Query 018395
Match_columns 356
No_of_seqs 242 out of 2100
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 14:35:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018395.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018395hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kgl_A Cruciferin; 11S SEED gl 100.0 2.5E-79 8.6E-84 605.7 39.0 349 4-354 11-453 (466)
2 3qac_A 11S globulin SEED stora 100.0 5E-79 1.7E-83 603.4 37.1 350 4-355 18-454 (465)
3 3ksc_A LEGA class, prolegumin; 100.0 1.4E-77 4.8E-82 597.2 40.7 350 4-355 14-489 (496)
4 3fz3_A Prunin; TREE NUT allerg 100.0 9.4E-77 3.2E-81 589.9 35.8 350 4-355 16-525 (531)
5 2e9q_A 11S globulin subunit be 100.0 2.6E-75 9E-80 579.6 37.1 348 4-353 31-451 (459)
6 1fxz_A Glycinin G1; proglycini 100.0 3.5E-71 1.2E-75 552.7 41.6 349 4-354 16-468 (476)
7 3c3v_A Arachin ARAH3 isoform; 100.0 1.2E-70 4.2E-75 549.6 38.7 349 4-354 16-502 (510)
8 2cav_A Protein (canavalin); vi 100.0 3.1E-70 1E-74 542.7 38.0 339 11-355 57-423 (445)
9 2d5f_A Glycinin A3B4 subunit; 100.0 5.2E-69 1.8E-73 538.6 35.1 346 3-354 12-493 (493)
10 1uij_A Beta subunit of beta co 100.0 6.6E-69 2.2E-73 530.1 33.9 340 9-354 18-393 (416)
11 2ea7_A 7S globulin-1; beta bar 100.0 4.5E-68 1.5E-72 526.0 37.4 339 10-354 31-409 (434)
12 3s7i_A Allergen ARA H 1, clone 100.0 7.8E-68 2.7E-72 520.4 32.3 338 8-351 12-415 (418)
13 2phl_A Phaseolin; plant SEED s 100.0 1.7E-65 5.8E-70 500.8 28.1 330 10-354 22-381 (397)
14 2vqa_A SLL1358 protein, MNCA; 100.0 2.3E-45 7.8E-50 356.8 36.0 318 15-351 32-357 (361)
15 1j58_A YVRK protein; cupin, de 100.0 2.6E-39 8.9E-44 316.9 31.6 310 15-345 59-375 (385)
16 1dgw_A Canavalin; duplicated s 100.0 3.7E-31 1.3E-35 232.6 18.2 161 9-172 10-178 (178)
17 3kgl_A Cruciferin; 11S SEED gl 100.0 5.2E-29 1.8E-33 246.4 19.3 157 9-172 295-453 (466)
18 3ksc_A LEGA class, prolegumin; 100.0 3.1E-28 1.1E-32 242.5 19.6 156 9-171 330-487 (496)
19 3s7i_A Allergen ARA H 1, clone 100.0 1.3E-28 4.6E-33 241.7 15.1 155 10-171 235-417 (418)
20 1dgw_A Canavalin; duplicated s 100.0 8E-28 2.7E-32 211.3 16.0 160 186-352 2-176 (178)
21 1uij_A Beta subunit of beta co 100.0 1E-27 3.6E-32 236.2 17.4 156 11-173 223-394 (416)
22 3qac_A 11S globulin SEED stora 100.0 1.2E-27 4E-32 236.7 17.1 157 8-171 294-452 (465)
23 2e9q_A 11S globulin subunit be 99.9 1.6E-27 5.4E-32 236.7 16.6 157 9-172 294-452 (459)
24 3fz3_A Prunin; TREE NUT allerg 99.9 3.8E-27 1.3E-31 234.4 16.9 155 9-170 366-522 (531)
25 2ea7_A 7S globulin-1; beta bar 99.9 4.3E-27 1.5E-31 232.7 16.6 158 10-174 239-411 (434)
26 2cav_A Protein (canavalin); vi 99.9 6.1E-27 2.1E-31 232.2 17.1 156 10-172 254-422 (445)
27 1fi2_A Oxalate oxidase, germin 99.9 5.7E-26 2E-30 203.2 18.3 163 180-345 28-197 (201)
28 3c3v_A Arachin ARAH3 isoform; 99.9 1.7E-25 5.8E-30 223.7 20.3 156 9-171 344-501 (510)
29 1fxz_A Glycinin G1; proglycini 99.9 2.5E-25 8.5E-30 222.0 21.2 155 10-171 311-467 (476)
30 2phl_A Phaseolin; plant SEED s 99.9 8.2E-26 2.8E-30 220.6 16.4 149 12-173 220-382 (397)
31 2d5f_A Glycinin A3B4 subunit; 99.9 5.1E-24 1.8E-28 213.2 16.0 151 9-169 339-491 (493)
32 2d40_A Z3393, putative gentisa 99.9 2.4E-23 8.1E-28 201.5 19.6 229 35-302 98-338 (354)
33 1dgw_X Canavalin; duplicated s 99.9 8.1E-24 2.8E-28 160.4 7.9 78 188-267 2-79 (79)
34 1fi2_A Oxalate oxidase, germin 99.9 1.4E-21 4.8E-26 174.6 16.9 141 15-163 50-197 (201)
35 1y3t_A Hypothetical protein YX 99.8 1.5E-19 5E-24 172.9 24.4 244 34-306 43-294 (337)
36 2vqa_A SLL1358 protein, MNCA; 99.8 2.5E-20 8.5E-25 180.5 15.6 154 187-346 20-174 (361)
37 1juh_A Quercetin 2,3-dioxygena 99.8 4.2E-19 1.4E-23 171.5 22.0 255 35-304 46-326 (350)
38 1rc6_A Hypothetical protein YL 99.8 2E-18 6.7E-23 160.2 21.2 195 34-304 56-255 (261)
39 3bu7_A Gentisate 1,2-dioxygena 99.8 4.4E-17 1.5E-21 158.6 28.1 231 34-302 120-367 (394)
40 1dgw_Y Canavalin; duplicated s 99.8 1.5E-18 5.1E-23 134.7 11.1 84 267-351 4-89 (93)
41 1sef_A Conserved hypothetical 99.8 3.9E-17 1.3E-21 152.5 21.5 193 34-303 59-257 (274)
42 3h7j_A Bacilysin biosynthesis 99.8 5.8E-17 2E-21 148.7 20.3 186 37-306 34-222 (243)
43 1j58_A YVRK protein; cupin, de 99.8 4.2E-18 1.4E-22 166.3 13.0 150 188-344 48-197 (385)
44 4e2q_A Ureidoglycine aminohydr 99.7 4.5E-16 1.5E-20 143.9 21.8 203 17-303 54-260 (266)
45 3rns_A Cupin 2 conserved barre 99.7 8.7E-16 3E-20 139.5 22.4 189 35-301 35-223 (227)
46 3nw4_A Gentisate 1,2-dioxygena 99.7 5.7E-16 2E-20 149.1 20.9 238 35-302 101-349 (368)
47 1sq4_A GLXB, glyoxylate-induce 99.7 1.3E-15 4.3E-20 142.6 21.1 198 34-306 65-268 (278)
48 1sfn_A Conserved hypothetical 99.6 8.6E-14 2.9E-18 127.8 23.7 194 34-305 47-241 (246)
49 1dgw_Y Canavalin; duplicated s 99.5 3.6E-14 1.2E-18 110.0 11.2 84 80-170 6-90 (93)
50 1dgw_X Canavalin; duplicated s 99.5 1.1E-14 3.7E-19 110.1 6.6 71 8-78 7-78 (79)
51 1lr5_A Auxin binding protein 1 99.4 4E-12 1.4E-16 109.0 13.9 143 4-158 11-158 (163)
52 3i7d_A Sugar phosphate isomera 99.3 8.2E-12 2.8E-16 107.5 11.2 98 12-117 21-122 (163)
53 3lag_A Uncharacterized protein 99.3 1.7E-12 5.8E-17 102.3 6.2 81 33-115 13-94 (98)
54 3l2h_A Putative sugar phosphat 99.3 1.5E-11 5E-16 105.3 12.4 79 34-117 43-124 (162)
55 2fqp_A Hypothetical protein BP 99.3 7E-12 2.4E-16 98.2 9.2 78 35-115 16-94 (97)
56 3ibm_A Cupin 2, conserved barr 99.3 2.7E-11 9.3E-16 104.6 13.7 79 34-117 53-132 (167)
57 3h8u_A Uncharacterized conserv 99.3 1E-11 3.5E-16 101.4 9.9 80 34-117 36-116 (125)
58 1v70_A Probable antibiotics sy 99.3 1.3E-11 4.5E-16 96.5 10.2 79 33-116 24-103 (105)
59 1o4t_A Putative oxalate decarb 99.3 3.6E-11 1.2E-15 99.7 12.3 78 33-115 53-131 (133)
60 2bnm_A Epoxidase; oxidoreducta 99.3 6.5E-11 2.2E-15 104.4 14.1 94 17-114 100-197 (198)
61 2gu9_A Tetracenomycin polyketi 99.3 4.4E-11 1.5E-15 95.1 11.5 80 33-117 17-99 (113)
62 2xlg_A SLL1785 protein, CUCA; 99.3 9.9E-12 3.4E-16 113.4 8.5 82 33-114 39-137 (239)
63 1x82_A Glucose-6-phosphate iso 99.2 9.2E-11 3.2E-15 103.4 14.1 83 35-117 65-156 (190)
64 3kgz_A Cupin 2 conserved barre 99.2 3.1E-11 1.1E-15 103.2 10.7 78 35-117 42-119 (156)
65 2oa2_A BH2720 protein; 1017534 99.2 4.8E-11 1.7E-15 100.7 11.3 83 35-117 41-125 (148)
66 3jzv_A Uncharacterized protein 99.2 3.6E-11 1.2E-15 103.8 10.7 78 35-117 51-128 (166)
67 2b8m_A Hypothetical protein MJ 99.2 5.1E-11 1.8E-15 96.1 10.8 77 35-116 25-102 (117)
68 3fjs_A Uncharacterized protein 99.2 3.7E-11 1.3E-15 97.1 9.8 76 33-113 32-107 (114)
69 2f4p_A Hypothetical protein TM 99.2 9.6E-11 3.3E-15 98.9 12.5 98 34-147 45-142 (147)
70 3ht1_A REMF protein; cupin fol 99.2 5E-11 1.7E-15 99.4 10.6 82 33-117 35-116 (145)
71 1vj2_A Novel manganese-contain 99.2 5E-11 1.7E-15 97.8 9.2 78 34-116 45-122 (126)
72 4e2g_A Cupin 2 conserved barre 99.2 7.2E-11 2.5E-15 96.3 9.8 77 34-116 38-114 (126)
73 2ozi_A Hypothetical protein RP 99.2 6.6E-11 2.2E-15 93.2 8.1 81 33-115 13-94 (98)
74 4i4a_A Similar to unknown prot 99.2 4.8E-10 1.6E-14 91.6 13.6 77 35-116 32-108 (128)
75 3es1_A Cupin 2, conserved barr 99.2 7.4E-11 2.5E-15 102.2 8.7 78 35-117 77-154 (172)
76 2vpv_A Protein MIF2, MIF2P; nu 99.1 1.8E-10 6.2E-15 99.0 10.1 74 36-114 87-162 (166)
77 1y9q_A Transcriptional regulat 99.1 2E-10 6.8E-15 100.9 10.4 79 33-117 100-180 (192)
78 3cew_A Uncharacterized cupin p 99.1 2.4E-10 8.1E-15 93.3 9.5 82 31-117 20-103 (125)
79 2o8q_A Hypothetical protein; c 99.1 4.6E-10 1.6E-14 92.6 11.3 73 39-116 45-118 (134)
80 1rc6_A Hypothetical protein YL 99.1 3.9E-10 1.3E-14 104.1 11.7 78 34-116 176-255 (261)
81 1yhf_A Hypothetical protein SP 99.1 5.6E-10 1.9E-14 89.4 10.9 76 34-116 37-112 (115)
82 1sef_A Conserved hypothetical 99.1 8.1E-10 2.8E-14 102.7 13.6 76 35-115 180-257 (274)
83 2pfw_A Cupin 2, conserved barr 99.1 4.2E-10 1.4E-14 90.3 10.0 74 36-116 33-106 (116)
84 3h8u_A Uncharacterized conserv 99.1 5.7E-10 1.9E-14 90.9 10.8 82 222-309 38-120 (125)
85 3lwc_A Uncharacterized protein 99.1 5.1E-10 1.7E-14 91.2 9.5 75 34-116 37-112 (119)
86 1lr5_A Auxin binding protein 1 99.1 6.8E-10 2.3E-14 95.0 10.0 146 188-340 8-158 (163)
87 2oa2_A BH2720 protein; 1017534 99.1 2E-09 6.7E-14 90.7 12.7 83 222-305 42-125 (148)
88 1sfn_A Conserved hypothetical 99.0 2.8E-09 9.7E-14 97.6 13.8 78 34-116 162-240 (246)
89 3h7j_A Bacilysin biosynthesis 99.0 6.6E-10 2.2E-14 101.5 9.4 78 35-117 143-221 (243)
90 2d40_A Z3393, putative gentisa 99.0 1.7E-09 5.9E-14 104.2 12.8 90 17-115 249-339 (354)
91 2ozj_A Cupin 2, conserved barr 99.0 1.5E-09 5.1E-14 87.0 10.4 75 35-116 36-110 (114)
92 4e2q_A Ureidoglycine aminohydr 99.0 3.5E-09 1.2E-13 97.7 14.0 77 34-115 183-260 (266)
93 2pyt_A Ethanolamine utilizatio 99.0 1.3E-09 4.3E-14 90.6 9.3 73 35-117 55-128 (133)
94 3bu7_A Gentisate 1,2-dioxygena 99.0 7E-09 2.4E-13 100.9 15.3 77 34-115 291-368 (394)
95 3myx_A Uncharacterized protein 99.0 2.5E-07 8.7E-12 83.8 24.5 183 35-291 45-227 (238)
96 2opk_A Hypothetical protein; p 99.0 2.3E-09 7.8E-14 86.2 9.8 79 33-115 27-109 (112)
97 1v70_A Probable antibiotics sy 99.0 5E-09 1.7E-13 81.5 11.3 75 222-303 27-102 (105)
98 4h7l_A Uncharacterized protein 99.0 3.2E-09 1.1E-13 90.1 10.4 89 14-117 28-119 (157)
99 1x82_A Glucose-6-phosphate iso 99.0 6.7E-09 2.3E-13 91.4 12.6 83 222-305 66-156 (190)
100 2q30_A Uncharacterized protein 98.9 3.5E-09 1.2E-13 83.7 9.6 76 34-115 30-107 (110)
101 3l2h_A Putative sugar phosphat 98.9 3E-09 1E-13 90.8 9.8 79 222-307 45-126 (162)
102 1y3t_A Hypothetical protein YX 98.9 1.4E-08 4.9E-13 96.4 14.3 72 39-116 219-292 (337)
103 2xlg_A SLL1785 protein, CUCA; 98.9 2.9E-09 9.9E-14 97.1 8.5 81 221-302 41-137 (239)
104 2gu9_A Tetracenomycin polyketi 98.9 1.4E-08 4.9E-13 80.3 11.4 77 222-305 20-99 (113)
105 4axo_A EUTQ, ethanolamine util 98.9 1.7E-08 5.9E-13 85.3 12.2 72 36-117 65-137 (151)
106 1sq4_A GLXB, glyoxylate-induce 98.9 6.3E-09 2.2E-13 97.0 10.5 79 34-117 188-267 (278)
107 3ibm_A Cupin 2, conserved barr 98.8 2E-08 6.9E-13 86.5 11.4 95 203-306 37-133 (167)
108 3rns_A Cupin 2 conserved barre 98.8 9.3E-09 3.2E-13 92.9 9.4 74 35-114 151-224 (227)
109 3lwc_A Uncharacterized protein 98.8 3E-08 1E-12 80.6 11.4 73 222-303 39-111 (119)
110 4e2g_A Cupin 2 conserved barre 98.8 3.3E-08 1.1E-12 80.3 11.6 77 222-306 40-116 (126)
111 3lag_A Uncharacterized protein 98.8 3.9E-09 1.3E-13 82.9 5.4 76 222-301 16-92 (98)
112 2fqp_A Hypothetical protein BP 98.8 9.3E-09 3.2E-13 80.1 7.5 76 222-302 17-93 (97)
113 4b29_A Dimethylsulfoniopropion 98.8 1.8E-08 6.1E-13 89.5 9.3 93 16-115 113-205 (217)
114 3i7d_A Sugar phosphate isomera 98.8 3.8E-08 1.3E-12 84.3 11.0 97 201-307 24-124 (163)
115 2i45_A Hypothetical protein; n 98.8 9.6E-09 3.3E-13 81.3 6.7 69 38-113 29-98 (107)
116 4i4a_A Similar to unknown prot 98.8 5.2E-08 1.8E-12 79.3 11.2 74 221-302 32-106 (128)
117 3kgz_A Cupin 2 conserved barre 98.8 2.6E-08 8.8E-13 84.9 9.6 78 221-306 42-120 (156)
118 3ht1_A REMF protein; cupin fol 98.8 3E-08 1E-12 82.3 9.6 81 222-308 38-119 (145)
119 2pfw_A Cupin 2, conserved barr 98.8 6.2E-08 2.1E-12 77.4 11.2 76 222-306 33-108 (116)
120 1o4t_A Putative oxalate decarb 98.8 5.7E-08 1.9E-12 80.2 11.1 74 222-302 56-130 (133)
121 3o14_A Anti-ecfsigma factor, C 98.8 7.7E-07 2.6E-11 80.1 19.4 168 36-299 42-209 (223)
122 2b8m_A Hypothetical protein MJ 98.8 4.7E-08 1.6E-12 78.4 10.4 73 222-302 26-100 (117)
123 2bnm_A Epoxidase; oxidoreducta 98.8 2.6E-07 8.7E-12 81.1 15.9 157 139-302 23-197 (198)
124 3jzv_A Uncharacterized protein 98.7 3.8E-08 1.3E-12 84.7 9.6 77 221-305 51-128 (166)
125 2o8q_A Hypothetical protein; c 98.7 4.6E-08 1.6E-12 80.4 9.7 76 225-307 45-121 (134)
126 2f4p_A Hypothetical protein TM 98.7 8.6E-08 2.9E-12 80.6 11.5 96 221-329 46-142 (147)
127 3cew_A Uncharacterized cupin p 98.7 4.9E-08 1.7E-12 79.4 9.6 80 220-306 23-104 (125)
128 1vr3_A Acireductone dioxygenas 98.7 1.2E-07 4.1E-12 83.1 12.5 79 38-116 75-163 (191)
129 3d82_A Cupin 2, conserved barr 98.7 6.6E-08 2.2E-12 75.1 8.4 68 37-113 31-99 (102)
130 1o5u_A Novel thermotoga mariti 98.7 2E-08 6.8E-13 79.3 5.4 67 37-109 31-97 (101)
131 3fjs_A Uncharacterized protein 98.7 1.6E-07 5.6E-12 75.4 10.9 63 222-292 35-97 (114)
132 1yhf_A Hypothetical protein SP 98.6 2.5E-07 8.6E-12 73.7 11.5 72 222-302 39-110 (115)
133 1vj2_A Novel manganese-contain 98.6 7.2E-08 2.5E-12 78.7 8.3 74 222-303 47-121 (126)
134 4h7l_A Uncharacterized protein 98.6 3.9E-07 1.3E-11 77.2 12.7 100 188-305 18-119 (157)
135 3st7_A Capsular polysaccharide 98.6 2E-07 6.8E-12 89.4 12.1 89 38-129 273-366 (369)
136 2q30_A Uncharacterized protein 98.6 2.3E-07 7.9E-12 73.0 10.3 74 222-302 32-106 (110)
137 3bcw_A Uncharacterized protein 98.6 5.2E-08 1.8E-12 79.7 6.1 67 35-106 47-113 (123)
138 3es1_A Cupin 2, conserved barr 98.6 1.7E-07 5.9E-12 81.0 8.8 79 222-308 78-157 (172)
139 1y9q_A Transcriptional regulat 98.5 4.6E-07 1.6E-11 79.2 10.4 147 139-304 24-179 (192)
140 1zrr_A E-2/E-2' protein; nicke 98.5 6.4E-08 2.2E-12 84.2 4.6 66 50-116 93-158 (179)
141 2ozi_A Hypothetical protein RP 98.5 1.7E-07 5.9E-12 73.4 6.6 77 222-302 16-93 (98)
142 2pyt_A Ethanolamine utilizatio 98.5 4.7E-07 1.6E-11 75.0 9.1 71 222-303 56-126 (133)
143 2vpv_A Protein MIF2, MIF2P; nu 98.5 6.9E-07 2.4E-11 76.6 10.2 72 223-301 88-161 (166)
144 2qnk_A 3-hydroxyanthranilate 3 98.5 2E-05 7E-10 72.1 20.4 63 42-106 36-99 (286)
145 3ebr_A Uncharacterized RMLC-li 98.5 1.2E-06 4E-11 74.8 11.4 73 36-115 41-115 (159)
146 2ozj_A Cupin 2, conserved barr 98.5 6.8E-07 2.3E-11 71.2 9.3 72 222-302 37-108 (114)
147 3nw4_A Gentisate 1,2-dioxygena 98.5 9.3E-07 3.2E-11 85.0 11.7 86 21-115 264-350 (368)
148 4axo_A EUTQ, ethanolamine util 98.4 3.6E-06 1.2E-10 71.0 12.6 87 204-305 51-137 (151)
149 2i45_A Hypothetical protein; n 98.4 4.7E-07 1.6E-11 71.4 6.4 70 225-302 30-99 (107)
150 3d82_A Cupin 2, conserved barr 98.4 7.3E-07 2.5E-11 69.1 7.3 60 234-301 40-99 (102)
151 2o1q_A Putative acetyl/propion 98.4 1.1E-06 3.7E-11 73.8 8.3 74 37-115 44-118 (145)
152 1yfu_A 3-hydroxyanthranilate-3 98.4 2.9E-06 1E-10 72.5 10.9 62 42-104 40-101 (174)
153 1juh_A Quercetin 2,3-dioxygena 98.4 2.3E-06 8E-11 82.1 11.7 81 222-306 47-131 (350)
154 2q1z_B Anti-sigma factor CHRR, 98.3 2.1E-06 7.3E-11 75.6 9.3 71 36-115 124-194 (195)
155 3cjx_A Protein of unknown func 98.3 2.3E-06 7.8E-11 73.4 8.5 74 36-115 42-117 (165)
156 1vr3_A Acireductone dioxygenas 98.3 8.3E-06 2.9E-10 71.4 11.8 79 224-305 75-164 (191)
157 2y0o_A Probable D-lyxose ketol 98.2 5.9E-06 2E-10 71.2 10.3 78 36-116 52-154 (175)
158 4b29_A Dimethylsulfoniopropion 98.2 8.6E-06 3E-10 72.3 10.3 92 202-302 113-204 (217)
159 1zvf_A 3-hydroxyanthranilate 3 98.2 7.6E-06 2.6E-10 69.8 9.4 65 42-106 39-106 (176)
160 2opk_A Hypothetical protein; p 98.2 8.9E-06 3E-10 64.9 9.3 75 222-302 30-108 (112)
161 2arc_A ARAC, arabinose operon 98.2 1.1E-05 3.9E-10 67.6 10.4 75 37-116 13-93 (164)
162 3eqe_A Putative cystein deoxyg 98.1 2.9E-05 9.9E-10 66.9 12.1 82 35-116 67-153 (171)
163 3d0j_A Uncharacterized protein 98.1 1.7E-05 5.7E-10 65.4 9.8 78 36-115 24-109 (140)
164 3d0j_A Uncharacterized protein 98.1 1.4E-05 4.8E-10 65.8 8.6 71 231-303 37-109 (140)
165 3st7_A Capsular polysaccharide 98.1 2.7E-05 9.2E-10 74.4 12.0 76 225-302 274-353 (369)
166 1yud_A Hypothetical protein SO 98.1 3.9E-05 1.3E-09 65.6 11.6 130 16-160 27-165 (170)
167 1zrr_A E-2/E-2' protein; nicke 98.0 3.7E-06 1.3E-10 73.0 4.4 67 235-305 92-159 (179)
168 1o5u_A Novel thermotoga mariti 98.0 1.7E-05 6E-10 62.2 7.8 60 223-291 31-90 (101)
169 3bcw_A Uncharacterized protein 97.9 2.2E-05 7.4E-10 64.0 7.2 63 222-292 48-110 (123)
170 2o1q_A Putative acetyl/propion 97.9 1.2E-05 4.1E-10 67.3 5.8 77 223-305 44-120 (145)
171 3ejk_A DTDP sugar isomerase; Y 97.9 0.00039 1.3E-08 59.9 15.0 101 13-115 30-141 (174)
172 2q1z_B Anti-sigma factor CHRR, 97.9 4.6E-05 1.6E-09 67.0 8.8 69 222-302 124-193 (195)
173 3es4_A Uncharacterized protein 97.8 0.00013 4.5E-09 58.6 10.3 64 35-103 40-103 (116)
174 3ebr_A Uncharacterized RMLC-li 97.8 7.5E-05 2.6E-09 63.5 9.4 72 222-303 41-115 (159)
175 2gm6_A Cysteine dioxygenase ty 97.8 0.00018 6.1E-09 63.9 12.2 81 35-115 77-166 (208)
176 3bal_A Acetylacetone-cleaving 97.7 0.00021 7.2E-09 60.2 10.3 65 35-102 44-108 (153)
177 2vec_A YHAK, pirin-like protei 97.7 0.011 3.7E-07 54.0 22.0 181 39-301 66-252 (256)
178 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.7 0.0011 3.8E-08 55.1 14.0 99 13-115 12-113 (141)
179 3eqe_A Putative cystein deoxyg 97.7 0.00052 1.8E-08 59.0 12.0 84 222-306 68-155 (171)
180 1yfu_A 3-hydroxyanthranilate-3 97.6 0.00019 6.5E-09 61.3 8.7 59 231-293 43-101 (174)
181 1zvf_A 3-hydroxyanthranilate 3 97.6 0.00033 1.1E-08 59.8 9.6 60 231-292 42-103 (176)
182 1tq5_A Protein YHHW; bicupin, 97.6 0.044 1.5E-06 49.5 25.1 206 14-302 11-227 (242)
183 3eln_A Cysteine dioxygenase ty 97.5 0.001 3.5E-08 58.6 12.6 78 36-113 69-156 (200)
184 3cjx_A Protein of unknown func 97.5 0.00025 8.5E-09 60.6 8.2 72 222-302 42-116 (165)
185 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.4 0.0023 7.8E-08 53.1 12.5 96 202-303 15-113 (141)
186 3bal_A Acetylacetone-cleaving 97.4 0.00027 9.2E-09 59.5 6.5 75 222-302 45-119 (153)
187 2qjv_A Uncharacterized IOLB-li 97.4 0.018 6.2E-07 52.7 19.0 209 17-303 12-246 (270)
188 3myx_A Uncharacterized protein 97.4 0.0013 4.4E-08 59.4 11.1 64 35-103 165-228 (238)
189 3ejk_A DTDP sugar isomerase; Y 97.4 0.0042 1.4E-07 53.4 13.7 72 230-302 60-140 (174)
190 2y0o_A Probable D-lyxose ketol 97.3 0.0012 4.1E-08 56.7 9.8 79 223-303 53-153 (175)
191 2arc_A ARAC, arabinose operon 97.3 0.001 3.6E-08 55.3 9.3 58 236-301 31-90 (164)
192 3o14_A Anti-ecfsigma factor, C 97.3 0.001 3.5E-08 59.6 9.5 68 222-302 42-109 (223)
193 3gbg_A TCP pilus virulence reg 97.2 0.0015 5E-08 59.7 9.5 77 35-114 5-85 (276)
194 2p17_A Pirin-like protein; GK1 97.1 0.15 5.3E-06 46.8 23.2 69 43-115 45-116 (277)
195 1yud_A Hypothetical protein SO 97.1 0.013 4.6E-07 49.9 14.3 131 202-342 27-165 (170)
196 2qnk_A 3-hydroxyanthranilate 3 97.1 0.0014 4.9E-08 59.9 8.6 66 231-301 39-104 (286)
197 2gm6_A Cysteine dioxygenase ty 97.1 0.0049 1.7E-07 54.5 11.6 79 223-303 79-166 (208)
198 3uss_A Putative uncharacterize 97.0 0.0049 1.7E-07 54.6 10.6 79 35-113 71-158 (211)
199 1vrb_A Putative asparaginyl hy 97.0 0.005 1.7E-07 58.6 11.3 73 42-114 145-252 (342)
200 3es4_A Uncharacterized protein 96.9 0.0011 3.7E-08 53.2 5.5 57 225-290 44-101 (116)
201 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.9 0.0059 2E-07 53.5 10.3 72 43-115 66-143 (197)
202 3eln_A Cysteine dioxygenase ty 96.8 0.021 7.1E-07 50.1 13.4 82 223-305 70-160 (200)
203 3ryk_A DTDP-4-dehydrorhamnose 96.8 0.012 4E-07 51.9 11.5 71 44-115 77-159 (205)
204 4gjz_A Lysine-specific demethy 96.8 0.0044 1.5E-07 54.8 8.9 66 40-105 126-226 (235)
205 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 96.8 0.015 5.2E-07 50.4 12.0 70 45-115 56-136 (185)
206 4gjz_A Lysine-specific demethy 96.8 0.0065 2.2E-07 53.7 9.7 66 226-293 126-225 (235)
207 2xdv_A MYC-induced nuclear ant 96.7 0.0076 2.6E-07 59.3 10.7 65 226-292 141-222 (442)
208 1wlt_A 176AA long hypothetical 96.7 0.015 5.2E-07 50.8 11.4 72 43-115 71-154 (196)
209 1vrb_A Putative asparaginyl hy 96.7 0.0063 2.1E-07 57.9 9.5 73 228-302 145-252 (342)
210 2ixk_A DTDP-4-dehydrorhamnose 96.7 0.02 6.9E-07 49.6 11.7 70 45-115 57-137 (184)
211 1oi6_A PCZA361.16; epimerase, 96.6 0.027 9.2E-07 49.6 12.4 70 45-115 55-136 (205)
212 3bb6_A Uncharacterized protein 96.5 0.013 4.4E-07 47.4 9.0 73 231-304 22-101 (127)
213 1dzr_A DTDP-4-dehydrorhamnose 96.5 0.045 1.6E-06 47.3 12.7 70 45-115 55-136 (183)
214 2c0z_A NOVW; isomerase, epimer 96.4 0.031 1E-06 49.6 11.7 70 45-115 63-144 (216)
215 1qwr_A Mannose-6-phosphate iso 96.4 0.019 6.3E-07 54.1 11.0 60 223-292 251-310 (319)
216 1upi_A DTDP-4-dehydrorhamnose 96.4 0.051 1.7E-06 48.4 13.1 72 43-115 72-155 (225)
217 3d8c_A Hypoxia-inducible facto 96.3 0.016 5.4E-07 55.3 9.4 73 228-302 187-296 (349)
218 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 96.3 0.032 1.1E-06 48.3 10.5 71 231-302 56-135 (185)
219 2wfp_A Mannose-6-phosphate iso 96.2 0.12 4.3E-06 49.9 15.6 59 223-291 324-382 (394)
220 2xdv_A MYC-induced nuclear ant 96.2 0.02 6.9E-07 56.3 9.8 64 41-104 142-223 (442)
221 1zx5_A Mannosephosphate isomer 96.1 0.07 2.4E-06 49.7 12.7 58 223-292 230-288 (300)
222 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.1 0.029 9.9E-07 49.1 9.4 69 231-302 68-142 (197)
223 4diq_A Lysine-specific demethy 96.1 0.022 7.4E-07 56.4 9.5 66 226-293 166-252 (489)
224 2ixk_A DTDP-4-dehydrorhamnose 96.0 0.043 1.5E-06 47.4 10.2 71 231-302 57-136 (184)
225 1pmi_A PMI, phosphomannose iso 96.0 0.42 1.4E-05 46.8 18.4 59 223-286 357-417 (440)
226 1dzr_A DTDP-4-dehydrorhamnose 96.0 0.051 1.7E-06 47.0 10.5 70 231-301 55-134 (183)
227 4hn1_A Putative 3-epimerase in 96.0 0.064 2.2E-06 46.9 11.1 70 45-115 52-133 (201)
228 3d8c_A Hypoxia-inducible facto 96.0 0.014 4.7E-07 55.7 7.5 64 42-105 187-286 (349)
229 3gbg_A TCP pilus virulence reg 95.9 0.025 8.6E-07 51.3 8.7 71 225-301 9-84 (276)
230 4diq_A Lysine-specific demethy 95.9 0.054 1.8E-06 53.6 11.3 75 41-115 167-263 (489)
231 3ryk_A DTDP-4-dehydrorhamnose 95.8 0.075 2.6E-06 46.7 11.0 71 231-301 78-157 (205)
232 1wlt_A 176AA long hypothetical 95.8 0.074 2.5E-06 46.4 10.6 72 231-302 73-153 (196)
233 1j1l_A Pirin; beta sandwich, c 95.7 1.3 4.3E-05 41.0 25.0 73 39-115 42-118 (290)
234 3al5_A HTYW5, JMJC domain-cont 95.7 0.041 1.4E-06 52.1 9.5 72 226-300 169-270 (338)
235 3m3i_A Putative uncharacterize 95.6 0.26 8.7E-06 43.6 13.3 129 16-160 34-210 (225)
236 1oi6_A PCZA361.16; epimerase, 95.5 0.11 3.9E-06 45.5 11.1 71 231-301 55-134 (205)
237 3loi_A Putative uncharacterize 95.5 0.43 1.5E-05 40.6 14.0 125 18-160 28-168 (172)
238 4hn1_A Putative 3-epimerase in 95.4 0.13 4.4E-06 45.0 11.0 72 231-302 52-132 (201)
239 3k2o_A Bifunctional arginine d 95.4 0.087 3E-06 49.9 10.5 68 227-294 175-281 (336)
240 3al5_A HTYW5, JMJC domain-cont 95.4 0.024 8.2E-07 53.7 6.6 65 41-105 170-265 (338)
241 2yu1_A JMJC domain-containing 95.1 0.074 2.5E-06 52.3 9.2 64 231-294 204-291 (451)
242 3loi_A Putative uncharacterize 95.0 0.56 1.9E-05 39.9 13.4 109 223-343 53-169 (172)
243 1upi_A DTDP-4-dehydrorhamnose 95.0 0.21 7.1E-06 44.5 11.0 71 231-301 74-153 (225)
244 1xe7_A YML079WP, hypothetical 95.0 0.28 9.5E-06 42.9 11.6 67 37-103 79-152 (203)
245 3kmh_A D-lyxose isomerase; cup 95.0 0.42 1.4E-05 42.6 12.8 83 35-117 104-210 (246)
246 2c0z_A NOVW; isomerase, epimer 94.9 0.18 6.3E-06 44.5 10.4 71 231-301 63-142 (216)
247 3kv5_D JMJC domain-containing 94.9 0.058 2E-06 53.7 7.8 65 228-292 270-359 (488)
248 3k3o_A PHF8, PHD finger protei 94.8 0.035 1.2E-06 53.2 5.9 67 228-294 151-242 (371)
249 3kv4_A PHD finger protein 8; e 94.8 0.09 3.1E-06 51.6 9.0 67 228-294 235-326 (447)
250 1xru_A 4-deoxy-L-threo-5-hexos 94.8 2 6.7E-05 39.3 17.1 76 223-302 180-262 (282)
251 3bb6_A Uncharacterized protein 94.6 0.14 4.9E-06 41.3 8.1 64 46-110 23-94 (127)
252 3kv4_A PHD finger protein 8; e 94.6 0.07 2.4E-06 52.4 7.5 62 45-106 239-327 (447)
253 3kv9_A JMJC domain-containing 94.5 0.088 3E-06 50.8 7.9 66 227-292 178-268 (397)
254 3kv5_D JMJC domain-containing 94.4 0.049 1.7E-06 54.2 6.1 61 45-105 274-361 (488)
255 3pua_A GRC5, PHD finger protei 94.4 0.055 1.9E-06 52.1 6.2 64 231-294 182-269 (392)
256 3k3o_A PHF8, PHD finger protei 94.1 0.061 2.1E-06 51.5 5.8 61 45-105 155-242 (371)
257 1znp_A Hypothetical protein AT 94.1 1.7 5.9E-05 36.1 13.8 108 16-131 20-136 (154)
258 3uss_A Putative uncharacterize 93.9 0.73 2.5E-05 40.5 12.0 79 223-303 73-160 (211)
259 3pua_A GRC5, PHD finger protei 93.9 0.079 2.7E-06 51.0 6.1 62 44-105 181-269 (392)
260 1e5r_A Proline oxidase; oxidor 93.9 0.088 3E-06 48.7 6.2 71 36-107 90-167 (290)
261 2yu1_A JMJC domain-containing 93.9 0.18 6.1E-06 49.6 8.7 62 45-106 204-292 (451)
262 2qjv_A Uncharacterized IOLB-li 93.8 0.26 8.8E-06 45.0 9.1 81 33-115 149-246 (270)
263 3kv9_A JMJC domain-containing 93.7 0.086 3E-06 50.9 6.1 64 42-105 179-270 (397)
264 1ywk_A 4-deoxy-L-threo-5-hexos 93.7 4.2 0.00014 37.3 18.5 57 41-102 61-119 (289)
265 3k2o_A Bifunctional arginine d 93.6 0.16 5.5E-06 48.0 7.8 65 41-105 175-281 (336)
266 3rcq_A Aspartyl/asparaginyl be 93.2 0.37 1.3E-05 42.0 8.7 72 38-115 103-180 (197)
267 3m3i_A Putative uncharacterize 93.1 3.3 0.00011 36.5 14.6 132 202-343 34-211 (225)
268 3pur_A Lysine-specific demethy 92.9 0.15 5.2E-06 50.7 6.5 64 43-106 302-392 (528)
269 3pur_A Lysine-specific demethy 92.9 0.22 7.7E-06 49.5 7.7 63 231-293 304-390 (528)
270 1eyb_A Homogentisate 1,2-dioxy 92.1 0.74 2.5E-05 45.0 10.0 204 52-288 172-398 (471)
271 1znp_A Hypothetical protein AT 91.9 3.4 0.00012 34.3 12.6 100 202-305 20-126 (154)
272 2oyz_A UPF0345 protein VPA0057 91.7 2 6.7E-05 32.7 9.9 69 37-113 23-92 (94)
273 1xe7_A YML079WP, hypothetical 91.0 7.3 0.00025 33.8 14.3 107 224-342 80-198 (203)
274 2vec_A YHAK, pirin-like protei 90.2 2.1 7.2E-05 38.7 10.6 70 227-302 68-141 (256)
275 1pmi_A PMI, phosphomannose iso 89.5 1.2 4.1E-05 43.6 9.0 66 36-103 356-423 (440)
276 1tq5_A Protein YHHW; bicupin, 89.0 4.2 0.00014 36.3 11.6 70 227-302 45-118 (242)
277 1j1l_A Pirin; beta sandwich, c 89.0 2.8 9.6E-05 38.6 10.7 77 34-115 166-243 (290)
278 2rg4_A Uncharacterized protein 88.2 1.8 6.1E-05 38.0 8.5 76 227-302 107-204 (216)
279 2p17_A Pirin-like protein; GK1 87.6 4 0.00014 37.3 10.7 72 34-114 164-241 (277)
280 1eyb_A Homogentisate 1,2-dioxy 87.4 2.7 9.2E-05 41.1 9.7 87 204-301 140-227 (471)
281 2qdr_A Uncharacterized protein 87.4 3.6 0.00012 37.1 9.7 69 36-113 90-159 (303)
282 3hqx_A UPF0345 protein aciad03 87.1 9.2 0.00032 29.8 10.9 69 39-113 39-108 (111)
283 3dl3_A Tellurite resistance pr 87.1 3.1 0.00011 33.0 8.3 61 47-107 26-91 (119)
284 2wfp_A Mannose-6-phosphate iso 86.5 1.6 5.4E-05 42.1 7.6 57 35-99 322-379 (394)
285 2pqq_A Putative transcriptiona 86.2 2.7 9.3E-05 33.0 7.9 53 225-279 28-80 (149)
286 3dl3_A Tellurite resistance pr 85.9 4.5 0.00015 32.1 8.6 70 234-304 27-99 (119)
287 1qwr_A Mannose-6-phosphate iso 85.4 1.5 5.1E-05 41.0 6.7 58 35-99 249-306 (319)
288 3eo6_A Protein of unknown func 83.9 4.4 0.00015 31.4 7.5 66 39-112 38-104 (106)
289 3dn7_A Cyclic nucleotide bindi 83.7 4.2 0.00015 33.7 8.3 75 225-302 30-110 (194)
290 2oz6_A Virulence factor regula 83.1 4.4 0.00015 33.9 8.2 54 225-280 13-66 (207)
291 3mdp_A Cyclic nucleotide-bindi 82.6 2.9 9.8E-05 32.6 6.4 54 225-280 29-85 (142)
292 4ev0_A Transcription regulator 82.6 4.8 0.00016 33.9 8.3 75 225-302 22-101 (216)
293 3kmh_A D-lyxose isomerase; cup 82.1 11 0.00038 33.5 10.3 79 223-302 106-207 (246)
294 3fx3_A Cyclic nucleotide-bindi 82.1 4.8 0.00016 34.6 8.3 53 225-279 34-86 (237)
295 2pqq_A Putative transcriptiona 81.6 2.9 9.9E-05 32.8 6.1 53 39-91 28-81 (149)
296 3ryp_A Catabolite gene activat 81.5 5.6 0.00019 33.3 8.3 75 225-302 19-99 (210)
297 2oyz_A UPF0345 protein VPA0057 81.4 8.3 0.00028 29.2 8.0 68 225-301 25-92 (94)
298 3iwz_A CAP-like, catabolite ac 81.0 5.6 0.00019 33.9 8.2 54 225-280 34-87 (230)
299 3la7_A Global nitrogen regulat 80.8 6.5 0.00022 34.1 8.7 55 223-279 41-95 (243)
300 1o5l_A Transcriptional regulat 80.7 4.8 0.00017 34.1 7.7 77 223-302 20-102 (213)
301 3gyd_A CNMP-BD protein, cyclic 80.7 5.7 0.0002 33.1 8.0 53 225-279 62-114 (187)
302 3mdp_A Cyclic nucleotide-bindi 80.6 2.6 8.9E-05 32.9 5.5 53 39-91 29-85 (142)
303 2z69_A DNR protein; beta barre 80.0 2.6 9E-05 33.3 5.4 53 225-279 35-87 (154)
304 1zyb_A Transcription regulator 79.8 4.8 0.00016 34.7 7.4 75 225-302 43-123 (232)
305 3b02_A Transcriptional regulat 79.2 6 0.00021 33.0 7.7 36 245-280 17-52 (195)
306 3d0s_A Transcriptional regulat 79.2 6.1 0.00021 33.7 7.9 75 225-302 29-108 (227)
307 3e6c_C CPRK, cyclic nucleotide 79.0 6.7 0.00023 34.1 8.2 76 224-302 31-108 (250)
308 3dv8_A Transcriptional regulat 79.0 7.6 0.00026 32.7 8.4 75 225-302 26-107 (220)
309 3dn7_A Cyclic nucleotide bindi 78.7 5 0.00017 33.3 7.0 52 40-91 31-83 (194)
310 3e97_A Transcriptional regulat 77.9 5.1 0.00017 34.3 7.0 54 225-280 29-82 (231)
311 3kcc_A Catabolite gene activat 77.4 8 0.00027 34.0 8.3 75 225-302 69-149 (260)
312 3idb_B CAMP-dependent protein 77.4 8.3 0.00028 30.9 7.8 52 225-279 61-112 (161)
313 1e5r_A Proline oxidase; oxidor 77.3 2.7 9.4E-05 38.6 5.1 72 224-299 92-172 (290)
314 2zcw_A TTHA1359, transcription 77.1 5.2 0.00018 33.5 6.7 72 227-301 7-84 (202)
315 4ev0_A Transcription regulator 77.1 5.6 0.00019 33.5 6.9 52 40-91 23-75 (216)
316 2oz6_A Virulence factor regula 77.1 6.5 0.00022 32.8 7.3 53 40-92 14-67 (207)
317 1ft9_A Carbon monoxide oxidati 77.1 18 0.00062 30.5 10.3 72 225-302 23-94 (222)
318 2z69_A DNR protein; beta barre 76.6 2.8 9.7E-05 33.1 4.6 52 39-90 35-87 (154)
319 2fmy_A COOA, carbon monoxide o 76.4 9.5 0.00032 32.3 8.2 72 225-302 27-98 (220)
320 1zx5_A Mannosephosphate isomer 76.3 5.2 0.00018 36.9 6.8 59 34-101 227-286 (300)
321 2gau_A Transcriptional regulat 76.1 5.1 0.00018 34.3 6.4 75 225-302 33-112 (232)
322 3fx3_A Cyclic nucleotide-bindi 75.5 5.9 0.0002 34.0 6.7 52 40-91 35-87 (237)
323 3ryp_A Catabolite gene activat 75.2 6.6 0.00022 32.9 6.8 52 40-91 20-72 (210)
324 1xru_A 4-deoxy-L-threo-5-hexos 74.5 9.4 0.00032 34.8 7.8 80 33-115 176-263 (282)
325 3gyd_A CNMP-BD protein, cyclic 74.5 6.3 0.00021 32.8 6.4 52 39-90 62-114 (187)
326 3iwz_A CAP-like, catabolite ac 74.1 8.2 0.00028 32.8 7.2 52 40-91 35-87 (230)
327 3d0s_A Transcriptional regulat 73.6 8.1 0.00028 32.8 7.1 52 40-91 30-82 (227)
328 3idb_B CAMP-dependent protein 73.6 7.4 0.00025 31.2 6.5 51 39-90 61-112 (161)
329 2rg4_A Uncharacterized protein 73.2 9.2 0.00032 33.3 7.3 65 38-102 104-191 (216)
330 3b02_A Transcriptional regulat 73.0 6.8 0.00023 32.6 6.3 50 43-92 3-53 (195)
331 3e97_A Transcriptional regulat 72.1 6.8 0.00023 33.5 6.2 53 39-91 29-82 (231)
332 1o5l_A Transcriptional regulat 71.9 5.7 0.00019 33.7 5.6 52 39-90 22-74 (213)
333 2ypd_A Probable JMJC domain-co 71.8 2.8 9.7E-05 40.0 3.8 26 80-105 293-318 (392)
334 3la7_A Global nitrogen regulat 71.3 9.1 0.00031 33.2 6.9 53 39-91 43-96 (243)
335 3rcq_A Aspartyl/asparaginyl be 70.9 24 0.00083 30.3 9.3 71 224-301 103-178 (197)
336 1zyb_A Transcription regulator 70.9 6.1 0.00021 34.0 5.6 53 39-91 43-96 (232)
337 3kcc_A Catabolite gene activat 70.7 9.2 0.00031 33.6 6.9 52 40-91 70-122 (260)
338 3dv8_A Transcriptional regulat 70.7 9.2 0.00031 32.2 6.7 51 40-90 27-78 (220)
339 2bgc_A PRFA; bacterial infecti 70.6 8.7 0.0003 33.1 6.6 73 40-113 19-98 (238)
340 2zcw_A TTHA1359, transcription 70.0 8.2 0.00028 32.3 6.2 71 41-113 7-84 (202)
341 3hqx_A UPF0345 protein aciad03 69.1 38 0.0013 26.3 10.6 71 225-302 39-109 (111)
342 2gau_A Transcriptional regulat 68.9 6.2 0.00021 33.8 5.2 53 39-91 33-86 (232)
343 3e6c_C CPRK, cyclic nucleotide 67.7 11 0.00038 32.6 6.7 53 39-91 32-85 (250)
344 4ava_A Lysine acetyltransferas 67.7 9.7 0.00033 34.7 6.6 52 39-90 36-87 (333)
345 1ft9_A Carbon monoxide oxidati 67.3 17 0.00057 30.8 7.7 70 39-113 23-93 (222)
346 2qdr_A Uncharacterized protein 67.2 30 0.001 31.2 9.1 81 204-302 78-160 (303)
347 2bgc_A PRFA; bacterial infecti 66.1 9.2 0.00031 33.0 5.8 75 225-302 18-99 (238)
348 2fmy_A COOA, carbon monoxide o 66.1 25 0.00084 29.6 8.5 70 39-113 27-97 (220)
349 3eo6_A Protein of unknown func 64.2 18 0.00062 27.9 6.3 67 225-300 38-104 (106)
350 2ptm_A Hyperpolarization-activ 63.8 12 0.00041 31.2 5.9 49 39-90 94-142 (198)
351 3dkw_A DNR protein; CRP-FNR, H 59.9 4.8 0.00016 34.2 2.7 54 225-280 32-85 (227)
352 3pna_A CAMP-dependent protein 59.4 21 0.00071 28.2 6.4 48 39-90 61-108 (154)
353 2xxz_A Lysine-specific demethy 59.2 5.8 0.0002 37.1 3.2 26 81-106 280-305 (332)
354 4f8a_A Potassium voltage-gated 58.5 22 0.00077 27.9 6.5 49 39-91 50-98 (160)
355 2qcs_B CAMP-dependent protein 58.1 19 0.00066 31.7 6.6 52 39-90 180-233 (291)
356 1ywk_A 4-deoxy-L-threo-5-hexos 57.5 28 0.00096 31.8 7.4 67 33-99 176-249 (289)
357 3bpz_A Potassium/sodium hyperp 56.8 19 0.00063 30.1 5.9 48 39-90 95-142 (202)
358 2d93_A RAP guanine nucleotide 55.3 14 0.00048 28.4 4.5 48 39-90 39-87 (134)
359 3ocp_A PRKG1 protein; serine/t 53.2 33 0.0011 26.3 6.5 48 39-90 46-93 (139)
360 1o7f_A CAMP-dependent RAP1 gua 53.0 23 0.0008 33.8 6.6 54 39-92 65-121 (469)
361 3dkw_A DNR protein; CRP-FNR, H 51.9 5.6 0.00019 33.8 1.7 54 39-92 32-86 (227)
362 3tnp_B CAMP-dependent protein 51.7 30 0.001 32.9 7.1 51 39-90 168-219 (416)
363 2qcs_B CAMP-dependent protein 50.7 54 0.0018 28.7 8.3 48 39-90 62-109 (291)
364 3shr_A CGMP-dependent protein 49.4 27 0.00091 31.0 6.0 51 40-90 181-233 (299)
365 3shr_A CGMP-dependent protein 47.4 22 0.00077 31.5 5.2 48 39-90 62-109 (299)
366 2ptm_A Hyperpolarization-activ 46.9 49 0.0017 27.2 7.0 51 223-279 92-142 (198)
367 1pcq_O Groes protein; chaperon 46.8 22 0.00074 27.0 4.1 53 231-288 21-74 (97)
368 3avr_A Lysine-specific demethy 46.6 12 0.0004 37.4 3.2 26 81-106 339-364 (531)
369 3g7d_A PHPD; non heme Fe(II) d 46.0 1.9E+02 0.0065 27.0 11.1 80 21-103 320-399 (443)
370 1vp6_A CNBD, cyclic-nucleotide 46.0 18 0.00063 27.6 3.8 45 40-90 35-79 (138)
371 4ava_A Lysine acetyltransferas 44.8 31 0.001 31.2 5.7 52 225-279 36-87 (333)
372 4ask_A Lysine-specific demethy 44.3 14 0.00046 36.6 3.2 25 81-105 314-338 (510)
373 1pcq_O Groes protein; chaperon 43.1 39 0.0013 25.6 5.0 48 46-96 22-71 (97)
374 3of1_A CAMP-dependent protein 42.4 36 0.0012 28.8 5.6 48 40-90 149-196 (246)
375 3tnp_B CAMP-dependent protein 42.2 70 0.0024 30.3 8.1 52 225-279 168-219 (416)
376 3ukn_A Novel protein similar t 41.5 38 0.0013 28.3 5.4 49 39-91 98-146 (212)
377 1wgp_A Probable cyclic nucleot 41.3 7.1 0.00024 30.1 0.6 49 41-90 31-82 (137)
378 1o7f_A CAMP-dependent RAP1 gua 40.9 61 0.0021 30.7 7.5 54 225-280 65-120 (469)
379 3bpz_A Potassium/sodium hyperp 39.3 71 0.0024 26.3 6.8 49 224-279 94-142 (202)
380 1wgp_A Probable cyclic nucleot 38.5 6.9 0.00023 30.2 0.1 34 245-279 47-82 (137)
381 3of1_A CAMP-dependent protein 38.0 34 0.0012 29.0 4.6 47 40-90 31-77 (246)
382 2d93_A RAP guanine nucleotide 36.4 65 0.0022 24.4 5.7 48 225-279 39-87 (134)
383 1yll_A PA5104, conserved hypot 31.7 84 0.0029 26.9 6.0 36 56-95 139-174 (200)
384 4f8a_A Potassium voltage-gated 31.3 1.5E+02 0.005 22.8 7.2 49 225-280 50-98 (160)
385 2b0t_A NADP isocitrate dehydro 30.9 47 0.0016 33.3 4.6 35 248-282 421-455 (738)
386 1itw_A Isocitrate dehydrogenas 30.9 47 0.0016 33.3 4.5 35 248-282 425-459 (741)
387 4din_B CAMP-dependent protein 30.7 55 0.0019 30.5 5.1 49 42-90 274-324 (381)
388 1p3h_A 10 kDa chaperonin; beta 30.6 92 0.0032 23.6 5.4 55 231-289 23-78 (99)
389 1we3_O CPN10(groes); chaperoni 30.6 66 0.0023 24.4 4.5 54 231-289 26-80 (100)
390 2ypd_A Probable JMJC domain-co 30.6 42 0.0014 32.0 4.1 26 268-293 292-317 (392)
391 3pna_A CAMP-dependent protein 30.2 1.7E+02 0.0057 22.6 7.4 48 225-279 61-108 (154)
392 3dkq_A PKHD-type hydroxylase S 28.2 85 0.0029 27.7 5.6 73 225-300 101-189 (243)
393 3ukn_A Novel protein similar t 22.1 1.8E+02 0.0062 23.9 6.4 51 223-280 96-146 (212)
394 1s4c_A Protein HI0227; double- 21.5 1.6E+02 0.0053 23.8 5.6 25 50-74 60-85 (155)
395 4din_B CAMP-dependent protein 20.9 85 0.0029 29.2 4.4 48 39-90 153-200 (381)
396 1xn7_A Hypothetical protein YH 20.8 59 0.002 23.3 2.5 33 139-171 16-49 (78)
No 1
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=100.00 E-value=2.5e-79 Score=605.65 Aligned_cols=349 Identities=24% Similarity=0.448 Sum_probs=321.3
Q ss_pred cCCCccccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCce----
Q 018395 4 DLTPKLAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEE---- 79 (356)
Q Consensus 4 dl~~~~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~---- 79 (356)
||+|.+|+.++++++|.++.|+..+ |.|++.++++++++|+||++.+||||++++++||++|+++++++.|+|.+
T Consensus 11 ~l~a~ep~~~~~se~G~~e~w~~~~-~~L~~~gvs~~r~~i~p~Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~ 89 (466)
T 3kgl_A 11 QLNALEPSHVLKAEAGRIEVWDHHA-PQLRCSGVSFVRYIIESKGLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQD 89 (466)
T ss_dssp CCCCBCCSEEEEETTEEEEECCTTS-HHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEE
T ss_pred cCCCCCCcceeeCCCcEEEEECCCC-hhhccCCeEEEEEEECCCCEeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhc
Confidence 8999999999999999999999876 89999999999999999999999999999999999999999999986533
Q ss_pred -------------------------------------------------------EEEEEcCCCEEEeCCCcEEEEEecC
Q 018395 80 -------------------------------------------------------KVVAIKKGDGIALPFGVVTWWYNKE 104 (356)
Q Consensus 80 -------------------------------------------------------~~~~l~~GDv~~iP~G~~H~~~N~g 104 (356)
++++|++||+++||+|++||++|+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g 169 (466)
T 3kgl_A 90 SSVFQPGGGSPFGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDG 169 (466)
T ss_dssp CCSSCCCC-----------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCC
Confidence 3459999999999999999999999
Q ss_pred CCcEEEEEEeeCCCCCC--CCceeEEeecccc----------------cccccCcHHHHHhhccCCHHHHHHhhcccC-C
Q 018395 105 DTELVVLFLGDTSKGHK--AGEFTNFFLTGAN----------------GIFTGFSTEFVSRAWDLDENTVKTLVGKQT-G 165 (356)
Q Consensus 105 ~e~l~~l~i~~~~~~~~--pg~~~~f~lag~~----------------s~l~~~~~~vl~~af~~~~~~~~~l~~~q~-~ 165 (356)
+++|+++|++++++..| ++.+++|||||+. |||++|++++|++|||++.++++||+++|+ .
T Consensus 170 ~e~L~~l~~~d~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~sGF~~e~La~Af~v~~e~~~kL~~~q~~~ 249 (466)
T 3kgl_A 170 NQPLVIVSVLDLASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILNGFTPEVLAKAFKIDVRTAQQLQNQQDNR 249 (466)
T ss_dssp SSCEEEEEEEESSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGGGSCHHHHHHHHTSCHHHHHHHTCTTCCS
T ss_pred CCcEEEEEEEcCCCcccccCCceeeeEecCCCccccccccccccccCCCccccCCHHHHHHHhCCCHHHHHHHhccccCc
Confidence 99999999999876554 4678999999986 999999999999999999999999998886 6
Q ss_pred ceEEEcCCCCcCCCCCccc------CC---------CceeeccC-CCCCcccCCCcEEEEeCCCCCCCccccCceeEEEE
Q 018395 166 KGIVKLDANAKLPEPKKEH------RD---------GMAFNCEE-APLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVR 229 (356)
Q Consensus 166 ~~iv~~~~~~~~~~p~~~~------~~---------~~~~~l~~-~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~ 229 (356)
+.||++++++..++|.... .+ .++|||.. .+++++++.||+++.+++.+||+|++|+||+++++
T Consensus 250 G~Iv~v~~~l~~~~p~~~~~~~~~~~~glee~~c~~r~~~Ni~~p~~~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~ 329 (466)
T 3kgl_A 250 GNIIRVQGPFSVIRPPLRSQRPQEEVNGLEETICSARCTDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGS 329 (466)
T ss_dssp CSEEECCSCCCCCCCCC--------------CCSSCCCEEETTCGGGEEEEETTTEEEEEECTTTCTTHHHHTCEEEEEE
T ss_pred eeEEEecCcccccCCcccccccccccCCccccccceeccccccCcccCCcccCCCceEEEechhhCcccccCceeeEEEE
Confidence 7999999777777664321 12 34789985 67777789999999999999999999999999999
Q ss_pred ecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEcCCCCce
Q 018395 230 LDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIF 309 (356)
Q Consensus 230 l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~~~~p~~ 309 (356)
|+||||++|||||+ |+||+||++|+++++||+++|+++|+++|++|||||||+|++|++++++++++|++|+++++|+.
T Consensus 330 L~pGgm~~PHwHp~-A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~ag~e~~~~l~~f~s~np~~ 408 (466)
T 3kgl_A 330 IRQNAMVLPQWNAN-ANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATSEQFRWIEFKTNANAQI 408 (466)
T ss_dssp EETTEEEEEEEESS-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEEESSSSCCE
T ss_pred eecCcEeeeeECCC-CCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeEEEEcCCCCEEEEEEECCCCCcc
Confidence 99999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEecCC
Q 018395 310 THLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANEAIFFPP 354 (356)
Q Consensus 310 ~~laG~~s~l~~~p~~vl~~af~~~~~~~~~l~~~~~~~~~~~~p 354 (356)
.+|+|+++||++||++||+++|+++.+++++|++++++++|+.|+
T Consensus 409 ~~LaG~~s~~~~lP~eVla~aF~v~~~~v~~Lk~~q~e~~i~~~~ 453 (466)
T 3kgl_A 409 NTLAGRTSVLRGLPLEVISNGYQISLEEARRVKFNTIETTLTHSS 453 (466)
T ss_dssp EESSSTTCTGGGSCHHHHHHHHTCCHHHHHHHHHSCCCSSEEECC
T ss_pred ccccchhhhhhhCCHHHHHHHhCcCHHHHHHHHhccCccEEECCC
Confidence 999999999999999999999999999999999999998888654
No 2
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=100.00 E-value=5e-79 Score=603.38 Aligned_cols=350 Identities=27% Similarity=0.505 Sum_probs=316.1
Q ss_pred cCCCccccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCc-----
Q 018395 4 DLTPKLAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKE----- 78 (356)
Q Consensus 4 dl~~~~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~----- 78 (356)
+|+|.+|+.++++++|.++.|+..+ +.|+|.++++++++|+||++.+||||+++|++||++|+++++++.++|.
T Consensus 18 ~l~a~eP~~~i~se~G~~e~~d~~~-~~l~~~gvs~~R~~i~P~gl~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~ 96 (465)
T 3qac_A 18 RLTALEPTNRIQAERGLTEVWDSNE-QEFRCAGVSVIRRTIEPHGLLLPSFTSAPELIYIEQGNGITGMMIPGCPETYES 96 (465)
T ss_dssp CCCCBCCCEEEEETTEEEEECCTTS-HHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCC--
T ss_pred cCCCCCCccceeCCCcEEEEECCCC-hhhcccceEEEEEEEcCCcCcccEEcCCCEEEEEEECcEEEEEecCCCCceeec
Confidence 7999999999999999999999766 6899999999999999999999999999999999999999999988753
Q ss_pred --------------------------------eEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCC---CC
Q 018395 79 --------------------------------EKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHK---AG 123 (356)
Q Consensus 79 --------------------------------~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~---pg 123 (356)
+++.+|++||+++||+|++||++|+|+++|++++++++++..| ++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~ 176 (465)
T 3qac_A 97 GSQQFQGGEDERIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKN 176 (465)
T ss_dssp ----------------------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSS
T ss_pred chhccccccccccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccc
Confidence 2356999999999999999999999999999999999886554 25
Q ss_pred ceeEEeeccc----------------------ccccccCcHHHHHhhccCCHHHHHHhhcccC-CceEEEcCCCCcCCCC
Q 018395 124 EFTNFFLTGA----------------------NGIFTGFSTEFVSRAWDLDENTVKTLVGKQT-GKGIVKLDANAKLPEP 180 (356)
Q Consensus 124 ~~~~f~lag~----------------------~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~-~~~iv~~~~~~~~~~p 180 (356)
.+++|||||+ .+||++|++++|++|||++.++++||+++|+ .+.||+++++++.++|
T Consensus 177 ~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~ni~sgF~~e~La~Af~v~~~~~~kl~~~q~~rG~Ivrv~~~l~~~~p 256 (465)
T 3qac_A 177 FPTRFYLAGKPQQEHSGEHQFSRESRRGERNTGNIFRGFETRLLAESFGVSEEIAQKLQAEQDDRGNIVRVQEGLHVIKP 256 (465)
T ss_dssp SCCEEESSSCCCCSCC--------------CCCCGGGGSCHHHHHHHHTCCHHHHHHHHTTTCCSCSEEEC-CCCC----
T ss_pred cceeEEecCCCccccccccccccccccccccccchhhcCCHHHHHHHhCCCHHHHHHhhhccccceeEEEecCcccccCC
Confidence 7899999997 4899999999999999999999999998876 5789999877666655
Q ss_pred Cccc-----------------------CCCceeeccC-CCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCee
Q 018395 181 KKEH-----------------------RDGMAFNCEE-APLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMC 236 (356)
Q Consensus 181 ~~~~-----------------------~~~~~~~l~~-~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~ 236 (356)
.... +..+++||.. .+++++++.||+++.+++.+||+|++||||+++++|+||||+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~nglee~~c~~~l~~ni~~p~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~ 336 (465)
T 3qac_A 257 PSRAWEEREQGSRGSRYLPNGVEETICSARLAVNVDDPSKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMM 336 (465)
T ss_dssp ------------------------CTTTSCCEEETTCTTTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEE
T ss_pred cccchhhhhcccccccccCCCccccccceeccccccccccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEe
Confidence 3210 1134678874 778888899999999999999999999999999999999999
Q ss_pred cccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEcCCCCceecccccc
Q 018395 237 SPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSI 316 (356)
Q Consensus 237 ~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~~~~p~~~~laG~~ 316 (356)
+|||||+ |+||+||++|+++++||+++|+++|+++|++|||||||+|++|++++++++++|++|+++++|+..+|||++
T Consensus 337 ~PHwHp~-A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h~~~ag~e~~~~l~f~~s~np~~~~LaG~~ 415 (465)
T 3qac_A 337 APHYNLN-AHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAIVKQAFEDGFEWVSFKTSENAMFQSLAGRT 415 (465)
T ss_dssp EEEEESS-CCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEESSTTCCEEESSSSS
T ss_pred eeEECCC-CCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEEEEEcCCCCeEEEEEecCCCCcccccccch
Confidence 9999999 999999999999999999999999999999999999999999999999889999999999999999999999
Q ss_pred ccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEecCCC
Q 018395 317 GTWKSLSPSVLEAAFNVPSDVEKQFRSKRANEAIFFPPP 355 (356)
Q Consensus 317 s~l~~~p~~vl~~af~~~~~~~~~l~~~~~~~~~~~~p~ 355 (356)
++|++||++||++||+++.+++++|++++++++++.|+.
T Consensus 416 sv~~~ip~eVla~aF~v~~e~v~~Lk~~~~e~~i~~~~~ 454 (465)
T 3qac_A 416 SAIRSLPIDVVSNIYQISREEAFGLKFNRPETTLFRSSG 454 (465)
T ss_dssp BHHHHSCHHHHHHHHTCCHHHHHHHHHSCCSCSEECCCC
T ss_pred hhhhhCCHHHHHHHhCCCHHHHHHHHhccCccEEECCcc
Confidence 999999999999999999999999999999998886654
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=100.00 E-value=1.4e-77 Score=597.20 Aligned_cols=350 Identities=25% Similarity=0.463 Sum_probs=319.3
Q ss_pred cCCCccccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCce----
Q 018395 4 DLTPKLAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEE---- 79 (356)
Q Consensus 4 dl~~~~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~---- 79 (356)
+|++.+|+.++++++|.++.|+. +.|.|++.++++++++|+||++.+||||+|++++||++|++.++++++++.+
T Consensus 14 ~L~a~eP~~~~~se~G~~e~~~~-~~~~L~~~gvs~~R~~i~pggl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~ 92 (496)
T 3ksc_A 14 RLDALEPDNRIESEGGLIETWNP-NNKQFRCAGVALSRATLQRNALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEE 92 (496)
T ss_dssp CCCCBCCSEEEEETTEEEEECCT-TSHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---
T ss_pred cCCcCCCccccCCCCcEEEeccc-cchhhccCCceEEEEEecCCCEeCceEcCCCEEEEEEeCceEEEEEeCCCCccchh
Confidence 78999999999999999999985 5699999999999999999999999999999999999999999999987432
Q ss_pred -----------------EEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCC--CCceeEEeeccc-------
Q 018395 80 -----------------KVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHK--AGEFTNFFLTGA------- 133 (356)
Q Consensus 80 -----------------~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~--pg~~~~f~lag~------- 133 (356)
++..|++||||+||+|++||++|+|+++|++++++++++..| ++.++.|||||+
T Consensus 93 ~~~~~~~~~~~~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~ 172 (496)
T 3ksc_A 93 PQESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQ 172 (496)
T ss_dssp ------------CCCCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGG
T ss_pred hhhcccccccccccchheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCcccccc
Confidence 256999999999999999999999999999999999876655 678899999998
Q ss_pred ---------------ccccccCcHHHHHhhccCCHHHHHHhh---cccCCceEEEcCCCCcCCCCCcc------------
Q 018395 134 ---------------NGIFTGFSTEFVSRAWDLDENTVKTLV---GKQTGKGIVKLDANAKLPEPKKE------------ 183 (356)
Q Consensus 134 ---------------~s~l~~~~~~vl~~af~~~~~~~~~l~---~~q~~~~iv~~~~~~~~~~p~~~------------ 183 (356)
.|+|++|++++|++|||++.++++||+ .+++.+.||+++++++.++|...
T Consensus 173 ~~~~~~~~~~~~~~~~ni~sgF~~e~La~Af~v~~e~~~kl~~~~~~~~rg~IV~v~~~l~~~~P~~~~~~~~~~~~~~~ 252 (496)
T 3ksc_A 173 YQHQQGGKQEQENEGNNIFSGFKRDFLEDAFNVNRHIVDRLQGRNEDEEKGAIVKVKGGLSIISPPEKQARHQRGSRQEE 252 (496)
T ss_dssp GCC-----------CCSGGGGSCHHHHHHHHTCCHHHHHHHTTTTCCTTTCSEEECSSCCCCCCCC--------------
T ss_pred ccccccccccccccCCCchhhcCHHHHHHHHCCCHHHHHHHHhhcccccCccEEEecCcccccCCchhhhchhhcccchh
Confidence 699999999999999999999999999 44567899999987665554210
Q ss_pred --------------------------------------------------------cCCC---------ceeeccC-CCC
Q 018395 184 --------------------------------------------------------HRDG---------MAFNCEE-APL 197 (356)
Q Consensus 184 --------------------------------------------------------~~~~---------~~~~l~~-~~~ 197 (356)
..++ +++||.. .++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nGlee~~c~~~l~~Ni~~p~~~ 332 (496)
T 3ksc_A 253 DEDEEKQPRHQRGSRQEEEEDEDEERQPRHQRRRGEEEEEDKKERGGSQKGKSRRQGDNGLEETVCTAKLRLNIGPSSSP 332 (496)
T ss_dssp ---------------------------------------------------------------CCSSSCCEEECSTTSCC
T ss_pred hhhccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCccccccchhhhccccccccC
Confidence 0122 3788884 678
Q ss_pred CcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCc
Q 018395 198 DVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGN 277 (356)
Q Consensus 198 ~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gd 277 (356)
+++++.||+++.+++.+||+|++||||+++++|+||||++|||||+ |+||+||++|+++++||+++|+++|+++|++||
T Consensus 333 di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~-A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GD 411 (496)
T 3ksc_A 333 DIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLN-ANSIIYALKGRARLQVVNCNGNTVFDGELEAGR 411 (496)
T ss_dssp SEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESS-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTC
T ss_pred CcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCC-CCEEEEEEeceEEEEEEeCCCcEEEEEEecCCe
Confidence 8888999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred EEEEcCCcEEEEeeCCCCeEEEEEEcCCCCceeccccccccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEecCCC
Q 018395 278 LFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANEAIFFPPP 355 (356)
Q Consensus 278 v~vvP~g~~h~~~~~~~~~~~~~~~~~~~p~~~~laG~~s~l~~~p~~vl~~af~~~~~~~~~l~~~~~~~~~~~~p~ 355 (356)
|||||+|++|++++++++++|++|+++++|+..+|+|.++||++||++||+++|+++.+++++|++++++.+|+.+|.
T Consensus 412 V~v~P~G~~H~~~a~~e~~~~l~f~~s~np~~~~LaG~~sv~~~~p~eVLa~aF~v~~~~v~~Lk~~q~e~~i~~~~~ 489 (496)
T 3ksc_A 412 ALTVPQNYAVAAKSLSDRFSYVAFKTNDRAGIARLAGTSSVINNLPLDVVAATFNLQRNEARQLKSNNPFKFLVPARE 489 (496)
T ss_dssp EEEECTTCEEEEEECSSEEEEEEEESSTTCCEEESSSTTCTTTTSCHHHHHHHHTCCHHHHHHHHHSCCCSSEECCCC
T ss_pred EEEECCCCEEEEEeCCCCEEEEEEECCCCCccccccchhhhhhhCCHHHHHHHHCcCHHHHHHHHhcCCccEEeCCCC
Confidence 999999999999998889999999999999999999999999999999999999999999999999999888886654
No 4
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=100.00 E-value=9.4e-77 Score=589.94 Aligned_cols=350 Identities=27% Similarity=0.519 Sum_probs=321.5
Q ss_pred cCCCccccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCc-----
Q 018395 4 DLTPKLAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKE----- 78 (356)
Q Consensus 4 dl~~~~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~----- 78 (356)
+|+|.+|+.++++++|.++.|+. ++|.|++.++++++++|.||++.+||||++.+++||++|++.+++|.|+|-
T Consensus 16 ~l~a~eP~~~i~se~G~~e~w~~-~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~a~el~yV~qG~g~~G~v~Pgcpet~~~ 94 (531)
T 3fz3_A 16 QLQAREPDNRIQAEAGQIETWNF-NQGDFQCAGVAASRITIQRNGLHLPSYSNAPQLIYIVQGRGVLGAVFSGCPETFEE 94 (531)
T ss_dssp CCCCBCCCEEEEETTEEEEECCT-TSHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEC
T ss_pred ccCcCCCchhcccCCceEEEeCC-CChhhccCcceEEEEEecCCCEeCCccCCCCeEEEEEECcEEEEEEcCCCcccccc
Confidence 68999999999999999999996 479999999999999999999999999999999999999999999998752
Q ss_pred ----------------------------------------------------------------------------eEEE
Q 018395 79 ----------------------------------------------------------------------------EKVV 82 (356)
Q Consensus 79 ----------------------------------------------------------------------------~~~~ 82 (356)
++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~ 174 (531)
T 3fz3_A 95 SQQSSQQGRQQEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTR 174 (531)
T ss_dssp CCC-------------------------------------------------------------------CCSCEESCCE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeee
Confidence 3468
Q ss_pred EEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCC--CCceeEEeeccc---------------------------
Q 018395 83 AIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHK--AGEFTNFFLTGA--------------------------- 133 (356)
Q Consensus 83 ~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~--pg~~~~f~lag~--------------------------- 133 (356)
.+++||++.||+|++||++|+|+++|++++++|+++..| ++.++.|||||+
T Consensus 175 ~vr~GDviaiPaG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (531)
T 3fz3_A 175 RIREGDVVAIPAGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQ 254 (531)
T ss_dssp EEETTEEEEECTTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC--------------------
T ss_pred cccCCcEEEECCCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccc
Confidence 899999999999999999999999999999999987776 788999999997
Q ss_pred --------------ccccccCcHHHHHhhccCCHHHHHHhhcccC-CceEEEcCCCCcCCCCCcc---------------
Q 018395 134 --------------NGIFTGFSTEFVSRAWDLDENTVKTLVGKQT-GKGIVKLDANAKLPEPKKE--------------- 183 (356)
Q Consensus 134 --------------~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~-~~~iv~~~~~~~~~~p~~~--------------- 183 (356)
.++|++|+.++|++|||++.++++||+++++ .+.|||+++++++++|...
T Consensus 255 ~~~~~~~~~~~~~~~nifsGFs~e~La~A~~v~~~~a~kLq~~~~~rg~IVrv~~~l~~~~P~~~~~~~~~~~~~~~~~~ 334 (531)
T 3fz3_A 255 PFGRPRQQEQQGNGNNVFSGFNTQLLAQALNVNEETARNLQGQNDNRNQIIQVRGNLDFVQPPRGRQEREHEERQQEQLQ 334 (531)
T ss_dssp ------------CCSSGGGGSCHHHHHHHHTSCHHHHHHHHTSSCCSCSEEECSSSCCCSCCC-----------------
T ss_pred cccccchhhhcccCCCeeecCCHHHHHHHHCCCHHHHHHHhcccccCceEEEecCCCcccCCchhhhhhhhccccccccc
Confidence 3799999999999999999999999998876 6899999988887776431
Q ss_pred ----------cCCC---------ceeeccC-CCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeeccccccc
Q 018395 184 ----------HRDG---------MAFNCEE-APLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCD 243 (356)
Q Consensus 184 ----------~~~~---------~~~~l~~-~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~ 243 (356)
..++ ++|||.. ..++++++.||+++.+++.+||+|++|+||+++++|+||||++|||||+
T Consensus 335 ~~~~~~~~~~~~nGleet~c~~rl~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~ 414 (531)
T 3fz3_A 335 QERQQQGEQLMANGLEETFCSLRLKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVN 414 (531)
T ss_dssp -------------CGGGTGGGCCCEEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESS
T ss_pred ccccccccccCCCCcccccccceeeeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCC
Confidence 0133 3899993 6667778999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEcCCCCceeccccccccccCCC
Q 018395 244 SALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLS 323 (356)
Q Consensus 244 ~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~~~~p~~~~laG~~s~l~~~p 323 (356)
|+||+||++|+++++|++++|+++++.+|++|||||||+|++|++++++++++|++|.++++|++.+|+|++++|++||
T Consensus 415 -A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~~ag~e~l~flaF~ss~np~~~~LaG~~svf~~lP 493 (531)
T 3fz3_A 415 -AHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAGNQGFEYFAFKTEENAFINTLAGRTSFLRALP 493 (531)
T ss_dssp -CCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEESSTTCCEEESSSTTCHHHHSC
T ss_pred -CCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEEEecCCCCEEEEEEecCCCCcceeccchhHHHHhCC
Confidence 9999999999999999999999999999999999999999999999888899999998889999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHhcCCCeEEecCCC
Q 018395 324 PSVLEAAFNVPSDVEKQFRSKRANEAIFFPPP 355 (356)
Q Consensus 324 ~~vl~~af~~~~~~~~~l~~~~~~~~~~~~p~ 355 (356)
++||+++|+++.+++++|++++++++||.||.
T Consensus 494 ~eVLa~aF~v~~e~v~kLk~~~~es~i~~pp~ 525 (531)
T 3fz3_A 494 DEVLANAYQISREQARQLKYNRQETIALSSSQ 525 (531)
T ss_dssp HHHHHHHHTCCHHHHHHHHHSCCCSSEECC--
T ss_pred HHHHHHHhCcCHHHHHHHHhcCCCceEECCCC
Confidence 99999999999999999999999999999886
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=100.00 E-value=2.6e-75 Score=579.59 Aligned_cols=348 Identities=26% Similarity=0.511 Sum_probs=313.8
Q ss_pred cCCCccccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCce----
Q 018395 4 DLTPKLAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEE---- 79 (356)
Q Consensus 4 dl~~~~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~---- 79 (356)
+|++.+|+.++++++|.++.|+..+ |.|+|.++++++++|+||++++||||+++|++||++|++++++++++|.+
T Consensus 31 ~l~a~eP~~~v~se~G~~~~~~~~~-~~l~~~gvs~~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~ 109 (459)
T 2e9q_A 31 NLRAQDPVRRAEAEAGFTEVWDQDN-DEFQCAGVNMIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQT 109 (459)
T ss_dssp SCCCBCCCEEEEETTEEEEECCTTS-HHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEE
T ss_pred cCCcCCCCceEecCCcEEEecCCCC-hhhccCceEEEEEEEcCCCEecceecCCceEEEEEeeEEEEEEEeCCCcchhcc
Confidence 7999999999999999999998755 99999999999999999999999999999999999999999999988642
Q ss_pred -----------------EEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCC--CceeEEeeccc-------
Q 018395 80 -----------------KVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKA--GEFTNFFLTGA------- 133 (356)
Q Consensus 80 -----------------~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~p--g~~~~f~lag~------- 133 (356)
++++|++||+++||+|++||++|+|+++|+++|++++++..|+ +.+.+|||||.
T Consensus 110 ~~~~~~~~~~~~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~ 189 (459)
T 2e9q_A 110 DLRRSQSAGSAFKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERG 189 (459)
T ss_dssp CCC-------CCCEEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSST
T ss_pred chhhccccccccccccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchh
Confidence 3579999999999999999999999999999999998765553 56889999985
Q ss_pred -----------------ccccccCcHHHHHhhccCCHHHHHHhhcccC-CceEEEcCCCCcCCCCCcc--c---------
Q 018395 134 -----------------NGIFTGFSTEFVSRAWDLDENTVKTLVGKQT-GKGIVKLDANAKLPEPKKE--H--------- 184 (356)
Q Consensus 134 -----------------~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~-~~~iv~~~~~~~~~~p~~~--~--------- 184 (356)
.+||++||+++|++||+++.+++++|+++++ .++||+++++++...|... .
T Consensus 190 ~~~~~~~~~~~~~~~~~~nif~gf~~evLa~aF~v~~~~v~kL~~~~~~~G~Iv~~~~~l~~~~P~~~~~e~~~~~~~~~ 269 (459)
T 2e9q_A 190 VEEWERSSRKGSSGEKSGNIFSGFADEFLEEAFQIDGGLVRKLKGEDDERDRIVQVDEDFEVLLPEKDEEERSRGRYIES 269 (459)
T ss_dssp TCC------------CCCCTTTTSCHHHHHHHHTCCHHHHHHHHTTTCCSTTEEECCSSCCTTTTC--------------
T ss_pred hhccccccccccccccccchhhcCCHHHHHhhcCCCHHHHHhhhhcccCCccEEEeCCcccccCCccchhhhcccccccc
Confidence 3899999999999999999999999998876 5799999977665544210 0
Q ss_pred ----CC---------CceeeccC-CCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEE
Q 018395 185 ----RD---------GMAFNCEE-APLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTY 250 (356)
Q Consensus 185 ----~~---------~~~~~l~~-~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~ 250 (356)
.+ .+.+|+.. ..++++++.||+++.+++.+||+|++|+||+++++|.||||++|||||+ |+||+|
T Consensus 270 ~~~~~~g~~e~~~~~~l~~n~~~~~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~-A~Ei~y 348 (459)
T 2e9q_A 270 ESESENGLEETICTLRLKQNIGRSERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVN-SHSVMY 348 (459)
T ss_dssp ----------CGGGSCCEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESS-CCEEEE
T ss_pred cccccCCccccccceeeeecccccccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCC-CCEEEE
Confidence 01 24566663 6667678999999999999999999999999999999999999999999 999999
Q ss_pred EEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEcCCCCceeccccccccccCCCHHHHHHH
Q 018395 251 IVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAA 330 (356)
Q Consensus 251 v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~~~~p~~~~laG~~s~l~~~p~~vl~~a 330 (356)
|++|+++++|++++|+++|+++|++|||||||+|++|++.|++++++|++++++++|+..+|+|+++||++||++||+++
T Consensus 349 V~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H~~~ng~~~~~~l~~~~s~~~~~~~laG~~s~~~~~p~~Vla~a 428 (459)
T 2e9q_A 349 ATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRASDRGFEWIAFKTNDNAITNLLAGRVSQMRMLPLGVLSNM 428 (459)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEESSSSCCEEESSSSSSHHHHSCHHHHHHH
T ss_pred EEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEEEEEeCCCCeEEEEEecCCCCcceeecchhHHHHhCCHHHHHHH
Confidence 99999999999999999999999999999999999999988888999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHhcCCCeEEecC
Q 018395 331 FNVPSDVEKQFRSKRANEAIFFP 353 (356)
Q Consensus 331 f~~~~~~~~~l~~~~~~~~~~~~ 353 (356)
|+++.+++++|++++++..||.+
T Consensus 429 f~v~~~~v~~l~~~~~e~~i~~~ 451 (459)
T 2e9q_A 429 YRISREEAQRLKYGQQEMRVLSP 451 (459)
T ss_dssp HTCCHHHHHHHHHSCCSCSEECS
T ss_pred HCcCHHHHHHHHhcCCccEEeCC
Confidence 99999999999999888875543
No 6
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=100.00 E-value=3.5e-71 Score=552.74 Aligned_cols=349 Identities=26% Similarity=0.485 Sum_probs=312.6
Q ss_pred cCCCccccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCce----
Q 018395 4 DLTPKLAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEE---- 79 (356)
Q Consensus 4 dl~~~~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~---- 79 (356)
||++.+|+.++++++|.++.|+..+ |.|++.++++++++|+||++++||||+++|++||++|++++++++++|.+
T Consensus 16 ~l~a~~P~~~v~se~G~~e~~~~~~-~~l~~~gvs~~r~~l~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~ 94 (476)
T 1fxz_A 16 KLNALKPDNRIESEGGLIETWNPNN-KPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEE 94 (476)
T ss_dssp CCCCBCCSCEEEETTEEEEECCTTS-HHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---
T ss_pred cCCCCCCceEEecCCceEEeeCCCC-hhhccCceEEEEEEEcCCCEecceecCCceEEEEEecEEEEEEEcCCCcchhhc
Confidence 7999999999999999999999766 89999999999999999999999999999999999999999999988752
Q ss_pred ------------------EEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCC--CceeEEeeccc------
Q 018395 80 ------------------KVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKA--GEFTNFFLTGA------ 133 (356)
Q Consensus 80 ------------------~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~p--g~~~~f~lag~------ 133 (356)
++++|++||+++||+|++||++|+|+++|++++++++++..|+ +.+.+|||||.
T Consensus 95 ~~~~~~~~~~~~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~ 174 (476)
T 1fxz_A 95 PQQPQQRGQSSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFL 174 (476)
T ss_dssp ---------------CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTH
T ss_pred cccccccccccccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCcccccc
Confidence 4689999999999999999999999999999999998766663 67899999984
Q ss_pred ------------------------ccccccCcHHHHHhhccCCHHHHHHhhcccC---CceEEEcCCCCcCCCCCc---c
Q 018395 134 ------------------------NGIFTGFSTEFVSRAWDLDENTVKTLVGKQT---GKGIVKLDANAKLPEPKK---E 183 (356)
Q Consensus 134 ------------------------~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~---~~~iv~~~~~~~~~~p~~---~ 183 (356)
.+||++||+++|++||+++.+++++|+++++ .+.||+++++++.+.|.. .
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~if~gf~~~vLa~af~v~~~~~~kl~~~~~~~~~g~Iv~v~~~l~~~~P~~~~~e 254 (476)
T 1fxz_A 175 KYQQEQGGHQSQKGKHQQEEENEGGSILSGFTLEFLEHAFSVDKQIAKNLQGENEGEDKGAIVTVKGGLSVIKPPTDEQQ 254 (476)
T ss_dssp HHHC-------------------CCCGGGGSCHHHHHHHHTCCHHHHHHHSCC-----CCSEEECSSCCCCCCC------
T ss_pred ccccccccccccccccccccccccchhhhcCCHHHHHhhhCCCHHHHHhhhccccccccccEEEeCCcccccCCccchhh
Confidence 3899999999999999999999999998876 689999997765544420 0
Q ss_pred --------------c--------------------CCC---------ceeeccC-CCCCcccCCCcEEEEeCCCCCCCcc
Q 018395 184 --------------H--------------------RDG---------MAFNCEE-APLDVDIKNGGRVVLLNTKNLPLVG 219 (356)
Q Consensus 184 --------------~--------------------~~~---------~~~~l~~-~~~~~~~~~gG~~~~~~~~~~p~l~ 219 (356)
. .++ +.+|+.. ..++++++.||+++++++.+||+|+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~~e~~~~~~l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~ 334 (476)
T 1fxz_A 255 QRPQEEEEEEEDEKPQCKGKDKHCQRPRGSQSKSRRNGIDETICTMRLRHNIGQTSSPDIYNPQAGSVTTATSLDFPALS 334 (476)
T ss_dssp ------------------------------------------CTTCCCEEECSSSSCCSEEETTTEEEEEECTTTSGGGT
T ss_pred hccccchhhhhcccccccccccccccccccccccccCCccccccceeeeccccccccCCcccCCCeEEEEeccccCcccc
Confidence 0 122 4556663 5667778999999999999999999
Q ss_pred ccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEE
Q 018395 220 EVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWF 299 (356)
Q Consensus 220 ~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~ 299 (356)
++++++++++|.||+|++||||++ |+||.||++|+++++|++++|+++++.+|++|||+|||+|++|++.|++++++|+
T Consensus 335 ~l~is~~~v~l~pGa~~~pH~Hp~-a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng~~~l~~l 413 (476)
T 1fxz_A 335 WLRLSAEFGSLRKNAMFVPHYNLN-ANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYV 413 (476)
T ss_dssp TTTCCEEEEEECTTCEEEEEEETT-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSTTEEEE
T ss_pred cCcceEEEEEecCCceecceECCC-CCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeCCCCEEEE
Confidence 999999999999999999999999 9999999999999999999998999999999999999999999997788899999
Q ss_pred EEEcCCCCceeccccccccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEecCC
Q 018395 300 SIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANEAIFFPP 354 (356)
Q Consensus 300 ~~~~~~~p~~~~laG~~s~l~~~p~~vl~~af~~~~~~~~~l~~~~~~~~~~~~p 354 (356)
+|+++++|+..+|+|+++||++||++||+++|+++.+++++|++++++..||.||
T Consensus 414 ~f~~s~~p~~~~laG~~s~~~~~p~~Vla~af~~~~~~v~~l~~~~~e~~i~~p~ 468 (476)
T 1fxz_A 414 SFKTNDTPMIGTLAGANSLLNALPEEVIQHTFNLKSQQARQIKNNNPFKFLVPPQ 468 (476)
T ss_dssp EEESSSSCCEEESSSTTCTGGGSCHHHHHHHHTCCHHHHHHHHHSCCCSSEECCC
T ss_pred EEECCCCCceeEccchhHHHHhCCHHHHHHHhCcCHHHHHHHHhhCCCcEEeCCc
Confidence 9999999999999999999999999999999999999999999998877765444
No 7
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=100.00 E-value=1.2e-70 Score=549.57 Aligned_cols=349 Identities=25% Similarity=0.494 Sum_probs=310.2
Q ss_pred cCCCccccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCc-----
Q 018395 4 DLTPKLAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKE----- 78 (356)
Q Consensus 4 dl~~~~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~----- 78 (356)
||+|.+|+.++++++|.++.|+..+ |.|+|.++++++++|+||++.+||||++++++||++|+|+++++.++|.
T Consensus 16 ~l~a~~p~~~~~se~G~~e~~~~~~-~~l~~~gvs~~r~~i~p~gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~ 94 (510)
T 3c3v_A 16 RLNAQRPDNRIESEGGYIETWNPNN-QEFECAGVALSRLVLRRNALRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEE 94 (510)
T ss_dssp CCCCBCCCEEEEETTEEEEECCTTS-HHHHHHTCEEEEEEECTTEEEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEE
T ss_pred cCCCCCchhhhccCCceEEEeCCCC-cccccCcEEEEEEEECCCCCccceecCCCeEEEEEeCEEEEEEEeCCCcccccc
Confidence 7999999999999999999999866 9999999999999999999999999999999999999999999998762
Q ss_pred ------------------------------eEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCC--Ccee
Q 018395 79 ------------------------------EKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKA--GEFT 126 (356)
Q Consensus 79 ------------------------------~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~p--g~~~ 126 (356)
+++++|++||+++||+|++||++|+|+++|++|+++++++..+. ..+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r 174 (510)
T 3c3v_A 95 PAQQGRRYQSQRPPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPR 174 (510)
T ss_dssp ECCC--------------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCC
T ss_pred ccccccccccccccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccc
Confidence 13579999999999999999999999999999999998754442 2368
Q ss_pred EEeeccc----------------------------------------------------------ccccccCcHHHHHhh
Q 018395 127 NFFLTGA----------------------------------------------------------NGIFTGFSTEFVSRA 148 (356)
Q Consensus 127 ~f~lag~----------------------------------------------------------~s~l~~~~~~vl~~a 148 (356)
+|||||+ .+||++||+++|++|
T Consensus 175 ~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~sgF~~~~La~a 254 (510)
T 3c3v_A 175 RFNLAGNHEQEFLRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFSGFTPEFLAQA 254 (510)
T ss_dssp CEESSCCCCCTTGGGCC------------------------------------------------CCTGGGSCHHHHHHH
T ss_pred eeEecCCcccccchhhhccccccccccccccccccccccccccccccccccccccccccccccccccceecCCHHHHHHH
Confidence 9999982 379999999999999
Q ss_pred ccCC-HHHHHHhhcccC---CceEEEcCCCCcCCCCCcc-----------------------------cCCC--------
Q 018395 149 WDLD-ENTVKTLVGKQT---GKGIVKLDANAKLPEPKKE-----------------------------HRDG-------- 187 (356)
Q Consensus 149 f~~~-~~~~~~l~~~q~---~~~iv~~~~~~~~~~p~~~-----------------------------~~~~-------- 187 (356)
||++ .+++++|++.++ .+.||++++++...+|... ..++
T Consensus 255 f~v~~~~~~~~l~~~~~~~~~g~Iv~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~~e~~c~~ 334 (510)
T 3c3v_A 255 FQVDDRQIVQNLRGENESEEQGAIVTVRGGLRILSPDRKRGADEEEEYDEDEYEYDEEDRRRGRGSRGSGNGIEETICTA 334 (510)
T ss_dssp HTCCCHHHHHHHTTTTCCTTSCSEEECTTCCCCCCC-----------------------------------CTTTTGGGC
T ss_pred hCCCHHHHHHHhhccccccccccEEEeCCcccccCCchhccccchhhhhhhhccccccccccccccccccCCccccccce
Confidence 9999 999999998776 6899999876655444210 0022
Q ss_pred -ceeeccC-CCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCC
Q 018395 188 -MAFNCEE-APLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDG 265 (356)
Q Consensus 188 -~~~~l~~-~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g 265 (356)
+.+|+.. ..++++++.||+++++++.+||+|++++||+++++|.||+|++||||++ |+||+||++|+++++|++++|
T Consensus 335 ~l~~ni~~~~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~-a~Ei~yVl~G~~~v~vv~~~G 413 (510)
T 3c3v_A 335 TVKKNIGRNRSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTN-AHSIIYALRGRAHVQVVDSNG 413 (510)
T ss_dssp CCEEECSSCSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESS-CCEEEEEEESEEEEEEECTTS
T ss_pred eeeeccCccccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCC-CCEEEEEEeCEEEEEEEeCCC
Confidence 4566663 5667778999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred ceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEcCCCCceeccccccccccCCCHHHHHHHcCCCHHHHHHHHhcC
Q 018395 266 KRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKR 345 (356)
Q Consensus 266 ~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~~~~p~~~~laG~~s~l~~~p~~vl~~af~~~~~~~~~l~~~~ 345 (356)
+++++.+|++|||+|||+|++|++.|++++++|++|+++++|+..+|+|+++||++||++||+++|+++.+++++|++++
T Consensus 414 ~~~~~~~l~~GDv~viP~G~~H~~~Ng~e~l~~l~f~~s~~p~~~~LaG~~svf~~lp~eVla~aF~v~~e~v~~L~~~~ 493 (510)
T 3c3v_A 414 NRVYDEELQEGHVLVVPQNFAVAGKSQSDNFEYVAFKTDSRPSIANLAGENSVIDNLPEEVVANSYGLPREQARQLKNNN 493 (510)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEEESSSSCCEEESSSTTSTTTTSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CEEEeEEEcCCcEEEECCCCeEEEEeCCCCEEEEEEECCCCcceeecccHhHHHHhCCHHHHHHHHCcCHHHHHHHHhhC
Confidence 89999999999999999999999977878899999999999999999999999999999999999999999999999988
Q ss_pred CCeEEecCC
Q 018395 346 ANEAIFFPP 354 (356)
Q Consensus 346 ~~~~~~~~p 354 (356)
++..||.||
T Consensus 494 ~e~~i~~p~ 502 (510)
T 3c3v_A 494 PFKFFVPPS 502 (510)
T ss_dssp CCSSEECC-
T ss_pred CCcEEECCc
Confidence 877655443
No 8
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=100.00 E-value=3.1e-70 Score=542.70 Aligned_cols=339 Identities=17% Similarity=0.272 Sum_probs=296.3
Q ss_pred cceeeCCCeEEEEeCCC--CCCCcccCc-eEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCC
Q 018395 11 KQVYGGNGGSYHAWCPN--ELPMLRQGN-IGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKG 87 (356)
Q Consensus 11 ~~~~~~~~G~i~~~~~~--~~p~l~~~~-~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~G 87 (356)
++++++++|+++.++.. +.|.+++.+ +++++++|+||++.+||||+++|++||++|+++++++++++. .+++|++|
T Consensus 57 ~~~i~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~-~~~~l~~G 135 (445)
T 2cav_A 57 LTLFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQG 135 (445)
T ss_dssp EEEEEETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEE-EEEEEETT
T ss_pred CceEEcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCC-EEEEecCC
Confidence 45788899999997553 335788765 999999999999999997799999999999999999988765 67999999
Q ss_pred CEEEeCCCcEEEEEecC-CCcEEEEEEeeCCCCCCCCceeEEeecccc---cccccCcHHHHHhhccCCHHHHHHhhc-c
Q 018395 88 DGIALPFGVVTWWYNKE-DTELVVLFLGDTSKGHKAGEFTNFFLTGAN---GIFTGFSTEFVSRAWDLDENTVKTLVG-K 162 (356)
Q Consensus 88 Dv~~iP~G~~H~~~N~g-~e~l~~l~i~~~~~~~~pg~~~~f~lag~~---s~l~~~~~~vl~~af~~~~~~~~~l~~-~ 162 (356)
|++++|+|.+||++|+| +++++++++++++ ++||.+.+|||+|+. +||++||++||+++|+++.+++++|+. +
T Consensus 136 Dv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~--~~pg~~~~F~laG~~~~~~~~~~~~~~vLa~af~v~~~~v~~l~~~~ 213 (445)
T 2cav_A 136 DAIKIQAGTPFYLINPDNNQNLRILKFAITF--RRPGTVEDFFLSSTKRLPSYLSAFSKNFLEASYDSPYDEIEQTLLQE 213 (445)
T ss_dssp EEEEECTTCCEEEEECCSSCCEEEEEEEECC--SSTTCCCEEESSCCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHTTSC
T ss_pred CEEEECCCCcEEEEECCCCCCEEEEEEeccC--CCCCceeeeeccCCCchhhhhhcCCHHHHHHHhCCCHHHHHhhhccc
Confidence 99999999999999998 7899999999976 679899999999874 999999999999999999999999995 5
Q ss_pred cCCceEEEcCCCCcC---CCCCc-----ccCCCceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCC
Q 018395 163 QTGKGIVKLDANAKL---PEPKK-----EHRDGMAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKA 234 (356)
Q Consensus 163 q~~~~iv~~~~~~~~---~~p~~-----~~~~~~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~ 234 (356)
|++++|+++++++.. ..++. ......+|||.+++|++ ++++|+++.+++.+||+|+++|||+++++|+|||
T Consensus 214 ~~~g~Iv~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~p~~-~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~ 292 (445)
T 2cav_A 214 EQEGVIVKMPKDQIQEISKHAQSSSRKTLSSQDKPFNLRSRDPIY-SNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGA 292 (445)
T ss_dssp CSSSSEEECCCC--------------------CCCEETTSSCCSE-ESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTE
T ss_pred CCCCcEEEeCCcchhhhcccccccCCCCCCCcccceeccccCCCc-cCCCceEEEeChHHCcccccCCCceEEEEeeCCc
Confidence 567899999876431 11111 12235699999998876 6999999999999999999999999999999999
Q ss_pred eecccccccCCeeEEEEEeceEEEEEEccCCc--------e--EEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEcC
Q 018395 235 MCSPGFSCDSALQVTYIVRGSGRAQIVGPDGK--------R--VLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIITT 304 (356)
Q Consensus 235 ~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~--------~--~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~~ 304 (356)
|++|||||+ |+||+||++|+++++|++++|. + +++++|++|||||||||++|++.|+ ++++|++|.++
T Consensus 293 m~~PH~hp~-A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~-~~~~~v~f~~~ 370 (445)
T 2cav_A 293 LFVPHYNSR-ATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA-SDLNMVGIGVN 370 (445)
T ss_dssp EEEEEEESS-CEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCEEEEES-SSEEEEEEEES
T ss_pred eeeeEECCC-CcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC-CCeEEEEEEcc
Confidence 999999999 9999999999999999999853 4 7999999999999999999999887 78999998754
Q ss_pred C-CCceecccc-ccccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEecCCC
Q 018395 305 P-NPIFTHLAG-SIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANEAIFFPPP 355 (356)
Q Consensus 305 ~-~p~~~~laG-~~s~l~~~p~~vl~~af~~~~~~~~~l~~~~~~~~~~~~p~ 355 (356)
. +|..++||| ++++|++||++||+++|+++.+++++|++++++++++.+|.
T Consensus 371 ~~~~~~~~laG~~~sv~~~~p~~vla~af~v~~~~v~~l~~~~~e~~~~~~~~ 423 (445)
T 2cav_A 371 AENNERNFLAGHKENVIRQIPRQVSDLTFPGSGEEVEELLENQKESYFVDGQP 423 (445)
T ss_dssp CTTCCEEESSSSTTBSGGGSCHHHHHHHSSSCHHHHHHHHHHCCSCSEEECC-
T ss_pred CCCCCcEEcccchhhhhhhCCHHHHHHHHCcCHHHHHHHHhcCCccEEeCCch
Confidence 4 889999999 89999999999999999999999999999999998877653
No 9
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=100.00 E-value=5.2e-69 Score=538.64 Aligned_cols=346 Identities=26% Similarity=0.495 Sum_probs=309.4
Q ss_pred ccCCCccccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCc----
Q 018395 3 IDLTPKLAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKE---- 78 (356)
Q Consensus 3 ~dl~~~~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~---- 78 (356)
.+|++.+|+.++++++|.++.|+..+ |.|++.++++++++|+||++++||||++++|+||++|+|+++++.|+|.
T Consensus 12 ~~L~a~~P~~~~~se~G~~e~~~~~~-~~l~~~gv~~~r~~i~pggl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~ 90 (493)
T 2d5f_A 12 NNLNALEPDHRVESEGGLIETWNSQH-PELQCAGVTVSKRTLNRNGLHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFE 90 (493)
T ss_dssp SCCCCBCCCEEEECSSEEEEECCTTS-HHHHHHTCEEEEEEECTTEEEEEEECSSCEEEEEEECEEEEEECCTTCCCCEE
T ss_pred ccCCCCCCcceeecCCcEEEEeCCCC-hhhccCCEEEEEEEeCCCcEeCceecCCCeEEEEEeCEEEEEEEeCCCccccc
Confidence 58999999999999999999998755 8999999999999999999999999999999999999999999988752
Q ss_pred ---------------------eEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCC--CceeEEeeccc--
Q 018395 79 ---------------------EKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKA--GEFTNFFLTGA-- 133 (356)
Q Consensus 79 ---------------------~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~p--g~~~~f~lag~-- 133 (356)
+++++|++||+|+||+|++||++|+|+++|+++|++++++..|+ ..+.+|||||+
T Consensus 91 ~~~~~~~~~~~~~~~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~ 170 (493)
T 2d5f_A 91 KPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPD 170 (493)
T ss_dssp ECC-------------CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCC
T ss_pred cccccccccccccccccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCcc
Confidence 24689999999999999999999999999999999998766664 34689999983
Q ss_pred -------------------------------ccccccCcHHHHHhhccCCHHHHHHhhcccC-CceEEEcCCCCcCCCCC
Q 018395 134 -------------------------------NGIFTGFSTEFVSRAWDLDENTVKTLVGKQT-GKGIVKLDANAKLPEPK 181 (356)
Q Consensus 134 -------------------------------~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~-~~~iv~~~~~~~~~~p~ 181 (356)
.+||++|++++|++||+++.+++++|++.++ .+.||++++++..+.|.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nif~gf~~e~La~aF~v~~~~v~kl~~~~~~~g~Iv~v~~~l~~~~P~ 250 (493)
T 2d5f_A 171 IEHPETMQQQQQQKSHGGRKQGQHQQQEEEGGSVLSGFSKHFLAQSFNTNEDTAEKLRSPDDERKQIVTVEGGLSVISPK 250 (493)
T ss_dssp CSCGGGTC---------------------CCCCGGGGSCHHHHHHHTTCCHHHHHHTTCTTCCSCSEEECTTCCCCCCSC
T ss_pred ccchhhhhhcccccccccccccccccccccccchhhcCCHHHHHhHhCCCHHHHHHhhhcccCcccEEEeCCCccccCCc
Confidence 4899999999999999999999999998877 57899998775433331
Q ss_pred c------c------------------------------------c-----------------------CCC---------
Q 018395 182 K------E------------------------------------H-----------------------RDG--------- 187 (356)
Q Consensus 182 ~------~------------------------------------~-----------------------~~~--------- 187 (356)
. . . .++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~ee~~~~~~ 330 (493)
T 2d5f_A 251 WQEQEDEDEDEDEEYEQTPSYPPRRPSHGKHEDDEDEDEEEDQPRPDHPPQRPSRPEQQEPRGRGCQTRNGVEENICTMK 330 (493)
T ss_dssp C---------------------------------------------------------------------CTTTTGGGCC
T ss_pred hhhhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccccccccccccCCcccccccee
Confidence 0 0 0 022
Q ss_pred ceeeccC-CCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCc
Q 018395 188 MAFNCEE-APLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGK 266 (356)
Q Consensus 188 ~~~~l~~-~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~ 266 (356)
+.+||.. .+++++++.||+++.+++.+||+|+++++++++++|.|||+++||||++ |+||.||++|+++++|++++|+
T Consensus 331 l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~-a~Ei~yVl~G~~~v~v~~~~g~ 409 (493)
T 2d5f_A 331 LHENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLN-ANSVIYVTRGKGRVRVVNAQGN 409 (493)
T ss_dssp CEEECCCGGGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESS-CCEEEEEEEEEEEEEEECTTSC
T ss_pred eeecccccCCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCC-CCEEEEEEeceEEEEEEcCCCC
Confidence 4566664 5667778999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred eEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEcCCCCceeccccccccccCCCHHHHHHHcCCCHHHHHHHHhcCC
Q 018395 267 RVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRA 346 (356)
Q Consensus 267 ~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~~~~p~~~~laG~~s~l~~~p~~vl~~af~~~~~~~~~l~~~~~ 346 (356)
++++.+|++|||+|||+|++|++.+++++++|++++++++|+..++ ++||++||++||+++|+++.+++++|+++++
T Consensus 410 ~~~~~~l~~GDv~vvP~G~~H~~~n~~e~~~~l~~~ts~~p~~~~l---~s~~~~~p~eVla~aF~v~~~~v~~l~~~~~ 486 (493)
T 2d5f_A 410 AVFDGELRRGQLLVVPQNFVVAEQGGEQGLEYVVFKTHHNAVSSYI---KDVFRAIPSEVLSNSYNLGQSQVRQLKYQGN 486 (493)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEESSTTCCEEEH---HHHHHHSCHHHHHHHHTCCHHHHHHHHHSSC
T ss_pred EEEeEEEcCCCEEEECCCCeEeeeeCCCCEEEEEEECCCCCcceeH---HHHHHhCCHHHHHHHHCcCHHHHHHHHhcCC
Confidence 9998999999999999999999988778899999999999999888 7999999999999999999999999999998
Q ss_pred CeEEecCC
Q 018395 347 NEAIFFPP 354 (356)
Q Consensus 347 ~~~~~~~p 354 (356)
+++|| +|
T Consensus 487 e~~i~-~p 493 (493)
T 2d5f_A 487 SGPLV-NP 493 (493)
T ss_dssp SSSEE-CC
T ss_pred Cceec-CC
Confidence 88754 55
No 10
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=100.00 E-value=6.6e-69 Score=530.11 Aligned_cols=340 Identities=18% Similarity=0.298 Sum_probs=297.9
Q ss_pred cccceeeCCCeEEEEeCC--CCCCCcccCc-eEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEc
Q 018395 9 LAKQVYGGNGGSYHAWCP--NELPMLRQGN-IGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIK 85 (356)
Q Consensus 9 ~~~~~~~~~~G~i~~~~~--~~~p~l~~~~-~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~ 85 (356)
.+++++++++|+++.... ...+.|++.+ +++++++|+||++.+||||+++|++||++|+++++++++++ ..+++|+
T Consensus 18 ~~~~~~~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~-~~~~~l~ 96 (416)
T 1uij_A 18 SFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDD-RDSYNLH 96 (416)
T ss_dssp SEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSC-EEEEEEC
T ss_pred cccceEEcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECCC-CeEEEec
Confidence 345689999999998533 1236788876 99999999999999999669999999999999999998854 4569999
Q ss_pred CCCEEEeCCCcEEEEEec-CCCcEEEEEEeeCCCCCCCCceeEEeecccc---cccccCcHHHHHhhccCCHHHHHHhh-
Q 018395 86 KGDGIALPFGVVTWWYNK-EDTELVVLFLGDTSKGHKAGEFTNFFLTGAN---GIFTGFSTEFVSRAWDLDENTVKTLV- 160 (356)
Q Consensus 86 ~GDv~~iP~G~~H~~~N~-g~e~l~~l~i~~~~~~~~pg~~~~f~lag~~---s~l~~~~~~vl~~af~~~~~~~~~l~- 160 (356)
+||+++||+|.+||++|+ ++++|+++++++++ ++||.+.+|+|+|+. +||++||++||++||+++.+++++|+
T Consensus 97 ~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~--~~pg~~~~f~l~g~~~~~~~~~~~~~~vLa~af~v~~~~v~~l~~ 174 (416)
T 1uij_A 97 PGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPV--NKPGRYDDFFLSSTQAQQSYLQGFSHNILETSFHSEFEEINRVLF 174 (416)
T ss_dssp TTEEEEECTTCEEEEEECCSSCCEEEEEEEEES--SBTTBCCEEESSCBSSCCCGGGGSCHHHHHHHHTSCHHHHHHHHT
T ss_pred CCCEEEECCCCeEEEEecCCCCCEEEEEEeccC--CCCCcceeeeecCCcccchhhhcCCHHHHHHHhCcCHHHHHhhhh
Confidence 999999999999999999 49999999999865 678889999999864 69999999999999999999999999
Q ss_pred ccc-----CCceEEEcCCCCcC--CC------CCcccCCCceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCceeEE
Q 018395 161 GKQ-----TGKGIVKLDANAKL--PE------PKKEHRDGMAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADL 227 (356)
Q Consensus 161 ~~q-----~~~~iv~~~~~~~~--~~------p~~~~~~~~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~ 227 (356)
++| ++++|+++++++.. .+ +....+...+|||.++.|.+ ++.+|+++++++.+||+|+++++|+++
T Consensus 175 ~~~~~~~~~~g~Iv~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~p~~-~~~~G~~~~~~~~~~P~L~~l~is~a~ 253 (416)
T 1uij_A 175 GEEEEQRQQEGVIVELSKEQIRQLSRRAKSSSRKTISSEDEPFNLRSRNPIY-SNNFGKFFEITPEKNPQLRDLDIFLSS 253 (416)
T ss_dssp CTTCGGGSBSSSEEECCHHHHHHHTSSCBCCCGGGGGCSSSCEETTSSCCSE-ECSSEEEEEECTTTCHHHHHHTEEEEE
T ss_pred ccccccccCcceEEEeCCcccchhhhcccccCCCCCCCcccceeccccCCCc-cCCCceEEEEChHHCccchhcCcceEE
Confidence 665 35899998754321 01 11122456899999888865 689999999999999999999999999
Q ss_pred EEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCc-------------eEEEEEecCCcEEEEcCCcEEEEeeCCC
Q 018395 228 VRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGK-------------RVLETTVKAGNLFIVPRFYVVSKIADPD 294 (356)
Q Consensus 228 v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~-------------~~~~~~l~~Gdv~vvP~g~~h~~~~~~~ 294 (356)
++|+||||++|||||+ |+||+||++|+++++|++++|. ++++++|++|||||||+|++|++.|. +
T Consensus 254 ~~l~~g~~~~pH~h~~-A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~-~ 331 (416)
T 1uij_A 254 VDINEGALLLPHFNSK-AIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT-S 331 (416)
T ss_dssp EEECTTEEEEEEEESS-CEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEES-S
T ss_pred EEEcCCcEecceEcCC-CcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC-C
Confidence 9999999999999999 9999999999999999999872 58899999999999999999999887 7
Q ss_pred CeEEEEEEcCC-CCceecccc-ccccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEecCC
Q 018395 295 GLAWFSIITTP-NPIFTHLAG-SIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANEAIFFPP 354 (356)
Q Consensus 295 ~~~~~~~~~~~-~p~~~~laG-~~s~l~~~p~~vl~~af~~~~~~~~~l~~~~~~~~~~~~p 354 (356)
+++|++|++++ +|+.++||| +++||++||++||+++|+++.+++++|+++++++.++.+|
T Consensus 332 ~~~~l~f~~~~~~~~~~~laG~~~sv~~~~p~~vla~af~~~~~~v~~l~~~~~~~~~~~~~ 393 (416)
T 1uij_A 332 NLNFLAFGINAENNQRNFLAGEKDNVVRQIERQVQELAFPGSAQDVERLLKKQRESYFVDAQ 393 (416)
T ss_dssp SEEEEEEEETCTTCCEEESSSSTTBSGGGSCHHHHHHHSSSCHHHHHHHTTSCCSCSEEEC-
T ss_pred CeEEEEEEcCCCCCcceecccchhhHHHhCCHHHHHHHHCcCHHHHHHHHhcCCccEEECCc
Confidence 89999998655 899999999 7999999999999999999999999999999888777554
No 11
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=100.00 E-value=4.5e-68 Score=526.04 Aligned_cols=339 Identities=19% Similarity=0.312 Sum_probs=297.5
Q ss_pred ccceeeCCCeEEEEeCC--CCCCCcccCc-eEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcC
Q 018395 10 AKQVYGGNGGSYHAWCP--NELPMLRQGN-IGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKK 86 (356)
Q Consensus 10 ~~~~~~~~~G~i~~~~~--~~~p~l~~~~-~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~ 86 (356)
.++++++++|+++.++. .+.+.|++.+ +++++++|+||++++||||+++||+||++|+++++++++++ ..+++|++
T Consensus 31 ~~~~~~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~-~~~~~l~~ 109 (434)
T 2ea7_A 31 FRTLYRNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDS-RDSYILEQ 109 (434)
T ss_dssp EEEEEEETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSC-EEEEEEET
T ss_pred ccceEEcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCccCCCceEEEEEecEEEEEEEeCCC-CEEEEeCC
Confidence 34678899999999432 2447888876 99999999999999999669999999999999999998765 45689999
Q ss_pred CCEEEeCCCcEEEEEecC-CCcEEEEEEeeCCCCCCCCceeEEeeccc---ccccccCcHHHHHhhccCCHHHHHHhh-c
Q 018395 87 GDGIALPFGVVTWWYNKE-DTELVVLFLGDTSKGHKAGEFTNFFLTGA---NGIFTGFSTEFVSRAWDLDENTVKTLV-G 161 (356)
Q Consensus 87 GDv~~iP~G~~H~~~N~g-~e~l~~l~i~~~~~~~~pg~~~~f~lag~---~s~l~~~~~~vl~~af~~~~~~~~~l~-~ 161 (356)
||++++|+|.+||++|+| +++|+++++++++ ++||.+.+|+|+|+ .+||++||++||++||+++.+++++|+ +
T Consensus 110 GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s--~~pg~~~~f~l~g~~~~~~~~~~~~~~vLa~af~v~~~~v~~l~~~ 187 (434)
T 2ea7_A 110 GHAQKIPAGTTFFLVNPDDNENLRIIKLAIPV--NNPHRFQDFFLSSTEAQQSYLRGFSKNILEASFDSDFKEINRVLFG 187 (434)
T ss_dssp TEEEEECTTCEEEEEECCSSCCEEEEEEEEES--SBTTBCCEEECSCCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHHTC
T ss_pred CCEEEECCCccEEEEeCCCCCCeEEEEEecCC--CCCCceeeeeecCCcchhhhhhcCCHHHHHHHhCCCHHHHHhhhhc
Confidence 999999999999999998 8899999998876 67888999999986 369999999999999999999999999 5
Q ss_pred cc----------CCceEEEcCCCCc---CCC-----CCcccCCCceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCc
Q 018395 162 KQ----------TGKGIVKLDANAK---LPE-----PKKEHRDGMAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGC 223 (356)
Q Consensus 162 ~q----------~~~~iv~~~~~~~---~~~-----p~~~~~~~~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~ 223 (356)
++ ++++|+++++++. ... +....+...+|||.+++|++ ++++|+++++++.+||+|++||+
T Consensus 188 ~~~~~~~~~~~q~~g~Iv~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~p~~-~~~gG~v~~~~~~~~P~L~~l~i 266 (434)
T 2ea7_A 188 EERQQQQGEESREEGVIVELKREQIQELMKHAKSSSRKELSSQDEPFNLRNSKPIY-SNKFGRWYEMTPEKNPQLKDLDV 266 (434)
T ss_dssp C---------CCCSSSEEECCHHHHHHHHTTSBCCCSSCTTCSSSCEETTSSCCSE-EETTEEEEEECTTTCHHHHHHTE
T ss_pred ccccccccccccccceEEECCcccChhhcccccccCCCCCCCcccceeeccCCCce-eCCCcEEEEEChhhCccccccCc
Confidence 43 4689999865432 011 11122345799999998876 68999999999999999999999
Q ss_pred eeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCC----------c--eEEEEEecCCcEEEEcCCcEEEEee
Q 018395 224 GADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDG----------K--RVLETTVKAGNLFIVPRFYVVSKIA 291 (356)
Q Consensus 224 s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g----------~--~~~~~~l~~Gdv~vvP~g~~h~~~~ 291 (356)
|+++++|+||||++|||||+ |+||+||++|+++++|++++| + ++|+++|++|||||||+|++|++.|
T Consensus 267 s~a~v~l~pG~m~~pH~hp~-A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n 345 (434)
T 2ea7_A 267 FISSVDMKEGALLLPHYSSK-AIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINA 345 (434)
T ss_dssp EEEEEEECTTEEEEEEEESS-CEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEE
T ss_pred ceEEEEEcCCeeeccEEcCC-CCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEc
Confidence 99999999999999999999 999999999999999999975 2 3889999999999999999999988
Q ss_pred CCCCeEEEEEEcCC-CCceecccc-ccccccCCCHHHHHHHcCCCHHHHHHHHhcCCCeEEecCC
Q 018395 292 DPDGLAWFSIITTP-NPIFTHLAG-SIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANEAIFFPP 354 (356)
Q Consensus 292 ~~~~~~~~~~~~~~-~p~~~~laG-~~s~l~~~p~~vl~~af~~~~~~~~~l~~~~~~~~~~~~p 354 (356)
. ++++|++|.++. +++.++||| +++||++||++||+++|+++.+++++|++.+++++|+.++
T Consensus 346 ~-~~~~~v~f~~~~~~~~~~~laG~~~sv~~~~p~~vla~af~v~~~~v~~l~~~~~e~~~~~~~ 409 (434)
T 2ea7_A 346 T-SNLNFFAFGINAENNRRNFLAGGKDNVMSEIPTEVLEVSFPASGKKVEKLIKKQSESHFVDAQ 409 (434)
T ss_dssp S-SSEEEEEEEETCTTCCEEESSSSTTBGGGGSCHHHHHHHSSSCHHHHHHHHTTCCSCSEEECC
T ss_pred C-CCeEEEEEECCCCCCCceecccchhhhhhhCCHHHHHHHHCcCHHHHHHHHhcCCccEEECCC
Confidence 7 789999987554 789999999 8999999999999999999999999999999888877553
No 12
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=100.00 E-value=7.8e-68 Score=520.40 Aligned_cols=338 Identities=18% Similarity=0.295 Sum_probs=295.2
Q ss_pred ccccceeeCCCeEEEEeCCCC--CCCccc-CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEE
Q 018395 8 KLAKQVYGGNGGSYHAWCPNE--LPMLRQ-GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAI 84 (356)
Q Consensus 8 ~~~~~~~~~~~G~i~~~~~~~--~p~l~~-~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l 84 (356)
....+++++++|+++.|...+ .+.|+| .++++++++|+||++.+|||.+|+|++||++|++++++|++++. ++++|
T Consensus 12 ~~f~~~~~se~G~i~~l~~f~~~s~~l~~l~~~~l~~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~~~~~-~~~~l 90 (418)
T 3s7i_A 12 RRFSTRYGNQNGRIRVLQRFDQRSRQFQNLQNHRIVQIEAKPNTLVLPKHADADNILVIQQGQATVTVANGNNR-KSFNL 90 (418)
T ss_dssp GGEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCE-EEEEE
T ss_pred ccccceEEcCCcEEEEecccCCcchhcccccceEEEEEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEecCCE-EEEEe
Confidence 446689999999999996422 367777 68999999999999999995599999999999999999999764 57999
Q ss_pred cCCCEEEeCCCcEEEEEecC-CCcEEEEEEeeCCCCCCCCceeEEeecccc---cccccCcHHHHHhhccCCHHHHHHhh
Q 018395 85 KKGDGIALPFGVVTWWYNKE-DTELVVLFLGDTSKGHKAGEFTNFFLTGAN---GIFTGFSTEFVSRAWDLDENTVKTLV 160 (356)
Q Consensus 85 ~~GDv~~iP~G~~H~~~N~g-~e~l~~l~i~~~~~~~~pg~~~~f~lag~~---s~l~~~~~~vl~~af~~~~~~~~~l~ 160 (356)
++||+++||+|++||++|.+ ++.|+++++.+++ ++||.+..|||+|.. +||++||++||++||+++.+++++|+
T Consensus 91 ~~GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s--~~pg~~~~f~laG~~~~~s~~~gf~~evLa~af~v~~~~v~kl~ 168 (418)
T 3s7i_A 91 DEGHALRIPSGFISYILNRHDNQNLRVAKISMPV--NTPGQFEDFFPASSRDQSSYLQGFSRNTLEAAFNAEFNEIRRVL 168 (418)
T ss_dssp ETTEEEEECTTCEEEEEECCSSCCEEEEEEEEES--SBTTBCCEECSSCCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHT
T ss_pred cCCCEEEECCCCeEEEEecCCCccEEEEEeecCc--CCCCccceeeccCCcchhHHhhcCCHHHHHHHHCcCHHHHHhhh
Confidence 99999999999999999965 5689999988876 579999999999874 79999999999999999999999999
Q ss_pred cc---------------------cCCceEEEcCCCCc--CCCC------Ccc---cCCCceeeccCCCCCcccCCCcEEE
Q 018395 161 GK---------------------QTGKGIVKLDANAK--LPEP------KKE---HRDGMAFNCEEAPLDVDIKNGGRVV 208 (356)
Q Consensus 161 ~~---------------------q~~~~iv~~~~~~~--~~~p------~~~---~~~~~~~~l~~~~~~~~~~~gG~~~ 208 (356)
.. |.++.|+++++++. ..++ +.. ....++|||.+++|++ ++.+|+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~q~~g~Iv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~nl~~~~p~~-~n~~G~~~ 247 (418)
T 3s7i_A 169 LEENAGGEQEERGQRRWSTRSSENNEGVIVKVSKEHVEELTKHAKSVSKKGSEEEGDITNPINLREGEPDL-SNNFGKLF 247 (418)
T ss_dssp TSCC--------------------CCCSEEECCHHHHHHHHTTCBC--------CTTCCCCEETTCSCCSE-EETTEEEE
T ss_pred cccccccccccccccccccccccccCCceEEcChhhhhhccccccccCCCCcCcccCCCcccccccCCCce-eCCCCeEE
Confidence 43 34688999976542 1111 111 1247899999999986 68899999
Q ss_pred EeCCCCC-CCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCc---------------------
Q 018395 209 LLNTKNL-PLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGK--------------------- 266 (356)
Q Consensus 209 ~~~~~~~-p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~--------------------- 266 (356)
.+++.+| |+|+++|||+++++|.||||++|||||+ |+||+||++|+++++|+++++.
T Consensus 248 ~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~-A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (418)
T 3s7i_A 248 EVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSK-AMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSN 326 (418)
T ss_dssp EECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESS-CEEEEEEEECCEEEEEEEEEEC-------------------CC
T ss_pred EechHHcchhhccCCeeEEEEEecCCceeCceecCC-CCEEEEEEeCeEEEEEEeCCCcccccccccccccccccccccc
Confidence 9999999 9999999999999999999999999999 9999999999999999998763
Q ss_pred ---eEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEc-CCCCceeccccc-cccccCCCHHHHHHHcCCCHHHHHHH
Q 018395 267 ---RVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIIT-TPNPIFTHLAGS-IGTWKSLSPSVLEAAFNVPSDVEKQF 341 (356)
Q Consensus 267 ---~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~-~~~p~~~~laG~-~s~l~~~p~~vl~~af~~~~~~~~~l 341 (356)
++++.+|++|||||||+|++||++++. +++|++|.+ +++|..++|||+ +++|++||++||++||+++.+++++|
T Consensus 327 ~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~-~l~~v~f~~~~~~~~~~~LAG~~~sv~~~~~~evla~af~v~~~~v~~L 405 (418)
T 3s7i_A 327 REVRRYTARLKEGDVFIMPAAHPVAINASS-ELHLLGFGINAENNHRIFLAGDKDNVIDQIEKQAKDLAFPGSGEQVEKL 405 (418)
T ss_dssp EEEEEEEEEECTTCEEEECTTCCEEEEESS-CEEEEEEEESCTTCCEEESSSSTTBHHHHSCHHHHHHHSSSCHHHHHHH
T ss_pred ccceEEEeeeCCCCEEEECCCCEEEEECCC-CEEEEEEEcCCCCCcceEccCchhhhhhcCCHHHHHHHhCCCHHHHHHH
Confidence 578899999999999999999998754 599999865 448999999998 59999999999999999999999999
Q ss_pred HhcCCCeEEe
Q 018395 342 RSKRANEAIF 351 (356)
Q Consensus 342 ~~~~~~~~~~ 351 (356)
++.++++.++
T Consensus 406 ~~~q~e~~~~ 415 (418)
T 3s7i_A 406 IKNQKESHFV 415 (418)
T ss_dssp HHTCCSCSEE
T ss_pred HhcCCcceee
Confidence 9999888665
No 13
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=100.00 E-value=1.7e-65 Score=500.77 Aligned_cols=330 Identities=15% Similarity=0.233 Sum_probs=281.6
Q ss_pred ccceeeCCCeEEEEe---CCCCCCCcccCc-eEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEc
Q 018395 10 AKQVYGGNGGSYHAW---CPNELPMLRQGN-IGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIK 85 (356)
Q Consensus 10 ~~~~~~~~~G~i~~~---~~~~~p~l~~~~-~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~ 85 (356)
.++++++++|+++.+ +.. .|.|++.+ +++++++|+||++.+||||+++||+||++|++++++++++++ .+++|+
T Consensus 22 ~~~~~~~e~G~i~~l~~~~~~-~~~l~~~~~~s~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~-~~~~l~ 99 (397)
T 2phl_A 22 WNTLFKNQYGHIRVLQRFDQQ-SKRLQNLEDYRLVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDR-REYFFL 99 (397)
T ss_dssp EEEEEEETTEEEEEECCHHHH-CGGGGGGTTCEEEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTE-EEEEEE
T ss_pred ccceEEcCCEEEEEecccCCC-ChhhcccccEEEEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCc-EEEEEC
Confidence 447899999999985 443 37899876 999999999999999999999999999999999999999876 479999
Q ss_pred CCCE------EEeCCCcEEEEEecC-CCcEEEEEEeeCCCCCCCCceeEEeeccc---ccccccCcHHHHHhhccCCHHH
Q 018395 86 KGDG------IALPFGVVTWWYNKE-DTELVVLFLGDTSKGHKAGEFTNFFLTGA---NGIFTGFSTEFVSRAWDLDENT 155 (356)
Q Consensus 86 ~GDv------~~iP~G~~H~~~N~g-~e~l~~l~i~~~~~~~~pg~~~~f~lag~---~s~l~~~~~~vl~~af~~~~~~ 155 (356)
+||+ ++||+|++||++|.| +++++++|+++++ ++| .+.+|+|+|. .+||++||++||++||+++.++
T Consensus 100 ~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~--~~~-~~~~f~L~G~~~~~s~~~~~~~~vLa~af~v~~~~ 176 (397)
T 2phl_A 100 TSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPV--NNP-QIHEFFLSSTEAQQSYLQEFSKHILEASFNSKFEE 176 (397)
T ss_dssp ESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEES--SSS-SCCEEECCCBTTBCCGGGGSCHHHHHHHHTSCHHH
T ss_pred CCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCC--CCc-cceeeeccCCCchhHHhhcCCHHHHHHHhCCCHHH
Confidence 9999 999999999999998 7899999999876 345 6789999985 4799999999999999999999
Q ss_pred HHHhh-ccc--CCceEEEcCCCCcCCCCCcccCCCceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecC
Q 018395 156 VKTLV-GKQ--TGKGIVKLDANAKLPEPKKEHRDGMAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDG 232 (356)
Q Consensus 156 ~~~l~-~~q--~~~~iv~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~ 232 (356)
+++|+ +++ +++.|+++++++..... ...++...+.+.++.|.+ ++++|+++++++.+ ++||+++++|+|
T Consensus 177 v~~l~~~~~~q~~~~Iv~~~~~~~~~~~-~~~~~~~~~~l~~~~p~~-~n~~G~~~~v~~~~------l~is~a~v~l~p 248 (397)
T 2phl_A 177 INRVLFEEEGQQEGVIVNIDSEQIKELS-KHAKSSSRKSLSKQDNTI-GNEFGNLTERTDNS------LNVLISSIEMEE 248 (397)
T ss_dssp HHHHHTCSTTCBSSSEEECCTTTHHHHH-HHHHTC---------CEE-EETTEEEEEEEETT------TTEEEEEEEECT
T ss_pred HHhhhhcccccccCceEEcCcccchhhh-ccCCCcccccccccCCcc-cCCCCeEEEEeecc------CCeeEEEEEEcC
Confidence 99999 443 47899999876431000 001122345677666654 79999999999987 789999999999
Q ss_pred CCeecccccccCCeeEEEEEeceEEEEEEcc------CCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEcCC-
Q 018395 233 KAMCSPGFSCDSALQVTYIVRGSGRAQIVGP------DGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTP- 305 (356)
Q Consensus 233 g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~------~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~~~- 305 (356)
|||++||||++ |+||.||++|+++++|+++ +|+++++.+|++|||||||+|++|++.|.. +++|++|.++.
T Consensus 249 G~~~~PH~h~~-A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~-~l~~l~f~~~s~ 326 (397)
T 2phl_A 249 GALFVPHYYSK-AIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATS-NVNFTGFGINAN 326 (397)
T ss_dssp TEEEEEEEESS-CEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESS-SEEEEEEEESCT
T ss_pred CcEeeeeEcCC-CCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCC-CeEEEEEECCCC
Confidence 99999999999 9999999999999999999 778899999999999999999999997764 89999986655
Q ss_pred CCceecccc-ccccccCCC-----HHHHHHHcCCCHHHHHHHHhcCCCeEEecCC
Q 018395 306 NPIFTHLAG-SIGTWKSLS-----PSVLEAAFNVPSDVEKQFRSKRANEAIFFPP 354 (356)
Q Consensus 306 ~p~~~~laG-~~s~l~~~p-----~~vl~~af~~~~~~~~~l~~~~~~~~~~~~p 354 (356)
+|+.++||| ++++|+++| ++||+++|+++++++++|+++++++.|+.++
T Consensus 327 ~~~~~~laG~~~sv~~~~p~~~~~~eVla~af~v~~~~v~~l~~~~~e~~i~~~~ 381 (397)
T 2phl_A 327 NNNRNLLAGKTDNVISSIGRALDGKDVLGLTFSGSGDEVMKLINKQSGSYFVDAH 381 (397)
T ss_dssp TCCEEESSSSSSBHHHHHHTSTTHHHHHHHHSSSCHHHHHHHHTTCCCCSEEECC
T ss_pred CCcceecccchhhHHhhCCCccchHHHHHHHhCcCHHHHHHHHhcCCccEEeCCC
Confidence 899999999 799999999 9999999999999999999998888666553
No 14
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=100.00 E-value=2.3e-45 Score=356.78 Aligned_cols=318 Identities=16% Similarity=0.167 Sum_probs=264.1
Q ss_pred eCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeC
Q 018395 15 GGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALP 93 (356)
Q Consensus 15 ~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP 93 (356)
..++|+++.++..++|.+. ++++.+++++||++..|||| +++|++||++|++++++++++++.+.+.|++||+++||
T Consensus 32 ~~~~G~~~~~~~~~~p~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip 109 (361)
T 2vqa_A 32 LYDGGTTKQVGTYNFPVSK--GMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFP 109 (361)
T ss_dssp EETTEEEEEESTTTCTTCC--SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEEC
T ss_pred ecCCceEEEeChhhCcccc--ceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEEC
Confidence 4689999999988888765 57889999999999999999 59999999999999999988775566899999999999
Q ss_pred CCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCceEEEc--
Q 018395 94 FGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKGIVKL-- 171 (356)
Q Consensus 94 ~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~iv~~-- 171 (356)
+|.+|++.|.+++++++++++++....+. ..|++ .+||+++|.++|+++|+++.+.+++|...+. .|+..
T Consensus 110 ~g~~H~~~n~~~~~~~~l~v~~~~~~~~~---~~~~~---~~~~~~~p~~vLa~~~~v~~~~~~~l~~~~~--~i~~~~~ 181 (361)
T 2vqa_A 110 RGWGHSIEGIGPDTAKFLLVFNDGTFSEG---ATFSV---TDWLSHTPIAWVEENLGWTAAQVAQLPKKQV--YISSYGP 181 (361)
T ss_dssp TTCEEEEEECSSSCEEEEEEESSTTCCTT---SSEEH---HHHHHTSCHHHHHHHHTCCHHHHTTSCSSCC--CEECSSC
T ss_pred CCCeEEEEeCCCCCEEEEEEECCCCcccc---ceecH---hHHHHhCCHHHHHHHhCcCHHHHHhccccCc--eEEeCCC
Confidence 99999999999999999998876543332 23333 4899999999999999999999999987654 46521
Q ss_pred -CCCC---cCCCCCcccCCCceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCee
Q 018395 172 -DANA---KLPEPKKEHRDGMAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQ 247 (356)
Q Consensus 172 -~~~~---~~~~p~~~~~~~~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~e 247 (356)
.... ....|.......+.|++...++. ..+.+|+++.+.+.++|.+++ +++.++.|.||++..||||++ +.|
T Consensus 182 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gg~~~~~~~~~~~~~~~--~~~~~~~l~pg~~~~~H~H~~-~~E 257 (361)
T 2vqa_A 182 ASGPLASATPQGQTAKIEVPHTHNLLGQQPL-VSLGGNELRLASAKEFPGSFN--MTGALIHLEPGAMRQLHWHPN-ADE 257 (361)
T ss_dssp CCCCGGGCCCSSCCCBCCSCCEEECTTSCCS-EEETTEEEEEECTTTCTTSTT--CEEEEEEECTTCEEEEEECSS-CCE
T ss_pred CCCccccccccCcCCCCCcceEeccccCCCc-ccCCCceEEEEehhhCcCccc--ceEEEEEECCCcccccccCCC-CCE
Confidence 1110 01112222234567777766664 367899999999999999875 779999999999999999998 999
Q ss_pred EEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCCCeEEEEEEcCCCCceeccccccccccCCCHHH
Q 018395 248 VTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSV 326 (356)
Q Consensus 248 i~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~~~~~~~~~~p~~~~laG~~s~l~~~p~~v 326 (356)
+.||++|++++++++++|+ .....|++||+++||+|.+|++.| ++++++++.+.++.+++...++ ++++++|++|
T Consensus 258 ~~~Vl~G~~~~~v~~~~g~-~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~v 333 (361)
T 2vqa_A 258 WQYVLDGEMDLTVFASEGK-ASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLS---TWLASNPSSV 333 (361)
T ss_dssp EEEEEESCEEEEEECSTTC-EEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHH---HHHHTSCHHH
T ss_pred EEEEEeCEEEEEEEcCCCc-EEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHH---HHhhhCCHHH
Confidence 9999999999999998875 345789999999999999999854 7889999999998888877775 6899999999
Q ss_pred HHHHcCCCHHHHHHHHhcCCCeEEe
Q 018395 327 LEAAFNVPSDVEKQFRSKRANEAIF 351 (356)
Q Consensus 327 l~~af~~~~~~~~~l~~~~~~~~~~ 351 (356)
|+++|+++++++++|+++ .+.++.
T Consensus 334 l~~~f~~~~~~~~~l~~~-~~~~~~ 357 (361)
T 2vqa_A 334 LGNTFQISPELTKKLPVQ-DTIFSL 357 (361)
T ss_dssp HHHHHTCCHHHHTTSCCS-CCSEEC
T ss_pred HHHHHCcCHHHHHhhhcc-CCcccc
Confidence 999999999999999855 445454
No 15
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=100.00 E-value=2.6e-39 Score=316.91 Aligned_cols=310 Identities=18% Similarity=0.248 Sum_probs=253.4
Q ss_pred eCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCC
Q 018395 15 GGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPF 94 (356)
Q Consensus 15 ~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~ 94 (356)
..++|+++.++...+|.+. ++.+.++++.||+...+|||.+.|++||++|++++.+++.+++...+.|++||++++|+
T Consensus 59 ~~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~ 136 (385)
T 1j58_A 59 LEKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPS 136 (385)
T ss_dssp EETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECT
T ss_pred ccCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECC
Confidence 3589999999998888776 78999999999999999999999999999999999998876665457999999999999
Q ss_pred CcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCceEEEcCCC
Q 018395 95 GVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKGIVKLDAN 174 (356)
Q Consensus 95 G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~iv~~~~~ 174 (356)
|.+|++.|.++ +++++++++... ...+.+|.+ .+||+.+|.++|+++|+++.++++++...+. .|+.....
T Consensus 137 g~~H~~~n~~~-~~~~~~v~~~~~---~~~~~~~~~---~~~~~~~p~evla~~~~vs~~~~~~l~~~~~--~i~~~~~p 207 (385)
T 1j58_A 137 GLPHSIQALEE-GAEFLLVFDDGS---FSENSTFQL---TDWLAHTPKEVIAANFGVTKEEISNLPGKEK--YIFENQLP 207 (385)
T ss_dssp TCCEEEEEEEE-EEEEEEEESCTT---CCGGGEEEH---HHHHHTSCHHHHHHHHTCCTGGGTTSCSSCC--SEECCCCC
T ss_pred CCeEEEEECCC-CEEEEEEECCCC---ccccchhhh---hhhhhcccHHHHHHHhCCCHHHHHhcccccc--eEeccCCC
Confidence 99999999874 588988887542 333345554 4899999999999999999999999877543 45533211
Q ss_pred Cc-----CCCCCcccCCCceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEE
Q 018395 175 AK-----LPEPKKEHRDGMAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVT 249 (356)
Q Consensus 175 ~~-----~~~p~~~~~~~~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~ 249 (356)
.. ...+.......+.+++...++ + ...+|+++.+.+.+++..+ ++++..+.|.||+...+|||+. +.|+.
T Consensus 208 ~~l~~~~~~~~~~~~~~~~v~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~-~~E~~ 282 (385)
T 1j58_A 208 GSLKDDIVEGPNGEVPYPFTYRLLEQEP-I-ESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPN-THEWQ 282 (385)
T ss_dssp CCHHHHCCCCTTCCCSSCSEEEGGGSCC-E-ECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSS-SCEEE
T ss_pred CccccccccCCCCCCCCCeeeecccCCC-e-eCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCC-CCEEE
Confidence 00 011112223456788887776 3 4678999999999998754 4889999999999999999998 89999
Q ss_pred EEEeceEEEEEEccCCc-eEEEEEecCCcEEEEcCCcEEEEe-eCCCCeEEEEEEcCCCCceeccccccccccCCCHHHH
Q 018395 250 YIVRGSGRAQIVGPDGK-RVLETTVKAGNLFIVPRFYVVSKI-ADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVL 327 (356)
Q Consensus 250 ~v~~G~~~~~iv~~~g~-~~~~~~l~~Gdv~vvP~g~~h~~~-~~~~~~~~~~~~~~~~p~~~~laG~~s~l~~~p~~vl 327 (356)
||++|++++++.+++|+ + ...|++||+++||+|.+|++. .+++++++++++....+....+ .++|..+|++|+
T Consensus 283 ~Vl~G~~~~~i~~~~g~~~--~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~---~~~l~~~~~~v~ 357 (385)
T 1j58_A 283 YYISGKARMTVFASDGHAR--TFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSL---NQWLAMLPETFV 357 (385)
T ss_dssp EEEESEEEEEEEEETTEEE--EEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEH---HHHHHTSCHHHH
T ss_pred EEEeCeEEEEEEcCCCcEE--EEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCH---HHHHHhCCHHHH
Confidence 99999999999988874 4 458999999999999999984 5778999999987766544333 588999999999
Q ss_pred HHHcCCCHHHHHHHHhcC
Q 018395 328 EAAFNVPSDVEKQFRSKR 345 (356)
Q Consensus 328 ~~af~~~~~~~~~l~~~~ 345 (356)
+++|+++++++++|++.+
T Consensus 358 ~~~f~~~~~~~~~l~~~~ 375 (385)
T 1j58_A 358 QAHLDLGKDFTDVLSKEK 375 (385)
T ss_dssp HHHHTCCHHHHTTCCSSC
T ss_pred HHHhCCCHHHHHhhhccC
Confidence 999999999999998653
No 16
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.97 E-value=3.7e-31 Score=232.61 Aligned_cols=161 Identities=20% Similarity=0.361 Sum_probs=140.3
Q ss_pred cccceeeCCCeEEEEeCC--CCCCCccc-CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEc
Q 018395 9 LAKQVYGGNGGSYHAWCP--NELPMLRQ-GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIK 85 (356)
Q Consensus 9 ~~~~~~~~~~G~i~~~~~--~~~p~l~~-~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~ 85 (356)
..++++++++|+++.++. ...+.+.+ .++++.+++|+||++..||+++++|++||++|+++++++++++. ++++|+
T Consensus 10 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~~-~~~~l~ 88 (178)
T 1dgw_A 10 KFLTLFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGR-DTYKLD 88 (178)
T ss_dssp GEEEEEEETTEEEEEECCTTSSCGGGGGGTTEEEEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTEE-EEEEEE
T ss_pred hcccceEcCCCEEEEEcccCCcchhcCCcCcEEEEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEeCCCc-EEEEEC
Confidence 345678899999999544 11134444 47999999999999999994499999999999999999988764 568999
Q ss_pred CCCEEEeCCCcEEEEEecCCC-cEEEEEEeeCCCCCCCCceeEEeeccc---ccccccCcHHHHHhhccCCHHHHHHhh-
Q 018395 86 KGDGIALPFGVVTWWYNKEDT-ELVVLFLGDTSKGHKAGEFTNFFLTGA---NGIFTGFSTEFVSRAWDLDENTVKTLV- 160 (356)
Q Consensus 86 ~GDv~~iP~G~~H~~~N~g~e-~l~~l~i~~~~~~~~pg~~~~f~lag~---~s~l~~~~~~vl~~af~~~~~~~~~l~- 160 (356)
+||+++||+|.+||+.|.+++ +++++++.+++ ++||.+..|||+|. .+||++||++||+++|+++++++++|+
T Consensus 89 ~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~--~~~g~~~~~~l~g~~~~~~~~~~~p~~vla~af~v~~~~~~~l~~ 166 (178)
T 1dgw_A 89 QGDAIKIQAGTPFYLINPDNNQNLRILKFAITF--RRPGTVEDFFLSSTKRLPSYLSAFSKNFLEASYDSPYDEIEQTLL 166 (178)
T ss_dssp TTEEEEECTTCCEEEEECCSSSCEEEEEEEECC--SSTTCCCEEESSCCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHTT
T ss_pred CCCEEEECCCCeEEEEeCCCCCCEEEEEEECCC--CCCCceEEeeccCCcCcchhhhhCCHHHHHHHHCcCHHHHHHHhc
Confidence 999999999999999999886 89999998876 78999999999998 799999999999999999999999999
Q ss_pred cccCCceEEEcC
Q 018395 161 GKQTGKGIVKLD 172 (356)
Q Consensus 161 ~~q~~~~iv~~~ 172 (356)
++|+++.|+|++
T Consensus 167 ~~~~~~~iv~~~ 178 (178)
T 1dgw_A 167 QEEQEGVIVKMP 178 (178)
T ss_dssp SCCSSSSEEECC
T ss_pred CcCcCceEEEcC
Confidence 567789999975
No 17
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.96 E-value=5.2e-29 Score=246.36 Aligned_cols=157 Identities=16% Similarity=0.251 Sum_probs=143.1
Q ss_pred cccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCc-eEEEEEcC
Q 018395 9 LAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKE-EKVVAIKK 86 (356)
Q Consensus 9 ~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~-~~~~~l~~ 86 (356)
...+++.+.+|+++.+++.++|.|+..++++++++|.||++++|||| +|+||+||++|++++++++++++ ..+.+|++
T Consensus 295 ~~~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~ 374 (466)
T 3kgl_A 295 SNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQ 374 (466)
T ss_dssp GGEEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecC
Confidence 44578999999999999999999999999999999999999999999 99999999999999999998754 45678999
Q ss_pred CCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCc
Q 018395 87 GDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGK 166 (356)
Q Consensus 87 GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~ 166 (356)
|||++||+|++|++ |.+++++++++++++. +|+ ..+|+|.++||+++|++||+++|+++.+++++|++++++.
T Consensus 375 GDV~v~P~G~~H~~-~ag~e~~~~l~~f~s~---np~---~~~LaG~~s~~~~lP~eVla~aF~v~~~~v~~Lk~~q~e~ 447 (466)
T 3kgl_A 375 GQLLSIPQGFSVVK-RATSEQFRWIEFKTNA---NAQ---INTLAGRTSVLRGLPLEVISNGYQISLEEARRVKFNTIET 447 (466)
T ss_dssp TCEEEECTTCEEEE-EECSSEEEEEEEESSS---SCC---EEESSSTTCTGGGSCHHHHHHHHTCCHHHHHHHHHSCCCS
T ss_pred CcEEEECCCCeEEE-EcCCCCEEEEEEECCC---CCc---cccccchhhhhhhCCHHHHHHHhCcCHHHHHHHHhccCcc
Confidence 99999999999998 7788899999977643 564 5689998899999999999999999999999999999999
Q ss_pred eEEEcC
Q 018395 167 GIVKLD 172 (356)
Q Consensus 167 ~iv~~~ 172 (356)
+|+...
T Consensus 448 ~i~~~~ 453 (466)
T 3kgl_A 448 TLTHSS 453 (466)
T ss_dssp SEEECC
T ss_pred EEECCC
Confidence 999754
No 18
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.96 E-value=3.1e-28 Score=242.46 Aligned_cols=156 Identities=19% Similarity=0.294 Sum_probs=140.6
Q ss_pred cccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCc-eEEEEEcC
Q 018395 9 LAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKE-EKVVAIKK 86 (356)
Q Consensus 9 ~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~-~~~~~l~~ 86 (356)
...+++.+.+|++..+++.++|.|+..++++++++|.||++++|||| +|+||+||++|++++++|+++++ ....+|++
T Consensus 330 ~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~ 409 (496)
T 3ksc_A 330 SSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEA 409 (496)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecC
Confidence 44578999999999999999999999999999999999999999999 99999999999999999998754 34567999
Q ss_pred CCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCc
Q 018395 87 GDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGK 166 (356)
Q Consensus 87 GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~ 166 (356)
|||++||+|++|++.|. ++++++++++++ .+|+ ..+|+|..+||+++|++||+++|+++.+++++|+++|++.
T Consensus 410 GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s---~np~---~~~LaG~~sv~~~~p~eVLa~aF~v~~~~v~~Lk~~q~e~ 482 (496)
T 3ksc_A 410 GRALTVPQNYAVAAKSL-SDRFSYVAFKTN---DRAG---IARLAGTSSVINNLPLDVVAATFNLQRNEARQLKSNNPFK 482 (496)
T ss_dssp TCEEEECTTCEEEEEEC-SSEEEEEEEESS---TTCC---EEESSSTTCTTTTSCHHHHHHHHTCCHHHHHHHHHSCCCS
T ss_pred CeEEEECCCCEEEEEeC-CCCEEEEEEECC---CCCc---cccccchhhhhhhCCHHHHHHHHCcCHHHHHHHHhcCCcc
Confidence 99999999999998775 778999987754 3464 5689998899999999999999999999999999999999
Q ss_pred eEEEc
Q 018395 167 GIVKL 171 (356)
Q Consensus 167 ~iv~~ 171 (356)
+|+..
T Consensus 483 ~i~~~ 487 (496)
T 3ksc_A 483 FLVPA 487 (496)
T ss_dssp SEECC
T ss_pred EEeCC
Confidence 99954
No 19
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.96 E-value=1.3e-28 Score=241.75 Aligned_cols=155 Identities=19% Similarity=0.279 Sum_probs=139.2
Q ss_pred ccceeeCCCeEEEEeCCCCC-CCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCC----------
Q 018395 10 AKQVYGGNGGSYHAWCPNEL-PMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEK---------- 77 (356)
Q Consensus 10 ~~~~~~~~~G~i~~~~~~~~-p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~---------- 77 (356)
.+|.+.+.+|++..+++.++ |.|++.++++++++|.||++.+|||| +|.||+||++|++++++++++|
T Consensus 235 ~~p~~~n~~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~ 314 (418)
T 3s7i_A 235 GEPDLSNNFGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREE 314 (418)
T ss_dssp SCCSEEETTEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC---------
T ss_pred CCCceeCCCCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCcccccccccc
Confidence 34568899999999999999 99999999999999999999999999 9999999999999999998876
Q ss_pred ---------------ceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeeccc-ccccccCc
Q 018395 78 ---------------EEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTGA-NGIFTGFS 141 (356)
Q Consensus 78 ---------------~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag~-~s~l~~~~ 141 (356)
+..+.+|++|||++||+|++||+.|.+ +++++++..++ .+| ..+||||. +++|++||
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~--~~~---~~~~LAG~~~sv~~~~~ 387 (418)
T 3s7i_A 315 EEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINA--ENN---HRIFLAGDKDNVIDQIE 387 (418)
T ss_dssp ----------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESC--TTC---CEEESSSSTTBHHHHSC
T ss_pred ccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCC--CCC---cceEccCchhhhhhcCC
Confidence 234689999999999999999999865 49998876544 456 48899998 59999999
Q ss_pred HHHHHhhccCCHHHHHHhhcccCCceEEEc
Q 018395 142 TEFVSRAWDLDENTVKTLVGKQTGKGIVKL 171 (356)
Q Consensus 142 ~~vl~~af~~~~~~~~~l~~~q~~~~iv~~ 171 (356)
++||++||+++.+++++|+++|++.+|+.+
T Consensus 388 ~evla~af~v~~~~v~~L~~~q~e~~~~~~ 417 (418)
T 3s7i_A 388 KQAKDLAFPGSGEQVEKLIKNQKESHFVSA 417 (418)
T ss_dssp HHHHHHHSSSCHHHHHHHHHTCCSCSEEEC
T ss_pred HHHHHHHhCCCHHHHHHHHhcCCcceeecC
Confidence 999999999999999999999999999864
No 20
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.95 E-value=8e-28 Score=211.32 Aligned_cols=160 Identities=18% Similarity=0.192 Sum_probs=136.4
Q ss_pred CCceeeccCCCCCcccCCCcEEEEeCC-----CCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEE
Q 018395 186 DGMAFNCEEAPLDVDIKNGGRVVLLNT-----KNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQI 260 (356)
Q Consensus 186 ~~~~~~l~~~~~~~~~~~gG~~~~~~~-----~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~i 260 (356)
+++.|++...++.+ .+.+|+++.+++ ..||.|++ +++++++|.||++.+|| |++ |.|+.||++|++++++
T Consensus 2 ~p~~f~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~pg~~~~pH-h~~-a~E~~yVl~G~~~v~v 76 (178)
T 1dgw_A 2 NPYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLRD--YRVLEYCSKPNTLLLPH-HSD-SDLLVLVLEGQAILVL 76 (178)
T ss_dssp CTTEECGGGEEEEE-EETTEEEEEECCTTSSCGGGGGGTT--EEEEEEEECTTEEEEEE-EES-SEEEEEEEESEEEEEE
T ss_pred CCceechhhcccce-EcCCCEEEEEcccCCcchhcCCcCc--EEEEEEEecCCcEecCc-CCC-CCEEEEEEeEEEEEEE
Confidence 56889988877655 588999999888 56888774 88999999999999999 998 9999999999999999
Q ss_pred EccCCceEEEEEecCCcEEEEcCCcEEEEee-CCC-CeEEEEE-EcCCCCc---eeccccc---cccccCCCHHHHHHHc
Q 018395 261 VGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPD-GLAWFSI-ITTPNPI---FTHLAGS---IGTWKSLSPSVLEAAF 331 (356)
Q Consensus 261 v~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~-~~~~~~~-~~~~~p~---~~~laG~---~s~l~~~p~~vl~~af 331 (356)
+++++.+ ..+|++||+++||+|.+|++.| +++ .++++++ .++++|+ ..+++|. ++||+++|++||+++|
T Consensus 77 ~~~~~~~--~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~~~p~~vla~af 154 (178)
T 1dgw_A 77 VNPDGRD--TYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSAFSKNFLEASY 154 (178)
T ss_dssp EETTEEE--EEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGGSCHHHHHHHH
T ss_pred EeCCCcE--EEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhhhCCHHHHHHHH
Confidence 9988755 4589999999999999999955 665 7888887 4555665 5568888 7999999999999999
Q ss_pred CCCHHHHHHHH-hcCCCeEEec
Q 018395 332 NVPSDVEKQFR-SKRANEAIFF 352 (356)
Q Consensus 332 ~~~~~~~~~l~-~~~~~~~~~~ 352 (356)
+++.+++++|+ .++++..|+.
T Consensus 155 ~v~~~~~~~l~~~~~~~~~iv~ 176 (178)
T 1dgw_A 155 DSPYDEIEQTLLQEEQEGVIVK 176 (178)
T ss_dssp TSCHHHHHHHTTSCCSSSSEEE
T ss_pred CcCHHHHHHHhcCcCcCceEEE
Confidence 99999999999 4456666664
No 21
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.95 E-value=1e-27 Score=236.24 Aligned_cols=156 Identities=17% Similarity=0.270 Sum_probs=139.6
Q ss_pred cceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCc-----------
Q 018395 11 KQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKE----------- 78 (356)
Q Consensus 11 ~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~----------- 78 (356)
.+.+.+.+|++..+++.++|.|++.+++++++.|.||+++.|||| +|.||+||++|+++++++++++.
T Consensus 223 ~p~~~~~~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~ 302 (416)
T 1uij_A 223 NPIYSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPL 302 (416)
T ss_dssp CCSEECSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC------------C
T ss_pred CCCccCCCceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCcccccccccccc
Confidence 467899999999999999999999999999999999999999999 99999999999999999998762
Q ss_pred ---eEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecc-cccccccCcHHHHHhhccCCHH
Q 018395 79 ---EKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTG-ANGIFTGFSTEFVSRAWDLDEN 154 (356)
Q Consensus 79 ---~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag-~~s~l~~~~~~vl~~af~~~~~ 154 (356)
....+|++|||++||+|++||+.|. +++.++++++++ ++|+ ..+||| ..+||+++|++||+++|+++.+
T Consensus 303 ~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~--~~~~---~~~laG~~~sv~~~~p~~vla~af~~~~~ 375 (416)
T 1uij_A 303 EVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINA--ENNQ---RNFLAGEKDNVVRQIERQVQELAFPGSAQ 375 (416)
T ss_dssp CEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETC--TTCC---EEESSSSTTBSGGGSCHHHHHHHSSSCHH
T ss_pred ceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCC--CCCc---ceecccchhhHHHhCCHHHHHHHHCcCHH
Confidence 3345999999999999999999998 579999988765 4564 678998 6899999999999999999999
Q ss_pred HHHHhhcccCCceEEEcCC
Q 018395 155 TVKTLVGKQTGKGIVKLDA 173 (356)
Q Consensus 155 ~~~~l~~~q~~~~iv~~~~ 173 (356)
++++|+++|++.+|+....
T Consensus 376 ~v~~l~~~~~~~~~~~~~~ 394 (416)
T 1uij_A 376 DVERLLKKQRESYFVDAQP 394 (416)
T ss_dssp HHHHHTTSCCSCSEEEC--
T ss_pred HHHHHHhcCCccEEECCcc
Confidence 9999999999889997653
No 22
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.95 E-value=1.2e-27 Score=236.67 Aligned_cols=157 Identities=18% Similarity=0.237 Sum_probs=141.2
Q ss_pred ccccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCc-eEEEEEc
Q 018395 8 KLAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKE-EKVVAIK 85 (356)
Q Consensus 8 ~~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~-~~~~~l~ 85 (356)
....+++.+.+|++..+++.++|.|+..++++++++|.||+|++|||| +|+||+||++|+++++++++++. ..+.+|+
T Consensus 294 p~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~ 373 (465)
T 3qac_A 294 PSKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELS 373 (465)
T ss_dssp TTTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred cccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEec
Confidence 355688899999999999999999999999999999999999999999 99999999999999999998753 4466799
Q ss_pred CCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCC
Q 018395 86 KGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTG 165 (356)
Q Consensus 86 ~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~ 165 (356)
+|||++||+|++|++. .+++++++++++++ .+|+ ..+|||.++||+++|++||++||+++.+++++|++++++
T Consensus 374 ~GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s---~np~---~~~LaG~~sv~~~ip~eVla~aF~v~~e~v~~Lk~~~~e 446 (465)
T 3qac_A 374 RGQLVVVPQNFAIVKQ-AFEDGFEWVSFKTS---ENAM---FQSLAGRTSAIRSLPIDVVSNIYQISREEAFGLKFNRPE 446 (465)
T ss_dssp TTCEEEECTTCEEEEE-EEEEEEEEEEEESS---TTCC---EEESSSSSBHHHHSCHHHHHHHHTCCHHHHHHHHHSCCS
T ss_pred CCeEEEECCCcEEEEE-cCCCCeEEEEEecC---CCCc---ccccccchhhhhhCCHHHHHHHhCCCHHHHHHHHhccCc
Confidence 9999999999999986 56788999987654 3564 667999899999999999999999999999999999999
Q ss_pred ceEEEc
Q 018395 166 KGIVKL 171 (356)
Q Consensus 166 ~~iv~~ 171 (356)
.+|+..
T Consensus 447 ~~i~~~ 452 (465)
T 3qac_A 447 TTLFRS 452 (465)
T ss_dssp CSEECC
T ss_pred cEEECC
Confidence 898853
No 23
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.95 E-value=1.6e-27 Score=236.73 Aligned_cols=157 Identities=18% Similarity=0.242 Sum_probs=141.0
Q ss_pred cccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCce-EEEEEcC
Q 018395 9 LAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEE-KVVAIKK 86 (356)
Q Consensus 9 ~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~-~~~~l~~ 86 (356)
...+.+.+.+|++..+++.++|.|+..+++++++.|.||+++.|||| +|+||+||++|+++++++++++.. ...+|++
T Consensus 294 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~ 373 (459)
T 2e9q_A 294 ERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVRE 373 (459)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeC
Confidence 34467889999999999999999999999999999999999999999 999999999999999999987643 2346999
Q ss_pred CCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCc
Q 018395 87 GDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGK 166 (356)
Q Consensus 87 GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~ 166 (356)
|||++||+|++|++.| +++++++++++++. +| ...+|+|..+||+++|++||+++|+++.+++++|++++++.
T Consensus 374 GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~---~~---~~~~laG~~s~~~~~p~~Vla~af~v~~~~v~~l~~~~~e~ 446 (459)
T 2e9q_A 374 GQVLMIPQNFVVIKRA-SDRGFEWIAFKTND---NA---ITNLLAGRVSQMRMLPLGVLSNMYRISREEAQRLKYGQQEM 446 (459)
T ss_dssp TCEEEECTTCEEEEEE-EEEEEEEEEEESSS---SC---CEEESSSSSSHHHHSCHHHHHHHHTCCHHHHHHHHHSCCSC
T ss_pred CcEEEECCCCEEEEEe-CCCCeEEEEEecCC---CC---cceeecchhHHHHhCCHHHHHHHHCcCHHHHHHHHhcCCcc
Confidence 9999999999999999 67889999987653 45 47789998999999999999999999999999999998888
Q ss_pred eEEEcC
Q 018395 167 GIVKLD 172 (356)
Q Consensus 167 ~iv~~~ 172 (356)
+|+...
T Consensus 447 ~i~~~~ 452 (459)
T 2e9q_A 447 RVLSPG 452 (459)
T ss_dssp SEECSC
T ss_pred EEeCCC
Confidence 888543
No 24
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.95 E-value=3.8e-27 Score=234.38 Aligned_cols=155 Identities=15% Similarity=0.236 Sum_probs=138.4
Q ss_pred cccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCC-ceEEEEEcC
Q 018395 9 LAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEK-EEKVVAIKK 86 (356)
Q Consensus 9 ~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~-~~~~~~l~~ 86 (356)
...+++.+.+|++..+++.+||.|+..++++++++|.||++++|||| +|+||+||++|+++++++++++ +..+.+|++
T Consensus 366 s~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~ 445 (531)
T 3fz3_A 366 ERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQ 445 (531)
T ss_dssp GGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecC
Confidence 44578889999999999999999999999999999999999999999 9999999999999999999865 345789999
Q ss_pred CCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCc
Q 018395 87 GDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGK 166 (356)
Q Consensus 87 GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~ 166 (356)
|||++||+|++|+..+ +++.++|+++ +++ .+|+ ..+|+|..+||+++|++||+++|+++.+++++|++++++.
T Consensus 446 GDV~v~P~G~~H~~~a-g~e~l~flaF-~ss--~np~---~~~LaG~~svf~~lP~eVLa~aF~v~~e~v~kLk~~~~es 518 (531)
T 3fz3_A 446 GQLFIVPQNHGVIQQA-GNQGFEYFAF-KTE--ENAF---INTLAGRTSFLRALPDEVLANAYQISREQARQLKYNRQET 518 (531)
T ss_dssp TCEEEECTTCEEEEEE-EEEEEEEEEE-ESS--TTCC---EEESSSTTCHHHHSCHHHHHHHHTCCHHHHHHHHHSCCCS
T ss_pred CeEEEECCCCeEEEec-CCCCEEEEEE-ecC--CCCc---ceeccchhHHHHhCCHHHHHHHhCcCHHHHHHHHhcCCCc
Confidence 9999999999998764 5778999864 443 4564 5589998899999999999999999999999999999998
Q ss_pred eEEE
Q 018395 167 GIVK 170 (356)
Q Consensus 167 ~iv~ 170 (356)
+|+.
T Consensus 519 ~i~~ 522 (531)
T 3fz3_A 519 IALS 522 (531)
T ss_dssp SEEC
T ss_pred eEEC
Confidence 8884
No 25
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.95 E-value=4.3e-27 Score=232.74 Aligned_cols=158 Identities=16% Similarity=0.307 Sum_probs=141.0
Q ss_pred ccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCc----------
Q 018395 10 AKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKE---------- 78 (356)
Q Consensus 10 ~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~---------- 78 (356)
.++.+.+++|+++.+++.++|.|++.++++++++|.||+++.|||| +|.||+||++|+++++++++++.
T Consensus 239 ~~p~~~~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~ 318 (434)
T 2ea7_A 239 SKPIYSNKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESL 318 (434)
T ss_dssp SCCSEEETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCE
T ss_pred CCCceeCCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCc
Confidence 3467889999999999999999999999999999999999999999 99999999999999999998541
Q ss_pred ---eEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecc-cccccccCcHHHHHhhccCCHH
Q 018395 79 ---EKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTG-ANGIFTGFSTEFVSRAWDLDEN 154 (356)
Q Consensus 79 ---~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag-~~s~l~~~~~~vl~~af~~~~~ 154 (356)
....+|++|||++||+|++||+.|. +++.+++++.++ .+++ ..+||| ..+||+++|++||+++|+++.+
T Consensus 319 ~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~--~~~~---~~~laG~~~sv~~~~p~~vla~af~v~~~ 391 (434)
T 2ea7_A 319 EVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINA--ENNR---RNFLAGGKDNVMSEIPTEVLEVSFPASGK 391 (434)
T ss_dssp EEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETC--TTCC---EEESSSSTTBGGGGSCHHHHHHHSSSCHH
T ss_pred ceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCC--CCCC---ceecccchhhhhhhCCHHHHHHHHCcCHH
Confidence 2344999999999999999999998 469999988765 4553 678998 6899999999999999999999
Q ss_pred HHHHhhcccCCceEEEcCCC
Q 018395 155 TVKTLVGKQTGKGIVKLDAN 174 (356)
Q Consensus 155 ~~~~l~~~q~~~~iv~~~~~ 174 (356)
++++|+++|++.+|+...++
T Consensus 392 ~v~~l~~~~~e~~~~~~~~~ 411 (434)
T 2ea7_A 392 KVEKLIKKQSESHFVDAQPE 411 (434)
T ss_dssp HHHHHHTTCCSCSEEECCCC
T ss_pred HHHHHHhcCCccEEECCCch
Confidence 99999999998999976533
No 26
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.94 E-value=6.1e-27 Score=232.21 Aligned_cols=156 Identities=17% Similarity=0.252 Sum_probs=139.6
Q ss_pred ccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCC---------c-
Q 018395 10 AKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEK---------E- 78 (356)
Q Consensus 10 ~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~---------~- 78 (356)
.++.+.+++|++..+++.++|.|++.++++++++|.||++++|||| +|+||+||++|+++++++++++ +
T Consensus 254 ~~p~~~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~ 333 (445)
T 2cav_A 254 RDPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQL 333 (445)
T ss_dssp SCCSEESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CC
T ss_pred cCCCccCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcce
Confidence 3467889999999999999999999999999999999999999999 9999999999999999999874 2
Q ss_pred -eEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecc-cccccccCcHHHHHhhccCCHHHH
Q 018395 79 -EKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTG-ANGIFTGFSTEFVSRAWDLDENTV 156 (356)
Q Consensus 79 -~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag-~~s~l~~~~~~vl~~af~~~~~~~ 156 (356)
..+.+|++|||++||+|++|++.|. +++.++++..++ ++|+ ..+||| ..+||+++|++||+++|+++.+++
T Consensus 334 ~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~--~~~~---~~~laG~~~sv~~~~p~~vla~af~v~~~~v 406 (445)
T 2cav_A 334 RRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNA--ENNE---RNFLAGHKENVIRQIPRQVSDLTFPGSGEEV 406 (445)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESC--TTCC---EEESSSSTTBSGGGSCHHHHHHHSSSCHHHH
T ss_pred EEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccC--CCCC---cEEcccchhhhhhhCCHHHHHHHHCcCHHHH
Confidence 3578899999999999999999998 469999876644 4554 678998 789999999999999999999999
Q ss_pred HHhhcccCCceEEEcC
Q 018395 157 KTLVGKQTGKGIVKLD 172 (356)
Q Consensus 157 ~~l~~~q~~~~iv~~~ 172 (356)
++|+++|++.+|+...
T Consensus 407 ~~l~~~~~e~~~~~~~ 422 (445)
T 2cav_A 407 EELLENQKESYFVDGQ 422 (445)
T ss_dssp HHHHHHCCSCSEEECC
T ss_pred HHHHhcCCccEEeCCc
Confidence 9999999988998764
No 27
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.94 E-value=5.7e-26 Score=203.20 Aligned_cols=163 Identities=20% Similarity=0.303 Sum_probs=142.9
Q ss_pred CCcccCCCceeec-cCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEE
Q 018395 180 PKKEHRDGMAFNC-EEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRA 258 (356)
Q Consensus 180 p~~~~~~~~~~~l-~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~ 258 (356)
|.....+++.|++ ..+++++.+..|+.++.++..++|.++++++++.++++.||++..||||++ +.|+.||++|++++
T Consensus 28 ~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l~pg~~~~~H~H~~-~~E~~~Vl~G~~~v 106 (201)
T 1fi2_A 28 PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPR-ATEIGMVMKGELLV 106 (201)
T ss_dssp CGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEEECTTCEEEEEECTT-CCEEEEEEESEEEE
T ss_pred cCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEEECCCCCCCCeECCC-CCEEEEEEeCEEEE
Confidence 4444456789997 667776655668889999999999999999999999999999999999998 99999999999999
Q ss_pred EEEccC--CceEEEEEecCCcEEEEcCCcEEEE-eeCCCCeEEEEEEcCCCCceeccccccccccC---CCHHHHHHHcC
Q 018395 259 QIVGPD--GKRVLETTVKAGNLFIVPRFYVVSK-IADPDGLAWFSIITTPNPIFTHLAGSIGTWKS---LSPSVLEAAFN 332 (356)
Q Consensus 259 ~iv~~~--g~~~~~~~l~~Gdv~vvP~g~~h~~-~~~~~~~~~~~~~~~~~p~~~~laG~~s~l~~---~p~~vl~~af~ 332 (356)
++.+++ |.+++...|++||+++||+|.+|++ +.++++++++.++++++|+...++ .++++. +|++||+++|+
T Consensus 107 ~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~~~~~~--~~~~~~~~~~~~~vl~~af~ 184 (201)
T 1fi2_A 107 GILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVP--LTLFGSDPPIPTPVLTKALR 184 (201)
T ss_dssp EEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCCCEEHH--HHHHHCSSCCCHHHHHHHHT
T ss_pred EEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCCeEehh--hHHhcCCCCCCHHHHHHHHC
Confidence 999765 2455678999999999999999999 457889999999999999988876 567776 99999999999
Q ss_pred CCHHHHHHHHhcC
Q 018395 333 VPSDVEKQFRSKR 345 (356)
Q Consensus 333 ~~~~~~~~l~~~~ 345 (356)
++.+++++|+++.
T Consensus 185 ~~~~~v~~l~~~~ 197 (201)
T 1fi2_A 185 VEAGVVELLKSKF 197 (201)
T ss_dssp SCHHHHHHHHHHS
T ss_pred cCHHHHHHHHHhh
Confidence 9999999999875
No 28
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.94 E-value=1.7e-25 Score=223.73 Aligned_cols=156 Identities=18% Similarity=0.249 Sum_probs=139.4
Q ss_pred cccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCc-eEEEEEcC
Q 018395 9 LAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKE-EKVVAIKK 86 (356)
Q Consensus 9 ~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~-~~~~~l~~ 86 (356)
...+++.+++|++..++..++|.|+..++++++++|+||++.+|||| +++||+||++|+++++++++++. ....+|++
T Consensus 344 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~ 423 (510)
T 3c3v_A 344 RSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQE 423 (510)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcC
Confidence 34467899999999999999999999899999999999999999999 89999999999999999988653 33456999
Q ss_pred CCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCc
Q 018395 87 GDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGK 166 (356)
Q Consensus 87 GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~ 166 (356)
||+++||+|++|++.| ++++++++++..+. +|+ ..+|+|..+||+++|.+||+++|+++.+++++|+.++++.
T Consensus 424 GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~---~p~---~~~LaG~~svf~~lp~eVla~aF~v~~e~v~~L~~~~~e~ 496 (510)
T 3c3v_A 424 GHVLVVPQNFAVAGKS-QSDNFEYVAFKTDS---RPS---IANLAGENSVIDNLPEEVVANSYGLPREQARQLKNNNPFK 496 (510)
T ss_dssp TCEEEECTTCEEEEEE-CSSEEEEEEEESSS---SCC---EEESSSTTSTTTTSCHHHHHHHHTCCHHHHHHHHHSCCCS
T ss_pred CcEEEECCCCeEEEEe-CCCCEEEEEEECCC---Ccc---eeecccHhHHHHhCCHHHHHHHHCcCHHHHHHHHhhCCCc
Confidence 9999999999999999 78889999877542 453 6789998999999999999999999999999999988888
Q ss_pred eEEEc
Q 018395 167 GIVKL 171 (356)
Q Consensus 167 ~iv~~ 171 (356)
+|+..
T Consensus 497 ~i~~p 501 (510)
T 3c3v_A 497 FFVPP 501 (510)
T ss_dssp SEECC
T ss_pred EEECC
Confidence 88854
No 29
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.93 E-value=2.5e-25 Score=222.05 Aligned_cols=155 Identities=18% Similarity=0.262 Sum_probs=138.9
Q ss_pred ccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCc-eEEEEEcCC
Q 018395 10 AKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKE-EKVVAIKKG 87 (356)
Q Consensus 10 ~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~-~~~~~l~~G 87 (356)
..+++.+++|++..++..++|.|+..++++++++|+||++.+|||| +++|++||++|+++++++++++. ....+|++|
T Consensus 311 ~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~G 390 (476)
T 1fxz_A 311 SPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEG 390 (476)
T ss_dssp CCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETT
T ss_pred cCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCC
Confidence 3467899999999999999999999999999999999999999999 89999999999999999987653 334569999
Q ss_pred CEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCce
Q 018395 88 DGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKG 167 (356)
Q Consensus 88 Dv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~ 167 (356)
|+++||+|++|++.| ++++++++++..+. +|+ ..+|+|..+||+++|.+||+++|+++.+++++|++++++.+
T Consensus 391 Dv~viP~G~~H~~~n-g~~~l~~l~f~~s~---~p~---~~~laG~~s~~~~~p~~Vla~af~~~~~~v~~l~~~~~e~~ 463 (476)
T 1fxz_A 391 RVLIVPQNFVVAARS-QSDNFEYVSFKTND---TPM---IGTLAGANSLLNALPEEVIQHTFNLKSQQARQIKNNNPFKF 463 (476)
T ss_dssp CEEEECTTCEEEEEE-CSTTEEEEEEESSS---SCC---EEESSSTTCTGGGSCHHHHHHHHTCCHHHHHHHHHSCCCSS
T ss_pred CEEEECCCCeEEEEe-CCCCEEEEEEECCC---CCc---eeEccchhHHHHhCCHHHHHHHhCcCHHHHHHHHhhCCCcE
Confidence 999999999999999 78889999987542 453 56899989999999999999999999999999999888888
Q ss_pred EEEc
Q 018395 168 IVKL 171 (356)
Q Consensus 168 iv~~ 171 (356)
|+..
T Consensus 464 i~~p 467 (476)
T 1fxz_A 464 LVPP 467 (476)
T ss_dssp EECC
T ss_pred EeCC
Confidence 8854
No 30
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.93 E-value=8.2e-26 Score=220.64 Aligned_cols=149 Identities=17% Similarity=0.261 Sum_probs=134.1
Q ss_pred ceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcC------CC-ceEEEE
Q 018395 12 QVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLP------EK-EEKVVA 83 (356)
Q Consensus 12 ~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~------~~-~~~~~~ 83 (356)
+.+.+++|+++.+++.+ .++++++++|.||++..|||| +|+||+||++|+++++++++ ++ +..+.+
T Consensus 220 p~~~n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~ 293 (397)
T 2phl_A 220 NTIGNEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAE 293 (397)
T ss_dssp CEEEETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEE
T ss_pred CcccCCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEE
Confidence 77899999999998865 789999999999999999999 99999999999999999997 33 566789
Q ss_pred EcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecc-cccccccCc-----HHHHHhhccCCHHHHH
Q 018395 84 IKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTG-ANGIFTGFS-----TEFVSRAWDLDENTVK 157 (356)
Q Consensus 84 l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag-~~s~l~~~~-----~~vl~~af~~~~~~~~ 157 (356)
|++||+++||+|++|++.|.+ +++++++..++ .+|+ ..+||| ..+||+++| ++||+++|++++++++
T Consensus 294 l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s--~~~~---~~~laG~~~sv~~~~p~~~~~~eVla~af~v~~~~v~ 366 (397)
T 2phl_A 294 LSKDDVFVIPAAYPVAIKATS--NVNFTGFGINA--NNNN---RNLLAGKTDNVISSIGRALDGKDVLGLTFSGSGDEVM 366 (397)
T ss_dssp EETTCEEEECTTCCEEEEESS--SEEEEEEEESC--TTCC---EEESSSSSSBHHHHHHTSTTHHHHHHHHSSSCHHHHH
T ss_pred ecCCCEEEECCCCeEEEEeCC--CeEEEEEECCC--CCCc---ceecccchhhHHhhCCCccchHHHHHHHhCcCHHHHH
Confidence 999999999999999999986 69999987765 4564 678998 689999999 9999999999999999
Q ss_pred HhhcccCCceEEEcCC
Q 018395 158 TLVGKQTGKGIVKLDA 173 (356)
Q Consensus 158 ~l~~~q~~~~iv~~~~ 173 (356)
+|+++|++.+|+...+
T Consensus 367 ~l~~~~~e~~i~~~~~ 382 (397)
T 2phl_A 367 KLINKQSGSYFVDAHH 382 (397)
T ss_dssp HHHTTCCCCSEEECC-
T ss_pred HHHhcCCccEEeCCCc
Confidence 9999998889997643
No 31
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.91 E-value=5.1e-24 Score=213.22 Aligned_cols=151 Identities=21% Similarity=0.348 Sum_probs=133.2
Q ss_pred cccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCce-EEEEEcC
Q 018395 9 LAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEE-KVVAIKK 86 (356)
Q Consensus 9 ~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~-~~~~l~~ 86 (356)
.+.+++.+.+|++..++..++|.|+..++++++++|.||++..|||| +++|++||++|+++++++++++.. ....|++
T Consensus 339 ~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~ 418 (493)
T 2d5f_A 339 SRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRR 418 (493)
T ss_dssp GGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred CCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcC
Confidence 45577889999999999999999999999999999999999999999 899999999999999999876442 3356999
Q ss_pred CCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCc
Q 018395 87 GDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGK 166 (356)
Q Consensus 87 GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~ 166 (356)
||+++||+|++|++.|. ++++++++++.+ .+|+ ..+| .+||+++|++||+++|+++.+++++|++++++.
T Consensus 419 GDv~vvP~G~~H~~~n~-~e~~~~l~~~ts---~~p~---~~~l---~s~~~~~p~eVla~aF~v~~~~v~~l~~~~~e~ 488 (493)
T 2d5f_A 419 GQLLVVPQNFVVAEQGG-EQGLEYVVFKTH---HNAV---SSYI---KDVFRAIPSEVLSNSYNLGQSQVRQLKYQGNSG 488 (493)
T ss_dssp TCEEEECTTCEEEEEEE-EEEEEEEEEESS---TTCC---EEEH---HHHHHHSCHHHHHHHHTCCHHHHHHHHHSSCSS
T ss_pred CCEEEECCCCeEeeeeC-CCCEEEEEEECC---CCCc---ceeH---HHHHHhCCHHHHHHHHCcCHHHHHHHHhcCCCc
Confidence 99999999999999984 578999998754 4564 3344 589999999999999999999999999999888
Q ss_pred eEE
Q 018395 167 GIV 169 (356)
Q Consensus 167 ~iv 169 (356)
+|+
T Consensus 489 ~i~ 491 (493)
T 2d5f_A 489 PLV 491 (493)
T ss_dssp SEE
T ss_pred eec
Confidence 876
No 32
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.91 E-value=2.4e-23 Score=201.51 Aligned_cols=229 Identities=18% Similarity=0.162 Sum_probs=159.0
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEe
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLG 114 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~ 114 (356)
..+.+..++|+||+...+|+|..+|++||++|++.++.++ + +.+.+++||++++|+|..|++.|.++++++++++.
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t~v~--g--~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~ 173 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHNQSALRFIVEGKGAFTAVD--G--ERTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGL 173 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEESSCEEEEEEECSSCEEEET--T--EEEECCTTCEEEECTTSCEEEECCSSSCEEEEEEE
T ss_pred CcEEEEEEEECCCCCcCCeecCcceEEEEEEEEEEEEEEC--C--EEEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 4678999999999999999998889999999999885453 3 34899999999999999999999999999998876
Q ss_pred eCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCceEEEcCCCCcCCCCCcccCCCceeeccC
Q 018395 115 DTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKGIVKLDANAKLPEPKKEHRDGMAFNCEE 194 (356)
Q Consensus 115 ~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~iv~~~~~~~~~~p~~~~~~~~~~~l~~ 194 (356)
+.. .++ ++ + ..+...++.++... ..+..+..++.. ..++..+.. . .+. ..-+.|++..
T Consensus 174 d~p------~~~--~l-~-~~~~~~~~~~~~~~--~~p~~~~~~~~~----~~~~p~~~~-~--~~~---sp~~~y~~~~ 231 (354)
T 2d40_A 174 DLP------LVN--IL-G-CGFAEDYPEEQQPV--TRKEGDYLPRYA----ANMLPLRHQ-T--GNS---SPIFNYRYDR 231 (354)
T ss_dssp CHH------HHH--HH-T-CCCEEECC--CCCC--CSCTTTHHHHHS----SSEECSSCC-C--CSS---CSCCEECHHH
T ss_pred Cch------hHh--hc-C-ceeeecCccccCcC--cCCcchhhhhhc----cCCCCcccc-c--cCC---CcceeccHHH
Confidence 532 111 11 1 12233344443221 122222222221 123332211 0 000 1113444432
Q ss_pred C-----------CCCcccCCCcEEEEeCCC-CCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEc
Q 018395 195 A-----------PLDVDIKNGGRVVLLNTK-NLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVG 262 (356)
Q Consensus 195 ~-----------~~~~~~~~gG~~~~~~~~-~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~ 262 (356)
. +++ ...|+.+..+++. .++.+.+ |++..+.|.||++..||||+. + ||.||++|+++++|
T Consensus 232 ~~~~l~~~~~~~~~~--~~~G~~~~~~np~t~~~~~~t--i~~~~~~l~pG~~~~~H~h~~-~-ev~~v~~G~g~~~v-- 303 (354)
T 2d40_A 232 SREVLHDLTRLGDAD--EWDGYKMRYVNPVTGGYPMPS--MGAFLQLLPKGFASRVARTTD-S-TIYHVVEGSGQVII-- 303 (354)
T ss_dssp HHHHHHHHHTTSCCB--TTTBEEEEECCTTTSSCSSSS--CEEEEEEECTTCBCCCBEESS-C-EEEEEEEEEEEEEE--
T ss_pred HHHHHHhhhhccccC--CCCCeEEEEeCCCcCCCCCCc--ceeEEEEECCCCCCCceecCC-c-EEEEEEeCeEEEEE--
Confidence 1 222 2457788888854 6788877 557788999999999999997 6 99999999999998
Q ss_pred cCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEE
Q 018395 263 PDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSII 302 (356)
Q Consensus 263 ~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~ 302 (356)
+| + +.++++||+++||++.+|++.| ++++.++++.
T Consensus 304 -~~-~--~~~~~~GD~~~vP~~~~H~~~n-~e~~~l~~~~ 338 (354)
T 2d40_A 304 -GN-E--TFSFSAKDIFVVPTWHGVSFQT-TQDSVLFSFS 338 (354)
T ss_dssp -TT-E--EEEEETTCEEEECTTCCEEEEE-EEEEEEEEEE
T ss_pred -CC-E--EEEEcCCCEEEECCCCeEEEEe-CCCEEEEEEc
Confidence 33 3 3579999999999999999966 3678888885
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.89 E-value=8.1e-24 Score=160.40 Aligned_cols=78 Identities=13% Similarity=0.218 Sum_probs=72.7
Q ss_pred ceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCce
Q 018395 188 MAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKR 267 (356)
Q Consensus 188 ~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~ 267 (356)
.+|||.+++|++ ++..|+++++++.+||+|++||||+++++|.+|||++|||||+ |+||+||++|+++++|||++|++
T Consensus 2 ~pfnl~~~~p~~-~n~~G~~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hpr-A~ei~~V~~G~~~v~~V~~~g~~ 79 (79)
T 1dgw_X 2 KPFNLRSRDPIY-SNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSR-ATVILVANEGRAEVELVGLEQQQ 79 (79)
T ss_dssp CCEETTSSCCSE-ECSSEEEEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESS-CEEEEEEEESCEEEEEEEEC---
T ss_pred CccccccCCCCc-cCCCCcEEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCC-CcEEEEEEeceEEEEEecCCCCC
Confidence 479999999997 6899999999999999999999999999999999999999999 99999999999999999999853
No 34
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.87 E-value=1.4e-21 Score=174.62 Aligned_cols=141 Identities=18% Similarity=0.305 Sum_probs=121.4
Q ss_pred eCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCC---CceEEEEEcCCCEE
Q 018395 15 GGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPE---KEEKVVAIKKGDGI 90 (356)
Q Consensus 15 ~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~---~~~~~~~l~~GDv~ 90 (356)
...|+.+..++..++|.+++.++++.++++.||++..|||| +++|++||++|++++++++.+ ++...+.|++||++
T Consensus 50 ~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~ 129 (201)
T 1fi2_A 50 TPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETF 129 (201)
T ss_dssp STTSEEEEEESTTTCGGGTTSSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEE
T ss_pred CCCCcEEEEEecccCCCcccCceEEEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEE
Confidence 34567788889889999999999999999999999999999 689999999999999998654 44446899999999
Q ss_pred EeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeeccccccccc---CcHHHHHhhccCCHHHHHHhhccc
Q 018395 91 ALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTG---FSTEFVSRAWDLDENTVKTLVGKQ 163 (356)
Q Consensus 91 ~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~---~~~~vl~~af~~~~~~~~~l~~~q 163 (356)
+||+|.+|++.|.+++++++++++.. .+|+.+ .++ .++|+. +++++|+++|+++.+++++|+++.
T Consensus 130 ~iP~g~~H~~~N~g~~~~~~l~v~~~---~~p~~~---~~~--~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~ 197 (201)
T 1fi2_A 130 VIPRGLMHFQFNVGKTEAYMVVSFNS---QNPGIV---FVP--LTLFGSDPPIPTPVLTKALRVEAGVVELLKSKF 197 (201)
T ss_dssp EECTTCCEEEEECSSSCEEEEEEESS---SCCCCE---EHH--HHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHS
T ss_pred EECCCCeEEEEeCCCCCEEEEEEECC---CCCCeE---ehh--hHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhh
Confidence 99999999999999999999998754 356533 343 467886 999999999999999999998654
No 35
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.85 E-value=1.5e-19 Score=172.92 Aligned_cols=244 Identities=11% Similarity=0.040 Sum_probs=147.9
Q ss_pred cCceEEEEEEecCCCcccCeeeC-CCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYCD-SARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h~-a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
+..+.+..+++.||+...+|||. .+|++||++|++++.+ ++ ..+.|++||++++|+|.+|.+.|.++ ++++++
T Consensus 43 ~~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~---~~--~~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~ 116 (337)
T 1y3t_A 43 GDLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL---DG--ERYLLISGDYANIPAGTPHSYRMQSH-RTRLVS 116 (337)
T ss_dssp TSSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE---TT--EEEEECTTCEEEECTTCCEEEEECST-TEEEEE
T ss_pred CCeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE---CC--EEEEECCCCEEEECCCCcEEEEECCC-CeEEEE
Confidence 35789999999999999999995 9999999999999986 33 34899999999999999999999987 588888
Q ss_pred EeeCCCCCCCCceeEEeecccccccccC-cHHHHHhhccCCHHHHHHhhcccCCceEEEcCCCCc-CCCC-Ccc---cCC
Q 018395 113 LGDTSKGHKAGEFTNFFLTGANGIFTGF-STEFVSRAWDLDENTVKTLVGKQTGKGIVKLDANAK-LPEP-KKE---HRD 186 (356)
Q Consensus 113 i~~~~~~~~pg~~~~f~lag~~s~l~~~-~~~vl~~af~~~~~~~~~l~~~q~~~~iv~~~~~~~-~~~p-~~~---~~~ 186 (356)
++... .++.||......+-+.. |..+.. ..+.+.+.++. ...+..+ ...... ...| ... ...
T Consensus 117 ~~~p~------~~~~~~~~~~~~~~~~~~p~~~~~---~~~~~~l~~~a--~~~gv~~-~~~~~~~~~~~~~~~~~l~~~ 184 (337)
T 1y3t_A 117 YTMKG------NVAHLYSVIGNPYDHAEHPPYASE---EVSNERFAEAA--AVATIVF-LDEAKPACSAKLAELTELPDG 184 (337)
T ss_dssp EEETT------SSTHHHHHHSEECSCSSCCSSCCC---CCTTCTTGGGT--SSCEECC-CCCCCSSCSCEECCBCSCCSS
T ss_pred EECCC------CHHHHHHHhCcccccccCCCCCCc---ccCHHHHHHhH--hhccEEE-cCCCCccccccchhhhcCCCC
Confidence 87643 33344432222222221 211000 11111112211 1111111 010000 0000 000 001
Q ss_pred CceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecC-CCeecccccccCCeeEEEEEeceEEEEEEccCC
Q 018395 187 GMAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDG-KAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDG 265 (356)
Q Consensus 187 ~~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~-g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g 265 (356)
..++-+...+...+...+..++.+... ......+ ...+.+.| |+...+|||+. +.|+.||++|++++.+ ++
T Consensus 185 ~~~~v~r~~~~~~~~~~g~~~~~l~~~---~~~~~~~-~~~~~~~p~g~~~~~h~H~~-~~e~~~vl~G~~~~~i---~~ 256 (337)
T 1y3t_A 185 AVPYVLESGEGDRLLTGDQLHRIVAAQ---KNTDGQF-IVVSSEGPKGDRIVDHYHEY-HTETFYCLEGQMTMWT---DG 256 (337)
T ss_dssp SCCEEECTTCSEEEEETTEEEEEEECG---GGTTTSC-EEEEEEECSCCCCCCEECSS-CEEEEEEEESCEEEEE---TT
T ss_pred CCCEEECCCCcCEEEECCcEEEEEecc---cccCCcE-EEEEEEcCCCCCCCCcCCCC-CcEEEEEEeCEEEEEE---CC
Confidence 112223222221112334455555431 1222223 34456656 67778999997 8999999999999988 23
Q ss_pred ceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEcCCC
Q 018395 266 KRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPN 306 (356)
Q Consensus 266 ~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~~~~ 306 (356)
+ ...|++||+++||++.+|+..+..+.+.++.+++...
T Consensus 257 -~--~~~l~~GD~~~ip~~~~H~~~n~~~~~~~l~v~~~~~ 294 (337)
T 1y3t_A 257 -Q--EIQLNPGDFLHVPANTVHSYRLDSHYTKMVGVLVPGL 294 (337)
T ss_dssp -E--EEEECTTCEEEECTTCCEEEEECSSSEEEEEEEESST
T ss_pred -E--EEEECCCCEEEECCCCeEEEEECCCCeEEEEEEcCcc
Confidence 3 3579999999999999999955333888888876554
No 36
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.84 E-value=2.5e-20 Score=180.46 Aligned_cols=154 Identities=18% Similarity=0.252 Sum_probs=131.7
Q ss_pred CceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCc
Q 018395 187 GMAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGK 266 (356)
Q Consensus 187 ~~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~ 266 (356)
.+.|++...++.. ..+|+++.++..+||.+.+ +++.++.|.||++..||||++ +.|+.||++|++++++++++|+
T Consensus 20 ~~~~~~~~~~~~~--~~~G~~~~~~~~~~p~~~~--~~~~~~~l~pg~~~~~H~H~~-~~E~~yVl~G~~~~~v~~~~g~ 94 (361)
T 2vqa_A 20 AFTYAFSKTPLVL--YDGGTTKQVGTYNFPVSKG--MAGVYMSLEPGAIRELHWHAN-AAEWAYVMEGRTRITLTSPEGK 94 (361)
T ss_dssp CSEECGGGSCCEE--ETTEEEEEESTTTCTTCCS--CEEEEEEECTTCEEEEEECTT-CCEEEEEEESEEEEEEECTTSC
T ss_pred ceEEEcccCCcee--cCCceEEEeChhhCccccc--eeeEEEEEcCCCCCCceeCCC-CCEEEEEEEeEEEEEEEeCCCc
Confidence 4788998887753 5899999999999999885 689999999999999999998 9999999999999999998875
Q ss_pred eEEEEEecCCcEEEEcCCcEEEEee-CCCCeEEEEEEcCCCCceeccccccccccCCCHHHHHHHcCCCHHHHHHHHhcC
Q 018395 267 RVLETTVKAGNLFIVPRFYVVSKIA-DPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKR 345 (356)
Q Consensus 267 ~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~~~~~~~~~~p~~~~laG~~s~l~~~p~~vl~~af~~~~~~~~~l~~~~ 345 (356)
.. ...|++||+++||+|.+|++.| ++++++++.+++..++......+.+++++.+|.++|+++|+++.+.++++...+
T Consensus 95 ~~-~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~p~~vLa~~~~v~~~~~~~l~~~~ 173 (361)
T 2vqa_A 95 VE-IADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSVTDWLSHTPIAWVEENLGWTAAQVAQLPKKQ 173 (361)
T ss_dssp EE-EEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEHHHHHHTSCHHHHHHHHTCCHHHHTTSCSSC
T ss_pred EE-EEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecHhHHHHhCCHHHHHHHhCcCHHHHHhccccC
Confidence 32 3689999999999999999955 678999999988776643212234699999999999999999999999988654
Q ss_pred C
Q 018395 346 A 346 (356)
Q Consensus 346 ~ 346 (356)
.
T Consensus 174 ~ 174 (361)
T 2vqa_A 174 V 174 (361)
T ss_dssp C
T ss_pred c
Confidence 3
No 37
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.83 E-value=4.2e-19 Score=171.50 Aligned_cols=255 Identities=11% Similarity=-0.005 Sum_probs=151.8
Q ss_pred CceEEEEEEecCCCccc---Ceee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEE
Q 018395 35 GNIGAAKLALEKNGFAL---PHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVV 110 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~---pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~ 110 (356)
..+.+. .++.|++... +||| ..+|++||++|++++.+-..++....+.|++||++++|+|.+|++.|.+++. ++
T Consensus 46 ~~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~ 123 (350)
T 1juh_A 46 YAFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EM 123 (350)
T ss_dssp TSCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EE
T ss_pred CcEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EE
Confidence 356666 5666666554 8999 6999999999999998755334445689999999999999999999998875 88
Q ss_pred EEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCH--HHHHHhhc-ccCCceEEEcCCCCcC--CC---CCc
Q 018395 111 LFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDE--NTVKTLVG-KQTGKGIVKLDANAKL--PE---PKK 182 (356)
Q Consensus 111 l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~--~~~~~l~~-~q~~~~iv~~~~~~~~--~~---p~~ 182 (356)
++++.+. .++.||.......=+.+....+...|+.+. ...+++.. .++.++++..+..+.. .. +..
T Consensus 124 l~v~~p~------~~~~~f~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~a~~~ 197 (350)
T 1juh_A 124 TGVIVPG------GFEDLFYYLGTNATDTTHTPYIPSSSDSSSTTGPDSSTISTLQSFDVYAELSFTPRTDTVNGTAPAN 197 (350)
T ss_dssp EEEEESS------CTTHHHHHHSEECCCTTCCSSCCC--------------CGGGGGGTCEECTTCCCCCCCBTTEESSS
T ss_pred EEEEcCc------cHHHHHHHhccccccccccccCCcccccCccccCHHHHHHHHHHcCCEeccccCChhHhhccccccC
Confidence 8876643 234444331110000011233344554444 55667665 3555666654432211 00 001
Q ss_pred ccCCCceee-cc-CCCCCcccCCCcEEEE---------eCCCCCCCccccCceeEEEEecCC---CeecccccccCCeeE
Q 018395 183 EHRDGMAFN-CE-EAPLDVDIKNGGRVVL---------LNTKNLPLVGEVGCGADLVRLDGK---AMCSPGFSCDSALQV 248 (356)
Q Consensus 183 ~~~~~~~~~-l~-~~~~~~~~~~gG~~~~---------~~~~~~p~l~~l~~s~~~v~l~~g---~~~~PH~h~~~A~ei 248 (356)
..-....++ |. +.+|.+..++.|.... ..-...+..+.+..++..+.+.++ +....|.|+ ..++
T Consensus 198 ~~w~~~~~~~l~~~~~p~~~~~~~g~~~~~~~~g~v~~~~l~~~~~~~~~~f~~~~i~~~~~~~g~~~~~h~~~--~~~~ 275 (350)
T 1juh_A 198 TVWHTGANALASTAGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVPTWSFP--GACA 275 (350)
T ss_dssp SCSSSSCCCCCSSTTCCEEECTTCSCEEEECTTSCEEEEEEECHHHHGGGCEEEEEEEECCCCTTSCCCCBCCS--SCEE
T ss_pred CccccCcccccCCCCCceEECCCccchhhcccCCcEEEEEEEeCCcCceeEEEEEEEeeccccCCCCCCcccCC--CcEE
Confidence 111123555 43 3445443344333221 111112333444578888888883 345555554 7899
Q ss_pred EEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEcC
Q 018395 249 TYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIITT 304 (356)
Q Consensus 249 ~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~~ 304 (356)
+||++|++++++-+. + ..+|++||+++||+|.+|...+......++.+.+.
T Consensus 276 ~~vleG~~~i~i~g~---~--~~~l~~Gd~~~iPag~~h~~~~~~~~~~~l~~~~g 326 (350)
T 1juh_A 276 FQVQEGRVVVQIGDY---A--ATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSSG 326 (350)
T ss_dssp EEEEESCEEEEETTS---C--CEEECTTCEEEECTTCCEEEEESSSSEEEEEEEES
T ss_pred EEEEeeEEEEEECCe---E--EEEeCCCCEEEECCCCCEEEEecCCeEEEEEEecC
Confidence 999999999998752 2 25799999999999999999876555777777653
No 38
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.81 E-value=2e-18 Score=160.16 Aligned_cols=195 Identities=12% Similarity=0.099 Sum_probs=136.1
Q ss_pred cCceEEEEEEecCCCcccCeee--CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYC--DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVL 111 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h--~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l 111 (356)
+..+.+..++|+||+....|+| ..+|++||++|++++.+ ++ +.+.|++||.+++|++.+|.+.|.++++++++
T Consensus 56 ~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~---~~--~~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l 130 (261)
T 1rc6_A 56 GASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKA---EG--KTFALSEGGYLYCPPGSLMTFVNAQAEDSQIF 130 (261)
T ss_dssp TCSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEE---TT--EEEEEETTEEEEECTTCCCEEEECSSSCEEEE
T ss_pred CCcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEE---CC--EEEEECCCCEEEECCCCCEEEEeCCCCCEEEE
Confidence 4567888999999998876654 57899999999999987 33 35899999999999999999999999999999
Q ss_pred EEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCceEEEcCCCCcCCCCCcccCCCceee
Q 018395 112 FLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKGIVKLDANAKLPEPKKEHRDGMAFN 191 (356)
Q Consensus 112 ~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~iv~~~~~~~~~~p~~~~~~~~~~~ 191 (356)
++.... . + +.| . .+...+.+.+.
T Consensus 131 ~v~~~~--~-~-------~~g-------~----------------------~p~~~v~~~~~------------------ 153 (261)
T 1rc6_A 131 LYKRRY--V-P-------VEG-------Y----------------------APWLVSGNASE------------------ 153 (261)
T ss_dssp EEEEEC--C-C-------CTT-------C----------------------CCCCEEEEGGG------------------
T ss_pred EEEecc--c-c-------CCC-------C----------------------CCceEEcCHHH------------------
Confidence 886532 1 1 001 0 01112332221
Q ss_pred ccCCCCCcccCCCc-EEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEE
Q 018395 192 CEEAPLDVDIKNGG-RVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLE 270 (356)
Q Consensus 192 l~~~~~~~~~~~gG-~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~ 270 (356)
.++......++ ..+.+...+ ....+.+..+.+.||+...+|||.. ..|+.||++|++++.+- ++.
T Consensus 154 ---~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~pG~~~~~h~H~~-~~E~~~Vl~G~~~~~i~---~~~--- 219 (261)
T 1rc6_A 154 ---LERIHYEGMDDVILLDFLPKE----LGFDMNMHILSFAPGASHGYIETHV-QEHGAYILSGQGVYNLD---NNW--- 219 (261)
T ss_dssp ---SCCC-------CEEEECSCCS----TTCSEEEEEEEECTTCCBEEEEEES-SCEEEEEEESEEEEESS---SCE---
T ss_pred ---CCcccCCCCcceEEEEecCcc----cCCceEEEEEEECCCCccCcccCCC-ceEEEEEEEeEEEEEEC---CEE---
Confidence 01110001111 223232221 1235778999999999999999987 88999999999998863 222
Q ss_pred EEecCCcEEEEcCCcEEEEe-eCC-CCeEEEEEEcC
Q 018395 271 TTVKAGNLFIVPRFYVVSKI-ADP-DGLAWFSIITT 304 (356)
Q Consensus 271 ~~l~~Gdv~vvP~g~~h~~~-~~~-~~~~~~~~~~~ 304 (356)
..|++||++++|+|.+|... .++ ++++++.+.+-
T Consensus 220 ~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~~~d~ 255 (261)
T 1rc6_A 220 IPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDC 255 (261)
T ss_dssp EEEETTCEEEECSSEEEEEEEC----CEEEEEEEEC
T ss_pred EEeCCCCEEEECCCCcEEeEeCCCCcCEEEEEEecC
Confidence 57999999999999999984 477 88999887643
No 39
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.79 E-value=4.4e-17 Score=158.61 Aligned_cols=231 Identities=16% Similarity=0.136 Sum_probs=145.5
Q ss_pred cCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEe-cCCCcEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYN-KEDTELVVLF 112 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N-~g~e~l~~l~ 112 (356)
..++.+...+|.||....+|.|..+|++||++|+|....+ ++ +...+++||++++|+|..|.+.| .|+++++++|
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t~v--~G--~~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l~ 195 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIV--DG--HKVELGANDFVLTPNGTWHEHGILESGTECIWQD 195 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEE--TT--EEEEECTTCEEEECTTCCEEEEECTTCCCEEEEE
T ss_pred CCeeEEEEEEECCCCCcCCccCCcceEEEEEEeeEEEEEE--CC--EEEEEcCCCEEEECcCCCEEEEcCCCCCCEEEEE
Confidence 4578889999999999999999777999999999976444 33 34899999999999999999999 9999999999
Q ss_pred EeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCceEEEcCCCCcCCCCCcccCCC-ceee
Q 018395 113 LGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKGIVKLDANAKLPEPKKEHRDG-MAFN 191 (356)
Q Consensus 113 i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~iv~~~~~~~~~~p~~~~~~~-~~~~ 191 (356)
+.+..-. .++ + ..++...+.+.-. -.-+.....+.. ..+.+..++.. +... ..+ +.|.
T Consensus 196 v~d~Pl~--------~~l-~-~~f~e~~~~~~~~--~~~~~~~~~~~~---~~~~l~p~~~~-----~~~~-~sP~~~y~ 254 (394)
T 3bu7_A 196 GLDIPLT--------NCL-E-ANFYEVHPNDYQT--TDIPLNDSPLTY---GGPALLPQLDK-----WDKP-YSPLLKYS 254 (394)
T ss_dssp EECHHHH--------HHT-T-CCCEEECTTSSCC--CCCCTTHHHHHH---CSTTEEESSCC-----CCCS-SCSCCEEC
T ss_pred cccchhh--------hhc-C-ccccccCcccccC--ccCCccchhhhh---cCccccccccc-----ccCC-CCCcEEec
Confidence 8763210 011 0 1112222211100 000000001000 01112222110 0000 011 1222
Q ss_pred ccC-----------CCCCcccCCCc-EEEEeCCCCC-CCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEE
Q 018395 192 CEE-----------APLDVDIKNGG-RVVLLNTKNL-PLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRA 258 (356)
Q Consensus 192 l~~-----------~~~~~~~~~gG-~~~~~~~~~~-p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~ 258 (356)
... ..++ ...| .+..+++..= .... .|++....|.||+...+|.|+. .++.||++|++++
T Consensus 255 w~~~~~~L~~~~~~~~~~---~~~~~~l~l~nP~~g~~~~~--tl~~~~~~l~PG~~~~~HrH~~--~~v~~VleG~G~~ 327 (394)
T 3bu7_A 255 WEPTYEALLNYAKASDGS---PYDGLILRYTNPQTGGHPML--TMGASMQMLRPGEHTKAHRHTG--NVIYNVAKGQGYS 327 (394)
T ss_dssp HHHHHHHHHHHHTTCCCB---TTTBEEEEECCTTTSSCSSS--SCEEEEEEECTTCBCCCEEESS--CEEEEEEECCEEE
T ss_pred HHHHHHHHHHhhhccCcC---cCCceEEEEeCCCCCCCCCC--eeeEEEEEECCCCcCCCcccCC--cEEEEEEeCeEEE
Confidence 211 0111 1123 3344444321 1123 3778999999999999999985 4799999999977
Q ss_pred EEEccCCceEEEEEecCCcEEEEcCCcEEEE-eeC-CCCeEEEEEE
Q 018395 259 QIVGPDGKRVLETTVKAGNLFIVPRFYVVSK-IAD-PDGLAWFSII 302 (356)
Q Consensus 259 ~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~-~~~-~~~~~~~~~~ 302 (356)
.+ +|++ ..+++||++++|.|..|.+ |.+ ++++.++++.
T Consensus 328 ~V---~ge~---~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i~ 367 (394)
T 3bu7_A 328 IV---GGKR---FDWSEHDIFCVPAWTWHEHCNTQERDDACLFSFN 367 (394)
T ss_dssp EE---TTEE---EEECTTCEEEECTTCCEEEEECCSSCCEEEEEEE
T ss_pred EE---CCEE---EEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEee
Confidence 66 3433 5799999999999999999 556 6889999986
No 40
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=99.77 E-value=1.5e-18 Score=134.69 Aligned_cols=84 Identities=17% Similarity=0.253 Sum_probs=77.7
Q ss_pred eEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEcCC-CCceecccc-ccccccCCCHHHHHHHcCCCHHHHHHHHhc
Q 018395 267 RVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTP-NPIFTHLAG-SIGTWKSLSPSVLEAAFNVPSDVEKQFRSK 344 (356)
Q Consensus 267 ~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~~~-~p~~~~laG-~~s~l~~~p~~vl~~af~~~~~~~~~l~~~ 344 (356)
+.++.+|++|||++|||||+.++.|++ +++|++|.+++ ++..++||| ++|+|++||.+|+++||+++.+++++|+.+
T Consensus 4 ~~~~~~l~~G~v~vVPq~~~v~~~A~~-~le~v~F~tna~~~~~~~LAG~~~Svl~~l~~evla~aF~~s~ee~~~l~~~ 82 (93)
T 1dgw_Y 4 RRYAATLSEGDIIVIPSSFPVALKAAS-DLNMVGIGVNAENNERNFLAGHKENVIRQIPRQVSDLTFPGSGEEVEELLEN 82 (93)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEESS-SEEEEEEEESCTTCCEEESSSSTTBSTTTSCHHHHHHHSSSCTHHHHHHTTS
T ss_pred chhhceecCCcEEEECCCCceeEEecC-CeEEEEEEecCCCCeeeeccCCcccHHHhCCHHHHHHHcCCCHHHHHHHHhc
Confidence 357889999999999999999999986 69999997777 889999999 999999999999999999999999999999
Q ss_pred CCCeEEe
Q 018395 345 RANEAIF 351 (356)
Q Consensus 345 ~~~~~~~ 351 (356)
+++++++
T Consensus 83 q~e~~~~ 89 (93)
T 1dgw_Y 83 QKESYFV 89 (93)
T ss_dssp CCCCSEE
T ss_pred CCCceec
Confidence 9888765
No 41
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.77 E-value=3.9e-17 Score=152.50 Aligned_cols=193 Identities=11% Similarity=0.133 Sum_probs=138.6
Q ss_pred cCceEEEEEEecCCCcccCeee--CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYC--DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVL 111 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h--~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l 111 (356)
+..+.+..++|+||+....|+| ..+|++||++|++++.+ ++ +.+.|++||.+++|++.+|.+.|.++++++++
T Consensus 59 ~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~---~~--~~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l 133 (274)
T 1sef_A 59 GATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSD---GQ--ETHELEAGGYAYFTPEMKMYLANAQEADTEVF 133 (274)
T ss_dssp TCSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEEC---SS--CEEEEETTEEEEECTTSCCEEEESSSSCEEEE
T ss_pred CCcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEE---CC--EEEEECCCCEEEECCCCCEEEEeCCCCCEEEE
Confidence 4567888999999998776544 57899999999999986 33 34899999999999999999999999999999
Q ss_pred EEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCceEEEcCCCCcCCCCCcccCCCceee
Q 018395 112 FLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKGIVKLDANAKLPEPKKEHRDGMAFN 191 (356)
Q Consensus 112 ~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~iv~~~~~~~~~~p~~~~~~~~~~~ 191 (356)
++.... . | +.| + .++..+++.+.-
T Consensus 134 ~v~~~y--~-~-------~~g--------------------------~---~p~~~v~~~~d~----------------- 157 (274)
T 1sef_A 134 LYKKRY--Q-P-------LAG--------------------------H---QPYKVVGSIHDQ----------------- 157 (274)
T ss_dssp EEEEEC--C-C-------CTT--------------------------C---CCCCEEEEGGGS-----------------
T ss_pred EEEeee--e-e-------CCC--------------------------C---CCcceeCChHHC-----------------
Confidence 876421 1 1 001 0 112233333311
Q ss_pred ccCCCCC-cccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecc-cccccCCeeEEEEEeceEEEEEEccCCceEE
Q 018395 192 CEEAPLD-VDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSP-GFSCDSALQVTYIVRGSGRAQIVGPDGKRVL 269 (356)
Q Consensus 192 l~~~~~~-~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~P-H~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~ 269 (356)
++. .....+...+.+.+.+. ...+.+..+.+.||+.... |||. ..|+.||++|++++.+-+ +
T Consensus 158 ----~~~~~~~~~g~~~~~l~~~~~----~~~~~~~~~~l~pg~~~~~~H~H~--~~E~~yVl~G~~~~~i~~----~-- 221 (274)
T 1sef_A 158 ----QPEEYEGMTDVLLWSLLPKEF----DFDMNMHILSFEPGASHAYIETHV--QEHGAYLISGQGMYNLDN----E-- 221 (274)
T ss_dssp ----CCEEGGGCTTEEEEECSCSST----TCSEEEEEEEECTTCBCSSCBCCS--CCEEEEEEECEEEEEETT----E--
T ss_pred ----CccccCCCCCeEEEEeCCccc----CCCEEEEEEEECCCCccCcceecc--CeEEEEEEeCEEEEEECC----E--
Confidence 100 00112334444433221 1257789999999999988 9995 579999999999998732 2
Q ss_pred EEEecCCcEEEEcCCcEEEE-eeCC-CCeEEEEEEc
Q 018395 270 ETTVKAGNLFIVPRFYVVSK-IADP-DGLAWFSIIT 303 (356)
Q Consensus 270 ~~~l~~Gdv~vvP~g~~h~~-~~~~-~~~~~~~~~~ 303 (356)
...|++||+++||++.+|.. +.++ ++++++.+.+
T Consensus 222 ~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~~~ 257 (274)
T 1sef_A 222 WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYSKD 257 (274)
T ss_dssp EEEEETTCEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCCCCEEEEEEEc
Confidence 35799999999999999998 4477 7899988753
No 42
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.76 E-value=5.8e-17 Score=148.70 Aligned_cols=186 Identities=12% Similarity=0.060 Sum_probs=131.2
Q ss_pred eEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEE-eCCCcEEEEEecCCCcEEEEEEee
Q 018395 37 IGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIA-LPFGVVTWWYNKEDTELVVLFLGD 115 (356)
Q Consensus 37 ~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~-iP~G~~H~~~N~g~e~l~~l~i~~ 115 (356)
..+..+++.||+...+|+|...|++||++|++.+.+ ++ ....|++||.++ +|+|.+|.+.|.++++++++.+..
T Consensus 34 ~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~---~~--~~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i~r 108 (243)
T 3h7j_A 34 TEVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTV---GD--VTRKMTALESAYIAPPHVPHGARNDTDQEVIAIDIKR 108 (243)
T ss_dssp EEEEEEEECTTEEEEEECCSSEEEEEEEESEEEEEE---TT--EEEEEETTTCEEEECTTCCEEEEECSSSCEEEEEEEE
T ss_pred CEEEEEEECCCCccCCEECCCcEEEEEEEeEEEEEE---CC--EEEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEEec
Confidence 467778899999999999999999999999999987 33 348999999996 999999999999999988887643
Q ss_pred CCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCceEEEcCCCCcCCCCCcccCCCceeeccCC
Q 018395 116 TSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKGIVKLDANAKLPEPKKEHRDGMAFNCEEA 195 (356)
Q Consensus 116 ~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~iv~~~~~~~~~~p~~~~~~~~~~~l~~~ 195 (356)
... .++ +. +.. ++... .+...
T Consensus 109 ~~~--~e~-~~-----~p~-------------------------------g~~~~--------------------~L~~~ 129 (243)
T 3h7j_A 109 LKA--DET-YT-----SPE-------------------------------DYFLD--------------------IFKTR 129 (243)
T ss_dssp CCT--TCC-CC-----CCT-------------------------------TSEEC--------------------CEECS
T ss_pred cCc--ccc-CC-----Cch-------------------------------hhhhh--------------------hccCc
Confidence 221 000 00 000 00000 00000
Q ss_pred CCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecC-CCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEec
Q 018395 196 PLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDG-KAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVK 274 (356)
Q Consensus 196 ~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~-g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~ 274 (356)
+ ...... + +....--+.+..+.|.| |+...+|||+. .|+.||++|++++++-+ + ...|+
T Consensus 130 ~-~~~~~~---~--------~~~~~~~~~~~~~~~~p~g~~~~~H~H~~--~e~~~Vl~G~~~~~i~~---~---~~~l~ 189 (243)
T 3h7j_A 130 D-LLPGME---V--------TFFVEDWVEIMLAKIPGNGGEMPFHKHRN--EQIGICIGGGYDMTVEG---C---TVEMK 189 (243)
T ss_dssp C-SBTTBC---E--------EEEEETTEEEEEEEECTTTEEEEEECCSS--EEEEEECSSCEEEEETT---E---EEEEC
T ss_pred c-cccCcc---e--------eeeccceeEEEEEEECCCCCcCCCEeCCC--cEEEEEEECEEEEEECC---E---EEEEC
Confidence 0 000000 0 00011124567788999 99999999985 59999999999987643 2 24699
Q ss_pred CCcEEEEcCCcEEEEee-CCCCeEEEEEEcCCC
Q 018395 275 AGNLFIVPRFYVVSKIA-DPDGLAWFSIITTPN 306 (356)
Q Consensus 275 ~Gdv~vvP~g~~h~~~~-~~~~~~~~~~~~~~~ 306 (356)
+||.+++|+|.+|...| +++++.++.+++..+
T Consensus 190 ~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p~~ 222 (243)
T 3h7j_A 190 FGTAYFCEPREDHGAINRSEKESKSINIFFPPR 222 (243)
T ss_dssp TTCEEEECTTCCEEEEECSSSCEEEEEEEESCS
T ss_pred CCCEEEECCCCcEEeEeCCCCCEEEEEEEcCCh
Confidence 99999999999999955 778899998886544
No 43
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.75 E-value=4.2e-18 Score=166.31 Aligned_cols=150 Identities=19% Similarity=0.245 Sum_probs=126.4
Q ss_pred ceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCce
Q 018395 188 MAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKR 267 (356)
Q Consensus 188 ~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~ 267 (356)
+.|++...++.. ..+|+++.++..+||.++ ++++.++.|.||++.+||||+ +.|+.||++|++++++++.+|+.
T Consensus 48 ~~~~~~~~~~~~--~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~--~~E~~~Vl~G~~~~~~~~~~g~~ 121 (385)
T 1j58_A 48 MKFSFSDTHNRL--EKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK--EAEWAYMIYGSARVTIVDEKGRS 121 (385)
T ss_dssp CEECGGGSCCEE--ETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES--SCEEEEEEEEEEEEEEECTTSCE
T ss_pred eEEEcccCCccc--cCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC--hheEEEEEeeeEEEEEEeCCCcE
Confidence 788888887753 679999999999999988 688999999999999999997 67999999999999999988765
Q ss_pred EEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEcCCCCceeccccccccccCCCHHHHHHHcCCCHHHHHHHHhc
Q 018395 268 VLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSK 344 (356)
Q Consensus 268 ~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~~~~p~~~~laG~~s~l~~~p~~vl~~af~~~~~~~~~l~~~ 344 (356)
+...|++||+++||+|.+|++.+..++++++.+++...+....-....++|+.+|.++|+++|+++.+.++++...
T Consensus 122 -~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~evla~~~~vs~~~~~~l~~~ 197 (385)
T 1j58_A 122 -FIDDVGEGDLWYFPSGLPHSIQALEEGAEFLLVFDDGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEISNLPGK 197 (385)
T ss_dssp -EEEEEETTEEEEECTTCCEEEEEEEEEEEEEEEESCTTCCGGGEEEHHHHHHTSCHHHHHHHHTCCTGGGTTSCSS
T ss_pred -EEEEeCCCCEEEECCCCeEEEEECCCCEEEEEEECCCCccccchhhhhhhhhcccHHHHHHHhCCCHHHHHhcccc
Confidence 3358999999999999999996543568999988777654332111368999999999999999999888887653
No 44
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.73 E-value=4.5e-16 Score=143.87 Aligned_cols=203 Identities=10% Similarity=0.006 Sum_probs=143.9
Q ss_pred CCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCC-CceEEEEEcCCCEEEeCCC
Q 018395 17 NGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPE-KEEKVVAIKKGDGIALPFG 95 (356)
Q Consensus 17 ~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~-~~~~~~~l~~GDv~~iP~G 95 (356)
++++++.+.. |.+ +..+.+..++|+||+...+|.|.++|++||++|++++.+ + + +.+.|++||.+++|++
T Consensus 54 ~~~~~~vL~s---P~~-G~~f~~~lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~l---~~g--~~~~L~~Gds~y~p~~ 124 (266)
T 4e2q_A 54 TNTLGAYLIT---PAT-GSHFVMYLAKMKEMSSSGLPPQDIERLIFVVEGAVTLTN---TSS--SSKKLTVDSYAYLPPN 124 (266)
T ss_dssp SSEEEEEEEC---GGG-TCSSEEEEEEECSSEECCCCCTTEEEEEEEEEECEEEEC-----C--CCEEECTTEEEEECTT
T ss_pred cCEEEEEEcC---CCC-CCcEEEEEEEECcCCcCCCCCCCCeEEEEEEEEEEEEEE---CCC--cEEEEcCCCEEEECCC
Confidence 4555655544 444 467899999999999988887799999999999999986 2 2 2489999999999999
Q ss_pred cEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCceEEE-cCCC
Q 018395 96 VVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKGIVK-LDAN 174 (356)
Q Consensus 96 ~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~iv~-~~~~ 174 (356)
..|++.|. ++++++++...- .| +.| ..++ .++. .+
T Consensus 125 ~~H~~~N~--~~Ar~l~V~k~y---~~-------~~g-----------------------------~~p~-~~v~~~~-- 160 (266)
T 4e2q_A 125 FHHSLDCV--ESATLVVFERRY---EY-------LGS-----------------------------HTTE-LIVGSTD-- 160 (266)
T ss_dssp CCCEEEES--SCEEEEEEEEEC---CC-------CTT-----------------------------CCCC-CEEEEGG--
T ss_pred CCEEEEeC--CCEEEEEEEeEe---ee-------CCC-----------------------------CCCc-eeeCcHh--
Confidence 99999995 578888875421 11 001 0111 2222 11
Q ss_pred CcCCCCCcccCCCceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecc-cccccCCeeEEEEEe
Q 018395 175 AKLPEPKKEHRDGMAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSP-GFSCDSALQVTYIVR 253 (356)
Q Consensus 175 ~~~~~p~~~~~~~~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~P-H~h~~~A~ei~~v~~ 253 (356)
+.++.-....+-..+.+.+.++ .-++.+..+.|+||+.... |.|.. .+.+||++
T Consensus 161 -------------------dv~~~~~~g~~~~~r~l~p~~~----~~d~~~~~~t~~PG~~~p~~e~H~~--eh~~~vL~ 215 (266)
T 4e2q_A 161 -------------------KQPLLETPGEVFELRKLLPMSV----AYDFNIHTMDFQPGEFLNVKEVHYN--QHGLLLLE 215 (266)
T ss_dssp -------------------GSCCBCCTTCCSEEEESSCCST----TCSEEEEEEEECTTCBCSSCCCCSC--CEEEEEEE
T ss_pred -------------------HCCCcccCCCcEEEEEccCccc----ccceEEEEEEECCCcCcCCceEccc--ceEEEEEe
Confidence 1111100011223455555553 3368889999999999985 77865 58999999
Q ss_pred ceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEE-eeCCCCeEEEEEEc
Q 018395 254 GSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSK-IADPDGLAWFSIIT 303 (356)
Q Consensus 254 G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~-~~~~~~~~~~~~~~ 303 (356)
|++.+.+=+ . ...|++||++++|.+.+|++ +.|+++++|+...+
T Consensus 216 G~g~y~l~~----~--~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl~ykd 260 (266)
T 4e2q_A 216 GQGIYRLGD----N--WYPVQAGDVIWMAPFVPQWYAALGKTRSRYLLYKD 260 (266)
T ss_dssp CEEEEEETT----E--EEEEETTCEEEECTTCCEEEEEESSSCEEEEEEEE
T ss_pred ceEEEEECC----E--EEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEcc
Confidence 999877432 2 25799999999999999999 45899999998654
No 45
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.72 E-value=8.7e-16 Score=139.47 Aligned_cols=189 Identities=17% Similarity=0.145 Sum_probs=129.7
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEe
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLG 114 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~ 114 (356)
.+..+..+.+.||+...+|.|..++++||++|++.+.+ ++ ....|++||++++|+|.+|.+.|.+ +++++++.
T Consensus 35 ~~~~~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i---~~--~~~~l~~Gd~~~~p~~~~H~~~a~~--~~~~l~i~ 107 (227)
T 3rns_A 35 PNSYISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFI---EN--NKKTISNGDFLEITANHNYSIEARD--NLKLIEIG 107 (227)
T ss_dssp SSEEEEEEEECTTCEEEECSCSSCEEEEEEESEEEEEE---SS--CEEEEETTEEEEECSSCCEEEEESS--SEEEEEEE
T ss_pred CCcEEEEEEECCCCccCccccCCCEEEEEEeCEEEEEE---CC--EEEEECCCCEEEECCCCCEEEEECC--CcEEEEEE
Confidence 46788999999999999999999999999999999987 23 3489999999999999999999864 58888876
Q ss_pred eCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCceEEEcCCCCcCCCCCcccCCCceeeccC
Q 018395 115 DTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKGIVKLDANAKLPEPKKEHRDGMAFNCEE 194 (356)
Q Consensus 115 ~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~iv~~~~~~~~~~p~~~~~~~~~~~l~~ 194 (356)
..- .. . ++ + ++ .++.+.. +.++. +.+
T Consensus 108 ~~~--~~----~-~~--~-~~-------------------~~~~l~~----~~~~~---------------------~~d 133 (227)
T 3rns_A 108 EKI--GD----G-NM--E-NK-------------------TLKMLES----ASAFN---------------------LAE 133 (227)
T ss_dssp ECC-------------------------------------------------CCEE---------------------SGG
T ss_pred eec--cc----c-hh--h-hh-------------------HhhcCCc----cccCc---------------------HHH
Confidence 531 00 0 00 0 00 0111110 11222 211
Q ss_pred CCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEec
Q 018395 195 APLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVK 274 (356)
Q Consensus 195 ~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~ 274 (356)
.-+ + ..++.....- ...-.+++..+.+.||+...+|+|+ ..|+.||++|++++.+- |+ ...|+
T Consensus 134 ~~~-~--~~g~~~~~~l------~~~~~~~~~~~~~~~G~~~~~H~H~--~~e~~~Vl~G~~~~~i~---g~---~~~l~ 196 (227)
T 3rns_A 134 VVE-Y--QEGKIVSKNL------VAKPNLVMTIMSFWKGESLDPHKAP--GDALVTVLDGEGKYYVD---GK---PFIVK 196 (227)
T ss_dssp GSC-C--CTTCEEEEEE------EEETTEEEEEEEECTTCEEEEECCS--SEEEEEEEEEEEEEEET---TE---EEEEE
T ss_pred ccc-c--CCCCEEEEEE------EECCCeEEEEEEECCCCccCCEECC--CcEEEEEEeEEEEEEEC---CE---EEEEC
Confidence 111 1 1122211110 0111467889999999999999997 46999999999998863 22 35799
Q ss_pred CCcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 275 AGNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 275 ~Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
+||.+++|+|.+|...++.++++++.+
T Consensus 197 ~Gd~i~ip~~~~H~~~~~~~~~~~ll~ 223 (227)
T 3rns_A 197 KGESAVLPANIPHAVEAETENFKMLLI 223 (227)
T ss_dssp TTEEEEECTTSCEEEECCSSCEEEEEE
T ss_pred CCCEEEECCCCcEEEEeCCCCEEEEEE
Confidence 999999999999998764556776654
No 46
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.71 E-value=5.7e-16 Score=149.14 Aligned_cols=238 Identities=17% Similarity=0.183 Sum_probs=143.8
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEe
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLG 114 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~ 114 (356)
..+.+.+..|.||....+|.|..++++||++|+|....+ ++ +...+++||++++|+|..|.+.|+|+++++++++.
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~~v--dG--~~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~v~ 176 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVV--NG--DPVRMSRGDLLLTPGWCFHGHMNDTDQPMAWIDGL 176 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEESSCEEEECSSCEEEEEEE--TT--EEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred CceEEEEEEECCCCccCceecccceEEEEEecceEEEEE--CC--EEEEEeCCCEEEECCCCcEEeEeCCCCCeEEEEec
Confidence 578999999999999999999778999999999963344 33 34899999999999999999999999999999987
Q ss_pred eCCCCCCCCceeEEeecccccc---c-ccCcHHHHHhhc-cCCHHHHHHhhcccCCceEEEcCCCCcCCCCCcccCCCce
Q 018395 115 DTSKGHKAGEFTNFFLTGANGI---F-TGFSTEFVSRAW-DLDENTVKTLVGKQTGKGIVKLDANAKLPEPKKEHRDGMA 189 (356)
Q Consensus 115 ~~~~~~~pg~~~~f~lag~~s~---l-~~~~~~vl~~af-~~~~~~~~~l~~~q~~~~iv~~~~~~~~~~p~~~~~~~~~ 189 (356)
+..-...-+ ..|+-.+...+ - ...+..--.+.| ++-.. .. ......+.|++.. .+..+..+.
T Consensus 177 D~Pl~~~l~--~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~P~--~~-~~~~~~sP~~~yp--------w~~~~~aL~ 243 (368)
T 3nw4_A 177 DIPFSQQMD--VGFFEFGSDRVTDYATPNFSRGERLWCHPGLRPL--SG-LQNTVASPIGAYR--------WEFTDRALT 243 (368)
T ss_dssp CHHHHHHHT--CCCEEECCSSCSCCCCCSSCHHHHHHCSTTCCCG--GG-CSCCSSCSCCEEC--------HHHHHHHHH
T ss_pred chHHHhhcC--ceeeecccccccccccccCCcccchhhccccccc--cc-cCCCCCCCceecC--------HHHHHHHHH
Confidence 632100000 00111110000 0 001111111112 11000 00 0011112222211 000000000
Q ss_pred ee---ccC-CCCCcccCCCcE-EEEeCCC-CCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEcc
Q 018395 190 FN---CEE-APLDVDIKNGGR-VVLLNTK-NLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGP 263 (356)
Q Consensus 190 ~~---l~~-~~~~~~~~~gG~-~~~~~~~-~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~ 263 (356)
. +.. ..++-. .+|-. +..+|+. .=+.+.+ |++....|.||.-..||-|.. .++.+|++|+|++.|-
T Consensus 244 -~~~~l~~~~~~~~~-~~g~~~~~y~NP~tg~~~~pt--i~~~~~~L~pG~~t~~hRht~--s~Vy~V~eG~G~~~I~-- 315 (368)
T 3nw4_A 244 -EQLLLEDEGQPATV-APGHAAIRYVNPTTGGDVMPT--LRCEFHRLRAGTETATRNEVG--STVFQVFEGAGAVVMN-- 315 (368)
T ss_dssp -HHHHHHHTTCSCSS-BTTEEEEECBCTTTSSBSSSS--CEEEEEEECTTCBCCCEEESS--CEEEEEEESCEEEEET--
T ss_pred -hhhhhhhccCCCcc-cCceEEEEEeCCCCCCCcchh--HHhheEEECCCCccCCeeccc--cEEEEEEeCcEEEEEC--
Confidence 0 000 011110 01222 3444432 2244555 668889999999999999985 5899999999999883
Q ss_pred CCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEE
Q 018395 264 DGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSII 302 (356)
Q Consensus 264 ~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~ 302 (356)
| + ..++++||+|+||.+.+|...|. +++.++++.
T Consensus 316 -~-~--~~~w~~gD~fvvP~w~~h~~~n~-~~a~Lf~~~ 349 (368)
T 3nw4_A 316 -G-E--TTKLEKGDMFVVPSWVPWSLQAE-TQFDLFRFS 349 (368)
T ss_dssp -T-E--EEEECTTCEEEECTTCCEEEEES-SSEEEEEEE
T ss_pred -C-E--EEEecCCCEEEECCCCcEEEEeC-CCEEEEEEe
Confidence 3 3 25799999999999999999764 677777776
No 47
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.70 E-value=1.3e-15 Score=142.62 Aligned_cols=198 Identities=13% Similarity=0.158 Sum_probs=135.5
Q ss_pred cCceEEEEEEecCCCcc-cC-eeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEE
Q 018395 34 QGNIGAAKLALEKNGFA-LP-HYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVL 111 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~-~p-H~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l 111 (356)
+..+.+.+++++||+.. .+ |.|..+|++||++|++++.+ ++ +.+.|++||.+++|+|.+|.+.|.++++++++
T Consensus 65 ~~~~~~~~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v~v---~g--~~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l 139 (278)
T 1sq4_A 65 AETFSQYIVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTL---QG--QVHAMQPGGYAFIPPGADYKVRNTTGQHTRFH 139 (278)
T ss_dssp CCSCEEEEEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEE---SS--CEEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CCcEEEEEEEECCCCccCCCCcCCCceEEEEEEeCEEEEEE---CC--EEEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 45788999999999887 34 55788999999999999987 23 34899999999999999999999999999999
Q ss_pred EEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCceEEEcCCCCcCCCCCcccCCCceee
Q 018395 112 FLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKGIVKLDANAKLPEPKKEHRDGMAFN 191 (356)
Q Consensus 112 ~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~iv~~~~~~~~~~p~~~~~~~~~~~ 191 (356)
++..... ..+ | ++ +.+.++-..+. ..+.|-
T Consensus 140 ~v~~~y~-~~~---------g-------~~---------------------~p~~~vgn~~d--i~~~~~---------- 169 (278)
T 1sq4_A 140 WIRKHYQ-KVD---------G-------VP---------------------LPEAFVTNEQD--IQPLVM---------- 169 (278)
T ss_dssp EEEEECC-CCT---------T-------CC---------------------CCCCEEEEGGG--SCCEEC----------
T ss_pred EEEeccc-cCC---------C-------Cc---------------------CCcccccchhh--cCcccC----------
Confidence 8865210 001 1 10 01111111110 000000
Q ss_pred ccCCCCCcccCCCc--EEEEeCCCCCCCccccCceeEEEEecCCCeecc-cccccCCeeEEEEEeceEEEEEEccCCceE
Q 018395 192 CEEAPLDVDIKNGG--RVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSP-GFSCDSALQVTYIVRGSGRAQIVGPDGKRV 268 (356)
Q Consensus 192 l~~~~~~~~~~~gG--~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~P-H~h~~~A~ei~~v~~G~~~~~iv~~~g~~~ 268 (356)
++ ..+. ..+.+.+.+ ...++.+..+.|.||+-... |.|. -.+.+||++|++.+.+ +|+.
T Consensus 170 -----~~---~~~~~~~~r~l~p~~----~~~~~~~~~~~l~pG~~i~~~~~h~--~e~~~~il~G~~~~~~---~~~~- 231 (278)
T 1sq4_A 170 -----PD---TEGRWSTTRFVDMSD----MRHDMHVNIVNFEPGGVIPFAETHV--MEHGLYVLEGKAVYRL---NQDW- 231 (278)
T ss_dssp -----SS---GGGCEEEECSSCTTC----TTCSEEEEEEEECSSSEESCCCCCS--EEEEEEEEECEEEEEE---TTEE-
T ss_pred -----CC---CCCceeEEEEecCCC----cCCCeEEEEEEECCCCCcCCCCCCC--ccEEEEEEeCEEEEEE---CCEE-
Confidence 00 0011 111111111 12357799999999999986 5554 4689999999998775 3322
Q ss_pred EEEEecCCcEEEEcCCcEEEEe-eCCCCeEEEEEEcCCC
Q 018395 269 LETTVKAGNLFIVPRFYVVSKI-ADPDGLAWFSIITTPN 306 (356)
Q Consensus 269 ~~~~l~~Gdv~vvP~g~~h~~~-~~~~~~~~~~~~~~~~ 306 (356)
..|++||+++++.|-+|.+. .|+++++|+.+.+-++
T Consensus 232 --~~v~~GD~~~~~~~~~h~~~n~g~~~~~yl~~~d~nr 268 (278)
T 1sq4_A 232 --VEVEAGDFMWLRAFCPQACYSGGPGRFRYLLYKDVNR 268 (278)
T ss_dssp --EEEETTCEEEEEESCCEEEECCSSSCEEEEEEEECSS
T ss_pred --EEeCCCCEEEECCCCCEEEEcCCCCCEEEEEEEEcCC
Confidence 58999999999999999994 5889999998875444
No 48
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.63 E-value=8.6e-14 Score=127.83 Aligned_cols=194 Identities=11% Similarity=0.038 Sum_probs=132.8
Q ss_pred cCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
+..+.+..++++||+...+|+ .+|++||++|++.+.+ ++ +.+.|++||.+++|++.+|.+.|. ++++++++
T Consensus 47 ~~~~~~~~~~l~Pg~~~~~~~--~ee~~~Vl~G~~~~~~---~~--~~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l~v 117 (246)
T 1sfn_A 47 GARFVQFTAEMPAGAQATESV--YQRFAFVLSGEVDVAV---GG--ETRTLREYDYVYLPAGEKHMLTAK--TDARVSVF 117 (246)
T ss_dssp CCSSEEEEEEECTTCEEECCS--SEEEEEEEEEEEEEEC---SS--CEEEECTTEEEEECTTCCCEEEEE--EEEEEEEE
T ss_pred CCcEEEEEEEECCCCcCCCCc--eeEEEEEEECEEEEEE---CC--EEEEECCCCEEEECCCCCEEEEeC--CCEEEEEE
Confidence 356788899999999888886 8899999999999986 33 348999999999999999999998 66888877
Q ss_pred eeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCceEEEcCCCCcCCCCCcccCCCceeecc
Q 018395 114 GDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKGIVKLDANAKLPEPKKEHRDGMAFNCE 193 (356)
Q Consensus 114 ~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~iv~~~~~~~~~~p~~~~~~~~~~~l~ 193 (356)
...- . | +.| .+ ... .++.-... . .+. .
T Consensus 118 ~~~y--~-~-------~~g-------~~---------------------~p~-~~vg~~~d-v--~~~-------~---- 144 (246)
T 1sfn_A 118 EKPY--Q-T-------VEG-------VQ---------------------APG-VYWGNERE-N--PGY-------P---- 144 (246)
T ss_dssp EECC--C-C-------BTT-------BC---------------------CCC-CEEEETTT-C--CCE-------E----
T ss_pred Eeee--c-c-------CCC-------Cc---------------------CCc-eeeccHhh-C--Ccc-------c----
Confidence 5421 1 1 111 10 011 12210100 0 000 0
Q ss_pred CCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEe
Q 018395 194 EAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTV 273 (356)
Q Consensus 194 ~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l 273 (356)
.....|-..+.+.+.+. ..++.+..+.|.||+-...|.|.. ..|..||++|++.+.+ +|+. ..|
T Consensus 145 -----~~~~~g~~~r~l~p~~~----~~~~~~~~~tl~PG~~~~~~~~h~-~ee~~~vLeG~~~~~~---~~~~---~~l 208 (246)
T 1sfn_A 145 -----FEGDDHLIARKLLPDEP----AFDFMVSTMSFAPGASLPYAEVHY-MEHGLLMLEGEGLYKL---EENY---YPV 208 (246)
T ss_dssp -----TTSCTTEEEEECSCCCT----TCSEEEEEEEECTTCBCSSCBCCS-SCEEEEEEECEEEEEE---TTEE---EEE
T ss_pred -----cCCCCCeEEEEeCCCcc----CCCeEEEEEEECCCCccCcccCCC-ceEEEEEEECEEEEEE---CCEE---EEc
Confidence 00011222333333221 235778999999999888643333 5799999999998886 3322 489
Q ss_pred cCCcEEEEcCCcEEEE-eeCCCCeEEEEEEcCC
Q 018395 274 KAGNLFIVPRFYVVSK-IADPDGLAWFSIITTP 305 (356)
Q Consensus 274 ~~Gdv~vvP~g~~h~~-~~~~~~~~~~~~~~~~ 305 (356)
++||.++++.+.+|.+ |.|+++++++.+.+-+
T Consensus 209 ~~GD~~~~~~~~pH~~~n~g~~~~~yl~~kd~~ 241 (246)
T 1sfn_A 209 TAGDIIWMGAHCPQWYGALGRNWSKYLLYKDMN 241 (246)
T ss_dssp ETTCEEEECTTCCEEEEEESSSCEEEEEEEECS
T ss_pred CCCCEEEECCCCCEEEEcCCCCCEEEEEEEecc
Confidence 9999999999999998 5588999999986543
No 49
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=99.55 E-value=3.6e-14 Score=109.99 Aligned_cols=84 Identities=15% Similarity=0.228 Sum_probs=74.3
Q ss_pred EEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecc-cccccccCcHHHHHhhccCCHHHHHH
Q 018395 80 KVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTG-ANGIFTGFSTEFVSRAWDLDENTVKT 158 (356)
Q Consensus 80 ~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag-~~s~l~~~~~~vl~~af~~~~~~~~~ 158 (356)
...+|++||+++||+|++....+.. +++++|+..+. ++. +.+|||| ..|+|++||.++|+.||+++.+++++
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna--~~~---~~~~LAG~~~Svl~~l~~evla~aF~~s~ee~~~ 78 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNA--ENN---ERNFLAGHKENVIRQIPRQVSDLTFPGSGEEVEE 78 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESC--TTC---CEEESSSSTTBSTTTSCHHHHHHHSSSCTHHHHH
T ss_pred hhceecCCcEEEECCCCceeEEecC--CeEEEEEEecC--CCC---eeeeccCCcccHHHhCCHHHHHHHcCCCHHHHHH
Confidence 3579999999999999999999974 49999976654 232 6899999 89999999999999999999999999
Q ss_pred hhcccCCceEEE
Q 018395 159 LVGKQTGKGIVK 170 (356)
Q Consensus 159 l~~~q~~~~iv~ 170 (356)
|+.+|+++.|+.
T Consensus 79 l~~~q~e~~~~~ 90 (93)
T 1dgw_Y 79 LLENQKESYFVD 90 (93)
T ss_dssp HTTSCCCCSEEC
T ss_pred HHhcCCCceecc
Confidence 999999888875
No 50
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.53 E-value=1.1e-14 Score=110.11 Aligned_cols=71 Identities=20% Similarity=0.298 Sum_probs=64.8
Q ss_pred ccccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCc
Q 018395 8 KLAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKE 78 (356)
Q Consensus 8 ~~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~ 78 (356)
.+.++.+.+..|++..+++.++|.|+..+++++++.|.||++..|||| +|.|++||++|++++++|+++++
T Consensus 7 ~~~~p~~~n~~G~~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g~ 78 (79)
T 1dgw_X 7 RSRDPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQ 78 (79)
T ss_dssp TSSCCSEECSSEEEEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC--
T ss_pred ccCCCCccCCCCcEEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCCCC
Confidence 345677899999999999999999999999999999999999999999 99999999999999999998763
No 51
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.40 E-value=4e-12 Score=109.03 Aligned_cols=143 Identities=13% Similarity=0.101 Sum_probs=97.5
Q ss_pred cCCCccccceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCC----Cce
Q 018395 4 DLTPKLAKQVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPE----KEE 79 (356)
Q Consensus 4 dl~~~~~~~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~----~~~ 79 (356)
|++..++... ...|.....+.... .....++.+..++++||+...+|+|...|++||++|++++.+-..+ +..
T Consensus 11 ~~~~~~~~~~-~~~G~~~~~l~~~~--~~g~~~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~ 87 (163)
T 1lr5_A 11 DISQMPQSSY-GIEGLSHITVAGAL--NHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQP 87 (163)
T ss_dssp EGGGSCCBCT-TCTTEEEEEEECHH--HHCCSSEEEEEEEECTTCBCCEEEESSCEEEEEEECCEEEEECCSSSSSCCSC
T ss_pred ChHHCChhhc-cCCCcceEEEeccc--cCCCCcEEEEEEEECCCCcCCCeECCCCeEEEEEeCEEEEEECCccccccCcc
Confidence 3443444433 33455555443211 1223468889999999999999999889999999999999874311 112
Q ss_pred EEEEEcCCCEEEeCCCcEEEEEecC-CCcEEEEEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHH
Q 018395 80 KVVAIKKGDGIALPFGVVTWWYNKE-DTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKT 158 (356)
Q Consensus 80 ~~~~l~~GDv~~iP~G~~H~~~N~g-~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~ 158 (356)
+.+.|++||++++|+|.+|++.|.+ +++++++++.... +. ..++.. +|+..+....+...+.++.+.+++
T Consensus 88 ~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~----~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 158 (163)
T 1lr5_A 88 QEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRP----PA--KIFLYD---DWSMPHTAAVLKFPFVWDEDCFEA 158 (163)
T ss_dssp EEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEESS----SC--CEEEES---STTSCGGGCEEESSCTTTHHHHHH
T ss_pred EEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEECCC----Cc--cccccc---ccccCCcCccceeccccccccccc
Confidence 4589999999999999999999998 8899999987643 11 233322 455555555555556666666654
No 52
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.32 E-value=8.2e-12 Score=107.46 Aligned_cols=98 Identities=19% Similarity=0.231 Sum_probs=80.2
Q ss_pred ceeeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcc-cCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCE
Q 018395 12 QVYGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFA-LPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDG 89 (356)
Q Consensus 12 ~~~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~-~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv 89 (356)
+......|..+.... +......+.+..++|+||+.. .+|+| ..+|++||++|++++.+ ++ ..+.|++||+
T Consensus 21 p~~~~~~G~~~~~l~---~~~~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~---~~--~~~~l~~GD~ 92 (163)
T 3i7d_A 21 RLNAAMDGRSSLRLG---DAGGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVD---DQ--GEHPMVPGDC 92 (163)
T ss_dssp GGGGGGTTEEEEEHH---HHTTCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEE---TT--EEEEECTTCE
T ss_pred CccccCCCeEEEEcc---cCCCCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEE---CC--EEEEeCCCCE
Confidence 444456777766543 333456789999999999966 79999 55899999999999987 23 3589999999
Q ss_pred EEeCCC--cEEEEEecCCCcEEEEEEeeCC
Q 018395 90 IALPFG--VVTWWYNKEDTELVVLFLGDTS 117 (356)
Q Consensus 90 ~~iP~G--~~H~~~N~g~e~l~~l~i~~~~ 117 (356)
+++|+| ..|++.|.++++++++++....
T Consensus 93 i~ip~~~~~~H~~~n~~~~~~~~l~v~~p~ 122 (163)
T 3i7d_A 93 AAFPAGDPNGHQFVNRTDAPATFLVVGTRT 122 (163)
T ss_dssp EEECTTCCCCBEEECCSSSCEEEEEEEECC
T ss_pred EEECCCCCcceEEEECCCCCEEEEEEECCC
Confidence 999999 9999999999999999988754
No 53
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.32 E-value=1.7e-12 Score=102.34 Aligned_cols=81 Identities=17% Similarity=0.125 Sum_probs=68.5
Q ss_pred ccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEE
Q 018395 33 RQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVL 111 (356)
Q Consensus 33 ~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l 111 (356)
.+..+.+.+++++||+...+|+| ...+++||++|++++.. +++......+++||++++|+|..|.+.|.|+++|+||
T Consensus 13 en~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~--~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~I 90 (98)
T 3lag_A 13 DNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFL 90 (98)
T ss_dssp ESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TTSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEE
T ss_pred cCCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEe--CCCceEEEEecCCcEEEEcCCCcEECEECCCCeEEEE
Confidence 34578999999999999999999 66788889999998863 4444455789999999999999999999999999999
Q ss_pred EEee
Q 018395 112 FLGD 115 (356)
Q Consensus 112 ~i~~ 115 (356)
.+-.
T Consensus 91 eVE~ 94 (98)
T 3lag_A 91 EIEL 94 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8743
No 54
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.32 E-value=1.5e-11 Score=105.34 Aligned_cols=79 Identities=23% Similarity=0.312 Sum_probs=70.5
Q ss_pred cCceEEEEEEecCCC-cccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCC-cEEEEEecCCCcEEE
Q 018395 34 QGNIGAAKLALEKNG-FALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFG-VVTWWYNKEDTELVV 110 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~-~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G-~~H~~~N~g~e~l~~ 110 (356)
..++.+..++++||+ ...+||| ..+|++||++|++.+.+ ++ ..+.|++||++++|+| ..|++.|.+++++++
T Consensus 43 ~~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~---~~--~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~ 117 (162)
T 3l2h_A 43 LRHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTM---EN--DQYPIAPGDFVGFPCHAAAHSISNDGTETLVC 117 (162)
T ss_dssp CCSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEE---TT--EEEEECTTCEEEECTTSCCEEEECCSSSCEEE
T ss_pred CCeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEE---CC--EEEEeCCCCEEEECCCCceEEeEeCCCCCEEE
Confidence 357789999999999 5899999 99999999999999986 33 3589999999999997 999999999999999
Q ss_pred EEEeeCC
Q 018395 111 LFLGDTS 117 (356)
Q Consensus 111 l~i~~~~ 117 (356)
+++..+.
T Consensus 118 l~v~~p~ 124 (162)
T 3l2h_A 118 LVIGQRL 124 (162)
T ss_dssp EEEEECC
T ss_pred EEEECCC
Confidence 9987754
No 55
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.31 E-value=7e-12 Score=98.15 Aligned_cols=78 Identities=17% Similarity=0.107 Sum_probs=67.0
Q ss_pred CceEEEEEEecCCCcccCeeeCCC-EEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSA-RVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~-e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
..+.+.+++++||+...+|.|..+ |++||++|++++.+ ++....+.|++||++++|+|.+|++.|.++++++++.+
T Consensus 16 ~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~---~~g~~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 16 ERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLET---PEGSVTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp SSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEE---TTEEEEEEECTTCCEEECTTCEEEEECCSSSCEEEEEE
T ss_pred CeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEe---CCCCEEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEE
Confidence 468889999999999999999554 69999999999986 22113589999999999999999999999999999887
Q ss_pred ee
Q 018395 114 GD 115 (356)
Q Consensus 114 ~~ 115 (356)
..
T Consensus 93 ~~ 94 (97)
T 2fqp_A 93 EI 94 (97)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 56
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.31 E-value=2.7e-11 Score=104.63 Aligned_cols=79 Identities=13% Similarity=0.154 Sum_probs=71.3
Q ss_pred cCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecC-CCcEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKE-DTELVVLF 112 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g-~e~l~~l~ 112 (356)
...+.+..++++||+...+|+|...|++||++|++.+.+ ++ ..+.|++||+++||+|.+|++.|.+ ++++++++
T Consensus 53 ~~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i---~~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~ 127 (167)
T 3ibm_A 53 APAFETRYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVL---DD--RVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLC 127 (167)
T ss_dssp SSSEEEEEEEECTTCBCCCBBCSSCEEEEEEESEEEEEE---TT--EEEEECTTCEEEECTTCCEEEEEESSSCCEEEEE
T ss_pred CCcEEEEEEEECCCCCCCCccCCCcEEEEEEeCEEEEEE---CC--EEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEE
Confidence 457889999999999999999999999999999999986 33 3589999999999999999999999 99999999
Q ss_pred EeeCC
Q 018395 113 LGDTS 117 (356)
Q Consensus 113 i~~~~ 117 (356)
+....
T Consensus 128 i~~~~ 132 (167)
T 3ibm_A 128 IVDSD 132 (167)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 87753
No 57
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.30 E-value=1e-11 Score=101.39 Aligned_cols=80 Identities=13% Similarity=-0.006 Sum_probs=68.4
Q ss_pred cCceEEEEEEecCCCcccCeeeC-CCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYCD-SARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h~-a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
+.++.+.+++++||+...+|||. ..|++||++|++.+.+. ++ ..+.|++||++++|+|.+|++.|.+++++++++
T Consensus 36 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~--~~--~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~ 111 (125)
T 3h8u_A 36 TNDSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQG--NG--IVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVS 111 (125)
T ss_dssp CSSCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECS--TT--CEEEEETTEEEEECTTCCCEEEECSSSCEEEEE
T ss_pred CCCEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEEC--CC--eEEEeCCCCEEEECCCCEEEeEeCCCCCEEEEE
Confidence 34678899999999999999995 69999999999998641 22 348999999999999999999999999999999
Q ss_pred EeeCC
Q 018395 113 LGDTS 117 (356)
Q Consensus 113 i~~~~ 117 (356)
++.+.
T Consensus 112 v~~p~ 116 (125)
T 3h8u_A 112 VVAPG 116 (125)
T ss_dssp EEEST
T ss_pred EECCC
Confidence 87653
No 58
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.30 E-value=1.3e-11 Score=96.48 Aligned_cols=79 Identities=18% Similarity=0.171 Sum_probs=69.2
Q ss_pred ccCceEEEEEEecCCCcccCeeeC-CCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEE
Q 018395 33 RQGNIGAAKLALEKNGFALPHYCD-SARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVL 111 (356)
Q Consensus 33 ~~~~~~~~~~~l~Pg~~~~pH~h~-a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l 111 (356)
...++.+..+++.||....+|+|. .+|++||++|++.+.+ ++ ..+.+++||++++|+|..|.+.|.++++++++
T Consensus 24 ~~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~---~~--~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~ 98 (105)
T 1v70_A 24 QSERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV---GE--EEALLAPGMAAFAPAGAPHGVRNESASPALLL 98 (105)
T ss_dssp EETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE---TT--EEEEECTTCEEEECTTSCEEEECCSSSCEEEE
T ss_pred CCCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE---CC--EEEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 345788999999999999999994 6799999999999986 23 35899999999999999999999999999999
Q ss_pred EEeeC
Q 018395 112 FLGDT 116 (356)
Q Consensus 112 ~i~~~ 116 (356)
++..+
T Consensus 99 ~v~~p 103 (105)
T 1v70_A 99 VVTAP 103 (105)
T ss_dssp EEEES
T ss_pred EEeCC
Confidence 88654
No 59
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.28 E-value=3.6e-11 Score=99.72 Aligned_cols=78 Identities=24% Similarity=0.146 Sum_probs=68.3
Q ss_pred ccCceEEEEEEecCCCcccCeeeC-CCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEE
Q 018395 33 RQGNIGAAKLALEKNGFALPHYCD-SARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVL 111 (356)
Q Consensus 33 ~~~~~~~~~~~l~Pg~~~~pH~h~-a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l 111 (356)
.+..+.+..++++||+...+|+|. ..|++||++|++.+.+ ++ ..+.|++||++++|+|.+|++.|.++++++++
T Consensus 53 ~~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i---~~--~~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l 127 (133)
T 1o4t_A 53 HNKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHD---NG--KDVPIKAGDVCFTDSGESHSIENTGNTDLEFL 127 (133)
T ss_dssp TTSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEE---TT--EEEEEETTEEEEECTTCEEEEECCSSSCEEEE
T ss_pred CCceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEE---CC--EEEEeCCCcEEEECCCCcEEeEECCCCCEEEE
Confidence 345677889999999999999995 7999999999999986 23 45899999999999999999999999999999
Q ss_pred EEee
Q 018395 112 FLGD 115 (356)
Q Consensus 112 ~i~~ 115 (356)
++..
T Consensus 128 ~v~~ 131 (133)
T 1o4t_A 128 AVII 131 (133)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8754
No 60
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.26 E-value=6.5e-11 Score=104.39 Aligned_cols=94 Identities=7% Similarity=-0.059 Sum_probs=74.3
Q ss_pred CCeEEEEeCCCCCCCcccCceEEEEEEecCCCccc---CeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeC
Q 018395 17 NGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFAL---PHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALP 93 (356)
Q Consensus 17 ~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~---pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP 93 (356)
++|..+.... +......+.+..++++||+... +|+|..+|++||++|++.+.+- .++....+.|++||.+++|
T Consensus 100 ~~~~~~~~l~---~~~~~~~~~~~~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~~-~~~~~~~~~l~~GD~~~~~ 175 (198)
T 2bnm_A 100 VDYYVYNCLV---RTKRAPSLVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWG-DKENPKEALLPTGASMFVE 175 (198)
T ss_dssp STTEEEEECC---CCTTSTTCEEEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEES-CTTSCEEEEECTTCEEEEC
T ss_pred CCceEEEeec---cCCCCCcceEEEEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEEC-CcCCcccEEECCCCEEEeC
Confidence 4454444443 2334567889999999999887 6888779999999999999872 1111245899999999999
Q ss_pred CCcEEEEEec-CCCcEEEEEEe
Q 018395 94 FGVVTWWYNK-EDTELVVLFLG 114 (356)
Q Consensus 94 ~G~~H~~~N~-g~e~l~~l~i~ 114 (356)
++.+|++.|. ++++++++++.
T Consensus 176 ~~~~H~~~n~~~~~~~~~l~v~ 197 (198)
T 2bnm_A 176 EHVPHAFTAAKGTGSAKLIAVN 197 (198)
T ss_dssp TTCCEEEEESTTSCCEEEEEEE
T ss_pred CCCceEEEecCCCCCeEEEEEe
Confidence 9999999999 99999998874
No 61
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.26 E-value=4.4e-11 Score=95.10 Aligned_cols=80 Identities=19% Similarity=0.181 Sum_probs=70.3
Q ss_pred ccCceEEEEEEecCCCcccCe--eeC-CCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEE
Q 018395 33 RQGNIGAAKLALEKNGFALPH--YCD-SARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELV 109 (356)
Q Consensus 33 ~~~~~~~~~~~l~Pg~~~~pH--~h~-a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~ 109 (356)
...++.+..+++.||....+| +|. ..|++||++|++++.+ ++ ..+.|++||++++|+|..|++.|.++++++
T Consensus 17 ~~~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~---~~--~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~ 91 (113)
T 2gu9_A 17 SLRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV---DG--HTQALQAGSLIAIERGQAHEIRNTGDTPLK 91 (113)
T ss_dssp EETTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE---TT--EEEEECTTEEEEECTTCCEEEECCSSSCEE
T ss_pred cCCcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE---CC--EEEEeCCCCEEEECCCCcEEeEcCCCCCEE
Confidence 346788999999999999888 995 8999999999999987 23 348999999999999999999999999999
Q ss_pred EEEEeeCC
Q 018395 110 VLFLGDTS 117 (356)
Q Consensus 110 ~l~i~~~~ 117 (356)
++++..+.
T Consensus 92 ~~~v~~~~ 99 (113)
T 2gu9_A 92 TVNFYHPP 99 (113)
T ss_dssp EEEEEESC
T ss_pred EEEEECCC
Confidence 99887654
No 62
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.25 E-value=9.9e-12 Score=113.42 Aligned_cols=82 Identities=12% Similarity=0.008 Sum_probs=68.1
Q ss_pred ccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEE-------cCC--------CceEEEEEcCCCEEEeCCCc
Q 018395 33 RQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIV-------LPE--------KEEKVVAIKKGDGIALPFGV 96 (356)
Q Consensus 33 ~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv-------~~~--------~~~~~~~l~~GDv~~iP~G~ 96 (356)
.+..+++..++++||+...+|+| ..+|++||++|++.+.+- ... ++...+.+++||++++|+|.
T Consensus 39 ~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~ 118 (239)
T 2xlg_A 39 KDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHY 118 (239)
T ss_dssp TTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTE
T ss_pred CCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCC
Confidence 34578889999999999999999 699999999999999761 111 11225899999999999999
Q ss_pred EEEEEecCCCcEEE-EEEe
Q 018395 97 VTWWYNKEDTELVV-LFLG 114 (356)
Q Consensus 97 ~H~~~N~g~e~l~~-l~i~ 114 (356)
+|.+.|.+++++++ ++++
T Consensus 119 ~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 119 MHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EEEEECCSSSCEEEEEEEE
T ss_pred CEEEEeCCCCCEEEEEEEE
Confidence 99999999999888 6655
No 63
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.25 E-value=9.2e-11 Score=103.41 Aligned_cols=83 Identities=20% Similarity=0.240 Sum_probs=72.1
Q ss_pred CceEEEEEEecCCCc------ccCeeeC---CCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCC
Q 018395 35 GNIGAAKLALEKNGF------ALPHYCD---SARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKED 105 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~------~~pH~h~---a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~ 105 (356)
.++.+..++++||+. ..+|+|. .+|++||++|++.+.+-+..++...+.|++||++++|+|..|++.|.++
T Consensus 65 ~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~ 144 (190)
T 1x82_A 65 GDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGD 144 (190)
T ss_dssp TCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSS
T ss_pred CCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCc
Confidence 468889999999998 7799994 4799999999999998655445556899999999999999999999999
Q ss_pred CcEEEEEEeeCC
Q 018395 106 TELVVLFLGDTS 117 (356)
Q Consensus 106 e~l~~l~i~~~~ 117 (356)
++++++++....
T Consensus 145 ~~~~~l~v~~~~ 156 (190)
T 1x82_A 145 EPFIFLAIYPAD 156 (190)
T ss_dssp SCEEEEEEEETT
T ss_pred ccEEEEEEECCC
Confidence 999999987643
No 64
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.25 E-value=3.1e-11 Score=103.18 Aligned_cols=78 Identities=10% Similarity=0.144 Sum_probs=70.6
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEe
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLG 114 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~ 114 (356)
..+.+..++++||+...+|+|...|++||++|++.+.+ ++ +.+.|++||+++||+|..|.+.|.++++++++++.
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v---~g--~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~ 116 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHAHVHAVMIHRGHGQCLV---GE--TISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVV 116 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSSCEEEEEEEEEEEEEE---TT--EEEEEETTCEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred CcEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEE---CC--EEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 57888999999999999999988999999999999986 33 35899999999999999999999999999999988
Q ss_pred eCC
Q 018395 115 DTS 117 (356)
Q Consensus 115 ~~~ 117 (356)
...
T Consensus 117 ~~~ 119 (156)
T 3kgz_A 117 NAA 119 (156)
T ss_dssp ESS
T ss_pred eCC
Confidence 753
No 65
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.24 E-value=4.8e-11 Score=100.71 Aligned_cols=83 Identities=10% Similarity=0.043 Sum_probs=69.2
Q ss_pred CceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCc-eEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 35 GNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKE-EKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~-~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
.++.+..+++.||....+|+| ..+|++||++|++++.+-+.... ...+.|++||++++|+|.+|++.|.+++++++++
T Consensus 41 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~ 120 (148)
T 2oa2_A 41 DHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYS 120 (148)
T ss_dssp SSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred CceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEE
Confidence 467888999999999999999 57799999999999987421100 1137999999999999999999999999999998
Q ss_pred EeeCC
Q 018395 113 LGDTS 117 (356)
Q Consensus 113 i~~~~ 117 (356)
+..+.
T Consensus 121 i~~~~ 125 (148)
T 2oa2_A 121 IYAPP 125 (148)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 87643
No 66
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.24 E-value=3.6e-11 Score=103.79 Aligned_cols=78 Identities=17% Similarity=0.121 Sum_probs=70.4
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEe
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLG 114 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~ 114 (356)
.++.+..++++||+...+|+|...|++||++|++.+.+ ++ +.+.|++||++++|+|..|.+.|.++++++++++.
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v---~g--~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~ 125 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQHAHGVMILKGRGHAMV---GR--AVSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMV 125 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSSCEEEEEEEECEEEEE---TT--EEEEECTTCEEEECTTCCEEEECCTTSCEEEEEEE
T ss_pred CeEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEE---CC--EEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 56888999999999999999988899999999999976 33 35899999999999999999999999999999988
Q ss_pred eCC
Q 018395 115 DTS 117 (356)
Q Consensus 115 ~~~ 117 (356)
...
T Consensus 126 ~~~ 128 (166)
T 3jzv_A 126 NAE 128 (166)
T ss_dssp ESS
T ss_pred ccC
Confidence 753
No 67
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.23 E-value=5.1e-11 Score=96.08 Aligned_cols=77 Identities=17% Similarity=0.242 Sum_probs=67.5
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEE-EEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVV-AIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~-~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
.++.+..+++.||....+|+|+..|++||++|++++.+ +++ .+ .|++||++++|+|..|++.|.++++++++++
T Consensus 25 ~~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i---~~~--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i 99 (117)
T 2b8m_A 25 EHVQINHIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTL---EDQ--EPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVV 99 (117)
T ss_dssp SSCEEEEEEEETTCBCCCEECSSCEEEEEEESEEEEEE---TTS--CCEEEETTCEEEECTTCEEEEECCSSSEEEEEEE
T ss_pred CceEEEEEEECCCCcCCCEeCCCcEEEEEEeCEEEEEE---CCE--EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 45678889999999999999999999999999999986 232 26 9999999999999999999999999999987
Q ss_pred eeC
Q 018395 114 GDT 116 (356)
Q Consensus 114 ~~~ 116 (356)
..+
T Consensus 100 ~~~ 102 (117)
T 2b8m_A 100 KAP 102 (117)
T ss_dssp ECS
T ss_pred ECC
Confidence 543
No 68
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.23 E-value=3.7e-11 Score=97.05 Aligned_cols=76 Identities=16% Similarity=0.192 Sum_probs=65.3
Q ss_pred ccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 33 RQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 33 ~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
...++.+.+++++||....+|+|..+|++||++|++++.+ ++ +.+.|++||++++|+|.+|.+.|.++..+.++.
T Consensus 32 ~~~~~~v~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i---~~--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~ 106 (114)
T 3fjs_A 32 KEHRLEVMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGV---DG--AQRRLHQGDLLYLGAGAAHDVNAITNTSLLVTV 106 (114)
T ss_dssp EETTEEEEEEEECTTCEEEEECCSSCEEEEEEESCEEEEE---TT--EEEEECTTEEEEECTTCCEEEEESSSEEEEEEE
T ss_pred eCCCEEEEEEEECCCCccCceeCCCcEEEEEEECEEEEEE---CC--EEEEECCCCEEEECCCCcEEEEeCCCcEEEEEE
Confidence 4467899999999999999999988899999999999987 33 358999999999999999999998776555544
Q ss_pred E
Q 018395 113 L 113 (356)
Q Consensus 113 i 113 (356)
+
T Consensus 107 v 107 (114)
T 3fjs_A 107 V 107 (114)
T ss_dssp E
T ss_pred E
Confidence 3
No 69
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.23 E-value=9.6e-11 Score=98.92 Aligned_cols=98 Identities=20% Similarity=0.219 Sum_probs=78.3
Q ss_pred cCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
..++.+..++++||+...+|+|...|++||++|++++.+ +++. .+.|++||++++|+|.+|++.|.+++++.++++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~---~~~~-~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v 120 (147)
T 2f4p_A 45 VFNTQVYDVVFEPGARTHWHSHPGGQILIVTRGKGFYQE---RGKP-ARILKKGDVVEIPPNVVHWHGAAPDEELVHIGI 120 (147)
T ss_dssp SSSCEEEEEEECTTCEECSEECTTCEEEEEEEEEEEEEE---TTSC-CEEEETTCEEEECTTCCEEEEEBTTBCEEEEEE
T ss_pred CCcEEEEEEEECCCCccCceECCCceEEEEEeCEEEEEE---CCEE-EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 357889999999999999999977999999999999986 2321 279999999999999999999999999999988
Q ss_pred eeCCCCCCCCceeEEeecccccccccCcHHHHHh
Q 018395 114 GDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSR 147 (356)
Q Consensus 114 ~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~ 147 (356)
.... . +. ...||..+.++...+
T Consensus 121 ~~~~--~--~~--------~~~wl~~v~~e~~~~ 142 (147)
T 2f4p_A 121 STQV--H--LG--------PAEWLGSVTEEEYRK 142 (147)
T ss_dssp ECCG--G--GC--------CCEECCCCCHHHHHH
T ss_pred EccC--C--CC--------CceecccCCHHHhhh
Confidence 7643 1 11 135677666655543
No 70
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.22 E-value=5e-11 Score=99.42 Aligned_cols=82 Identities=17% Similarity=0.231 Sum_probs=70.4
Q ss_pred ccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 33 RQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 33 ~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
....+.+..++++||+...+|+|...|++||++|++.+.+.. ++ ..+.+++||++++|+|..|.+.|.+++++++++
T Consensus 35 ~~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~-~~--~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~ 111 (145)
T 3ht1_A 35 GADRFVLTEFEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPD-QG--RTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLV 111 (145)
T ss_dssp TCCSEEEEEEEEEEEEECCCEECSSCEEEEEEEECEEEEEGG-GT--EEEEECTTCEEEECTTCCBEEECCTTCCEEEEE
T ss_pred CCCcEEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEEeE-CC--EEEEECCCCEEEECCCCeEEeEcCCCCCEEEEE
Confidence 345788999999999999999998889999999999987211 23 458999999999999999999999999999998
Q ss_pred EeeCC
Q 018395 113 LGDTS 117 (356)
Q Consensus 113 i~~~~ 117 (356)
+....
T Consensus 112 i~~~~ 116 (145)
T 3ht1_A 112 VAPCE 116 (145)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 87643
No 71
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.20 E-value=5e-11 Score=97.80 Aligned_cols=78 Identities=19% Similarity=0.140 Sum_probs=69.5
Q ss_pred cCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
..++.+..++++||....+|+|...|++||++|++++.+ ++ ..+.+++||++++|+|.+|.+.|.++++++++++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i---~~--~~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v 119 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLK---EQ--GEETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCL 119 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCSSCEEEEEEESEEEEEC---SS--CEEEEETTEEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCCCcEEEEEEEeEEEEEE---CC--EEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 457889999999999999999999999999999999976 22 3489999999999999999999999989999988
Q ss_pred eeC
Q 018395 114 GDT 116 (356)
Q Consensus 114 ~~~ 116 (356)
..+
T Consensus 120 ~~~ 122 (126)
T 1vj2_A 120 IPK 122 (126)
T ss_dssp EEG
T ss_pred Ecc
Confidence 764
No 72
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.19 E-value=7.2e-11 Score=96.30 Aligned_cols=77 Identities=19% Similarity=0.143 Sum_probs=67.9
Q ss_pred cCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
+.++.+.+++++||+...+|+|...|++||++|++.+.+ ++ ..+.|++||++++|+|..|.+.|.++ +++++.+
T Consensus 38 ~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~---~~--~~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v 111 (126)
T 4e2g_A 38 GKNLMLNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTI---GE--ETRVLRPGMAYTIPGGVRHRARTFED-GCLVLDI 111 (126)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSEEEEEEEEECEEEEE---TT--EEEEECTTEEEEECTTCCEEEECCTT-CEEEEEE
T ss_pred CCCeEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEE---CC--EEEEeCCCCEEEECCCCcEEeEECCC-CEEEEEE
Confidence 346889999999999999999977999999999999987 33 34899999999999999999999987 6888887
Q ss_pred eeC
Q 018395 114 GDT 116 (356)
Q Consensus 114 ~~~ 116 (356)
+.+
T Consensus 112 ~~p 114 (126)
T 4e2g_A 112 FSP 114 (126)
T ss_dssp EES
T ss_pred ECC
Confidence 764
No 73
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.17 E-value=6.6e-11 Score=93.20 Aligned_cols=81 Identities=17% Similarity=0.129 Sum_probs=64.5
Q ss_pred ccCceEEEEEEecCCCcccCeeeCC-CEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEE
Q 018395 33 RQGNIGAAKLALEKNGFALPHYCDS-ARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVL 111 (356)
Q Consensus 33 ~~~~~~~~~~~l~Pg~~~~pH~h~a-~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l 111 (356)
.+..+.+.+++|+||+....|.|.. .+++|+++|++++. ..++......+++||++++|+|..|++.|.|+++++|+
T Consensus 13 ~~~~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~--~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi 90 (98)
T 2ozi_A 13 DNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIV--APDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFL 90 (98)
T ss_dssp ESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEE--CTTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEE
T ss_pred eCCcEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEE--eCCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEE
Confidence 3457899999999999999999944 34555667777664 44443234789999999999999999999999999999
Q ss_pred EEee
Q 018395 112 FLGD 115 (356)
Q Consensus 112 ~i~~ 115 (356)
++-.
T Consensus 91 ~vE~ 94 (98)
T 2ozi_A 91 EIEL 94 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9854
No 74
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.17 E-value=4.8e-10 Score=91.63 Aligned_cols=77 Identities=17% Similarity=0.217 Sum_probs=68.8
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEe
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLG 114 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~ 114 (356)
..+.+...+++||....+|||+..|++||++|++++.+ ++ +.+.+++||++++|+|..|.+.|.++++++++++.
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i---~~--~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~ 106 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHNEYELFIVIQGNAIIRI---ND--EDFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIW 106 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCSSEEEEEEEESEEEEEE---TT--EEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred CCcEEEEEEECCCCccCCEecCCeEEEEEEeCEEEEEE---CC--EEEEECCCcEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 45788899999999999999999999999999999987 33 35899999999999999999999998889888876
Q ss_pred eC
Q 018395 115 DT 116 (356)
Q Consensus 115 ~~ 116 (356)
.+
T Consensus 107 f~ 108 (128)
T 4i4a_A 107 WD 108 (128)
T ss_dssp EC
T ss_pred EC
Confidence 53
No 75
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.16 E-value=7.4e-11 Score=102.18 Aligned_cols=78 Identities=17% Similarity=0.171 Sum_probs=69.2
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEe
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLG 114 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~ 114 (356)
.+..+.+++|+||+...+|.|..+|++||++|++++.+- ++ +.+.|++||++ +|+|.+|.+.|.++++++++++.
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~ld--~g--e~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~ 151 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTNSIDYGIVLEGEIELELD--DG--AKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFIL 151 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCSEEEEEEEEESCEEEECG--GG--CEEEECTTCEE-EECSCCBEEECCSSSCEEEEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecCceEEEEEEeCEEEEEEC--CC--eEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEE
Confidence 578899999999999999999888999999999999761 12 34899999999 99999999999999999999988
Q ss_pred eCC
Q 018395 115 DTS 117 (356)
Q Consensus 115 ~~~ 117 (356)
...
T Consensus 152 ~P~ 154 (172)
T 3es1_A 152 IEA 154 (172)
T ss_dssp EEC
T ss_pred cCC
Confidence 754
No 76
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.14 E-value=1.8e-10 Score=98.99 Aligned_cols=74 Identities=18% Similarity=0.099 Sum_probs=65.5
Q ss_pred ceEEEEEEecC-CCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 36 NIGAAKLALEK-NGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 36 ~~~~~~~~l~P-g~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
-+....++|+| |+...+|.+ .++|++||++|++.+.+ ++ ..+.|++||.+++|+|..|.+.|.++++++++++
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl---~g--~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTV---CK--NKFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEE---TT--EEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEE---CC--EEEEEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 57778999999 887777765 99999999999999987 33 4589999999999999999999999999999887
Q ss_pred e
Q 018395 114 G 114 (356)
Q Consensus 114 ~ 114 (356)
.
T Consensus 162 q 162 (166)
T 2vpv_A 162 Q 162 (166)
T ss_dssp E
T ss_pred E
Confidence 4
No 77
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.13 E-value=2e-10 Score=100.87 Aligned_cols=79 Identities=10% Similarity=0.074 Sum_probs=67.7
Q ss_pred ccCceEEEEEEecCCCccc--CeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEE
Q 018395 33 RQGNIGAAKLALEKNGFAL--PHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVV 110 (356)
Q Consensus 33 ~~~~~~~~~~~l~Pg~~~~--pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~ 110 (356)
....+.+..++++||+... +|+|..+|++||++|++.+.+ ++ ..+.|++||++++|+|.+|++.|.+++++ +
T Consensus 100 ~~~~~~~~~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~---~~--~~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~ 173 (192)
T 1y9q_A 100 ADTGLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFF---DE--QWHELQQGEHIRFFSDQPHGYAAVTEKAV-F 173 (192)
T ss_dssp TTTTEEEEEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEE---TT--EEEEECTTCEEEEECSSSEEEEESSSCEE-E
T ss_pred CCCcEEEEEEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEE---CC--EEEEeCCCCEEEEcCCCCeEeECCCCCcE-E
Confidence 4567888999999999876 566677999999999999986 33 45899999999999999999999999999 8
Q ss_pred EEEeeCC
Q 018395 111 LFLGDTS 117 (356)
Q Consensus 111 l~i~~~~ 117 (356)
+++..+.
T Consensus 174 l~v~~~~ 180 (192)
T 1y9q_A 174 QNIVAYP 180 (192)
T ss_dssp EEEEECC
T ss_pred EEEEecC
Confidence 8877653
No 78
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.12 E-value=2.4e-10 Score=93.31 Aligned_cols=82 Identities=13% Similarity=0.104 Sum_probs=68.1
Q ss_pred CcccCceEEEEEEecCCCccc-CeeeCCCE-EEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcE
Q 018395 31 MLRQGNIGAAKLALEKNGFAL-PHYCDSAR-VAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTEL 108 (356)
Q Consensus 31 ~l~~~~~~~~~~~l~Pg~~~~-pH~h~a~e-~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l 108 (356)
.+...++.+..+++.||.... +|+|+..| ++||++|++.+.+ ++ +.+.|++||++++|+|.+|.+.|.+++++
T Consensus 20 ~~~~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i---~~--~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~ 94 (125)
T 3cew_A 20 SLALTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITI---DG--EKIELQAGDWLRIAPDGKRQISAASDSPI 94 (125)
T ss_dssp HHTCSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEE---TT--EEEEEETTEEEEECTTCCEEEEEBTTBCE
T ss_pred ccCCCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEE---CC--EEEEeCCCCEEEECCCCcEEEEcCCCCCE
Confidence 344567888999999999887 89996555 5559999999987 23 35899999999999999999999988889
Q ss_pred EEEEEeeCC
Q 018395 109 VVLFLGDTS 117 (356)
Q Consensus 109 ~~l~i~~~~ 117 (356)
+++++..+.
T Consensus 95 ~~~~i~~~~ 103 (125)
T 3cew_A 95 GFLCIQVKA 103 (125)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEcCC
Confidence 988876643
No 79
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.11 E-value=4.6e-10 Score=92.65 Aligned_cols=73 Identities=22% Similarity=0.145 Sum_probs=55.5
Q ss_pred EEEEEecCCCcccCeeeC-CCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeC
Q 018395 39 AAKLALEKNGFALPHYCD-SARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDT 116 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~-a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~ 116 (356)
+.++.+.||+...+|+|. ..|++||++|++.+.+ ++. ..+.|++||++++|+|.+|++.|.+++ +++++++.+
T Consensus 45 ~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~---~~~-~~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~~~p 118 (134)
T 2o8q_A 45 VIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEY---EDI-GAVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEIVSP 118 (134)
T ss_dssp EEEECC-----CCCEEECCSCEEEEEEESEEEEEE---TTT-EEEEEETTCEEECCTTCCEEEEEECTT-CEEEEEESS
T ss_pred EEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEE---CCc-EEEEecCCCEEEECCCCcEEeEeCCCC-eEEEEEECC
Confidence 455556689999999995 4999999999999986 221 358999999999999999999998774 688877653
No 80
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.11 E-value=3.9e-10 Score=104.11 Aligned_cols=78 Identities=18% Similarity=0.181 Sum_probs=66.8
Q ss_pred cCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCC-CcEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKED-TELVVL 111 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~-e~l~~l 111 (356)
...+.+..++++||+....|+| ..+|++||++|++.+.+ ++ +.+.|++||++++|+|.+|++.|.++ ++++++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i---~~--~~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l 250 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNL---DN--NWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYI 250 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEES---SS--CEEEEETTCEEEECSSEEEEEEEC----CEEEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEE---CC--EEEEeCCCCEEEECCCCcEEeEeCCCCcCEEEE
Confidence 4568889999999999999999 78999999999999976 23 34899999999999999999999999 999999
Q ss_pred EEeeC
Q 018395 112 FLGDT 116 (356)
Q Consensus 112 ~i~~~ 116 (356)
++.+.
T Consensus 251 ~~~d~ 255 (261)
T 1rc6_A 251 YSKDC 255 (261)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 87764
No 81
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.10 E-value=5.6e-10 Score=89.37 Aligned_cols=76 Identities=18% Similarity=0.311 Sum_probs=65.0
Q ss_pred cCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
+.++.+..+++.||....+|+|...|++||++|++.+.+ ++ ..+.+++||++++|+|.+|++.|.+ +++++++
T Consensus 37 ~~~~~~~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~---~~--~~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~~~v 109 (115)
T 1yhf_A 37 RQDLGITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITI---DQ--ETYRVAEGQTIVMPAGIPHALYAVE--AFQMLLV 109 (115)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSEEEEEEEESEEEEEE---TT--EEEEEETTCEEEECTTSCEEEEESS--CEEEEEE
T ss_pred CCceEEEEEEECCCCccCCEECCCcEEEEEEeCEEEEEE---CC--EEEEECCCCEEEECCCCCEEEEECC--CceEEEE
Confidence 346788999999999999999988999999999999986 33 3489999999999999999999987 4667766
Q ss_pred eeC
Q 018395 114 GDT 116 (356)
Q Consensus 114 ~~~ 116 (356)
...
T Consensus 110 ~~~ 112 (115)
T 1yhf_A 110 VVK 112 (115)
T ss_dssp EEC
T ss_pred EEc
Confidence 553
No 82
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.10 E-value=8.1e-10 Score=102.74 Aligned_cols=76 Identities=18% Similarity=0.214 Sum_probs=68.5
Q ss_pred CceEEEEEEecCCCcccC-eeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCC-CcEEEEE
Q 018395 35 GNIGAAKLALEKNGFALP-HYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKED-TELVVLF 112 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~p-H~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~-e~l~~l~ 112 (356)
..+.+..++++||+.... |+|..+|++||++|++.+.+ ++ +.+.|++||+++||++.+|++.|.++ +++++++
T Consensus 180 ~~~~~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i---~~--~~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~ 254 (274)
T 1sef_A 180 FDMNMHILSFEPGASHAYIETHVQEHGAYLISGQGMYNL---DN--EWYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVY 254 (274)
T ss_dssp CSEEEEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEE---TT--EEEEEETTCEEEECTTCCEEEEEECSSSCEEEEE
T ss_pred CCEEEEEEEECCCCccCcceeccCeEEEEEEeCEEEEEE---CC--EEEEECCCCEEEECCCCCEEEEeCCCCCCEEEEE
Confidence 578899999999999988 99988999999999999987 33 44899999999999999999999998 8999998
Q ss_pred Eee
Q 018395 113 LGD 115 (356)
Q Consensus 113 i~~ 115 (356)
+.+
T Consensus 255 ~~~ 257 (274)
T 1sef_A 255 SKD 257 (274)
T ss_dssp EEE
T ss_pred EEc
Confidence 755
No 83
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.10 E-value=4.2e-10 Score=90.28 Aligned_cols=74 Identities=16% Similarity=0.161 Sum_probs=64.9
Q ss_pred ceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEee
Q 018395 36 NIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGD 115 (356)
Q Consensus 36 ~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~ 115 (356)
++.+..+++.||+...+|+|...|++||++|++.+.+ ++ ..+.|++||++++|+|.+|.+.|.+ +++++.++.
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~---~~--~~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v~~ 105 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNV---DG--VIKVLTAGDSFFVPPHVDHGAVCPT--GGILIDTFS 105 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCSSEEEEEEEEECEEEEE---TT--EEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECCcceEEEEEeeEEEEEE---CC--EEEEeCCCCEEEECcCCceeeEeCC--CcEEEEEEC
Confidence 5788999999999999999999999999999999986 33 3489999999999999999999987 467777765
Q ss_pred C
Q 018395 116 T 116 (356)
Q Consensus 116 ~ 116 (356)
+
T Consensus 106 p 106 (116)
T 2pfw_A 106 P 106 (116)
T ss_dssp S
T ss_pred C
Confidence 4
No 84
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.09 E-value=5.7e-10 Score=90.87 Aligned_cols=82 Identities=15% Similarity=0.146 Sum_probs=67.7
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCCCeEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPDGLAWFS 300 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~~~~ 300 (356)
++.+.++.+.||+...+|||+. ..|+.||++|++++.+-+ |+ ...|++||++++|+|.+|...+ +++++.++.
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~-~~e~~~Vl~G~~~~~~~~--~~---~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~ 111 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPH-GQDTWTVISGEAEYHQGN--GI---VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVS 111 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTT-CEEEEEEEECEEEEECST--TC---EEEEETTEEEEECTTCCCEEEECSSSCEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCC-CeEEEEEEEeEEEEEECC--Ce---EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEE
Confidence 4789999999999999999997 799999999999886522 22 2579999999999999999855 778899999
Q ss_pred EEcCCCCce
Q 018395 301 IITTPNPIF 309 (356)
Q Consensus 301 ~~~~~~p~~ 309 (356)
+....++.+
T Consensus 112 v~~p~~~~~ 120 (125)
T 3h8u_A 112 VVAPGNAGF 120 (125)
T ss_dssp EEESTTCCC
T ss_pred EECCCcccc
Confidence 887665443
No 85
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.07 E-value=5.1e-10 Score=91.22 Aligned_cols=75 Identities=15% Similarity=0.104 Sum_probs=62.6
Q ss_pred cCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
...+++..++++||+.. ||| ..+|++||++|++++.+ ++ ..+.|++||+++||+|..|++.|.+ +++++++
T Consensus 37 ~~~~~~~~~~~~pG~~~--~~H~~~~E~~~Vl~G~~~~~~---~g--~~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~ 108 (119)
T 3lwc_A 37 GGPITIGYGRYAPGQSL--TETMAVDDVMIVLEGRLSVST---DG--ETVTAGPGEIVYMPKGETVTIRSHE-EGALTAY 108 (119)
T ss_dssp -CCCEEEEEEECTTCEE--EEECSSEEEEEEEEEEEEEEE---TT--EEEEECTTCEEEECTTCEEEEEEEE-EEEEEEE
T ss_pred CCCEEEEEEEECCCCCc--CccCCCCEEEEEEeCEEEEEE---CC--EEEEECCCCEEEECCCCEEEEEcCC-CCeEEEE
Confidence 35688999999999865 555 99999999999999987 33 3489999999999999999998875 5688888
Q ss_pred EeeC
Q 018395 113 LGDT 116 (356)
Q Consensus 113 i~~~ 116 (356)
+..+
T Consensus 109 v~~P 112 (119)
T 3lwc_A 109 VTYP 112 (119)
T ss_dssp EEEC
T ss_pred EECC
Confidence 7654
No 86
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.05 E-value=6.8e-10 Score=94.99 Aligned_cols=146 Identities=13% Similarity=0.024 Sum_probs=93.4
Q ss_pred ceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCC--
Q 018395 188 MAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDG-- 265 (356)
Q Consensus 188 ~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g-- 265 (356)
...++.+.++......|.+.+.+........ -++.+.++.+.||+...+|||. ..|+.||++|++++.+-+..+
T Consensus 8 ~v~~~~~~~~~~~~~~G~~~~~l~~~~~~g~--~~~~~~~~~~~pg~~~~~H~H~--~~E~~~Vl~G~~~~~~~~~~~~~ 83 (163)
T 1lr5_A 8 LVRDISQMPQSSYGIEGLSHITVAGALNHGM--KEVEVWLQTISPGQRTPIHRHS--CEEVFTVLKGKGTLLMGSSSLKY 83 (163)
T ss_dssp SEEEGGGSCCBCTTCTTEEEEEEECHHHHCC--SSEEEEEEEECTTCBCCEEEES--SCEEEEEEECCEEEEECCSSSSS
T ss_pred EecChHHCChhhccCCCcceEEEeccccCCC--CcEEEEEEEECCCCcCCCeECC--CCeEEEEEeCEEEEEECCccccc
Confidence 3455665555433344555554422111111 1477889999999999999995 579999999999999876321
Q ss_pred -ceEEEEEecCCcEEEEcCCcEEEEee-C-CCCeEEEEEEcCCCCceeccccccccccCCCHHHHHHHcCCCHHHHHH
Q 018395 266 -KRVLETTVKAGNLFIVPRFYVVSKIA-D-PDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQ 340 (356)
Q Consensus 266 -~~~~~~~l~~Gdv~vvP~g~~h~~~~-~-~~~~~~~~~~~~~~p~~~~laG~~s~l~~~p~~vl~~af~~~~~~~~~ 340 (356)
.+.-...|++||+++||+|.+|...+ + +++++++.+....... .+.. .+++..+....+...+.++...+++
T Consensus 84 ~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (163)
T 1lr5_A 84 PGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRPPAK-IFLY--DDWSMPHTAAVLKFPFVWDEDCFEA 158 (163)
T ss_dssp CCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEESSSCC-EEEE--SSTTSCGGGCEEESSCTTTHHHHHH
T ss_pred cCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEECCCCcc-cccc--cccccCCcCccceeccccccccccc
Confidence 00113579999999999999999954 6 6789999887554322 2222 2444444444444445566655554
No 87
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.05 E-value=2e-09 Score=90.74 Aligned_cols=83 Identities=13% Similarity=0.066 Sum_probs=69.0
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEe-eCCCCeEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKI-ADPDGLAWFS 300 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~-~~~~~~~~~~ 300 (356)
++++..+.+.||+...+|||+. ..|+.||++|++++.+-+......+...|++||+++||+|.+|... .+++++.++.
T Consensus 42 ~~~~~~~~l~pg~~~~~H~H~~-~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~ 120 (148)
T 2oa2_A 42 HLQVTLMSIQVGEDIGLEIHPH-LDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYS 120 (148)
T ss_dssp SCEEEEEEECTTCBCCCBCCTT-CEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred ceEEEEEEECCCCccCceECCC-CcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEE
Confidence 5778899999999999999997 8899999999999998764432223468999999999999999995 4677898888
Q ss_pred EEcCC
Q 018395 301 IITTP 305 (356)
Q Consensus 301 ~~~~~ 305 (356)
+....
T Consensus 121 i~~~~ 125 (148)
T 2oa2_A 121 IYAPP 125 (148)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 76543
No 88
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.03 E-value=2.8e-09 Score=97.56 Aligned_cols=78 Identities=13% Similarity=0.103 Sum_probs=69.0
Q ss_pred cCceEEEEEEecCCCcccCe-eeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPH-YCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH-~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
..++.+..++|+||+....| .|..+|.+|||+|++.+.+ ++ +.+.|++||+++++++.+|++.|.|+++++++.
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~---~~--~~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~ 236 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKL---EE--NYYPVTAGDIIWMGAHCPQWYGALGRNWSKYLL 236 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEE---TT--EEEEEETTCEEEECTTCCEEEEEESSSCEEEEE
T ss_pred CCCeEEEEEEECCCCccCcccCCCceEEEEEEECEEEEEE---CC--EEEEcCCCCEEEECCCCCEEEEcCCCCCEEEEE
Confidence 46889999999999999874 5588999999999999986 33 448999999999999999999999999999998
Q ss_pred EeeC
Q 018395 113 LGDT 116 (356)
Q Consensus 113 i~~~ 116 (356)
+-|-
T Consensus 237 ~kd~ 240 (246)
T 1sfn_A 237 YKDM 240 (246)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7664
No 89
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.03 E-value=6.6e-10 Score=101.54 Aligned_cols=78 Identities=12% Similarity=-0.028 Sum_probs=68.8
Q ss_pred CceEEEEEEecC-CCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 35 GNIGAAKLALEK-NGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 35 ~~~~~~~~~l~P-g~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
..+.+..++++| |+...+|+|..+|++||++|++.+.+ ++ ..+.|++||++++|+|.+|.+.|.++++++++.+
T Consensus 143 ~~~~~~~~~~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~i---~~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v 217 (243)
T 3h7j_A 143 DWVEIMLAKIPGNGGEMPFHKHRNEQIGICIGGGYDMTV---EG--CTVEMKFGTAYFCEPREDHGAINRSEKESKSINI 217 (243)
T ss_dssp TTEEEEEEEECTTTEEEEEECCSSEEEEEECSSCEEEEE---TT--EEEEECTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred ceeEEEEEEECCCCCcCCCEeCCCcEEEEEEECEEEEEE---CC--EEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 446677889999 99999999988899999999999987 33 3489999999999999999999999999999998
Q ss_pred eeCC
Q 018395 114 GDTS 117 (356)
Q Consensus 114 ~~~~ 117 (356)
+.+.
T Consensus 218 ~~p~ 221 (243)
T 3h7j_A 218 FFPP 221 (243)
T ss_dssp EESC
T ss_pred EcCC
Confidence 8753
No 90
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.03 E-value=1.7e-09 Score=104.25 Aligned_cols=90 Identities=17% Similarity=0.102 Sum_probs=73.7
Q ss_pred CCeEEEEeCCC-CCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCC
Q 018395 17 NGGSYHAWCPN-ELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFG 95 (356)
Q Consensus 17 ~~G~i~~~~~~-~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G 95 (356)
+|+.++..++. ..+.+. .+++....|+||+...+|+|...|++||++|+|++.| ++ +++++++||+++||++
T Consensus 249 ~G~~~~~~np~t~~~~~~--ti~~~~~~l~pG~~~~~H~h~~~ev~~v~~G~g~~~v---~~--~~~~~~~GD~~~vP~~ 321 (354)
T 2d40_A 249 DGYKMRYVNPVTGGYPMP--SMGAFLQLLPKGFASRVARTTDSTIYHVVEGSGQVII---GN--ETFSFSAKDIFVVPTW 321 (354)
T ss_dssp TBEEEEECCTTTSSCSSS--SCEEEEEEECTTCBCCCBEESSCEEEEEEEEEEEEEE---TT--EEEEEETTCEEEECTT
T ss_pred CCeEEEEeCCCcCCCCCC--cceeEEEEECCCCCCCceecCCcEEEEEEeCeEEEEE---CC--EEEEEcCCCEEEECCC
Confidence 56677777754 344443 4677788999999999999966699999999999998 33 4589999999999999
Q ss_pred cEEEEEecCCCcEEEEEEee
Q 018395 96 VVTWWYNKEDTELVVLFLGD 115 (356)
Q Consensus 96 ~~H~~~N~g~e~l~~l~i~~ 115 (356)
..|++.|+ +++.++++.+
T Consensus 322 ~~H~~~n~--e~~~l~~~~d 339 (354)
T 2d40_A 322 HGVSFQTT--QDSVLFSFSD 339 (354)
T ss_dssp CCEEEEEE--EEEEEEEEES
T ss_pred CeEEEEeC--CCEEEEEEcC
Confidence 99999994 6788888755
No 91
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.03 E-value=1.5e-09 Score=86.96 Aligned_cols=75 Identities=11% Similarity=0.108 Sum_probs=63.8
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEe
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLG 114 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~ 114 (356)
.++.+..+.+.||....+|+|...|++||++|++.+.+ ++ ..+.|++||++++|+|.+|.+.|. ++++++++.
T Consensus 36 ~~~~~~~~~~~~g~~~~~H~h~~~e~~~vl~G~~~~~i---~~--~~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~~i~ 108 (114)
T 2ozj_A 36 DRVQISLFSFADGESVSEEEYFGDTLYLILQGEAVITF---DD--QKIDLVPEDVLMVPAHKIHAIAGK--GRFKMLQIT 108 (114)
T ss_dssp SSEEEEEEEEETTSSCCCBCCSSCEEEEEEEEEEEEEE---TT--EEEEECTTCEEEECTTCCBEEEEE--EEEEEEEEE
T ss_pred CCceEEEEEECCCCccccEECCCCeEEEEEeCEEEEEE---CC--EEEEecCCCEEEECCCCcEEEEeC--CCcEEEEEE
Confidence 35677888899999999999999999999999999987 33 358999999999999999999996 357777765
Q ss_pred eC
Q 018395 115 DT 116 (356)
Q Consensus 115 ~~ 116 (356)
..
T Consensus 109 ~~ 110 (114)
T 2ozj_A 109 LI 110 (114)
T ss_dssp EC
T ss_pred Ec
Confidence 43
No 92
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.02 E-value=3.5e-09 Score=97.68 Aligned_cols=77 Identities=16% Similarity=0.200 Sum_probs=68.4
Q ss_pred cCceEEEEEEecCCCcccC-eeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALP-HYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~p-H~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
..++.+.+++++||+.... |.|..++.+|||+|+|++.+ ++ ..+++++||+++++++.+|++.|.|++++++|.
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~l---~~--~~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl~ 257 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYRL---GD--NWYPVQAGDVIWMAPFVPQWYAALGKTRSRYLL 257 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCSCCEEEEEEECEEEEEE---TT--EEEEEETTCEEEECTTCCEEEEEESSSCEEEEE
T ss_pred ccceEEEEEEECCCcCcCCceEcccceEEEEEeceEEEEE---CC--EEEEecCCCEEEECCCCcEEEEeCCCCCEEEEE
Confidence 5689999999999999986 56688899999999999986 33 348999999999999999999999999999997
Q ss_pred Eee
Q 018395 113 LGD 115 (356)
Q Consensus 113 i~~ 115 (356)
--|
T Consensus 258 ykd 260 (266)
T 4e2q_A 258 YKD 260 (266)
T ss_dssp EEE
T ss_pred Ecc
Confidence 544
No 93
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.00 E-value=1.3e-09 Score=90.62 Aligned_cols=73 Identities=16% Similarity=0.231 Sum_probs=61.5
Q ss_pred CceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 35 GNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
..+.+..++++|| ..||| ..+|++|||+|++++.+ ++ ..+.|++||+++||+|..|.+.|. ++++++++
T Consensus 55 ~~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~---~g--~~~~l~~GD~i~~p~g~~h~~~~~--~~~~~l~v 124 (133)
T 2pyt_A 55 SSMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRH---EG--ETMIAKAGDVMFIPKGSSIEFGTP--TSVRFLYV 124 (133)
T ss_dssp CSSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEE---TT--EEEEEETTCEEEECTTCEEEEEEE--EEEEEEEE
T ss_pred CcEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEE---CC--EEEEECCCcEEEECCCCEEEEEeC--CCEEEEEE
Confidence 3688999999999 45777 89999999999999986 33 347999999999999999999984 56888888
Q ss_pred eeCC
Q 018395 114 GDTS 117 (356)
Q Consensus 114 ~~~~ 117 (356)
..+.
T Consensus 125 ~~p~ 128 (133)
T 2pyt_A 125 AWPA 128 (133)
T ss_dssp EEST
T ss_pred EcCC
Confidence 7643
No 94
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.98 E-value=7e-09 Score=100.87 Aligned_cols=77 Identities=16% Similarity=0.135 Sum_probs=68.4
Q ss_pred cCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecC-CCcEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKE-DTELVVLF 112 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g-~e~l~~l~ 112 (356)
...+.+....|+||....+|.|..++++||++|+|.+.+ ++ +.+.+++||++++|+|..|.+.|.+ ++++.+++
T Consensus 291 ~~tl~~~~~~l~PG~~~~~HrH~~~~v~~VleG~G~~~V---~g--e~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~ 365 (394)
T 3bu7_A 291 MLTMGASMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIV---GG--KRFDWSEHDIFCVPAWTWHEHCNTQERDDACLFS 365 (394)
T ss_dssp SSSCEEEEEEECTTCBCCCEEESSCEEEEEEECCEEEEE---TT--EEEEECTTCEEEECTTCCEEEEECCSSCCEEEEE
T ss_pred CCeeeEEEEEECCCCcCCCcccCCcEEEEEEeCeEEEEE---CC--EEEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEE
Confidence 356888999999999999999988899999999998876 33 3489999999999999999999998 78999998
Q ss_pred Eee
Q 018395 113 LGD 115 (356)
Q Consensus 113 i~~ 115 (356)
+.+
T Consensus 366 i~D 368 (394)
T 3bu7_A 366 FND 368 (394)
T ss_dssp EES
T ss_pred eeC
Confidence 765
No 95
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=98.98 E-value=2.5e-07 Score=83.81 Aligned_cols=183 Identities=13% Similarity=0.119 Sum_probs=107.5
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEe
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLG 114 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~ 114 (356)
.+++++.+.+ .|......+ ..+|++|||+|++++.. ++ ....+++||+++||+|..|.|...+.- +.+++.
T Consensus 45 ~~~~~G~~~~-~g~~~v~~~-p~dE~~~VleG~~~lt~---~g--~~~~~~~Gd~~~ip~G~~~~w~~~~~~--~~~y~~ 115 (238)
T 3myx_A 45 QGIAAGIVEF-GTALSVEAY-PYTEMLVMHRGSVTLTS---GT--DSVTLSTGESAVIGRGTQVRIDAQPES--LWAFCA 115 (238)
T ss_dssp TSEEEEEEEE-CSEEEESSC-SSEEEEEEEESEEEEEE---TT--EEEEEETTCEEEECTTCCEEEEECTTE--EEEEEE
T ss_pred CCeEEEEEEe-ccccccccC-CCcEEEEEEEeEEEEEC---CC--eEEEEcCCCEEEECCCCEEEEEecCCe--EEEEEe
Confidence 4688888998 666554332 45799999999999975 33 347999999999999999999887654 333333
Q ss_pred eCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCceEEEcCCCCcCCCCCcccCCCceeeccC
Q 018395 115 DTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKGIVKLDANAKLPEPKKEHRDGMAFNCEE 194 (356)
Q Consensus 115 ~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~iv~~~~~~~~~~p~~~~~~~~~~~l~~ 194 (356)
.+. ...|.. ..|+++.....+ .|.. ...+--+..
T Consensus 116 ~~~-~~~p~~-----------------------------------------~~~~~i~~~~~l-~P~~---~p~p~~~l~ 149 (238)
T 3myx_A 116 STQ-ASGPDK-----------------------------------------SGITALDRLALL-TPSS---PPDPSIMIS 149 (238)
T ss_dssp ECS-CCSCCC-----------------------------------------CSEEEECTTCCC-EEEC---CCCGGGBSS
T ss_pred ccC-CCCCCC-----------------------------------------CccEEecCCCCC-CCCC---CCChhheec
Confidence 320 012211 012222211100 0000 000001112
Q ss_pred CCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEec
Q 018395 195 APLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVK 274 (356)
Q Consensus 195 ~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~ 274 (356)
..|... .+....+. +-.+++..-...||... + |+-. .+|++||++|+++++. .+|+. .+++
T Consensus 150 G~P~~~----~~~~~~~~-------~g~~~~GiW~~tpG~~~-~-~~~~-~~E~~~ILeG~v~lt~--~~G~~---~~~~ 210 (238)
T 3myx_A 150 PLPQCR----SNNLFEDT-------ASTLRIGVWDSTPYERI-S-RPHK-IHELMNLIEGRVVLSL--ENGSS---LTVN 210 (238)
T ss_dssp CCCCEE----EEEEEECS-------SSSCEEEEEEECCEEBC-C-EECS-SCEEEEEEECCEEEEE--TTSCE---EEEC
T ss_pred CCchhe----eeEEEECC-------CCCEEEeEEEeCCCEEE-C-CcCC-CCEEEEEEEeEEEEEe--CCCCE---EEEC
Confidence 222210 11111110 11366777778888733 2 2224 6799999999998864 35644 5799
Q ss_pred CCcEEEEcCCcEEEEee
Q 018395 275 AGNLFIVPRFYVVSKIA 291 (356)
Q Consensus 275 ~Gdv~vvP~g~~h~~~~ 291 (356)
+||+++||+|+.-....
T Consensus 211 aGD~~~~P~G~~~tWev 227 (238)
T 3myx_A 211 TGDTVFVAQGAPCKWTS 227 (238)
T ss_dssp TTCEEEECTTCEEEEEE
T ss_pred CCCEEEECCCCEEEEEE
Confidence 99999999999876643
No 96
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.98 E-value=2.3e-09 Score=86.20 Aligned_cols=79 Identities=13% Similarity=0.087 Sum_probs=60.3
Q ss_pred ccCceEEEEEEecCCCcccC---eeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCC-cE
Q 018395 33 RQGNIGAAKLALEKNGFALP---HYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDT-EL 108 (356)
Q Consensus 33 ~~~~~~~~~~~l~Pg~~~~p---H~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e-~l 108 (356)
.+.++.+.++. .+|....+ |.|..+|++||++|++++.+ +++...+.|++||.++||+|.+|.+.|.+++ ++
T Consensus 27 ~~~~~~i~~i~-~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~---~~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~ 102 (112)
T 2opk_A 27 ERKGLKIERII-SNGQASPPGFWYDSPQDEWVMVVSGSAGIEC---EGDTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPT 102 (112)
T ss_dssp EETTEEEEEEE-ESSCCCCTTCCBCCSSEEEEEEEESCEEEEE---TTCSSCEEECTTEEEEECTTCCEEEEEECSSSCE
T ss_pred cCCCEEEEEEE-eCCccCCCCccccCCccEEEEEEeCeEEEEE---CCEEEEEEECCCCEEEECCCCcEEEEeCCCCCCE
Confidence 34567777775 45655555 44489999999999999987 2322117999999999999999999998876 67
Q ss_pred EEEEEee
Q 018395 109 VVLFLGD 115 (356)
Q Consensus 109 ~~l~i~~ 115 (356)
.+++++.
T Consensus 103 ~~l~v~~ 109 (112)
T 2opk_A 103 VWLAVHC 109 (112)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7788765
No 97
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=98.97 E-value=5e-09 Score=81.55 Aligned_cols=75 Identities=12% Similarity=-0.009 Sum_probs=64.4
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCCCeEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPDGLAWFS 300 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~~~~ 300 (356)
++.+..+.+.||+...+|||+. ..|+.||++|++++.+- + + ...|++||++++|+|.+|...+ +++++.++.
T Consensus 27 ~~~~~~~~~~pg~~~~~H~H~~-~~e~~~v~~G~~~~~~~---~-~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~ 99 (105)
T 1v70_A 27 RMLYDLYALLPGQAQKVHVHEG-SDKVYYALEGEVVVRVG---E-E--EALLAPGMAAFAPAGAPHGVRNESASPALLLV 99 (105)
T ss_dssp TEEEEEEEECTTCEEEEECCSS-CEEEEEEEESCEEEEET---T-E--EEEECTTCEEEECTTSCEEEECCSSSCEEEEE
T ss_pred ceEEEEEEECCCCcCCccCCCC-CcEEEEEEeCEEEEEEC---C-E--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 5788999999999999999987 78999999999998763 2 2 3579999999999999999855 667888888
Q ss_pred EEc
Q 018395 301 IIT 303 (356)
Q Consensus 301 ~~~ 303 (356)
+..
T Consensus 100 v~~ 102 (105)
T 1v70_A 100 VTA 102 (105)
T ss_dssp EEE
T ss_pred EeC
Confidence 764
No 98
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.96 E-value=3.2e-09 Score=90.12 Aligned_cols=89 Identities=12% Similarity=0.076 Sum_probs=66.5
Q ss_pred eeCCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEe--CeEEEEEEcCCCceEEEEEcCCCEE
Q 018395 14 YGGNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQ--GSGVAGIVLPEKEEKVVAIKKGDGI 90 (356)
Q Consensus 14 ~~~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~--G~~~~~vv~~~~~~~~~~l~~GDv~ 90 (356)
.+..+|..+.....+ ....+++..++ ++....+||| ..+|++||++ |++.+.+ ++ +.+.|++||++
T Consensus 28 ~~~~~G~srR~l~~~----~~fp~sv~~v~--~g~~~~~H~H~~~~E~~yVLe~~G~g~v~i---dg--e~~~l~~GD~v 96 (157)
T 4h7l_A 28 VACPCGWAQRAFGHD----AGTSVSVHYTQ--ITKAARTHYHREHQEIYVVLDHAAHATIEL---NG--QSYPLTKLLAI 96 (157)
T ss_dssp EEETTEEEEEESCGG----GCCSCEEEEEE--ECSCCCCBBCSSCEEEEEEEEECTTCEEEE---TT--EEEECCTTEEE
T ss_pred ccCCCCeeeEEeEcC----CCCcEEEEEEe--CCCCccceECCCCcEEEEEEecCcEEEEEE---CC--EEEEeCCCCEE
Confidence 345778877655422 11223444444 4556789999 7789999999 9999987 33 34899999999
Q ss_pred EeCCCcEEEEEecCCCcEEEEEEeeCC
Q 018395 91 ALPFGVVTWWYNKEDTELVVLFLGDTS 117 (356)
Q Consensus 91 ~iP~G~~H~~~N~g~e~l~~l~i~~~~ 117 (356)
+||+|..|++.+ +++++++..+.
T Consensus 97 ~IPpg~~H~i~g----~l~~L~I~~Pp 119 (157)
T 4h7l_A 97 SIPPLVRHRIVG----EATIINIVSPP 119 (157)
T ss_dssp EECTTCCEEEES----CEEEEEEEESS
T ss_pred EECCCCeEeeEC----CEEEEEEECCC
Confidence 999999999983 59999988754
No 99
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=98.95 E-value=6.7e-09 Score=91.39 Aligned_cols=83 Identities=13% Similarity=0.246 Sum_probs=69.6
Q ss_pred CceeEEEEecCCCe------eccccccc-CCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEE-eeCC
Q 018395 222 GCGADLVRLDGKAM------CSPGFSCD-SALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSK-IADP 293 (356)
Q Consensus 222 ~~s~~~v~l~~g~~------~~PH~h~~-~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~-~~~~ 293 (356)
++.+..+.|.||+. ..+|||+. +..|+.||++|++.+.+-+..|+ .+...|++||+++||+|.+|.. |.++
T Consensus 66 ~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~-~~~~~l~~GD~v~ip~g~~H~~~N~g~ 144 (190)
T 1x82_A 66 DLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGD-AKWISMEPGTVVYVPPYWAHRTVNIGD 144 (190)
T ss_dssp CEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCC-EEEEEECTTCEEEECTTCEEEEEECSS
T ss_pred CeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCc-EEEEEECCCcEEEECCCCeEEEEECCc
Confidence 46678889999998 77999983 15799999999999999887664 3567899999999999999998 4578
Q ss_pred CCeEEEEEEcCC
Q 018395 294 DGLAWFSIITTP 305 (356)
Q Consensus 294 ~~~~~~~~~~~~ 305 (356)
++++++++....
T Consensus 145 ~~~~~l~v~~~~ 156 (190)
T 1x82_A 145 EPFIFLAIYPAD 156 (190)
T ss_dssp SCEEEEEEEETT
T ss_pred ccEEEEEEECCC
Confidence 889999887544
No 100
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.94 E-value=3.5e-09 Score=83.68 Aligned_cols=76 Identities=16% Similarity=0.117 Sum_probs=62.1
Q ss_pred cCceEEEEEEecCCCcccCeeeC-CCEE-EEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYCD-SARV-AYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVL 111 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h~-a~e~-~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l 111 (356)
+.++.+..+++.||....+|+|. ..|+ +||++|++++.+ . ++ ..+.|++||++++|+|..|++.|.++ .+++
T Consensus 30 ~~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~-~-~~--~~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l 103 (110)
T 2q30_A 30 SENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVG-D-GD--AVIPAPRGAVLVAPISTPHGVRAVTD--MKVL 103 (110)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEEC-G-GG--CEEEECTTEEEEEETTSCEEEEESSS--EEEE
T ss_pred CCCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEe-C-CC--EEEEECCCCEEEeCCCCcEEEEEcCC--cEEE
Confidence 34678889999999999999995 4788 899999999875 1 12 34899999999999999999999865 4566
Q ss_pred EEee
Q 018395 112 FLGD 115 (356)
Q Consensus 112 ~i~~ 115 (356)
.++.
T Consensus 104 ~~~~ 107 (110)
T 2q30_A 104 VTIA 107 (110)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 6554
No 101
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.94 E-value=3e-09 Score=90.82 Aligned_cols=79 Identities=13% Similarity=0.188 Sum_probs=66.9
Q ss_pred CceeEEEEecCCC-eecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCC-cEEEEe-eCCCCeEE
Q 018395 222 GCGADLVRLDGKA-MCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRF-YVVSKI-ADPDGLAW 298 (356)
Q Consensus 222 ~~s~~~v~l~~g~-~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g-~~h~~~-~~~~~~~~ 298 (356)
++++..+.+.||+ ...+|||+. ..|+.||++|++.+.+-+ + ...|++||+++||+| .+|... .+++++++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~-~~E~~~Vl~G~~~~~~~~----~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~ 117 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHY-EEEAVYVLSGKGTLTMEN----D--QYPIAPGDFVGFPCHAAAHSISNDGTETLVC 117 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESS-CCEEEEEEESCEEEEETT----E--EEEECTTCEEEECTTSCCEEEECCSSSCEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCC-CCEEEEEEEEEEEEEECC----E--EEEeCCCCEEEECCCCceEEeEeCCCCCEEE
Confidence 4789999999999 589999987 899999999999998532 2 357999999999997 999994 47788999
Q ss_pred EEEEcCCCC
Q 018395 299 FSIITTPNP 307 (356)
Q Consensus 299 ~~~~~~~~p 307 (356)
+.+.+...+
T Consensus 118 l~v~~p~~~ 126 (162)
T 3l2h_A 118 LVIGQRLDQ 126 (162)
T ss_dssp EEEEECCSE
T ss_pred EEEECCCCC
Confidence 998766554
No 102
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.91 E-value=1.4e-08 Score=96.37 Aligned_cols=72 Identities=13% Similarity=0.119 Sum_probs=61.0
Q ss_pred EEEEEecC-CCcccCeeeC-CCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeC
Q 018395 39 AAKLALEK-NGFALPHYCD-SARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDT 116 (356)
Q Consensus 39 ~~~~~l~P-g~~~~pH~h~-a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~ 116 (356)
...+++.| |....+|||. .+|++||++|++++.+ ++ ..+.|++||++++|++.+|++.|.++ ++++++++..
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i---~~--~~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~ 292 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWT---DG--QEIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVP 292 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEE---TT--EEEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEES
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEE---CC--EEEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcC
Confidence 44556666 6777899995 8999999999999987 33 45899999999999999999999988 7999988754
No 103
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.90 E-value=2.9e-09 Score=97.06 Aligned_cols=81 Identities=11% Similarity=0.069 Sum_probs=66.0
Q ss_pred cCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEE-------ccC------C-ceEEEEEecCCcEEEEcCCcE
Q 018395 221 VGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIV-------GPD------G-KRVLETTVKAGNLFIVPRFYV 286 (356)
Q Consensus 221 l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv-------~~~------g-~~~~~~~l~~Gdv~vvP~g~~ 286 (356)
.++++..+.+.||+...||||++ ..|+.||++|++++.+- +.. | .+++...+++||+++||+|.+
T Consensus 41 ~~~~~~~~~~~PG~~~~~H~H~~-~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~ 119 (239)
T 2xlg_A 41 IGFAIAHAQIPPGGGPMPHIHYF-INEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYM 119 (239)
T ss_dssp EEEEEEEEEECTTCSCCSEEESS-EEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEE
T ss_pred CCEEEEEEEECCCCcCCCeECCC-ccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCC
Confidence 35788999999999999999998 99999999999999771 111 1 134456899999999999999
Q ss_pred EEE-eeCCCCeEE-EEEE
Q 018395 287 VSK-IADPDGLAW-FSII 302 (356)
Q Consensus 287 h~~-~~~~~~~~~-~~~~ 302 (356)
|.. |.+++++++ +.++
T Consensus 120 H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 120 HGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EEEECCSSSCEEEEEEEE
T ss_pred EEEEeCCCCCEEEEEEEE
Confidence 999 557777888 6665
No 104
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.89 E-value=1.4e-08 Score=80.29 Aligned_cols=77 Identities=18% Similarity=0.144 Sum_probs=65.0
Q ss_pred CceeEEEEecCCCeeccc--ccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCCCeEE
Q 018395 222 GCGADLVRLDGKAMCSPG--FSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPDGLAW 298 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH--~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~~ 298 (356)
++.+..+.+.||+...+| ||++ ..|+.||++|++++.+- + + ...|++||++++|+|.+|...+ +++++.+
T Consensus 20 ~~~~~~~~~~pg~~~~~h~~~H~~-~~e~~~vl~G~~~~~~~---~-~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~ 92 (113)
T 2gu9_A 20 QVQAAEMVIAPGDREGGPDNRHRG-ADQWLFVVDGAGEAIVD---G-H--TQALQAGSLIAIERGQAHEIRNTGDTPLKT 92 (113)
T ss_dssp TEEEEEEEECTTCEEECCCSSSCC-CEEEEEEEECCEEEEET---T-E--EEEECTTEEEEECTTCCEEEECCSSSCEEE
T ss_pred cEEEEEEEECCCCccCCcccccCC-CcEEEEEEeCEEEEEEC---C-E--EEEeCCCCEEEECCCCcEEeEcCCCCCEEE
Confidence 578899999999999988 9987 78999999999998872 2 2 3579999999999999999855 6778888
Q ss_pred EEEEcCC
Q 018395 299 FSIITTP 305 (356)
Q Consensus 299 ~~~~~~~ 305 (356)
+.+....
T Consensus 93 ~~v~~~~ 99 (113)
T 2gu9_A 93 VNFYHPP 99 (113)
T ss_dssp EEEEESC
T ss_pred EEEECCC
Confidence 8876543
No 105
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.89 E-value=1.7e-08 Score=85.33 Aligned_cols=72 Identities=14% Similarity=0.248 Sum_probs=60.3
Q ss_pred ceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEe
Q 018395 36 NIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLG 114 (356)
Q Consensus 36 ~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~ 114 (356)
.++++.++++ ++ ..||| ..+|+.||++|++.+.+ ++ .++.|++||+++||+|..|.+.|. ++++++++.
T Consensus 65 ~~s~g~~~~e-~~--~~~~~~~~eE~~yVLeG~~~l~i---~g--~~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V~ 134 (151)
T 4axo_A 65 RLGCGMMEMK-ET--TFDWTLNYDEIDYVIDGTLDIII---DG--RKVSASSGELIFIPKGSKIQFSVP--DYARFIYVT 134 (151)
T ss_dssp SCEEEEEEEE-EE--EEEEECSSEEEEEEEEEEEEEEE---TT--EEEEEETTCEEEECTTCEEEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEEc-Cc--cccEeCCCcEEEEEEEeEEEEEE---CC--EEEEEcCCCEEEECCCCEEEEEeC--CCEEEEEEE
Confidence 6888888887 33 35677 89999999999999986 33 348999999999999999999997 579999987
Q ss_pred eCC
Q 018395 115 DTS 117 (356)
Q Consensus 115 ~~~ 117 (356)
.+.
T Consensus 135 ~P~ 137 (151)
T 4axo_A 135 YPA 137 (151)
T ss_dssp ECS
T ss_pred CCC
Confidence 754
No 106
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.89 E-value=6.3e-09 Score=97.00 Aligned_cols=79 Identities=18% Similarity=0.173 Sum_probs=69.8
Q ss_pred cCceEEEEEEecCCCcccC-eeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALP-HYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~p-H~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
..++.+..++|+||+.... |.|.-++.+|||+|++.+.+ ++ +.++|++||++++++|.+|++.|.|+++++++.
T Consensus 188 ~~~~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~---~~--~~~~v~~GD~~~~~~~~~h~~~n~g~~~~~yl~ 262 (278)
T 1sq4_A 188 RHDMHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRL---NQ--DWVEVEAGDFMWLRAFCPQACYSGGPGRFRYLL 262 (278)
T ss_dssp TCSEEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEE---TT--EEEEEETTCEEEEEESCCEEEECCSSSCEEEEE
T ss_pred CCCeEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEE---CC--EEEEeCCCCEEEECCCCCEEEEcCCCCCEEEEE
Confidence 4689999999999999986 45577899999999999976 33 448999999999999999999999999999999
Q ss_pred EeeCC
Q 018395 113 LGDTS 117 (356)
Q Consensus 113 i~~~~ 117 (356)
+.|-+
T Consensus 263 ~~d~n 267 (278)
T 1sq4_A 263 YKDVN 267 (278)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 88854
No 107
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=98.84 E-value=2e-08 Score=86.50 Aligned_cols=95 Identities=11% Similarity=0.104 Sum_probs=73.5
Q ss_pred CCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEc
Q 018395 203 NGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVP 282 (356)
Q Consensus 203 ~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP 282 (356)
.|.....+...+.. ....++.+..+.+.||+...+|||+ ..|+.||++|++.+.+-+ + ...|++||+++||
T Consensus 37 ~g~~~~~L~~~~~g-~~~~~~~~~~~~l~pG~~~~~H~H~--~~E~~~Vl~G~~~~~i~~----~--~~~l~~Gd~i~ip 107 (167)
T 3ibm_A 37 SGARRQTLVGRPAG-QEAPAFETRYFEVEPGGYTTLERHE--HTHVVMVVRGHAEVVLDD----R--VEPLTPLDCVYIA 107 (167)
T ss_dssp CCEEEEEEECTTTT-CCSSSEEEEEEEECTTCBCCCBBCS--SCEEEEEEESEEEEEETT----E--EEEECTTCEEEEC
T ss_pred CCcEEEEEECCCCC-CCCCcEEEEEEEECCCCCCCCccCC--CcEEEEEEeCEEEEEECC----E--EEEECCCCEEEEC
Confidence 35555555444331 1223577899999999999999995 689999999999988632 2 3579999999999
Q ss_pred CCcEEEE-eeC-CCCeEEEEEEcCCC
Q 018395 283 RFYVVSK-IAD-PDGLAWFSIITTPN 306 (356)
Q Consensus 283 ~g~~h~~-~~~-~~~~~~~~~~~~~~ 306 (356)
+|.+|.. +.+ ++++.++++....+
T Consensus 108 ~~~~H~~~n~~~~~~~~~l~i~~~~~ 133 (167)
T 3ibm_A 108 PHAWHQIHATGANEPLGFLCIVDSDR 133 (167)
T ss_dssp TTCCEEEEEESSSCCEEEEEEEESSC
T ss_pred CCCcEEEEeCCCCCCEEEEEEEeCCc
Confidence 9999999 557 78899999876554
No 108
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.83 E-value=9.3e-09 Score=92.92 Aligned_cols=74 Identities=20% Similarity=0.246 Sum_probs=63.4
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEe
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLG 114 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~ 114 (356)
..+.+..++++||+...+|+|..+|++||++|++.+.+ ++ ..+.|++||.+++|+|.+|++.|. .++++++.+.
T Consensus 151 ~~~~~~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i---~g--~~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~~ 224 (227)
T 3rns_A 151 PNLVMTIMSFWKGESLDPHKAPGDALVTVLDGEGKYYV---DG--KPFIVKKGESAVLPANIPHAVEAE-TENFKMLLIL 224 (227)
T ss_dssp TTEEEEEEEECTTCEEEEECCSSEEEEEEEEEEEEEEE---TT--EEEEEETTEEEEECTTSCEEEECC-SSCEEEEEEE
T ss_pred CCeEEEEEEECCCCccCCEECCCcEEEEEEeEEEEEEE---CC--EEEEECCCCEEEECCCCcEEEEeC-CCCEEEEEEE
Confidence 46888999999999999999988999999999999986 33 358999999999999999999993 4456666543
No 109
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=98.83 E-value=3e-08 Score=80.59 Aligned_cols=73 Identities=14% Similarity=0.098 Sum_probs=60.1
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
.+++..+++.||+-. |||.. ..|+.||++|++++++ +|+. ..|++||+++||+|..|..++..+.++++.+
T Consensus 39 ~~~~~~~~~~pG~~~--~~H~~-~~E~~~Vl~G~~~~~~---~g~~---~~l~~GD~v~ip~g~~H~~~~~~~~~~~l~v 109 (119)
T 3lwc_A 39 PITIGYGRYAPGQSL--TETMA-VDDVMIVLEGRLSVST---DGET---VTAGPGEIVYMPKGETVTIRSHEEGALTAYV 109 (119)
T ss_dssp CCEEEEEEECTTCEE--EEECS-SEEEEEEEEEEEEEEE---TTEE---EEECTTCEEEECTTCEEEEEEEEEEEEEEEE
T ss_pred CEEEEEEEECCCCCc--CccCC-CCEEEEEEeCEEEEEE---CCEE---EEECCCCEEEECCCCEEEEEcCCCCeEEEEE
Confidence 488999999999754 77776 8999999999999998 3433 5799999999999999999775566777665
Q ss_pred Ec
Q 018395 302 IT 303 (356)
Q Consensus 302 ~~ 303 (356)
.+
T Consensus 110 ~~ 111 (119)
T 3lwc_A 110 TY 111 (119)
T ss_dssp EE
T ss_pred EC
Confidence 53
No 110
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.83 E-value=3.3e-08 Score=80.32 Aligned_cols=77 Identities=14% Similarity=0.139 Sum_probs=64.5
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
++.+.++.+.||+...+|||+. .|+.||++|++++.+- + + ...|++||++++|+|.+|...+..+++.++.+
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~~--~e~~~vl~G~~~~~~~---~-~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~l~v 111 (126)
T 4e2g_A 40 NLMLNWVRIEPNTEMPAHEHPH--EQAGVMLEGTLELTIG---E-E--TRVLRPGMAYTIPGGVRHRARTFEDGCLVLDI 111 (126)
T ss_dssp SCEEEEEEECTTCEEEEECCSS--EEEEEEEEECEEEEET---T-E--EEEECTTEEEEECTTCCEEEECCTTCEEEEEE
T ss_pred CeEEEEEEECCCCcCCCccCCC--ceEEEEEEeEEEEEEC---C-E--EEEeCCCCEEEECCCCcEEeEECCCCEEEEEE
Confidence 6889999999999999999984 7999999999999872 2 2 25799999999999999999664447888887
Q ss_pred EcCCC
Q 018395 302 ITTPN 306 (356)
Q Consensus 302 ~~~~~ 306 (356)
+...+
T Consensus 112 ~~p~~ 116 (126)
T 4e2g_A 112 FSPPR 116 (126)
T ss_dssp EESCC
T ss_pred ECCCC
Confidence 75543
No 111
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=98.81 E-value=3.9e-09 Score=82.89 Aligned_cols=76 Identities=13% Similarity=0.043 Sum_probs=63.8
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEE-eeCCCCeEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSK-IADPDGLAWFS 300 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~-~~~~~~~~~~~ 300 (356)
.+.+.++.+.||+-...|+|+. ..++.||++|+++++.- +|.. ....+++||.+++|+|..|.+ |.|+++++|+.
T Consensus 16 ~~rV~r~~i~PG~~~~~H~H~~-~~e~~~v~~G~~~v~~~--d~~~-~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~Ie 91 (98)
T 3lag_A 16 EVRVTEWRLPPGSATGHHTHGM-DYVVVPMADGEMTIVAP--DGTR-SLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCS-CEEEEESSCBC-CEECT--TSCE-ECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEE
T ss_pred eEEEEEEEECCCCccCcEECCC-cEEEEEEeccEEEEEeC--CCce-EEEEecCCcEEEEcCCCcEECEECCCCeEEEEE
Confidence 4778999999999999999998 88999999999987653 3332 234789999999999999999 56899999998
Q ss_pred E
Q 018395 301 I 301 (356)
Q Consensus 301 ~ 301 (356)
+
T Consensus 92 V 92 (98)
T 3lag_A 92 I 92 (98)
T ss_dssp E
T ss_pred E
Confidence 7
No 112
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.81 E-value=9.3e-09 Score=80.13 Aligned_cols=76 Identities=11% Similarity=0.002 Sum_probs=63.5
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEe-eCCCCeEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKI-ADPDGLAWFS 300 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~-~~~~~~~~~~ 300 (356)
.+.+.++.+.||+-..+|.|+. ..|+.||++|++++++-+ |.+ ...|++||.+++|+|.+|... .++++++++.
T Consensus 17 ~~~~~~~~~~Pg~~~~~H~H~~-~~e~~~Vl~G~~~~~~~~--g~~--~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~ 91 (97)
T 2fqp_A 17 RVKVTEWRFPPGGETGWHRHSM-DYVVVPMTTGPLLLETPE--GSV--TSQLTRGVSYTRPEGVEHNVINPSDTEFVFVE 91 (97)
T ss_dssp SEEEEEEEECTTCBCCSEECCS-CEEEEESSCEEEEEEETT--EEE--EEEECTTCCEEECTTCEEEEECCSSSCEEEEE
T ss_pred eEEEEEEEECCCCCCCCEECCC-CcEEEEEeecEEEEEeCC--CCE--EEEEcCCCEEEeCCCCcccCEeCCCCcEEEEE
Confidence 5778999999999999999987 778999999999988643 212 357999999999999999994 4778888887
Q ss_pred EE
Q 018395 301 II 302 (356)
Q Consensus 301 ~~ 302 (356)
+-
T Consensus 92 v~ 93 (97)
T 2fqp_A 92 IE 93 (97)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 113
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.79 E-value=1.8e-08 Score=89.53 Aligned_cols=93 Identities=10% Similarity=-0.044 Sum_probs=74.6
Q ss_pred CCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCC
Q 018395 16 GNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFG 95 (356)
Q Consensus 16 ~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G 95 (356)
.+.+..+..-+.. ......+.++.+.+.||...+.|.|..+|++||++|++.+.+- ++ ....+++||++++|+|
T Consensus 113 ~~~a~~elvGP~g--~~~s~~l~lG~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v~--~g--~~~~l~pGd~v~ipsg 186 (217)
T 4b29_A 113 NRFGWFELAGPSG--HFLTQSLRVTVGYWGPGLDYGWHEHLPEELYSVVSGRALFHLR--NA--PDLMLEPGQTRFHPAN 186 (217)
T ss_dssp HHEEEEEEEETTS--SEECSSCEEEEEEECSSCEEEEEECSSEEEEEEEEECEEEEET--TS--CCEEECTTCEEEECTT
T ss_pred hCceEEEEECCCC--CCCCCeEEEEEEEECCCCcCCCCCCCCceEEEEEeCCEEEEEC--CC--CEEecCCCCEEEcCCC
Confidence 3455666554432 2455789999999999999999999999999999999999872 12 3379999999999999
Q ss_pred cEEEEEecCCCcEEEEEEee
Q 018395 96 VVTWWYNKEDTELVVLFLGD 115 (356)
Q Consensus 96 ~~H~~~N~g~e~l~~l~i~~ 115 (356)
.+|++. ++++++..+.+..
T Consensus 187 v~Ha~r-t~dePllalwvW~ 205 (217)
T 4b29_A 187 APHAMT-TLTDPILTLVLWR 205 (217)
T ss_dssp CCEEEE-CCSSCEEEEEEEE
T ss_pred CceeEE-ECCccEEEEEEEe
Confidence 999998 5789987666654
No 114
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.78 E-value=3.8e-08 Score=84.35 Aligned_cols=97 Identities=15% Similarity=0.081 Sum_probs=74.3
Q ss_pred cCCCcEEEEeCCCCCCCccccCceeEEEEecCCCee-cccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEE
Q 018395 201 IKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMC-SPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLF 279 (356)
Q Consensus 201 ~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~-~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~ 279 (356)
....|..+..-. +....-.+.+..+.|.||+.. .+|||.. ..|+.||++|++++.+-+ + ...|++||++
T Consensus 24 ~~~~G~~~~~l~---~~~~~~~~~~~~~~l~pG~~~~~~H~H~~-~eE~~~Vl~G~~~~~~~~----~--~~~l~~GD~i 93 (163)
T 3i7d_A 24 AAMDGRSSLRLG---DAGGLSQFGVNLVRLEPGAKSSLRHYHME-QDEFVMVTEGALVLVDDQ----G--EHPMVPGDCA 93 (163)
T ss_dssp GGGTTEEEEEHH---HHTTCCSEEEEEEEECTTCBSSSSEEESS-CCEEEEEEESCEEEEETT----E--EEEECTTCEE
T ss_pred ccCCCeEEEEcc---cCCCCCeEEEEEEEECCCCcCCCCccCCC-CcEEEEEEECEEEEEECC----E--EEEeCCCCEE
Confidence 344666655432 222223578999999999965 7999987 789999999999988633 2 3579999999
Q ss_pred EEcCC--cEEEEee-CCCCeEEEEEEcCCCC
Q 018395 280 IVPRF--YVVSKIA-DPDGLAWFSIITTPNP 307 (356)
Q Consensus 280 vvP~g--~~h~~~~-~~~~~~~~~~~~~~~p 307 (356)
+||+| .+|...| ++++++++.+.+....
T Consensus 94 ~ip~~~~~~H~~~n~~~~~~~~l~v~~p~~~ 124 (163)
T 3i7d_A 94 AFPAGDPNGHQFVNRTDAPATFLVVGTRTPT 124 (163)
T ss_dssp EECTTCCCCBEEECCSSSCEEEEEEEECCSC
T ss_pred EECCCCCcceEEEECCCCCEEEEEEECCCCC
Confidence 99999 9999854 7788999998765543
No 115
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.78 E-value=9.6e-09 Score=81.28 Aligned_cols=69 Identities=12% Similarity=0.128 Sum_probs=53.9
Q ss_pred EEEEEEecCCCcccCeeeCC-CEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 38 GAAKLALEKNGFALPHYCDS-ARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 38 ~~~~~~l~Pg~~~~pH~h~a-~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
....+.+.||.. .+|+|.. .|++||++|++.+.+ ++. ..+.|++||++++|+|..|++.|. ++++++.+
T Consensus 29 ~~~~~~~~~g~~-~~H~H~~~~E~~~Vl~G~~~~~~---~~~-~~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i 98 (107)
T 2i45_A 29 FQFHLVKLLGDY-GWHTHGYSDKVLFAVEGDMAVDF---ADG-GSMTIREGEMAVVPKSVSHRPRSE--NGCSLVLI 98 (107)
T ss_dssp EEEEEEEEEEEC-CCBCC--CCEEEEESSSCEEEEE---TTS-CEEEECTTEEEEECTTCCEEEEEE--EEEEEEEE
T ss_pred CEEEEEECCCCC-cceeCCCCCEEEEEEeCEEEEEE---CCC-cEEEECCCCEEEECCCCcEeeEeC--CCeEEEEE
Confidence 345677788874 5999954 999999999999986 221 248999999999999999999995 35677654
No 116
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=98.77 E-value=5.2e-08 Score=79.32 Aligned_cols=74 Identities=14% Similarity=0.258 Sum_probs=62.9
Q ss_pred cCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCCCeEEE
Q 018395 221 VGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPDGLAWF 299 (356)
Q Consensus 221 l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~~~ 299 (356)
..+++..+.+.||....+||| + ..|+.||++|++++.+ ++ + ...|++||+++||+|.+|...+ ++++++++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H-~-~~Ei~~v~~G~~~~~i---~~-~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~ 103 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSH-N-EYELFIVIQGNAIIRI---ND-E--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFY 103 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCC-S-SEEEEEEEESEEEEEE---TT-E--EEEEETTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred CCcEEEEEEECCCCccCCEec-C-CeEEEEEEeCEEEEEE---CC-E--EEEECCCcEEEECCCCcEEeEeCCCCCEEEE
Confidence 357889999999999999999 4 7899999999999887 22 2 3579999999999999999955 57788887
Q ss_pred EEE
Q 018395 300 SII 302 (356)
Q Consensus 300 ~~~ 302 (356)
.+.
T Consensus 104 ~i~ 106 (128)
T 4i4a_A 104 TIW 106 (128)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 117
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=98.77 E-value=2.6e-08 Score=84.92 Aligned_cols=78 Identities=17% Similarity=0.309 Sum_probs=66.0
Q ss_pred cCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCCCeEEE
Q 018395 221 VGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPDGLAWF 299 (356)
Q Consensus 221 l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~~~ 299 (356)
.++.+..+.+.||+...+|||+. .|+.||++|++++.+ ++ + ...|++||+++||+|.+|...+ ++++++++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~~--~E~~~Vl~G~~~v~v---~g-~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l 113 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHAH--VHAVMIHRGHGQCLV---GE-T--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFL 113 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS--CEEEEEEEEEEEEEE---TT-E--EEEEETTCEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCceeCCC--cEEEEEEeCEEEEEE---CC-E--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 35788899999999999999975 599999999999985 22 2 3579999999999999999954 77899999
Q ss_pred EEEcCCC
Q 018395 300 SIITTPN 306 (356)
Q Consensus 300 ~~~~~~~ 306 (356)
++.....
T Consensus 114 ~i~~~~~ 120 (156)
T 3kgz_A 114 CVVNAAR 120 (156)
T ss_dssp EEEESSC
T ss_pred EEEeCCC
Confidence 9876554
No 118
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=98.76 E-value=3e-08 Score=82.34 Aligned_cols=81 Identities=15% Similarity=0.172 Sum_probs=65.8
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCCCeEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPDGLAWFS 300 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~~~~ 300 (356)
++++..+.+.||+...+|||+. .|++||++|++++.+... + + ...|++||++++|+|.+|...+ +++++.++.
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~--~e~~~vl~G~~~~~~~~~-~-~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~ 111 (145)
T 3ht1_A 38 RFVLTEFEVSPNGSTPPHFHEW--EHEIYVLEGSMGLVLPDQ-G-R--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLV 111 (145)
T ss_dssp SEEEEEEEEEEEEECCCEECSS--CEEEEEEEECEEEEEGGG-T-E--EEEECTTCEEEECTTCCBEEECCTTCCEEEEE
T ss_pred cEEEEEEEECCCCcCCCccCCC--ceEEEEEEeEEEEEEeEC-C-E--EEEECCCCEEEECCCCeEEeEcCCCCCEEEEE
Confidence 5788899999999999999985 578899999999884222 2 2 3579999999999999999955 677899998
Q ss_pred EEcCCCCc
Q 018395 301 IITTPNPI 308 (356)
Q Consensus 301 ~~~~~~p~ 308 (356)
+.....+.
T Consensus 112 i~~~~~~~ 119 (145)
T 3ht1_A 112 VAPCERPP 119 (145)
T ss_dssp EEESCCCC
T ss_pred EECCCCCC
Confidence 87665543
No 119
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.76 E-value=6.2e-08 Score=77.39 Aligned_cols=76 Identities=21% Similarity=0.218 Sum_probs=62.9
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
++.+..+.+.||+...+|||+ ..|+.||++|++.+.+ ++ + ...|++||++++|+|.+|...+.. +++++.+
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~--~~e~~~vl~G~~~~~~---~~-~--~~~l~~Gd~~~ip~~~~H~~~~~~-~~~~l~v 103 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR--HSQVSYVVEGEFHVNV---DG-V--IKVLTAGDSFFVPPHVDHGAVCPT-GGILIDT 103 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS--SEEEEEEEEECEEEEE---TT-E--EEEECTTCEEEECTTCCEEEEESS-CEEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC--cceEEEEEeeEEEEEE---CC-E--EEEeCCCCEEEECcCCceeeEeCC-CcEEEEE
Confidence 377899999999999999997 5799999999999887 33 2 357999999999999999986644 6778877
Q ss_pred EcCCC
Q 018395 302 ITTPN 306 (356)
Q Consensus 302 ~~~~~ 306 (356)
+....
T Consensus 104 ~~p~~ 108 (116)
T 2pfw_A 104 FSPAR 108 (116)
T ss_dssp EESCC
T ss_pred ECCch
Confidence 75543
No 120
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.76 E-value=5.7e-08 Score=80.20 Aligned_cols=74 Identities=16% Similarity=0.176 Sum_probs=62.3
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCCCeEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPDGLAWFS 300 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~~~~ 300 (356)
.+.+..+.+.||+...+|||+. ..|+.||++|++.+.+- + + ...|++||++++|+|.+|...+ +++++.++.
T Consensus 56 ~~~~~~~~~~pg~~~~~H~H~~-~~E~~~Vl~G~~~~~i~---~-~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~ 128 (133)
T 1o4t_A 56 ARLFARMKLPPGSSVGLHKHEG-EFEIYYILLGEGVFHDN---G-K--DVPIKAGDVCFTDSGESHSIENTGNTDLEFLA 128 (133)
T ss_dssp EEEEEEEEECTTCEEEEEECCS-EEEEEEEEESEEEEEET---T-E--EEEEETTEEEEECTTCEEEEECCSSSCEEEEE
T ss_pred eEEEEEEEECCCCccCceECCC-ccEEEEEEeCEEEEEEC---C-E--EEEeCCCcEEEECCCCcEEeEECCCCCEEEEE
Confidence 3567889999999999999986 78999999999998763 2 2 3579999999999999999854 677888887
Q ss_pred EE
Q 018395 301 II 302 (356)
Q Consensus 301 ~~ 302 (356)
+.
T Consensus 129 v~ 130 (133)
T 1o4t_A 129 VI 130 (133)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 121
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.76 E-value=7.7e-07 Score=80.13 Aligned_cols=168 Identities=13% Similarity=0.038 Sum_probs=113.0
Q ss_pred ceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEee
Q 018395 36 NIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGD 115 (356)
Q Consensus 36 ~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~ 115 (356)
+..+.+++++||+..++|.|...|..|||+|+..- ++ ..+.+||.++.|+|..|.... ++.+.++...
T Consensus 42 g~~~~lvr~~pG~~~p~H~H~g~Ee~~VL~G~f~d-----~~----~~~~~Gd~~~~P~g~~H~p~a--~~gc~~~vk~- 109 (223)
T 3o14_A 42 ARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD-----EH----GDYPAGTYVRNPPTTSHVPGS--AEGCTIFVKL- 109 (223)
T ss_dssp CEEEEEEEECTTEECCCEECTTCEEEEEEEEEEEE-----TT----EEEETTEEEEECTTCEECCEE--SSCEEEEEEE-
T ss_pred ccEEEEEEECCCCCcccccCCCCEEEEEEEeEEEE-----CC----eEECCCeEEEeCCCCccccEe--CCCCEEEEEe-
Confidence 44678899999999999999999999999999752 11 589999999999999998876 3445444322
Q ss_pred CCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCceEEEcCCCCcCCCCCcccCCCceeeccCC
Q 018395 116 TSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKGIVKLDANAKLPEPKKEHRDGMAFNCEEA 195 (356)
Q Consensus 116 ~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~iv~~~~~~~~~~p~~~~~~~~~~~l~~~ 195 (356)
..+. +++ ++ .+ ..+. .. +.
T Consensus 110 -~~~~-~~d--------------------------------------~~-~v--~~~~-~~--W~--------------- 128 (223)
T 3o14_A 110 -WQFD-PAD--------------------------------------RT-QF--SKNM-EA--EL--------------- 128 (223)
T ss_dssp -SCSC-TTC--------------------------------------CB-CE--EEET-TT--TC---------------
T ss_pred -cCCC-CCc--------------------------------------cc-cc--ccch-hc--cc---------------
Confidence 1111 100 00 01 1010 00 00
Q ss_pred CCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecC
Q 018395 196 PLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKA 275 (356)
Q Consensus 196 ~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~ 275 (356)
+. ...|-.+..+.... +-.++.+++.||....+|.| . ..|+ +|++|+.. +.. .++.+
T Consensus 129 -~~--~~~Gv~~~~L~~~~-------~E~v~l~r~~~G~~~~~~~h-g-G~Ei-lVL~G~~~----d~~------~~~~~ 185 (223)
T 3o14_A 129 -GA--PVEGISTSLLHEDE-------RETVTHRKLEPGANLTSEAA-G-GIEV-LVLDGDVT----VND------EVLGR 185 (223)
T ss_dssp -CC--CBTTEEEEEEEECS-------SCEEEEEEECTTCEEEECCS-S-CEEE-EEEEEEEE----ETT------EEECT
T ss_pred -cc--CCCCeEEEEEecCC-------CcEEEEEEECCCCccCCCCC-C-cEEE-EEEEeEEE----ECC------ceECC
Confidence 00 00122223332221 24578899999999999999 7 8897 99999964 322 36899
Q ss_pred CcEEEEcCCcEEEEeeCCCCeEEE
Q 018395 276 GNLFIVPRFYVVSKIADPDGLAWF 299 (356)
Q Consensus 276 Gdv~vvP~g~~h~~~~~~~~~~~~ 299 (356)
|+-+-.|.|..|...++.+++.++
T Consensus 186 GsWlR~P~gs~h~~~ag~~g~~i~ 209 (223)
T 3o14_A 186 NAWLRLPEGEALSATAGARGAKIW 209 (223)
T ss_dssp TEEEEECTTCCEEEEEEEEEEEEE
T ss_pred CeEEEeCCCCccCcEECCCCeEEE
Confidence 999999999999998877776544
No 122
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=98.76 E-value=4.7e-08 Score=78.43 Aligned_cols=73 Identities=16% Similarity=0.191 Sum_probs=61.5
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEE-EecCCcEEEEcCCcEEEEee-CCCCeEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLET-TVKAGNLFIVPRFYVVSKIA-DPDGLAWF 299 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~-~l~~Gdv~vvP~g~~h~~~~-~~~~~~~~ 299 (356)
++.+..+.+.||+...+|||+ ..|+.||++|++++.+-+ +. . .|++||++++|+|.+|...+ ++++++++
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~--~~e~~~Vl~G~~~~~i~~---~~---~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l 97 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSN--SYVHLIIIKGEMTLTLED---QE---PHNYKEGNIVYVPFNVKMLIQNINSDILEFF 97 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECS--SCEEEEEEESEEEEEETT---SC---CEEEETTCEEEECTTCEEEEECCSSSEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCC--CcEEEEEEeCEEEEEECC---EE---EEEeCCCCEEEECCCCcEEeEcCCCCCEEEE
Confidence 567888999999999999995 679999999999998732 23 3 69999999999999999855 56778888
Q ss_pred EEE
Q 018395 300 SII 302 (356)
Q Consensus 300 ~~~ 302 (356)
.+.
T Consensus 98 ~i~ 100 (117)
T 2b8m_A 98 VVK 100 (117)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 123
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.75 E-value=2.6e-07 Score=81.11 Aligned_cols=157 Identities=9% Similarity=-0.005 Sum_probs=95.5
Q ss_pred cCcHHHHHhhccCCHHHHHHhhcccC-C---ceEEEcCCCCc-----CCCCCcc--cCCCceeeccCCCCC--cccCCCc
Q 018395 139 GFSTEFVSRAWDLDENTVKTLVGKQT-G---KGIVKLDANAK-----LPEPKKE--HRDGMAFNCEEAPLD--VDIKNGG 205 (356)
Q Consensus 139 ~~~~~vl~~af~~~~~~~~~l~~~q~-~---~~iv~~~~~~~-----~~~p~~~--~~~~~~~~l~~~~~~--~~~~~gG 205 (356)
+++.+-||+..|++...+.++..... . ..+.++.+... +...... ........-...... .....+|
T Consensus 23 g~s~~~la~~~gis~~~ls~~e~g~~~~p~~~~l~~ia~~l~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 102 (198)
T 2bnm_A 23 KMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAHVLGTSIGALTPPAGNDLDDGVIIQMPDERPILKGVRDNVDY 102 (198)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHTTTCTTCBHHHHHHHHHHTTSCTGGGSCCCCCCCBTTBCCCCGGGCCEECCSTTCSTT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHHHHHHHhCCCHHHEEccCCCCcccCceEEeecccccccccccCCCc
Confidence 68889999999999999998876543 2 11222111100 0011000 011111111111110 1123344
Q ss_pred EEEEeCCCCCCCccccCceeEEEEecCCCeec---ccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEc
Q 018395 206 RVVLLNTKNLPLVGEVGCGADLVRLDGKAMCS---PGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVP 282 (356)
Q Consensus 206 ~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~---PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP 282 (356)
.....-. |....-.+.+..+.+.||+... +|||+ ..|+.||++|++.+.+-+..+.+ ...|++||.++||
T Consensus 103 ~~~~~l~---~~~~~~~~~~~~~~~~pg~~~~~~~~h~h~--~~E~~~Vl~G~~~~~~~~~~~~~--~~~l~~GD~~~~~ 175 (198)
T 2bnm_A 103 YVYNCLV---RTKRAPSLVPLVVDVLTDNPDDAKFNSGHA--GNEFLFVLEGEIHMKWGDKENPK--EALLPTGASMFVE 175 (198)
T ss_dssp EEEEECC---CCTTSTTCEEEEEEECCCCGGGCCCCCCCS--SCEEEEEEESCEEEEESCTTSCE--EEEECTTCEEEEC
T ss_pred eEEEeec---cCCCCCcceEEEEEEcCCCCCcccccccCC--CeEEEEEEeeeEEEEECCcCCcc--cEEECCCCEEEeC
Confidence 4444332 2233346889999999999887 58886 57999999999999874311113 3589999999999
Q ss_pred CCcEEEE-ee-CCCCeEEEEEE
Q 018395 283 RFYVVSK-IA-DPDGLAWFSII 302 (356)
Q Consensus 283 ~g~~h~~-~~-~~~~~~~~~~~ 302 (356)
++.+|.. +. ++++++++.+.
T Consensus 176 ~~~~H~~~n~~~~~~~~~l~v~ 197 (198)
T 2bnm_A 176 EHVPHAFTAAKGTGSAKLIAVN 197 (198)
T ss_dssp TTCCEEEEESTTSCCEEEEEEE
T ss_pred CCCceEEEecCCCCCeEEEEEe
Confidence 9999998 44 56788888765
No 124
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.73 E-value=3.8e-08 Score=84.72 Aligned_cols=77 Identities=12% Similarity=0.150 Sum_probs=65.1
Q ss_pred cCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCCCeEEE
Q 018395 221 VGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPDGLAWF 299 (356)
Q Consensus 221 l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~~~ 299 (356)
.++.+..+.+.||+...+|||+. .|+.||++|++++.+- + + ...|++||+++||+|.+|...+ +++++.++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~~--~E~~~Vl~G~~~~~v~---g-~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l 122 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQH--AHGVMILKGRGHAMVG---R-A--VSAVAPYDLVTIPGWSWHQFRAPADEALGFL 122 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS--CEEEEEEEECEEEEET---T-E--EEEECTTCEEEECTTCCEEEECCTTSCEEEE
T ss_pred CeEEEEEEEECCCCccCceeCCC--cEEEEEEeCEEEEEEC---C-E--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 35778899999999999999975 5999999999998762 2 2 3579999999999999999954 67889999
Q ss_pred EEEcCC
Q 018395 300 SIITTP 305 (356)
Q Consensus 300 ~~~~~~ 305 (356)
++....
T Consensus 123 ~i~~~~ 128 (166)
T 3jzv_A 123 CMVNAE 128 (166)
T ss_dssp EEEESS
T ss_pred EEEccC
Confidence 987554
No 125
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.73 E-value=4.6e-08 Score=80.42 Aligned_cols=76 Identities=13% Similarity=0.031 Sum_probs=55.6
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCCCeEEEEEEc
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPDGLAWFSIIT 303 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~~~~~~~ 303 (356)
+.++.+.||+...+|||+. ..|+.||++|++++.+-+ + + ...|++||++++|+|.+|...+ ++ .++++.++.
T Consensus 45 ~~~~~~~~g~~~~~H~H~~-~~E~~~vl~G~~~~~~~~--~-~--~~~l~~Gd~~~ip~g~~H~~~~~~~-~~~~l~~~~ 117 (134)
T 2o8q_A 45 VIRAIPGKEAKPTWHTHTV-GFQLFYVLRGWVEFEYED--I-G--AVMLEAGGSAFQPPGVRHRELRHSD-DLEVLEIVS 117 (134)
T ss_dssp EEEECC-----CCCEEECC-SCEEEEEEESEEEEEETT--T-E--EEEEETTCEEECCTTCCEEEEEECT-TCEEEEEES
T ss_pred EEEEecCCCCCCCCEECCC-CcEEEEEEeCEEEEEECC--c-E--EEEecCCCEEEECCCCcEEeEeCCC-CeEEEEEEC
Confidence 4444455888889999987 799999999999988743 1 3 3579999999999999999966 55 578887775
Q ss_pred CCCC
Q 018395 304 TPNP 307 (356)
Q Consensus 304 ~~~p 307 (356)
....
T Consensus 118 p~~~ 121 (134)
T 2o8q_A 118 PAGF 121 (134)
T ss_dssp STTC
T ss_pred CCch
Confidence 5543
No 126
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.73 E-value=8.6e-08 Score=80.64 Aligned_cols=96 Identities=20% Similarity=0.105 Sum_probs=74.6
Q ss_pred cCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCCCeEEE
Q 018395 221 VGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPDGLAWF 299 (356)
Q Consensus 221 l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~~~ 299 (356)
.++.+.++.+.||+...+|||+. .|+.||++|++++.+-+ +. ...|++||++++|+|.+|...+ +++++.++
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~~--~E~~~Vl~G~~~~~~~~---~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l 118 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHPG--GQILIVTRGKGFYQERG---KP--ARILKKGDVVEIPPNVVHWHGAAPDEELVHI 118 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECTT--CEEEEEEEEEEEEEETT---SC--CEEEETTCEEEECTTCCEEEEEBTTBCEEEE
T ss_pred CcEEEEEEEECCCCccCceECCC--ceEEEEEeCEEEEEECC---EE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 36889999999999999999975 69999999999988633 22 1469999999999999999855 67789998
Q ss_pred EEEcCCCCceeccccccccccCCCHHHHHH
Q 018395 300 SIITTPNPIFTHLAGSIGTWKSLSPSVLEA 329 (356)
Q Consensus 300 ~~~~~~~p~~~~laG~~s~l~~~p~~vl~~ 329 (356)
++...... ....|+..+.++...+
T Consensus 119 ~v~~~~~~------~~~~wl~~v~~e~~~~ 142 (147)
T 2f4p_A 119 GISTQVHL------GPAEWLGSVTEEEYRK 142 (147)
T ss_dssp EEECCGGG------CCCEECCCCCHHHHHH
T ss_pred EEEccCCC------CCceecccCCHHHhhh
Confidence 88754321 1146777777766644
No 127
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.73 E-value=4.9e-08 Score=79.39 Aligned_cols=80 Identities=15% Similarity=0.133 Sum_probs=62.5
Q ss_pred ccCceeEEEEecCCCeec-ccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCCCeE
Q 018395 220 EVGCGADLVRLDGKAMCS-PGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPDGLA 297 (356)
Q Consensus 220 ~l~~s~~~v~l~~g~~~~-PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~ 297 (356)
.-++.+..+.+.||+... +|||+. ..++.||++|++.+.+- + + ...|++||++++|+|.+|...+ +++++.
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~-~e~~~~vl~G~~~~~i~---~-~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~ 95 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQ-NEEIYGILSGKGFITID---G-E--KIELQAGDWLRIAPDGKRQISAASDSPIG 95 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESS-EEEEEEEEEEEEEEEET---T-E--EEEEETTEEEEECTTCCEEEEEBTTBCEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCC-ceEEEEEEeCEEEEEEC---C-E--EEEeCCCCEEEECCCCcEEEEcCCCCCEE
Confidence 346788899999999887 899975 44455599999998863 2 2 3579999999999999999855 567888
Q ss_pred EEEEEcCCC
Q 018395 298 WFSIITTPN 306 (356)
Q Consensus 298 ~~~~~~~~~ 306 (356)
++.+.....
T Consensus 96 ~~~i~~~~~ 104 (125)
T 3cew_A 96 FLCIQVKAG 104 (125)
T ss_dssp EEEEEEETT
T ss_pred EEEEEcCCc
Confidence 887754443
No 128
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.72 E-value=1.2e-07 Score=83.12 Aligned_cols=79 Identities=23% Similarity=0.268 Sum_probs=63.7
Q ss_pred EEEEEEecCCC----------cccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCc
Q 018395 38 GAAKLALEKNG----------FALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTE 107 (356)
Q Consensus 38 ~~~~~~l~Pg~----------~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~ 107 (356)
....+.+.|+. ...+|+|..+|+.||++|+|.+.+-+.+++.....+++||+++||+|..|+..+..+..
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~~ 154 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNY 154 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTCC
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCCC
Confidence 55677888876 24789997799999999999999865433333469999999999999999999877777
Q ss_pred EEEEEEeeC
Q 018395 108 LVVLFLGDT 116 (356)
Q Consensus 108 l~~l~i~~~ 116 (356)
+..+.++..
T Consensus 155 ~~airlF~~ 163 (191)
T 1vr3_A 155 VKAMRLFVG 163 (191)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEECC
Confidence 888877764
No 129
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.67 E-value=6.6e-08 Score=75.14 Aligned_cols=68 Identities=19% Similarity=0.231 Sum_probs=52.5
Q ss_pred eEEEEEEecCCCcccCeeeCC-CEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 37 IGAAKLALEKNGFALPHYCDS-ARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 37 ~~~~~~~l~Pg~~~~pH~h~a-~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
..+....+. +...+|+|.. .|++||++|++.+.+ ++ ..+.+++||++++|+|..|.+.|.+ +..++.+
T Consensus 31 ~~~~~~~~~--~~~~~H~H~~~~e~~~v~~G~~~~~~---~~--~~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~i 99 (102)
T 3d82_A 31 YQFKLVKVE--GEFVWHEHADTDEVFIVMEGTLQIAF---RD--QNITLQAGEMYVIPKGVEHKPMAKE--ECKIMII 99 (102)
T ss_dssp EEEEEEEEE--EECCCBCCTTCCEEEEEEESEEEEEC---SS--CEEEEETTEEEEECTTCCBEEEEEE--EEEEEEE
T ss_pred CEEEEEEEC--CCCCceeCCCCcEEEEEEeCEEEEEE---CC--EEEEEcCCCEEEECCCCeEeeEcCC--CCEEEEE
Confidence 344444443 3578999954 999999999999875 22 3489999999999999999999974 4556554
No 130
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.67 E-value=2e-08 Score=79.30 Aligned_cols=67 Identities=22% Similarity=0.242 Sum_probs=52.2
Q ss_pred eEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEE
Q 018395 37 IGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELV 109 (356)
Q Consensus 37 ~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~ 109 (356)
+.+....++||... .| |...|++||++|++++.+ + ++ ..+.|++||++++|+|.+|.+.|.++.+..
T Consensus 31 ~~~~~~~~~pg~~~-~h-H~~~E~~~Vl~G~~~~~i-~-~g--~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~ 97 (101)
T 1o5u_A 31 EKWPIWEKEVSEFD-WY-YDTNETCYILEGKVEVTT-E-DG--KKYVIEKGDLVTFPKGLRCRWKVLEPVRKH 97 (101)
T ss_dssp GGSCEEEECSEEEE-EE-CSSCEEEEEEEEEEEEEE-T-TC--CEEEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred eEEEEEEeCCCccc-cc-CCceEEEEEEeCEEEEEE-C-CC--CEEEECCCCEEEECCCCcEEEEeCCCeeEE
Confidence 34457788898742 33 589999999999999986 1 13 348999999999999999999997665433
No 131
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=98.67 E-value=1.6e-07 Score=75.38 Aligned_cols=63 Identities=10% Similarity=-0.016 Sum_probs=55.2
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeC
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIAD 292 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~ 292 (356)
++.+.++.+.||+-..+|||+. .|+.||++|++++.+- ++ ...|++||.+++|+|.+|...+.
T Consensus 35 ~~~v~~~~l~~G~~~~~H~H~~--~e~~~Vl~G~~~~~i~---~~---~~~l~~Gd~i~ip~~~~H~~~~~ 97 (114)
T 3fjs_A 35 RLEVMRMVLPAGKQVGSHSVAG--PSTIQCLEGEVEIGVD---GA---QRRLHQGDLLYLGAGAAHDVNAI 97 (114)
T ss_dssp TEEEEEEEECTTCEEEEECCSS--CEEEEEEESCEEEEET---TE---EEEECTTEEEEECTTCCEEEEES
T ss_pred CEEEEEEEECCCCccCceeCCC--cEEEEEEECEEEEEEC---CE---EEEECCCCEEEECCCCcEEEEeC
Confidence 5789999999999999999985 5999999999999863 22 35799999999999999999664
No 132
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=98.65 E-value=2.5e-07 Score=73.66 Aligned_cols=72 Identities=17% Similarity=0.152 Sum_probs=59.5
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
++.+..+.+.||+...+|||+ ..|+.||++|++.+.+ ++ + ...|++||++++|+|.+|...+.. +++++.+
T Consensus 39 ~~~~~~~~~~~g~~~~~H~H~--~~e~~~vl~G~~~~~~---~~-~--~~~l~~Gd~~~ip~~~~H~~~~~~-~~~~~~v 109 (115)
T 1yhf_A 39 DLGITVFSLDKGQEIGRHSSP--GDAMVTILSGLAEITI---DQ-E--TYRVAEGQTIVMPAGIPHALYAVE-AFQMLLV 109 (115)
T ss_dssp TEEEEEEEECTTCEEEEECCS--SEEEEEEEESEEEEEE---TT-E--EEEEETTCEEEECTTSCEEEEESS-CEEEEEE
T ss_pred ceEEEEEEECCCCccCCEECC--CcEEEEEEeCEEEEEE---CC-E--EEEECCCCEEEECCCCCEEEEECC-CceEEEE
Confidence 577889999999999999997 4799999999999876 22 2 257999999999999999986643 5666665
Q ss_pred E
Q 018395 302 I 302 (356)
Q Consensus 302 ~ 302 (356)
.
T Consensus 110 ~ 110 (115)
T 1yhf_A 110 V 110 (115)
T ss_dssp E
T ss_pred E
Confidence 4
No 133
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=98.65 E-value=7.2e-08 Score=78.72 Aligned_cols=74 Identities=9% Similarity=0.060 Sum_probs=62.7
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCCCeEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPDGLAWFS 300 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~~~~ 300 (356)
++.+..+.+.||+...+|||+ ..|+.||++|++++.+- ++. ..|++||++++|+|.+|...+ +++++.++.
T Consensus 47 ~~~~~~~~~~pg~~~~~H~H~--~~e~~~Vl~G~~~~~i~---~~~---~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~ 118 (126)
T 1vj2_A 47 NFVMRLFTVEPGGLIDRHSHP--WEHEIFVLKGKLTVLKE---QGE---ETVEEGFYIFVEPNEIHGFRNDTDSEVEFLC 118 (126)
T ss_dssp SEEEEEEEEEEEEEEEEECCS--SCEEEEEEESEEEEECS---SCE---EEEETTEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CEEEEEEEECCCCcCCceeCC--CcEEEEEEEeEEEEEEC---CEE---EEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 578999999999999999997 57999999999988763 222 579999999999999999855 677888888
Q ss_pred EEc
Q 018395 301 IIT 303 (356)
Q Consensus 301 ~~~ 303 (356)
+..
T Consensus 119 v~~ 121 (126)
T 1vj2_A 119 LIP 121 (126)
T ss_dssp EEE
T ss_pred EEc
Confidence 764
No 134
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.64 E-value=3.9e-07 Score=77.23 Aligned_cols=100 Identities=6% Similarity=0.081 Sum_probs=73.9
Q ss_pred ceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEe--ceEEEEEEccCC
Q 018395 188 MAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVR--GSGRAQIVGPDG 265 (356)
Q Consensus 188 ~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~--G~~~~~iv~~~g 265 (356)
...++.+.++. ...+|+.+.+-.. -....+++..+.+.. -..+|||.. ..|+.||++ |++++++ +|
T Consensus 18 ~iv~~~ei~~~--~~~~G~srR~l~~----~~~fp~sv~~v~~g~--~~~~H~H~~-~~E~~yVLe~~G~g~v~i---dg 85 (157)
T 4h7l_A 18 QMISLSEIEAV--ACPCGWAQRAFGH----DAGTSVSVHYTQITK--AARTHYHRE-HQEIYVVLDHAAHATIEL---NG 85 (157)
T ss_dssp EEEETTTSCCE--EETTEEEEEESCG----GGCCSCEEEEEEECS--CCCCBBCSS-CEEEEEEEEECTTCEEEE---TT
T ss_pred eEEEhhhCCCc--cCCCCeeeEEeEc----CCCCcEEEEEEeCCC--CccceECCC-CcEEEEEEecCcEEEEEE---CC
Confidence 46677766664 4668887765432 222335566666654 458999998 899999999 9999987 33
Q ss_pred ceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEcCC
Q 018395 266 KRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTP 305 (356)
Q Consensus 266 ~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~~~ 305 (356)
+. ..|++||+++||+|..|.+. + +++++++.+..
T Consensus 86 e~---~~l~~GD~v~IPpg~~H~i~-g--~l~~L~I~~Pp 119 (157)
T 4h7l_A 86 QS---YPLTKLLAISIPPLVRHRIV-G--EATIINIVSPP 119 (157)
T ss_dssp EE---EECCTTEEEEECTTCCEEEE-S--CEEEEEEEESS
T ss_pred EE---EEeCCCCEEEECCCCeEeeE-C--CEEEEEEECCC
Confidence 33 57999999999999999986 2 79999987543
No 135
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.63 E-value=2e-07 Score=89.41 Aligned_cols=89 Identities=16% Similarity=0.216 Sum_probs=70.8
Q ss_pred EEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcC-C---CEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 38 GAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKK-G---DGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 38 ~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~-G---Dv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
.....+++||..+..||| ...|+++|++|++.+.+-++...+ ...++. | |+++||+|+.|.+.|.|+++++++.
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~ 351 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDE-IIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIM 351 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCC-CEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCc-EEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEE
Confidence 345678899999999999 888999999999999876554433 367776 8 9999999999999999988999988
Q ss_pred EeeCCCCCCCCceeEEe
Q 018395 113 LGDTSKGHKAGEFTNFF 129 (356)
Q Consensus 113 i~~~~~~~~pg~~~~f~ 129 (356)
..+.. -+|.+..+|+
T Consensus 352 ~~~~~--y~~~~~d~~~ 366 (369)
T 3st7_A 352 WVNEM--FDPNQPDTYF 366 (369)
T ss_dssp EESSC--CCSSSCCCEE
T ss_pred ecCcc--cCCCCCcccc
Confidence 76532 3444444444
No 136
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.62 E-value=2.3e-07 Score=73.02 Aligned_cols=74 Identities=9% Similarity=-0.008 Sum_probs=59.3
Q ss_pred CceeEEEEecCCCeecccccccCCeeE-EEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQV-TYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFS 300 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei-~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~ 300 (356)
++.+.++.+.||....+|||+. ..|+ .||++|++++.+-+ |+ ...|++||++++|+|.+|...+.. ++.++.
T Consensus 32 ~~~~~~~~~~~g~~~~~H~H~~-~~e~~~~vl~G~~~~~~~~--~~---~~~l~~Gd~~~ip~~~~H~~~~~~-~~~~l~ 104 (110)
T 2q30_A 32 NFKIVSFTFKAGQELPVHSHNI-EGELNIVVLEGEGEFVGDG--DA---VIPAPRGAVLVAPISTPHGVRAVT-DMKVLV 104 (110)
T ss_dssp SCEEEEEEECTTCEEEEECCSS-SCEEEEEEEESCEEEECGG--GC---EEEECTTEEEEEETTSCEEEEESS-SEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCC-CccEEEEEEeCEEEEEeCC--CE---EEEECCCCEEEeCCCCcEEEEEcC-CcEEEE
Confidence 5788999999999999999986 5788 89999999987631 22 257999999999999999986543 356665
Q ss_pred EE
Q 018395 301 II 302 (356)
Q Consensus 301 ~~ 302 (356)
++
T Consensus 105 ~~ 106 (110)
T 2q30_A 105 TI 106 (110)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 137
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.60 E-value=5.2e-08 Score=79.72 Aligned_cols=67 Identities=18% Similarity=0.320 Sum_probs=54.9
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCC
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDT 106 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e 106 (356)
..+.+...+++||... .|+|..+|++|||+|++.+.+ +++ ...+|++||++++|+|..|.+.|.++.
T Consensus 47 g~~~~g~w~~~pG~~~-~~~~~~~E~~~Vl~G~~~l~~--~~g--~~~~l~~GD~~~ip~g~~h~~~~~~~~ 113 (123)
T 3bcw_A 47 GKVESGVWESTSGSFQ-SNTTGYIEYCHIIEGEARLVD--PDG--TVHAVKAGDAFIMPEGYTGRWEVDRHV 113 (123)
T ss_dssp TTEEEEEEEEEEEEEE-CCCTTEEEEEEEEEEEEEEEC--TTC--CEEEEETTCEEEECTTCCCEEEEEEEE
T ss_pred CCEEEEEEEECCCcee-eEcCCCcEEEEEEEEEEEEEE--CCC--eEEEECCCCEEEECCCCeEEEEECCce
Confidence 4688999999999765 466544899999999999974 233 237999999999999999999997654
No 138
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.57 E-value=1.7e-07 Score=80.96 Aligned_cols=79 Identities=13% Similarity=0.068 Sum_probs=66.8
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEE-eeCCCCeEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSK-IADPDGLAWFS 300 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~-~~~~~~~~~~~ 300 (356)
|..+.+++|.||+-..+|.|. ..|+.||++|++++.+-+ |+. ..|++||.+ ||+|.+|.. |.+++.++++.
T Consensus 78 G~~~~~v~l~PG~~~~~H~H~--~eE~~~VLeGel~l~ld~--ge~---~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~ 149 (172)
T 3es1_A 78 GSVIRVVDMLPGKESPMHRTN--SIDYGIVLEGEIELELDD--GAK---RTVRQGGII-VQRGTNHLWRNTTDKPCRIAF 149 (172)
T ss_dssp SEEEEEEEECTTCBCCCBCCS--EEEEEEEEESCEEEECGG--GCE---EEECTTCEE-EECSCCBEEECCSSSCEEEEE
T ss_pred CeEEEEEEECCCCCCCCeecC--ceEEEEEEeCEEEEEECC--CeE---EEECCCCEE-EeCCCcEEEEeCCCCCEEEEE
Confidence 678899999999999999996 578999999999998642 222 579999999 999999999 45788999999
Q ss_pred EEcCCCCc
Q 018395 301 IITTPNPI 308 (356)
Q Consensus 301 ~~~~~~p~ 308 (356)
+.+...|-
T Consensus 150 V~~P~~p~ 157 (172)
T 3es1_A 150 ILIEAPAY 157 (172)
T ss_dssp EEEECCCC
T ss_pred EEcCCCce
Confidence 98877763
No 139
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.52 E-value=4.6e-07 Score=79.19 Aligned_cols=147 Identities=7% Similarity=0.024 Sum_probs=89.8
Q ss_pred cCcHHHHHhhccCCHHHHHHhhcccCC---ceEEEcCCCCcCCCCC--cccCCC-ceeeccCCCCCcccCCCcEEEEeCC
Q 018395 139 GFSTEFVSRAWDLDENTVKTLVGKQTG---KGIVKLDANAKLPEPK--KEHRDG-MAFNCEEAPLDVDIKNGGRVVLLNT 212 (356)
Q Consensus 139 ~~~~~vl~~af~~~~~~~~~l~~~q~~---~~iv~~~~~~~~~~p~--~~~~~~-~~~~l~~~~~~~~~~~gG~~~~~~~ 212 (356)
+++.+-||+..|++...+.++...+.. ..+.++.+-.. ..+. ...... .. . .. +....+|..+..-
T Consensus 24 gltq~~lA~~~gis~~~is~~e~g~~~p~~~~l~~ia~~l~-v~~~~l~~~~~~~~~---~--~~-~~~~~~g~~~~~l- 95 (192)
T 1y9q_A 24 GLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASGLE-ASFSAFFANDPQLLS---S--ER-SFPDDLNMKIHTL- 95 (192)
T ss_dssp TCCHHHHHHHHSSCHHHHHHHHTTCSCCCHHHHHHHHHHHT-CCSGGGGTTSTHHHH---H--CC-BCTTCTTEEEEEE-
T ss_pred CCCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHHC-cCHHHHcCCCCCCCc---c--ce-EEeCCCCEEEEEe-
Confidence 688899999999999999998765421 11111111000 0000 000000 00 0 00 1122334332221
Q ss_pred CCCCCccccCceeEEEEecCCCeec--ccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEe
Q 018395 213 KNLPLVGEVGCGADLVRLDGKAMCS--PGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKI 290 (356)
Q Consensus 213 ~~~p~l~~l~~s~~~v~l~~g~~~~--PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~ 290 (356)
.|....-.+.+..+.+.||+... +|||. ..|+.||++|++.+.+- + + ...|++||.++||++.+|...
T Consensus 96 --~~~~~~~~~~~~~~~~~pg~~~~~~~H~h~--~~E~~~Vl~G~~~~~~~---~-~--~~~l~~GD~i~i~~~~~H~~~ 165 (192)
T 1y9q_A 96 --FPYAADTGLEIFEITLLDHHQQMSSPHALG--VIEYIHVLEGIMKVFFD---E-Q--WHELQQGEHIRFFSDQPHGYA 165 (192)
T ss_dssp --EEEETTTTEEEEEEEECTTCEEEECCCSTT--CEEEEEEEESCEEEEET---T-E--EEEECTTCEEEEECSSSEEEE
T ss_pred --ccCCCCCcEEEEEEEECCCCCccCCCCCCC--CEEEEEEEEeEEEEEEC---C-E--EEEeCCCCEEEEcCCCCeEeE
Confidence 12223345788999999999887 55553 58999999999998762 2 3 257999999999999999995
Q ss_pred e-CCCCeEEEEEEcC
Q 018395 291 A-DPDGLAWFSIITT 304 (356)
Q Consensus 291 ~-~~~~~~~~~~~~~ 304 (356)
+ +++++ ++.+...
T Consensus 166 n~~~~~~-~l~v~~~ 179 (192)
T 1y9q_A 166 AVTEKAV-FQNIVAY 179 (192)
T ss_dssp ESSSCEE-EEEEEEC
T ss_pred CCCCCcE-EEEEEec
Confidence 5 67778 7776643
No 140
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.51 E-value=6.4e-08 Score=84.20 Aligned_cols=66 Identities=18% Similarity=0.262 Sum_probs=53.1
Q ss_pred ccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeC
Q 018395 50 ALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDT 116 (356)
Q Consensus 50 ~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~ 116 (356)
..+|+|..+|+.||++|++.+.+. .+++.....+++||+++||+|..|+..+..+..+..+-++.+
T Consensus 93 ~~~H~H~~~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~ 158 (179)
T 1zrr_A 93 LNEHTHGEDEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDN 158 (179)
T ss_dssp HSCBEESSCEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECC
T ss_pred ccceECChheEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccC
Confidence 578999779999999999999875 334433457999999999999999998876666777776653
No 141
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=98.51 E-value=1.7e-07 Score=73.43 Aligned_cols=77 Identities=16% Similarity=0.098 Sum_probs=59.1
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEE-eeCCCCeEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSK-IADPDGLAWFS 300 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~-~~~~~~~~~~~ 300 (356)
.+.+.+++|.||+-...|.|+. ..+++|+++|++++ ...+|.. -...|++||++++|+|..|.. |.|+++++|++
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~-~~~iv~v~~G~~~~--~~~dG~~-~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~ 91 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGM-DYVVVPMADGEMTI--VAPDGTR-SLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCS-CEEEEESSCBC-CE--ECTTSCE-ECCCBCTTCCEEECTTCEEEEEECSSSCEEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCC-CEEEEEEeeEEEEE--EeCCCcE-EEEEECCCCEEEECCCCceeCEECCCCCEEEEE
Confidence 4778999999999998888876 55555556666554 4556642 134799999999999999999 55788999998
Q ss_pred EE
Q 018395 301 II 302 (356)
Q Consensus 301 ~~ 302 (356)
+-
T Consensus 92 vE 93 (98)
T 2ozi_A 92 IE 93 (98)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 142
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.49 E-value=4.7e-07 Score=74.96 Aligned_cols=71 Identities=13% Similarity=0.245 Sum_probs=58.3
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
.+++..+.+.|| ..|||.. ..|+.||++|++++++- |+. ..|++||+++||+|..|...+ .+.++++.+
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~-~~E~~~VLeG~~~l~~~---g~~---~~l~~GD~i~~p~g~~h~~~~-~~~~~~l~v 124 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLN-YDEIDMVLEGELHVRHE---GET---MIAKAGDVMFIPKGSSIEFGT-PTSVRFLYV 124 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECS-SEEEEEEEEEEEEEEET---TEE---EEEETTCEEEECTTCEEEEEE-EEEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCC-CCEEEEEEECEEEEEEC---CEE---EEECCCcEEEECCCCEEEEEe-CCCEEEEEE
Confidence 588999999999 4678887 89999999999998872 433 479999999999999999854 456777776
Q ss_pred Ec
Q 018395 302 IT 303 (356)
Q Consensus 302 ~~ 303 (356)
..
T Consensus 125 ~~ 126 (133)
T 2pyt_A 125 AW 126 (133)
T ss_dssp EE
T ss_pred Ec
Confidence 54
No 143
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.48 E-value=6.9e-07 Score=76.62 Aligned_cols=72 Identities=13% Similarity=0.156 Sum_probs=60.5
Q ss_pred ceeEEEEecC-CCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEE-eeCCCCeEEEE
Q 018395 223 CGADLVRLDG-KAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSK-IADPDGLAWFS 300 (356)
Q Consensus 223 ~s~~~v~l~~-g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~-~~~~~~~~~~~ 300 (356)
+....+.|.| |+-..||.|.. +.|+.||++|++.+++-+ + ...|++||.++||+|..|.+ |.+++.++++.
T Consensus 88 ~~~~~v~lpP~G~~~~~~~~h~-gEE~~yVLeG~v~vtl~g----~--~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~ 160 (166)
T 2vpv_A 88 FASGILKLPAISGQKKLSNSFR-TYITFHVIQGIVEVTVCK----N--KFLSVKGSTFQIPAFNEYAIANRGNDEAKMFF 160 (166)
T ss_dssp CEEEEEEECSSGGGCEEEECCS-EEEEEEEEESEEEEEETT----E--EEEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred ceeEEEEECCCCCCCCCccCCC-ceEEEEEEEeEEEEEECC----E--EEEEcCCCEEEECCCCCEEEEECCCCCEEEEE
Confidence 6677899999 88888887777 999999999999999833 3 24799999999999999999 55777777775
Q ss_pred E
Q 018395 301 I 301 (356)
Q Consensus 301 ~ 301 (356)
+
T Consensus 161 V 161 (166)
T 2vpv_A 161 V 161 (166)
T ss_dssp E
T ss_pred E
Confidence 4
No 144
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.48 E-value=2e-05 Score=72.08 Aligned_cols=63 Identities=22% Similarity=0.179 Sum_probs=52.4
Q ss_pred EEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCC
Q 018395 42 LALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDT 106 (356)
Q Consensus 42 ~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e 106 (356)
..=.||.....| | ..+|++|+++|...+.+.+. ++-+...|++||++++|+|++|.-+...+.
T Consensus 36 ~vgGpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~-g~~~~V~i~eGemfllP~gv~HsP~r~~et 99 (286)
T 2qnk_A 36 FIGGPNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQ-GKHRDVVIRQGEIFLLPARVPHSPQRFANT 99 (286)
T ss_dssp EECSCBCCCCEE-ECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTEEEEECTTCCEEEEECTTC
T ss_pred EEeCCCcCccCc-CCCCCeEEEEEeCeEEEEEEeC-CceeeEEECCCeEEEeCCCCCcCCcccCCe
Confidence 344567778888 6 99999999999999999874 445678999999999999999999885543
No 145
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.47 E-value=1.2e-06 Score=74.81 Aligned_cols=73 Identities=11% Similarity=-0.014 Sum_probs=62.2
Q ss_pred ceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEec--CCCcEEEEEE
Q 018395 36 NIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNK--EDTELVVLFL 113 (356)
Q Consensus 36 ~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~--g~e~l~~l~i 113 (356)
+..+.+++++||+..++|.|...|..|||+|+... +.++ ..+++||.++.|+|..|...+. +++++.++.+
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~---~e~~----~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~~ 113 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRY---KEHD----WVAHAGSVVYETASTRHTPQSAYAEGPDIITFNI 113 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEESSCEEEEEEESCEEE---TTSS----CCBCTTCEEEECSSEEECEEESSSSSSCEEEEEE
T ss_pred CeEEEEEEECCCCCcccccCCCCEEEEEEEeEEEE---eCCC----eEECCCeEEEECCCCcceeEeCCCCCCCEEEEEE
Confidence 57788999999999999999889999999999875 2222 4799999999999999999998 7788887775
Q ss_pred ee
Q 018395 114 GD 115 (356)
Q Consensus 114 ~~ 115 (356)
.+
T Consensus 114 ~~ 115 (159)
T 3ebr_A 114 VA 115 (159)
T ss_dssp EE
T ss_pred ec
Confidence 44
No 146
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=98.47 E-value=6.8e-07 Score=71.21 Aligned_cols=72 Identities=10% Similarity=0.121 Sum_probs=58.1
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
++.+..+.+.+|.-..+|||+ ..|+.||++|++.+.+- + + ...|++||.+++|+|.+|...+. +++.++.+
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~--~~e~~~vl~G~~~~~i~---~-~--~~~l~~Gd~i~i~~~~~H~~~~~-~~~~~~~i 107 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYF--GDTLYLILQGEAVITFD---D-Q--KIDLVPEDVLMVPAHKIHAIAGK-GRFKMLQI 107 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCS--SCEEEEEEEEEEEEEET---T-E--EEEECTTCEEEECTTCCBEEEEE-EEEEEEEE
T ss_pred CceEEEEEECCCCccccEECC--CCeEEEEEeCEEEEEEC---C-E--EEEecCCCEEEECCCCcEEEEeC-CCcEEEEE
Confidence 356777888999989999997 57999999999998872 2 2 35799999999999999998654 46666665
Q ss_pred E
Q 018395 302 I 302 (356)
Q Consensus 302 ~ 302 (356)
.
T Consensus 108 ~ 108 (114)
T 2ozj_A 108 T 108 (114)
T ss_dssp E
T ss_pred E
Confidence 4
No 147
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.46 E-value=9.3e-07 Score=85.02 Aligned_cols=86 Identities=15% Similarity=0.131 Sum_probs=69.4
Q ss_pred EEEeCCCC-CCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEE
Q 018395 21 YHAWCPNE-LPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTW 99 (356)
Q Consensus 21 i~~~~~~~-~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~ 99 (356)
++..++.+ -+.+ ..|++....|.||....+|-|.++++++|++|+|.+.+ ++ +.+++++||+|++|++..|.
T Consensus 264 ~~y~NP~tg~~~~--pti~~~~~~L~pG~~t~~hRht~s~Vy~V~eG~G~~~I---~~--~~~~w~~gD~fvvP~w~~h~ 336 (368)
T 3nw4_A 264 IRYVNPTTGGDVM--PTLRCEFHRLRAGTETATRNEVGSTVFQVFEGAGAVVM---NG--ETTKLEKGDMFVVPSWVPWS 336 (368)
T ss_dssp EECBCTTTSSBSS--SSCEEEEEEECTTCBCCCEEESSCEEEEEEESCEEEEE---TT--EEEEECTTCEEEECTTCCEE
T ss_pred EEEeCCCCCCCcc--hhHHhheEEECCCCccCCeeccccEEEEEEeCcEEEEE---CC--EEEEecCCCEEEECCCCcEE
Confidence 45555432 1223 46788999999999999999988899999999999987 33 45899999999999999999
Q ss_pred EEecCCCcEEEEEEee
Q 018395 100 WYNKEDTELVVLFLGD 115 (356)
Q Consensus 100 ~~N~g~e~l~~l~i~~ 115 (356)
..|. +++.++++.|
T Consensus 337 ~~n~--~~a~Lf~~~D 350 (368)
T 3nw4_A 337 LQAE--TQFDLFRFSD 350 (368)
T ss_dssp EEES--SSEEEEEEES
T ss_pred EEeC--CCEEEEEEeC
Confidence 9997 4677776644
No 148
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.41 E-value=3.6e-06 Score=71.05 Aligned_cols=87 Identities=14% Similarity=0.218 Sum_probs=64.0
Q ss_pred CcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcC
Q 018395 204 GGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPR 283 (356)
Q Consensus 204 gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~ 283 (356)
+.++..+-..+-.. .+++..+++. ++ ..|||.. -.|+.||++|++++++ +|+. ..|++||+++||+
T Consensus 51 ~v~i~~l~s~~~~~----~~s~g~~~~e-~~--~~~~~~~-~eE~~yVLeG~~~l~i---~g~~---~~l~~GD~i~iP~ 116 (151)
T 4axo_A 51 VVYTKDLFTLEESP----RLGCGMMEMK-ET--TFDWTLN-YDEIDYVIDGTLDIII---DGRK---VSASSGELIFIPK 116 (151)
T ss_dssp CEEEEECSCTTTCS----SCEEEEEEEE-EE--EEEEECS-SEEEEEEEEEEEEEEE---TTEE---EEEETTCEEEECT
T ss_pred CEEEEEeecCCCCC----cEEEEEEEEc-Cc--cccEeCC-CcEEEEEEEeEEEEEE---CCEE---EEEcCCCEEEECC
Confidence 45555554443211 4778888887 43 3578888 8999999999999996 3433 5799999999999
Q ss_pred CcEEEEeeCCCCeEEEEEEcCC
Q 018395 284 FYVVSKIADPDGLAWFSIITTP 305 (356)
Q Consensus 284 g~~h~~~~~~~~~~~~~~~~~~ 305 (356)
|..|...+. +.++++.+.+..
T Consensus 117 G~~h~~~n~-~~a~~l~V~~P~ 137 (151)
T 4axo_A 117 GSKIQFSVP-DYARFIYVTYPA 137 (151)
T ss_dssp TCEEEEEEE-EEEEEEEEEECS
T ss_pred CCEEEEEeC-CCEEEEEEECCC
Confidence 999998554 678888876543
No 149
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.39 E-value=4.7e-07 Score=71.39 Aligned_cols=70 Identities=14% Similarity=0.101 Sum_probs=52.6
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSII 302 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~ 302 (356)
..++.+.||.. .+|||+. ..|+.||++|++++.+-+ ++ ...|++||++++|+|.+|...+. +++.++.+.
T Consensus 30 ~~~~~~~~g~~-~~H~H~~-~~E~~~Vl~G~~~~~~~~--~~---~~~l~~Gd~~~ip~~~~H~~~~~-~~~~~l~i~ 99 (107)
T 2i45_A 30 QFHLVKLLGDY-GWHTHGY-SDKVLFAVEGDMAVDFAD--GG---SMTIREGEMAVVPKSVSHRPRSE-NGCSLVLIE 99 (107)
T ss_dssp EEEEEEEEEEC-CCBCC---CCEEEEESSSCEEEEETT--SC---EEEECTTEEEEECTTCCEEEEEE-EEEEEEEEE
T ss_pred EEEEEECCCCC-cceeCCC-CCEEEEEEeCEEEEEECC--Cc---EEEECCCCEEEECCCCcEeeEeC-CCeEEEEEE
Confidence 45566778874 5999987 799999999999988643 12 25799999999999999998653 456666554
No 150
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.38 E-value=7.3e-07 Score=69.09 Aligned_cols=60 Identities=15% Similarity=0.208 Sum_probs=47.6
Q ss_pred CeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 234 AMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 234 ~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
+...+|||+. ..|+.||++|++++.+-+ + ...|++||++++|+|.+|...+. +++.++.+
T Consensus 40 ~~~~~H~H~~-~~e~~~v~~G~~~~~~~~---~---~~~l~~Gd~~~ip~~~~H~~~~~-~~~~~l~i 99 (102)
T 3d82_A 40 GEFVWHEHAD-TDEVFIVMEGTLQIAFRD---Q---NITLQAGEMYVIPKGVEHKPMAK-EECKIMII 99 (102)
T ss_dssp EECCCBCCTT-CCEEEEEEESEEEEECSS---C---EEEEETTEEEEECTTCCBEEEEE-EEEEEEEE
T ss_pred CCCCceeCCC-CcEEEEEEeCEEEEEECC---E---EEEEcCCCEEEECCCCeEeeEcC-CCCEEEEE
Confidence 4578999987 799999999999887632 2 35799999999999999998654 34555554
No 151
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.36 E-value=1.1e-06 Score=73.81 Aligned_cols=74 Identities=5% Similarity=-0.287 Sum_probs=56.9
Q ss_pred eEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEE-EEecCCCcEEEEEEee
Q 018395 37 IGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTW-WYNKEDTELVVLFLGD 115 (356)
Q Consensus 37 ~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~-~~N~g~e~l~~l~i~~ 115 (356)
-.+.+++++||+..++|.|...|.+|||+|+.... .+.......+++||.+++|+|..|. ..+. +++.+++++.
T Consensus 44 ~~~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~~---~g~~~~~~~~~~Gd~~~~p~g~~H~p~~~~--e~~~~l~~~~ 118 (145)
T 2o1q_A 44 SWTAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDVR---GGKAAGGDTAIAPGYGYESANARHDKTEFP--VASEFYMSFL 118 (145)
T ss_dssp EEEEEEEECTTEEECCEEESSCEEEEEEEEEEEET---TCGGGTSEEEESSEEEEECTTCEESCCEEE--EEEEEEEEEE
T ss_pred cEEEEEEECCCCCCCccCCCCCEEEEEEEeEEEEc---CCCEecceEeCCCEEEEECcCCccCCeECC--CCeEEEEEEC
Confidence 35788999999999999997778899999999853 1221112689999999999999999 5443 3356666654
No 152
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.36 E-value=2.9e-06 Score=72.47 Aligned_cols=62 Identities=19% Similarity=0.092 Sum_probs=53.5
Q ss_pred EEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecC
Q 018395 42 LALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKE 104 (356)
Q Consensus 42 ~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g 104 (356)
..-.||+....|+|..+|++||++|+..+.+.+. ++.+...|++||++++|+|++|+-+..+
T Consensus 40 ~v~Gpn~r~d~H~h~~dE~FyvlkG~m~i~v~d~-g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 40 VVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVD-GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp EECSCBCCCCEEECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred EEcCCCcCccCcCCCCceEEEEEeeEEEEEEEcC-CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 4556888899998899999999999999998763 3356789999999999999999997765
No 153
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.36 E-value=2.3e-06 Score=82.13 Aligned_cols=81 Identities=15% Similarity=0.083 Sum_probs=61.6
Q ss_pred CceeEEEEecCCCeec---ccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCCCeE
Q 018395 222 GCGADLVRLDGKAMCS---PGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPDGLA 297 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~---PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~~~~ 297 (356)
.+++. ..+.|++-.. +|||++ ..|+.||++|++++.+-+.+|.+ -...|++||.++||+|.+|...| +++. +
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~-~~E~~~Vl~G~~~~~v~~~~g~~-~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~ 122 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQK-HYENFYCNKGSFQLWAQSGNETQ-QTRVLSSGDYGSVPRNVTHTFQIQDPDT-E 122 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSS-CEEEEEEEESEEEEEEEETTSCC-EEEEEETTCEEEECTTEEEEEEECSTTE-E
T ss_pred cEEEE-EEEcCCCCCCCCccccCCC-ceEEEEEEEEEEEEEECCcCCce-EEEEECCCCEEEECCCCcEEEEeCCCCC-E
Confidence 35566 4555655544 899998 89999999999999988745432 24589999999999999999955 5554 7
Q ss_pred EEEEEcCCC
Q 018395 298 WFSIITTPN 306 (356)
Q Consensus 298 ~~~~~~~~~ 306 (356)
++.+++...
T Consensus 123 ~l~v~~p~~ 131 (350)
T 1juh_A 123 MTGVIVPGG 131 (350)
T ss_dssp EEEEEESSC
T ss_pred EEEEEcCcc
Confidence 777765544
No 154
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.30 E-value=2.1e-06 Score=75.64 Aligned_cols=71 Identities=15% Similarity=-0.034 Sum_probs=60.2
Q ss_pred ceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEee
Q 018395 36 NIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGD 115 (356)
Q Consensus 36 ~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~ 115 (356)
+..+..++++||+..+.|.|...|+.||++|+.. +. ...+.+||.+++|+|..|...+.+++.+.++.+.+
T Consensus 124 ~~~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~----de-----~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~~d 194 (195)
T 2q1z_B 124 EAIARLLWIPGGQAVPDHGHRGLELTLVLQGAFR----DE-----TDRFGAGDIEIADQELEHTPVAERGLDCICLAATD 194 (195)
T ss_dssp SSEEEEEEECTTCBCCCCCCSSCEEEEEEESEEE----CS-----SSEEETTCEEEECSSCCCCCEECSSSCEEEEEEEC
T ss_pred CcEEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE----CC-----cEEECCCeEEEeCcCCccCCEeCCCCCEEEEEEec
Confidence 4567899999999999999999999999999854 21 14899999999999999999998777787776653
No 155
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.27 E-value=2.3e-06 Score=73.41 Aligned_cols=74 Identities=12% Similarity=0.091 Sum_probs=60.0
Q ss_pred ceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecC--CCcEEEEEE
Q 018395 36 NIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKE--DTELVVLFL 113 (356)
Q Consensus 36 ~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g--~e~l~~l~i 113 (356)
+..+.+++++||+..++|.|...|..|||+|+.... +. ..+.+++||.++.|+|..|...+.. ++++.++.+
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~~----~~--~~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l~v 115 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHTGTVHMYTISGCWYYT----EY--PGQKQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIFM 115 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEESSCEEEEEEESEEEET----TC--TTSCEETTEEEEECTTCEECEECCTTCSSCEEEEEE
T ss_pred CcEEEEEEECCCCcCCcccCCCCEEEEEEEEEEEEC----CC--ceEEECCCeEEEeCCCCceeeEeCCCCCCCcEEEEE
Confidence 467889999999999999998899999999998762 11 1257899999999999999999864 336766655
Q ss_pred ee
Q 018395 114 GD 115 (356)
Q Consensus 114 ~~ 115 (356)
.+
T Consensus 116 ~~ 117 (165)
T 3cjx_A 116 LS 117 (165)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 156
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.26 E-value=8.3e-06 Score=71.37 Aligned_cols=79 Identities=13% Similarity=0.245 Sum_probs=60.7
Q ss_pred eeEEEEecCCC----------eecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCC
Q 018395 224 GADLVRLDGKA----------MCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADP 293 (356)
Q Consensus 224 s~~~v~l~~g~----------~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~ 293 (356)
+...+.+.++. ....|+|+. .|+.||++|++.+.+-+.++ +.+...+++||+++||+|..|+..++.
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~--~Ei~yVleG~G~f~i~d~~d-~~~~i~v~~GDlIiIPaG~~H~f~~~~ 151 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLD--EEIRYILEGSGYFDVRDKED-KWIRISMEKGDMITLPAGIYHRFTLDE 151 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSS--CEEEEEEEEEEEEEEECTTS-CEEEEEEETTEEEEECTTCCEEEEECT
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECCc--ceEEEEEeceEEEEECCCCC-eEEEEEECCCCEEEECcCCcCCcccCC
Confidence 34555566554 347899985 69999999999999988644 345568999999999999999987754
Q ss_pred -CCeEEEEEEcCC
Q 018395 294 -DGLAWFSIITTP 305 (356)
Q Consensus 294 -~~~~~~~~~~~~ 305 (356)
..+..+.++...
T Consensus 152 ~~~~~airlF~~~ 164 (191)
T 1vr3_A 152 KNYVKAMRLFVGE 164 (191)
T ss_dssp TCCEEEEEEESSS
T ss_pred CCCEEEEEEECCC
Confidence 457778777554
No 157
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.24 E-value=5.9e-06 Score=71.24 Aligned_cols=78 Identities=13% Similarity=0.141 Sum_probs=61.2
Q ss_pred ceEEEEEEecCCCcccCeee-C------CCEEEEEEeCeEEEEEEcCCCce------------------EEEEEcCCCEE
Q 018395 36 NIGAAKLALEKNGFALPHYC-D------SARVAYVLQGSGVAGIVLPEKEE------------------KVVAIKKGDGI 90 (356)
Q Consensus 36 ~~~~~~~~l~Pg~~~~pH~h-~------a~e~~yVl~G~~~~~vv~~~~~~------------------~~~~l~~GDv~ 90 (356)
.+....+.+.||...+.|+| . -.|-++|+.|.+++.+ ++... ....|++||.+
T Consensus 52 ~Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~--~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesv 129 (175)
T 2y0o_A 52 RYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYV--EGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQY 129 (175)
T ss_dssp SEEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEE--SSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEE
T ss_pred CceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEE--CCccccCcceeccCCceeeecCCcEEEECCCCEE
Confidence 48888999999999999999 7 7888889999988866 22211 23599999999
Q ss_pred EeCCCcEEEEEecCCCcEEEEEEeeC
Q 018395 91 ALPFGVVTWWYNKEDTELVVLFLGDT 116 (356)
Q Consensus 91 ~iP~G~~H~~~N~g~e~l~~l~i~~~ 116 (356)
.+|+|..||++|. .+.+.+.-+...
T Consensus 130 tIppg~~H~f~ag-eegvli~EvSt~ 154 (175)
T 2y0o_A 130 TIPPNTKHWFQAG-EEGAVVTEMSST 154 (175)
T ss_dssp EECTTCCEEEEEE-EEEEEEEEEEEC
T ss_pred EECCCCcEEEEeC-CCCEEEEEEeCC
Confidence 9999999999993 344555554443
No 158
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.18 E-value=8.6e-06 Score=72.28 Aligned_cols=92 Identities=8% Similarity=-0.060 Sum_probs=74.0
Q ss_pred CCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEE
Q 018395 202 KNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIV 281 (356)
Q Consensus 202 ~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vv 281 (356)
.+.++...+.+... . ..-.+.+..+.+.||...+.|.|+ +.|+.||++|++++.+-+.. ...+++||++++
T Consensus 113 ~~~a~~elvGP~g~-~-~s~~l~lG~v~l~PG~~yP~HsHp--~EEiy~VLsG~~e~~v~~g~-----~~~l~pGd~v~i 183 (217)
T 4b29_A 113 NRFGWFELAGPSGH-F-LTQSLRVTVGYWGPGLDYGWHEHL--PEELYSVVSGRALFHLRNAP-----DLMLEPGQTRFH 183 (217)
T ss_dssp HHEEEEEEEETTSS-E-ECSSCEEEEEEECSSCEEEEEECS--SEEEEEEEEECEEEEETTSC-----CEEECTTCEEEE
T ss_pred hCceEEEEECCCCC-C-CCCeEEEEEEEECCCCcCCCCCCC--CceEEEEEeCCEEEEECCCC-----EEecCCCCEEEc
Confidence 55777777776543 2 223688999999999999999997 57999999999999886322 247999999999
Q ss_pred cCCcEEEEeeCCCCeEEEEEE
Q 018395 282 PRFYVVSKIADPDGLAWFSII 302 (356)
Q Consensus 282 P~g~~h~~~~~~~~~~~~~~~ 302 (356)
|.|.+|...++++++..+-+.
T Consensus 184 psgv~Ha~rt~dePllalwvW 204 (217)
T 4b29_A 184 PANAPHAMTTLTDPILTLVLW 204 (217)
T ss_dssp CTTCCEEEECCSSCEEEEEEE
T ss_pred CCCCceeEEECCccEEEEEEE
Confidence 999999999888887655554
No 159
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.17 E-value=7.6e-06 Score=69.80 Aligned_cols=65 Identities=22% Similarity=0.082 Sum_probs=53.0
Q ss_pred EEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCC---CceEEEEEcCCCEEEeCCCcEEEEEecCCC
Q 018395 42 LALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPE---KEEKVVAIKKGDGIALPFGVVTWWYNKEDT 106 (356)
Q Consensus 42 ~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~---~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e 106 (356)
+.=.||.....|+|..+|++|+++|+..+.+.+.+ .+.+...|++||++++|+|++|+-+...+.
T Consensus 39 ~vgGPn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~e~ 106 (176)
T 1zvf_A 39 IVGGPNERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRFADT 106 (176)
T ss_dssp EECSSBCCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEECTTC
T ss_pred EEcCCCcCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcccCCc
Confidence 44457788889966999999999999999998743 134568999999999999999999775433
No 160
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.17 E-value=8.9e-06 Score=64.93 Aligned_cols=75 Identities=16% Similarity=0.293 Sum_probs=53.3
Q ss_pred CceeEEEEecCCCeeccc--ccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee-CCC-CeE
Q 018395 222 GCGADLVRLDGKAMCSPG--FSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA-DPD-GLA 297 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH--~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~-~~~-~~~ 297 (356)
+..+.++. .+|....++ +|.. ..|+.||++|++++.+-+. .. ...|++||.++||+|.+|...+ +++ .+.
T Consensus 30 ~~~i~~i~-~~g~~~~~~~~~~~~-~~E~~~Vl~G~~~l~~~~~--~~--~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~ 103 (112)
T 2opk_A 30 GLKIERII-SNGQASPPGFWYDSP-QDEWVMVVSGSAGIECEGD--TA--PRVMRPGDWLHVPAHCRHRVAWTDGGEPTV 103 (112)
T ss_dssp TEEEEEEE-ESSCCCCTTCCBCCS-SEEEEEEEESCEEEEETTC--SS--CEEECTTEEEEECTTCCEEEEEECSSSCEE
T ss_pred CEEEEEEE-eCCccCCCCccccCC-ccEEEEEEeCeEEEEECCE--EE--EEEECCCCEEEECCCCcEEEEeCCCCCCEE
Confidence 45555554 345445552 4445 7899999999999987442 10 1469999999999999999954 554 677
Q ss_pred EEEEE
Q 018395 298 WFSII 302 (356)
Q Consensus 298 ~~~~~ 302 (356)
|++++
T Consensus 104 ~l~v~ 108 (112)
T 2opk_A 104 WLAVH 108 (112)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88776
No 161
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.16 E-value=1.1e-05 Score=67.57 Aligned_cols=75 Identities=17% Similarity=0.245 Sum_probs=58.3
Q ss_pred eEEEEEEecCCCcc-----cCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCC-CcEEE
Q 018395 37 IGAAKLALEKNGFA-----LPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKED-TELVV 110 (356)
Q Consensus 37 ~~~~~~~l~Pg~~~-----~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~-e~l~~ 110 (356)
+.++.-...|+... .||.|+.-++.||++|++.+.+ ++ +.+.+++||++++|+|.+|...+.++ ++.+.
T Consensus 13 ~~~G~~~~~~~~~~~~~~~~p~~h~~~~i~~v~~G~~~~~i---~~--~~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~ 87 (164)
T 2arc_A 13 LVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKN---QG--REFVCRPGDILLFPPGEIHHYGRHPEAREWYH 87 (164)
T ss_dssp CEEEEEEEETTSTTCSCEEETTCCSSEEEEEEEEECEEEEE---TT--EEEEECTTCEEEECTTCCEEEEECTTSSEEEE
T ss_pred hhhcceeeccCCchhhhhccccCCCceEEEEEEEeEEEEEE---CC--EEEEecCCeEEEEcCCCCEEEEeCCCCCcEEE
Confidence 34455566665432 5888989999999999999987 33 45899999999999999999988763 66777
Q ss_pred EEEeeC
Q 018395 111 LFLGDT 116 (356)
Q Consensus 111 l~i~~~ 116 (356)
+++..+
T Consensus 88 ~~i~f~ 93 (164)
T 2arc_A 88 QWVYFR 93 (164)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 776554
No 162
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.11 E-value=2.9e-05 Score=66.86 Aligned_cols=82 Identities=16% Similarity=0.179 Sum_probs=68.1
Q ss_pred CceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCC-Cc---eEEEEEcCCCEEEeCCCcEEEEEecCCCcEE
Q 018395 35 GNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPE-KE---EKVVAIKKGDGIALPFGVVTWWYNKEDTELV 109 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~-~~---~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~ 109 (356)
.++.+..+...||...++|=| .+..+++|++|+.+..+.... +. .....+.+||++++|++.+|.+.|.++++++
T Consensus 67 ~~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aV 146 (171)
T 3eqe_A 67 NELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMV 146 (171)
T ss_dssp SSCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEE
T ss_pred CCeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEE
Confidence 367889999999999999999 678999999999998876432 21 1347899999999999999999999998877
Q ss_pred EEEEeeC
Q 018395 110 VLFLGDT 116 (356)
Q Consensus 110 ~l~i~~~ 116 (356)
-|-+..+
T Consensus 147 SlHvY~p 153 (171)
T 3eqe_A 147 SLHVYSP 153 (171)
T ss_dssp EEEEEES
T ss_pred EEEEeCC
Confidence 7766553
No 163
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.11 E-value=1.7e-05 Score=65.41 Aligned_cols=78 Identities=12% Similarity=0.132 Sum_probs=57.4
Q ss_pred ceEEEEEEecCC----CcccCeee-CCCEEEEEEeCeEEEEEEcCCC---ceEEEEEcCCCEEEeCCCcEEEEEecCCCc
Q 018395 36 NIGAAKLALEKN----GFALPHYC-DSARVAYVLQGSGVAGIVLPEK---EEKVVAIKKGDGIALPFGVVTWWYNKEDTE 107 (356)
Q Consensus 36 ~~~~~~~~l~Pg----~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~---~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~ 107 (356)
+-.++.....|. .+...|.| +.+|+++|++|++++.+-+... ......|++|++++||+|+.|.-....+
T Consensus 24 ~W~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e-- 101 (140)
T 3d0j_A 24 KWLVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKD-- 101 (140)
T ss_dssp SEEEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTT--
T ss_pred CEEEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCc--
Confidence 345555555553 57788999 8999999999999998853210 1235799999999999999999887543
Q ss_pred EEEEEEee
Q 018395 108 LVVLFLGD 115 (356)
Q Consensus 108 l~~l~i~~ 115 (356)
++++.|-.
T Consensus 102 ~~vLLiEp 109 (140)
T 3d0j_A 102 TKMMYVQD 109 (140)
T ss_dssp CEEEEEEE
T ss_pred eEEEEEEe
Confidence 56665543
No 164
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.06 E-value=1.4e-05 Score=65.81 Aligned_cols=71 Identities=10% Similarity=0.062 Sum_probs=55.8
Q ss_pred cCCCeecccccccCCeeEEEEEeceEEEEEEccC--CceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEEc
Q 018395 231 DGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPD--GKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSIIT 303 (356)
Q Consensus 231 ~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~--g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~~ 303 (356)
..+++...|-|.+ .+|+.+|++|++++.+-+.. +..--.-.|++|++++||+|..|.-.+ .+.++++.+-.
T Consensus 37 ~~~~i~~~h~H~~-tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a-~~e~~vLLiEp 109 (140)
T 3d0j_A 37 DIEGIAHLEIHHS-TDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSIT-QKDTKMMYVQD 109 (140)
T ss_dssp BTTTCCEEEEESS-CCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEE-CTTCEEEEEEE
T ss_pred CcccCHhhccCCC-CCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccC-CCceEEEEEEe
Confidence 4568899999999 99999999999999999631 111113489999999999999999887 44566666643
No 165
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.06 E-value=2.7e-05 Score=74.40 Aligned_cols=76 Identities=11% Similarity=0.094 Sum_probs=62.1
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCC---cEEEEcCCcEEEEee-CCCCeEEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAG---NLFIVPRFYVVSKIA-DPDGLAWFS 300 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~G---dv~vvP~g~~h~~~~-~~~~~~~~~ 300 (356)
.....+.||.++..|||.+ -.|+.+|++|++++.+-++...+.+...+. | ++++||.|++|.+.+ |+++++++.
T Consensus 274 ~~ls~~~~g~~rg~h~h~~-~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ip~g~~h~~~n~~~~~~~~~~ 351 (369)
T 3st7_A 274 VSVNISKPGITKGNHWHHT-KNEKFLVVSGKGVIRFRHVNDDEIIEYYVS-GDKLEVVDIPVGYTHNIENLGDTDMVTIM 351 (369)
T ss_dssp EEEEEECTTCEEEEEECSS-CCEEEEEEESEEEEEEEETTCCCCEEEEEE-TTBCCEEEECTTEEEEEEECSSSCEEEEE
T ss_pred EEEEEecCCceeccccccC-cceEEEEEeeeEEEEEEcCCCCcEEEEEec-CCcceEEEeCCCceEEeEEcCCCcEEEEE
Confidence 4556789999999999998 899999999999999987765554443331 6 999999999999955 778888877
Q ss_pred EE
Q 018395 301 II 302 (356)
Q Consensus 301 ~~ 302 (356)
.-
T Consensus 352 ~~ 353 (369)
T 3st7_A 352 WV 353 (369)
T ss_dssp EE
T ss_pred ec
Confidence 64
No 166
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=98.06 E-value=3.9e-05 Score=65.64 Aligned_cols=130 Identities=18% Similarity=0.186 Sum_probs=85.3
Q ss_pred CCCeEEEEeCCCCC-CCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeE-EEEEEcCCCceEEEE----EcCCCE
Q 018395 16 GNGGSYHAWCPNEL-PMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSG-VAGIVLPEKEEKVVA----IKKGDG 89 (356)
Q Consensus 16 ~~~G~i~~~~~~~~-p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~-~~~vv~~~~~~~~~~----l~~GDv 89 (356)
.+||++++.....- +.-.....+....-|.+|....+|..+++|+.|...|.. ++.++.+++...... +.+|+.
T Consensus 27 PEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~ 106 (170)
T 1yud_A 27 VEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGER 106 (170)
T ss_dssp TTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEE
T ss_pred CCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCce
Confidence 38999976433220 111223467888999999976666669999999999995 888888877644333 678999
Q ss_pred --EEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCC-ceeEEeecccccccccCcHHHHHhhccCCHHHHHHhh
Q 018395 90 --IALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAG-EFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLV 160 (356)
Q Consensus 90 --~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg-~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~ 160 (356)
++||+|+.+...+.+.+-+.+-|... || +|++|-++ +++-|.+-|---++.+++|-
T Consensus 107 pQ~vVP~G~wqaa~~~~g~~~LV~C~Va------PGF~f~dfel~---------~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 107 PQFLVPKGCIFGSAMNQDGFSLVGCMVS------PGFTFDDFELF---------SQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp SCEEECTTCEEEEEESSSSEEEEEEEES------SCCCGGGCCBC---------BHHHHHHSCCTTHHHHTTSC
T ss_pred eEEEECCCCEEEEEECCCCcEEEEEEEC------CCccCCceEEc---------CHHHHHhHCchhHHHHHHhh
Confidence 99999999999987325455555433 44 24444443 45555555555555555543
No 167
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.01 E-value=3.7e-06 Score=73.04 Aligned_cols=67 Identities=15% Similarity=0.187 Sum_probs=52.8
Q ss_pred eecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCC-CeEEEEEEcCC
Q 018395 235 MCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPD-GLAWFSIITTP 305 (356)
Q Consensus 235 ~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~-~~~~~~~~~~~ 305 (356)
...+|+|+. .|+.||++|++...+. .+ .+.+...+++||+++||+|..|+..++.+ .+..+-++...
T Consensus 92 ~~~~H~H~~--~Ei~~Vl~G~g~~~i~-~~-d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~ 159 (179)
T 1zrr_A 92 FLNEHTHGE--DEVRFFVEGAGLFCLH-IG-DEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP 159 (179)
T ss_dssp HHSCBEESS--CEEEEEEESCCCCCEE-CS-SCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG
T ss_pred cccceECCh--heEEEEEcceEEEEEE-eC-CEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC
Confidence 457899985 6999999999999887 23 34455679999999999999999866544 47777777544
No 168
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.00 E-value=1.7e-05 Score=62.23 Aligned_cols=60 Identities=15% Similarity=0.183 Sum_probs=45.9
Q ss_pred ceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee
Q 018395 223 CGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA 291 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~ 291 (356)
.++....+.||... ||-. ..|+.||++|++++.+-+ |+. ..|++||+++||+|.+|...+
T Consensus 31 ~~~~~~~~~pg~~~---~hH~-~~E~~~Vl~G~~~~~i~~--g~~---~~l~~GD~i~ip~g~~H~~~n 90 (101)
T 1o5u_A 31 EKWPIWEKEVSEFD---WYYD-TNETCYILEGKVEVTTED--GKK---YVIEKGDLVTFPKGLRCRWKV 90 (101)
T ss_dssp GGSCEEEECSEEEE---EECS-SCEEEEEEEEEEEEEETT--CCE---EEEETTCEEEECTTCEEEEEE
T ss_pred eEEEEEEeCCCccc---ccCC-ceEEEEEEeCEEEEEECC--CCE---EEECCCCEEEECCCCcEEEEe
Confidence 34456778888642 4434 789999999999998731 333 579999999999999999855
No 169
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=97.92 E-value=2.2e-05 Score=63.97 Aligned_cols=63 Identities=22% Similarity=0.260 Sum_probs=49.3
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeC
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIAD 292 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~ 292 (356)
.+++....+.||... -|+|. ..|+.||++|++++.+- +|+. .+|++||+++||+|..|...+.
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~--~~E~~~Vl~G~~~l~~~--~g~~---~~l~~GD~~~ip~g~~h~~~~~ 110 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTG--YIEYCHIIEGEARLVDP--DGTV---HAVKAGDAFIMPEGYTGRWEVD 110 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTT--EEEEEEEEEEEEEEECT--TCCE---EEEETTCEEEECTTCCCEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCC--CcEEEEEEEEEEEEEEC--CCeE---EEECCCCEEEECCCCeEEEEEC
Confidence 377888899998765 35543 27999999999998862 3433 4799999999999999998553
No 170
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=97.91 E-value=1.2e-05 Score=67.33 Aligned_cols=77 Identities=10% Similarity=0.036 Sum_probs=57.5
Q ss_pred ceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEE
Q 018395 223 CGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSII 302 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~ 302 (356)
-.+..+++.||+...+|+|+. . |..||++|+.+.+ .|...-...+++||.+++|.|..|......+++.++.++
T Consensus 44 ~~~~~~~~~pG~~~p~H~H~~-~-ee~~VL~G~~~~~----~g~~~~~~~~~~Gd~~~~p~g~~H~p~~~~e~~~~l~~~ 117 (145)
T 2o1q_A 44 SWTAIFDCPAGSSFAAHVHVG-P-GEYFLTKGKMDVR----GGKAAGGDTAIAPGYGYESANARHDKTEFPVASEFYMSF 117 (145)
T ss_dssp EEEEEEEECTTEEECCEEESS-C-EEEEEEEEEEEET----TCGGGTSEEEESSEEEEECTTCEESCCEEEEEEEEEEEE
T ss_pred cEEEEEEECCCCCCCccCCCC-C-EEEEEEEeEEEEc----CCCEecceEeCCCEEEEECcCCccCCeECCCCeEEEEEE
Confidence 357889999999999999986 4 5689999999843 332211247899999999999999953334556666666
Q ss_pred cCC
Q 018395 303 TTP 305 (356)
Q Consensus 303 ~~~ 305 (356)
+..
T Consensus 118 ~gp 120 (145)
T 2o1q_A 118 LGP 120 (145)
T ss_dssp ESC
T ss_pred CCc
Confidence 444
No 171
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.89 E-value=0.00039 Score=59.90 Aligned_cols=101 Identities=11% Similarity=-0.106 Sum_probs=71.5
Q ss_pred eeeCCCeEEEEeC-CCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCC------CceEEEEE
Q 018395 13 VYGGNGGSYHAWC-PNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPE------KEEKVVAI 84 (356)
Q Consensus 13 ~~~~~~G~i~~~~-~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~------~~~~~~~l 84 (356)
++.-+.|.+.+.- ..+.+...- .........||.++..|+| ...++++|++|++...+++-. ++.....|
T Consensus 30 ~~~D~RG~f~e~~~~~~~~~~~f--~Q~n~s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~L 107 (174)
T 3ejk_A 30 QIPAEGGPVLHMLRLDSPQFSQF--GEIYFSEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTL 107 (174)
T ss_dssp EECCTTSCEECCCCTTCTTCCCC--CEEEEEEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEE
T ss_pred cEecCCcCEEEEEecCccCCCCe--eEEEEEECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEE
Confidence 4455667766543 333222110 1122334589999999999 899999999999999988743 23356788
Q ss_pred c---CCCEEEeCCCcEEEEEecCCCcEEEEEEee
Q 018395 85 K---KGDGIALPFGVVTWWYNKEDTELVVLFLGD 115 (356)
Q Consensus 85 ~---~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~ 115 (356)
. ....++||+|+.|-+.|.+++++.++...+
T Consensus 108 s~~~n~~~L~IP~G~aHgf~~lsd~~av~ly~~s 141 (174)
T 3ejk_A 108 GRPDNYRLLRIPPQVWYGFAATGDTPALVANCTD 141 (174)
T ss_dssp ETTTBCEEEEECTTCEEEEEECTTSCEEEEEEES
T ss_pred CCccCceEEEeCCCcEEEEEEccCCCEEEEEECC
Confidence 7 678999999999999999886677776654
No 172
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=97.86 E-value=4.6e-05 Score=67.03 Aligned_cols=69 Identities=16% Similarity=0.150 Sum_probs=57.5
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeC-CCCeEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIAD-PDGLAWFS 300 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~-~~~~~~~~ 300 (356)
+..+..+++.||+..++|+|+ ..|+.||++|+.. +.. ..+.+||.+++|.|..|...++ .+++..+.
T Consensus 124 ~~~v~l~~~~pG~~~p~H~H~--g~E~~~VL~G~f~----de~------~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~ 191 (195)
T 2q1z_B 124 EAIARLLWIPGGQAVPDHGHR--GLELTLVLQGAFR----DET------DRFGAGDIEIADQELEHTPVAERGLDCICLA 191 (195)
T ss_dssp SSEEEEEEECTTCBCCCCCCS--SCEEEEEEESEEE----CSS------SEEETTCEEEECSSCCCCCEECSSSCEEEEE
T ss_pred CcEEEEEEECCCCCCCCcCCC--CeEEEEEEEEEEE----CCc------EEECCCeEEEeCcCCccCCEeCCCCCEEEEE
Confidence 356789999999999999996 5699999999844 433 2588999999999999998776 67888777
Q ss_pred EE
Q 018395 301 II 302 (356)
Q Consensus 301 ~~ 302 (356)
+.
T Consensus 192 ~~ 193 (195)
T 2q1z_B 192 AT 193 (195)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 173
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.83 E-value=0.00013 Score=58.58 Aligned_cols=64 Identities=16% Similarity=0.094 Sum_probs=49.0
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEec
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNK 103 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~ 103 (356)
..+.++.-..+||...- +++..+|++|||+|++++.. .++. ..++++||+++||+|+.-.|.-.
T Consensus 40 g~~~~GvWe~tPG~~~~-~~~~~~E~~~iLeG~~~lt~--ddG~--~~~l~aGD~~~~P~G~~gtWev~ 103 (116)
T 3es4_A 40 NGTIVAVWMAEPGIYNY-AGRDLEETFVVVEGEALYSQ--ADAD--PVKIGPGSIVSIAKGVPSRLEIL 103 (116)
T ss_dssp SCCEEEEEEECSEEEEE-CCCSEEEEEEEEECCEEEEE--TTCC--CEEECTTEEEEECTTCCEEEEEC
T ss_pred CCEEEEEEecCCceeEC-eeCCCcEEEEEEEeEEEEEe--CCCe--EEEECCCCEEEECCCCeEEEEEe
Confidence 34677788999997553 33344599999999999974 3343 37999999999999998887653
No 174
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=97.83 E-value=7.5e-05 Score=63.53 Aligned_cols=72 Identities=15% Similarity=0.136 Sum_probs=58.1
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeC---CCCeEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIAD---PDGLAW 298 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~---~~~~~~ 298 (356)
+..+..+++.||+..++|.|+. .|..||++|+.+. +.++ ..+.+||.++.|.|..|...+. ++++.+
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~g--~ee~~VL~G~~~~---~e~~-----~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~ 110 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHTG--TVIVYTVQGSWRY---KEHD-----WVAHAGSVVYETASTRHTPQSAYAEGPDIIT 110 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEESS--CEEEEEEESCEEE---TTSS-----CCBCTTCEEEECSSEEECEEESSSSSSCEEE
T ss_pred CeEEEEEEECCCCCcccccCCC--CEEEEEEEeEEEE---eCCC-----eEECCCeEEEECCCCcceeEeCCCCCCCEEE
Confidence 4668899999999999999985 5889999999764 3333 2589999999999999998654 577877
Q ss_pred EEEEc
Q 018395 299 FSIIT 303 (356)
Q Consensus 299 ~~~~~ 303 (356)
+.+.+
T Consensus 111 ~~~~~ 115 (159)
T 3ebr_A 111 FNIVA 115 (159)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 76543
No 175
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=97.83 E-value=0.00018 Score=63.88 Aligned_cols=81 Identities=10% Similarity=0.037 Sum_probs=66.5
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEc--CCCc----eEEEEEcCCCEEEeCC--CcEEEEEec-CC
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVL--PEKE----EKVVAIKKGDGIALPF--GVVTWWYNK-ED 105 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~--~~~~----~~~~~l~~GDv~~iP~--G~~H~~~N~-g~ 105 (356)
..+.+..+...||...++|-|....+++|++|+.+..+.. +++. .....+.+||++++++ |.+|.+.|. ++
T Consensus 77 ~~~~v~~l~w~PGq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 77 ERFSIVSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SSCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CCEEEEEEEeCCCcccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 3678899999999999999995599999999999988764 2221 1247899999999999 999999998 67
Q ss_pred CcEEEEEEee
Q 018395 106 TELVVLFLGD 115 (356)
Q Consensus 106 e~l~~l~i~~ 115 (356)
++.+.|-+..
T Consensus 157 ~~avsLHvY~ 166 (208)
T 2gm6_A 157 RVSISIHVYG 166 (208)
T ss_dssp SCEEEEEEES
T ss_pred CcEEEEEEEc
Confidence 7777776543
No 176
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=97.72 E-value=0.00021 Score=60.16 Aligned_cols=65 Identities=8% Similarity=-0.163 Sum_probs=53.3
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEe
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYN 102 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N 102 (356)
.+....+++++||+.+++|+|...|.+|||+|+....- +.......+++|+.++-|+|..|+..-
T Consensus 44 ~g~~t~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~~---Gd~~~~~~~~aGsYv~ePpGs~H~p~~ 108 (153)
T 3bal_A 44 TSSWTAIFNCPAGSSFASHIHAGPGEYFLTKGKMEVRG---GEQEGGSTAYAPSYGFESSGALHGKTF 108 (153)
T ss_dssp TTEEEEEEEECTTEEECCEEESSCEEEEEEESEEEETT---CGGGTSEEEESSEEEEECTTCEESCCE
T ss_pred cceEEEEEEeCCCCCccCccCCCCEEEEEEEEEEEecC---ccccCccccCCCeEEEcCCCCccccee
Confidence 56788899999999999999998999999999987632 111113678999999999999998544
No 177
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.68 E-value=0.011 Score=53.98 Aligned_cols=181 Identities=13% Similarity=0.045 Sum_probs=111.7
Q ss_pred EEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCC--cEEEEEecC-CCcEEEEEEe
Q 018395 39 AAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFG--VVTWWYNKE-DTELVVLFLG 114 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G--~~H~~~N~g-~e~l~~l~i~ 114 (356)
+...++.||.-+.+|-| +-+.+.||++|+..-. +.-|.. ..+++||+-.+-+| +.|.-.|.. +++++++-+.
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn~--~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlW 141 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSEGNH--VQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLW 141 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETTSCE--EEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCCCCE--EEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEE
Confidence 45678999999999999 5555889999998774 444432 69999999999665 799999964 4678888776
Q ss_pred eCC--CCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCceEEEcCCCCcCCCCCcccCCCceeec
Q 018395 115 DTS--KGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGKGIVKLDANAKLPEPKKEHRDGMAFNC 192 (356)
Q Consensus 115 ~~~--~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~~iv~~~~~~~~~~p~~~~~~~~~~~l 192 (356)
.+. ...+| .|+. + .+| . ..-.+|.... + .
T Consensus 142 i~l~p~~~~P-~yq~---------~-~~p-----------~---------~~~~lIag~~-G----------~------- 172 (256)
T 2vec_A 142 LDACPQRENP-LIQK---------L-ALN-----------M---------GKQQLIASPE-G----------A------- 172 (256)
T ss_dssp EECCTTSCCC-SEEE---------E-ECC-----------C---------SSEEEEEESS-C----------G-------
T ss_pred EeCChhcCCC-CceE---------E-cCC-----------C---------CCEEEEEeCC-C----------C-------
Confidence 542 11222 1111 0 011 0 0001222110 0 0
Q ss_pred cCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEE
Q 018395 193 EEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETT 272 (356)
Q Consensus 193 ~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~ 272 (356)
.|.+. ....+.+..+.|++|+-.......+ .-++||++|++.+. ..++ . ...
T Consensus 173 -----------~~p~~----------~~~~~~~~~~~L~~g~~~~~~~~~~--~~~l~v~~G~v~v~--g~~~-~--~~~ 224 (256)
T 2vec_A 173 -----------MGSLQ----------LRQQVWLHHIVLDKGESANFQLHGP--RAYLQSIHGKFHAL--THHE-E--KAA 224 (256)
T ss_dssp -----------GGCEE----------CSSSCEEEEEEECTTCEEEEECSSS--EEEEEEEESCEEEE--ETTE-E--EEE
T ss_pred -----------CCceE----------ccCCcEEEEEEECCCCEEEEecCCC--eEEEEEEECEEEEC--Cccc-c--ceE
Confidence 01111 0113557778899998876555333 37899999998774 2111 1 246
Q ss_pred ecCCcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 273 VKAGNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 273 l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
|.+||..++-.+-...+.+ .++++++.+
T Consensus 225 l~~gd~~~l~~~~~l~l~a-~~~a~~LL~ 252 (256)
T 2vec_A 225 LTCGDGAFIRDEANITLVA-DSPLRALLI 252 (256)
T ss_dssp ECTTCEEEEESCSEEEEEE-SSSEEEEEE
T ss_pred ECCCCEEEECCCCeEEEEe-CCCCEEEEE
Confidence 9999999997765544445 356666654
No 178
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.68 E-value=0.0011 Score=55.05 Aligned_cols=99 Identities=13% Similarity=-0.022 Sum_probs=67.9
Q ss_pred eeeCCCeEEEEeCC-CCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCC-CE
Q 018395 13 VYGGNGGSYHAWCP-NELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKG-DG 89 (356)
Q Consensus 13 ~~~~~~G~i~~~~~-~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~G-Dv 89 (356)
.+..+.|.+..... .+.|- .-. --......+||..+.+|.| ...++++|++|+..+.+-+ +....+..|.+. ..
T Consensus 12 ~i~D~RG~L~~~e~~~~ipf-~ik-Rvy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldD-g~~~~~~~L~~~~~g 88 (141)
T 2pa7_A 12 KIIDSRGSLVAIEENKNIPF-SIK-RVYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDD-GNIIQEITLDSPAVG 88 (141)
T ss_dssp EEEETTEEEEEEETTTTSSS-CCC-EEEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEEC-SSCEEEEEECCTTEE
T ss_pred cEecCCCcEEEEeccCCCCC-Ccc-EEEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEEC-CcEEEEEEECCCCcE
Confidence 44456788877655 33332 212 2223334569999999999 9999999999999998743 333345677554 45
Q ss_pred EEeCCCcEEEEEecCCCcEEEEEEee
Q 018395 90 IALPFGVVTWWYNKEDTELVVLFLGD 115 (356)
Q Consensus 90 ~~iP~G~~H~~~N~g~e~l~~l~i~~ 115 (356)
++||+|..|.+.+-++. .+++.+.+
T Consensus 89 L~IppgvWh~~~~~s~~-avllvlas 113 (141)
T 2pa7_A 89 LYVGPAVWHEMHDFSSD-CVMMVLAS 113 (141)
T ss_dssp EEECTTCEEEEECCCTT-CEEEEEES
T ss_pred EEeCCCEEEEEEEcCCC-eEEEEECC
Confidence 99999999999998765 55554443
No 179
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=97.66 E-value=0.00052 Score=58.96 Aligned_cols=84 Identities=8% Similarity=0.089 Sum_probs=67.7
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCce---EEEEEecCCcEEEEcCCcEEEE-eeCCCCeE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKR---VLETTVKAGNLFIVPRFYVVSK-IADPDGLA 297 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~---~~~~~l~~Gdv~vvP~g~~h~~-~~~~~~~~ 297 (356)
++++..+...||.-..+|=|.+ ++.+++|++|+.+.++....+.+ .-...+.+||++++|.+.+|.+ |.+++.+.
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~-s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aV 146 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQ-SIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMV 146 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTT-CEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEE
T ss_pred CeEEEEEEECCCCCcccccCCC-ceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEE
Confidence 3668888999999999999998 89999999999999887643321 1235899999999999999999 55777787
Q ss_pred EEEEEcCCC
Q 018395 298 WFSIITTPN 306 (356)
Q Consensus 298 ~~~~~~~~~ 306 (356)
-|-++....
T Consensus 147 SlHvY~pp~ 155 (171)
T 3eqe_A 147 SLHVYSPPL 155 (171)
T ss_dssp EEEEEESCC
T ss_pred EEEEeCCCc
Confidence 777765443
No 180
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=97.63 E-value=0.00019 Score=61.26 Aligned_cols=59 Identities=15% Similarity=0.161 Sum_probs=47.7
Q ss_pred cCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCC
Q 018395 231 DGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADP 293 (356)
Q Consensus 231 ~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~ 293 (356)
.||+-.--|.|+ ..|+.||++|+..+.+.+. |+ .-+..|++||+|++|+|.+|.-.+..
T Consensus 43 Gpn~r~d~H~h~--~dE~FyvlkG~m~i~v~d~-g~-~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 43 GPNHRTDYHDDP--LEEFFYQLRGNAYLNLWVD-GR-RERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp SCBCCCCEEECS--SCEEEEEEESCEEEEEEET-TE-EEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred CCCcCccCcCCC--CceEEEEEeeEEEEEEEcC-Cc-eeeEEECCCCEEEeCCCCCcCccccC
Confidence 566667778774 7899999999999999984 32 23568999999999999999976543
No 181
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=97.59 E-value=0.00033 Score=59.75 Aligned_cols=60 Identities=12% Similarity=0.175 Sum_probs=45.2
Q ss_pred cCCCeecccccccCCeeEEEEEeceEEEEEEccC--CceEEEEEecCCcEEEEcCCcEEEEeeC
Q 018395 231 DGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPD--GKRVLETTVKAGNLFIVPRFYVVSKIAD 292 (356)
Q Consensus 231 ~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~--g~~~~~~~l~~Gdv~vvP~g~~h~~~~~ 292 (356)
.||.-.-=|.| ...|+.|+++|+..+.+.+.. +.+.-+-.|++||+|++|+|.+|.-.+.
T Consensus 42 GPn~r~D~H~~--~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 42 GPNERTDYHIN--PTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp SSBCCSCEEEC--SSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred CCCcCCcCcCC--CCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 44554544543 378999999999999999832 0223356899999999999999997554
No 182
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=97.56 E-value=0.044 Score=49.51 Aligned_cols=206 Identities=14% Similarity=0.060 Sum_probs=121.3
Q ss_pred eeCCCeEEEEeCCCCC-----CCcc--cCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEc
Q 018395 14 YGGNGGSYHAWCPNEL-----PMLR--QGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIK 85 (356)
Q Consensus 14 ~~~~~G~i~~~~~~~~-----p~l~--~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~ 85 (356)
-..++|++.......| |.+. +.-..+..-.+.||.-+.+|-| +-+.+.||++|+..-. +.-|.. ..++
T Consensus 11 g~~~~~~l~~~~~fsf~~~~dP~~~~fg~l~v~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn~--~~i~ 86 (242)
T 1tq5_A 11 GHANHGWLDSWHTFSFANYYDPNFMGFSALRVINDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSMGNK--EQVP 86 (242)
T ss_dssp EEEECSSEEEEESSCBTTBCCSSCSCBTTEEEEEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESSSCE--EEEE
T ss_pred CCccCCCEEEEEecccccccChhHhcCCceEeeccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCCCCc--EEEC
Confidence 4456666665443333 2221 1122345678999988999999 6666999999998774 444432 6999
Q ss_pred CCCEEEeCCC--cEEEEEecC-CCcEEEEEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcc
Q 018395 86 KGDGIALPFG--VVTWWYNKE-DTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGK 162 (356)
Q Consensus 86 ~GDv~~iP~G--~~H~~~N~g-~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~ 162 (356)
+|||-.+-|| +.|.-.|.. +++++++-+..... . .+ ...-|- . + .+|. .
T Consensus 87 ~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlWv~P~-~-k~-~~P~y~----~-~-~~p~-----------~-------- 138 (242)
T 1tq5_A 87 AGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIMPE-E-NG-ITPRYE----Q-R-RFDA-----------V-------- 138 (242)
T ss_dssp TTCEEEEECTTCEEEEEECCCSSCCEEEEEEEECCS-S-CS-CCCEEE----E-E-CCCC-----------C--------
T ss_pred CCcEEEEECCCCcEEEEEcCCCCCeEEEEEEEEcch-h-cC-CCCcce----e-e-cCCc-----------h--------
Confidence 9999999655 899999964 46788887766421 1 11 011110 0 1 0221 0
Q ss_pred cCCceEEEcCCCCcCCCCCcccCCCceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccc
Q 018395 163 QTGKGIVKLDANAKLPEPKKEHRDGMAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSC 242 (356)
Q Consensus 163 q~~~~iv~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~ 242 (356)
.+..+|.... +. .|.+. ....+.+..+.|++|+-...-..+
T Consensus 139 ~~g~~iag~~-g~----------------------------~~p~~----------~~~~~~~~~~~l~~g~~~~~~~~~ 179 (242)
T 1tq5_A 139 QGKQLVLSPD-AR----------------------------DGSLK----------VHQDMELYRWALLKDEQSVHQIAA 179 (242)
T ss_dssp SSEEEEEESS-CG----------------------------GGCEE----------CSSSCEEEEEEECTTCEEEECCCT
T ss_pred hCCEEEEecC-CC----------------------------CCcEe----------ccCCCEEEEEEECCCCEEEeecCC
Confidence 0001232110 00 00111 011355777888998877544434
Q ss_pred cCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEE
Q 018395 243 DSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSII 302 (356)
Q Consensus 243 ~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~ 302 (356)
. -.-++||++|++.+ +| ..|.+||..++..+-...+.+ .++++++.+-
T Consensus 180 ~-~~~~~~v~~G~v~v-----~g-----~~l~~gd~~~~~~~~~l~l~a-~~~a~~Ll~~ 227 (242)
T 1tq5_A 180 E-RRVWIQVVKGNVTI-----NG-----VKASTSDGLAIWDEQAISIHA-DSDSEVLLFD 227 (242)
T ss_dssp T-CEEEEEEEESEEEE-----TT-----EEEETTCEEEEESCSCEEEEE-SSSEEEEEEE
T ss_pred C-cEEEEEEccCcEEE-----CC-----EEeCCCCEEEECCCCeEEEEe-CCCCEEEEEE
Confidence 3 44689999999877 23 258899999998765444445 3566666654
No 183
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=97.54 E-value=0.001 Score=58.57 Aligned_cols=78 Identities=15% Similarity=0.009 Sum_probs=63.7
Q ss_pred ceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcC--CC-----ceEEEEEcCCCEEEe-CCCcEEEEEecC-C
Q 018395 36 NIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLP--EK-----EEKVVAIKKGDGIAL-PFGVVTWWYNKE-D 105 (356)
Q Consensus 36 ~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~--~~-----~~~~~~l~~GDv~~i-P~G~~H~~~N~g-~ 105 (356)
.+++..+...||...++|=| .+..+++|++|+.+..+..- ++ ......+++||+.++ |++..|.+.|.+ +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 57889999999999999999 68999999999999987652 11 123578999999999 888899999988 6
Q ss_pred CcEEEEEE
Q 018395 106 TELVVLFL 113 (356)
Q Consensus 106 e~l~~l~i 113 (356)
++.+-|=+
T Consensus 149 ~~avSlHv 156 (200)
T 3eln_A 149 EPAVSLHL 156 (200)
T ss_dssp CCEEEEEE
T ss_pred CCEEEEEe
Confidence 66544443
No 184
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=97.53 E-value=0.00025 Score=60.64 Aligned_cols=72 Identities=10% Similarity=-0.030 Sum_probs=55.9
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCC--C-CeEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADP--D-GLAW 298 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~--~-~~~~ 298 (356)
+..+..+++.||+..++|+|+. .|..||++|+.+.+ ..+. ..+++||.++.|.|..|...+.. + ++..
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~g--~ee~~VL~G~f~~~---~~~~----~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~ 112 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHTG--TVHMYTISGCWYYT---EYPG----QKQTAGCYLYEPGGSIHQFNTPRDNEGQTEV 112 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEESS--CEEEEEEESEEEET---TCTT----SCEETTEEEEECTTCEECEECCTTCSSCEEE
T ss_pred CcEEEEEEECCCCcCCcccCCC--CEEEEEEEEEEEEC---CCce----EEECCCeEEEeCCCCceeeEeCCCCCCCcEE
Confidence 4568899999999999999985 68999999998763 2211 24789999999999999986632 3 6755
Q ss_pred EEEE
Q 018395 299 FSII 302 (356)
Q Consensus 299 ~~~~ 302 (356)
+.+.
T Consensus 113 l~v~ 116 (165)
T 3cjx_A 113 IFML 116 (165)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 185
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.43 E-value=0.0023 Score=53.14 Aligned_cols=96 Identities=15% Similarity=0.073 Sum_probs=66.4
Q ss_pred CCCcEEEEeCC-CCCCCccccCceeEEE-EecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCC-cE
Q 018395 202 KNGGRVVLLNT-KNLPLVGEVGCGADLV-RLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAG-NL 278 (356)
Q Consensus 202 ~~gG~~~~~~~-~~~p~l~~l~~s~~~v-~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~G-dv 278 (356)
...|.++.+.. ++.|.- . -.++.+ ...||..+.+|.|.. .+++++|++|+..+.+-+....+ ...|.+. ..
T Consensus 15 D~RG~L~~~e~~~~ipf~--i-kRvy~~~~~~~g~~RG~H~Hk~-~~q~li~l~Gs~~v~ldDg~~~~--~~~L~~~~~g 88 (141)
T 2pa7_A 15 DSRGSLVAIEENKNIPFS--I-KRVYYIFDTKGEEPRGFHAHKK-LEQVLVCLNGSCRVILDDGNIIQ--EITLDSPAVG 88 (141)
T ss_dssp ETTEEEEEEETTTTSSSC--C-CEEEEEESCCSSCCEEEEEESS-CCEEEEEEESCEEEEEECSSCEE--EEEECCTTEE
T ss_pred cCCCcEEEEeccCCCCCC--c-cEEEEEEecCCCCEECcCcCCC-ceEEEEEEccEEEEEEECCcEEE--EEEECCCCcE
Confidence 44788887776 444431 1 112323 245899999999999 99999999999999995533222 3345544 45
Q ss_pred EEEcCCcEEEEeeCCCCeEEEEEEc
Q 018395 279 FIVPRFYVVSKIADPDGLAWFSIIT 303 (356)
Q Consensus 279 ~vvP~g~~h~~~~~~~~~~~~~~~~ 303 (356)
+.||+|.+|.+.+-++++.++.+.+
T Consensus 89 L~IppgvWh~~~~~s~~avllvlas 113 (141)
T 2pa7_A 89 LYVGPAVWHEMHDFSSDCVMMVLAS 113 (141)
T ss_dssp EEECTTCEEEEECCCTTCEEEEEES
T ss_pred EEeCCCEEEEEEEcCCCeEEEEECC
Confidence 8999999999977655677776653
No 186
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=97.39 E-value=0.00027 Score=59.53 Aligned_cols=75 Identities=8% Similarity=0.022 Sum_probs=57.0
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
|--..++++.||+.+++|+|+. .|-+||++|+...+ .|...-+..+.+|+.++-|+|..|+....++..+++.+
T Consensus 45 g~~t~lvr~~pG~~~p~H~H~g--~ee~~VL~G~~~~~----~Gd~~~~~~~~aGsYv~ePpGs~H~p~~~~~~~~~~~~ 118 (153)
T 3bal_A 45 SSWTAIFNCPAGSSFASHIHAG--PGEYFLTKGKMEVR----GGEQEGGSTAYAPSYGFESSGALHGKTFFPVESQFYMT 118 (153)
T ss_dssp TEEEEEEEECTTEEECCEEESS--CEEEEEEESEEEET----TCGGGTSEEEESSEEEEECTTCEESCCEESSCEEEEEE
T ss_pred ceEEEEEEeCCCCCccCccCCC--CEEEEEEEEEEEec----CccccCccccCCCeEEEcCCCCcccceeCCCCeEEEEE
Confidence 5668889999999999999995 68899999998664 33210034678999999999999986554555555544
Q ss_pred E
Q 018395 302 I 302 (356)
Q Consensus 302 ~ 302 (356)
.
T Consensus 119 ~ 119 (153)
T 3bal_A 119 F 119 (153)
T ss_dssp E
T ss_pred E
Confidence 4
No 187
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=97.37 E-value=0.018 Score=52.71 Aligned_cols=209 Identities=11% Similarity=0.036 Sum_probs=117.4
Q ss_pred CCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEE--cC--------
Q 018395 17 NGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAI--KK-------- 86 (356)
Q Consensus 17 ~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l--~~-------- 86 (356)
..|.+...++... . ..-+++..++|++|.......-+.+-.++.+.|++++.+ ++. ++.+ .+
T Consensus 12 ~~g~~~~itp~~a-~--~~y~~f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~~---~g~--~~~~~g~R~svF~~~~ 83 (270)
T 2qjv_A 12 ESGNIQHISPQNA-G--WEYVGFDVWQLXAGESITLPSDERERCLVLVAGLASVXA---ADS--FFYRIGQRMSPFERIP 83 (270)
T ss_dssp SSEEEEEECHHHH-T--SSSCEEEEEEECTTCEEEECCSSEEEEEEEEESCEEEEE---TTE--EEEEECCCSSGGGCSC
T ss_pred CCCCEEEeCCCCC-C--cEEeEEEEEEecCCCEEEecCCCcEEEEEEecceEEEEE---CCE--EEeccccccccccCCC
Confidence 5566666664221 1 233778999999999665554455556667899999987 332 3444 23
Q ss_pred CCEEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCCceeEEeecccccccccCcHHHHHhhccCCHHHHHHhhcccCCc
Q 018395 87 GDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAGEFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQTGK 166 (356)
Q Consensus 87 GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~~~ 166 (356)
.|++|+|.|....+...+ +++|......+ .+.+...++ +.+++ .
T Consensus 84 p~~lYvp~g~~v~i~a~~--~~~~~v~sAp~----~~~~p~r~i---------------------~~~d~---------~ 127 (270)
T 2qjv_A 84 AYSVYLPHHTEAXVTAET--DLELAVCSAPG----FGELPVRLI---------------------SPQEV---------G 127 (270)
T ss_dssp CCEEEECSSCCEEEEESS--SEEEEEEEEEC----CSCCCCEEE---------------------CGGGS---------E
T ss_pred CcEEEECCCCEEEEEecC--CceEEEEeeec----CCcCCcEEE---------------------CHHHC---------C
Confidence 599999999977776655 35555443332 112222111 11110 0
Q ss_pred eEEEcCCCCcCCCCCcccCCCceeeccCCCCCcccCCCcEEEEeCCCCCCCccccCceeEEEEecCCCee---ccccccc
Q 018395 167 GIVKLDANAKLPEPKKEHRDGMAFNCEEAPLDVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMC---SPGFSCD 243 (356)
Q Consensus 167 ~iv~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~~~~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~---~PH~h~~ 243 (356)
...+-+. ..++..+++... +.|.- .|-+..+ |+|||.. +||.|.+
T Consensus 128 ~~~rG~g----------~n~R~V~~i~~~------------------~~~a~---~LlvgEv-~tpgG~WSSyPpHkHd~ 175 (270)
T 2qjv_A 128 VEHRGXG----------RNQRLVHNILPD------------------SQLAD---SLLVVEV-YTNAGATSSWPAHXHDT 175 (270)
T ss_dssp EEEESSG----------GGCEEEEEEECT------------------TSCCS---SCEEEEE-EECTTCEESCSCEECEE
T ss_pred eEeccCc----------cchhhhhhhcCC------------------CCCcc---eEEEEEE-EcCCCccccCCCccccc
Confidence 1111110 012234444421 12221 2556666 8899888 9999987
Q ss_pred CC--e------eEEEE-Ee---ceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCC-CeEEEEEEc
Q 018395 244 SA--L------QVTYI-VR---GSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPD-GLAWFSIIT 303 (356)
Q Consensus 244 ~A--~------ei~~v-~~---G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~-~~~~~~~~~ 303 (356)
. . |+-|. +. |-+.=-|.+++|.---...++-||++.+|.|+ |-..+... .+=++-+..
T Consensus 176 -~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy-Hp~~a~pGy~~YylwvMa 246 (270)
T 2qjv_A 176 -AVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY-HPVATIAGYDNYYLNVMA 246 (270)
T ss_dssp -EETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB-CCEEECTTCEEEEEEEEE
T ss_pred -ccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc-CCCcCCCCcccEEEEEEE
Confidence 5 3 88765 33 45544444444421113579999999999999 98755322 222554443
No 188
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.36 E-value=0.0013 Score=59.41 Aligned_cols=64 Identities=9% Similarity=0.157 Sum_probs=51.0
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEec
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNK 103 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~ 103 (356)
..++......+||... +.+++.+|++|||+|++++.. .++. ..++++||+++||+|+.-.|.-.
T Consensus 165 g~~~~GiW~~tpG~~~-~~~~~~~E~~~ILeG~v~lt~--~~G~--~~~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 165 STLRIGVWDSTPYERI-SRPHKIHELMNLIEGRVVLSL--ENGS--SLTVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp SSCEEEEEEECCEEBC-CEECSSCEEEEEEECCEEEEE--TTSC--EEEECTTCEEEECTTCEEEEEES
T ss_pred CCEEEeEEEeCCCEEE-CCcCCCCEEEEEEEeEEEEEe--CCCC--EEEECCCCEEEECCCCEEEEEEC
Confidence 4678899999999833 333478899999999999863 3443 37999999999999998877654
No 189
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.35 E-value=0.0042 Score=53.37 Aligned_cols=72 Identities=13% Similarity=-0.043 Sum_probs=57.8
Q ss_pred ecCCCeecccccccCCeeEEEEEeceEEEEEEccCCc-----eEEEEEec---CCcEEEEcCCcEEEEeeCCC-CeEEEE
Q 018395 230 LDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGK-----RVLETTVK---AGNLFIVPRFYVVSKIADPD-GLAWFS 300 (356)
Q Consensus 230 l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~-----~~~~~~l~---~Gdv~vvP~g~~h~~~~~~~-~~~~~~ 300 (356)
-.+|.++..|+|.. -.++++|++|++..-++|-... +.....|. ....++||+|++|-..+-++ +++++.
T Consensus 60 s~~GvlRG~H~h~~-q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly 138 (174)
T 3ejk_A 60 VLPRRVKAWKRHSL-MTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVAN 138 (174)
T ss_dssp ECBTCEEEEEEESS-CCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEE
T ss_pred CCCCCEECcEecCC-CceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEE
Confidence 47899999999987 8899999999999999986531 23455777 67899999999999977544 677666
Q ss_pred EE
Q 018395 301 II 302 (356)
Q Consensus 301 ~~ 302 (356)
..
T Consensus 139 ~~ 140 (174)
T 3ejk_A 139 CT 140 (174)
T ss_dssp EE
T ss_pred EC
Confidence 54
No 190
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=97.32 E-value=0.0012 Score=56.74 Aligned_cols=79 Identities=13% Similarity=0.035 Sum_probs=58.2
Q ss_pred ceeEEEEecCCCeeccccccc-----CCeeEEEEEeceEEEEEEccCCce----------------E-EEEEecCCcEEE
Q 018395 223 CGADLVRLDGKAMCSPGFSCD-----SALQVTYIVRGSGRAQIVGPDGKR----------------V-LETTVKAGNLFI 280 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~-----~A~ei~~v~~G~~~~~iv~~~g~~----------------~-~~~~l~~Gdv~v 280 (356)
-....+.|.||.+.+.|+|+. +-.|=.+|..|.+++.+ ..... + -.-.|++||.+.
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~--~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvt 130 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYV--EGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYT 130 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEE--SSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEE
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEE--CCccccCcceeccCCceeeecCCcEEEECCCCEEE
Confidence 446778999999999999984 02466779999987766 22110 0 012799999999
Q ss_pred EcCCcEEEEeeCCCCeEEEEEEc
Q 018395 281 VPRFYVVSKIADPDGLAWFSIIT 303 (356)
Q Consensus 281 vP~g~~h~~~~~~~~~~~~~~~~ 303 (356)
+|+|.+|+..|+.+++.+..+.+
T Consensus 131 Ippg~~H~f~ageegvli~EvSt 153 (175)
T 2y0o_A 131 IPPNTKHWFQAGEEGAVVTEMSS 153 (175)
T ss_dssp ECTTCCEEEEEEEEEEEEEEEEE
T ss_pred ECCCCcEEEEeCCCCEEEEEEeC
Confidence 99999999988766766666643
No 191
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=97.31 E-value=0.001 Score=55.27 Aligned_cols=58 Identities=17% Similarity=0.201 Sum_probs=45.1
Q ss_pred ecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCC--CCeEEEEE
Q 018395 236 CSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADP--DGLAWFSI 301 (356)
Q Consensus 236 ~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~--~~~~~~~~ 301 (356)
..||.|. ..++.||++|++.+.+ ++ + ...+++||++++|+|.+|...+.. ++.++..+
T Consensus 31 ~~p~~h~--~~~i~~v~~G~~~~~i---~~-~--~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i 90 (164)
T 2arc_A 31 DRPLGMK--GYILNLTIRGQGVVKN---QG-R--EFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWV 90 (164)
T ss_dssp EETTCCS--SEEEEEEEEECEEEEE---TT-E--EEEECTTCEEEECTTCCEEEEECTTSSEEEEEEE
T ss_pred ccccCCC--ceEEEEEEEeEEEEEE---CC-E--EEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEE
Confidence 4589985 6899999999999987 22 2 357999999999999999975533 45665554
No 192
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.29 E-value=0.001 Score=59.60 Aligned_cols=68 Identities=13% Similarity=0.058 Sum_probs=55.3
Q ss_pred CceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 222 GCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 222 ~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
+..+..+++.||+..++|+|+. .|..||++|+.. +.. ..+.+||.++.|.|..|.-.+ .+++.++..
T Consensus 42 g~~~~lvr~~pG~~~p~H~H~g--~Ee~~VL~G~f~----d~~------~~~~~Gd~~~~P~g~~H~p~a-~~gc~~~vk 108 (223)
T 3o14_A 42 ARATSIVRYAPGSRFSAHTHDG--GEEFIVLDGVFQ----DEH------GDYPAGTYVRNPPTTSHVPGS-AEGCTIFVK 108 (223)
T ss_dssp CEEEEEEEECTTEECCCEECTT--CEEEEEEEEEEE----ETT------EEEETTEEEEECTTCEECCEE-SSCEEEEEE
T ss_pred ccEEEEEEECCCCCcccccCCC--CEEEEEEEeEEE----ECC------eEECCCeEEEeCCCCccccEe-CCCCEEEEE
Confidence 3457889999999999999974 699999999964 332 368899999999999998776 667776665
Q ss_pred E
Q 018395 302 I 302 (356)
Q Consensus 302 ~ 302 (356)
.
T Consensus 109 ~ 109 (223)
T 3o14_A 109 L 109 (223)
T ss_dssp E
T ss_pred e
Confidence 4
No 193
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.17 E-value=0.0015 Score=59.68 Aligned_cols=77 Identities=12% Similarity=0.031 Sum_probs=55.3
Q ss_pred CceEEEEEEecCCCc--ccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEec--CCCcEEE
Q 018395 35 GNIGAAKLALEKNGF--ALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNK--EDTELVV 110 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~--~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~--g~e~l~~ 110 (356)
.++-+....+..... ..+|||+.-|++||++|++. .+ +..+. ..+.+++||++++|+|..|.+... ++++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~G~~~-~i-~~~~~-~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~ 81 (276)
T 3gbg_A 5 KSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAK-LI-DKNCL-VSYEINSSSIILLKKNSIQRFSLTSLSDENINV 81 (276)
T ss_dssp TTEEEEEEEECTTCEEEEEEEECSSCEEEEESSSCEE-EE-ETTTT-EEEEECTTEEEEECTTCEEEEEEEECCSSCEEE
T ss_pred hhhhhhhhhhhcccchhccHhhhcceEEEEEecCceE-EE-CCccc-eeEEEcCCCEEEEcCCCceeeccccCCCcceEE
Confidence 345556666666554 37899999999999999999 65 32211 148999999999999999998765 3344555
Q ss_pred EEEe
Q 018395 111 LFLG 114 (356)
Q Consensus 111 l~i~ 114 (356)
+.+.
T Consensus 82 ~~i~ 85 (276)
T 3gbg_A 82 SVIT 85 (276)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 194
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=97.14 E-value=0.15 Score=46.81 Aligned_cols=69 Identities=19% Similarity=0.037 Sum_probs=55.5
Q ss_pred EecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCC--cEEEEEecCCCcEEEEEEee
Q 018395 43 ALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFG--VVTWWYNKEDTELVVLFLGD 115 (356)
Q Consensus 43 ~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G--~~H~~~N~g~e~l~~l~i~~ 115 (356)
...|+.-+.+|-| +-+-+-||++|+..-. +.-|. ...+++||+-.+-+| +.|.-.|..+++++.+-+..
T Consensus 45 ~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWv 116 (277)
T 2p17_A 45 DIFERGTFDVHPHRGIETVTYVISGELEHF--DSKAG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLWV 116 (277)
T ss_dssp EEECTTCCCCEEECSEEEEEEEEESCEEEE--ETTTE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCcEEEEEEEEeEEEEe--eCCCC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEEe
Confidence 6688888999999 5566999999998774 55443 378999999999987 78999998777788777665
No 195
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.13 E-value=0.013 Score=49.86 Aligned_cols=131 Identities=18% Similarity=0.253 Sum_probs=82.7
Q ss_pred CCCcEEEEeCCCCCCC--ccccCceeEEEEecCCCeecccccccCCeeEEEEEeceE-EEEEEccCCceE---EEEEecC
Q 018395 202 KNGGRVVLLNTKNLPL--VGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSG-RAQIVGPDGKRV---LETTVKA 275 (356)
Q Consensus 202 ~~gG~~~~~~~~~~p~--l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~-~~~iv~~~g~~~---~~~~l~~ 275 (356)
+.||+.++..... |. -..-..+....-|.+|... |||...+.|+-|...|.. ++.++.++|... +-.++.+
T Consensus 27 PEGG~yret~rs~-~~~~~~R~~~T~IYfLL~~g~~S--~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~ 103 (170)
T 1yud_A 27 VEGGFYRSSYRSE-TAFDPSRQLWSSIYFLLRTGEVS--HFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAA 103 (170)
T ss_dssp TTSSEEEEEEECS-SBSSSSSBSCEEEEEEEETTCCE--EEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTT
T ss_pred CCCceEEEeecCC-CCCCCCCccceEEEEEECCCCCC--eeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCccc
Confidence 4577777666543 11 1122356777789999865 555544899999999985 999999988531 1115788
Q ss_pred CcE--EEEcCCcEEEEeeCCCCeEEEEEEcCCCCceeccccccccccCCCHHHHHHHcCCCHHHHHHHH
Q 018395 276 GNL--FIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFR 342 (356)
Q Consensus 276 Gdv--~vvP~g~~h~~~~~~~~~~~~~~~~~~~p~~~~laG~~s~l~~~p~~vl~~af~~~~~~~~~l~ 342 (356)
|++ ++||+|.+........+..+++..-+ |++.+- =+.-.+.+-|.+.|---++.+++|.
T Consensus 104 Ge~pQ~vVP~G~wqaa~~~~g~~~LV~C~Va--PGF~f~-----dfel~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 104 GERPQFLVPKGCIFGSAMNQDGFSLVGCMVS--PGFTFD-----DFELFSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp TEESCEEECTTCEEEEEESSSSEEEEEEEES--SCCCGG-----GCCBCBHHHHHHSCCTTHHHHTTSC
T ss_pred CceeEEEECCCCEEEEEECCCCcEEEEEEEC--CCccCC-----ceEEcCHHHHHhHCchhHHHHHHhh
Confidence 999 99999999998443224444433323 233221 0122356777777766667776664
No 196
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=97.11 E-value=0.0014 Score=59.94 Aligned_cols=66 Identities=14% Similarity=0.164 Sum_probs=48.3
Q ss_pred cCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 231 DGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 231 ~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
.|+.-.-=| |.. ..|+.|+++|..++.+.+. |. .-+-.|++||+|++|+|.+|.=.+. +++..+.+
T Consensus 39 GpN~R~d~H-~~~-~dE~FyqlkG~m~l~~~d~-g~-~~~V~i~eGemfllP~gv~HsP~r~-~et~gLvi 104 (286)
T 2qnk_A 39 GPNTRKDYH-IEE-GEEVFYQLEGDMVLRVLEQ-GK-HRDVVIRQGEIFLLPARVPHSPQRF-ANTVGLVV 104 (286)
T ss_dssp SCBCCCCEE-ECS-SCEEEEEEESCEEEEEEET-TE-EEEEEECTTEEEEECTTCCEEEEEC-TTCEEEEE
T ss_pred CCCcCccCc-CCC-CCeEEEEEeCeEEEEEEeC-Cc-eeeEEECCCeEEEeCCCCCcCCccc-CCeEEEEE
Confidence 344334445 555 8999999999999999984 42 2245899999999999999997663 34444444
No 197
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=97.08 E-value=0.0049 Score=54.50 Aligned_cols=79 Identities=14% Similarity=-0.011 Sum_probs=63.3
Q ss_pred ceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEc--cCCceEE---EEEecCCcEEEEcC--CcEEEE-ee-CC
Q 018395 223 CGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVG--PDGKRVL---ETTVKAGNLFIVPR--FYVVSK-IA-DP 293 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~--~~g~~~~---~~~l~~Gdv~vvP~--g~~h~~-~~-~~ 293 (356)
+.+..+...||.-.++|-|.. +.+++|++|+.+.++.. .+|..+- ...+.+||+++++. |.+|.+ |+ ++
T Consensus 79 ~~v~~l~w~PGq~spiHdH~~--~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 79 FSIVSFVWGPGQRTPIHDHTV--WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp CEEEEEEECTTCBCCSBCCSS--CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred EEEEEEEeCCCcccCcccCCc--ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 668888999999999999974 79999999999999865 3342210 35899999999999 999999 56 46
Q ss_pred CCeEEEEEEc
Q 018395 294 DGLAWFSIIT 303 (356)
Q Consensus 294 ~~~~~~~~~~ 303 (356)
+.+..|-++.
T Consensus 157 ~~avsLHvY~ 166 (208)
T 2gm6_A 157 RVSISIHVYG 166 (208)
T ss_dssp SCEEEEEEES
T ss_pred CcEEEEEEEc
Confidence 6777776663
No 198
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=96.98 E-value=0.0049 Score=54.60 Aligned_cols=79 Identities=11% Similarity=0.011 Sum_probs=63.6
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcC--CCc----eEEEEEcCCCEEEeCCC--cEEEEEec-CC
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLP--EKE----EKVVAIKKGDGIALPFG--VVTWWYNK-ED 105 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~--~~~----~~~~~l~~GDv~~iP~G--~~H~~~N~-g~ 105 (356)
..+++..+...||...++|=|.+..++.|++|+.+..+... ++. .....+.+||+.++.++ .+|.+.|. ++
T Consensus 71 ~~f~v~~l~W~PGq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 71 QRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SSCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CCEEEEEEEECCCCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 36788999999999999999988999999999998877542 222 11368999999999987 89999997 46
Q ss_pred CcEEEEEE
Q 018395 106 TELVVLFL 113 (356)
Q Consensus 106 e~l~~l~i 113 (356)
++.+-|=+
T Consensus 151 ~~avSLHv 158 (211)
T 3uss_A 151 RTSISIHV 158 (211)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 66554444
No 199
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.96 E-value=0.005 Score=58.60 Aligned_cols=73 Identities=16% Similarity=0.215 Sum_probs=55.7
Q ss_pred EEecC-CCcccCeeeCCCEEEEEEeCeEEEEEE-cCCC---------------------------------ceEEEEEcC
Q 018395 42 LALEK-NGFALPHYCDSARVAYVLQGSGVAGIV-LPEK---------------------------------EEKVVAIKK 86 (356)
Q Consensus 42 ~~l~P-g~~~~pH~h~a~e~~yVl~G~~~~~vv-~~~~---------------------------------~~~~~~l~~ 86 (356)
+-+.| |+...+||-..+-++..+.|+=++.+. .|.. ......|++
T Consensus 145 ~~~gp~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~p 224 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTP 224 (342)
T ss_dssp EEEECSSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECT
T ss_pred EEEeCCCCCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECC
Confidence 55666 888899998777888899999999888 4331 124579999
Q ss_pred CCEEEeCCCcEEEEEecCCCcEEEEEEe
Q 018395 87 GDGIALPFGVVTWWYNKEDTELVVLFLG 114 (356)
Q Consensus 87 GDv~~iP~G~~H~~~N~g~e~l~~l~i~ 114 (356)
||++|+|+|+.|+..+.+++...-+++.
T Consensus 225 GD~LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 225 GTMLYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp TCEEEECTTCEEEEECSSCEEEEEEEEC
T ss_pred CcEEEeCCCccEEEEECCCCceEEEEEC
Confidence 9999999999999999865444444443
No 200
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=96.94 E-value=0.0011 Score=53.20 Aligned_cols=57 Identities=9% Similarity=0.051 Sum_probs=43.1
Q ss_pred eEEEEecCCCeecccccccCCe-eEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEe
Q 018395 225 ADLVRLDGKAMCSPGFSCDSAL-QVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKI 290 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~-ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~ 290 (356)
+..=..+||.... +.. .. |++||++|+++++.- +|.. .++++||+++||+|+--...
T Consensus 44 ~GvWe~tPG~~~~---~~~-~~~E~~~iLeG~~~lt~d--dG~~---~~l~aGD~~~~P~G~~gtWe 101 (116)
T 3es4_A 44 VAVWMAEPGIYNY---AGR-DLEETFVVVEGEALYSQA--DADP---VKIGPGSIVSIAKGVPSRLE 101 (116)
T ss_dssp EEEEEECSEEEEE---CCC-SEEEEEEEEECCEEEEET--TCCC---EEECTTEEEEECTTCCEEEE
T ss_pred EEEEecCCceeEC---eeC-CCcEEEEEEEeEEEEEeC--CCeE---EEECCCCEEEECCCCeEEEE
Confidence 3344788998763 333 44 999999999998854 3543 47999999999999987763
No 201
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.90 E-value=0.0059 Score=53.46 Aligned_cols=72 Identities=18% Similarity=0.078 Sum_probs=59.1
Q ss_pred EecCCCcccCeeeCCCEEEEEEe-CeEEEEEEcCC-----CceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEee
Q 018395 43 ALEKNGFALPHYCDSARVAYVLQ-GSGVAGIVLPE-----KEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGD 115 (356)
Q Consensus 43 ~l~Pg~~~~pH~h~a~e~~yVl~-G~~~~~vv~~~-----~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~ 115 (356)
.-.+|.++..|+|...++++|++ |+...-+++-. ++.....|..+..++||+|..|-..+.++. ..++...+
T Consensus 66 ~s~~GvlRGlH~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y~~s 143 (197)
T 1nxm_A 66 FSRKNVLRGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYSYLVN 143 (197)
T ss_dssp EEETTBEEEEEECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEEEEES
T ss_pred ECCCCCcceeeecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEEECC
Confidence 33789999999998889999999 99766677764 455678999999999999999999998765 66665443
No 202
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=96.83 E-value=0.021 Score=50.12 Aligned_cols=82 Identities=7% Similarity=0.012 Sum_probs=64.2
Q ss_pred ceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEcc--CCc----eEEEEEecCCcEEEE-cCCcEEEE-eeC-C
Q 018395 223 CGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGP--DGK----RVLETTVKAGNLFIV-PRFYVVSK-IAD-P 293 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~--~g~----~~~~~~l~~Gdv~vv-P~g~~h~~-~~~-~ 293 (356)
.++..+...||.-.++|=|.+ ++.+++|++|+.+.+..+. .|. ..-...+++|||.++ |.+.+|.+ |++ +
T Consensus 70 ~~l~ll~W~PGq~SpiHDH~~-s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 70 FNLMILCWGEGHGSSIHDHTD-SHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp CEEEEEEECTTCBCCEECCTT-CEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred eEEEEEEECCCCcCCCccCCC-ceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 667778999999999999998 9999999999999998763 221 112358999999999 88889999 556 5
Q ss_pred CCeEEEEEEcCC
Q 018395 294 DGLAWFSIITTP 305 (356)
Q Consensus 294 ~~~~~~~~~~~~ 305 (356)
+.+.-|=++...
T Consensus 149 ~~avSlHvY~pp 160 (200)
T 3eln_A 149 EPAVSLHLYSPP 160 (200)
T ss_dssp CCEEEEEEEESC
T ss_pred CCEEEEEeCCCC
Confidence 666666555443
No 203
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.81 E-value=0.012 Score=51.87 Aligned_cols=71 Identities=17% Similarity=0.166 Sum_probs=55.7
Q ss_pred ecCCCcccCeeeC----CCEEEEEEeCeEEEEEEcCC------CceEEEEEcC--CCEEEeCCCcEEEEEecCCCcEEEE
Q 018395 44 LEKNGFALPHYCD----SARVAYVLQGSGVAGIVLPE------KEEKVVAIKK--GDGIALPFGVVTWWYNKEDTELVVL 111 (356)
Q Consensus 44 l~Pg~~~~pH~h~----a~e~~yVl~G~~~~~vv~~~------~~~~~~~l~~--GDv~~iP~G~~H~~~N~g~e~l~~l 111 (356)
..+|.++..|+|. ..++++|++|++..-+++-. ++.....|.+ +..++||+|+.|-+.+.++. ..++
T Consensus 77 ~~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a~~~ 155 (205)
T 3ryk_A 77 AEAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-TIVM 155 (205)
T ss_dssp SSTTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-EEEE
T ss_pred CCCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-EEEE
Confidence 3689999999994 68999999999876667632 3345677865 89999999999999998876 5555
Q ss_pred EEee
Q 018395 112 FLGD 115 (356)
Q Consensus 112 ~i~~ 115 (356)
+..+
T Consensus 156 Y~~s 159 (205)
T 3ryk_A 156 YKVD 159 (205)
T ss_dssp EEES
T ss_pred EEcC
Confidence 5443
No 204
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.79 E-value=0.0044 Score=54.81 Aligned_cols=66 Identities=11% Similarity=0.086 Sum_probs=49.6
Q ss_pred EEEEecCCCcccC-eeeCCCEEEEEEeCeEEEEEEcCCC----------------------------------ceEEEEE
Q 018395 40 AKLALEKNGFALP-HYCDSARVAYVLQGSGVAGIVLPEK----------------------------------EEKVVAI 84 (356)
Q Consensus 40 ~~~~l~Pg~~~~p-H~h~a~e~~yVl~G~~~~~vv~~~~----------------------------------~~~~~~l 84 (356)
..+-|.|.+...+ |+-..+-++.++.|+=+..+..|.. +.....|
T Consensus 126 ~~~wiG~~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 205 (235)
T 4gjz_A 126 INAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCIL 205 (235)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEE
T ss_pred eEEEEeCCCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEE
Confidence 3455666555554 4446677888999999999887641 1135689
Q ss_pred cCCCEEEeCCCcEEEEEecCC
Q 018395 85 KKGDGIALPFGVVTWWYNKED 105 (356)
Q Consensus 85 ~~GDv~~iP~G~~H~~~N~g~ 105 (356)
++||+++||+|+.|++.|.++
T Consensus 206 ~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 206 SPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp CTTCEEEECTTCEEEEEESSS
T ss_pred CCCCEEEeCCCCcEEEEECCC
Confidence 999999999999999999864
No 205
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=96.79 E-value=0.015 Score=50.36 Aligned_cols=70 Identities=14% Similarity=0.112 Sum_probs=55.3
Q ss_pred cCCCcccCeee---CCCEEEEEEeCeEEEEEEcCC------CceEEEEEcC--CCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 45 EKNGFALPHYC---DSARVAYVLQGSGVAGIVLPE------KEEKVVAIKK--GDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 45 ~Pg~~~~pH~h---~a~e~~yVl~G~~~~~vv~~~------~~~~~~~l~~--GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
.+|.++..|+| ...++++|++|++..-+++-. ++.....|.+ +..++||+|+.|-+.+.+++ +.++..
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEe
Confidence 48999999999 678999999999866666643 2445677754 69999999999999998776 666655
Q ss_pred ee
Q 018395 114 GD 115 (356)
Q Consensus 114 ~~ 115 (356)
.+
T Consensus 135 ~s 136 (185)
T 1ep0_A 135 CT 136 (185)
T ss_dssp ES
T ss_pred cC
Confidence 44
No 206
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.76 E-value=0.0065 Score=53.69 Aligned_cols=66 Identities=12% Similarity=0.075 Sum_probs=49.6
Q ss_pred EEEEecCCCe-ecccccccCCeeEEEEEeceEEEEEEccCC---------------------------------ceEEEE
Q 018395 226 DLVRLDGKAM-CSPGFSCDSALQVTYIVRGSGRAQIVGPDG---------------------------------KRVLET 271 (356)
Q Consensus 226 ~~v~l~~g~~-~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g---------------------------------~~~~~~ 271 (356)
..+-+.++|. ..+|+.+. .-+..++.|+=++.++.|.- .+.++.
T Consensus 126 ~~~wiG~~gs~t~~H~D~~--~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~ 203 (235)
T 4gjz_A 126 INAWFGPQGTISPLHQDPQ--QNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSC 203 (235)
T ss_dssp EEEEEECTTCEEEEECCSS--EEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEE
T ss_pred eEEEEeCCCCCceeeeccc--cceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEE
Confidence 4455666544 45677654 56999999999999998741 023567
Q ss_pred EecCCcEEEEcCCcEEEEeeCC
Q 018395 272 TVKAGNLFIVPRFYVVSKIADP 293 (356)
Q Consensus 272 ~l~~Gdv~vvP~g~~h~~~~~~ 293 (356)
.|++||+++||+|++|+..+-+
T Consensus 204 ~l~pGD~LyiP~gW~H~V~~l~ 225 (235)
T 4gjz_A 204 ILSPGEILFIPVKYWHYVRALD 225 (235)
T ss_dssp EECTTCEEEECTTCEEEEEESS
T ss_pred EECCCCEEEeCCCCcEEEEECC
Confidence 8999999999999999986643
No 207
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=96.72 E-value=0.0076 Score=59.34 Aligned_cols=65 Identities=17% Similarity=0.185 Sum_probs=51.3
Q ss_pred EEEEecCCCeec--ccccccCCeeEEEEEeceEEEEEEccCC---------------ceEEEEEecCCcEEEEcCCcEEE
Q 018395 226 DLVRLDGKAMCS--PGFSCDSALQVTYIVRGSGRAQIVGPDG---------------KRVLETTVKAGNLFIVPRFYVVS 288 (356)
Q Consensus 226 ~~v~l~~g~~~~--PH~h~~~A~ei~~v~~G~~~~~iv~~~g---------------~~~~~~~l~~Gdv~vvP~g~~h~ 288 (356)
+.+.+.++|-.. |||-. -+-+++.+.|+=++.+..|.- ...++..|++|||+++|+||+|+
T Consensus 141 ~n~y~~~~g~~g~~~H~D~--~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~ 218 (442)
T 2xdv_A 141 SNVYITPAGSQGLPPHYDD--VEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQ 218 (442)
T ss_dssp EEEEEECTTCBCSCSEECS--SEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEE
T ss_pred cceEECCCCCCCccceECC--cceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEE
Confidence 455677777554 99975 467888899999999988851 22456799999999999999999
Q ss_pred EeeC
Q 018395 289 KIAD 292 (356)
Q Consensus 289 ~~~~ 292 (356)
..+.
T Consensus 219 ~~s~ 222 (442)
T 2xdv_A 219 ADTP 222 (442)
T ss_dssp EECC
T ss_pred EEec
Confidence 8664
No 208
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=96.71 E-value=0.015 Score=50.80 Aligned_cols=72 Identities=17% Similarity=0.180 Sum_probs=55.6
Q ss_pred EecCCCcccCeee-C---CCEEEEEEeCeEEEEEEcCC------CceEEEEEcC--CCEEEeCCCcEEEEEecCCCcEEE
Q 018395 43 ALEKNGFALPHYC-D---SARVAYVLQGSGVAGIVLPE------KEEKVVAIKK--GDGIALPFGVVTWWYNKEDTELVV 110 (356)
Q Consensus 43 ~l~Pg~~~~pH~h-~---a~e~~yVl~G~~~~~vv~~~------~~~~~~~l~~--GDv~~iP~G~~H~~~N~g~e~l~~ 110 (356)
.-.+|.++..|+| . ..++++|++|++..-+|+-. ++.....|.+ +..++||+|+.|-+.|.++. ..+
T Consensus 71 ~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~ 149 (196)
T 1wlt_A 71 FSRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVI 149 (196)
T ss_dssp EECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEE
T ss_pred ECCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEE
Confidence 3358999999999 4 68999999999966666643 2345677864 79999999999999998774 555
Q ss_pred EEEee
Q 018395 111 LFLGD 115 (356)
Q Consensus 111 l~i~~ 115 (356)
+...+
T Consensus 150 ly~~s 154 (196)
T 1wlt_A 150 YFITH 154 (196)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 55443
No 209
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.68 E-value=0.0063 Score=57.94 Aligned_cols=73 Identities=11% Similarity=0.087 Sum_probs=55.4
Q ss_pred EEecC-CCeecccccccCCeeEEEEEeceEEEEEE-ccCC--------------------------------ceEEEEEe
Q 018395 228 VRLDG-KAMCSPGFSCDSALQVTYIVRGSGRAQIV-GPDG--------------------------------KRVLETTV 273 (356)
Q Consensus 228 v~l~~-g~~~~PH~h~~~A~ei~~v~~G~~~~~iv-~~~g--------------------------------~~~~~~~l 273 (356)
+-+.| |+...|||.+. +-+++.+.|+=++.+. .|.- ...++..|
T Consensus 145 ~~~gp~g~~~~~H~D~~--dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L 222 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDAY--TNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNL 222 (342)
T ss_dssp EEEECSSCCCCSEECSS--EEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEE
T ss_pred EEEeCCCCCCCCeECCh--hcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEE
Confidence 55666 88889999764 5788899999999999 5431 11356799
Q ss_pred cCCcEEEEcCCcEEEEeeC-CCCeEEEEEE
Q 018395 274 KAGNLFIVPRFYVVSKIAD-PDGLAWFSII 302 (356)
Q Consensus 274 ~~Gdv~vvP~g~~h~~~~~-~~~~~~~~~~ 302 (356)
++|||++||+||+|+..+. ++...-+++.
T Consensus 223 ~pGD~LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 223 TPGTMLYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp CTTCEEEECTTCEEEEECSSCEEEEEEEEC
T ss_pred CCCcEEEeCCCccEEEEECCCCceEEEEEC
Confidence 9999999999999998775 3344455555
No 210
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.65 E-value=0.02 Score=49.55 Aligned_cols=70 Identities=10% Similarity=0.019 Sum_probs=55.0
Q ss_pred cCCCcccCeee---CCCEEEEEEeCeEEEEEEcCC------CceEEEEEcC--CCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 45 EKNGFALPHYC---DSARVAYVLQGSGVAGIVLPE------KEEKVVAIKK--GDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 45 ~Pg~~~~pH~h---~a~e~~yVl~G~~~~~vv~~~------~~~~~~~l~~--GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
.+|.++..|+| ...++++|++|++..-+++-. ++.....|.+ +..++||+|+.|-+.+.+++ +.++..
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 135 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYK 135 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEe
Confidence 48999999999 568999999999866666642 2445577765 68999999999999998776 666655
Q ss_pred ee
Q 018395 114 GD 115 (356)
Q Consensus 114 ~~ 115 (356)
.+
T Consensus 136 ~s 137 (184)
T 2ixk_A 136 TT 137 (184)
T ss_dssp ES
T ss_pred CC
Confidence 44
No 211
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.62 E-value=0.027 Score=49.57 Aligned_cols=70 Identities=19% Similarity=0.264 Sum_probs=55.1
Q ss_pred cCCCcccCeee-C---CCEEEEEEeCeEEEEEEcCC------CceEEEEEcC--CCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 45 EKNGFALPHYC-D---SARVAYVLQGSGVAGIVLPE------KEEKVVAIKK--GDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 45 ~Pg~~~~pH~h-~---a~e~~yVl~G~~~~~vv~~~------~~~~~~~l~~--GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
.+|.++..|+| . ..++++|++|++.--+|+-. ++.....|.+ +..++||+|+.|-+.+.+++ ..++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEEE
Confidence 58999999999 4 68999999999876667643 2345677765 58999999999999998877 55555
Q ss_pred Eee
Q 018395 113 LGD 115 (356)
Q Consensus 113 i~~ 115 (356)
..+
T Consensus 134 ~~s 136 (205)
T 1oi6_A 134 MLS 136 (205)
T ss_dssp EES
T ss_pred ecC
Confidence 443
No 212
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.54 E-value=0.013 Score=47.45 Aligned_cols=73 Identities=8% Similarity=-0.007 Sum_probs=57.5
Q ss_pred cCCCeeccc---c-cccCCeeEEEEEeceEEEEEEccCCc-e-EEEEEecCCcEEEEcCCcEEEEeeCCCCeEE-EEEEc
Q 018395 231 DGKAMCSPG---F-SCDSALQVTYIVRGSGRAQIVGPDGK-R-VLETTVKAGNLFIVPRFYVVSKIADPDGLAW-FSIIT 303 (356)
Q Consensus 231 ~~g~~~~PH---~-h~~~A~ei~~v~~G~~~~~iv~~~g~-~-~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~-~~~~~ 303 (356)
-|+++++.| . ++. ..+.+.|++|+.++-..+.+|+ . .-..-+.+|+..+||++.+|.+..-+++++| +.|+.
T Consensus 22 lP~~ll~~H~~~~Tk~G-twg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~leFyc 100 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPG-VYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFV 100 (127)
T ss_dssp SCGGGGSSBCCTTCCTT-EEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEEEEEEEE
T ss_pred ChHHHHhhccccCCCCC-EEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEEEEEEEe
Confidence 467788999 4 887 8899999999999998888775 1 1123577999999999999999875557776 67764
Q ss_pred C
Q 018395 304 T 304 (356)
Q Consensus 304 ~ 304 (356)
.
T Consensus 101 ~ 101 (127)
T 3bb6_A 101 A 101 (127)
T ss_dssp C
T ss_pred C
Confidence 3
No 213
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.46 E-value=0.045 Score=47.26 Aligned_cols=70 Identities=13% Similarity=0.070 Sum_probs=54.1
Q ss_pred cCCCcccCeeeC----CCEEEEEEeCeEEEEEEcCC------CceEEEEEcC--CCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 45 EKNGFALPHYCD----SARVAYVLQGSGVAGIVLPE------KEEKVVAIKK--GDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 45 ~Pg~~~~pH~h~----a~e~~yVl~G~~~~~vv~~~------~~~~~~~l~~--GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
.+|.++..|+|. ..++++|++|++.--+++-. ++.....|.+ +..++||+|+.|-+.+.+++ ..++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFLY 133 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 489999999993 58999999999866666643 2345577765 68999999999999998776 55555
Q ss_pred Eee
Q 018395 113 LGD 115 (356)
Q Consensus 113 i~~ 115 (356)
..+
T Consensus 134 ~~s 136 (183)
T 1dzr_A 134 KAT 136 (183)
T ss_dssp EES
T ss_pred EcC
Confidence 443
No 214
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.45 E-value=0.031 Score=49.58 Aligned_cols=70 Identities=11% Similarity=0.078 Sum_probs=54.4
Q ss_pred cCCCcccCeee-C---CCEEEEEEeCeEEEEEEcCC------CceEEEEEcC--CCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 45 EKNGFALPHYC-D---SARVAYVLQGSGVAGIVLPE------KEEKVVAIKK--GDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 45 ~Pg~~~~pH~h-~---a~e~~yVl~G~~~~~vv~~~------~~~~~~~l~~--GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
.+|.++..|+| . ..++++|++|++.--+++-. ++.....|.+ +..++||+|+.|-+.|.+++ ..++.
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEEE
Confidence 58999999999 4 69999999999866666642 2345577765 58999999999999998776 55555
Q ss_pred Eee
Q 018395 113 LGD 115 (356)
Q Consensus 113 i~~ 115 (356)
..+
T Consensus 142 ~~s 144 (216)
T 2c0z_A 142 LSS 144 (216)
T ss_dssp EES
T ss_pred ecC
Confidence 443
No 215
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=96.44 E-value=0.019 Score=54.13 Aligned_cols=60 Identities=20% Similarity=0.299 Sum_probs=40.0
Q ss_pred ceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeC
Q 018395 223 CGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIAD 292 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~ 292 (356)
.++.++++..+.-. .... ...|+.|++|++.+.. +|. ...|++||.++||++...+...|
T Consensus 251 F~~~~~~~~~~~~~---~~~~-~~~il~v~~G~~~l~~---~~~---~~~l~~G~~~~vpa~~~~~~i~g 310 (319)
T 1qwr_A 251 FSVYKWDINGEAEM---AQDE-SFLICSVIEGSGLLKY---EDK---TCPLKKGDHFILPAQMPDFTIKG 310 (319)
T ss_dssp CEEEEEEEEEEEEE---CCCS-SCEEEEEEEEEEEEEE---TTE---EEEEETTCEEEECTTCCCEEEEE
T ss_pred EEEEEEEECCceEE---ccCC-ccEEEEEEcCeEEEEE---CCE---EEEEcCCcEEEEeCCCceEEEEe
Confidence 45666666644222 1224 6689999999998864 333 24799999999999875444433
No 216
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.43 E-value=0.051 Score=48.44 Aligned_cols=72 Identities=15% Similarity=0.123 Sum_probs=55.4
Q ss_pred EecCCCcccCeee-C---CCEEEEEEeCeEEEEEEcCC------CceEEEEEcC--CCEEEeCCCcEEEEEecCCCcEEE
Q 018395 43 ALEKNGFALPHYC-D---SARVAYVLQGSGVAGIVLPE------KEEKVVAIKK--GDGIALPFGVVTWWYNKEDTELVV 110 (356)
Q Consensus 43 ~l~Pg~~~~pH~h-~---a~e~~yVl~G~~~~~vv~~~------~~~~~~~l~~--GDv~~iP~G~~H~~~N~g~e~l~~ 110 (356)
.-.+|.++..|+| . ..++++|++|++.--+|+-. ++.....|.+ +..++||+|+.|-+.|.+++ ..+
T Consensus 72 ~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~v 150 (225)
T 1upi_A 72 VSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-STV 150 (225)
T ss_dssp EECTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS-EEE
T ss_pred eCCCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC-EEE
Confidence 3358999999999 4 68999999999876666642 2345577765 58999999999999998877 555
Q ss_pred EEEee
Q 018395 111 LFLGD 115 (356)
Q Consensus 111 l~i~~ 115 (356)
+...+
T Consensus 151 ly~~s 155 (225)
T 1upi_A 151 MYLCS 155 (225)
T ss_dssp EEEES
T ss_pred EEecC
Confidence 55443
No 217
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.25 E-value=0.016 Score=55.28 Aligned_cols=73 Identities=14% Similarity=0.187 Sum_probs=54.9
Q ss_pred EEec-CCCeecccccccCCeeEEEEEeceEEEEEEccCC----------------------------------ceEEEEE
Q 018395 228 VRLD-GKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDG----------------------------------KRVLETT 272 (356)
Q Consensus 228 v~l~-~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g----------------------------------~~~~~~~ 272 (356)
+-+. +|+...+|+.+. +-+..+++|+=++.++.|.- .+.+...
T Consensus 187 l~iG~~gs~t~~H~D~~--~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~ 264 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ--QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETV 264 (349)
T ss_dssp EEEECTTCEEEEECCSE--EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEE
T ss_pred EEEECCCCCccceECCh--hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEE
Confidence 5565 456778899775 57999999999999988741 0356789
Q ss_pred ecCCcEEEEcCCcEEEEeeCC-CC-eEEEEEE
Q 018395 273 VKAGNLFIVPRFYVVSKIADP-DG-LAWFSII 302 (356)
Q Consensus 273 l~~Gdv~vvP~g~~h~~~~~~-~~-~~~~~~~ 302 (356)
|++||+++||.||+|+..+-+ +. ..-+.+.
T Consensus 265 l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w 296 (349)
T 3d8c_A 265 VGPGDVLYIPMYWWHHIESLLNGGITITVNFW 296 (349)
T ss_dssp ECTTCEEEECTTCEEEEEECTTSCCEEEEEEE
T ss_pred ECCCCEEEECCCCcEEEEEcCCCCcEEEEEEE
Confidence 999999999999999997754 33 3444443
No 218
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=96.25 E-value=0.032 Score=48.34 Aligned_cols=71 Identities=11% Similarity=-0.001 Sum_probs=54.6
Q ss_pred cCCCeeccccc--ccCCeeEEEEEeceEEEEEEccCC-----ceEEEEEecC--CcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 231 DGKAMCSPGFS--CDSALQVTYIVRGSGRAQIVGPDG-----KRVLETTVKA--GNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 231 ~~g~~~~PH~h--~~~A~ei~~v~~G~~~~~iv~~~g-----~~~~~~~l~~--Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
.+|.++-.|+| .. -.++++|++|++..-++|-.- .+.....|.+ +..++||+|++|-..+-+++++++-.
T Consensus 56 ~~GvlRGlH~q~p~~-q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKP-QGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSC-CCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEE
T ss_pred cCCeEecceecCCcc-ccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEe
Confidence 47999999999 44 579999999999877777642 1334556765 68999999999999876666666654
Q ss_pred E
Q 018395 302 I 302 (356)
Q Consensus 302 ~ 302 (356)
.
T Consensus 135 ~ 135 (185)
T 1ep0_A 135 C 135 (185)
T ss_dssp E
T ss_pred c
Confidence 3
No 219
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=96.20 E-value=0.12 Score=49.88 Aligned_cols=59 Identities=12% Similarity=0.100 Sum_probs=39.8
Q ss_pred ceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEee
Q 018395 223 CGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIA 291 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~ 291 (356)
.++.++++.++.. +.... +..|+.|++|++.++. .+ . ...|++||.++||++..-+...
T Consensus 324 F~v~~~~l~~~~~---~~~~~-~~~il~v~~G~~~l~~---~~-~--~~~l~~G~~~fvpa~~~~~~i~ 382 (394)
T 2wfp_A 324 FAFSLHDLALQET---SIGQH-SAAILFCVEGEAVLRK---DE-Q--RLVLKPGESAFIGADESPVNAS 382 (394)
T ss_dssp CEEEEEECCSSCE---EECCS-SCEEEEEEEEEEEEEE---TT-E--EEEECTTCEEEECGGGCCEEEE
T ss_pred EEEEEEEEcCCeE---EecCC-CcEEEEEEeceEEEEE---CC-e--EEEEccCcEEEEeCCCceEEEE
Confidence 5567777765532 22223 5689999999998653 22 2 2479999999999986444433
No 220
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=96.15 E-value=0.02 Score=56.30 Aligned_cols=64 Identities=20% Similarity=0.245 Sum_probs=49.5
Q ss_pred EEEecCCCcc--cCeeeCCCEEEEEEeCeEEEEEEcCCC----------------ceEEEEEcCCCEEEeCCCcEEEEEe
Q 018395 41 KLALEKNGFA--LPHYCDSARVAYVLQGSGVAGIVLPEK----------------EEKVVAIKKGDGIALPFGVVTWWYN 102 (356)
Q Consensus 41 ~~~l~Pg~~~--~pH~h~a~e~~yVl~G~~~~~vv~~~~----------------~~~~~~l~~GDv~~iP~G~~H~~~N 102 (356)
.+-+.|++-. .+||-..+-+++.+.|+=+..+..+.. ......|++||++|+|+|+.|+..+
T Consensus 142 n~y~~~~g~~g~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s 221 (442)
T 2xdv_A 142 NVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADT 221 (442)
T ss_dssp EEEEECTTCBCSCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEEC
T ss_pred ceEECCCCCCCccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEe
Confidence 3455565544 499977777888899999998877641 1235799999999999999999998
Q ss_pred cC
Q 018395 103 KE 104 (356)
Q Consensus 103 ~g 104 (356)
.+
T Consensus 222 ~~ 223 (442)
T 2xdv_A 222 PA 223 (442)
T ss_dssp CS
T ss_pred cC
Confidence 65
No 221
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=96.08 E-value=0.07 Score=49.70 Aligned_cols=58 Identities=14% Similarity=0.162 Sum_probs=38.5
Q ss_pred ceeEEEEecCCCeecccccccCCe-eEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeC
Q 018395 223 CGADLVRLDGKAMCSPGFSCDSAL-QVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIAD 292 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~~A~-ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~ 292 (356)
.++.++++... .. +.. . .. .++.|++| +.+.. +|+. ..|++||.++||++...+...|
T Consensus 230 F~v~~~~~~~~-~~--~~~-~-~~~~il~v~~G-~~i~~---~~~~---~~l~~G~~~~ipa~~~~~~i~g 288 (300)
T 1zx5_A 230 FGLEVVDVTGT-AE--IKT-G-GVMNILYAAEG-YFILR---GKET---ADLHRGYSCLVPASTDSFTVES 288 (300)
T ss_dssp EEEEEEEEEEE-EE--EEC-C-SBCEEEEEEES-CEEEE---SSSE---EEECTTCEEEECTTCCEEEEEE
T ss_pred EEEEEEEECCc-eE--Eec-C-CceEEEEEccc-EEEEe---CCeE---EEEccceEEEEeCCCceEEEEe
Confidence 44555666532 22 122 4 56 89999999 87765 3333 3699999999999986665444
No 222
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.08 E-value=0.029 Score=49.05 Aligned_cols=69 Identities=14% Similarity=0.053 Sum_probs=57.0
Q ss_pred cCCCeecccccccCCeeEEEEEe-ceEEEEEEccC-----CceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEE
Q 018395 231 DGKAMCSPGFSCDSALQVTYIVR-GSGRAQIVGPD-----GKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSII 302 (356)
Q Consensus 231 ~~g~~~~PH~h~~~A~ei~~v~~-G~~~~~iv~~~-----g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~ 302 (356)
.+|.++..|+|.. .++++|++ |++..-+||-. |+. ....|..+..++||+|++|-..+-+++++++-..
T Consensus 68 ~~GvlRGlH~h~q--~Klv~~~~~G~v~dV~VDlR~SpTfg~~-~~v~Ls~~~~L~IP~G~aHgf~~lsd~a~~~y~~ 142 (197)
T 1nxm_A 68 RKNVLRGLHAEPW--DKYISVADGGKVLGTWVDLREGETFGNT-YQTVIDASKSIFVPRGVANGFQVLSDFVAYSYLV 142 (197)
T ss_dssp ETTBEEEEEECSS--CEEEEECSSCCEEEEEEECBSSTTTTCE-EEEEECTTEEEEECTTEEEEEEECSSEEEEEEEE
T ss_pred CCCCcceeeeccc--ceEEEEcCCCEEEEEEEECCCCCCCCeE-EEEEeCCCcEEEeCCCeEEEEEeccCCeEEEEEC
Confidence 6799999999965 59999999 99988888876 433 4568888999999999999998877777766544
No 223
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=96.06 E-value=0.022 Score=56.45 Aligned_cols=66 Identities=18% Similarity=0.256 Sum_probs=51.5
Q ss_pred EEEEecCCCee--cccccccCCeeEEEEEeceEEEEEEccCC-------------------ceEEEEEecCCcEEEEcCC
Q 018395 226 DLVRLDGKAMC--SPGFSCDSALQVTYIVRGSGRAQIVGPDG-------------------KRVLETTVKAGNLFIVPRF 284 (356)
Q Consensus 226 ~~v~l~~g~~~--~PH~h~~~A~ei~~v~~G~~~~~iv~~~g-------------------~~~~~~~l~~Gdv~vvP~g 284 (356)
+.+.+.|+|-. .|||-+. +-+++-+.|+=++.+..|.- ...++..|++|||++||+|
T Consensus 166 ~N~Y~tp~Gs~g~~pH~D~~--DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g 243 (489)
T 4diq_A 166 SNVYLTPPNSQGFAPHYDDI--EAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRG 243 (489)
T ss_dssp EEEEEECSSBCCSCCBCCSS--EEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTT
T ss_pred ceEEecCCCcccccCccCCc--ceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCC
Confidence 45778887754 5999764 45777788888999988742 2245779999999999999
Q ss_pred cEEEEeeCC
Q 018395 285 YVVSKIADP 293 (356)
Q Consensus 285 ~~h~~~~~~ 293 (356)
++|+..+.+
T Consensus 244 ~~H~~~s~~ 252 (489)
T 4diq_A 244 FIHQAECQD 252 (489)
T ss_dssp CEEEEEBCS
T ss_pred CceEEEecC
Confidence 999997753
No 224
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.03 E-value=0.043 Score=47.44 Aligned_cols=71 Identities=6% Similarity=-0.032 Sum_probs=54.1
Q ss_pred cCCCeeccccc--ccCCeeEEEEEeceEEEEEEccCC-----ceEEEEEecC--CcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 231 DGKAMCSPGFS--CDSALQVTYIVRGSGRAQIVGPDG-----KRVLETTVKA--GNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 231 ~~g~~~~PH~h--~~~A~ei~~v~~G~~~~~iv~~~g-----~~~~~~~l~~--Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
.+|.++-.|+| .. -.++++|++|++..-++|-.- .+.....|.+ +..++||+|++|-..+-+++++++-.
T Consensus 57 ~~GvlRG~H~q~p~~-q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~ 135 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQA-QGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYK 135 (184)
T ss_dssp ETTBEEEEEEESSSC-CCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEE
T ss_pred CCCceeeEEeCCCCC-cCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCCEEEEEe
Confidence 38999999999 44 579999999999877777542 1334556665 68999999999999876666666654
Q ss_pred E
Q 018395 302 I 302 (356)
Q Consensus 302 ~ 302 (356)
.
T Consensus 136 ~ 136 (184)
T 2ixk_A 136 T 136 (184)
T ss_dssp E
T ss_pred C
Confidence 3
No 225
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=96.00 E-value=0.42 Score=46.82 Aligned_cols=59 Identities=14% Similarity=0.113 Sum_probs=38.1
Q ss_pred ceeEEEEec--CCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcE
Q 018395 223 CGADLVRLD--GKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYV 286 (356)
Q Consensus 223 ~s~~~v~l~--~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~ 286 (356)
.++.++++. +++-.. ..... ...|++|++|++++..- .++.. ...|++||+++||++-.
T Consensus 357 F~v~~~~~~~~~~~~~~-~~~~~-~~~illv~~G~g~i~~~--~~~~~-~~~l~~G~~~fvpa~~~ 417 (440)
T 1pmi_A 357 FSVLQTIFDKSKGGKQV-IEGLN-GPSIVIATNGKGTIQIT--GDDST-KQKIDTGYVFFVAPGSS 417 (440)
T ss_dssp CEEEEEECCTTTCCEEE-ECCCS-SCEEEEEEESEEEEEET--TCGGG-CEEEETTCEEEECTTCC
T ss_pred EEEEEEEecCCCCceeE-EecCC-CcEEEEEEeCeEEEEeC--Ccccc-eEEeccCCEEEEeCCCc
Confidence 567778877 443221 11223 56799999999998752 21010 02699999999999943
No 226
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=95.99 E-value=0.051 Score=46.95 Aligned_cols=70 Identities=7% Similarity=0.014 Sum_probs=53.4
Q ss_pred cCCCeecccccc---cCCeeEEEEEeceEEEEEEccCCc-----eEEEEEecC--CcEEEEcCCcEEEEeeCCCCeEEEE
Q 018395 231 DGKAMCSPGFSC---DSALQVTYIVRGSGRAQIVGPDGK-----RVLETTVKA--GNLFIVPRFYVVSKIADPDGLAWFS 300 (356)
Q Consensus 231 ~~g~~~~PH~h~---~~A~ei~~v~~G~~~~~iv~~~g~-----~~~~~~l~~--Gdv~vvP~g~~h~~~~~~~~~~~~~ 300 (356)
.+|.++-.|+|. . -.++++|++|++..-+||-.-. +.....|.+ +..++||.|++|-..+-+++++++-
T Consensus 55 ~~GvlRGlH~q~~p~~-q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y 133 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENA-QGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLY 133 (183)
T ss_dssp ETTBEEEEEEECGGGC-CCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEE
T ss_pred CCCeeeeeEccCCCCC-CcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEE
Confidence 379999999995 3 5799999999998777776421 234556665 6899999999999987666665554
Q ss_pred E
Q 018395 301 I 301 (356)
Q Consensus 301 ~ 301 (356)
.
T Consensus 134 ~ 134 (183)
T 1dzr_A 134 K 134 (183)
T ss_dssp E
T ss_pred E
Confidence 4
No 227
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=95.98 E-value=0.064 Score=46.91 Aligned_cols=70 Identities=16% Similarity=0.288 Sum_probs=55.2
Q ss_pred cCCCcccCeeeC----CCEEEEEEeCeEEEEEEcCC------CceEEEEEcC--CCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 45 EKNGFALPHYCD----SARVAYVLQGSGVAGIVLPE------KEEKVVAIKK--GDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 45 ~Pg~~~~pH~h~----a~e~~yVl~G~~~~~vv~~~------~~~~~~~l~~--GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
.+|.++.+|+|. ...+++|++|+..--+|+-- ++.....|.+ +..++||+|..|-..+.+++ ..+++
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~-a~~~Y 130 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD-ATLVF 130 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC-eEEEE
Confidence 689999999993 68999999999877777732 3344567765 89999999999999998776 55655
Q ss_pred Eee
Q 018395 113 LGD 115 (356)
Q Consensus 113 i~~ 115 (356)
..+
T Consensus 131 ~~t 133 (201)
T 4hn1_A 131 LCS 133 (201)
T ss_dssp EES
T ss_pred eCC
Confidence 443
No 228
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=95.97 E-value=0.014 Score=55.71 Aligned_cols=64 Identities=13% Similarity=0.145 Sum_probs=50.2
Q ss_pred EEec-CCCcccCeeeCCCEEEEEEeCeEEEEEEcCCC-----------------------------------ceEEEEEc
Q 018395 42 LALE-KNGFALPHYCDSARVAYVLQGSGVAGIVLPEK-----------------------------------EEKVVAIK 85 (356)
Q Consensus 42 ~~l~-Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~-----------------------------------~~~~~~l~ 85 (356)
+-+. +|+...+|+-..+-+..++.|+=++.+..|.. ......|+
T Consensus 187 l~iG~~gs~t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~ 266 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVG 266 (349)
T ss_dssp EEEECTTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEEC
T ss_pred EEEECCCCCccceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEEC
Confidence 4555 55666788775578889999999988876531 12468999
Q ss_pred CCCEEEeCCCcEEEEEecCC
Q 018395 86 KGDGIALPFGVVTWWYNKED 105 (356)
Q Consensus 86 ~GDv~~iP~G~~H~~~N~g~ 105 (356)
+||+++||+|+.|++.|.++
T Consensus 267 pGD~LyiP~gWwH~V~~l~d 286 (349)
T 3d8c_A 267 PGDVLYIPMYWWHHIESLLN 286 (349)
T ss_dssp TTCEEEECTTCEEEEEECTT
T ss_pred CCCEEEECCCCcEEEEEcCC
Confidence 99999999999999999863
No 229
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=95.91 E-value=0.025 Score=51.30 Aligned_cols=71 Identities=6% Similarity=0.120 Sum_probs=48.8
Q ss_pred eEEEEecCCCe--ecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeC---CCCeEEE
Q 018395 225 ADLVRLDGKAM--CSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIAD---PDGLAWF 299 (356)
Q Consensus 225 ~~~v~l~~g~~--~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~---~~~~~~~ 299 (356)
+....|....- +.+|||. -.|++||++|++. .++..+.. ...+++||++++|+|.+|..... +++.+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~--~~~i~~v~~G~~~--~i~~~~~~--~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~~ 82 (276)
T 3gbg_A 9 TNVYRMSKFDTYIFNNLYIN--DYKMFWIDSGIAK--LIDKNCLV--SYEINSSSIILLKKNSIQRFSLTSLSDENINVS 82 (276)
T ss_dssp EEEEEECTTCEEEEEEEECS--SCEEEEESSSCEE--EEETTTTE--EEEECTTEEEEECTTCEEEEEEEECCSSCEEEE
T ss_pred hhhhhhhcccchhccHhhhc--ceEEEEEecCceE--EECCccce--eEEEcCCCEEEEcCCCceeeccccCCCcceEEE
Confidence 44455555443 4789984 6899999999999 45532211 25799999999999999998433 2455544
Q ss_pred EE
Q 018395 300 SI 301 (356)
Q Consensus 300 ~~ 301 (356)
.+
T Consensus 83 ~i 84 (276)
T 3gbg_A 83 VI 84 (276)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 230
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.87 E-value=0.054 Score=53.65 Aligned_cols=75 Identities=19% Similarity=0.235 Sum_probs=54.3
Q ss_pred EEEecCCCcc--cCeeeCCCEEEEEEeCeEEEEEEcCCCc--------------------eEEEEEcCCCEEEeCCCcEE
Q 018395 41 KLALEKNGFA--LPHYCDSARVAYVLQGSGVAGIVLPEKE--------------------EKVVAIKKGDGIALPFGVVT 98 (356)
Q Consensus 41 ~~~l~Pg~~~--~pH~h~a~e~~yVl~G~~~~~vv~~~~~--------------------~~~~~l~~GDv~~iP~G~~H 98 (356)
.+-+.|++.. .|||-..+-++.-+.|+=+..+..+... .....|++||++|+|+|+.|
T Consensus 167 N~Y~tp~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H 246 (489)
T 4diq_A 167 NVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIH 246 (489)
T ss_dssp EEEEECSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEE
T ss_pred eEEecCCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCce
Confidence 3556666644 5888777777778888888888765421 13579999999999999999
Q ss_pred EEEecCCCcEEEEEEee
Q 018395 99 WWYNKEDTELVVLFLGD 115 (356)
Q Consensus 99 ~~~N~g~e~l~~l~i~~ 115 (356)
+..+.+++.-.-+.+..
T Consensus 247 ~~~s~~~~~SlhlTi~~ 263 (489)
T 4diq_A 247 QAECQDGVHSLHLTLST 263 (489)
T ss_dssp EEEBCSSCCEEEEEEEE
T ss_pred EEEecCCCceEEEeecc
Confidence 99998665444444443
No 231
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=95.83 E-value=0.075 Score=46.66 Aligned_cols=71 Identities=11% Similarity=0.054 Sum_probs=54.2
Q ss_pred cCCCeecccccc--cCCeeEEEEEeceEEEEEEccCC-----ceEEEEEecC--CcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 231 DGKAMCSPGFSC--DSALQVTYIVRGSGRAQIVGPDG-----KRVLETTVKA--GNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 231 ~~g~~~~PH~h~--~~A~ei~~v~~G~~~~~iv~~~g-----~~~~~~~l~~--Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
.+|.++..|+|. ..-.++++|++|++..-+||-.- .+.....|.+ +..++||+|++|-..+-+++++++-.
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y~ 157 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTIVMYK 157 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSSEEEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCCEEEEEE
Confidence 589999999994 11469999999999888887531 1334557775 79999999999999776666666543
No 232
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=95.75 E-value=0.074 Score=46.39 Aligned_cols=72 Identities=8% Similarity=0.114 Sum_probs=54.3
Q ss_pred cCCCeecccccc--cCCeeEEEEEeceEEEEEEccCCc-----eEEEEEecC--CcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 231 DGKAMCSPGFSC--DSALQVTYIVRGSGRAQIVGPDGK-----RVLETTVKA--GNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 231 ~~g~~~~PH~h~--~~A~ei~~v~~G~~~~~iv~~~g~-----~~~~~~l~~--Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
.+|.++-.|||. .+-.++++|++|++..-+||-.-. +.....|.+ +..++||+|++|-..+-+++++++-.
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~a~~ly~ 152 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDSIVIYFI 152 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSEEEEEEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEE
Confidence 589999999994 213699999999998777876421 234557775 79999999999999886667666554
Q ss_pred E
Q 018395 302 I 302 (356)
Q Consensus 302 ~ 302 (356)
.
T Consensus 153 ~ 153 (196)
T 1wlt_A 153 T 153 (196)
T ss_dssp E
T ss_pred e
Confidence 3
No 233
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=95.72 E-value=1.3 Score=40.95 Aligned_cols=73 Identities=16% Similarity=-0.017 Sum_probs=56.8
Q ss_pred EEEEEecCCCcccCeee-CCCEEEEEE-eCeEEEEEEcCCCceEEEEEcCCCEEEeCCC--cEEEEEecCCCcEEEEEEe
Q 018395 39 AAKLALEKNGFALPHYC-DSARVAYVL-QGSGVAGIVLPEKEEKVVAIKKGDGIALPFG--VVTWWYNKEDTELVVLFLG 114 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h-~a~e~~yVl-~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G--~~H~~~N~g~e~l~~l~i~ 114 (356)
+....+.|+.-+.+|-| +-+-+-||+ +|+..-. +.-|.. ..+++||+-.+=+| +.|.-.|..+++++.+-+.
T Consensus 42 ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~--DS~Gn~--~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlW 117 (290)
T 1j1l_A 42 FDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHE--DFCGHT--GKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLW 117 (290)
T ss_dssp EEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEE--ETTSCE--EEECTTCEEEEECTTCEEEEEEECSSSCEEEEEEE
T ss_pred EEccccCCCCCCCCCCCCCeEEEEEECcceEEEEe--eCCCCc--eEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEEE
Confidence 45557888887899999 555588999 9998775 544433 68999999999887 6799999766677777766
Q ss_pred e
Q 018395 115 D 115 (356)
Q Consensus 115 ~ 115 (356)
.
T Consensus 118 v 118 (290)
T 1j1l_A 118 V 118 (290)
T ss_dssp E
T ss_pred e
Confidence 5
No 234
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.70 E-value=0.041 Score=52.14 Aligned_cols=72 Identities=15% Similarity=0.262 Sum_probs=52.8
Q ss_pred EEEEecC-CCeecccccccCCeeEEEEEeceEEEEEEccCC-----------------------------ceEEEEEecC
Q 018395 226 DLVRLDG-KAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDG-----------------------------KRVLETTVKA 275 (356)
Q Consensus 226 ~~v~l~~-g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g-----------------------------~~~~~~~l~~ 275 (356)
..+.+.+ |+...+|+.+. +-+..++.|+=++.++.|.- .+.++..|++
T Consensus 169 s~l~~g~~g~~~~~H~D~~--~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~p 246 (338)
T 3al5_A 169 SVFRISSPGLQLWTHYDVM--DNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEA 246 (338)
T ss_dssp EEEEEECTTCEEEEECCSS--EEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECT
T ss_pred ceeEECCCCCCccceECCc--ccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECC
Confidence 3455655 45556788764 56888999999999998731 0256789999
Q ss_pred CcEEEEcCCcEEEEeeCCCCeEEEE
Q 018395 276 GNLFIVPRFYVVSKIADPDGLAWFS 300 (356)
Q Consensus 276 Gdv~vvP~g~~h~~~~~~~~~~~~~ 300 (356)
||+++||+||+|+..+-+. ..-+.
T Consensus 247 GD~LyiP~gWwH~v~~l~~-sisvn 270 (338)
T 3al5_A 247 GDVLFIPALWFHNVISEEF-GVGVN 270 (338)
T ss_dssp TCEEEECTTCEEEEEESSC-EEEEE
T ss_pred CCEEEECCCCeEEEeeCCC-EEEEE
Confidence 9999999999999977543 34444
No 235
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=95.58 E-value=0.26 Score=43.56 Aligned_cols=129 Identities=14% Similarity=0.159 Sum_probs=79.7
Q ss_pred CCCeEEEEeCCCCCC-----CcccCceEEEEEEecCCCcccCeee--CCCEEEEEEeCe-EEEEEEcCCC----------
Q 018395 16 GNGGSYHAWCPNELP-----MLRQGNIGAAKLALEKNGFALPHYC--DSARVAYVLQGS-GVAGIVLPEK---------- 77 (356)
Q Consensus 16 ~~~G~i~~~~~~~~p-----~l~~~~~~~~~~~l~Pg~~~~pH~h--~a~e~~yVl~G~-~~~~vv~~~~---------- 77 (356)
.+||++++....... .-...-.+..+.-|.+|.. -||| +++|+.+...|. .++.++.+++
T Consensus 34 PEGG~yrEt~Rs~~~v~~~~~~~R~~~TaIYfLL~~g~~--S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~ 111 (225)
T 3m3i_A 34 PEGGYYSEVVRSAHKVDNEEGNRRHAYTTIYFLCTPESP--SHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQP 111 (225)
T ss_dssp TTSSEEEEEEECSSEEECTTSCEEESCEEEEEEECSSSC--EEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC-----
T ss_pred CCCceEEEEEECCCcccCCCCCCcccceeEEEEecCCCC--cccEEecCCEEEEEECCCCEEEEEEcCCCcccccccccc
Confidence 389999764432210 0112335677888999985 5666 899999999998 5677777766
Q ss_pred ------------------ceEEEEE----cCCC--EEEeCCCcEEEEEecCCC-----cEEEEEEeeCCCCCCCC-ceeE
Q 018395 78 ------------------EEKVVAI----KKGD--GIALPFGVVTWWYNKEDT-----ELVVLFLGDTSKGHKAG-EFTN 127 (356)
Q Consensus 78 ------------------~~~~~~l----~~GD--v~~iP~G~~H~~~N~g~e-----~l~~l~i~~~~~~~~pg-~~~~ 127 (356)
......| .+|+ .++||+|+.....-.+++ ...++.... .|| +|.+
T Consensus 112 ~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCtV-----aPGFdF~D 186 (225)
T 3m3i_A 112 PAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCIV-----SPGFDYRD 186 (225)
T ss_dssp -------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEEE-----ESCCCGGG
T ss_pred cccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEEE-----cCCccchh
Confidence 2233444 4566 578999998877755432 334443322 244 2444
Q ss_pred EeecccccccccCcHHHHHhhccCCHHHHHHhh
Q 018395 128 FFLTGANGIFTGFSTEFVSRAWDLDENTVKTLV 160 (356)
Q Consensus 128 f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~ 160 (356)
|-+ ++.+-|.+-|.--++.|++|-
T Consensus 187 Fel---------~~~~~L~~~~P~~~~~I~~lt 210 (225)
T 3m3i_A 187 FEI---------FTQAQLMELYPQHEAVIKQMA 210 (225)
T ss_dssp CEE---------CBHHHHHHHCGGGHHHHHHHS
T ss_pred cEe---------cCHHHHHHHCchHHHHHHHhc
Confidence 433 456666667766667777774
No 236
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=95.55 E-value=0.11 Score=45.54 Aligned_cols=71 Identities=8% Similarity=0.011 Sum_probs=53.5
Q ss_pred cCCCeecccccc--cCCeeEEEEEeceEEEEEEccCCc-----eEEEEEecC--CcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 231 DGKAMCSPGFSC--DSALQVTYIVRGSGRAQIVGPDGK-----RVLETTVKA--GNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 231 ~~g~~~~PH~h~--~~A~ei~~v~~G~~~~~iv~~~g~-----~~~~~~l~~--Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
.+|.++-.|+|. .+-.++++|++|++..-+||-.-. +.....|.+ +..++||.|++|-..+-+++++++-.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~ 134 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMSYM 134 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTTEEEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCCeEEEEe
Confidence 589999999994 213699999999998888886421 234557776 58999999999999876666655544
No 237
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=95.47 E-value=0.43 Score=40.56 Aligned_cols=125 Identities=10% Similarity=0.078 Sum_probs=79.1
Q ss_pred CeEEEEeCCCC-------CCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCe-EEEEEEcCCCceEEEEE----c
Q 018395 18 GGSYHAWCPNE-------LPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGS-GVAGIVLPEKEEKVVAI----K 85 (356)
Q Consensus 18 ~G~i~~~~~~~-------~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~-~~~~vv~~~~~~~~~~l----~ 85 (356)
||++++..... ...- ....+..+.-|.+|.....|-.+++|+.+-..|. .++.++.+++......| .
T Consensus 28 GG~yrEt~rs~~~v~~~~~~~~-R~~~TaIYfLL~~~~~S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~ 106 (172)
T 3loi_A 28 GGWFRETYRSDVQVEAEGFDGK-RSVLTMIYYLMQAGQPDPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLE 106 (172)
T ss_dssp SSEEEEEEECSCEECCTTSSSC-EESCEEEEEEEETTCCEEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTT
T ss_pred CCeEEEEEECcCcccCCCCCCC-cccceEEEEEEcCCCCccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcc
Confidence 89987643221 1111 2335677888999884434433899999999997 58888888876555555 4
Q ss_pred CCC---EEEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCC-ceeEEeecccccccccCcHHHHHhhccCCHHHHHHhh
Q 018395 86 KGD---GIALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAG-EFTNFFLTGANGIFTGFSTEFVSRAWDLDENTVKTLV 160 (356)
Q Consensus 86 ~GD---v~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg-~~~~f~lag~~s~l~~~~~~vl~~af~~~~~~~~~l~ 160 (356)
+|+ .++||+|+...... + ...++.... .|| +|.+|-+ .+++-|.+.|.--++.|++|-
T Consensus 107 ~Ge~~pQ~vVP~G~WqaA~~-~--~~~LVsctV-----aPGF~f~dfel---------~~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 107 HPEARHQVVVPRRVWFAQEV-D--GYCLASVLV-----APGFDFKDFSL---------GKREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp STTCBSEEEECTTCEEEEEE-S--SEEEEEEEE-----ESCCCGGGCEE---------CCHHHHHHHCGGGHHHHHHTS
T ss_pred cCCcceEEEECCCEEEEEEe-C--CcEEEEEEE-----cCCccchhcEE---------cCHHHHHHHCchHHHHHHHhc
Confidence 677 78999999877766 2 244443322 244 2444443 456666666665666677664
No 238
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=95.45 E-value=0.13 Score=44.98 Aligned_cols=72 Identities=13% Similarity=0.048 Sum_probs=55.2
Q ss_pred cCCCeecccccc--cCCeeEEEEEeceEEEEEEccCCc-----eEEEEEecC--CcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 231 DGKAMCSPGFSC--DSALQVTYIVRGSGRAQIVGPDGK-----RVLETTVKA--GNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 231 ~~g~~~~PH~h~--~~A~ei~~v~~G~~~~~iv~~~g~-----~~~~~~l~~--Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
.+|.++..|+|. ..-.++++|++|++.--+||-.-. +.....|.+ +..++||+|++|-..+-+++++++-.
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y~ 131 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVFL 131 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEEe
Confidence 689999999985 115799999999999889986421 233446665 78999999999999887677766544
Q ss_pred E
Q 018395 302 I 302 (356)
Q Consensus 302 ~ 302 (356)
.
T Consensus 132 ~ 132 (201)
T 4hn1_A 132 C 132 (201)
T ss_dssp E
T ss_pred C
Confidence 3
No 239
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=95.39 E-value=0.087 Score=49.88 Aligned_cols=68 Identities=13% Similarity=0.043 Sum_probs=52.6
Q ss_pred EEEecC-CCeecccccccCCeeEEEEEeceEEEEEEccCC--------------------------------------ce
Q 018395 227 LVRLDG-KAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDG--------------------------------------KR 267 (356)
Q Consensus 227 ~v~l~~-g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g--------------------------------------~~ 267 (356)
.+-+.+ |+....|+.+...+-+..++.|+=++.++.|.- .+
T Consensus 175 ~~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~ 254 (336)
T 3k2o_A 175 WFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFK 254 (336)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGC
T ss_pred EEEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCc
Confidence 345555 566789999873357999999999999998741 02
Q ss_pred EEEEEecCCcEEEEcCCcEEEEeeCCC
Q 018395 268 VLETTVKAGNLFIVPRFYVVSKIADPD 294 (356)
Q Consensus 268 ~~~~~l~~Gdv~vvP~g~~h~~~~~~~ 294 (356)
.+...|++||+++||.|++|+..+.++
T Consensus 255 ~~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 255 PLEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSC
T ss_pred eEEEEECCCCEEEeCCCCcEEEecCCC
Confidence 256789999999999999999876554
No 240
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.38 E-value=0.024 Score=53.73 Aligned_cols=65 Identities=12% Similarity=0.083 Sum_probs=49.0
Q ss_pred EEEecC-CCcccCeeeCCCEEEEEEeCeEEEEEEcCCC------------------------------ceEEEEEcCCCE
Q 018395 41 KLALEK-NGFALPHYCDSARVAYVLQGSGVAGIVLPEK------------------------------EEKVVAIKKGDG 89 (356)
Q Consensus 41 ~~~l~P-g~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~------------------------------~~~~~~l~~GDv 89 (356)
.+-+.| |+...+|+-..+-++.++.|+=++.+..|.. ......|++||+
T Consensus 170 ~l~~g~~g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~ 249 (338)
T 3al5_A 170 VFRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDV 249 (338)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCE
T ss_pred eeEECCCCCCccceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCE
Confidence 344444 5556677765667888899999988876521 134688999999
Q ss_pred EEeCCCcEEEEEecCC
Q 018395 90 IALPFGVVTWWYNKED 105 (356)
Q Consensus 90 ~~iP~G~~H~~~N~g~ 105 (356)
+|||+|+.|+..|.+.
T Consensus 250 LyiP~gWwH~v~~l~~ 265 (338)
T 3al5_A 250 LFIPALWFHNVISEEF 265 (338)
T ss_dssp EEECTTCEEEEEESSC
T ss_pred EEECCCCeEEEeeCCC
Confidence 9999999999999853
No 241
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=95.07 E-value=0.074 Score=52.31 Aligned_cols=64 Identities=13% Similarity=0.138 Sum_probs=51.8
Q ss_pred cCCCeecccccccCCeeEEEEEeceEEEEEEccCC------------------------ceEEEEEecCCcEEEEcCCcE
Q 018395 231 DGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDG------------------------KRVLETTVKAGNLFIVPRFYV 286 (356)
Q Consensus 231 ~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g------------------------~~~~~~~l~~Gdv~vvP~g~~ 286 (356)
.+|+....|+.+.+++-|..++.|+=++-++.|.- .+.+...+++||+++||.||+
T Consensus 204 p~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGWw 283 (451)
T 2yu1_A 204 VRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGWI 283 (451)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTCE
T ss_pred cCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCce
Confidence 44777788999885567899999999999998852 124567899999999999999
Q ss_pred EEEeeCCC
Q 018395 287 VSKIADPD 294 (356)
Q Consensus 287 h~~~~~~~ 294 (356)
|+..+.++
T Consensus 284 H~V~nled 291 (451)
T 2yu1_A 284 HAVYTPTD 291 (451)
T ss_dssp EEEECSSC
T ss_pred EEEecCCC
Confidence 99976544
No 242
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=95.05 E-value=0.56 Score=39.85 Aligned_cols=109 Identities=16% Similarity=0.129 Sum_probs=74.2
Q ss_pred ceeEEEEecCCCeecccccccCCeeEEEEEece-EEEEEEccCCceEEEE----EecCCc---EEEEcCCcEEEEeeCCC
Q 018395 223 CGADLVRLDGKAMCSPGFSCDSALQVTYIVRGS-GRAQIVGPDGKRVLET----TVKAGN---LFIVPRFYVVSKIADPD 294 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~-~~~~iv~~~g~~~~~~----~l~~Gd---v~vvP~g~~h~~~~~~~ 294 (356)
.+.-..-|.+|... |||...+.|+-+-..|. .++-++.++|.- -.. ++..|+ .++||+|.+..-.. .
T Consensus 53 ~TaIYfLL~~~~~S--~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~-~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~--~ 127 (172)
T 3loi_A 53 LTMIYYLMQAGQPD--PFHRVKSDETFVHNLGGSMKIHMIHPDGSY-SCSILGNPLEHPEARHQVVVPRRVWFAQEV--D 127 (172)
T ss_dssp CEEEEEEEETTCCE--EEEECSSEEEEEEEEESCEEEEEECTTSCE-EEEEESCTTTSTTCBSEEEECTTCEEEEEE--S
T ss_pred ceEEEEEEcCCCCc--cCEEecCCEEEEEEcCCCEEEEEEcCCCce-EEEEeCCCcccCCcceEEEECCCEEEEEEe--C
Confidence 34555667888754 88876699999999995 589999999853 122 456788 78999999876544 5
Q ss_pred CeEEEEEEcCCCCceeccccccccccCCCHHHHHHHcCCCHHHHHHHHh
Q 018395 295 GLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRS 343 (356)
Q Consensus 295 ~~~~~~~~~~~~p~~~~laG~~s~l~~~p~~vl~~af~~~~~~~~~l~~ 343 (356)
+..+++..-+ |++.|- =+.-.+.+-|.+.|.--++.+++|-.
T Consensus 128 ~~~LVsctVa--PGF~f~-----dfel~~~~~L~~~~P~~~~~I~~lt~ 169 (172)
T 3loi_A 128 GYCLASVLVA--PGFDFK-----DFSLGKREELIKEYPQHRDVIMRCTS 169 (172)
T ss_dssp SEEEEEEEEE--SCCCGG-----GCEECCHHHHHHHCGGGHHHHHHTSC
T ss_pred CcEEEEEEEc--CCccch-----hcEEcCHHHHHHHCchHHHHHHHhcc
Confidence 5666655433 333321 12224778888888777788888754
No 243
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=94.99 E-value=0.21 Score=44.47 Aligned_cols=71 Identities=14% Similarity=0.012 Sum_probs=52.7
Q ss_pred cCCCeecccccc--cCCeeEEEEEeceEEEEEEccCCc-----eEEEEEecC--CcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 231 DGKAMCSPGFSC--DSALQVTYIVRGSGRAQIVGPDGK-----RVLETTVKA--GNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 231 ~~g~~~~PH~h~--~~A~ei~~v~~G~~~~~iv~~~g~-----~~~~~~l~~--Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
.+|-++-.|+|. .+-.++++|++|++..-+||-.-. +.....|.+ +..++||.|++|-..+-+++++++-.
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~vly~ 153 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYL 153 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSEEEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCCEEEEEe
Confidence 589999999994 112699999999998777875411 234556765 58999999999999876666655543
No 244
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=94.96 E-value=0.28 Score=42.86 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=48.3
Q ss_pred eEEEEEEecCCC-cccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEc----CCC--EEEeCCCcEEEEEec
Q 018395 37 IGAAKLALEKNG-FALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIK----KGD--GIALPFGVVTWWYNK 103 (356)
Q Consensus 37 ~~~~~~~l~Pg~-~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~----~GD--v~~iP~G~~H~~~N~ 103 (356)
.+..+.-|.++. ....|-.+++|+.+-..|....-++.+++...+..|. .|+ -++||+|+.......
T Consensus 79 ~TaIYfLL~~~~~~S~wHRv~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~ 152 (203)
T 1xe7_A 79 STLIYYLLTPDSPIGKFHKNINRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLL 152 (203)
T ss_dssp CEEEEEEEBTTBCEEEEEEESSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEEC
T ss_pred eeEEEEEEcCCCCcccceeeCCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEec
Confidence 466677788876 4444444999999999998777677777765545553 355 489999998877654
No 245
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=94.96 E-value=0.42 Score=42.58 Aligned_cols=83 Identities=10% Similarity=0.151 Sum_probs=61.6
Q ss_pred CceEEEEEEecCCCcccCeee-CCCEEEEEEeC-eEEEEEEcCC---------------CceE------EEEEcCCCEEE
Q 018395 35 GNIGAAKLALEKNGFALPHYC-DSARVAYVLQG-SGVAGIVLPE---------------KEEK------VVAIKKGDGIA 91 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G-~~~~~vv~~~---------------~~~~------~~~l~~GDv~~ 91 (356)
..+.-..+.+.||...+.|+| .-.|-+++--| +..+.+...+ |..+ ...|+||+.+-
T Consensus 104 k~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiT 183 (246)
T 3kmh_A 104 KCYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESIC 183 (246)
T ss_dssp CCEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEE
T ss_pred CcceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEe
Confidence 368888999999999999999 88888888887 5555554432 1111 24899999999
Q ss_pred eCCCcEEEEEecCC-CcEEEEEEeeCC
Q 018395 92 LPFGVVTWWYNKED-TELVVLFLGDTS 117 (356)
Q Consensus 92 iP~G~~H~~~N~g~-e~l~~l~i~~~~ 117 (356)
+|+|..||++..+. .++.+--+...+
T Consensus 184 l~Pg~~H~F~ae~g~G~vligEVSt~N 210 (246)
T 3kmh_A 184 LPPGLYHSFWAEAGFGDVLVGEVSSVN 210 (246)
T ss_dssp ECTTEEEEEEECTTSCCEEEEEEEECC
T ss_pred cCCCCEEEEEecCCCccEEEEEcccCc
Confidence 99999999998665 245555555443
No 246
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=94.89 E-value=0.18 Score=44.54 Aligned_cols=71 Identities=11% Similarity=-0.106 Sum_probs=52.5
Q ss_pred cCCCeeccccccc--CCeeEEEEEeceEEEEEEccCCc-----eEEEEEecC--CcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 231 DGKAMCSPGFSCD--SALQVTYIVRGSGRAQIVGPDGK-----RVLETTVKA--GNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 231 ~~g~~~~PH~h~~--~A~ei~~v~~G~~~~~iv~~~g~-----~~~~~~l~~--Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
.+|-++-.|+|.. +-.++++|++|++..-+||-.-. +.....|.+ +..++||.|++|-..+-+++++++-.
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~~ly~ 142 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDEATLCYL 142 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCCeEEEEe
Confidence 4799999999951 12699999999998777776421 234556766 47999999999999876666655543
No 247
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=94.85 E-value=0.058 Score=53.67 Aligned_cols=65 Identities=11% Similarity=0.173 Sum_probs=52.5
Q ss_pred EEe-cCCCeecccccccCCeeEEEEEeceEEEEEEccCC------------------------ceEEEEEecCCcEEEEc
Q 018395 228 VRL-DGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDG------------------------KRVLETTVKAGNLFIVP 282 (356)
Q Consensus 228 v~l-~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g------------------------~~~~~~~l~~Gdv~vvP 282 (356)
+-+ .+|+....|+.+.+.+-|..++.|+=++-++.|.- .+.+...+++||+++||
T Consensus 270 ~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIP 349 (488)
T 3kv5_D 270 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 349 (488)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeC
Confidence 444 45777889999985667889999999999998831 13456789999999999
Q ss_pred CCcEEEEeeC
Q 018395 283 RFYVVSKIAD 292 (356)
Q Consensus 283 ~g~~h~~~~~ 292 (356)
.||+|+..+-
T Consensus 350 sGWwH~V~nl 359 (488)
T 3kv5_D 350 TGWIHAVLTS 359 (488)
T ss_dssp TTCEEEEEEE
T ss_pred CCceEEeeCC
Confidence 9999999664
No 248
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=94.84 E-value=0.035 Score=53.17 Aligned_cols=67 Identities=10% Similarity=0.203 Sum_probs=52.6
Q ss_pred EEe-cCCCeecccccccCCeeEEEEEeceEEEEEEccCC------------------------ceEEEEEecCCcEEEEc
Q 018395 228 VRL-DGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDG------------------------KRVLETTVKAGNLFIVP 282 (356)
Q Consensus 228 v~l-~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g------------------------~~~~~~~l~~Gdv~vvP 282 (356)
+-+ .+|+....|+.+.+++-|..+++|+=++-++.|.- .+.+...+++||+++||
T Consensus 151 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIP 230 (371)
T 3k3o_A 151 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIP 230 (371)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeC
Confidence 344 45777789999985566889999999999987741 13456799999999999
Q ss_pred CCcEEEEeeCCC
Q 018395 283 RFYVVSKIADPD 294 (356)
Q Consensus 283 ~g~~h~~~~~~~ 294 (356)
.||+|+..+.++
T Consensus 231 sGWwH~V~nled 242 (371)
T 3k3o_A 231 TGWIHAVLTPVD 242 (371)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCCeEEEecCCC
Confidence 999999966433
No 249
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.83 E-value=0.09 Score=51.61 Aligned_cols=67 Identities=10% Similarity=0.220 Sum_probs=53.4
Q ss_pred EEec-CCCeecccccccCCeeEEEEEeceEEEEEEccCC------------------------ceEEEEEecCCcEEEEc
Q 018395 228 VRLD-GKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDG------------------------KRVLETTVKAGNLFIVP 282 (356)
Q Consensus 228 v~l~-~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g------------------------~~~~~~~l~~Gdv~vvP 282 (356)
+-+. +|+....|..+.+++-|..+++|+=++-++.|.- .+.+...+++||+++||
T Consensus 235 ~~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIP 314 (447)
T 3kv4_A 235 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIP 314 (447)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecC
Confidence 4444 4677789999886678899999999999998851 12356789999999999
Q ss_pred CCcEEEEeeCCC
Q 018395 283 RFYVVSKIADPD 294 (356)
Q Consensus 283 ~g~~h~~~~~~~ 294 (356)
.||+|+..+..+
T Consensus 315 sGWwH~V~nled 326 (447)
T 3kv4_A 315 TGWIHAVLTPVD 326 (447)
T ss_dssp TTCEEEEEESSC
T ss_pred CCCeEEEecCCC
Confidence 999999976544
No 250
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=94.75 E-value=2 Score=39.33 Aligned_cols=76 Identities=9% Similarity=0.102 Sum_probs=47.8
Q ss_pred ceeEEEEecCCCee---cccccccCCeeEEEEEe----ceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCC
Q 018395 223 CGADLVRLDGKAMC---SPGFSCDSALQVTYIVR----GSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDG 295 (356)
Q Consensus 223 ~s~~~v~l~~g~~~---~PH~h~~~A~ei~~v~~----G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~ 295 (356)
+-+..-.|+|||.. +||-|-+ -.|..|--+ |. -++++.+.. ....-.++-||++++|..++|. -.|.++
T Consensus 180 llmg~evltpgg~WSSyPpHkHDr-r~EeyyYF~l~~~gf-v~q~~g~p~-Etrhi~V~n~daVlvP~wh~h~-~~G~~~ 255 (282)
T 1xru_A 180 LSMGLTELAPGNLWNTMPCHTHER-RMEVYFYFNMDDDAC-VFHMMGQPQ-ETRHIVMHNEQAVISPSWSIHS-GVGTKA 255 (282)
T ss_dssp CEEEEEEECTTCCEESCSEEECTT-EEEEEEEESCCTTCC-EEEEEEETT-EEEEEEECSSEEEEECTTCEEE-EEESSC
T ss_pred EEEEEEEEeCCCCcCCCCCccCCC-CceEEEEEEeCCCCE-EEEEeCCCC-CeeEEEEECCCEEEeCCCCCCC-CCCccc
Confidence 44666778888754 8999987 777777665 33 344444332 2112268999999999556555 336655
Q ss_pred eEEEEEE
Q 018395 296 LAWFSII 302 (356)
Q Consensus 296 ~~~~~~~ 302 (356)
.-|+-+.
T Consensus 256 Y~ylwvM 262 (282)
T 1xru_A 256 YTFIWGM 262 (282)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 4444443
No 251
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=94.59 E-value=0.14 Score=41.28 Aligned_cols=64 Identities=16% Similarity=0.020 Sum_probs=49.3
Q ss_pred CCCcccCe---e-e-CCCEEEEEEeCeEEEEEEcCCCc---eEEEEEcCCCEEEeCCCcEEEEEecCCCcEEE
Q 018395 46 KNGFALPH---Y-C-DSARVAYVLQGSGVAGIVLPEKE---EKVVAIKKGDGIALPFGVVTWWYNKEDTELVV 110 (356)
Q Consensus 46 Pg~~~~pH---~-h-~a~e~~yVl~G~~~~~vv~~~~~---~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~ 110 (356)
|.++...| . + ..-+.+.|++|+.++...++++. ++..-..+|+...+|++..|.+.-..+ +++|
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f 94 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYF 94 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEE
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEE
Confidence 66778888 4 4 45578889999999987776654 344678999999999999999997444 3444
No 252
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.56 E-value=0.07 Score=52.39 Aligned_cols=62 Identities=16% Similarity=0.226 Sum_probs=48.7
Q ss_pred cCCCcccCeee--CCCEEEEEEeCeEEEEEEcCCC-------------------------ceEEEEEcCCCEEEeCCCcE
Q 018395 45 EKNGFALPHYC--DSARVAYVLQGSGVAGIVLPEK-------------------------EEKVVAIKKGDGIALPFGVV 97 (356)
Q Consensus 45 ~Pg~~~~pH~h--~a~e~~yVl~G~~~~~vv~~~~-------------------------~~~~~~l~~GDv~~iP~G~~ 97 (356)
.+|+....|+- ...-|..|++|+=+..++.|.. +-....+++||+++||+|+.
T Consensus 239 ~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWw 318 (447)
T 3kv4_A 239 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 318 (447)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCe
Confidence 45666678876 4456788999999998887652 12357999999999999999
Q ss_pred EEEEecCCC
Q 018395 98 TWWYNKEDT 106 (356)
Q Consensus 98 H~~~N~g~e 106 (356)
|++.|..+.
T Consensus 319 H~V~nleds 327 (447)
T 3kv4_A 319 HAVLTPVDC 327 (447)
T ss_dssp EEEEESSCE
T ss_pred EEEecCCCE
Confidence 999998654
No 253
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=94.49 E-value=0.088 Score=50.82 Aligned_cols=66 Identities=11% Similarity=0.174 Sum_probs=52.6
Q ss_pred EEEecC-CCeecccccccCCeeEEEEEeceEEEEEEccCC------------------------ceEEEEEecCCcEEEE
Q 018395 227 LVRLDG-KAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDG------------------------KRVLETTVKAGNLFIV 281 (356)
Q Consensus 227 ~v~l~~-g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g------------------------~~~~~~~l~~Gdv~vv 281 (356)
.+-+.| |+....|+.+.+++-|..++.|+=++-++.|.- .+.+...+++||+++|
T Consensus 178 ~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfI 257 (397)
T 3kv9_A 178 YCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFV 257 (397)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEE
T ss_pred EEEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEe
Confidence 455555 666777999986667899999999999998841 1245678999999999
Q ss_pred cCCcEEEEeeC
Q 018395 282 PRFYVVSKIAD 292 (356)
Q Consensus 282 P~g~~h~~~~~ 292 (356)
|.||+|+..+-
T Consensus 258 PsGW~H~V~nl 268 (397)
T 3kv9_A 258 PTGWIHAVLTS 268 (397)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCCeEEccCC
Confidence 99999998654
No 254
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=94.44 E-value=0.049 Score=54.21 Aligned_cols=61 Identities=16% Similarity=0.212 Sum_probs=48.3
Q ss_pred cCCCcccCeee--CCCEEEEEEeCeEEEEEEcCCC-------------------------ceEEEEEcCCCEEEeCCCcE
Q 018395 45 EKNGFALPHYC--DSARVAYVLQGSGVAGIVLPEK-------------------------EEKVVAIKKGDGIALPFGVV 97 (356)
Q Consensus 45 ~Pg~~~~pH~h--~a~e~~yVl~G~~~~~vv~~~~-------------------------~~~~~~l~~GDv~~iP~G~~ 97 (356)
.+|+....|+. ...-|..++.|+=+..++.|.. +-....+++||+++||+|+.
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWw 353 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 353 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCce
Confidence 55667788887 3445778999999998887741 12357899999999999999
Q ss_pred EEEEecCC
Q 018395 98 TWWYNKED 105 (356)
Q Consensus 98 H~~~N~g~ 105 (356)
|++.|..+
T Consensus 354 H~V~nled 361 (488)
T 3kv5_D 354 HAVLTSQD 361 (488)
T ss_dssp EEEEEEEE
T ss_pred EEeeCCCC
Confidence 99999754
No 255
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=94.41 E-value=0.055 Score=52.12 Aligned_cols=64 Identities=13% Similarity=0.243 Sum_probs=52.1
Q ss_pred cCCCeecccccccCCeeEEEEEeceEEEEEEccCC------------------------ceEEEEEecCCcEEEEcCCcE
Q 018395 231 DGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDG------------------------KRVLETTVKAGNLFIVPRFYV 286 (356)
Q Consensus 231 ~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g------------------------~~~~~~~l~~Gdv~vvP~g~~ 286 (356)
..|+....|..+.+++-|..+++|+=++-++.|.- .+-+...+++||+++||.||+
T Consensus 182 p~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWw 261 (392)
T 3pua_A 182 VKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWI 261 (392)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCce
Confidence 45788889999986678999999999999988742 123567999999999999999
Q ss_pred EEEeeCCC
Q 018395 287 VSKIADPD 294 (356)
Q Consensus 287 h~~~~~~~ 294 (356)
|+..+..+
T Consensus 262 H~V~nled 269 (392)
T 3pua_A 262 YATLTPVD 269 (392)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99866433
No 256
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=94.13 E-value=0.061 Score=51.49 Aligned_cols=61 Identities=16% Similarity=0.226 Sum_probs=47.5
Q ss_pred cCCCcccCeee-CC-CEEEEEEeCeEEEEEEcCCC-------------------------ceEEEEEcCCCEEEeCCCcE
Q 018395 45 EKNGFALPHYC-DS-ARVAYVLQGSGVAGIVLPEK-------------------------EEKVVAIKKGDGIALPFGVV 97 (356)
Q Consensus 45 ~Pg~~~~pH~h-~a-~e~~yVl~G~~~~~vv~~~~-------------------------~~~~~~l~~GDv~~iP~G~~ 97 (356)
.+|+....|+. .+ .-|..+++|+=+..++.|.. +-....+++||+++||+|+.
T Consensus 155 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGWw 234 (371)
T 3k3o_A 155 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 234 (371)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCCe
Confidence 45666778887 44 45778999999998876641 12357999999999999999
Q ss_pred EEEEecCC
Q 018395 98 TWWYNKED 105 (356)
Q Consensus 98 H~~~N~g~ 105 (356)
|++.|..+
T Consensus 235 H~V~nled 242 (371)
T 3k3o_A 235 HAVLTPVD 242 (371)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999754
No 257
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=94.05 E-value=1.7 Score=36.14 Aligned_cols=108 Identities=18% Similarity=0.194 Sum_probs=70.6
Q ss_pred CCCeEEEEeCCCCCCCcccCceEEEEEEecCCCcccCeee-CCCEEEEEEeCe-EEEEEEcCCCceEEEEE----cCCCE
Q 018395 16 GNGGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGS-GVAGIVLPEKEEKVVAI----KKGDG 89 (356)
Q Consensus 16 ~~~G~i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~-~~~~vv~~~~~~~~~~l----~~GDv 89 (356)
.+||++++.-...... ...-.+..+.-|.+|.....|-. +++|+.+-..|. .++.++.+++..+...| ..|+.
T Consensus 20 PEGG~yrEt~Rs~~~~-~R~~~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge~ 98 (154)
T 1znp_A 20 PEGGFYHQTFRDKAGG-ERGHSTAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGER 98 (154)
T ss_dssp TTSSEEEEEEECSSST-TTCSCEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTEE
T ss_pred CCCccEEEEEeCCCCC-CCcceeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCcc
Confidence 3899997643322112 22345677778889887777776 899999999988 77777777765444545 45654
Q ss_pred --EEeCCCcEEEEEecCCCcEEEEEEeeCCCCCCCC-ceeEEeec
Q 018395 90 --IALPFGVVTWWYNKEDTELVVLFLGDTSKGHKAG-EFTNFFLT 131 (356)
Q Consensus 90 --~~iP~G~~H~~~N~g~e~l~~l~i~~~~~~~~pg-~~~~f~la 131 (356)
++||+|+.......+ ...++.... .|| +|++|-++
T Consensus 99 pQ~vVP~G~WqaA~~~g--~~~LVsCtV-----aPGF~f~dFel~ 136 (154)
T 1znp_A 99 PQVIVPANCWQSAESLG--DFTLVGCTV-----SPGFAFSSFVMA 136 (154)
T ss_dssp SEEEECTTCEEEEEESS--SEEEEEEEE-----SSCCCGGGEEEC
T ss_pred cEEEEcCCEEEEeeECC--CeEEEEEEe-----cCCCcccccEec
Confidence 899999988776554 344444332 255 35566664
No 258
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=93.91 E-value=0.73 Score=40.51 Aligned_cols=79 Identities=9% Similarity=-0.072 Sum_probs=61.0
Q ss_pred ceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEcc--CCceE--E-EEEecCCcEEEEcCC--cEEEE-eeC-C
Q 018395 223 CGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGP--DGKRV--L-ETTVKAGNLFIVPRF--YVVSK-IAD-P 293 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~--~g~~~--~-~~~l~~Gdv~vvP~g--~~h~~-~~~-~ 293 (356)
+++..+...||--.++|=|. ++.++.|++|+.+.++... +|... - ...+.+||+.+++.+ .+|-+ |++ +
T Consensus 73 f~v~~l~W~PGq~spiHDH~--swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 73 FSVVSFVWGPGQITPVHDHR--VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp CEEEEEEECTTCBCCSBCCS--SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred EEEEEEEECCCCcCCCCCCC--eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 66888899999999999996 6899999999999888653 33211 0 247999999999976 89999 554 5
Q ss_pred CCeEEEEEEc
Q 018395 294 DGLAWFSIIT 303 (356)
Q Consensus 294 ~~~~~~~~~~ 303 (356)
+.+.-|=++.
T Consensus 151 ~~avSLHvYg 160 (211)
T 3uss_A 151 RTSISIHVYG 160 (211)
T ss_dssp SCEEEEEEES
T ss_pred CCEEEEEEcC
Confidence 6666665553
No 259
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=93.87 E-value=0.079 Score=51.02 Aligned_cols=62 Identities=18% Similarity=0.182 Sum_probs=48.5
Q ss_pred ecCCCcccCeee--CCCEEEEEEeCeEEEEEEcCCC-------------------------ceEEEEEcCCCEEEeCCCc
Q 018395 44 LEKNGFALPHYC--DSARVAYVLQGSGVAGIVLPEK-------------------------EEKVVAIKKGDGIALPFGV 96 (356)
Q Consensus 44 l~Pg~~~~pH~h--~a~e~~yVl~G~~~~~vv~~~~-------------------------~~~~~~l~~GDv~~iP~G~ 96 (356)
=..|+....|+- ...-|..|++|+=+.-++.|.. +-....+++||++++|+|+
T Consensus 181 Gp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGW 260 (392)
T 3pua_A 181 CVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGW 260 (392)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTC
T ss_pred eCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCc
Confidence 355667778876 4456888999999998877642 1135799999999999999
Q ss_pred EEEEEecCC
Q 018395 97 VTWWYNKED 105 (356)
Q Consensus 97 ~H~~~N~g~ 105 (356)
.|++.|..+
T Consensus 261 wH~V~nled 269 (392)
T 3pua_A 261 IYATLTPVD 269 (392)
T ss_dssp EEEEEEEEE
T ss_pred eEEEecCCC
Confidence 999999754
No 260
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=93.87 E-value=0.088 Score=48.69 Aligned_cols=71 Identities=18% Similarity=0.129 Sum_probs=45.4
Q ss_pred ceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEc--CCC-----ceEEEEEcCCCEEEeCCCcEEEEEecCCCc
Q 018395 36 NIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVL--PEK-----EEKVVAIKKGDGIALPFGVVTWWYNKEDTE 107 (356)
Q Consensus 36 ~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~--~~~-----~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~ 107 (356)
.+...++.|.||+.+.||.- .-++.+..+|..++-+-- +.+ ....+.+++|+++++-...+|+..|.|+++
T Consensus 90 ~l~~vRlrL~PG~~I~~HrD-~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~GE~w~~d~~~~H~v~N~g~~~ 167 (290)
T 1e5r_A 90 HLQMARSRNLKNAIVIPHRD-FVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRPGEIWFLDAATVHSAVNFSEIS 167 (290)
T ss_dssp SEEEEEEEEEESEEEEEECC-C--------CBCCEEEECSCCTTEEEEETTEEECCCTTEEEECCTTSCEEEEESSSSC
T ss_pred hhheEEEEeCCCCEeeCccC-ccccccccCCceEEEeeEecCCCcEEEECCEEEecCCCCEEEEcCCCeeEEEcCCCCC
Confidence 34667779999999998842 224343345554443321 111 113489999999999999999999998873
No 261
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=93.86 E-value=0.18 Score=49.56 Aligned_cols=62 Identities=19% Similarity=0.253 Sum_probs=48.4
Q ss_pred cCCCcccCeee-C-CCEEEEEEeCeEEEEEEcCCC-------------------------ceEEEEEcCCCEEEeCCCcE
Q 018395 45 EKNGFALPHYC-D-SARVAYVLQGSGVAGIVLPEK-------------------------EEKVVAIKKGDGIALPFGVV 97 (356)
Q Consensus 45 ~Pg~~~~pH~h-~-a~e~~yVl~G~~~~~vv~~~~-------------------------~~~~~~l~~GDv~~iP~G~~ 97 (356)
.+|+....|+. . +.-|..++.|+=+..++.|.. +-....+++||+++||.|+.
T Consensus 204 p~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGWw 283 (451)
T 2yu1_A 204 VRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGWI 283 (451)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTCE
T ss_pred cCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCce
Confidence 45666677776 3 456888999999998887652 12357899999999999999
Q ss_pred EEEEecCCC
Q 018395 98 TWWYNKEDT 106 (356)
Q Consensus 98 H~~~N~g~e 106 (356)
|++.|..++
T Consensus 284 H~V~nleds 292 (451)
T 2yu1_A 284 HAVYTPTDT 292 (451)
T ss_dssp EEEECSSCE
T ss_pred EEEecCCCe
Confidence 999998654
No 262
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=93.79 E-value=0.26 Score=45.05 Aligned_cols=81 Identities=12% Similarity=0.156 Sum_probs=55.7
Q ss_pred ccCceEEEEEEecCCCcc---cCeeeCC---C------EEEEE-Ee---CeEEEEEEcCCC-ceEEEEEcCCCEEEeCCC
Q 018395 33 RQGNIGAAKLALEKNGFA---LPHYCDS---A------RVAYV-LQ---GSGVAGIVLPEK-EEKVVAIKKGDGIALPFG 95 (356)
Q Consensus 33 ~~~~~~~~~~~l~Pg~~~---~pH~h~a---~------e~~yV-l~---G~~~~~vv~~~~-~~~~~~l~~GDv~~iP~G 95 (356)
....+-+..+ +.||+.- +||.|+. . |++|- +. |.+.-.+..+++ -..+..++-||++.+|.|
T Consensus 149 ~a~~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~G 227 (270)
T 2qjv_A 149 LADSLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXG 227 (270)
T ss_dssp CCSSCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSS
T ss_pred CcceEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCC
Confidence 3445666655 8899877 9999943 4 88874 33 555555544433 235689999999999999
Q ss_pred cEEEEEecCCCcEEEEEEee
Q 018395 96 VVTWWYNKEDTELVVLFLGD 115 (356)
Q Consensus 96 ~~H~~~N~g~e~l~~l~i~~ 115 (356)
. |-....-...+-+|.+.-
T Consensus 228 y-Hp~~a~pGy~~YylwvMa 246 (270)
T 2qjv_A 228 Y-HPVATIAGYDNYYLNVMA 246 (270)
T ss_dssp B-CCEEECTTCEEEEEEEEE
T ss_pred c-CCCcCCCCcccEEEEEEE
Confidence 9 986654344466777664
No 263
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=93.74 E-value=0.086 Score=50.88 Aligned_cols=64 Identities=16% Similarity=0.191 Sum_probs=49.3
Q ss_pred EEecC-CCcccCeee--CCCEEEEEEeCeEEEEEEcCCC-------------------------ceEEEEEcCCCEEEeC
Q 018395 42 LALEK-NGFALPHYC--DSARVAYVLQGSGVAGIVLPEK-------------------------EEKVVAIKKGDGIALP 93 (356)
Q Consensus 42 ~~l~P-g~~~~pH~h--~a~e~~yVl~G~~~~~vv~~~~-------------------------~~~~~~l~~GDv~~iP 93 (356)
+-+.| |+....|+. ...-|..+++|+=+..++.|.. +-....+++||+++||
T Consensus 179 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIP 258 (397)
T 3kv9_A 179 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 258 (397)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeC
Confidence 44444 666777887 3445788999999998887741 1235789999999999
Q ss_pred CCcEEEEEecCC
Q 018395 94 FGVVTWWYNKED 105 (356)
Q Consensus 94 ~G~~H~~~N~g~ 105 (356)
+|+.|+..|..+
T Consensus 259 sGW~H~V~nled 270 (397)
T 3kv9_A 259 TGWIHAVLTSQD 270 (397)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCCeEEccCCcC
Confidence 999999999754
No 264
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=93.66 E-value=4.2 Score=37.27 Aligned_cols=57 Identities=16% Similarity=0.183 Sum_probs=41.2
Q ss_pred EEEecCCCcccCeee-CCCEEEE-EEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEe
Q 018395 41 KLALEKNGFALPHYC-DSARVAY-VLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYN 102 (356)
Q Consensus 41 ~~~l~Pg~~~~pH~h-~a~e~~y-Vl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N 102 (356)
.++|+++....-.|. ...|+++ .+.|++.+.+ ++ .+++|..-|.+|+|.|.......
T Consensus 61 ~l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~v---dg--~~f~lg~~dalYVp~G~~~v~~a 119 (289)
T 1ywk_A 61 ELEIILDKELGVDYFLERRELGVINIGGPGFIEI---DG--AKETMKKQDGYYIGKETKHVRFS 119 (289)
T ss_dssp CEECCCSGGGTSSSTTTTEEEEEEECSSCEEEEE---TT--EEEEECTTCEEEECTTCCCEEEE
T ss_pred eEEcCCCceecccccCCCcEEEEEEccCeEEEEE---CC--EEEecCCCCEEEeCCCCeEEEEE
Confidence 477877776666665 5566555 5678999986 33 34799999999999997655444
No 265
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=93.65 E-value=0.16 Score=48.03 Aligned_cols=65 Identities=12% Similarity=0.007 Sum_probs=49.4
Q ss_pred EEEecC-CCcccCeee-CC-CEEEEEEeCeEEEEEEcCCC---------------------------------------c
Q 018395 41 KLALEK-NGFALPHYC-DS-ARVAYVLQGSGVAGIVLPEK---------------------------------------E 78 (356)
Q Consensus 41 ~~~l~P-g~~~~pH~h-~a-~e~~yVl~G~~~~~vv~~~~---------------------------------------~ 78 (356)
.+-+.| |+....|+. .. .-+..++.|+=++.++.|.. +
T Consensus 175 ~~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~ 254 (336)
T 3k2o_A 175 WFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFK 254 (336)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGC
T ss_pred EEEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCc
Confidence 345555 566678887 33 46999999999988876641 0
Q ss_pred eEEEEEcCCCEEEeCCCcEEEEEecCC
Q 018395 79 EKVVAIKKGDGIALPFGVVTWWYNKED 105 (356)
Q Consensus 79 ~~~~~l~~GDv~~iP~G~~H~~~N~g~ 105 (356)
.....+++||++++|+|+.|+..|.++
T Consensus 255 ~~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 255 PLEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSC
T ss_pred eEEEEECCCCEEEeCCCCcEEEecCCC
Confidence 124789999999999999999999875
No 266
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=93.20 E-value=0.37 Score=41.99 Aligned_cols=72 Identities=10% Similarity=0.111 Sum_probs=51.1
Q ss_pred EEEEEEecCCCcccCeee-CCCEE----EEEEeC-eEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEE
Q 018395 38 GAAKLALEKNGFALPHYC-DSARV----AYVLQG-SGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVL 111 (356)
Q Consensus 38 ~~~~~~l~Pg~~~~pH~h-~a~e~----~yVl~G-~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l 111 (356)
++....|.||+.+.||.- ..-.+ ..++-. .+.+.+ ++ ..+..++|+++++.-...|+..|.++++ +++
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V---~~--~~~~w~eGe~~~fDds~~Hev~N~~d~~-Rvv 176 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRC---AN--ETKTWEEGKVLIFDDSFEHEVWQDASSF-RLI 176 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEE---TT--EEECCCBTCEEEECTTSCEEEEECSSSC-EEE
T ss_pred eEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEE---CC--EEEEeeCCcEEEEcCCeEEEEEECCCCC-EEE
Confidence 578899999999999987 32222 122222 344443 22 3489999999999999999999998884 444
Q ss_pred EEee
Q 018395 112 FLGD 115 (356)
Q Consensus 112 ~i~~ 115 (356)
.+++
T Consensus 177 L~~D 180 (197)
T 3rcq_A 177 FIVD 180 (197)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4455
No 267
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=93.08 E-value=3.3 Score=36.50 Aligned_cols=132 Identities=14% Similarity=0.087 Sum_probs=81.5
Q ss_pred CCCcEEEEeCCCCCC------CccccCceeEEEEecCCCeecccccccCCeeEEEEEece-EEEEEEccCCc--------
Q 018395 202 KNGGRVVLLNTKNLP------LVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGS-GRAQIVGPDGK-------- 266 (356)
Q Consensus 202 ~~gG~~~~~~~~~~p------~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~-~~~~iv~~~g~-------- 266 (356)
+.||+.++....... .-+. ..+.-..-|.+|.. =|||...+.|+-+...|. .++.++.++|+
T Consensus 34 PEGG~yrEt~Rs~~~v~~~~~~~R~-~~TaIYfLL~~g~~--S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~ 110 (225)
T 3m3i_A 34 PEGGYYSEVVRSAHKVDNEEGNRRH-AYTTIYFLCTPESP--SHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQ 110 (225)
T ss_dssp TTSSEEEEEEECSSEEECTTSCEEE-SCEEEEEEECSSSC--EEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC----
T ss_pred CCCceEEEEEECCCcccCCCCCCcc-cceeEEEEecCCCC--cccEEecCCEEEEEECCCCEEEEEEcCCCccccccccc
Confidence 346666665544321 1111 23455566788885 488877799999999997 58889998882
Q ss_pred -------------------eEEEE----EecCCc--EEEEcCCcEEEEe-eCCC-----CeEEEEEEcCCCCceeccccc
Q 018395 267 -------------------RVLET----TVKAGN--LFIVPRFYVVSKI-ADPD-----GLAWFSIITTPNPIFTHLAGS 315 (356)
Q Consensus 267 -------------------~~~~~----~l~~Gd--v~vvP~g~~h~~~-~~~~-----~~~~~~~~~~~~p~~~~laG~ 315 (356)
..-.. ++.+|+ .++||+|.+..-. .+++ +..+++..-+. +|.|-
T Consensus 111 ~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCtVaP--GFdF~--- 185 (225)
T 3m3i_A 111 PPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCIVSP--GFDYR--- 185 (225)
T ss_dssp --------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEEEES--CCCGG---
T ss_pred ccccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEEEcC--Cccch---
Confidence 22222 345676 5699999987753 2322 45666544333 33321
Q ss_pred cccccCCCHHHHHHHcCCCHHHHHHHHh
Q 018395 316 IGTWKSLSPSVLEAAFNVPSDVEKQFRS 343 (356)
Q Consensus 316 ~s~l~~~p~~vl~~af~~~~~~~~~l~~ 343 (356)
=|.-++.+-|.+.|.--++.+++|-.
T Consensus 186 --DFel~~~~~L~~~~P~~~~~I~~lt~ 211 (225)
T 3m3i_A 186 --DFEIFTQAQLMELYPQHEAVIKQMAY 211 (225)
T ss_dssp --GCEECBHHHHHHHCGGGHHHHHHHSB
T ss_pred --hcEecCHHHHHHHCchHHHHHHHhch
Confidence 12224677778888777788888854
No 268
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=92.91 E-value=0.15 Score=50.68 Aligned_cols=64 Identities=23% Similarity=0.245 Sum_probs=48.9
Q ss_pred EecCCCcccCeee--CCCEEEEEEeCeEEEEEEcCCC-------------------------ceEEEEEcCCCEEEeCCC
Q 018395 43 ALEKNGFALPHYC--DSARVAYVLQGSGVAGIVLPEK-------------------------EEKVVAIKKGDGIALPFG 95 (356)
Q Consensus 43 ~l~Pg~~~~pH~h--~a~e~~yVl~G~~~~~vv~~~~-------------------------~~~~~~l~~GDv~~iP~G 95 (356)
--..|+....|+- ...-|..|++|+=+.-++.|.. ......+++||+++||+|
T Consensus 302 mg~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsG 381 (528)
T 3pur_A 302 AGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAG 381 (528)
T ss_dssp EECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTT
T ss_pred EeCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCC
Confidence 3355667778876 4456888999999998887751 113478999999999999
Q ss_pred cEEEEEecCCC
Q 018395 96 VVTWWYNKEDT 106 (356)
Q Consensus 96 ~~H~~~N~g~e 106 (356)
+.|.++|..+.
T Consensus 382 W~HaV~tleDS 392 (528)
T 3pur_A 382 WIHAVLTPVDS 392 (528)
T ss_dssp CEEEEEEEEEE
T ss_pred ceEEEecCCCe
Confidence 99999997543
No 269
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=92.90 E-value=0.22 Score=49.51 Aligned_cols=63 Identities=13% Similarity=0.168 Sum_probs=50.9
Q ss_pred cCCCeecccccccCCeeEEEEEeceEEEEEEccCC------------------------ceEEEEEecCCcEEEEcCCcE
Q 018395 231 DGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDG------------------------KRVLETTVKAGNLFIVPRFYV 286 (356)
Q Consensus 231 ~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g------------------------~~~~~~~l~~Gdv~vvP~g~~ 286 (356)
..|+....|.-+.+++-|..|++|+=++-++.|.- ...+...+++||+++||.||+
T Consensus 304 ~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~ 383 (528)
T 3pur_A 304 MAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWI 383 (528)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCce
Confidence 45777789999886678999999999998888841 123456899999999999999
Q ss_pred EEEeeCC
Q 018395 287 VSKIADP 293 (356)
Q Consensus 287 h~~~~~~ 293 (356)
|+..+..
T Consensus 384 HaV~tle 390 (528)
T 3pur_A 384 HAVLTPV 390 (528)
T ss_dssp EEEEEEE
T ss_pred EEEecCC
Confidence 9986643
No 270
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=92.06 E-value=0.74 Score=44.99 Aligned_cols=204 Identities=12% Similarity=-0.028 Sum_probs=107.6
Q ss_pred Ceee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEEeeCCC-CCCCCceeEEe
Q 018395 52 PHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSK-GHKAGEFTNFF 129 (356)
Q Consensus 52 pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i~~~~~-~~~pg~~~~f~ 129 (356)
.-++ ++++++|+.+|++++.- +-| ...+++||+++||+|+.+.+.=.+ +.+...+-..+. +.-|..=
T Consensus 172 ~f~NaDGD~Livpq~G~l~i~T--EfG---~L~v~pgei~VIPRGi~frv~l~~--p~Rgyi~E~~g~~f~LP~lG---- 240 (471)
T 1eyb_A 172 CFYNSDGDFLIVPQKGNLLIYT--EFG---KMLVQPNEICVIQRGMRFSIDVFE--ETRGYILEVYGVHFELPDLG---- 240 (471)
T ss_dssp EEEESSEEEEEEEEESCEEEEE--TTE---EEEECTTEEEEECTTCCEEEECSS--SEEEEEEEEESCCEECCCCG----
T ss_pred eeecCCCCEEEEEEeCCEEEEE--ecc---cEEeccCCEEEECCccEEEEeeCC--CceEEEEEccCCcccccccc----
Confidence 3356 89999999999999964 223 268999999999999999886554 555554432221 2333210
Q ss_pred ecccccccccCcHHHHHhhccCCHHHHHHhhcccC--CceEEEcCCCCcC----CCCC-----cccCCCceeeccCCCCC
Q 018395 130 LTGANGIFTGFSTEFVSRAWDLDENTVKTLVGKQT--GKGIVKLDANAKL----PEPK-----KEHRDGMAFNCEEAPLD 198 (356)
Q Consensus 130 lag~~s~l~~~~~~vl~~af~~~~~~~~~l~~~q~--~~~iv~~~~~~~~----~~p~-----~~~~~~~~~~l~~~~~~ 198 (356)
.-|+++... ++| |..+..-.+.- ... -.+++|...+... -.|- ...-.+++|||..=.|.
T Consensus 241 piGanglan--~RD-----F~~PvA~~ed~--~~~~~~~vv~K~~G~l~~~~~~hsPfDVVaWhGn~~PYkydl~~F~pI 311 (471)
T 1eyb_A 241 PIGANGLAN--PRD-----FLIPIAWYEDR--QVPGGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKYNLKNFMVI 311 (471)
T ss_dssp GGTTSCBSC--GGG-----EEEECCCCCCC--EEEEEEEEEEEETTEEEEEEEEECSCCEEEEEESCCCEEEEGGGCBCC
T ss_pred ccccCCccC--hhh-----ccCcccccccc--CCCccEEEEEEeCCeeEEEecCCCCceEEeEcCcccCeEechHHcccc
Confidence 002111111 222 11111111100 011 1245554432210 1232 12235678888853332
Q ss_pred cc------cCCCcEEEEeCCCCCCCccccCceeE----EEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceE
Q 018395 199 VD------IKNGGRVVLLNTKNLPLVGEVGCGAD----LVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRV 268 (356)
Q Consensus 199 ~~------~~~gG~~~~~~~~~~p~l~~l~~s~~----~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~ 268 (356)
.. .+.--.+.++. .+-|...- ++.. |-...++++++|.||.|-.+|+++.+.|.-.. |
T Consensus 312 ~svs~dH~dPSIftVltap-s~~pg~av--~dFViFpPRw~v~e~TfrpPyyHrNv~SEfmgli~G~y~a--------k- 379 (471)
T 1eyb_A 312 NSVAFDHADPSIFTVLTAK-SVRPGVAI--ADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEA--------K- 379 (471)
T ss_dssp CCSSSSCCCGGGGEEEEEE-CSSTTCEE--EEEEEECSEEECCSSSCCSCCCBCCSCEEEEEECCC--------------
T ss_pred cccccccCCCCcceEEEcc-CCCCCceE--EeEeecCCccCCCCCccCCCCCccchhhhhhhhccccccc--------c-
Confidence 10 11111223332 12333221 2222 33678999999999999788899999996422 1
Q ss_pred EEEEecCCcEEEEcCCcEEE
Q 018395 269 LETTVKAGNLFIVPRFYVVS 288 (356)
Q Consensus 269 ~~~~l~~Gdv~vvP~g~~h~ 288 (356)
...+.+|.+-.=|.+.+|=
T Consensus 380 -~~Gf~pGg~SLH~~~~pHG 398 (471)
T 1eyb_A 380 -QGGFLPGGGSLHSTMTPHG 398 (471)
T ss_dssp ----CCTTCEEEECTTCCBC
T ss_pred -ccCcCCCceeccCCCcCCC
Confidence 1237888888888888884
No 271
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=91.94 E-value=3.4 Score=34.32 Aligned_cols=100 Identities=14% Similarity=0.034 Sum_probs=63.1
Q ss_pred CCCcEEEEeCCCCCCCccccCceeEEEEecCCCeeccccccc-CCeeEEEEEece-EEEEEEccCCce---EEEEEecCC
Q 018395 202 KNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCD-SALQVTYIVRGS-GRAQIVGPDGKR---VLETTVKAG 276 (356)
Q Consensus 202 ~~gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~-~A~ei~~v~~G~-~~~~iv~~~g~~---~~~~~l~~G 276 (356)
+.||+.++........-+.. .++-..-|.+|... |||.. .+.|+-+-..|. .++.++.++|.. ++-.++..|
T Consensus 20 PEGG~yrEt~Rs~~~~~R~~-~TaIYfLL~~g~~S--~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~G 96 (154)
T 1znp_A 20 PEGGFYHQTFRDKAGGERGH-STAIYYLLEKGVRS--HWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEG 96 (154)
T ss_dssp TTSSEEEEEEECSSSTTTCS-CEEEEEEEESSCCE--EEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTT
T ss_pred CCCccEEEEEeCCCCCCCcc-eeEEEEEecCCCCC--cceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccC
Confidence 45777776665433222222 33444457788765 78775 599999999996 788889888742 111155678
Q ss_pred cE--EEEcCCcEEEEeeCCCCeEEEEEEcCC
Q 018395 277 NL--FIVPRFYVVSKIADPDGLAWFSIITTP 305 (356)
Q Consensus 277 dv--~vvP~g~~h~~~~~~~~~~~~~~~~~~ 305 (356)
++ ++||+|.+..-... .+..+++..-+.
T Consensus 97 e~pQ~vVP~G~WqaA~~~-g~~~LVsCtVaP 126 (154)
T 1znp_A 97 ERPQVIVPANCWQSAESL-GDFTLVGCTVSP 126 (154)
T ss_dssp EESEEEECTTCEEEEEES-SSEEEEEEEESS
T ss_pred cccEEEEcCCEEEEeeEC-CCeEEEEEEecC
Confidence 75 79999998765322 355566554333
No 272
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=91.68 E-value=2 Score=32.68 Aligned_cols=69 Identities=9% Similarity=-0.030 Sum_probs=51.1
Q ss_pred eEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 37 IGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 37 ~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
-......+.||. -++. .+.|++-|++|.+++.+ |+..+. ...++||.|.+|++...-+.-. +....+|-
T Consensus 23 ~~~TvGVm~pGe---ytF~T~~~E~M~vvsG~~~V~l--pg~~ew-~~~~aGesF~Vpans~F~l~v~--~~~~YlC~ 92 (94)
T 2oyz_A 23 QDVSVGVMLPGE---YTFGTQAPERMTVVKGALVVKR--VGEADW-TTYSSGESFDVEGNSSFELQVK--DATAYLCE 92 (94)
T ss_dssp EEEEEEEECSEE---EEEEESSCEEEEEEESEEEEEE--TTCSSC-EEEETTCEEEECSSEEEEEEES--SCEEEEEE
T ss_pred CCEEEEEEeceE---EEEcCCCeEEEEEEEeEEEEEc--CCCCcC-EEECCCCEEEECCCCEEEEEEc--ccEeEEEE
Confidence 344556677775 4455 89999999999999986 333223 7999999999999999888764 34666663
No 273
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=91.02 E-value=7.3 Score=33.84 Aligned_cols=107 Identities=17% Similarity=0.186 Sum_probs=64.7
Q ss_pred eeEEEEecCCC-eecccccccCCeeEEEEEeceEEEEEEccCCceEEEE----EecCCc--EEEEcCCcEEEEeeC-CCC
Q 018395 224 GADLVRLDGKA-MCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLET----TVKAGN--LFIVPRFYVVSKIAD-PDG 295 (356)
Q Consensus 224 s~~~v~l~~g~-~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~----~l~~Gd--v~vvP~g~~h~~~~~-~~~ 295 (356)
+.-..-|.+++ +. |||...+.|+-+-..|....-++.++|.. -+. ++..|+ .++||+|++..-... .+.
T Consensus 80 TaIYfLL~~~~~~S--~wHRv~sdEiW~~h~G~p~~~li~~dg~~-~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~ 156 (203)
T 1xe7_A 80 TLIYYLLTPDSPIG--KFHKNINRIIHILQRGKGQYVLVYPDGQV-KSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEE 156 (203)
T ss_dssp EEEEEEEBTTBCEE--EEEEESSCEEEEEEEECEEEEEECTTSCE-EEEEESSCGGGTCBSEEEECTTCEEEEEECCCTT
T ss_pred eEEEEEEcCCCCcc--cceeeCCCEEEEEEcCCccEEEEcCCCCE-EEEEeCCCcccCcccEEEEcCCEEEEeEecCCCC
Confidence 34445578786 44 88876699999999997776788888742 122 455576 379999998776322 222
Q ss_pred e---EEEEEEcCCCCceeccccccccccCCCHH-HHHHHcCCCHHHHHHHH
Q 018395 296 L---AWFSIITTPNPIFTHLAGSIGTWKSLSPS-VLEAAFNVPSDVEKQFR 342 (356)
Q Consensus 296 ~---~~~~~~~~~~p~~~~laG~~s~l~~~p~~-vl~~af~~~~~~~~~l~ 342 (356)
. .+++..-+. ++.|- =+.-.+.+ -|.+.|. .+.++.|+
T Consensus 157 ~~~~tLVgCtVaP--GFdF~-----dFel~~~~~~L~~~~P--~~~~~~l~ 198 (203)
T 1xe7_A 157 FDNGFLISEVVVP--GFDFE-----DHTFLKGEDELKHLVG--PEKAAELA 198 (203)
T ss_dssp TTTCEEEEEEESS--CCCGG-----GEEECCHHHHHHHHHC--HHHHHHTG
T ss_pred cccceEEEEEecC--Cccch-----hcEecCCcHHHHHHCC--HHHHHHHH
Confidence 2 455554333 33321 11223555 6666664 55566654
No 274
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=90.20 E-value=2.1 Score=38.69 Aligned_cols=70 Identities=14% Similarity=0.140 Sum_probs=52.9
Q ss_pred EEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCC--cEEEEee-CC-CCeEEEEEE
Q 018395 227 LVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRF--YVVSKIA-DP-DGLAWFSII 302 (356)
Q Consensus 227 ~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g--~~h~~~~-~~-~~~~~~~~~ 302 (356)
...+.||+=+.||-|.+ -..+.||++|+.. --|+.|+. ..+++|||-.+-+| ..|...+ .. +.++++-+.
T Consensus 68 ~~~~~pg~gf~~HPHrg-~EtvTyvl~G~~~--H~DS~Gn~---~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlW 141 (256)
T 2vec_A 68 QEVLAPGAAFQPRTYPK-VDILNVILDGEAE--YRDSEGNH---VQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLW 141 (256)
T ss_dssp EEEECTTCEEEEECCSS-EEEEEEEEESEEE--EEETTSCE---EEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEE
T ss_pred ccccCCCCccCCcCCCC-cEEEEEEEeeEEE--EEeCCCCE---EEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEE
Confidence 45678888889999986 5558899999854 45777765 57999999999665 5888855 33 568877664
No 275
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=89.53 E-value=1.2 Score=43.56 Aligned_cols=66 Identities=12% Similarity=0.128 Sum_probs=44.4
Q ss_pred ceEEEEEEec--CCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEec
Q 018395 36 NIGAAKLALE--KNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNK 103 (356)
Q Consensus 36 ~~~~~~~~l~--Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~ 103 (356)
.+++.++++. +++....--..+..+++|++|++++.. .++......|++||++++|++..-.+.+.
T Consensus 356 eF~v~~~~~~~~~~~~~~~~~~~~~~illv~~G~g~i~~--~~~~~~~~~l~~G~~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQVIEGLNGPSIVIATNGKGTIQI--TGDDSTKQKIDTGYVFFVAPGSSIELTAD 423 (440)
T ss_dssp SCEEEEEECCTTTCCEEEECCCSSCEEEEEEESEEEEEE--TTCGGGCEEEETTCEEEECTTCCEEEEEC
T ss_pred eEEEEEEEecCCCCceeEEecCCCcEEEEEEeCeEEEEe--CCcccceEEeccCCEEEEeCCCcEEEEEe
Confidence 5778888887 453221112278899999999999975 11101015899999999999955555554
No 276
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=89.05 E-value=4.2 Score=36.33 Aligned_cols=70 Identities=17% Similarity=0.160 Sum_probs=53.3
Q ss_pred EEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCC--cEEEEee-C-CCCeEEEEEE
Q 018395 227 LVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRF--YVVSKIA-D-PDGLAWFSII 302 (356)
Q Consensus 227 ~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g--~~h~~~~-~-~~~~~~~~~~ 302 (356)
.-.+.||+=+.||=|.+ =..+.||++|+. +=-|+.|+. ..+++|||-.+-+| ..|...+ . .+.++++=+.
T Consensus 45 ~d~i~pg~gf~~HPHrg-~EtvTyvl~G~~--~H~DS~Gn~---~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlW 118 (242)
T 1tq5_A 45 DDVIEAGQGFGTHPHKD-MEILTYVLEGTV--EHQDSMGNK---EQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIW 118 (242)
T ss_dssp EEEECTTCEEEEEEECS-CEEEEEEEESEE--EEEESSSCE---EEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEE
T ss_pred cceeCCCCcCCCcCCCC-cEEEEEEEEeEE--EEEeCCCCc---EEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEE
Confidence 45688887789999987 666999999985 445777766 57999999999555 7788755 3 3568877664
No 277
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=89.03 E-value=2.8 Score=38.57 Aligned_cols=77 Identities=12% Similarity=0.060 Sum_probs=52.8
Q ss_pred cCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
...+.+..++|+||+....... .-.-++||++|++.+. +......+.++.++++..|..-.+.|..+++++++.
T Consensus 166 ~~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~-----g~~~~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LL 240 (290)
T 1j1l_A 166 RTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG-----PDDAQQKIEPHHTAVLGEGDSVQVENKDPKRSHFVL 240 (290)
T ss_dssp SSCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES-----CTTSCEEECTTEEEEECSCSEEEEECCSSSCEEEEE
T ss_pred cCCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC-----CcccceeccCceEEEecCCCEEEEEEcCCCCcEEEE
Confidence 4567888899999997754444 4567999999999873 211113567777777777776666664455677776
Q ss_pred Eee
Q 018395 113 LGD 115 (356)
Q Consensus 113 i~~ 115 (356)
+.-
T Consensus 241 l~G 243 (290)
T 1j1l_A 241 IAG 243 (290)
T ss_dssp EEE
T ss_pred EEc
Confidence 544
No 278
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=88.22 E-value=1.8 Score=38.00 Aligned_cols=76 Identities=12% Similarity=0.146 Sum_probs=50.0
Q ss_pred EEEecCCCeecccccccCCee-EEEEEe--ceEEEEEEccCC-----------------ceEEEEEecCCcEEEEcCCcE
Q 018395 227 LVRLDGKAMCSPGFSCDSALQ-VTYIVR--GSGRAQIVGPDG-----------------KRVLETTVKAGNLFIVPRFYV 286 (356)
Q Consensus 227 ~v~l~~g~~~~PH~h~~~A~e-i~~v~~--G~~~~~iv~~~g-----------------~~~~~~~l~~Gdv~vvP~g~~ 286 (356)
...+.+|+...+|.|+++--. +.|+-. +.+.+.|.+|.. +....-.-++||+++||.-+.
T Consensus 107 ~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l~ 186 (216)
T 2rg4_A 107 INILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLR 186 (216)
T ss_dssp EEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETTSC
T ss_pred EEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCCCE
Confidence 346688999999999873222 233333 356777777631 112234678999999999999
Q ss_pred EEEee--CCCCeEEEEEE
Q 018395 287 VSKIA--DPDGLAWFSII 302 (356)
Q Consensus 287 h~~~~--~~~~~~~~~~~ 302 (356)
|.... +++.-.-++|+
T Consensus 187 H~V~p~~~~~~RiSIsFN 204 (216)
T 2rg4_A 187 HEVPMNMAEEDRISVSFN 204 (216)
T ss_dssp EEECCCCSSSCEEEEEEE
T ss_pred EeccCCCCCCCEEEEEEE
Confidence 99843 44455556665
No 279
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=87.65 E-value=4 Score=37.26 Aligned_cols=72 Identities=18% Similarity=0.252 Sum_probs=51.5
Q ss_pred cCceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCC-C----cEEEEEecCCCc
Q 018395 34 QGNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPF-G----VVTWWYNKEDTE 107 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~-G----~~H~~~N~g~e~ 107 (356)
...+.+..++|+||+....... .-.-++||++|++.+. +.. ..|.+||.+++.. | ..-.+.+.. +
T Consensus 164 ~~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~-----g~~--~~l~~~d~~~~~~~~~~~~~~l~l~a~~--~ 234 (277)
T 2p17_A 164 IVPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG-----ADN--IEGKAGQALFFSRHNRGEETELNVTARE--K 234 (277)
T ss_dssp SSCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET-----TTT--EEEETTEEEEECCCCTTCEEEEEEEESS--S
T ss_pred CCCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC-----CCc--eEeCCCcEEEEcCCCCCccceEEEEeCC--C
Confidence 4578888999999998765554 4567999999998772 211 3799999999986 6 555555543 4
Q ss_pred EEEEEEe
Q 018395 108 LVVLFLG 114 (356)
Q Consensus 108 l~~l~i~ 114 (356)
.+++.+.
T Consensus 235 a~~Ll~~ 241 (277)
T 2p17_A 235 LRLLLYA 241 (277)
T ss_dssp EEEEEEE
T ss_pred cEEEEEe
Confidence 6666543
No 280
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=87.43 E-value=2.7 Score=41.07 Aligned_cols=87 Identities=11% Similarity=0.038 Sum_probs=55.0
Q ss_pred CcEEEEeCCCCCCCccccCceeEEEEecCCCe-ecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEc
Q 018395 204 GGRVVLLNTKNLPLVGEVGCGADLVRLDGKAM-CSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVP 282 (356)
Q Consensus 204 gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~-~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP 282 (356)
-|..+.+...+ |.++. |+++.....+. +| ..--+|.+ +.+++|+-+|+++++ +.-| + -.+++||+.|||
T Consensus 140 ~Gl~tl~gngD-~~~~~-G~aI~~y~~n~-sM~~~~f~NaD-GD~Livpq~G~l~i~--TEfG-~---L~v~pgei~VIP 209 (471)
T 1eyb_A 140 SGLHTLCGAGD-IKSNN-GLAIHIFLCNT-SMENRCFYNSD-GDFLIVPQKGNLLIY--TEFG-K---MLVQPNEICVIQ 209 (471)
T ss_dssp TTEEEEEEESC-GGGTC-CEEEEEEEECS-CCCSEEEEESS-EEEEEEEEESCEEEE--ETTE-E---EEECTTEEEEEC
T ss_pred cchhheeccCC-ccccc-ceEEEEEeCCC-CcccceeecCC-CCEEEEEEeCCEEEE--Eecc-c---EEeccCCEEEEC
Confidence 34444443333 33322 44443333333 55 34566888 999999999998776 4445 2 259999999999
Q ss_pred CCcEEEEeeCCCCeEEEEE
Q 018395 283 RFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 283 ~g~~h~~~~~~~~~~~~~~ 301 (356)
||..+.+.-.. ++..+.+
T Consensus 210 RGi~frv~l~~-p~Rgyi~ 227 (471)
T 1eyb_A 210 RGMRFSIDVFE-ETRGYIL 227 (471)
T ss_dssp TTCCEEEECSS-SEEEEEE
T ss_pred CccEEEEeeCC-CceEEEE
Confidence 99999885444 6655444
No 281
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=87.40 E-value=3.6 Score=37.13 Aligned_cols=69 Identities=17% Similarity=0.213 Sum_probs=55.4
Q ss_pred ceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEE-EEEecCCCcEEEEEE
Q 018395 36 NIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVT-WWYNKEDTELVVLFL 113 (356)
Q Consensus 36 ~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H-~~~N~g~e~l~~l~i 113 (356)
+-+-.++.++|+--.++-.|.++--+||++|+..++ + ..+.+|+-.++|+|+.- .+.-.|+++..+|.+
T Consensus 90 GaSTl~V~fpp~~~~P~Gi~~ad~E~fVL~G~i~~G-----~----~~l~~h~Y~f~PaGV~~~~~kv~~~~g~~iL~f 159 (303)
T 2qdr_A 90 GASTSRVVLPPKFEAPSGIFTADLEIFVIKGAIQLG-----E----WQLNKHSYSFIPAGVRIGSWKVLGGEEAEILWM 159 (303)
T ss_dssp SCEEEEEEECTTCEECCBEESSCEEEEEEESEEEET-----T----EEECTTEEEEECTTCCBCCEEEETTSCEEEEEE
T ss_pred CcceEEEEecCCCCCCCcccccceEEEEEEeEEEeC-----C----EEecCCceEEecCCCccCceeecCCCCcEEEEE
Confidence 556678999999999999996666699999999883 2 68999999999999743 233457777888875
No 282
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=87.11 E-value=9.2 Score=29.82 Aligned_cols=69 Identities=9% Similarity=0.019 Sum_probs=51.2
Q ss_pred EEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 39 AAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
.....+.||. .+-++. .+.|+.-|++|.+++.+ |+..+. ...++|+.|.+|++...-+.-. +...++|-
T Consensus 39 kTlGVm~PGe-~~YtF~T~~~E~MevvsG~l~V~L--pg~~eW-~~~~aGesF~VpanssF~lkv~--~~~~Y~C~ 108 (111)
T 3hqx_A 39 KTLGVILPTE-QPLTFETHVPERMEIISGECRVKI--ADSTES-ELFRAGQSFYVPGNSLFKIETD--EVLDYVCH 108 (111)
T ss_dssp EEEEEECCCS-SCEEEECSSCEEEEEEESEEEEEE--TTCSSC-EEEETTCEEEECTTCEEEEECS--SCEEEEEE
T ss_pred EEEEEEeccc-cceEEcCCCcEEEEEEEeEEEEEc--CCcccC-EEeCCCCEEEECCCCcEEEEEC--cceeEEEE
Confidence 3456677873 224555 89999999999999986 333233 6899999999999999888764 35667764
No 283
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=87.06 E-value=3.1 Score=33.04 Aligned_cols=61 Identities=15% Similarity=0.022 Sum_probs=44.4
Q ss_pred CCcccCeeeCCCE--EEEEEeCeEEEEEEcCCCc---eEEEEEcCCCEEEeCCCcEEEEEecCCCc
Q 018395 47 NGFALPHYCDSAR--VAYVLQGSGVAGIVLPEKE---EKVVAIKKGDGIALPFGVVTWWYNKEDTE 107 (356)
Q Consensus 47 g~~~~pH~h~a~e--~~yVl~G~~~~~vv~~~~~---~~~~~l~~GDv~~iP~G~~H~~~N~g~e~ 107 (356)
-++...|-..+.- .+-|++|+.+.....+++. ....-+.+|+..++|+...|.+.-.+|..
T Consensus 26 ~~l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~ 91 (119)
T 3dl3_A 26 EALLTHHNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQ 91 (119)
T ss_dssp HHHHSSBCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCE
T ss_pred HHHHhccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeE
Confidence 3456666554444 4569999999987765543 24468899999999999999999555543
No 284
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=86.49 E-value=1.6 Score=42.07 Aligned_cols=57 Identities=12% Similarity=0.161 Sum_probs=42.7
Q ss_pred CceEEEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEE
Q 018395 35 GNIGAAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTW 99 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~ 99 (356)
..+++.++++.++.. +.. ++..++.|++|++++.. ++ ....|++||++++|++..-+
T Consensus 322 ~~F~v~~~~l~~~~~---~~~~~~~~il~v~~G~~~l~~---~~--~~~~l~~G~~~fvpa~~~~~ 379 (394)
T 2wfp_A 322 DDFAFSLHDLALQET---SIGQHSAAILFCVEGEAVLRK---DE--QRLVLKPGESAFIGADESPV 379 (394)
T ss_dssp SSCEEEEEECCSSCE---EECCSSCEEEEEEEEEEEEEE---TT--EEEEECTTCEEEECGGGCCE
T ss_pred CEEEEEEEEEcCCeE---EecCCCcEEEEEEeceEEEEE---CC--eEEEEccCcEEEEeCCCceE
Confidence 457788888876632 233 77899999999998864 22 34799999999999986433
No 285
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=86.18 E-value=2.7 Score=32.97 Aligned_cols=53 Identities=15% Similarity=0.147 Sum_probs=42.0
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLF 279 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~ 279 (356)
+....+.+|-+.-..-- . +..+.+|++|.+++...+++|+...-..+.+||+|
T Consensus 28 ~~~~~~~~g~~i~~~g~-~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 28 MSEVTLARGDTLFHEGD-P-GDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELI 80 (149)
T ss_dssp CEEEEECTTCEEECTTS-E-ECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEE
T ss_pred ceEEEeCCCCEEECCCC-C-CCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEe
Confidence 45678888877643322 2 56799999999999999999988777799999987
No 286
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=85.89 E-value=4.5 Score=32.09 Aligned_cols=70 Identities=10% Similarity=0.088 Sum_probs=48.3
Q ss_pred CeecccccccCCeeEEEEEeceEEEEEEccCCc-e-EEEEEecCCcEEEEcCCcEEEEeeCCCCeEE-EEEEcC
Q 018395 234 AMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGK-R-VLETTVKAGNLFIVPRFYVVSKIADPDGLAW-FSIITT 304 (356)
Q Consensus 234 ~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~-~-~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~-~~~~~~ 304 (356)
+++.-|--..+....+-|++|+++..+.+.+|. . .-..-+.+|+..+||.-.+|.+. -+++++| +.|+..
T Consensus 27 ~l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe-~sdD~~f~leFyc~ 99 (119)
T 3dl3_A 27 ALLTHHNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIE-LSDDAQFNINFWSD 99 (119)
T ss_dssp HHHSSBCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEE-ECTTCEEEEEEEEC
T ss_pred HHHhccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEE-ECCCeEEEEEEEEC
Confidence 355556422224556789999999999887664 1 11236789999999999999998 5566665 566543
No 287
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=85.43 E-value=1.5 Score=40.95 Aligned_cols=58 Identities=24% Similarity=0.320 Sum_probs=41.6
Q ss_pred CceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEE
Q 018395 35 GNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTW 99 (356)
Q Consensus 35 ~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~ 99 (356)
..+++.++++.++.... ...+..++.|++|++++.. ++ ....|++||++++|++...+
T Consensus 249 ~~F~~~~~~~~~~~~~~--~~~~~~il~v~~G~~~l~~---~~--~~~~l~~G~~~~vpa~~~~~ 306 (319)
T 1qwr_A 249 EYFSVYKWDINGEAEMA--QDESFLICSVIEGSGLLKY---ED--KTCPLKKGDHFILPAQMPDF 306 (319)
T ss_dssp SSCEEEEEEEEEEEEEC--CCSSCEEEEEEEEEEEEEE---TT--EEEEEETTCEEEECTTCCCE
T ss_pred CEEEEEEEEECCceEEc--cCCccEEEEEEcCeEEEEE---CC--EEEEEcCCcEEEEeCCCceE
Confidence 35677778877543221 1267889999999999864 23 24799999999999987433
No 288
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=83.90 E-value=4.4 Score=31.37 Aligned_cols=66 Identities=15% Similarity=0.103 Sum_probs=47.4
Q ss_pred EEEEEecCCCcccCeee-CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecCCCcEEEEE
Q 018395 39 AAKLALEKNGFALPHYC-DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLF 112 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h-~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~ 112 (356)
.....|.||. -++. .+.|++-|++|.+++.+ |+..+. ...++|+.|.+|++...-+.-. +...++|
T Consensus 38 kTlGVm~PGe---Y~F~T~~~E~MevvsG~l~V~L--pG~~eW-~~~~aGesF~VpanssF~lkv~--~~t~Y~C 104 (106)
T 3eo6_A 38 HSLTLLHPGV---YTLSSEVAETIRVLSGMAYYHA--EGANDV-QELHAGDSMVIPANQSYRLEVM--EPLDYLL 104 (106)
T ss_dssp EEEEEECSEE---EEECCSSCEEEEEEEEEEEEEC--TTCSSC-EEEETTCEEEECSSSCEEEEEE--EEEEEEE
T ss_pred EEEEEEeeeE---EEecCCCcEEEEEEEeEEEEEC--CCCccC-EEECCCCEEEECCCCcEEEEEC--ceEEEEE
Confidence 3455666763 3445 89999999999999975 443333 6999999999999998877653 2344554
No 289
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=83.70 E-value=4.2 Score=33.73 Aligned_cols=75 Identities=11% Similarity=-0.038 Sum_probs=50.4
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEE-Ec---CC--cEEEEeeCCCCeEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFI-VP---RF--YVVSKIADPDGLAW 298 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~v-vP---~g--~~h~~~~~~~~~~~ 298 (356)
+....+.+|-+.---= -. +..+.+|++|.+++...+++|+...-..+.+||++- +. .+ +.+...+ -+++++
T Consensus 30 ~~~~~~~~g~~l~~~G-~~-~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a-~~~~~v 106 (194)
T 3dn7_A 30 FQLKKVRKKETLLKTG-EI-CRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQS-VENCEL 106 (194)
T ss_dssp CEEEEECTTCEEECTT-SB-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEE-SSCEEE
T ss_pred CEEEEEcCCCEEECCC-Ce-eeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEE-ECCEEE
Confidence 3566777877663221 22 568999999999999999999887777899999985 21 12 2222233 455666
Q ss_pred EEEE
Q 018395 299 FSII 302 (356)
Q Consensus 299 ~~~~ 302 (356)
+.+.
T Consensus 107 ~~i~ 110 (194)
T 3dn7_A 107 LSIT 110 (194)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6664
No 290
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=83.13 E-value=4.4 Score=33.92 Aligned_cols=54 Identities=19% Similarity=0.237 Sum_probs=41.9
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFI 280 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~v 280 (356)
+....+.+|-+.---- -. +..+.+|++|.+++...+++|+...-..+.+||+|=
T Consensus 13 ~~~~~~~~g~~i~~~g-~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 13 CHRRRYTAKSTIIYAG-DR-CETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFG 66 (207)
T ss_dssp SEEEEECTTCEEECTT-SB-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEES
T ss_pred cceEEECCCCEEEcCC-CC-CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcc
Confidence 4566778887763222 22 567999999999999999999887777899999983
No 291
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=82.57 E-value=2.9 Score=32.59 Aligned_cols=54 Identities=9% Similarity=0.068 Sum_probs=34.6
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEE---EEEecCCcEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVL---ETTVKAGNLFI 280 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~---~~~l~~Gdv~v 280 (356)
+....+.+|-+.--- .-. +..+.+|++|.+++...+++|+... -..+.+||+|=
T Consensus 29 ~~~~~~~~g~~i~~~-g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKE-NSK-ADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECT-TSB-CCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeC-CCC-CCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 566777888765322 223 6689999999999999998887665 56889999874
No 292
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=82.56 E-value=4.8 Score=33.93 Aligned_cols=75 Identities=11% Similarity=-0.059 Sum_probs=51.2
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEE-----cCCcEEEEeeCCCCeEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIV-----PRFYVVSKIADPDGLAWF 299 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vv-----P~g~~h~~~~~~~~~~~~ 299 (356)
+....+.+|-+.-..= -. +..+.+|++|.+++...+++|+...-..+.+||+|=. ..-+.+...+ .++++++
T Consensus 22 ~~~~~~~~g~~i~~~g-~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a-~~~~~v~ 98 (216)
T 4ev0_A 22 FQRRLYPQGKPIFYQG-DL-GQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVA-VEDTELL 98 (216)
T ss_dssp CEEEEECTTCEEECTT-CB-CCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEE-SSSEEEE
T ss_pred heEEEeCCCCEEEeCC-CC-CCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEE-cCCEEEE
Confidence 4567788887764322 22 5689999999999999999998877789999999832 1112223333 3456666
Q ss_pred EEE
Q 018395 300 SII 302 (356)
Q Consensus 300 ~~~ 302 (356)
.+.
T Consensus 99 ~i~ 101 (216)
T 4ev0_A 99 ALF 101 (216)
T ss_dssp EEE
T ss_pred EEc
Confidence 664
No 293
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=82.12 E-value=11 Score=33.48 Aligned_cols=79 Identities=10% Similarity=0.039 Sum_probs=57.8
Q ss_pred ceeEEEEecCCCeecccccccCCeeEEEEEec-eEEEEEEccCC---------------ce-EEE----EEecCCcEEEE
Q 018395 223 CGADLVRLDGKAMCSPGFSCDSALQVTYIVRG-SGRAQIVGPDG---------------KR-VLE----TTVKAGNLFIV 281 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G-~~~~~iv~~~g---------------~~-~~~----~~l~~Gdv~vv 281 (356)
-....+.+.+|=..+-|+|+. =.|=+++--| +..+++..+.. .+ .+. -+|.||+-+-+
T Consensus 106 YaeK~Li~~~gQ~~P~H~H~~-K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 106 YAEKIMHVRDAQVTPMHFHWR-KREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICL 184 (246)
T ss_dssp EEEEEEEECBTCEEEEEEESS-CCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEE
T ss_pred ceeeEeeccCCCCCCcccCCC-ccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEec
Confidence 345667889999999999998 8888887776 66666665532 11 111 17899999999
Q ss_pred cCCcEEEEeeCCC--CeEEEEEE
Q 018395 282 PRFYVVSKIADPD--GLAWFSII 302 (356)
Q Consensus 282 P~g~~h~~~~~~~--~~~~~~~~ 302 (356)
|+|..|+..+..+ ++.+-.+.
T Consensus 185 ~Pg~~H~F~ae~g~G~vligEVS 207 (246)
T 3kmh_A 185 PPGLYHSFWAEAGFGDVLVGEVS 207 (246)
T ss_dssp CTTEEEEEEECTTSCCEEEEEEE
T ss_pred CCCCEEEEEecCCCccEEEEEcc
Confidence 9999999988766 45555553
No 294
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=82.11 E-value=4.8 Score=34.59 Aligned_cols=53 Identities=15% Similarity=0.135 Sum_probs=41.8
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLF 279 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~ 279 (356)
+....+.+|-+.-.-=. . +..+.+|++|.+++...+++|+...-..+.+||+|
T Consensus 34 ~~~~~~~~g~~i~~~G~-~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 34 AVWRSYDRGETLFLQEE-K-AQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp CEEEEECTTCEEECTTS-C-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred CEEEEECCCCEEEcCCC-c-cceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 45667788877633222 2 56899999999999999999988777789999998
No 295
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=81.57 E-value=2.9 Score=32.81 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=39.6
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIA 91 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~ 91 (356)
+...++++|......--.++.+++|++|.+.+...++++++. ...+.+||++-
T Consensus 28 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 81 (149)
T 2pqq_A 28 MSEVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIG 81 (149)
T ss_dssp CEEEEECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEES
T ss_pred ceEEEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEec
Confidence 357788888866443335678999999999998877766543 56889999873
No 296
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=81.51 E-value=5.6 Score=33.34 Aligned_cols=75 Identities=17% Similarity=0.107 Sum_probs=51.0
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEc-----C-CcEEEEeeCCCCeEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVP-----R-FYVVSKIADPDGLAW 298 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP-----~-g~~h~~~~~~~~~~~ 298 (356)
+....+.+|.+.-..=- . +..+.+|++|.+++...+++|+...-..+.+||+|=.. . -+.+...+ .+++++
T Consensus 19 ~~~~~~~~g~~i~~~g~-~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a-~~~~~v 95 (210)
T 3ryp_A 19 CHIHKYPSKSTLIHQGE-K-AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRA-KTACEV 95 (210)
T ss_dssp SEEEEECTTCEEECTTS-B-CCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEE-SSCEEE
T ss_pred cEEEEeCCCCEEECCCC-C-CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEE-CCcEEE
Confidence 45667788877643322 2 56899999999999999999988777789999998322 1 12223333 355666
Q ss_pred EEEE
Q 018395 299 FSII 302 (356)
Q Consensus 299 ~~~~ 302 (356)
+.+.
T Consensus 96 ~~i~ 99 (210)
T 3ryp_A 96 AEIS 99 (210)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6664
No 297
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=81.40 E-value=8.3 Score=29.21 Aligned_cols=68 Identities=19% Similarity=0.124 Sum_probs=50.7
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~ 301 (356)
....-+.||- -++.+. +.|+.=|++|+.++.+-....= .+.++||-|.||++.-.-+.. .+...+++.
T Consensus 25 ~TvGVm~pGe---ytF~T~-~~E~M~vvsG~~~V~lpg~~ew----~~~~aGesF~Vpans~F~l~v-~~~~~YlC~ 92 (94)
T 2oyz_A 25 VSVGVMLPGE---YTFGTQ-APERMTVVKGALVVKRVGEADW----TTYSSGESFDVEGNSSFELQV-KDATAYLCE 92 (94)
T ss_dssp EEEEEECSEE---EEEEES-SCEEEEEEESEEEEEETTCSSC----EEEETTCEEEECSSEEEEEEE-SSCEEEEEE
T ss_pred EEEEEEeceE---EEEcCC-CeEEEEEEEeEEEEEcCCCCcC----EEECCCCEEEECCCCEEEEEE-cccEeEEEE
Confidence 4445567774 467887 9999999999999998765431 368899999999987666543 356777764
No 298
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=80.98 E-value=5.6 Score=33.86 Aligned_cols=54 Identities=13% Similarity=0.069 Sum_probs=42.4
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFI 280 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~v 280 (356)
+....+.+|-+.-..=- . +..+.+|++|.+++...+++|+...-..+.+||+|=
T Consensus 34 ~~~~~~~~g~~i~~~g~-~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 34 SHRRRYPTRTDVFRPGD-P-AGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp SEEEEECTTCEEECTTS-B-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred CeEEEeCCCCEEECCCC-C-CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 45667788877643222 2 568999999999999999999887778899999984
No 299
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=80.76 E-value=6.5 Score=34.13 Aligned_cols=55 Identities=11% Similarity=0.140 Sum_probs=43.6
Q ss_pred ceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEE
Q 018395 223 CGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLF 279 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~ 279 (356)
..+....+.+|-+.-.--- . +..+.+|++|.+++...+++|+...-..+.+||+|
T Consensus 41 ~~~~~~~~~~ge~i~~~G~-~-~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~ 95 (243)
T 3la7_A 41 FPPVVETFERNKTIFFPGD-P-AERVYFLLKGAVKLSRVYEAGEEITVALLRENSVF 95 (243)
T ss_dssp CCCEEEEECTTCEEECTTS-B-CCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEE
T ss_pred chheeEEECCCCEEEcCCC-C-CceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEE
Confidence 3344778888887743322 2 56899999999999999999988777899999987
No 300
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=80.74 E-value=4.8 Score=34.15 Aligned_cols=77 Identities=13% Similarity=0.149 Sum_probs=52.6
Q ss_pred ceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEE----EcC--CcEEEEeeCCCCe
Q 018395 223 CGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFI----VPR--FYVVSKIADPDGL 296 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~v----vP~--g~~h~~~~~~~~~ 296 (356)
-.+....+.+|.+.--.-. . +..+.+|++|.+++...+++|+...-..+.+||+|= +-. -+.+...+ .+++
T Consensus 20 ~~~~~~~~~~g~~i~~~G~-~-~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A-~~~~ 96 (213)
T 1o5l_A 20 PCGKVIVFRKGEIVKHQDD-P-IEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVA-GENS 96 (213)
T ss_dssp GGSEEEEECTTCEEECTTC-B-CCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEE-SSSE
T ss_pred cccEEEEECCCCEEEcCCC-c-cceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEE-ccce
Confidence 3456778888887643322 2 567999999999999999999887777899999882 211 23333344 3456
Q ss_pred EEEEEE
Q 018395 297 AWFSII 302 (356)
Q Consensus 297 ~~~~~~ 302 (356)
+++.+.
T Consensus 97 ~v~~i~ 102 (213)
T 1o5l_A 97 KILSIP 102 (213)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 666654
No 301
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=80.70 E-value=5.7 Score=33.11 Aligned_cols=53 Identities=11% Similarity=-0.065 Sum_probs=41.0
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLF 279 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~ 279 (356)
+....+.+|-+.---= -. +..+.+|++|.+++...+++|+...-..+.+||+|
T Consensus 62 ~~~~~~~~ge~i~~~G-~~-~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEG-DP-GDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTT-SC-CCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCC-CC-CCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 5566777777653222 22 66899999999999999999987667789999987
No 302
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=80.56 E-value=2.6 Score=32.86 Aligned_cols=53 Identities=8% Similarity=0.060 Sum_probs=34.7
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE----EEEEcCCCEEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK----VVAIKKGDGIA 91 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~----~~~l~~GDv~~ 91 (356)
+...++++|..+..---.++.+++|++|.+.+....+++++. ...+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 456788888865433236889999999999998766665332 46788998874
No 303
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=80.05 E-value=2.6 Score=33.34 Aligned_cols=53 Identities=25% Similarity=0.328 Sum_probs=37.0
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLF 279 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~ 279 (356)
+....+.+|-+.-.--. . +..+.+|++|.+++...+++|+...-..+.+||+|
T Consensus 35 ~~~~~~~~g~~i~~~g~-~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGE-P-AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTS-B-CCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCC-c-cceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 56677888877643332 2 56799999999999988888876556689999987
No 304
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=79.82 E-value=4.8 Score=34.70 Aligned_cols=75 Identities=11% Similarity=0.083 Sum_probs=52.0
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEE----EcC-C-cEEEEeeCCCCeEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFI----VPR-F-YVVSKIADPDGLAW 298 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~v----vP~-g-~~h~~~~~~~~~~~ 298 (356)
+....+.+|-+.----. . +..+.+|++|.+++...+++|+..+-..+.+||+|= +-. . +.+...+ .+++++
T Consensus 43 ~~~~~~~~ge~i~~~G~-~-~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A-~~~~~v 119 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGN-P-CTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVA-HTEVHT 119 (232)
T ss_dssp CEEEEECTTCEEECTTS-B-CCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEE-SSCEEE
T ss_pred cEEEEECCCCEEECCCC-c-ccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEE-ccceEE
Confidence 66778888887643222 2 568999999999999999998877777899999882 211 1 3333344 345666
Q ss_pred EEEE
Q 018395 299 FSII 302 (356)
Q Consensus 299 ~~~~ 302 (356)
+.+.
T Consensus 120 ~~i~ 123 (232)
T 1zyb_A 120 VCIS 123 (232)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6664
No 305
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=79.24 E-value=6 Score=32.97 Aligned_cols=36 Identities=25% Similarity=0.276 Sum_probs=31.7
Q ss_pred CeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEE
Q 018395 245 ALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFI 280 (356)
Q Consensus 245 A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~v 280 (356)
+..+.+|++|.+++...+++|+...-..+.+||+|=
T Consensus 17 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 17 ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFG 52 (195)
T ss_dssp CCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEec
Confidence 567999999999999999999887777899999884
No 306
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=79.22 E-value=6.1 Score=33.66 Aligned_cols=75 Identities=16% Similarity=0.093 Sum_probs=51.1
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEE-----cCCcEEEEeeCCCCeEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIV-----PRFYVVSKIADPDGLAWF 299 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vv-----P~g~~h~~~~~~~~~~~~ 299 (356)
+....+.+|-+.----- . +..+.+|++|.+++...+++|+...-..+.+||+|=. ..-+.+...+ .++++++
T Consensus 29 ~~~~~~~~g~~i~~~G~-~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A-~~~~~v~ 105 (227)
T 3d0s_A 29 LQPVDFPRGHTVFAEGE-P-GDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATT-ITEVRAV 105 (227)
T ss_dssp SCEEEECTTCEEECTTC-C-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEE-SSCEEEE
T ss_pred CeEEEeCCCCEEEcCCC-c-CCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEE-cccEEEE
Confidence 45677888877633222 2 5679999999999999999998877779999998831 1222333334 3456666
Q ss_pred EEE
Q 018395 300 SII 302 (356)
Q Consensus 300 ~~~ 302 (356)
.+.
T Consensus 106 ~i~ 108 (227)
T 3d0s_A 106 SMD 108 (227)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 307
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=78.97 E-value=6.7 Score=34.14 Aligned_cols=76 Identities=12% Similarity=-0.003 Sum_probs=52.9
Q ss_pred eeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEE--cCCcEEEEeeCCCCeEEEEE
Q 018395 224 GADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIV--PRFYVVSKIADPDGLAWFSI 301 (356)
Q Consensus 224 s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vv--P~g~~h~~~~~~~~~~~~~~ 301 (356)
.+....+.+|.+.-.--- . +..+.+|++|.+++...+++|+..+-..+.+||+|=. -..+.++..+ .++++++.+
T Consensus 31 ~~~~~~~~~g~~i~~~G~-~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A-~~~~~v~~i 107 (250)
T 3e6c_C 31 MGLIRDFAKGSAVIMPGE-E-ITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATA-MEPTRTCWF 107 (250)
T ss_dssp GSEEEEECTTCEEECTTC-C-CCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEE-SSSEEEEEE
T ss_pred hCeEEEECCCCEEECCCC-C-CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEE-cccEEEEEE
Confidence 356778888877643322 2 5679999999999999999998877788999999842 2223444344 345666665
Q ss_pred E
Q 018395 302 I 302 (356)
Q Consensus 302 ~ 302 (356)
-
T Consensus 108 ~ 108 (250)
T 3e6c_C 108 S 108 (250)
T ss_dssp C
T ss_pred c
Confidence 3
No 308
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=78.97 E-value=7.6 Score=32.74 Aligned_cols=75 Identities=12% Similarity=0.122 Sum_probs=51.5
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEE-------cCCcEEEEeeCCCCeE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIV-------PRFYVVSKIADPDGLA 297 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vv-------P~g~~h~~~~~~~~~~ 297 (356)
+....+.+|-+.-..=. . +..+.+|++|.+++...+++|+...-..+.+||++.+ ..-+.+...+ .++++
T Consensus 26 ~~~~~~~~g~~i~~~G~-~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a-~~~~~ 102 (220)
T 3dv8_A 26 LITQHVKKGTIIHNGNM-D-CTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEA-EKDTD 102 (220)
T ss_dssp CEEEEECTTCEEEEGGG-C-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEE-SSCEE
T ss_pred CceEEeCCCCEEECCCC-C-cceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEE-eeeeE
Confidence 45678888887643322 2 5689999999999999999998877778999999632 1122223333 34666
Q ss_pred EEEEE
Q 018395 298 WFSII 302 (356)
Q Consensus 298 ~~~~~ 302 (356)
++.+.
T Consensus 103 ~~~i~ 107 (220)
T 3dv8_A 103 LWIIP 107 (220)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66664
No 309
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=78.73 E-value=5 Score=33.29 Aligned_cols=52 Identities=10% Similarity=-0.128 Sum_probs=39.5
Q ss_pred EEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEE
Q 018395 40 AKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIA 91 (356)
Q Consensus 40 ~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~ 91 (356)
...++++|.....---.++.+++|++|.+++...+++|++. ...+.+||++-
T Consensus 31 ~~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 31 QLKKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred EEEEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 46778888765433236789999999999999888777654 45679999985
No 310
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=77.93 E-value=5.1 Score=34.27 Aligned_cols=54 Identities=9% Similarity=0.068 Sum_probs=40.6
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFI 280 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~v 280 (356)
+....+.+|-+.-.-=- . +..+.+|++|.+++...+++|+...-..+.+||+|=
T Consensus 29 ~~~~~~~~g~~i~~~G~-~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 29 VTERNFQPDELVVEQDA-E-GEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp EEEEEECTTCBCCCTTC-T-TTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred cEEEEECCCCEEEeCCC-C-CCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 45677888877643322 2 567999999999999999999887778999999973
No 311
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=77.43 E-value=8 Score=34.02 Aligned_cols=75 Identities=17% Similarity=0.107 Sum_probs=51.1
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEc-----C-CcEEEEeeCCCCeEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVP-----R-FYVVSKIADPDGLAW 298 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP-----~-g~~h~~~~~~~~~~~ 298 (356)
+....+.+|.+.-.-=- . +..+.+|++|.+++...+++|+...-..+.+||+|=.. . .+.....+ .+++++
T Consensus 69 ~~~~~~~~ge~i~~~G~-~-~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A-~~~~~l 145 (260)
T 3kcc_A 69 CHIHKYPSKSTLIHQGE-K-AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRA-KTACEV 145 (260)
T ss_dssp SEEEEECTTCEEECTTC-B-CCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEE-SSCEEE
T ss_pred CEEEEECCCCEEECCCC-c-CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEE-CCCeEE
Confidence 46677788877633222 2 56899999999999999999988777899999998322 1 12223333 345666
Q ss_pred EEEE
Q 018395 299 FSII 302 (356)
Q Consensus 299 ~~~~ 302 (356)
+.+.
T Consensus 146 ~~i~ 149 (260)
T 3kcc_A 146 AEIS 149 (260)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6664
No 312
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=77.36 E-value=8.3 Score=30.89 Aligned_cols=52 Identities=13% Similarity=-0.057 Sum_probs=38.6
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLF 279 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~ 279 (356)
+....+.+|-+.--. .-. +..+.+|++|.+++.. +++|+...-..+.+||+|
T Consensus 61 ~~~~~~~~g~~i~~~-G~~-~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVIDQ-GDD-GDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEECT-TSC-CCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEeC-CCC-CcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 455677777765322 223 6789999999999998 778877666789999966
No 313
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=77.27 E-value=2.7 Score=38.63 Aligned_cols=72 Identities=11% Similarity=-0.016 Sum_probs=43.7
Q ss_pred eeEEEEecCCCeecccccccCCeeEEEEEeceEEEE--EEccCCceEE-----EEEecCCcEEEEcCCcEEEEe-eCCC-
Q 018395 224 GADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQ--IVGPDGKRVL-----ETTVKAGNLFIVPRFYVVSKI-ADPD- 294 (356)
Q Consensus 224 s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~--iv~~~g~~~~-----~~~l~~Gdv~vvP~g~~h~~~-~~~~- 294 (356)
.+.|++|.|||...||--+. ++.....|..|+- ++++.+ ..| ...+++|+++++=...+|+.. .|+.
T Consensus 92 ~~vRlrL~PG~~I~~HrD~~---~l~~~~~~~~RlHIPL~Tnp~-~~f~vdg~~~~m~~GE~w~~d~~~~H~v~N~g~~~ 167 (290)
T 1e5r_A 92 QMARSRNLKNAIVIPHRDFV---ELDREVDRYFRTFMVLEDSPL-AFHSNEDTVIHMRPGEIWFLDAATVHSAVNFSEIS 167 (290)
T ss_dssp EEEEEEEEESEEEEEECCC-----------CBCCEEEECSCCTT-EEEEETTEEECCCTTEEEECCTTSCEEEEESSSSC
T ss_pred heEEEEeCCCCEeeCccCcc---ccccccCCceEEEeeEecCCC-cEEEECCEEEecCCCCEEEEcCCCeeEEEcCCCCC
Confidence 56888999999998887552 3443445544433 333221 111 247999999999999999994 4654
Q ss_pred CeEEE
Q 018395 295 GLAWF 299 (356)
Q Consensus 295 ~~~~~ 299 (356)
...++
T Consensus 168 RIhLv 172 (290)
T 1e5r_A 168 RQSLC 172 (290)
T ss_dssp CCEEE
T ss_pred eEEEE
Confidence 34444
No 314
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=77.14 E-value=5.2 Score=33.50 Aligned_cols=72 Identities=13% Similarity=0.063 Sum_probs=47.9
Q ss_pred EEEecCCCeecccccccCC--eeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEE----cCCcEEEEeeCCCCeEEEE
Q 018395 227 LVRLDGKAMCSPGFSCDSA--LQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIV----PRFYVVSKIADPDGLAWFS 300 (356)
Q Consensus 227 ~v~l~~g~~~~PH~h~~~A--~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vv----P~g~~h~~~~~~~~~~~~~ 300 (356)
...+.+|-+.-..-. . + ..+.+|++|.+++...+++|+..+-..+.+||+|=. ...+.+...+ -++++++.
T Consensus 7 ~~~~~~g~~i~~~g~-~-~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A-~~~~~v~~ 83 (202)
T 2zcw_A 7 TVSFKAGDVILYPGV-P-GPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEA-ATDVRLEP 83 (202)
T ss_dssp CEEECTTCEEECSBS-C-CTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEE-SSCEEEEE
T ss_pred EEEECCCCEEECCCC-C-CCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEE-cccEEEEE
Confidence 456777776532221 2 4 579999999999999999998877788999998743 1122333333 34566666
Q ss_pred E
Q 018395 301 I 301 (356)
Q Consensus 301 ~ 301 (356)
+
T Consensus 84 i 84 (202)
T 2zcw_A 84 L 84 (202)
T ss_dssp C
T ss_pred E
Confidence 5
No 315
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=77.14 E-value=5.6 Score=33.48 Aligned_cols=52 Identities=8% Similarity=-0.074 Sum_probs=40.1
Q ss_pred EEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEE
Q 018395 40 AKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIA 91 (356)
Q Consensus 40 ~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~ 91 (356)
...++++|......-..++.+++|++|.+.+...+++|++. ...+.+||++-
T Consensus 23 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 75 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFG 75 (216)
T ss_dssp EEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEEC
T ss_pred eEEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 46778888866443336789999999999999887777643 57889999884
No 316
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=77.11 E-value=6.5 Score=32.80 Aligned_cols=53 Identities=11% Similarity=0.053 Sum_probs=39.4
Q ss_pred EEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEEe
Q 018395 40 AKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIAL 92 (356)
Q Consensus 40 ~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~i 92 (356)
...++++|.....---.++.+++|++|.+.+...+++|++. ...+.+||++-.
T Consensus 14 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~ 67 (207)
T 2oz6_A 14 HRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGE 67 (207)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESC
T ss_pred ceEEECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCccc
Confidence 45677888765432236788999999999998887766553 568899998843
No 317
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=77.10 E-value=18 Score=30.53 Aligned_cols=72 Identities=13% Similarity=-0.003 Sum_probs=51.0
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSII 302 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~ 302 (356)
+....+.+|-+.---=. . +..+.+|++|.+++. .+++|+...-..+.+||+|= ..+.+...+ .++++++.+.
T Consensus 23 ~~~~~~~~g~~i~~~g~-~-~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A-~~~~~v~~i~ 94 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGEG-D-ENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC--MHSGCLVEA-TERTEVRFAD 94 (222)
T ss_dssp CEEEEECTTCEEECTTC-C-CCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE--SCSSCEEEE-SSCEEEEEEC
T ss_pred CcEEEECCCCEEECCCC-C-CCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec--CCCCEEEEE-ccceEEEEEe
Confidence 56778888887633222 2 567999999999995 88888877677899999987 334444444 3456666663
No 318
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=76.56 E-value=2.8 Score=33.15 Aligned_cols=52 Identities=15% Similarity=0.240 Sum_probs=36.4
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~ 90 (356)
+...++++|..+..--..++.+++|++|.+.+...++++++. ...+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 457788888866443336788999999999998766655432 4678899987
No 319
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=76.40 E-value=9.5 Score=32.28 Aligned_cols=72 Identities=15% Similarity=0.078 Sum_probs=50.6
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSII 302 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~ 302 (356)
+....+.+|-+.----. . +..+.+|++|.+++ ..+++|+...-..+.+||+|=-|. .+...+ .++++++.+.
T Consensus 27 ~~~~~~~~g~~i~~~g~-~-~~~~y~i~~G~v~~-~~~~~G~~~~~~~~~~G~~~G~~~--~~~~~A-~~~~~v~~i~ 98 (220)
T 2fmy_A 27 FREQRYSKKAILYTPNT-E-RNLVFLVKSGRVRV-YLAYEDKEFTLAILEAGDIFCTHT--RAFIQA-MEDTTILYTD 98 (220)
T ss_dssp SEEEEECTTCEEECTTC-S-SCEEEEEEESEEEE-EEECSSCEEEEEEEETTCEEESCS--SSEEEE-SSSEEEEEEE
T ss_pred hheeEeCCCCEEECCCC-C-CCeEEEEEecEEEE-EECCCCCEEEEEEcCCCCEeCCcc--ceEEEE-cCcEEEEEEe
Confidence 56678888887632222 2 56899999999999 588888877777899999987632 233334 3457776664
No 320
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=76.34 E-value=5.2 Score=36.90 Aligned_cols=59 Identities=14% Similarity=0.164 Sum_probs=41.5
Q ss_pred cCceEEEEEEecCCCcccCeeeCCC-EEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEE
Q 018395 34 QGNIGAAKLALEKNGFALPHYCDSA-RVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWY 101 (356)
Q Consensus 34 ~~~~~~~~~~l~Pg~~~~pH~h~a~-e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~ 101 (356)
+..+++.++++.+.... ..++. .++.|++| +++.. ++. ...|++||++++|++...+..
T Consensus 227 ~~~F~v~~~~~~~~~~~---~~~~~~~il~v~~G-~~i~~---~~~--~~~l~~G~~~~ipa~~~~~~i 286 (300)
T 1zx5_A 227 TENFGLEVVDVTGTAEI---KTGGVMNILYAAEG-YFILR---GKE--TADLHRGYSCLVPASTDSFTV 286 (300)
T ss_dssp CSSEEEEEEEEEEEEEE---ECCSBCEEEEEEES-CEEEE---SSS--EEEECTTCEEEECTTCCEEEE
T ss_pred CCeEEEEEEEECCceEE---ecCCceEEEEEccc-EEEEe---CCe--EEEEccceEEEEeCCCceEEE
Confidence 34577788888753221 11666 89999999 98865 232 368999999999999854444
No 321
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=76.05 E-value=5.1 Score=34.28 Aligned_cols=75 Identities=15% Similarity=0.096 Sum_probs=46.5
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEE-----cCCcEEEEeeCCCCeEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIV-----PRFYVVSKIADPDGLAWF 299 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vv-----P~g~~h~~~~~~~~~~~~ 299 (356)
+....+.+|-+.----. . +..+.+|++|.+++...+++|+..+-..+.+||+|=. ..-+.+...+ .++++++
T Consensus 33 ~~~~~~~~g~~i~~~g~-~-~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A-~~~~~v~ 109 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGD-I-PNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIA-VENSKVL 109 (232)
T ss_dssp CEEEEECTTCEEECTTC-C-CCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEE-SSCEEEE
T ss_pred CeEEEECCCCEEEeCCC-C-CCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEE-ecceEEE
Confidence 56678888887643222 2 5679999999999999998888766778999998821 1122333344 3456666
Q ss_pred EEE
Q 018395 300 SII 302 (356)
Q Consensus 300 ~~~ 302 (356)
.+.
T Consensus 110 ~i~ 112 (232)
T 2gau_A 110 AIP 112 (232)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 322
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=75.50 E-value=5.9 Score=33.99 Aligned_cols=52 Identities=12% Similarity=0.121 Sum_probs=39.9
Q ss_pred EEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEE
Q 018395 40 AKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIA 91 (356)
Q Consensus 40 ~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~ 91 (356)
...++++|..+..---.++.+++|++|.+.+...+++|++. ...+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 87 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFG 87 (237)
T ss_dssp EEEEECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEEC
T ss_pred EEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEec
Confidence 56788888866433336788999999999999887777654 46789999884
No 323
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=75.16 E-value=6.6 Score=32.88 Aligned_cols=52 Identities=17% Similarity=0.147 Sum_probs=39.6
Q ss_pred EEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEE
Q 018395 40 AKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIA 91 (356)
Q Consensus 40 ~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~ 91 (356)
...++++|......--.++.+++|++|...+...+++|++. ...+.+||++-
T Consensus 20 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 72 (210)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred EEEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 46778888765443336789999999999998887777654 46789999984
No 324
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=74.55 E-value=9.4 Score=34.84 Aligned_cols=80 Identities=8% Similarity=0.045 Sum_probs=48.5
Q ss_pred ccCceEEEEEEecCCCc---ccCeee-CCCEEEEEEe----CeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEEEecC
Q 018395 33 RQGNIGAAKLALEKNGF---ALPHYC-DSARVAYVLQ----GSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWWYNKE 104 (356)
Q Consensus 33 ~~~~~~~~~~~l~Pg~~---~~pH~h-~a~e~~yVl~----G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g 104 (356)
+...+-++.-.+.||+. .+||.| +..|.+|--+ |. .+.++...+..+...++-||++.+|..++|.- .|
T Consensus 176 ~~~qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gf-v~q~~g~p~Etrhi~V~n~daVlvP~wh~h~~--~G 252 (282)
T 1xru_A 176 ETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDAC-VFHMMGQPQETRHIVMHNEQAVISPSWSIHSG--VG 252 (282)
T ss_dssp CCSSCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCC-EEEEEEETTEEEEEEECSSEEEEECTTCEEEE--EE
T ss_pred chhhEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCE-EEEEeCCCCCeeEEEEECCCEEEeCCCCCCCC--CC
Confidence 33456678888989874 489999 4445444433 33 34444332333345779999999996566653 34
Q ss_pred CCcEEEEEEee
Q 018395 105 DTELVVLFLGD 115 (356)
Q Consensus 105 ~e~l~~l~i~~ 115 (356)
-+...+|.+.-
T Consensus 253 ~~~Y~ylwvMA 263 (282)
T 1xru_A 253 TKAYTFIWGMV 263 (282)
T ss_dssp SSCCEEEEEEE
T ss_pred ccceEEEEEEE
Confidence 44444555543
No 325
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=74.53 E-value=6.3 Score=32.84 Aligned_cols=52 Identities=15% Similarity=0.088 Sum_probs=40.0
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~ 90 (356)
+...++++|..+..---.++.+++|++|.+.+....++|++. ...+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 456788888866443336789999999999998887777543 5688999987
No 326
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=74.07 E-value=8.2 Score=32.78 Aligned_cols=52 Identities=12% Similarity=0.021 Sum_probs=40.4
Q ss_pred EEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEE
Q 018395 40 AKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIA 91 (356)
Q Consensus 40 ~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~ 91 (356)
...++++|......--.++.+++|++|...+...+++|++. ...+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 56788888866443336789999999999999888777654 46789999985
No 327
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=73.64 E-value=8.1 Score=32.85 Aligned_cols=52 Identities=12% Similarity=0.178 Sum_probs=39.7
Q ss_pred EEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEE
Q 018395 40 AKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIA 91 (356)
Q Consensus 40 ~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~ 91 (356)
...++++|..+..---.++.+++|++|...+...+++|++. ...+.+||++-
T Consensus 30 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 82 (227)
T 3d0s_A 30 QPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFG 82 (227)
T ss_dssp CEEEECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEe
Confidence 46788888866433336788999999999998887776554 56889999884
No 328
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=73.61 E-value=7.4 Score=31.21 Aligned_cols=51 Identities=6% Similarity=-0.080 Sum_probs=36.8
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCce-EEEEEcCCCEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEE-KVVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~-~~~~l~~GDv~ 90 (356)
+...++++|..+..---.++.+++|++|.+.+.. ..+|++ ....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEeCCCCCcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 3567888888654333378899999999999987 555543 34678889966
No 329
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=73.18 E-value=9.2 Score=33.32 Aligned_cols=65 Identities=20% Similarity=0.072 Sum_probs=45.6
Q ss_pred EEEEEEecCCCcccCeee-CC--CEEEEEEe--CeEEEEEEcCCC------------------ceEEEEEcCCCEEEeCC
Q 018395 38 GAAKLALEKNGFALPHYC-DS--ARVAYVLQ--GSGVAGIVLPEK------------------EEKVVAIKKGDGIALPF 94 (356)
Q Consensus 38 ~~~~~~l~Pg~~~~pH~h-~a--~e~~yVl~--G~~~~~vv~~~~------------------~~~~~~l~~GDv~~iP~ 94 (356)
.+-....++|+...+|.| ++ .-++|+-. +.|.+.+.++.. ......-++||+++||+
T Consensus 104 ~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS 183 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWES 183 (216)
T ss_dssp EEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEET
T ss_pred eEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECC
Confidence 355678899999999999 43 23455544 346666666521 11135679999999999
Q ss_pred CcEEEEEe
Q 018395 95 GVVTWWYN 102 (356)
Q Consensus 95 G~~H~~~N 102 (356)
-..|...-
T Consensus 184 ~l~H~V~p 191 (216)
T 2rg4_A 184 WLRHEVPM 191 (216)
T ss_dssp TSCEEECC
T ss_pred CCEEeccC
Confidence 99999864
No 330
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=73.04 E-value=6.8 Score=32.61 Aligned_cols=50 Identities=10% Similarity=0.023 Sum_probs=35.3
Q ss_pred EecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEEe
Q 018395 43 ALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIAL 92 (356)
Q Consensus 43 ~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~i 92 (356)
++++|.....--..++.+++|++|...+...+++|++. ...+.+||++-.
T Consensus 3 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge 53 (195)
T 3b02_A 3 RFARKETIYLRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGE 53 (195)
T ss_dssp EECTTCEEECTTSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECG
T ss_pred EcCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEech
Confidence 45555544322225778999999999998877776544 568899999854
No 331
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=72.15 E-value=6.8 Score=33.46 Aligned_cols=53 Identities=9% Similarity=0.081 Sum_probs=39.8
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIA 91 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~ 91 (356)
+...++++|..+..---.++.+++|++|...+...+++|++. ...+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 29 VTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp EEEEEECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred cEEEEECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 457788888866444336788999999999998887777654 46889999884
No 332
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=71.91 E-value=5.7 Score=33.70 Aligned_cols=52 Identities=15% Similarity=0.059 Sum_probs=40.2
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~ 90 (356)
+...++++|..+...-..++.+++|++|.+.+...+++|++. ...+.+||++
T Consensus 22 ~~~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQII 74 (213)
T ss_dssp SEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEES
T ss_pred cEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEe
Confidence 457888898876544336788999999999998887777654 4678999987
No 333
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=71.77 E-value=2.8 Score=39.95 Aligned_cols=26 Identities=27% Similarity=0.241 Sum_probs=23.1
Q ss_pred EEEEEcCCCEEEeCCCcEEEEEecCC
Q 018395 80 KVVAIKKGDGIALPFGVVTWWYNKED 105 (356)
Q Consensus 80 ~~~~l~~GDv~~iP~G~~H~~~N~g~ 105 (356)
.+..-++||.++||+|.+|.+.|..+
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~ 318 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHS 318 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSE
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccc
Confidence 45677999999999999999999864
No 334
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=71.33 E-value=9.1 Score=33.17 Aligned_cols=53 Identities=19% Similarity=0.176 Sum_probs=40.9
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIA 91 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~ 91 (356)
+...++++|..+..---.++.+++|++|.+.+...+++|++. ...+.+||++-
T Consensus 43 ~~~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G 96 (243)
T 3la7_A 43 PVVETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFG 96 (243)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEES
T ss_pred heeEEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEc
Confidence 447788888876443336789999999999999888877654 46789999874
No 335
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=70.88 E-value=24 Score=30.33 Aligned_cols=71 Identities=11% Similarity=0.074 Sum_probs=46.7
Q ss_pred eeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEE-----EEEecCCcEEEEcCCcEEEEeeCCCCeEE
Q 018395 224 GADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVL-----ETTVKAGNLFIVPRFYVVSKIADPDGLAW 298 (356)
Q Consensus 224 s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~-----~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~ 298 (356)
++....|.||+-..||..+. ...+ +.-++++.|.....+ ....++|+.++|=-.+.|...|..+...+
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~-n~~l------R~HL~L~~p~~~~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~Rv 175 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPT-NCRL------RMHLGLVIPKEGCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRL 175 (197)
T ss_dssp EEEEEEECTTEEEEEECCSC-TTEE------EEEEEEECCSSSEEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEE
T ss_pred eEEEEEeCCCCCcCCeeCCC-CCeE------EEEEEEEeCCCCcEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEE
Confidence 46778999999999999886 4333 334445554411111 23789999999999999999553333333
Q ss_pred EEE
Q 018395 299 FSI 301 (356)
Q Consensus 299 ~~~ 301 (356)
+-+
T Consensus 176 vL~ 178 (197)
T 3rcq_A 176 IFI 178 (197)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 336
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=70.86 E-value=6.1 Score=34.02 Aligned_cols=53 Identities=9% Similarity=-0.012 Sum_probs=40.2
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIA 91 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~ 91 (356)
+...++++|..+..---.++.+++|++|.+.+...+++|++. ...+.+||++-
T Consensus 43 ~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG 96 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIE 96 (232)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEEC
T ss_pred cEEEEECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeee
Confidence 567888888866443336788999999999998777666544 46789999874
No 337
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=70.70 E-value=9.2 Score=33.62 Aligned_cols=52 Identities=17% Similarity=0.147 Sum_probs=40.0
Q ss_pred EEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEE
Q 018395 40 AKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIA 91 (356)
Q Consensus 40 ~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~ 91 (356)
...++++|..+..---.++.+++|++|...+...+++|++. ...+.+||++-
T Consensus 70 ~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~G 122 (260)
T 3kcc_A 70 HIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 122 (260)
T ss_dssp EEEEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred EEEEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEe
Confidence 56788888866433336788999999999999887777654 56789999984
No 338
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=70.68 E-value=9.2 Score=32.19 Aligned_cols=51 Identities=16% Similarity=0.027 Sum_probs=39.4
Q ss_pred EEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEE
Q 018395 40 AKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGI 90 (356)
Q Consensus 40 ~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~ 90 (356)
...++++|......-..++.+++|++|...+...+++|++. ...+.+||++
T Consensus 27 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 78 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMC 78 (220)
T ss_dssp EEEEECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred ceEEeCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCee
Confidence 46788888866433336789999999999999888877654 4678999996
No 339
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=70.58 E-value=8.7 Score=33.12 Aligned_cols=73 Identities=5% Similarity=-0.030 Sum_probs=46.6
Q ss_pred EEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCC---Cc----EEEEEecCCCcEEEEE
Q 018395 40 AKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPF---GV----VTWWYNKEDTELVVLF 112 (356)
Q Consensus 40 ~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~---G~----~H~~~N~g~e~l~~l~ 112 (356)
...++++|..+..---.++.+++|++|.+.+...+++|++....+-+||++-... +. .+...... ++.+++.
T Consensus 19 ~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v~~ 97 (238)
T 2bgc_A 19 KPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVIS-EQATAYV 97 (238)
T ss_dssp CCEEEETTCEEECTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEEESSEEEESBCTTTCCBSCCCEEEECS-SEEEEEE
T ss_pred eEEEECCCCEEEeCCCCCceEEEEEecEEEEEEECCCCCEEEEEEcCCCEecchhhhcCCCcCcceeEEEEE-cceEEEE
Confidence 3567777776632222678899999999999988887776543333999885442 22 34444443 4566665
Q ss_pred E
Q 018395 113 L 113 (356)
Q Consensus 113 i 113 (356)
+
T Consensus 98 i 98 (238)
T 2bgc_A 98 I 98 (238)
T ss_dssp E
T ss_pred E
Confidence 4
No 340
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=70.05 E-value=8.2 Score=32.25 Aligned_cols=71 Identities=14% Similarity=0.032 Sum_probs=46.0
Q ss_pred EEEecCCCcccCeeeCC--CEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEEe----CCCcEEEEEecCCCcEEEEEE
Q 018395 41 KLALEKNGFALPHYCDS--ARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIAL----PFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 41 ~~~l~Pg~~~~pH~h~a--~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~i----P~G~~H~~~N~g~e~l~~l~i 113 (356)
..++++|..+...-..+ +.+++|++|...+...+++|++. ...+.+||++-. ..-..+.+... ++.+++.+
T Consensus 7 ~~~~~~g~~i~~~g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~--~~~~v~~i 84 (202)
T 2zcw_A 7 TVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAA--TDVRLEPL 84 (202)
T ss_dssp CEEECTTCEEECSBSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEES--SCEEEEEC
T ss_pred EEEECCCCEEECCCCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEc--ccEEEEEE
Confidence 45677777554333356 78999999999998887777654 467899998854 11233344443 34566655
No 341
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=69.14 E-value=38 Score=26.30 Aligned_cols=71 Identities=17% Similarity=0.184 Sum_probs=52.0
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFSII 302 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~~~ 302 (356)
....-+.||- .+-++.+. +.|+.=|++|+.++.+-....= .++++|+-|.||++.-.-+.. .+...++|.+
T Consensus 39 kTlGVm~PGe-~~YtF~T~-~~E~MevvsG~l~V~Lpg~~eW----~~~~aGesF~VpanssF~lkv-~~~~~Y~C~y 109 (111)
T 3hqx_A 39 KTLGVILPTE-QPLTFETH-VPERMEIISGECRVKIADSTES----ELFRAGQSFYVPGNSLFKIET-DEVLDYVCHL 109 (111)
T ss_dssp EEEEEECCCS-SCEEEECS-SCEEEEEEESEEEEEETTCSSC----EEEETTCEEEECTTCEEEEEC-SSCEEEEEEE
T ss_pred EEEEEEeccc-cceEEcCC-CcEEEEEEEeEEEEEcCCcccC----EEeCCCCEEEECCCCcEEEEE-CcceeEEEEc
Confidence 3444567773 11467887 9999999999999998876531 368899999999887766543 4677777743
No 342
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=68.85 E-value=6.2 Score=33.76 Aligned_cols=53 Identities=9% Similarity=-0.087 Sum_probs=36.5
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCce-EEEEEcCCCEEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEE-KVVAIKKGDGIA 91 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~-~~~~l~~GDv~~ 91 (356)
+...++++|..+..---.++.+++|++|...+...+++|++ ....+.+||++-
T Consensus 33 ~~~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 86 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFG 86 (232)
T ss_dssp CEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEES
T ss_pred CeEEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEee
Confidence 45778888886644333678899999999999877665544 357889999873
No 343
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=67.74 E-value=11 Score=32.63 Aligned_cols=53 Identities=11% Similarity=0.105 Sum_probs=41.2
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIA 91 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~ 91 (356)
+...++++|..+..---.++.+++|++|.+.+...+++|++. ...+.+||++-
T Consensus 32 ~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIG 85 (250)
T ss_dssp SEEEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CeEEEECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 457788888866443336788999999999999888777654 46789999985
No 344
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=67.72 E-value=9.7 Score=34.67 Aligned_cols=52 Identities=12% Similarity=0.003 Sum_probs=40.0
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~ 90 (356)
+...++++|..+..---.++.+++|++|.+.+....+++++....+.+||++
T Consensus 36 ~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 36 VQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp CEEEEECTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred CeEEEECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 3567788877553332367889999999999988887777667888999987
No 345
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=67.29 E-value=17 Score=30.79 Aligned_cols=70 Identities=17% Similarity=0.071 Sum_probs=47.6
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
+...++++|..+..--..++.+++|++|.+.+. ..++|++. ...+.+||++- ....+.+.... +++++.+
T Consensus 23 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~~--~~~v~~i 93 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC--MHSGCLVEATE--RTEVRFA 93 (222)
T ss_dssp CEEEEECTTCEEECTTCCCCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE--SCSSCEEEESS--CEEEEEE
T ss_pred CcEEEECCCCEEECCCCCCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec--CCCCEEEEEcc--ceEEEEE
Confidence 457888888876443336778999999999996 66666544 46889999998 33344444433 4556554
No 346
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=67.16 E-value=30 Score=31.20 Aligned_cols=81 Identities=15% Similarity=0.147 Sum_probs=59.5
Q ss_pred CcEEEEeCCCCCCCccccCceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcC
Q 018395 204 GGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPR 283 (356)
Q Consensus 204 gG~~~~~~~~~~p~l~~l~~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~ 283 (356)
.|..+.++- .+-|-|-.+|.+.|+=-++|-.|.- -.| .||++|+..++ + ..|.+|.-.++|+
T Consensus 78 ~gs~RlLs~------~d~GaSTl~V~fpp~~~~P~Gi~~a-d~E-~fVL~G~i~~G-----~-----~~l~~h~Y~f~Pa 139 (303)
T 2qdr_A 78 PGSRRLLTW------HDSGASTSRVVLPPKFEAPSGIFTA-DLE-IFVIKGAIQLG-----E-----WQLNKHSYSFIPA 139 (303)
T ss_dssp CEEEEEEEE------CTTSCEEEEEEECTTCEECCBEESS-CEE-EEEEESEEEET-----T-----EEECTTEEEEECT
T ss_pred ccceeeccc------CCCCcceEEEEecCCCCCCCccccc-ceE-EEEEEeEEEeC-----C-----EEecCCceEEecC
Confidence 455555542 3447888899999998888888875 556 99999998653 2 2488999999999
Q ss_pred CcE--EEEeeCCCCeEEEEEE
Q 018395 284 FYV--VSKIADPDGLAWFSII 302 (356)
Q Consensus 284 g~~--h~~~~~~~~~~~~~~~ 302 (356)
|.. -++.-|.++++++-|.
T Consensus 140 GV~~~~~kv~~~~g~~iL~fe 160 (303)
T 2qdr_A 140 GVRIGSWKVLGGEEAEILWME 160 (303)
T ss_dssp TCCBCCEEEETTSCEEEEEEE
T ss_pred CCccCceeecCCCCcEEEEEe
Confidence 983 3334467888877773
No 347
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=66.11 E-value=9.2 Score=32.98 Aligned_cols=75 Identities=8% Similarity=0.022 Sum_probs=49.8
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcC----C---cEEEEeeCCCCeE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPR----F---YVVSKIADPDGLA 297 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~----g---~~h~~~~~~~~~~ 297 (356)
+....+.+|.+.---- -. +..+.+|++|.+++...+++|+..+-..+ +||+|--.. . +.+...+-.++++
T Consensus 18 ~~~~~~~~ge~i~~~G-~~-~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~~~~~ 94 (238)
T 2bgc_A 18 IKPKQFHKKELIFNQW-DP-QEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVISEQAT 94 (238)
T ss_dssp CCCEEEETTCEEECTT-CC-CCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECSSEEE
T ss_pred ceEEEECCCCEEEeCC-CC-CceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEEcceE
Confidence 4556677777763222 22 56799999999999999999987666667 999984432 2 1334444335677
Q ss_pred EEEEE
Q 018395 298 WFSII 302 (356)
Q Consensus 298 ~~~~~ 302 (356)
++.+.
T Consensus 95 v~~i~ 99 (238)
T 2bgc_A 95 AYVIK 99 (238)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77664
No 348
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=66.08 E-value=25 Score=29.56 Aligned_cols=70 Identities=13% Similarity=0.089 Sum_probs=47.3
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEEeCCCcEEEEEecCCCcEEEEEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIALPFGVVTWWYNKEDTELVVLFL 113 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~iP~G~~H~~~N~g~e~l~~l~i 113 (356)
+...++++|..+..--..++.+++|++|...+. ..++|++. ...+.+||++-.|. .+.+... +++.++.+
T Consensus 27 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~~G~~~--~~~~~A~--~~~~v~~i 97 (220)
T 2fmy_A 27 FREQRYSKKAILYTPNTERNLVFLVKSGRVRVY-LAYEDKEFTLAILEAGDIFCTHT--RAFIQAM--EDTTILYT 97 (220)
T ss_dssp SEEEEECTTCEEECTTCSSCEEEEEEESEEEEE-EECSSCEEEEEEEETTCEEESCS--SSEEEES--SSEEEEEE
T ss_pred hheeEeCCCCEEECCCCCCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEeCCcc--ceEEEEc--CcEEEEEE
Confidence 457788888876443336788999999999994 66666544 47889999997732 3334443 34556554
No 349
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=64.22 E-value=18 Score=27.91 Aligned_cols=67 Identities=13% Similarity=0.183 Sum_probs=48.0
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEEeeCCCCeEEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSKIADPDGLAWFS 300 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~~~~~~~~~~~~ 300 (356)
....-+.|| +-++.+. +.|+.=|++|+.++.+-....= .++++|+-|.||++.-.-+.. .+...++|
T Consensus 38 kTlGVm~PG---eY~F~T~-~~E~MevvsG~l~V~LpG~~eW----~~~~aGesF~VpanssF~lkv-~~~t~Y~C 104 (106)
T 3eo6_A 38 HSLTLLHPG---VYTLSSE-VAETIRVLSGMAYYHAEGANDV----QELHAGDSMVIPANQSYRLEV-MEPLDYLL 104 (106)
T ss_dssp EEEEEECSE---EEEECCS-SCEEEEEEEEEEEEECTTCSSC----EEEETTCEEEECSSSCEEEEE-EEEEEEEE
T ss_pred EEEEEEeee---EEEecCC-CcEEEEEEEeEEEEECCCCccC----EEECCCCEEEECCCCcEEEEE-CceEEEEE
Confidence 344456777 4578888 9999999999999988765421 368899999999987655532 23455554
No 350
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=63.82 E-value=12 Score=31.19 Aligned_cols=49 Identities=8% Similarity=0.076 Sum_probs=36.3
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~ 90 (356)
+....+.||..+-.---.++.+++|++|.+.+.. ++|+ ....+.+||++
T Consensus 94 ~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQEGTFGDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECTTSCCSEEEEEEECCEEEEC--TTSC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEECCCcCcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEe
Confidence 4577888888664433367789999999998864 4554 55789999987
No 351
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=59.91 E-value=4.8 Score=34.24 Aligned_cols=54 Identities=24% Similarity=0.318 Sum_probs=40.7
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFI 280 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~v 280 (356)
+....+.+|-+.-..=. . +..+.+|++|.+++...+++|+...-..+.+||+|-
T Consensus 32 ~~~~~~~~g~~i~~~g~-~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 85 (227)
T 3dkw_A 32 SDLVNLDKGAYVFRQGE-P-AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFA 85 (227)
T ss_dssp CEEEECCTTEEEECTTS-B-CCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEES
T ss_pred CEEEEECCCCEEEcCCC-c-cceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 45667777776643322 2 567999999999999999988765556889999884
No 352
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=59.45 E-value=21 Score=28.19 Aligned_cols=48 Identities=8% Similarity=0.057 Sum_probs=35.1
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~ 90 (356)
+...++++|..+..--..++.+++|++|.+.+.. +++ ....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~---~~~-~~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV---NNE-WATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEESCEEEEE---TTE-EEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCCCCCeEEEEEecEEEEEE---CCE-EEEEecCCCEe
Confidence 4567888888664333368899999999999875 333 44678899886
No 353
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=59.22 E-value=5.8 Score=37.14 Aligned_cols=26 Identities=19% Similarity=0.224 Sum_probs=23.0
Q ss_pred EEEEcCCCEEEeCCCcEEEEEecCCC
Q 018395 81 VVAIKKGDGIALPFGVVTWWYNKEDT 106 (356)
Q Consensus 81 ~~~l~~GDv~~iP~G~~H~~~N~g~e 106 (356)
...=++||.+++++|..||.+|.|-.
T Consensus 280 r~~QkpGd~Vi~~PgayH~v~n~G~~ 305 (332)
T 2xxz_A 280 RFVQRPGDLVWINAGTVHWVQATGWC 305 (332)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSSE
T ss_pred EEEECCCCEEEECCCceEEEEeccee
Confidence 46779999999999999999999853
No 354
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=58.46 E-value=22 Score=27.87 Aligned_cols=49 Identities=16% Similarity=0.150 Sum_probs=35.3
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIA 91 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~ 91 (356)
+...++++|..+..---.++.+++|++|.+.+.. . ......+.+||++-
T Consensus 50 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~---~-~~~~~~~~~G~~fG 98 (160)
T 4f8a_A 50 FQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQ---D-DEVVAILGKGDVFG 98 (160)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEESEEEEEE---T-TEEEEEEETTCEEE
T ss_pred ceeeeeCCCCEEEeCCCCccEEEEEEeeEEEEEE---C-CEEEEEecCCCEeC
Confidence 3467788887654433368899999999999864 2 23457889999874
No 355
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=58.05 E-value=19 Score=31.70 Aligned_cols=52 Identities=15% Similarity=0.070 Sum_probs=38.7
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCc--eEEEEEcCCCEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKE--EKVVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~--~~~~~l~~GDv~ 90 (356)
+....+.+|..+...--.++.+++|++|++.+....++++ .....+.+||+|
T Consensus 180 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 4567788887665443477889999999999986655542 346789999988
No 356
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=57.48 E-value=28 Score=31.80 Aligned_cols=67 Identities=9% Similarity=0.003 Sum_probs=37.3
Q ss_pred ccCceEEEEEEecCCCc---ccCeee-CCCEEEEEEe--Ce-EEEEEEcCCCceEEEEEcCCCEEEeCCCcEEE
Q 018395 33 RQGNIGAAKLALEKNGF---ALPHYC-DSARVAYVLQ--GS-GVAGIVLPEKEEKVVAIKKGDGIALPFGVVTW 99 (356)
Q Consensus 33 ~~~~~~~~~~~l~Pg~~---~~pH~h-~a~e~~yVl~--G~-~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~ 99 (356)
....+-++.-.+.||+. .+||.| +..|.+|--+ .. ..+.++.+-+..+...++-||++.+|+|..|.
T Consensus 176 ~s~qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~v~h~~g~pdEtrh~~V~n~daVlvP~wgyHp 249 (289)
T 1ywk_A 176 ESCQLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRIFHMMGKPDETKHLVMSNEQAAISPSWSIHS 249 (289)
T ss_dssp CCSSCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCCEEEEESSTTSCEEEEECTTEEEEECTTSCCC
T ss_pred chheEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCeEEEECCCCCceEEEEEECCCEEEeCCCcccC
Confidence 33455677888889874 489999 5556665443 11 23333322222334678999999999998885
No 357
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=56.84 E-value=19 Score=30.10 Aligned_cols=48 Identities=6% Similarity=0.091 Sum_probs=35.0
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~ 90 (356)
+....+.||..+...--.++.+++|++|.+.+. .+++++ ..+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~--~~~g~~--~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVL--TKGNKE--MKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEECEEEEE--CTTSCC--EEEETTCEE
T ss_pred CCceEECCCCEEEECCCcCCeEEEEeccEEEEE--ECCCeE--EEEcCCCEe
Confidence 456788888876443336788999999998874 455543 478999987
No 358
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=55.29 E-value=14 Score=28.43 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=33.2
Q ss_pred EEEEEec-CCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEE
Q 018395 39 AAKLALE-KNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~-Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~ 90 (356)
+...++. +|..+..---.++.+++|++|.+.+. .++++. ..+.+||++
T Consensus 39 ~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~~--~~l~~G~~f 87 (134)
T 2d93_A 39 MIFEVVEQAGAIILEDGQELDSWYVILNGTVEIS--HPDGKV--ENLFMGNSF 87 (134)
T ss_dssp EEEEEECSSSCEEECTTCEECEEEECCBSCEEEE--CSSSCE--EEECTTCEE
T ss_pred heEEEecCCCCEEEeCCCCCCeEEEEEeCEEEEE--cCCCcE--EEecCCCcc
Confidence 4567788 77755332225678999999999886 345543 568888876
No 359
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=53.23 E-value=33 Score=26.33 Aligned_cols=48 Identities=13% Similarity=0.027 Sum_probs=34.3
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~ 90 (356)
+...++++|..+..---.++.+++|++|.+.+.. +++ ....+.+||++
T Consensus 46 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~---~g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 46 MYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVF 93 (139)
T ss_dssp CEEEEECSSCEEECTTSCCCEEEEEEECCEEEEE---TTE-EEEEECTTCEE
T ss_pred cEEEecCCCCEEEeCCCcCCEEEEEEeCEEEEEE---CCE-EEEEeCCCCEe
Confidence 3567788887654333368899999999998843 333 45788899886
No 360
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=52.98 E-value=23 Score=33.76 Aligned_cols=54 Identities=15% Similarity=-0.015 Sum_probs=40.8
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCc---eEEEEEcCCCEEEe
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKE---EKVVAIKKGDGIAL 92 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~---~~~~~l~~GDv~~i 92 (356)
+...++++|..+..---.++.+++|++|.+.+....++|+ .....+.+||++--
T Consensus 65 ~~~~~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 3567888887654333367889999999999988777664 35678999998854
No 361
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=51.90 E-value=5.6 Score=33.77 Aligned_cols=54 Identities=17% Similarity=0.228 Sum_probs=39.3
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EEEEcCCCEEEe
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VVAIKKGDGIAL 92 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~~l~~GDv~~i 92 (356)
+...++++|......-..++.+++|++|...+...+++|++. ...+.+||++-.
T Consensus 32 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~ 86 (227)
T 3dkw_A 32 SDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAE 86 (227)
T ss_dssp CEEEECCTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESC
T ss_pred CEEEEECCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeee
Confidence 356778888766443336788999999999998766655443 467889998853
No 362
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=51.74 E-value=30 Score=32.90 Aligned_cols=51 Identities=6% Similarity=-0.072 Sum_probs=37.1
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCc-eEEEEEcCCCEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKE-EKVVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~-~~~~~l~~GDv~ 90 (356)
+....+++|..+.-.-..++.+++|++|.+.+.. ..+++ .....+.+||+|
T Consensus 168 ~~~~~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~~-~~~G~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEECEEEEEE-ECSSCEEEEEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCCCCceEEEEEeeEEEEEE-ecCCCEEEEEEecCCCEE
Confidence 4567888888665444478899999999999876 44443 335678899876
No 363
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=50.67 E-value=54 Score=28.70 Aligned_cols=48 Identities=8% Similarity=0.057 Sum_probs=35.9
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~ 90 (356)
+....+++|..+...-..++.+++|++|...+.. ++ .....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~---~g-~~~~~l~~G~~f 109 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV---NN-EWATSVGEGGSF 109 (291)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEECCEEEEE---TT-EEEEEECTTCEE
T ss_pred ccEEEECCCCEEEeCCCCCceEEEEeeeEEEEEE---CC-eEEEEcCCCCcc
Confidence 3567888888765433478899999999998865 33 345788999987
No 364
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=49.41 E-value=27 Score=31.00 Aligned_cols=51 Identities=12% Similarity=0.126 Sum_probs=36.6
Q ss_pred EEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEc-CCCc-eEEEEEcCCCEE
Q 018395 40 AKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVL-PEKE-EKVVAIKKGDGI 90 (356)
Q Consensus 40 ~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~-~~~~-~~~~~l~~GDv~ 90 (356)
....+++|..+..---.++.+++|++|++.+.... ++++ .....+.+||+|
T Consensus 181 ~~~~~~~g~~I~~~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 181 EETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp EEEEECTTCEEECTTCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred cEEEECCCCEEEeCCCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 56677777765433335678999999999998765 3443 345789999987
No 365
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=47.38 E-value=22 Score=31.51 Aligned_cols=48 Identities=13% Similarity=0.027 Sum_probs=35.5
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~ 90 (356)
+...++++|..+.-.-..++.+++|++|.+.+.. ++ .....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~---~g-~~~~~~~~G~~f 109 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK---EG-VKLCTMGPGKVF 109 (299)
T ss_dssp CEEEEECTTCEEECTTCBCCCEEEEEESCEEEEE---TT-EEEEEECTTCEE
T ss_pred cCeEEECCCCEEEcCCCcCceEEEEEEEEEEEEE---CC-EEEEEeCCCCee
Confidence 4567888888665444478889999999998843 33 345788999987
No 366
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=46.92 E-value=49 Score=27.22 Aligned_cols=51 Identities=14% Similarity=0.149 Sum_probs=35.8
Q ss_pred ceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEE
Q 018395 223 CGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLF 279 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~ 279 (356)
..+....+.||-+.---= -. +..+.+|++|++++.. ++|+ .-..+.+||+|
T Consensus 92 ~~~~~~~~~~ge~I~~~G-~~-~~~ly~I~~G~v~~~~--~~g~--~~~~l~~G~~f 142 (198)
T 2ptm_A 92 TLLEFEVFQPADYVIQEG-TF-GDRMFFIQQGIVDIIM--SDGV--IATSLSDGSYF 142 (198)
T ss_dssp HHCEEEEECTTCEEECTT-SC-CSEEEEEEECCEEEEC--TTSC--EEEEECTTCEE
T ss_pred HhccceeeCCCCEEEECC-Cc-CcEEEEEEeCEEEEEe--cCCe--EEEEecCCCEe
Confidence 345677788887763222 22 5679999999998775 6665 34689999987
No 367
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=46.85 E-value=22 Score=27.02 Aligned_cols=53 Identities=21% Similarity=0.265 Sum_probs=32.5
Q ss_pred cCCCeecccccccCCeeEEEEE-eceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEE
Q 018395 231 DGKAMCSPGFSCDSALQVTYIV-RGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVS 288 (356)
Q Consensus 231 ~~g~~~~PH~h~~~A~ei~~v~-~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~ 288 (356)
+.||+..|-.... -.....|+ -|.++. +.+|++ ..-.++.||.+++++||.=.
T Consensus 21 T~gGI~LP~sake-Kp~~G~VvAVG~G~~---~~~G~~-~p~~VkvGD~Vlf~k~y~Gt 74 (97)
T 1pcq_O 21 SAGGIVLTGSAAA-KSTRGEVLAVGNGRI---LENGEV-KPLDVKVGDIVIFNDGYGVK 74 (97)
T ss_dssp TTTSSCCCCCCSC-CCCEEEEEEECSEEC---TTSSSC-EECSCCTTCEEEECCCSSCE
T ss_pred ccceEEeCccccc-CCcccEEEEEcCcee---cCCCCE-EecccCCCCEEEECCccCCe
Confidence 3577777754322 22333333 477753 556655 34479999999999965433
No 368
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=46.56 E-value=12 Score=37.37 Aligned_cols=26 Identities=19% Similarity=0.184 Sum_probs=23.1
Q ss_pred EEEEcCCCEEEeCCCcEEEEEecCCC
Q 018395 81 VVAIKKGDGIALPFGVVTWWYNKEDT 106 (356)
Q Consensus 81 ~~~l~~GDv~~iP~G~~H~~~N~g~e 106 (356)
...=++||.+++++|..||.+|.|-.
T Consensus 339 r~vQkpGd~Vi~~PgayH~v~n~G~~ 364 (531)
T 3avr_A 339 RFIQRPGDLVWINAGTVHWVQAIGWC 364 (531)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSSE
T ss_pred EEEECCCCEEEECCCceEEEEeccee
Confidence 46779999999999999999999853
No 369
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=46.01 E-value=1.9e+02 Score=26.99 Aligned_cols=80 Identities=14% Similarity=0.057 Sum_probs=48.1
Q ss_pred EEEeCCCCCCCcccCceEEEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCCcEEEE
Q 018395 21 YHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFGVVTWW 100 (356)
Q Consensus 21 i~~~~~~~~p~l~~~~~~~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~~H~~ 100 (356)
++.......|.+. ++....+++.-+....--.-.++.-+.|+.|+.++.+-.+++. -...|+++|..++-+.++|.|
T Consensus 320 Ye~AS~A~~phlP--dl~g~~l~Vd~~d~~~DL~d~ge~hY~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H~w 396 (443)
T 3g7d_A 320 YEAASMASAAHLP--DLVGSFLRVDADGRGADLIDHAENHYVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRHRW 396 (443)
T ss_dssp EEEEECCCCTTCT--TCEEEEEEEC------CBCCSSEEEEEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCEEE
T ss_pred eehhhhhccccCC--CceeEEEEecCCCcchhhhhcccceEEEecCceEEEecCCCCc-cceEECCCCceeecccccccc
Confidence 4444433334443 2333445554432222111124444559999999999767765 458999999999999999999
Q ss_pred Eec
Q 018395 101 YNK 103 (356)
Q Consensus 101 ~N~ 103 (356)
...
T Consensus 397 ~G~ 399 (443)
T 3g7d_A 397 HGT 399 (443)
T ss_dssp ESS
T ss_pred cCC
Confidence 843
No 370
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=45.97 E-value=18 Score=27.63 Aligned_cols=45 Identities=13% Similarity=0.082 Sum_probs=32.3
Q ss_pred EEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEE
Q 018395 40 AKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGI 90 (356)
Q Consensus 40 ~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~ 90 (356)
...++++|..+..--..++.+++|++|.+.+... + ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~--~----~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGEPGDRMFFVVEGSVSVATP--N----PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTSCCCEEEEEEESCEEECSS--S----CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCCCcceEEEEEeeEEEEEeC--C----cceECCCCEe
Confidence 5678888886644333678899999999988532 1 2467888875
No 371
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=44.78 E-value=31 Score=31.19 Aligned_cols=52 Identities=19% Similarity=0.183 Sum_probs=37.8
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLF 279 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~ 279 (356)
+....+.+|-+.---= -. +..+.+|++|.+++...+++|+. .-..+.+||+|
T Consensus 36 ~~~~~~~~g~~i~~~G-~~-~~~~y~i~~G~v~~~~~~~~g~~-~~~~~~~G~~f 87 (333)
T 4ava_A 36 VQPLRAAAGQVLLRQG-EP-AVSFLLISSGSAEVSHVGDDGVA-IIARALPGMIV 87 (333)
T ss_dssp CEEEEECTTCEEECTT-SB-CCCEEEEEECCEEEEEECTTCCE-EEEEECTTCEE
T ss_pred CeEEEECCCCEEEeCC-Cc-CCEEEEEEeeEEEEEEECCCCcE-EEEEecCCCEe
Confidence 3455666665542111 22 56799999999999999999876 55689999987
No 372
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=44.25 E-value=14 Score=36.55 Aligned_cols=25 Identities=20% Similarity=0.239 Sum_probs=22.6
Q ss_pred EEEEcCCCEEEeCCCcEEEEEecCC
Q 018395 81 VVAIKKGDGIALPFGVVTWWYNKED 105 (356)
Q Consensus 81 ~~~l~~GDv~~iP~G~~H~~~N~g~ 105 (356)
...=++||.+++++|..||.+|.|-
T Consensus 314 r~iQkPGdfVit~PgtyH~Vqs~Gf 338 (510)
T 4ask_A 314 RFVQRPGDLVWINAGTVHWVQATGW 338 (510)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSS
T ss_pred EEEECCCCEEEECCCceEEEEecCe
Confidence 4677999999999999999999885
No 373
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=43.06 E-value=39 Score=25.56 Aligned_cols=48 Identities=27% Similarity=0.333 Sum_probs=30.2
Q ss_pred CCCcccCeee-CCCEEEEEEe-CeEEEEEEcCCCceEEEEEcCCCEEEeCCCc
Q 018395 46 KNGFALPHYC-DSARVAYVLQ-GSGVAGIVLPEKEEKVVAIKKGDGIALPFGV 96 (356)
Q Consensus 46 Pg~~~~pH~h-~a~e~~yVl~-G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G~ 96 (356)
.|++..|-.. .-.....|+. |.++. ..++......++.||.++++.|+
T Consensus 22 ~gGI~LP~sakeKp~~G~VvAVG~G~~---~~~G~~~p~~VkvGD~Vlf~k~y 71 (97)
T 1pcq_O 22 AGGIVLTGSAAAKSTRGEVLAVGNGRI---LENGEVKPLDVKVGDIVIFNDGY 71 (97)
T ss_dssp TTSSCCCCCCSCCCCEEEEEEECSEEC---TTSSSCEECSCCTTCEEEECCCS
T ss_pred cceEEeCcccccCCcccEEEEEcCcee---cCCCCEEecccCCCCEEEECCcc
Confidence 3566666554 3344444444 88864 34444444679999999999943
No 374
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=42.43 E-value=36 Score=28.75 Aligned_cols=48 Identities=6% Similarity=-0.093 Sum_probs=34.1
Q ss_pred EEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEE
Q 018395 40 AKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGI 90 (356)
Q Consensus 40 ~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~ 90 (356)
....+.+|..+..---.++.+++|.+|+..+..... .....+.+||+|
T Consensus 149 ~~~~~~~g~~i~~~g~~~~~~y~I~~G~v~v~~~~~---~~~~~l~~g~~f 196 (246)
T 3of1_A 149 DTKIYQPGETIIREGDQGENFYLIEYGAVDVSKKGQ---GVINKLKDHDYF 196 (246)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEECEEEEEETTT---EEEEEEETTCEE
T ss_pred heEEeCCCCEEEeCCCcCCEEEEEEecEEEEEEcCC---ceEEEcCCCCcc
Confidence 456777877654333367899999999998865322 245788999977
No 375
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=42.25 E-value=70 Score=30.26 Aligned_cols=52 Identities=13% Similarity=-0.069 Sum_probs=38.5
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLF 279 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~ 279 (356)
+....+.+|-+.--.=. . +..+.+|++|++++.. +.+|+...-..+.+||+|
T Consensus 168 ~~~~~~~~Ge~I~~qGd-~-~d~~YiI~sG~v~v~~-~~~G~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGD-D-GDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTS-C-CCEEEEEEECEEEEEE-ECSSCEEEEEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCC-C-CceEEEEEeeEEEEEE-ecCCCEEEEEEecCCCEE
Confidence 55667777776643322 2 5689999999999888 667776666789999977
No 376
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=41.48 E-value=38 Score=28.31 Aligned_cols=49 Identities=16% Similarity=0.102 Sum_probs=35.7
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIA 91 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~ 91 (356)
+....+.||..+..---.++.+++|++|.+.+.. ++ .....+.+||++-
T Consensus 98 ~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~---~~-~~~~~l~~G~~fG 146 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLK---DN-TVLAILGKGDLIG 146 (212)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEECCEEEES---SS-CEEEEECTTCEEE
T ss_pred hheEEeCCCCEEEECCCcccEEEEEEecEEEEEE---CC-eEEEEecCCCCcC
Confidence 4567888888664333367899999999998853 23 3457899999884
No 377
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=41.30 E-value=7.1 Score=30.14 Aligned_cols=49 Identities=8% Similarity=0.081 Sum_probs=31.3
Q ss_pred EEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceE-EE--EEcCCCEE
Q 018395 41 KLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEK-VV--AIKKGDGI 90 (356)
Q Consensus 41 ~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~-~~--~l~~GDv~ 90 (356)
..++++|..+..---.++.+++|++|.+.+. ..+++++. .. .+.+||++
T Consensus 31 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 31 PCLFTEKSYLVREGDPVNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CCCBCTTEEEECTTSBCSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBS
T ss_pred EEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEe
Confidence 4556666544322226788999999999954 45555432 23 78888876
No 378
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=40.87 E-value=61 Score=30.74 Aligned_cols=54 Identities=13% Similarity=-0.022 Sum_probs=39.5
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCc--eEEEEEecCCcEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGK--RVLETTVKAGNLFI 280 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~--~~~~~~l~~Gdv~v 280 (356)
+....+.+|.+.---= -. +..+.+|++|++++...+++|+ ...-..+.+||+|=
T Consensus 65 ~~~~~~~~g~~i~~~G-d~-~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fG 120 (469)
T 1o7f_A 65 GYYENLEKGITLFRQG-DI-GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG 120 (469)
T ss_dssp CEEEEECTTCEEECTT-SB-CCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEEC
T ss_pred ceEEEECCCCEEEeCC-CC-CCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcc
Confidence 4556777776653222 23 5689999999999999999885 24567899999884
No 379
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=39.34 E-value=71 Score=26.33 Aligned_cols=49 Identities=10% Similarity=0.072 Sum_probs=33.9
Q ss_pred eeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEE
Q 018395 224 GADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLF 279 (356)
Q Consensus 224 s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~ 279 (356)
.+....+.||-+.--.=. . +..+.+|++|.+++. .++|.. ..+.+||+|
T Consensus 94 ~~~~~~~~~ge~I~~~g~-~-~~~ly~I~~G~v~v~--~~~g~~---~~l~~G~~f 142 (202)
T 3bpz_A 94 KLKFEVFQPGDYIIREGT-I-GKKMYFIQHGVVSVL--TKGNKE---MKLSDGSYF 142 (202)
T ss_dssp HCEEEEECTTCEEECTTS-B-CCEEEEEEECEEEEE--CTTSCC---EEEETTCEE
T ss_pred hCCceEECCCCEEEECCC-c-CCeEEEEeccEEEEE--ECCCeE---EEEcCCCEe
Confidence 356677788877643322 2 568999999998774 556644 358999987
No 380
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=38.47 E-value=6.9 Score=30.25 Aligned_cols=34 Identities=18% Similarity=0.350 Sum_probs=24.9
Q ss_pred CeeEEEEEeceEEEEEEccCCceEEEE--EecCCcEE
Q 018395 245 ALQVTYIVRGSGRAQIVGPDGKRVLET--TVKAGNLF 279 (356)
Q Consensus 245 A~ei~~v~~G~~~~~iv~~~g~~~~~~--~l~~Gdv~ 279 (356)
+..+.+|++|++++. .+++|+...-. .+.+||+|
T Consensus 47 ~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 47 VNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBS
T ss_pred CCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEe
Confidence 567999999999954 56677653223 78899976
No 381
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=37.99 E-value=34 Score=28.96 Aligned_cols=47 Identities=13% Similarity=0.062 Sum_probs=34.5
Q ss_pred EEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEE
Q 018395 40 AKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGI 90 (356)
Q Consensus 40 ~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~ 90 (356)
...++++|..+..--..++.+++|++|.+.+.. +++ ....+.+||++
T Consensus 31 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~---~~~-~~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQGDQGDYFYVVEKGTVDFYV---NDN-KVNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECTTCCCCEEEEEEECCEEEES---TTS-CCEEECTTCEE
T ss_pred ceEEECCCCEEEecCCCCCEEEEEEeeEEEEEE---CCE-EEEecCCCCee
Confidence 467788887664443478899999999998863 233 34788999987
No 382
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=36.38 E-value=65 Score=24.39 Aligned_cols=48 Identities=21% Similarity=0.191 Sum_probs=32.3
Q ss_pred eEEEEec-CCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEE
Q 018395 225 ADLVRLD-GKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLF 279 (356)
Q Consensus 225 ~~~v~l~-~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~ 279 (356)
+....+. +|-+.-- -.-. +..+.+|++|.+++. .++|+. ..+.+||+|
T Consensus 39 ~~~~~~~~~g~~i~~-~g~~-~~~~y~i~~G~v~~~--~~~g~~---~~l~~G~~f 87 (134)
T 2d93_A 39 MIFEVVEQAGAIILE-DGQE-LDSWYVILNGTVEIS--HPDGKV---ENLFMGNSF 87 (134)
T ss_dssp EEEEEECSSSCEEEC-TTCE-ECEEEECCBSCEEEE--CSSSCE---EEECTTCEE
T ss_pred heEEEecCCCCEEEe-CCCC-CCeEEEEEeCEEEEE--cCCCcE---EEecCCCcc
Confidence 4566777 7766532 1222 567999999999876 466654 458899976
No 383
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=31.73 E-value=84 Score=26.95 Aligned_cols=36 Identities=8% Similarity=-0.012 Sum_probs=27.0
Q ss_pred CCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEEEeCCC
Q 018395 56 DSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGIALPFG 95 (356)
Q Consensus 56 ~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~~iP~G 95 (356)
...-++||++|+..+.+ ++ .....|.+||.+.+-..
T Consensus 139 ~~~~~v~~l~G~~~v~~---~~-~~~~~L~~~d~l~~~~~ 174 (200)
T 1yll_A 139 ASTLLLFAQQDGVAISL---QG-QPRGQLAAHDCLCAEGL 174 (200)
T ss_dssp CSEEEEEESSSCEEEEE---TT-EEEEEECTTCEEEEESC
T ss_pred CCEEEEEEccCcEEEEc---CC-CceeecCCCCEEEEeCC
Confidence 44579999999988864 22 24589999999988554
No 384
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=31.27 E-value=1.5e+02 Score=22.79 Aligned_cols=49 Identities=14% Similarity=0.115 Sum_probs=31.7
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFI 280 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~v 280 (356)
+....+.+|.+.-.-= -. +..+.+|++|.+++.. .+ . .-..+.+||+|=
T Consensus 50 ~~~~~~~~g~~i~~~g-~~-~~~~y~i~~G~v~~~~---~~-~-~~~~~~~G~~fG 98 (160)
T 4f8a_A 50 FQTVHCAPGDLIYHAG-ES-VDSLCFVVSGSLEVIQ---DD-E-VVAILGKGDVFG 98 (160)
T ss_dssp CEEEEECTTCEEECTT-SB-CCEEEEEEESEEEEEE---TT-E-EEEEEETTCEEE
T ss_pred ceeeeeCCCCEEEeCC-CC-ccEEEEEEeeEEEEEE---CC-E-EEEEecCCCEeC
Confidence 4455666666553221 22 6689999999999865 22 2 345788999874
No 385
>2b0t_A NADP isocitrate dehydrogenase; monomeric, IDH, oxidoreductase; 1.75A {Corynebacterium glutamicum} PDB: 3mbc_A*
Probab=30.92 E-value=47 Score=33.31 Aligned_cols=35 Identities=23% Similarity=0.463 Sum_probs=30.2
Q ss_pred EEEEEeceEEEEEEccCCceEEEEEecCCcEEEEc
Q 018395 248 VTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVP 282 (356)
Q Consensus 248 i~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP 282 (356)
=.|.+...|.+.|++.+|+.+++..|++||+|-.-
T Consensus 421 KTFei~~~G~v~vvd~~G~vl~eh~Ve~GDIwRmc 455 (738)
T 2b0t_A 421 KTFRIEADGVVQVVSSNGDVLIEHDVEANDIWRAC 455 (738)
T ss_dssp GEEECCSSEEEEEECTTSCEEEEEEECTTCEEEEE
T ss_pred cceECCCCceEEEEeCCCCEEEeccccCCcchhhh
Confidence 35778889999999999998999999999998753
No 386
>1itw_A Isocitrate dehydrogenase; greece KEY motif, oxidoreductase; HET: ICT; 1.95A {Azotobacter vinelandii} SCOP: c.77.1.2 PDB: 1j1w_A*
Probab=30.85 E-value=47 Score=33.34 Aligned_cols=35 Identities=26% Similarity=0.509 Sum_probs=30.3
Q ss_pred EEEEEeceEEEEEEccCCceEEEEEecCCcEEEEc
Q 018395 248 VTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFIVP 282 (356)
Q Consensus 248 i~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP 282 (356)
=.|.+...|.+.|++.+|+.+++..|++||+|-.-
T Consensus 425 KTFei~~~G~v~vvd~~G~vl~eh~Ve~GDIwRmc 459 (741)
T 1itw_A 425 KTFQIPADGVVRVTDESGKLLLEQSVEAGDIWRMC 459 (741)
T ss_dssp GEEECSSSEEEEEEETTCCEEEEEEECTTCEEEEE
T ss_pred cceECCCCceEEEEeCCCCEEEEccccCCcchhhh
Confidence 35778889999999999999999999999998753
No 387
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=30.75 E-value=55 Score=30.50 Aligned_cols=49 Identities=10% Similarity=0.007 Sum_probs=34.3
Q ss_pred EEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCc--eEEEEEcCCCEE
Q 018395 42 LALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKE--EKVVAIKKGDGI 90 (356)
Q Consensus 42 ~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~--~~~~~l~~GDv~ 90 (356)
..+.+|..+.----.++.+++|++|++.+....++++ .....+.+||.|
T Consensus 274 ~~~~~ge~I~~eGd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCTTSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 4566666543333367899999999999987654443 235789999987
No 388
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=30.64 E-value=92 Score=23.57 Aligned_cols=55 Identities=20% Similarity=0.300 Sum_probs=31.5
Q ss_pred cCCCeecccccccCCeeEEEEE-eceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEE
Q 018395 231 DGKAMCSPGFSCDSALQVTYIV-RGSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSK 289 (356)
Q Consensus 231 ~~g~~~~PH~h~~~A~ei~~v~-~G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~ 289 (356)
+.||+..|-..-. -.....|+ -|.++. +.+|.....-.++.||.+++++....-+
T Consensus 23 T~gGI~LP~sake-Kp~~G~VvAVG~G~~---~~~G~~~~p~~VkvGD~Vlf~ky~Gtev 78 (99)
T 1p3h_A 23 TASGLVIPDTAKE-KPQEGTVVAVGPGRW---DEDGEKRIPLDVAEGDTVIYSKYGGTEI 78 (99)
T ss_dssp CTTSCBCCCSSCC-SEEEEEEEEECCCEE---CSSSSCEECCSCCTTCEEEEECTTCEEE
T ss_pred ccceEEeCccccc-CCceEEEEEECCCcC---cCCCCEEEccccCCCCEEEECCcCCeEE
Confidence 4577777754322 22333333 366643 3455222334699999999999655443
No 389
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=30.63 E-value=66 Score=24.43 Aligned_cols=54 Identities=19% Similarity=0.346 Sum_probs=33.1
Q ss_pred cCCCeecccccccCCeeEEEEEe-ceEEEEEEccCCceEEEEEecCCcEEEEcCCcEEEE
Q 018395 231 DGKAMCSPGFSCDSALQVTYIVR-GSGRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVSK 289 (356)
Q Consensus 231 ~~g~~~~PH~h~~~A~ei~~v~~-G~~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~~ 289 (356)
+.||+..|-.... -.....|+. |.++. +.+|++ ..-.++.||.+++++.-..-+
T Consensus 26 T~gGI~LP~sake-Kp~~G~VvAVG~G~~---~~~G~~-~p~~VkvGD~Vlf~ky~Gtev 80 (100)
T 1we3_O 26 TKGGIVLPDTAKE-KPQKGKVIAVGTGRV---LENGQR-VPLEVKEGDIVVFAKYGGTEI 80 (100)
T ss_dssp CTTCCCCCTTTSC-CCSEEEESCCCCCEE---CTTSCE-ECCSCCTTCEEEECTTCSEEE
T ss_pred ccceEEeCccccc-CCcCCEEEEECCCcC---CCCCCE-EeeecCCCCEEEECCCCCeEE
Confidence 4577777755332 233444444 77643 456654 334799999999999655444
No 390
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=30.62 E-value=42 Score=31.95 Aligned_cols=26 Identities=8% Similarity=-0.073 Sum_probs=21.0
Q ss_pred EEEEEecCCcEEEEcCCcEEEEeeCC
Q 018395 268 VLETTVKAGNLFIVPRFYVVSKIADP 293 (356)
Q Consensus 268 ~~~~~l~~Gdv~vvP~g~~h~~~~~~ 293 (356)
-++..-.+||.++||+|++|-..|-.
T Consensus 292 ~~~~~Q~~GeavfiPaG~~HQV~Nl~ 317 (392)
T 2ypd_A 292 TCTLIQFLGDAIVLPAGALHQVQNFH 317 (392)
T ss_dssp CEEEEEETTCEEEECTTCEEEEEESS
T ss_pred eEEEEEcCCCEEEecCCCHHHHhccc
Confidence 35556789999999999999986543
No 391
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=30.15 E-value=1.7e+02 Score=22.56 Aligned_cols=48 Identities=15% Similarity=0.043 Sum_probs=32.9
Q ss_pred eEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEE
Q 018395 225 ADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLF 279 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~ 279 (356)
+....+.+|-+.---= -. +..+.+|++|.+++.. +|+. -..+.+||+|
T Consensus 61 ~~~~~~~~g~~i~~~G-~~-~~~~y~i~~G~v~~~~---~~~~--~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQG-DE-GDNFYVIDQGEMDVYV---NNEW--ATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECTT-SC-CCEEEEEEESCEEEEE---TTEE--EEEECTTCEE
T ss_pred ceEEEECCCCEEEeCC-CC-CCeEEEEEecEEEEEE---CCEE--EEEecCCCEe
Confidence 4556777777663222 23 6789999999999876 4432 3578999986
No 392
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=28.18 E-value=85 Score=27.73 Aligned_cols=73 Identities=15% Similarity=0.138 Sum_probs=42.7
Q ss_pred eEEEEecCCCeecccccc------------cCCeeEEEEEece----EEEEEEccCCceEEEEEecCCcEEEEcCCcEEE
Q 018395 225 ADLVRLDGKAMCSPGFSC------------DSALQVTYIVRGS----GRAQIVGPDGKRVLETTVKAGNLFIVPRFYVVS 288 (356)
Q Consensus 225 ~~~v~l~~g~~~~PH~h~------------~~A~ei~~v~~G~----~~~~iv~~~g~~~~~~~l~~Gdv~vvP~g~~h~ 288 (356)
.-..+..+|+...||+-- . .+-++|....+ |...|.+..+. ..-..++|+++++|.+..|.
T Consensus 101 ~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~-~T~~lYLndp~~~~GGetvf~~~~~~--~~V~P~~G~~v~F~s~~lH~ 177 (243)
T 3dkq_A 101 PLFNRYQGGETFGYHIDNAIRSTPDGMIRTD-LSATLFLSEPENYQGGELVIQDTYGQ--QSIKLSAGSLVLYPSSSLHQ 177 (243)
T ss_dssp EEEEEECTTCEEEEECBCSEEEETTEEEECC-EEEEEECSCGGGEEECCEEEEETTEE--EEECCCTTCEEEEETTSEEE
T ss_pred ceEEEECCCCeeccCCCCCCCCCCCccccce-EEEEEEeCCCCCCCCceEEEeeCCCc--EEEecCCCEEEEECCCCeEc
Confidence 455677889999888731 1 33344444311 33344443321 23467899999999999998
Q ss_pred EeeCCCCeEEEE
Q 018395 289 KIADPDGLAWFS 300 (356)
Q Consensus 289 ~~~~~~~~~~~~ 300 (356)
...-..+.+|++
T Consensus 178 v~pV~~G~R~~~ 189 (243)
T 3dkq_A 178 VTPVLSGERTAA 189 (243)
T ss_dssp ECCEEEECEEEE
T ss_pred CccccccCEEEE
Confidence 743233344443
No 393
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=22.10 E-value=1.8e+02 Score=23.87 Aligned_cols=51 Identities=10% Similarity=-0.040 Sum_probs=35.2
Q ss_pred ceeEEEEecCCCeecccccccCCeeEEEEEeceEEEEEEccCCceEEEEEecCCcEEE
Q 018395 223 CGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLETTVKAGNLFI 280 (356)
Q Consensus 223 ~s~~~v~l~~g~~~~PH~h~~~A~ei~~v~~G~~~~~iv~~~g~~~~~~~l~~Gdv~v 280 (356)
..+....+.||-+.---= -. +..+.+|++|++++.. +| ..-..+.+||+|=
T Consensus 96 ~~~~~~~~~~ge~I~~~G-~~-~~~ly~I~~G~v~v~~---~~--~~~~~l~~G~~fG 146 (212)
T 3ukn_A 96 LIIKTSFCAPGEFLIRQG-DA-LQAIYFVCSGSMEVLK---DN--TVLAILGKGDLIG 146 (212)
T ss_dssp HHCEEEEECTTCEEECTT-SB-CCEEEEEEECCEEEES---SS--CEEEEECTTCEEE
T ss_pred HHhheEEeCCCCEEEECC-Cc-ccEEEEEEecEEEEEE---CC--eEEEEecCCCCcC
Confidence 345667888888764322 22 6789999999998764 33 2346799999874
No 394
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=21.47 E-value=1.6e+02 Score=23.79 Aligned_cols=25 Identities=8% Similarity=0.089 Sum_probs=19.7
Q ss_pred ccCeee-CCCEEEEEEeCeEEEEEEc
Q 018395 50 ALPHYC-DSARVAYVLQGSGVAGIVL 74 (356)
Q Consensus 50 ~~pH~h-~a~e~~yVl~G~~~~~vv~ 74 (356)
..+=.| +--.+.|+++|+=++++..
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~ 85 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGA 85 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECC
T ss_pred cccccccceEEEEecceeeEEEEEEe
Confidence 345567 7788999999998888764
No 395
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=20.87 E-value=85 Score=29.16 Aligned_cols=48 Identities=15% Similarity=0.055 Sum_probs=35.2
Q ss_pred EEEEEecCCCcccCeeeCCCEEEEEEeCeEEEEEEcCCCceEEEEEcCCCEE
Q 018395 39 AAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLPEKEEKVVAIKKGDGI 90 (356)
Q Consensus 39 ~~~~~l~Pg~~~~pH~h~a~e~~yVl~G~~~~~vv~~~~~~~~~~l~~GDv~ 90 (356)
+....+++|..+.---..++.+++|++|...+.. ++ .....+.+||+|
T Consensus 153 ~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~---~~-~~v~~l~~G~~f 200 (381)
T 4din_B 153 MFPVTHIAGETVIQQGNEGDNFYVVDQGEVDVYV---NG-EWVTNISEGGSF 200 (381)
T ss_dssp CEEEECCTTCBSSCTTSBCCEEEECSSSEEEEEE---TT-EEEEEEESSCCB
T ss_pred ceEEEECCCCEEEeCCCCCCeEEEEEeeEEEEEE---CC-eEeeeCCCCCEE
Confidence 4567888888665444478899999999998864 33 345678888876
No 396
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=20.84 E-value=59 Score=23.33 Aligned_cols=33 Identities=6% Similarity=0.215 Sum_probs=27.0
Q ss_pred cCcHHHHHhhccCCHHHHHHhhcc-cCCceEEEc
Q 018395 139 GFSTEFVSRAWDLDENTVKTLVGK-QTGKGIVKL 171 (356)
Q Consensus 139 ~~~~~vl~~af~~~~~~~~~l~~~-q~~~~iv~~ 171 (356)
..+.+-|++.|++++.++++.+.. ...+.+.|.
T Consensus 16 ~vsv~eLa~~l~VS~~TIRrdL~~Le~~G~l~R~ 49 (78)
T 1xn7_A 16 RMEAAQISQTLNTPQPMINAMLQQLESMGKAVRI 49 (78)
T ss_dssp SBCHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEE
T ss_pred CCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEe
Confidence 467788999999999999998865 344688887
Done!