Your job contains 1 sequence.
>018398
MAWWSSASASSTFNSSFLLRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIV
TNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAV
LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI
FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVL
GVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV
IGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018398
(356 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076954 - symbol:AT3G02690 species:3702 "Arabi... 1000 7.9e-101 1
UNIPROTKB|Q3Z7M8 - symbol:DET1056 "Membrane protein, puta... 168 1.6e-10 1
TIGR_CMR|DET_1056 - symbol:DET_1056 "membrane protein, pu... 168 1.6e-10 1
TIGR_CMR|SPO_3584 - symbol:SPO_3584 "membrane protein, dr... 112 3.6e-08 2
UNIPROTKB|Q3AAZ7 - symbol:CHY_1867 "Putative membrane pro... 138 7.1e-07 1
TIGR_CMR|CHY_1867 - symbol:CHY_1867 "putative membrane pr... 138 7.1e-07 1
UNIPROTKB|P0AA70 - symbol:yedA "putative membrane transpo... 134 2.1e-06 1
UNIPROTKB|Q8E8X4 - symbol:SO_4527 "10 TMS drug/metabolite... 99 4.7e-06 2
TIGR_CMR|SO_4527 - symbol:SO_4527 "integral membrane doma... 99 4.7e-06 2
TIGR_CMR|BA_0829 - symbol:BA_0829 "transporter, EamA fami... 119 0.00011 1
UNIPROTKB|P31437 - symbol:yicL "inhibitor of heme biosynt... 118 0.00015 1
UNIPROTKB|Q5LM21 - symbol:SPO3743 "Membrane protein, puta... 117 0.00017 1
TIGR_CMR|SPO_3743 - symbol:SPO_3743 "membrane protein, pu... 117 0.00017 1
TIGR_CMR|BA_3061 - symbol:BA_3061 "transporter, EamA fami... 114 0.00041 1
>TAIR|locus:2076954 [details] [associations]
symbol:AT3G02690 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;ISS] InterPro:IPR000620 Pfam:PF00892 GO:GO:0009507
EMBL:AC021640 EMBL:CP002686 GO:GO:0016020 eggNOG:COG0697
EMBL:AF428434 EMBL:AY045633 EMBL:AY133570 EMBL:AY087405
IPI:IPI00547917 RefSeq:NP_566180.1 UniGene:At.18824
UniGene:At.53162 UniGene:At.75116 IntAct:Q93V85 STRING:Q93V85
PRIDE:Q93V85 EnsemblPlants:AT3G02690.1 GeneID:821274
KEGG:ath:AT3G02690 GeneFarm:3094 TAIR:At3g02690
HOGENOM:HOG000275238 InParanoid:Q93V85 OMA:NGQHVAL PhylomeDB:Q93V85
ProtClustDB:CLSN2688009 Genevestigator:Q93V85 Uniprot:Q93V85
Length = 417
Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
Identities = 198/297 (66%), Positives = 230/297 (77%)
Query: 61 TNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAV 120
+N +T ++ SSS+VDCV G+DVEC+ + D EE + G+ G LEW V
Sbjct: 73 SNNSTEETESSSSSSSVDCVGMGSDVECVNNGED-EENRSSGILSGGE----GTFLEWTV 127
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L+SPFFFWGTAMVAMKEVLP G FFVAAFRLIPAGLLL+ FA +GR LP G NAW SI
Sbjct: 128 LISPFFFWGTAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSI 187
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
LFALVDA+CFQGFLAQGLQRTSAGLGSVIIDSQPL+VAVLA+ LFGES
Sbjct: 188 ALFALVDATCFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLL 247
Query: 241 XXXXXXXXEAPAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWH 298
E P+ D +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWH
Sbjct: 248 GVAGLLLLEVPSVTSDGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWH 307
Query: 299 MVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKG 355
MVIGGLPL+ ISV+NHDPV+ S+++L+++D++ALLYTSIFGSA+SYGVYFYSATKG
Sbjct: 308 MVIGGLPLLAISVINHDPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKG 364
>UNIPROTKB|Q3Z7M8 [details] [associations]
symbol:DET1056 "Membrane protein, putative" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0697 RefSeq:YP_181771.1
STRING:Q3Z7M8 GeneID:3229634 KEGG:det:DET1056 PATRIC:21609157
HOGENOM:HOG000184105 OMA:ITRMRLP ProtClustDB:CLSK837118
BioCyc:DETH243164:GJNF-1057-MONOMER Uniprot:Q3Z7M8
Length = 287
Score = 168 (64.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 59/237 (24%), Positives = 102/237 (43%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L+ FW +A A++ L +A R + A L L+ +A +LP + +I
Sbjct: 9 LIFTILFWSSAFAAIRVSLADYSPSHLALLRFLVASLALVIYALITRMRLPDKRDL-PAI 67
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
FL L+ S + L G + +AG S+II S P+ +LA + +
Sbjct: 68 FLLGLIGISLYHFALNYGEKTVTAGAASLIIASAPIFSVLLARFFYKDKLTPAGWLGILL 127
Query: 241 XXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVR-WVSKYSDPVMATGWHM 299
E + + +W+LLAA ++ V R + KYS +T +
Sbjct: 128 SFGGIAVI---TLGEGQTLSFEPHAFWVLLAALFTSIYIVFQRPLLKKYSGFEFST--YA 182
Query: 300 VIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK 356
+ G L+++ P + + E +S LA++Y IF +AISY +Y Y+ +K +
Sbjct: 183 IWAGTLLLMVGA----PGLLKEISEAPASSTLAVVYLGIFPTAISYLLYSYALSKAR 235
>TIGR_CMR|DET_1056 [details] [associations]
symbol:DET_1056 "membrane protein, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0697 RefSeq:YP_181771.1
STRING:Q3Z7M8 GeneID:3229634 KEGG:det:DET1056 PATRIC:21609157
HOGENOM:HOG000184105 OMA:ITRMRLP ProtClustDB:CLSK837118
BioCyc:DETH243164:GJNF-1057-MONOMER Uniprot:Q3Z7M8
Length = 287
Score = 168 (64.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 59/237 (24%), Positives = 102/237 (43%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L+ FW +A A++ L +A R + A L L+ +A +LP + +I
Sbjct: 9 LIFTILFWSSAFAAIRVSLADYSPSHLALLRFLVASLALVIYALITRMRLPDKRDL-PAI 67
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
FL L+ S + L G + +AG S+II S P+ +LA + +
Sbjct: 68 FLLGLIGISLYHFALNYGEKTVTAGAASLIIASAPIFSVLLARFFYKDKLTPAGWLGILL 127
Query: 241 XXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVR-WVSKYSDPVMATGWHM 299
E + + +W+LLAA ++ V R + KYS +T +
Sbjct: 128 SFGGIAVI---TLGEGQTLSFEPHAFWVLLAALFTSIYIVFQRPLLKKYSGFEFST--YA 182
Query: 300 VIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK 356
+ G L+++ P + + E +S LA++Y IF +AISY +Y Y+ +K +
Sbjct: 183 IWAGTLLLMVGA----PGLLKEISEAPASSTLAVVYLGIFPTAISYLLYSYALSKAR 235
>TIGR_CMR|SPO_3584 [details] [associations]
symbol:SPO_3584 "membrane protein, drug/metabolite
transporter (DMT) family" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006810
"transport" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR RefSeq:YP_168779.1
ProteinModelPortal:Q5LMH9 GeneID:3193360 KEGG:sil:SPO3584
PATRIC:23380645 HOGENOM:HOG000275237 KO:K15269 OMA:NLTFTAW
Uniprot:Q5LMH9
Length = 306
Score = 112 (44.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 30/101 (29%), Positives = 46/101 (45%)
Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVS-IFLFALV 186
WG++ + LP F VA R +PAGLLL+ RKLP W+ + + +
Sbjct: 21 WGSSYFVTTQFLPAHSPFVVALLRALPAGLLLMLLV----RKLPP--RGWIGRLLILGAL 74
Query: 187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFG 227
+ + F L R G+ + + QPL V L+A+ G
Sbjct: 75 NFAVFWSLLFVAAYRLPGGVAATVGAVQPLLVVFLSAVALG 115
Score = 79 (32.9 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 272 AQSMAVGTVMVR-WVSKYSDPVMA-TGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSD 329
A SMAVG V+ R W + P++ T W + GGL L+ ++ L G L+ ++
Sbjct: 156 ALSMAVGVVLTRKW--RPDVPLVTFTAWQLTAGGLLLIPVAWLAAPDWPG-----LSLTN 208
Query: 330 ILALLYTSIFGSAISYGVYF 349
+ AL + + G A++Y ++F
Sbjct: 209 LAALAWLGLIGGALTYILWF 228
>UNIPROTKB|Q3AAZ7 [details] [associations]
symbol:CHY_1867 "Putative membrane protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0697
RefSeq:YP_360687.1 STRING:Q3AAZ7 GeneID:3728099 KEGG:chy:CHY_1867
PATRIC:21276829 HOGENOM:HOG000245425 OMA:HIPPLAY
ProtClustDB:CLSK941309 BioCyc:CHYD246194:GJCN-1866-MONOMER
Uniprot:Q3AAZ7
Length = 303
Score = 138 (53.6 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 52/209 (24%), Positives = 89/209 (42%)
Query: 145 FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSA 204
FF F L+P L I + KL +G + ++ FL L++ FL G+ T A
Sbjct: 39 FFFGGFVLLPVALSNI---KRKNVKL-TGSD-FLFAFLIGLLNVVLSMSFLQIGINMTKA 93
Query: 205 GLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSG 264
L + I S PL V + A L+ E + S ++G
Sbjct: 94 SLAAAIFSSNPLFVVLFAYLILDEKLNFQKILGLFIGIVGVVIVFYKDLELGISHVYGI- 152
Query: 265 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE 324
++LAA + + TV+ + S+ +D V+ + ++G + L+ I +L H P++
Sbjct: 153 -LMLILAAVTYGLYTVLGKRFSQKTDSVIMNSFSFILGSVFLLPIILLKHYPLFS----- 206
Query: 325 LTSSDILALLYTSIFGSAISYGVYFYSAT 353
L IL + Y + F + ++Y YF T
Sbjct: 207 LQPKAILPMAYLTFFVTGLAYYTYFLGLT 235
>TIGR_CMR|CHY_1867 [details] [associations]
symbol:CHY_1867 "putative membrane protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0697 RefSeq:YP_360687.1
STRING:Q3AAZ7 GeneID:3728099 KEGG:chy:CHY_1867 PATRIC:21276829
HOGENOM:HOG000245425 OMA:HIPPLAY ProtClustDB:CLSK941309
BioCyc:CHYD246194:GJCN-1866-MONOMER Uniprot:Q3AAZ7
Length = 303
Score = 138 (53.6 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 52/209 (24%), Positives = 89/209 (42%)
Query: 145 FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSA 204
FF F L+P L I + KL +G + ++ FL L++ FL G+ T A
Sbjct: 39 FFFGGFVLLPVALSNI---KRKNVKL-TGSD-FLFAFLIGLLNVVLSMSFLQIGINMTKA 93
Query: 205 GLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSG 264
L + I S PL V + A L+ E + S ++G
Sbjct: 94 SLAAAIFSSNPLFVVLFAYLILDEKLNFQKILGLFIGIVGVVIVFYKDLELGISHVYGI- 152
Query: 265 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE 324
++LAA + + TV+ + S+ +D V+ + ++G + L+ I +L H P++
Sbjct: 153 -LMLILAAVTYGLYTVLGKRFSQKTDSVIMNSFSFILGSVFLLPIILLKHYPLFS----- 206
Query: 325 LTSSDILALLYTSIFGSAISYGVYFYSAT 353
L IL + Y + F + ++Y YF T
Sbjct: 207 LQPKAILPMAYLTFFVTGLAYYTYFLGLT 235
>UNIPROTKB|P0AA70 [details] [associations]
symbol:yedA "putative membrane transport protein"
species:83333 "Escherichia coli K-12" [GO:0055085 "transmembrane
transport" evidence=IMP;RCA] [GO:0022857 "transmembrane transporter
activity" evidence=IMP;RCA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA;RCA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR000620
InterPro:IPR004779 Pfam:PF00892 GO:GO:0016021 GO:GO:0005886
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG0697 GO:GO:0022857 EMBL:X13330
PIR:JS0266 RefSeq:NP_416468.1 RefSeq:YP_490212.1
ProteinModelPortal:P0AA70 EnsemblBacteria:EBESCT00000001675
EnsemblBacteria:EBESCT00000014501 GeneID:12932061 GeneID:946461
KEGG:ecj:Y75_p1928 KEGG:eco:b1959 PATRIC:32119247 EchoBASE:EB1131
EcoGene:EG11141 HOGENOM:HOG000258419 OMA:AYMALVQ
ProtClustDB:PRK11272 BioCyc:EcoCyc:EG11141-MONOMER
BioCyc:ECOL316407:JW1942-MONOMER Genevestigator:P0AA70
TIGRFAMs:TIGR00950 Uniprot:P0AA70
Length = 306
Score = 134 (52.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 60/246 (24%), Positives = 103/246 (41%)
Query: 110 MELGMLLE-WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGR 168
M LL + L + + WG+ ++ + +A R + AG+LL+ F +G
Sbjct: 1 MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGH 60
Query: 169 KLPSGFNAWVSIFLFALVDASCFQGFLAQGL-QRTSAGLGSVIIDSQPLSVAVLAALLFG 227
KLP ++ L L+ + G + Q +G+ +V++ + PL + L FG
Sbjct: 61 KLPP-LRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FG 118
Query: 228 ESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK 287
+ N WG+ +L+ + S A G+V + S+
Sbjct: 119 IKTRKLEWVGIAIGLAGIIMLNSGGNLSGNP--WGA--ILILIGSISWAFGSV---YGSR 171
Query: 288 YSDPV--MATGWHMVIGGLPLMVISVLNHDPVYGESVKELTS-SDILALLYTSIFGSAIS 344
+ PV MA M+ G+ LM+ S+ + GE + L S S LA+ Y ++FGS I+
Sbjct: 172 ITLPVGMMAGAIEMLAAGVVLMIASM-----IAGEKLTALPSLSGFLAVGYLALFGSIIA 226
Query: 345 YGVYFY 350
Y Y
Sbjct: 227 INAYMY 232
>UNIPROTKB|Q8E8X4 [details] [associations]
symbol:SO_4527 "10 TMS drug/metabolite efflux pump (DME)
family" species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:AE014299 GenomeReviews:AE014299_GR HOGENOM:HOG000275237
KO:K15269 RefSeq:NP_720046.1 DNASU:1172117 GeneID:1172117
KEGG:son:SO_4527 PATRIC:23528723 OMA:TINIAAF ProtClustDB:CLSK907692
Uniprot:Q8E8X4
Length = 284
Score = 99 (39.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L++P F WGT + L ++VA +R +PAG+LL+ +LP+ AW +
Sbjct: 7 LLAPVF-WGTTYALVSLYLQDMSPYWVAVWRALPAGVLLLMLRP----RLPT--LAWSKL 59
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALL 225
L A + F L G R + + + PL +LA L+
Sbjct: 60 SLLAFCNIGAFFTLLFIGAYRLPGAVAGTLGATLPLIFLILAWLI 104
Score = 72 (30.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 17/72 (23%), Positives = 41/72 (56%)
Query: 283 RWVSKYS--DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDIL-ALLYTSIF 339
RW+ ++ D ++ T W +++GGL L+ ++ L P ++ S D++ +L++ +
Sbjct: 154 RWMQRWDVGDFLVLTAWQLLLGGLMLIPLAWLMAGP------PQIPSMDVVPSLIWLATA 207
Query: 340 GSAISYGVYFYS 351
+A++Y + +S
Sbjct: 208 NTAVAYWAWLWS 219
>TIGR_CMR|SO_4527 [details] [associations]
symbol:SO_4527 "integral membrane domain protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:AE014299 GenomeReviews:AE014299_GR HOGENOM:HOG000275237
KO:K15269 RefSeq:NP_720046.1 DNASU:1172117 GeneID:1172117
KEGG:son:SO_4527 PATRIC:23528723 OMA:TINIAAF ProtClustDB:CLSK907692
Uniprot:Q8E8X4
Length = 284
Score = 99 (39.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L++P F WGT + L ++VA +R +PAG+LL+ +LP+ AW +
Sbjct: 7 LLAPVF-WGTTYALVSLYLQDMSPYWVAVWRALPAGVLLLMLRP----RLPT--LAWSKL 59
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALL 225
L A + F L G R + + + PL +LA L+
Sbjct: 60 SLLAFCNIGAFFTLLFIGAYRLPGAVAGTLGATLPLIFLILAWLI 104
Score = 72 (30.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 17/72 (23%), Positives = 41/72 (56%)
Query: 283 RWVSKYS--DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDIL-ALLYTSIF 339
RW+ ++ D ++ T W +++GGL L+ ++ L P ++ S D++ +L++ +
Sbjct: 154 RWMQRWDVGDFLVLTAWQLLLGGLMLIPLAWLMAGP------PQIPSMDVVPSLIWLATA 207
Query: 340 GSAISYGVYFYS 351
+A++Y + +S
Sbjct: 208 NTAVAYWAWLWS 219
>TIGR_CMR|BA_0829 [details] [associations]
symbol:BA_0829 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR OMA:IFLGEEL
RefSeq:NP_843346.1 RefSeq:YP_017467.1 RefSeq:YP_027065.1
IntAct:Q81UN5 DNASU:1088044 EnsemblBacteria:EBBACT00000010024
EnsemblBacteria:EBBACT00000015709 EnsemblBacteria:EBBACT00000022247
GeneID:1088044 GeneID:2814609 GeneID:2853121 KEGG:ban:BA_0829
KEGG:bar:GBAA_0829 KEGG:bat:BAS0789 HOGENOM:HOG000084080
ProtClustDB:CLSK915986 BioCyc:BANT260799:GJAJ-869-MONOMER
BioCyc:BANT261594:GJ7F-899-MONOMER Uniprot:Q81UN5
Length = 303
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 47/225 (20%), Positives = 92/225 (40%)
Query: 120 VLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVS 179
+L+ WG V K ++ A + + R I A + L+ + +K+ A +
Sbjct: 8 LLLLTSLLWGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWFKEKKIIPPRAAILP 67
Query: 180 IFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXX 239
+ L + + F F L++TSA +I +S+A+ + L E
Sbjct: 68 LILMGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMI 127
Query: 240 XXXXXXXXXEAPA-FDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWH 298
F S + SG+ WM+ A + +V +W +K + P+MAT +
Sbjct: 128 LSFFGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYS 187
Query: 299 MVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI 343
+ G + L+ ++ + +V + +S I +LLYT + + +
Sbjct: 188 GIFGVILLLPFNIGSF------TVTNINTSFITSLLYTGLISTVL 226
>UNIPROTKB|P31437 [details] [associations]
symbol:yicL "inhibitor of heme biosynthesis" species:83333
"Escherichia coli K-12" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000620 InterPro:IPR004779 Pfam:PF00892 GO:GO:0016021
GO:GO:0005886 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006810 EMBL:L10328 eggNOG:COG0697
TIGRFAMs:TIGR00950 PIR:E65167 RefSeq:NP_418116.1 RefSeq:YP_491775.1
ProteinModelPortal:P31437 EnsemblBacteria:EBESCT00000004055
EnsemblBacteria:EBESCT00000015184 GeneID:12930633 GeneID:948176
KEGG:ecj:Y75_p3515 KEGG:eco:b3660 PATRIC:32122809 EchoBASE:EB1639
EcoGene:EG11688 HOGENOM:HOG000083322 OMA:NRPARDE
ProtClustDB:CLSK880756 BioCyc:EcoCyc:EG11688-MONOMER
BioCyc:ECOL316407:JW3634-MONOMER Genevestigator:P31437
Uniprot:P31437
Length = 307
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 57/244 (23%), Positives = 110/244 (45%)
Query: 120 VLVSPFFFWGTAMVAMKEVLPKA--GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAW 177
VL++ WG++ V + ++ ++ + F+ RLI AGL+L+T + G K+ S N
Sbjct: 11 VLIAAVL-WGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGDKIFSIINNH 69
Query: 178 ---VSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAAL--LFGESXXX 232
+S+ +F++V A Q +++++A +V+ Q LS ++ A L +S
Sbjct: 70 KDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVL---QFLSPTIIVAWFSLVRKSRPG 126
Query: 233 XXXXXXXXXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRW-VSKYSD- 290
+ ++ S+ + +W + +A + A T +++Y
Sbjct: 127 ILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLIARYGTL 186
Query: 291 PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE--LTSSDILALLYTSIFGSAISYGVY 348
PV+ GW M+IGGL L+ P Y + S ILA Y + G+++++ +Y
Sbjct: 187 PVV--GWSMLIGGLILL--------PFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLY 236
Query: 349 FYSA 352
A
Sbjct: 237 LKGA 240
>UNIPROTKB|Q5LM21 [details] [associations]
symbol:SPO3743 "Membrane protein, putative" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR RefSeq:YP_168937.1 GeneID:3194042
KEGG:sil:SPO3743 PATRIC:23380979 HOGENOM:HOG000138901 OMA:IMGARIT
ProtClustDB:CLSK934262 Uniprot:Q5LM21
Length = 292
Score = 117 (46.2 bits), Expect = 0.00017, P = 0.00017
Identities = 27/103 (26%), Positives = 49/103 (47%)
Query: 126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFAL 185
F W +A + + ++ A F A R + +GLL + A + G+ N W + +F +
Sbjct: 14 FMWSSAFSSARIIVADASPLFSLACRFLISGLLGVIIARAMGQTWRLTRNQWKATIVFGI 73
Query: 186 VDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
+ + G +Q A + ++I + PL VA+ + LFGE
Sbjct: 74 CQNALYLGLNFYAMQTVEASVAAIIASTMPLLVALASWGLFGE 116
>TIGR_CMR|SPO_3743 [details] [associations]
symbol:SPO_3743 "membrane protein, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR RefSeq:YP_168937.1 GeneID:3194042
KEGG:sil:SPO3743 PATRIC:23380979 HOGENOM:HOG000138901 OMA:IMGARIT
ProtClustDB:CLSK934262 Uniprot:Q5LM21
Length = 292
Score = 117 (46.2 bits), Expect = 0.00017, P = 0.00017
Identities = 27/103 (26%), Positives = 49/103 (47%)
Query: 126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFAL 185
F W +A + + ++ A F A R + +GLL + A + G+ N W + +F +
Sbjct: 14 FMWSSAFSSARIIVADASPLFSLACRFLISGLLGVIIARAMGQTWRLTRNQWKATIVFGI 73
Query: 186 VDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
+ + G +Q A + ++I + PL VA+ + LFGE
Sbjct: 74 CQNALYLGLNFYAMQTVEASVAAIIASTMPLLVALASWGLFGE 116
>TIGR_CMR|BA_3061 [details] [associations]
symbol:BA_3061 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR OMA:NTLTWPV
HOGENOM:HOG000093012 ProtClustDB:CLSK916911 RefSeq:NP_845391.1
RefSeq:YP_019702.1 RefSeq:YP_029105.1 DNASU:1088199
EnsemblBacteria:EBBACT00000010502 EnsemblBacteria:EBBACT00000015515
EnsemblBacteria:EBBACT00000023157 GeneID:1088199 GeneID:2817371
GeneID:2850052 KEGG:ban:BA_3061 KEGG:bar:GBAA_3061 KEGG:bat:BAS2848
BioCyc:BANT260799:GJAJ-2910-MONOMER
BioCyc:BANT261594:GJ7F-3013-MONOMER Uniprot:Q81NW1
Length = 303
Score = 114 (45.2 bits), Expect = 0.00041, P = 0.00041
Identities = 55/246 (22%), Positives = 101/246 (41%)
Query: 116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAG--LLLITFASSQGRKLPSG 173
+EW +LVS WG K + + + R + A LLLITF + ++
Sbjct: 6 MEW-LLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSLRIER- 63
Query: 174 FNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE--SXX 231
W+ + +V + +Q ++ TSA S++I P+ +LA L E S
Sbjct: 64 -KDWLRLVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHKQERFSMK 122
Query: 232 XXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVR-WVSKYSD 290
+ W G L+AA + ++ + ++KYS
Sbjct: 123 VQIGSIVAFIGAAFVLLTGHTGGATYEYAW-LGNIIGLVAAIAWGWYPILAQPLITKYS- 180
Query: 291 PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDIL-ALLYTSIFGSAISY-GVY 348
+ T W +IG +PL++ + N + + V L+ + ++++ +IFG A+ Y G+
Sbjct: 181 AMRVTSWSTLIGIVPLVIYCLFNVNSLTWP-VDTLSWGSLAYSIIFATIFGLAMWYVGIS 239
Query: 349 FYSATK 354
+TK
Sbjct: 240 QIGSTK 245
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 356 305 0.00098 115 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 621 (66 KB)
Total size of DFA: 216 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.71u 0.13s 22.84t Elapsed: 00:00:01
Total cpu time: 22.71u 0.13s 22.84t Elapsed: 00:00:01
Start: Sat May 11 11:55:15 2013 End: Sat May 11 11:55:16 2013