identities=20% Similarity=0.247 Sum_probs=70.7
Q ss_pred cccEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeee
Q 018393 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (356)
Q Consensus 94 ~G~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lG 173 (356)
.+.+|++|+|||++|+ +...+. + . ...+.|. ..+.+++.+.|++ ++++. +..-+|
T Consensus 5 ~~~~lgiDIGGT~i~~--~d~~g~---~-~---~~~~t~~---~~~~~~~~~~i~~----~i~~~---------~i~gig 59 (226)
T 3lm2_A 5 DQTVLAIDIGGSHVKI--GLSTDG---E-E---RKVESGK---TMTGPEMVAAVTA----MAKDM---------TYDVIA 59 (226)
T ss_dssp GCCEEEEEECSSEEEE--EETTTC---C-E---EEEECCT---TCCHHHHHHHHHH----HTTTC---------CCSEEE
T ss_pred CCEEEEEEECCCEEEE--EECCCC---E-E---EEEECCC---CCCHHHHHHHHHH----HHHhC---------CCCEEE
Confidence 4579999999999994 444332 2 1 1233332 2244566665554 44322 112344
Q ss_pred eeeeeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEecchhhhhcccccCCCceEEEEecc
Q 018393 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGT 253 (356)
Q Consensus 174 fTFSFP~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~~~~~~iGlIlGT 253 (356)
+.+.=|++. ++. +..+-.+. ++-.+.++. + +.++| +.+.||.-+.-++-.+. ...+.+.+||
T Consensus 60 i~~pG~Vd~----~~~-~~~~~nl~-~~w~~~~l~----~---~~~~p---v~v~NDanaaalge~~~--~~~~~l~~Gt 121 (226)
T 3lm2_A 60 MGYPGPVVH----NKP-LREPVNLG-EGWVGYDYE----G---AFGRP---VRIVNDALMQAIGSYNG--GRMLFLGLGT 121 (226)
T ss_dssp EEESSCEET----TEE-CSCCTTSC-SCCTTCCHH----H---HHTSC---EEEEEHHHHHHHHHCCS--SEEEEEEESS
T ss_pred EEEEeEEEC----CeE-EEECCcCC-ccccCCchH----H---hcCCe---EEEEEHHHHHHHHHhhc--CcEEEEEeCC
Confidence 444445653 232 22221110 122344543 2 23554 57899998887776554 5788999999
Q ss_pred cccceeecc
Q 018393 254 GTNAAYVER 262 (356)
Q Consensus 254 GtNacY~e~ 262 (356)
|.-++.+..
T Consensus 122 GiG~gii~~ 130 (226)
T 3lm2_A 122 GLGAAMIVE 130 (226)
T ss_dssp SEEEEEEET
T ss_pred ceEEEEEEC
Confidence 999998864
No 34
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.30 E-value=0.037 Score=56.15 Aligned_cols=64 Identities=20% Similarity=0.295 Sum_probs=45.0
Q ss_pred ccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeec--cCc-cccccCchHHHHHHHHHHHHHHhhcC
Q 018393 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVS--IPP-HLMTGSSHELFDYIAAALAKFVATEG 159 (356)
Q Consensus 93 E~G~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~~~~~~LFd~IA~~I~~fl~~~~ 159 (356)
|...||+||+|+|+.|+++++..|+ ++...+..++ .|+ .....+.+++++-+.++|.+.+++.+
T Consensus 1 ~~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~ 67 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKAD 67 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEEcCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 4456899999999999999976543 3333333332 132 22345678999999999999988754
No 35
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.23 E-value=0.035 Score=56.32 Aligned_cols=63 Identities=24% Similarity=0.296 Sum_probs=44.1
Q ss_pred cccEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeecc--Cc-cccccCchHHHHHHHHHHHHHHhhcC
Q 018393 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEG 159 (356)
Q Consensus 94 ~G~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~LFd~IA~~I~~fl~~~~ 159 (356)
..-+|+||+|+|+.|++++...| .++...+..++. |+ .....+.+++++.+.++|.+.+++.+
T Consensus 6 ~~~~lgIDiGtts~k~~l~d~~G---~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~ 71 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVRLPD---TVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAG 71 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEETTT---EEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEecCcceEEEEECCCC---CEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcC
Confidence 44689999999999999998544 344433333432 22 23345688999999999999987653
No 36
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=94.94 E-value=0.066 Score=54.20 Aligned_cols=61 Identities=18% Similarity=0.345 Sum_probs=43.9
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeec--cCc-cccccCchHHHHHHHHHHHHHHhhcC
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVS--IPP-HLMTGSSHELFDYIAAALAKFVATEG 159 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~~~~~~LFd~IA~~I~~fl~~~~ 159 (356)
.+|+||+|+|+.|+++++..|+ ++...+..++ .|+ .....+.+++++.+.++|.+.+++.+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~ 69 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRNGK---KIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESG 69 (506)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCceEEEEECCCCC---EEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999987553 3333333333 222 23345688999999999999988754
No 37
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=94.82 E-value=0.056 Score=54.57 Aligned_cols=61 Identities=15% Similarity=0.312 Sum_probs=43.5
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeec--cCc-cccccCchHHHHHHHHHHHHHHhhcC
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVS--IPP-HLMTGSSHELFDYIAAALAKFVATEG 159 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~~~~~~LFd~IA~~I~~fl~~~~ 159 (356)
.+|+||+|+|+.|+++++..|+ +....+..++ .|+ .....+.+++++-+.++|.+.+++.+
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~ 70 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKGE---IAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINEND 70 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEEeCccceEEEEEcCCCC---EEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999987553 3333333333 122 23345678999999999999987654
No 38
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=94.71 E-value=0.094 Score=52.77 Aligned_cols=61 Identities=25% Similarity=0.319 Sum_probs=42.6
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeec--cCc-cccccCchHHHHHHHHHHHHHHhhcC
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVS--IPP-HLMTGSSHELFDYIAAALAKFVATEG 159 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~~~~~~LFd~IA~~I~~fl~~~~ 159 (356)
.||+||+|||+.|+++++..|+ +.......++ .|+ .....+.+++++.+.++|.+.+++.+
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~ 66 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGR---PVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAG 66 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEeeCCcceEEEEECCCCC---EEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcC
Confidence 4899999999999999976542 3333333332 122 12334678999999999999988754
No 39
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=94.67 E-value=0.077 Score=53.97 Aligned_cols=61 Identities=15% Similarity=0.297 Sum_probs=43.6
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeec--cCc-cccccCchHHHHHHHHHHHHHHhhcC
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVS--IPP-HLMTGSSHELFDYIAAALAKFVATEG 159 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~~~~~~LFd~IA~~I~~fl~~~~ 159 (356)
.||+||+|+|+.|++++...|+ ++...+.+++ .|+ .....+.+++++-+.++|.+.+++.+
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~ 90 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQK---IAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSG 90 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTT
T ss_pred eEEEEEeCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999987553 3333333333 232 23345688999999999999987654
No 40
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=94.62 E-value=0.071 Score=53.44 Aligned_cols=59 Identities=17% Similarity=0.345 Sum_probs=41.2
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeEeecc--Cc-cccccCchHHHHHHHHHHHHHHhhc
Q 018393 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATE 158 (356)
Q Consensus 97 fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~LFd~IA~~I~~fl~~~ 158 (356)
||+||+|||+.|+++++..| .+....+..+++ |+ .....+.+++++.+.++|.+.+++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g---~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~ 63 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQG---EVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQH 63 (484)
T ss_dssp EEEEEECSSEEEEEEECTTS---CEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEecCcccEEEEECCCC---CEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhC
Confidence 79999999999999997644 233333333321 22 2233467899999999999988764
No 41
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=94.45 E-value=0.075 Score=53.87 Aligned_cols=57 Identities=11% Similarity=0.143 Sum_probs=41.2
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeecc--Cc-cccccCchHHHHHHHHHHHHHH
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFV 155 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~LFd~IA~~I~~fl 155 (356)
.+|+||+|+|+.|+++++..|+ ++...+..+++ |+ .....+.+++++.+.++|.+.+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~ 65 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRDGG---LHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW 65 (511)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCceEEEEECCCCC---EEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 5899999999999999977542 33333333332 22 2334568899999999999988
No 42
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.35 E-value=0.082 Score=53.72 Aligned_cols=65 Identities=20% Similarity=0.271 Sum_probs=45.6
Q ss_pred ccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeecc--Cc-cccccCchHHHHHHHHHHHHHHhhcCC
Q 018393 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGE 160 (356)
Q Consensus 93 E~G~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~LFd~IA~~I~~fl~~~~~ 160 (356)
|+--||+||+|.|+.|++++...|+ ++...+.+++. |+ .....+.+++++-+.++|.+.+++.+.
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~~G~---~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~ 69 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADI 69 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEEEccccceeeeEEcCCCC---EEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCC
Confidence 5556789999999999999875443 34333334432 32 234457889999999999999987653
No 43
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=94.34 E-value=0.075 Score=54.39 Aligned_cols=61 Identities=25% Similarity=0.420 Sum_probs=43.6
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeecc--C-ccccccCchHHHHHHHHHHHHHHhhcC
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--P-PHLMTGSSHELFDYIAAALAKFVATEG 159 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~I--p-~~~~~~~~~~LFd~IA~~I~~fl~~~~ 159 (356)
-+|+||+|+|+.|++++...|+ ++...+..+++ | +.....+.+++++.+.++|.+.+++.+
T Consensus 6 ~~lgIDiGtts~ka~l~d~~G~---il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~ 69 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQGR---MVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQAD 69 (554)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEECcccEEEEEECCCCC---EEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999986543 33333333321 2 223445688999999999999988654
No 44
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=94.26 E-value=0.1 Score=52.85 Aligned_cols=60 Identities=12% Similarity=0.203 Sum_probs=43.0
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeecc--Cc-cccccCchHHHHHHHHHHHHHHhhc
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATE 158 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~LFd~IA~~I~~fl~~~ 158 (356)
.||+||+|+|+.|++++...|+ ++...+.+++. |+ .....+.+++++.+.++|.+.+++.
T Consensus 5 ~~lgIDiGtts~K~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~ 67 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDINGK---AVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKI 67 (504)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEecCCceEEEEEcCCCC---EEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhC
Confidence 5899999999999999986542 34433334432 22 2334568899999999999998764
No 45
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.23 E-value=0.13 Score=51.88 Aligned_cols=60 Identities=7% Similarity=0.005 Sum_probs=42.3
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeecc--Cc-cccccCchHHHHHHHHHHHHHHhhc
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATE 158 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~LFd~IA~~I~~fl~~~ 158 (356)
.||+||+|||+.|+++++..|+ +.......++. |+ .....+.+++++.+.++|.+.+++.
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~ 67 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELN---IVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVL 67 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCcceEEEEECCCCC---EEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHh
Confidence 4799999999999999987543 34333333331 22 1223467899999999999998764
No 46
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=94.17 E-value=0.096 Score=52.72 Aligned_cols=61 Identities=16% Similarity=0.195 Sum_probs=42.7
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeecc--Cc-cccccCchHHHHHHHHHHHHHHhhcC
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEG 159 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~LFd~IA~~I~~fl~~~~ 159 (356)
.||+||+|||+.|+++++..| .+....+..++. |+ .....+.+++++.+.++|.+.+++.+
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g---~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~ 67 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRES---NIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSAR 67 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTC---CEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCchhEEEEECCCC---CEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 489999999999999997644 244333333331 22 12234678999999999999988754
No 47
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.15 E-value=0.12 Score=52.07 Aligned_cols=61 Identities=13% Similarity=0.222 Sum_probs=42.6
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeecc--Cc-cccccCchHHHHHHHHHHHHHHhhcC
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEG 159 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~LFd~IA~~I~~fl~~~~ 159 (356)
.+|+||+|+|+.|+++++..|+ +.......++. |+ .....+.+++++.+.++|.+.+++.+
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~ 66 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGE---IYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGN 66 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEecCCcceEEEEECCCCC---EEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcC
Confidence 4799999999999999976543 33333333331 22 12234678999999999999988754
No 48
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=93.74 E-value=0.13 Score=52.76 Aligned_cols=61 Identities=11% Similarity=0.267 Sum_probs=42.9
Q ss_pred cEEEEEeCCceeEEEEEEE-cCCcceeEEEEeEeec-------cC-------ccccccCchHHHHHHHHHHHHHHhhcC
Q 018393 96 LFYALDLGGTNFRVLRVQL-GGREGRVVKQEFEEVS-------IP-------PHLMTGSSHELFDYIAAALAKFVATEG 159 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L-~g~~~~~~~~~~~~~~-------Ip-------~~~~~~~~~~LFd~IA~~I~~fl~~~~ 159 (356)
-||+||+|+|+.|++++.. .|+ ++......|+ .| ......+.+++++-+.++|.+.+++.+
T Consensus 6 ~~lgIDiGTts~Ka~l~d~~~G~---i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~~ 81 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDLSNGQ---ELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESG 81 (572)
T ss_dssp EEEEEEECSSEEEEEEEETTTCC---EEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC--
T ss_pred EEEEEecCCcceEEEEEECCCCe---EEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999987 553 4444444443 12 223344677999999999999987654
No 49
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=92.96 E-value=0.62 Score=46.48 Aligned_cols=79 Identities=19% Similarity=0.137 Sum_probs=47.4
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEee-c--cCc-cccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCccee
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEV-S--IPP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~-~--Ip~-~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~ 171 (356)
.||+||+|+|+.|+++++..|+.-.........+ + .|. .....+.+++++-+.+++.+...... +..-
T Consensus 5 ~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~~~--------~i~~ 76 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAAGI--------AIDS 76 (489)
T ss_dssp EEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHTTC--------CCCE
T ss_pred eEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhCCC--------CceE
Confidence 4899999999999999988654221111111110 0 111 11223567899999999888765211 2345
Q ss_pred eeeee----eeeeee
Q 018393 172 LGFTF----SFPVRQ 182 (356)
Q Consensus 172 lGfTF----SFP~~q 182 (356)
+|++- .-|++.
T Consensus 77 Igis~q~~~~v~~D~ 91 (489)
T 2uyt_A 77 IGIDTWGVDFVLLDQ 91 (489)
T ss_dssp EEEEECSSCEEEECT
T ss_pred EEEecCcccEEEECC
Confidence 77776 666766
No 50
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=90.81 E-value=0.33 Score=49.04 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=39.3
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeecc-C-ccccccCchHHHHHHHHHHHHHH
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI-P-PHLMTGSSHELFDYIAAALAKFV 155 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~I-p-~~~~~~~~~~LFd~IA~~I~~fl 155 (356)
.||+||+|+|+.|+++++-.| .+....+.++++ | +.....+.+++++.+.++|.+.+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G---~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~ 65 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDG---RMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA 65 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTS---CEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT
T ss_pred eEEEEEcCCCCeEEEEEECCC---cEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH
Confidence 489999999999999997433 244433333332 1 12334468899999999999986
No 51
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=88.82 E-value=0.85 Score=42.04 Aligned_cols=169 Identities=16% Similarity=0.217 Sum_probs=84.2
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcCCCCCCCCCcceeeeeee
Q 018393 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (356)
Q Consensus 97 fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l~lGfTF 176 (356)
+|+||.|+||+++++++ ++ .... .+++|-. ...+.+++..++.+.+.. .. ...
T Consensus 5 ~L~IDIGNT~ik~gl~~--~~--~l~~----~~r~~T~-~~~t~de~~~~l~~l~~~----~~--------~~i------ 57 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITE--DG--KTFR----RWRLSTG-VFQTEDELFSHLHPLLGD----AM--------REI------ 57 (249)
T ss_dssp EEEEEECSSEEEEEEES--SS--SSCE----EEEEECC-TTCCHHHHHHHHHHHHGG----GG--------GGE------
T ss_pred EEEEEECCCeEEEEEEE--CC--EEEE----EEEecCC-CCCCHHHHHHHHHHHHhh----cc--------ccC------
Confidence 79999999999999985 22 2222 2334322 123567777766543322 00 000
Q ss_pred eeeeeeccCCceEEEeeccceecCCCCCCcHHHHHHHHHHHc-CCCceEE-----EEE----e------cchhhhhcccc
Q 018393 177 SFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI-GLDMRVA-----ALV----N------DTIGTLAGGRY 240 (356)
Q Consensus 177 SFP~~q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~-~l~v~v~-----aiv----N------DTVaTLla~~y 240 (356)
++.-++.| +-.+...+++++++. +++..++ .+- | |-.+..+++..
T Consensus 58 ------------------~~i~IsSV-vp~~~~~~~~~~~~~~~~~p~~v~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~ 118 (249)
T 3bex_A 58 ------------------KGIGVASV-VPTQNTVIERFSQKYFHISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFVK 118 (249)
T ss_dssp ------------------EEEEEEES-CHHHHHHHHHHHHHHHSCCCEECCCCSSSSEECSSCGGGSCHHHHHHHHHHHH
T ss_pred ------------------CEEEEEcC-cHHHHHHHHHHHHHhcCCCeEEEEccCCCceeccCChhhcCHHHHHHHHHHHH
Confidence 11222333 245666677777664 4432221 011 1 22333444333
Q ss_pred cCCCceEEEEecccccceeecccCCCCCcCCCCCCCCcEEE---EecCCCc--CCCCCCCChhhHhhhccCCCCCCceee
Q 018393 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVI---NMEWGNF--RSSHLPLTEYDEALDTESLNPGEQIFE 315 (356)
Q Consensus 241 ~~~~~~iGlIlGTGtNacY~e~~~~I~k~~~~~~~~~~miI---NtEwG~F--g~~~lp~T~~D~~vD~~s~nPG~q~fE 315 (356)
.++...+-+=+||.+..+++ .-.. +.+ -+|. ++=.-++ +...||.-+.+ .....+|+..-|
T Consensus 119 ~~~~~~iVvD~GTA~T~d~v-~~g~---~lG------G~I~PGi~l~~~aL~~~ta~Lp~v~~~----~~~~~~g~nT~~ 184 (249)
T 3bex_A 119 EYGKNGIIIDMGTATTVDLV-VNGS---YEG------GAILPGFFMMVHSLFRGTAKLPLVEVK----PADFVVGKDTEE 184 (249)
T ss_dssp HTCSCEEEEEESSEEEEEEE-ETTE---EEE------EEEEECHHHHHHHHHHTCSSCCCCCCC----CCCSSSBSSHHH
T ss_pred HcCCCEEEEEcCCceEEEEE-eCCe---Eee------EEECccHHHHHHHHHHhhhcCCCCccc----CCCCCCCCCHHH
Confidence 33456677788999999998 4211 111 0110 0000000 01135543222 223456888889
Q ss_pred ehhcccchHH
Q 018393 316 KIISGMYLGE 325 (356)
Q Consensus 316 KmvSG~YLGE 325 (356)
-|-||.|.|-
T Consensus 185 ai~sGi~~g~ 194 (249)
T 3bex_A 185 NIRLGVVNGS 194 (249)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999977653
No 52
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=87.53 E-value=1.2 Score=45.24 Aligned_cols=53 Identities=13% Similarity=0.091 Sum_probs=37.2
Q ss_pred cEEEEEeCCceeEEEEEE-EcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHH
Q 018393 96 LFYALDLGGTNFRVLRVQ-LGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKF 154 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~-L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~f 154 (356)
.+|+||+|+|+.|++++. -.| .++...+.. .|. ....+.+++++.+.+++.+.
T Consensus 6 ~~lgIDiGtts~ka~l~d~~~G---~i~~~~~~~--~~g-~~e~d~~~~~~~i~~~l~~~ 59 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTDAETG---ELVRFGQAK--HPN-GTSVDPSYWWSAFQEAAEQA 59 (515)
T ss_dssp EEEEEEECSSEEEEEEEETTTC---CEEEEEEEE--CCS-SSEECTHHHHHHHHHHHHHT
T ss_pred EEEEEEeccccEEEEEEECCCC---eEEEEEEEe--CCC-CceECHHHHHHHHHHHHHhc
Confidence 589999999999999998 444 234333333 343 33446789999998888763
No 53
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=81.84 E-value=12 Score=33.40 Aligned_cols=29 Identities=14% Similarity=0.239 Sum_probs=21.2
Q ss_pred HHHHHHHHcCCCceEEEEEecchhhhhcccc
Q 018393 210 ELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240 (356)
Q Consensus 210 lL~~al~r~~l~v~v~aivNDTVaTLla~~y 240 (356)
.+++++++.|+ ++..++++..|.+.+...
T Consensus 110 ~~~~~~~~~g~--~~~~i~~e~~A~a~~~~~ 138 (272)
T 3h1q_A 110 ACGHVVAGAGL--ELVTLVDEPVAAARALGI 138 (272)
T ss_dssp HHHHHHHHTTC--EEEEEECHHHHHHHHHTC
T ss_pred HHHHHHHHcCC--eeeecccHHHHHHHHHcC
Confidence 46667777664 567889999999876544
No 54
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=79.91 E-value=13 Score=34.47 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=28.0
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHH
Q 018393 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAAL 151 (356)
Q Consensus 97 fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I 151 (356)
+|+||.|.||+++++++ ++ .... .++++-. ...+.+++..++.+.+
T Consensus 2 lL~IDIGNT~ik~gl~~--~~--~l~~----~~r~~T~-~~~t~de~~~~l~~ll 47 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE--EG--ELRQ----HWRMETD-RHKTEDEYGMLVKQLL 47 (268)
T ss_dssp EEEEEECSSEEEEEEEE--TT--EEEE----EEEEECC-TTCCHHHHHHHHHHHH
T ss_pred EEEEEECcCcEEEEEEE--CC--EEEE----EEEecCC-CcCCHHHHHHHHHHHH
Confidence 69999999999999985 22 2222 3444322 1234567766665433
No 55
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=79.88 E-value=2.5 Score=39.43 Aligned_cols=49 Identities=14% Similarity=0.155 Sum_probs=30.4
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHHhhcC
Q 018393 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEG 159 (356)
Q Consensus 97 fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl~~~~ 159 (356)
+|+||+|+||.++++++ ++ .+. ..+++|-. ..+.+++.. .+.++++..+
T Consensus 4 lL~IDIGNT~iK~gl~d--~~--~l~----~~~r~~T~--~~t~de~~~----~l~~ll~~~~ 52 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFD--GD--EIK----LRFRHTSK--VSTSDELGI----FLKSVLRENN 52 (266)
T ss_dssp EEEEEECSSEEEEEEEE--TT--EEE----EEEEEECS--CCCHHHHHH----HHHHHHHTTT
T ss_pred EEEEEECCCeEEEEEEE--CC--EEE----EEEEecCC--CCCHHHHHH----HHHHHHHHcC
Confidence 79999999999999985 22 222 24555544 345566544 4455555443
No 56
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=72.77 E-value=18 Score=32.62 Aligned_cols=36 Identities=6% Similarity=0.085 Sum_probs=25.5
Q ss_pred EEEecchhhhhcccccCCCceEEEEeccccc-ceeec
Q 018393 226 ALVNDTIGTLAGGRYHNKDAIAAVILGTGTN-AAYVE 261 (356)
Q Consensus 226 aivNDTVaTLla~~y~~~~~~iGlIlGTGtN-acY~e 261 (356)
-.||.-+|..++..+.++....-+.+|-|+. +.+++
T Consensus 75 ~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~ 111 (276)
T 4ehu_A 75 KQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLD 111 (276)
T ss_dssp EECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEEC
T ss_pred cccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEE
Confidence 4679999998888888877766666665544 44553
No 57
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=72.77 E-value=15 Score=35.24 Aligned_cols=53 Identities=17% Similarity=0.144 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHcCCCceEEEEEecchhhhhcccccC---CCceEEEE--ecccccceeec
Q 018393 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN---KDAIAAVI--LGTGTNAAYVE 261 (356)
Q Consensus 207 v~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~~---~~~~iGlI--lGTGtNacY~e 261 (356)
-.+.+++|.++-|+ +++.++|+.+|..++..... .....-+| +|-||--..+.
T Consensus 165 ~r~~~~~a~~~AGl--~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~ 222 (409)
T 4gni_A 165 QKAALIAAAAAADL--EVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVL 222 (409)
T ss_dssp HHHHHHHHHHHTTC--EEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHHHcCC--CeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEE
Confidence 34678888888886 67899999999988876643 22222233 56666544443
No 58
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=70.42 E-value=15 Score=34.87 Aligned_cols=53 Identities=21% Similarity=0.199 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHcCCCceEEEEEecchhhhhcccccCC----CceEEEE--ecccccceeec
Q 018393 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK----DAIAAVI--LGTGTNAAYVE 261 (356)
Q Consensus 207 v~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~~~----~~~iGlI--lGTGtNacY~e 261 (356)
-.+.+++|.++.|+ +++.++|+.+|..++...... ....-+| +|-||--..+-
T Consensus 173 ~r~~~~~a~~~AGl--~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~ 231 (404)
T 3i33_A 173 QRQATKDAGTITGL--NVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSIL 231 (404)
T ss_dssp HHHHHHHHHHHHTC--EEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHHHcCC--CeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEE
Confidence 35677888877776 678999999999887655432 2222233 56666544443
No 59
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=67.93 E-value=21 Score=33.65 Aligned_cols=48 Identities=21% Similarity=0.219 Sum_probs=31.1
Q ss_pred HHHHHHHHHHcCCCceEEEEEecchhhhhcccccCC-CceEEEE--ecccccc
Q 018393 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK-DAIAAVI--LGTGTNA 257 (356)
Q Consensus 208 ~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~~~-~~~iGlI--lGTGtNa 257 (356)
.+.+.+|.++.|+ +++.++|+.+|..++...... ....-+| +|-||--
T Consensus 169 r~~~~~a~~~aGl--~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~d 219 (394)
T 3qfu_A 169 RQATKDAGTIAGL--NVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFD 219 (394)
T ss_dssp HHHHHHHHHHTTC--EEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEE
T ss_pred HHHHHHHHHHcCC--ceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCcee
Confidence 5667788877776 678999999999887644322 2222233 5666653
No 60
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=66.95 E-value=15 Score=37.17 Aligned_cols=40 Identities=33% Similarity=0.390 Sum_probs=29.2
Q ss_pred CCC--ceEEEEEecchhhhhcccccCCCceEEEEecccccceee
Q 018393 219 GLD--MRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYV 260 (356)
Q Consensus 219 ~l~--v~v~aivNDTVaTLla~~y~~~~~~iGlIlGTGtNacY~ 260 (356)
|++ +.|++-.=|+.+.+++.. . ....+-+++||++-....
T Consensus 269 Gl~~g~pV~~g~~D~~aa~~g~~-~-~~g~~~~s~GTs~~~~~~ 310 (538)
T 4bc3_A 269 GFPPGCKVVAFTGDNPASLAGMR-L-EEGDIAVSLGTSDTLFLW 310 (538)
T ss_dssp CCCTTCEEECCEEHHHHHHHHTT-C-CTTCEEEEESSSEEEEEE
T ss_pred CCCCCCeEEEecccHHhhhhccc-c-CCCcEEEEeccchheEEe
Confidence 663 778888899999999875 3 345678899998655443
No 61
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=57.10 E-value=40 Score=31.60 Aligned_cols=62 Identities=19% Similarity=0.256 Sum_probs=41.6
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCcccc-ccC-chHHHHHHHHHHHHHHhh
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLM-TGS-SHELFDYIAAALAKFVAT 157 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~-~~~-~~~LFd~IA~~I~~fl~~ 157 (356)
+|-|||+|-.++|+.++++.+....++....+..++-+.+- ++. .++=.+-..+++..|.+.
T Consensus 5 ~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~ 68 (315)
T 3mdq_A 5 RIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVI 68 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHH
Confidence 47899999999999999996533333443444555666542 222 556677777888888654
No 62
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=54.51 E-value=1e+02 Score=30.57 Aligned_cols=45 Identities=18% Similarity=0.272 Sum_probs=29.8
Q ss_pred HHHHHHHHHcCCCceEEEEEecchhhhhcccccCCCceEEEEe--cccc
Q 018393 209 GELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVIL--GTGT 255 (356)
Q Consensus 209 ~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~~~~~~iGlIl--GTGt 255 (356)
+.+.+|.+..|+ +++.++|+.+|..++...........+|+ |-||
T Consensus 126 ~a~~~a~~~AGl--~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT 172 (509)
T 2v7y_A 126 QATKDAGRIAGL--EVERIINEPTAAALAYGLDKEEDQTILVYDLGGGT 172 (509)
T ss_dssp HHHHHHHHHTTC--EEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSC
T ss_pred HHHHHHHHHcCC--CeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCe
Confidence 566777777675 67899999999988765543333444554 4444
No 63
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=52.10 E-value=48 Score=31.04 Aligned_cols=32 Identities=19% Similarity=0.153 Sum_probs=24.9
Q ss_pred cHHHHHHHHHHHcCCCceEEEEEecchhhhhccc
Q 018393 206 DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGR 239 (356)
Q Consensus 206 dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~ 239 (356)
+.++.+.+++++.|+ ++..|+|..+|...+..
T Consensus 151 ~~v~~~~~~~~~aGl--~~~~i~~ep~Aaa~~~~ 182 (377)
T 2ych_A 151 EAVAGVLEALRGAGL--VPVVLDVKPFAGLYPLE 182 (377)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEEEHHHHTTGGGH
T ss_pred HHHHHHHHHHHHCCC--ceEEEecchHHHHHHHH
Confidence 456788888888775 56789999999887753
No 64
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=51.25 E-value=38 Score=34.10 Aligned_cols=75 Identities=20% Similarity=0.122 Sum_probs=44.9
Q ss_pred eeecccccCCCCCccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCcccc-ccC-chHHHHHHHHHHHHHHh
Q 018393 80 MLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLM-TGS-SHELFDYIAAALAKFVA 156 (356)
Q Consensus 80 MlPS~v~~lP~G~E~G~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~-~~~-~~~LFd~IA~~I~~fl~ 156 (356)
|=|.+.. |.-...-.|=|||+|-.++|..+++..+....+........++-+.+. ++. .++=.+-..+|+..|.+
T Consensus 2 ~~~~~~~--~~~~~~~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~ 78 (508)
T 3hi0_A 2 MTRSEAQ--GRLTGLAPVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHV 78 (508)
T ss_dssp --CCCCS--SSCTTCCCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred CCccccc--cccccCCeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHH
Confidence 4455533 222333468899999999999999986543333333333455655542 222 45666777777877754
No 65
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=49.25 E-value=11 Score=34.48 Aligned_cols=31 Identities=6% Similarity=0.074 Sum_probs=21.2
Q ss_pred EEEecchhhhhcccccCCCceEEEEeccccc
Q 018393 226 ALVNDTIGTLAGGRYHNKDAIAAVILGTGTN 256 (356)
Q Consensus 226 aivNDTVaTLla~~y~~~~~~iGlIlGTGtN 256 (356)
.++|+.+|...+..|..|++..-+=+|.+..
T Consensus 78 ~~v~Ei~ah~~ga~~~~~~~~~vidiGGqd~ 108 (270)
T 1hux_A 78 KQMSELSCHAMGASFIWPNVHTVIDIGGQDV 108 (270)
T ss_dssp EEECHHHHHHHHHHHHCTTCCEEEEEETTEE
T ss_pred CCcccHHHHHHHHHHhCCCCCEEEEECCCce
Confidence 3488888888777887777665455555444
No 66
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=47.15 E-value=15 Score=37.69 Aligned_cols=54 Identities=19% Similarity=0.153 Sum_probs=32.1
Q ss_pred HHHHHHHHHHcCCCceEEEEEecchhhhhcccccCC---CceEEEEecccccceeeccc
Q 018393 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK---DAIAAVILGTGTNAAYVERA 263 (356)
Q Consensus 208 ~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~~~---~~~iGlIlGTGtNacY~e~~ 263 (356)
.+.+++|.+..|+ +++.++|+.+|.-++...... ...+=+=+|-||--..+...
T Consensus 151 r~a~~~Aa~~AGl--~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~ 207 (605)
T 4b9q_A 151 RQATKDAGRIAGL--EVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEI 207 (605)
T ss_dssp HHHHHHHHHHTTC--EEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEE
T ss_pred HHHHHHHHHHcCC--ceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEE
Confidence 3445556666665 678899999999886644331 22222236777765554443
No 67
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=46.17 E-value=52 Score=30.89 Aligned_cols=62 Identities=11% Similarity=0.178 Sum_probs=38.3
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccc-cC-chHHHHHHHHHHHHHHhh
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMT-GS-SHELFDYIAAALAKFVAT 157 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~-~~-~~~LFd~IA~~I~~fl~~ 157 (356)
.|-+||+|-+++|+.+++..+.....+....+..++-+.+.. +. .++=.+-..+++.+|.+.
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~ 76 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKL 76 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHH
Confidence 688999999999999999964322223333334444444321 21 345556666777777653
No 68
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=44.30 E-value=23 Score=33.47 Aligned_cols=52 Identities=21% Similarity=0.255 Sum_probs=33.2
Q ss_pred ccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHH
Q 018393 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAK 153 (356)
Q Consensus 93 E~G~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~ 153 (356)
+.|.++.+|+||.++=++++++.+.. ++...+ -.+| . -++++.++|++.|..
T Consensus 188 ~~~~vlVvDIGgGTtDv~vi~~~~g~--~v~~~s--~~~~----l-Gg~~i~~~I~~~i~~ 239 (346)
T 2fsj_A 188 QPGYGVVIDVGSRTTDVLTINLMDME--PVVELS--FSLQ----I-GVGDAISALSRKIAK 239 (346)
T ss_dssp CSSEEEEEEECSSCEEEEEEETTTTE--ECGGGC--EEES----C-CHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCcEEEEEEEecCCE--EEeecC--CCcc----h-hHHHHHHHHHHHHHH
Confidence 45789999999999999999985421 111001 1122 1 256788888776543
No 69
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=43.76 E-value=34 Score=32.34 Aligned_cols=51 Identities=18% Similarity=0.223 Sum_probs=31.7
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHH
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKF 154 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~f 154 (356)
.++|+|-|.||||+-++. .| .+..+.. -|..++.....+|-.-+.+.+.++
T Consensus 7 ~~IavDWGTs~lRa~l~~-~g---~vl~~~~----~~~Gv~~~~~~~f~~~l~~~~~~w 57 (295)
T 3nuw_A 7 RYIAIDWGSTNLRAWLYQ-GE---ECLESRQ----SEAGVTRLNGRSPAAVLAEITQHW 57 (295)
T ss_dssp EEEEEEECSSCEEEEEEE-TT---EEEEEEE----ESCCTTCCTTCCHHHHHHHHTTTT
T ss_pred cEEEEEecchheeeeeec-CC---ceehhhc----CCCchhhcCcccHHHHHHHHHHHh
Confidence 589999999999999886 33 3444332 244444444444545555555555
No 70
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=37.03 E-value=87 Score=31.42 Aligned_cols=63 Identities=19% Similarity=0.223 Sum_probs=41.2
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccc-cC-chHHHHHHHHHHHHHHhhc
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMT-GS-SHELFDYIAAALAKFVATE 158 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~-~~-~~~LFd~IA~~I~~fl~~~ 158 (356)
.|=|||+|-.++|..+++..+....++.......++-+.+-. +. .++=.+-..+++..|.+..
T Consensus 12 ~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~ 76 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERL 76 (513)
T ss_dssp CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 588999999999999999964333333333334455555422 21 4567777778888886543
No 71
>3tai_A DNA double-strand break repair protein NURA; recombination, hydrolase; HET: DNA; 2.82A {Pyrococcus furiosus} PDB: 3tal_A* 3taz_A*
Probab=33.95 E-value=37 Score=34.00 Aligned_cols=48 Identities=15% Similarity=0.306 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccccCCCCCccccEEEEE
Q 018393 50 TPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALD 101 (356)
Q Consensus 50 ~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPS~v~~lP~G~E~G~fLalD 101 (356)
+|++.+++|.+-+.+++++-.+. -.+.|++++...+|+..+ ..+.|+|
T Consensus 24 is~~~~~~I~~~L~~~l~~~~~~---~~ie~i~~~W~elPe~~~-~~iaAVD 71 (471)
T 3tai_A 24 LSKQSIERITKILLDELENVREN---EQIRNIINSWKPLPSPEK-SSIYAVD 71 (471)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTC---SSHHHHHHTCBCCCCCCC-CEEEEEE
T ss_pred ccHhHHHHHHHHHHHHHHHHHhh---hchhhhhhhceECCCCCC-ceEEEec
Confidence 79999999999999999888866 268899999999997644 4788887
No 72
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=31.20 E-value=52 Score=31.60 Aligned_cols=53 Identities=17% Similarity=0.260 Sum_probs=32.0
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeEeeccCccccccCchHHHHHHHHHHHHHH
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFV 155 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~~~~~LFd~IA~~I~~fl 155 (356)
.++|+|=|.||||+-++.- ++ .+..+.. -+..++.....+|-+-+.+.+.++.
T Consensus 8 ~~IavDWGTSnlRa~l~~~--~g-~vl~~~~----~~~Gv~~~~~~~f~~~l~~l~~~w~ 60 (330)
T 3t69_A 8 YYAAVDWGTSSFRLWIIGE--DG-AVLAERR----SAEGMTTAAKTGFHTILDGHLAAVS 60 (330)
T ss_dssp CEEEEEECSSCEEEEEECT--TS-CEEEEEE----ESCCHHHHHHHCHHHHHHHHHHHTT
T ss_pred CEEEEEecchheehheecC--CC-Cchhhhc----CCcchhhcCcccHHHHHHHHHHHhh
Confidence 5999999999999988733 32 3443322 3444443333445555566666664
No 73
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=30.09 E-value=1e+02 Score=29.21 Aligned_cols=63 Identities=13% Similarity=0.163 Sum_probs=40.2
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcc-eeEEEEeEeeccCccccc-cC-chHHHHHHHHHHHHHHhhc
Q 018393 96 LFYALDLGGTNFRVLRVQLGGREG-RVVKQEFEEVSIPPHLMT-GS-SHELFDYIAAALAKFVATE 158 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~~~-~~~~~~~~~~~Ip~~~~~-~~-~~~LFd~IA~~I~~fl~~~ 158 (356)
.|-|||+|-.++|+.++++..++. .++.......++-+.+-. +. .++=.+-..+++.+|.+..
T Consensus 17 ~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~ 82 (343)
T 3cer_A 17 TVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVI 82 (343)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 488999999999999999963332 223223333444444421 22 4566777778888887654
No 74
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=29.93 E-value=1.2e+02 Score=25.71 Aligned_cols=22 Identities=18% Similarity=0.220 Sum_probs=18.9
Q ss_pred cEEEEEeCCceeEEEEEEEcCC
Q 018393 96 LFYALDLGGTNFRVLRVQLGGR 117 (356)
Q Consensus 96 ~fLalDlGGTnlRv~~V~L~g~ 117 (356)
+.|+||-|-++.=.++++..|+
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~ 23 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGR 23 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETT
T ss_pred EEEEEccCCCCeeEEEEEecCC
Confidence 3799999999999999987654
No 75
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=28.66 E-value=1.5e+02 Score=28.26 Aligned_cols=22 Identities=18% Similarity=0.176 Sum_probs=19.1
Q ss_pred ccEEEEEeCCceeEEEEEEEcC
Q 018393 95 GLFYALDLGGTNFRVLRVQLGG 116 (356)
Q Consensus 95 G~fLalDlGGTnlRv~~V~L~g 116 (356)
-.+.+||+|-+..|+.+.+...
T Consensus 3 ~~~avID~GSns~Rl~I~~~~~ 24 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSYDT 24 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEEEE
T ss_pred CEEEEEEcCCCCeEEEEEEEcC
Confidence 3578999999999999999864
No 76
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=28.27 E-value=1.6e+02 Score=30.00 Aligned_cols=23 Identities=22% Similarity=0.449 Sum_probs=20.2
Q ss_pred ccccEEEEEeCCceeEEEEEEEc
Q 018393 93 EKGLFYALDLGGTNFRVLRVQLG 115 (356)
Q Consensus 93 E~G~fLalDlGGTnlRv~~V~L~ 115 (356)
+...+|++|+||.++-|.++++.
T Consensus 186 ~~~~vlV~DlGGGT~Dvsi~~~~ 208 (605)
T 2kho_A 186 GNRTIAVYDLGGGTFDISIIEID 208 (605)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEEEEE
Confidence 34569999999999999999995
No 77
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=28.07 E-value=88 Score=23.53 Aligned_cols=36 Identities=8% Similarity=0.171 Sum_probs=31.3
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 018393 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (356)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (356)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 1mul_A 4 TQLIDVIAEKAELSKTQAKAALESTLAAITESLKEG 39 (90)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 466777777888999999999999999999999763
No 78
>1p71_A DNA-binding protein HU; protein-DNA complex, DNA bending, DNA binding protein-DN; 1.90A {Anabaena SP} SCOP: a.55.1.1 PDB: 1p51_A 1p78_A
Probab=27.72 E-value=94 Score=23.63 Aligned_cols=36 Identities=14% Similarity=0.127 Sum_probs=30.8
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 018393 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (356)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (356)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (94)
T 1p71_A 4 GELVDAVAEKASVTKKQADAVLTAALETIIEAVSSG 39 (94)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 456677777778999999999999999999999763
No 79
>1b8z_A Protein (histonelike protein HU); thermostable DNA binding protein; 1.60A {Thermotoga maritima} SCOP: a.55.1.1 PDB: 1riy_A
Probab=26.78 E-value=91 Score=23.41 Aligned_cols=36 Identities=14% Similarity=0.306 Sum_probs=30.9
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 018393 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (356)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (356)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 1b8z_A 4 KELIDRVAKKAGAKKKDVKLILDTILETITEALAKG 39 (90)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 456677777778999999999999999999999763
No 80
>3rhi_A DNA-binding protein HU; structural genomics, center for structural genom infectious diseases, csgid; 2.48A {Bacillus anthracis} SCOP: a.55.1.1 PDB: 1hue_A 1huu_A
Probab=26.48 E-value=95 Score=23.62 Aligned_cols=35 Identities=11% Similarity=0.202 Sum_probs=30.4
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 018393 39 AILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (356)
Q Consensus 39 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (356)
++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 8 eLi~~ia~~~~lsk~~~~~~v~~~~~~i~~~L~~g 42 (93)
T 3rhi_A 8 ELIKNVAQNAEISQKEATVVVQTVVESITNTLAAG 42 (93)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 56677777778999999999999999999999763
No 81
>2o97_B NS1, HU-1, DNA-binding protein HU-beta; heterodimer, DNA structure, DNA supercoiling, E DNA binding protein; 2.45A {Escherichia coli} SCOP: a.55.1.1
Probab=26.46 E-value=96 Score=23.37 Aligned_cols=36 Identities=8% Similarity=0.170 Sum_probs=30.4
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 018393 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (356)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (356)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 2o97_B 4 SQLIDKIAAGADISKAAAGRALDAIIASVTESLKEG 39 (90)
T ss_dssp HHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 466777778888999999999999999999999763
No 82
>3c4i_A DNA-binding protein HU homolog; dimerization by four helix bundle interaction, DNA condensat binding; 2.04A {Mycobacterium tuberculosis}
Probab=25.78 E-value=1e+02 Score=23.67 Aligned_cols=36 Identities=6% Similarity=0.152 Sum_probs=30.8
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 018393 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (356)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (356)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eLi~~ia~~~~lsk~~~~~~l~~~~~~i~~~L~~g 39 (99)
T 3c4i_A 4 AELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKG 39 (99)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 356677777778999999999999999999999763
No 83
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=25.61 E-value=1.3e+02 Score=30.55 Aligned_cols=24 Identities=21% Similarity=0.408 Sum_probs=20.5
Q ss_pred ccccEEEEEeCCceeEEEEEEEcC
Q 018393 93 EKGLFYALDLGGTNFRVLRVQLGG 116 (356)
Q Consensus 93 E~G~fLalDlGGTnlRv~~V~L~g 116 (356)
....+|.+|+||.++-+.++++.+
T Consensus 186 ~~~~vlV~DlGGGT~Dvsi~~~~~ 209 (605)
T 4b9q_A 186 GNRTIAVYDLGGGAFDISIIEIDE 209 (605)
T ss_dssp SSEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEEEEec
Confidence 345799999999999999999854
No 84
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=25.08 E-value=4.7e+02 Score=25.17 Aligned_cols=51 Identities=16% Similarity=0.079 Sum_probs=31.9
Q ss_pred cHHHHHHHHHHHcCCCceEEEEEecchhhhhcccccCC-CceEEEE-ecccccce
Q 018393 206 DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK-DAIAAVI-LGTGTNAA 258 (356)
Q Consensus 206 dv~~lL~~al~r~~l~v~v~aivNDTVaTLla~~y~~~-~~~iGlI-lGTGtNac 258 (356)
+.++.+.+++++.|+++ ..++|...|.-.+....+. +.-+.+| +|-||---
T Consensus 168 ~~v~n~~~~~~~AGL~v--~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdi 220 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSP--FQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGL 220 (419)
T ss_dssp HHHHHHHHHHHTTSCSC--EEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEE
T ss_pred HHHHHHHHHHHHcCCcE--EEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEE
Confidence 47788899999988665 5788998888655322211 1223444 66665443
No 85
>1owf_A IHF-alpha, integration HOST factor alpha-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ihf_A 1ouz_A 1owg_A 2ht0_A
Probab=23.59 E-value=1.1e+02 Score=23.48 Aligned_cols=36 Identities=11% Similarity=0.189 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 018393 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (356)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (356)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 6 ~eli~~ia~~~~ls~~~~~~vl~~~~~~i~~~L~~G 41 (99)
T 1owf_A 6 AEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENG 41 (99)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 466777777788999999999999999999999763
No 86
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=22.96 E-value=49 Score=21.59 Aligned_cols=30 Identities=30% Similarity=0.369 Sum_probs=24.8
Q ss_pred CCCCCceeeehhcccchHHHHHHHHHHHHH
Q 018393 307 LNPGEQIFEKIISGMYLGEIVRRVLCRMAE 336 (356)
Q Consensus 307 ~nPG~q~fEKmvSG~YLGEl~R~ill~l~~ 336 (356)
+||.+|+-|-=-...|+|-++=.++--+..
T Consensus 3 ~Npn~q~VELNRTSLy~GLLlifvlavlFs 32 (37)
T 3arc_L 3 PNPNRQPVELNRTSLYLGLLLILVLALLFS 32 (37)
T ss_dssp CCTTCCCBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcceechhhHHHHHHHHHHHHHHhh
Confidence 499999999999999999988777655443
No 87
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=22.41 E-value=2.4e+02 Score=26.02 Aligned_cols=28 Identities=25% Similarity=0.427 Sum_probs=21.9
Q ss_pred CCCCccccEEEEEeCCceeEEEEEEEcC
Q 018393 89 PTGDEKGLFYALDLGGTNFRVLRVQLGG 116 (356)
Q Consensus 89 P~G~E~G~fLalDlGGTnlRv~~V~L~g 116 (356)
..+.....++.+|+||.++-+.++++.+
T Consensus 200 ~~~~~~~~vlV~D~Gggt~dvsv~~~~~ 227 (394)
T 3qfu_A 200 DKSDKEHQIIVYDLGGGTFDVSLLSIEN 227 (394)
T ss_dssp TSCSSCEEEEEEEECSSCEEEEEEEEET
T ss_pred ccCCCCceEEEEEcCCCceeEEEEEEeC
Confidence 3333445789999999999999999854
No 88
>3g2b_A Coenzyme PQQ synthesis protein D; helix-turn-helix, PQQ biosynthesis, biosynthetic protein; 1.66A {Xanthomonas campestris PV}
Probab=21.06 E-value=1.5e+02 Score=22.82 Aligned_cols=33 Identities=9% Similarity=0.175 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Q 018393 36 RAVAILKEMEEKCGTPIGKLRQVADAMTVEMHA 68 (356)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~ 68 (356)
.+.+|++++...|..+.+.+..=+..|.+++.+
T Consensus 57 tv~eIv~~L~~~y~~~~e~i~~DV~~FL~~L~~ 89 (95)
T 3g2b_A 57 SLAQIAQTLAAEFDADASEIETDVIELTTTLHQ 89 (95)
T ss_dssp CHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 488999999999999988888777888888765
No 89
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=20.59 E-value=1.5e+02 Score=29.39 Aligned_cols=22 Identities=36% Similarity=0.611 Sum_probs=19.5
Q ss_pred cccEEEEEeCCceeEEEEEEEc
Q 018393 94 KGLFYALDLGGTNFRVLRVQLG 115 (356)
Q Consensus 94 ~G~fLalDlGGTnlRv~~V~L~ 115 (356)
...+|++|+||.++-+.++++.
T Consensus 160 ~~~vlV~D~GgGT~Dvsv~~~~ 181 (509)
T 2v7y_A 160 DQTILVYDLGGGTFDVSILELG 181 (509)
T ss_dssp SEEEEEEEECSSCEEEEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEEEEc
Confidence 3469999999999999999984
No 90
>1owf_B IHF-beta, integration HOST factor beta-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ouz_B 2ht0_B 1ihf_B 1owg_B
Probab=20.38 E-value=1.6e+02 Score=22.15 Aligned_cols=36 Identities=14% Similarity=0.269 Sum_probs=30.8
Q ss_pred HHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHhhcCC
Q 018393 38 VAILKEMEEK-CGTPIGKLRQVADAMTVEMHAGLASE 73 (356)
Q Consensus 38 ~~~l~~~~~~-~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (356)
.++++.+.+. ..++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~~ls~~~~~~~l~~~~~~i~~~L~~g 40 (94)
T 1owf_B 4 SELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQG 40 (94)
T ss_dssp HHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4677778777 48999999999999999999999763
Done!