Query 018400
Match_columns 356
No_of_seqs 136 out of 1642
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 08:42:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018400.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018400hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 3.1E-39 6.8E-44 304.3 31.3 311 9-327 10-333 (358)
2 PRK11272 putative DMT superfam 100.0 8.6E-34 1.9E-38 262.5 28.7 284 7-325 3-288 (292)
3 PRK11453 O-acetylserine/cystei 100.0 1.2E-32 2.6E-37 255.7 28.9 278 14-325 6-290 (299)
4 PRK11689 aromatic amino acid e 100.0 4.4E-33 9.6E-38 258.0 25.3 284 10-325 2-290 (295)
5 PRK10532 threonine and homoser 100.0 2.6E-32 5.6E-37 252.7 29.5 283 6-329 6-288 (293)
6 PRK15430 putative chlorampheni 100.0 2.3E-32 5E-37 253.4 25.2 280 5-322 1-285 (296)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 4.4E-31 9.6E-36 240.3 27.0 257 24-317 1-259 (260)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 2.6E-30 5.7E-35 240.5 26.1 279 19-326 9-297 (302)
9 TIGR03340 phn_DUF6 phosphonate 100.0 1.7E-27 3.7E-32 219.3 25.6 273 14-319 3-280 (281)
10 PF06027 DUF914: Eukaryotic pr 100.0 1.6E-26 3.5E-31 213.8 30.9 299 11-330 12-313 (334)
11 PTZ00343 triose or hexose phos 100.0 4.8E-27 1E-31 222.2 27.9 284 10-323 47-349 (350)
12 TIGR00688 rarD rarD protein. T 100.0 1.4E-26 3E-31 210.4 24.0 248 12-297 2-255 (256)
13 COG0697 RhaT Permeases of the 99.9 3.1E-24 6.7E-29 197.6 28.5 282 9-323 4-288 (292)
14 COG5006 rhtA Threonine/homoser 99.9 1.8E-22 3.8E-27 173.9 23.2 274 13-326 13-286 (292)
15 COG2962 RarD Predicted permeas 99.9 1.6E-22 3.5E-27 178.7 23.1 281 9-326 4-287 (293)
16 TIGR00776 RhaT RhaT L-rhamnose 99.9 2.7E-21 5.9E-26 178.4 24.8 273 13-322 2-288 (290)
17 KOG4510 Permease of the drug/m 99.9 1.7E-24 3.7E-29 187.4 1.0 291 11-325 37-328 (346)
18 PF08449 UAA: UAA transporter 99.8 5.1E-18 1.1E-22 157.9 27.7 280 27-327 15-302 (303)
19 KOG2765 Predicted membrane pro 99.8 1.2E-18 2.6E-23 158.2 19.8 225 82-325 165-393 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.8 8.6E-18 1.9E-22 153.9 12.4 289 14-330 19-315 (316)
21 KOG2766 Predicted membrane pro 99.7 1.3E-17 2.8E-22 144.0 8.0 252 40-321 47-298 (336)
22 COG2510 Predicted membrane pro 99.6 2.2E-15 4.8E-20 116.9 11.3 134 13-153 4-138 (140)
23 COG2510 Predicted membrane pro 99.6 1.1E-14 2.5E-19 113.0 12.7 136 184-322 4-139 (140)
24 KOG1444 Nucleotide-sugar trans 99.6 3.1E-13 6.7E-18 121.6 23.6 299 4-331 4-309 (314)
25 KOG2234 Predicted UDP-galactos 99.6 2.7E-12 5.9E-17 117.2 29.2 295 12-327 15-327 (345)
26 KOG1580 UDP-galactose transpor 99.6 9.9E-14 2.2E-18 118.7 15.9 258 42-323 54-314 (337)
27 PF00892 EamA: EamA-like trans 99.5 2.8E-14 6E-19 114.5 9.5 124 22-153 1-125 (126)
28 KOG1443 Predicted integral mem 99.5 6.1E-12 1.3E-16 111.9 22.5 252 41-320 45-313 (349)
29 PF04142 Nuc_sug_transp: Nucle 99.5 3E-12 6.4E-17 114.9 19.9 225 72-312 13-243 (244)
30 KOG1581 UDP-galactose transpor 99.5 1.8E-11 3.9E-16 109.1 21.0 264 40-326 50-317 (327)
31 PF00892 EamA: EamA-like trans 99.4 2.3E-13 5E-18 109.1 7.8 125 193-321 1-125 (126)
32 TIGR00950 2A78 Carboxylate/Ami 99.3 1E-10 2.3E-15 106.2 15.7 133 9-150 125-260 (260)
33 PF06800 Sugar_transport: Suga 99.2 3.8E-09 8.2E-14 94.8 21.4 237 51-319 21-268 (269)
34 PF13536 EmrE: Multidrug resis 99.2 6.7E-11 1.5E-15 93.6 8.3 102 46-154 2-106 (113)
35 COG5070 VRG4 Nucleotide-sugar 99.1 4.2E-10 9E-15 96.0 9.7 278 27-329 21-303 (309)
36 TIGR03340 phn_DUF6 phosphonate 99.1 1.1E-09 2.4E-14 100.8 13.4 133 185-322 3-135 (281)
37 KOG1583 UDP-N-acetylglucosamin 99.1 3.9E-09 8.5E-14 92.9 15.6 242 69-322 60-314 (330)
38 KOG1442 GDP-fucose transporter 99.1 1.9E-10 4.2E-15 100.9 7.4 281 28-333 44-338 (347)
39 PF03151 TPT: Triose-phosphate 99.1 1.4E-09 3.1E-14 90.6 12.3 138 184-322 1-153 (153)
40 PRK15430 putative chlorampheni 99.1 1.7E-09 3.6E-14 100.4 12.5 138 180-321 5-144 (296)
41 KOG4314 Predicted carbohydrate 99.1 3.1E-09 6.7E-14 89.1 12.4 212 85-323 62-277 (290)
42 PRK13499 rhamnose-proton sympo 99.0 1.4E-07 3E-12 88.0 24.2 296 10-323 5-342 (345)
43 PRK10532 threonine and homoser 99.0 7.1E-09 1.5E-13 96.1 15.7 134 11-154 147-281 (293)
44 PRK11272 putative DMT superfam 99.0 8.1E-09 1.8E-13 95.6 15.7 135 11-153 149-284 (292)
45 PF05653 Mg_trans_NIPA: Magnes 99.0 3.1E-08 6.6E-13 91.6 17.6 274 10-323 5-293 (300)
46 TIGR00688 rarD rarD protein. T 99.0 4.9E-09 1.1E-13 95.2 11.7 136 183-321 2-141 (256)
47 KOG3912 Predicted integral mem 99.0 2.6E-08 5.6E-13 88.0 15.2 279 24-321 15-333 (372)
48 PRK11689 aromatic amino acid e 99.0 1.6E-08 3.4E-13 93.9 14.7 132 11-153 155-286 (295)
49 PRK02971 4-amino-4-deoxy-L-ara 98.9 2E-08 4.3E-13 80.9 10.8 120 184-324 3-124 (129)
50 PLN00411 nodulin MtN21 family 98.9 6.4E-08 1.4E-12 91.8 16.0 136 11-154 188-328 (358)
51 PRK11453 O-acetylserine/cystei 98.8 1.6E-07 3.4E-12 87.3 16.2 136 11-153 142-286 (299)
52 KOG1582 UDP-galactose transpor 98.8 5.9E-08 1.3E-12 85.4 12.2 226 76-325 106-335 (367)
53 PF13536 EmrE: Multidrug resis 98.7 3.5E-08 7.6E-13 78.0 7.3 107 218-325 3-109 (113)
54 TIGR00803 nst UDP-galactose tr 98.7 6.5E-08 1.4E-12 85.9 8.6 209 102-320 4-222 (222)
55 PF03151 TPT: Triose-phosphate 98.6 1.3E-06 2.7E-11 72.7 14.3 133 13-151 1-150 (153)
56 TIGR00817 tpt Tpt phosphate/ph 98.6 3.4E-07 7.3E-12 85.2 11.0 138 10-153 143-292 (302)
57 TIGR00776 RhaT RhaT L-rhamnose 98.6 1.4E-06 3.1E-11 80.5 14.0 130 10-153 150-287 (290)
58 COG0697 RhaT Permeases of the 98.5 4.1E-06 8.8E-11 76.8 15.8 133 10-153 152-286 (292)
59 PTZ00343 triose or hexose phos 98.5 2.7E-06 5.8E-11 80.8 14.3 139 182-322 48-186 (350)
60 PRK15051 4-amino-4-deoxy-L-ara 98.5 6.2E-07 1.3E-11 70.4 8.2 67 255-321 42-108 (111)
61 COG4975 GlcU Putative glucose 98.5 3.1E-08 6.8E-13 86.0 0.3 278 13-322 3-285 (288)
62 PRK15051 4-amino-4-deoxy-L-ara 98.4 1.2E-06 2.5E-11 68.9 8.6 68 80-153 40-108 (111)
63 KOG2922 Uncharacterized conser 98.3 5.8E-06 1.3E-10 75.0 9.8 272 10-324 19-308 (335)
64 COG2962 RarD Predicted permeas 98.3 8.8E-06 1.9E-10 73.0 10.6 140 182-324 6-146 (293)
65 PRK02971 4-amino-4-deoxy-L-ara 98.2 2.8E-05 6E-10 62.7 12.0 117 12-153 2-121 (129)
66 COG5006 rhtA Threonine/homoser 98.2 3.8E-05 8.2E-10 67.4 12.4 135 10-153 146-281 (292)
67 PF06027 DUF914: Eukaryotic pr 98.2 4.6E-05 9.9E-10 71.3 13.5 140 8-154 164-305 (334)
68 KOG4510 Permease of the drug/m 98.1 6.7E-07 1.5E-11 78.7 0.6 136 181-324 36-171 (346)
69 PRK10452 multidrug efflux syst 98.1 2.3E-05 4.9E-10 62.1 9.1 69 256-324 36-105 (120)
70 PF06800 Sugar_transport: Suga 98.0 0.00013 2.9E-09 65.7 12.2 117 8-131 134-250 (269)
71 PF05653 Mg_trans_NIPA: Magnes 97.9 5.6E-05 1.2E-09 70.0 8.6 120 180-323 4-123 (300)
72 PF08449 UAA: UAA transporter 97.9 0.00022 4.7E-09 66.4 12.2 130 195-330 12-144 (303)
73 PRK09541 emrE multidrug efflux 97.8 0.00018 3.9E-09 56.2 9.1 67 257-323 37-104 (110)
74 PRK10650 multidrug efflux syst 97.7 0.00035 7.6E-09 54.4 9.3 63 259-321 44-107 (109)
75 PRK11431 multidrug efflux syst 97.7 0.00033 7.1E-09 54.2 8.6 66 257-322 36-102 (105)
76 PRK10650 multidrug efflux syst 97.6 0.00096 2.1E-08 51.9 10.4 60 87-152 46-106 (109)
77 COG2076 EmrE Membrane transpor 97.6 0.00034 7.5E-09 53.6 7.7 65 259-323 39-104 (106)
78 PF04657 DUF606: Protein of un 97.6 0.0016 3.5E-08 53.1 12.0 129 15-151 4-138 (138)
79 PF10639 UPF0546: Uncharacteri 97.4 0.00068 1.5E-08 52.9 7.4 110 18-152 2-112 (113)
80 PRK10452 multidrug efflux syst 97.4 0.0014 3E-08 51.9 8.9 65 83-153 36-102 (120)
81 PF04657 DUF606: Protein of un 97.4 0.0028 6E-08 51.8 10.9 132 184-319 2-138 (138)
82 PF06379 RhaT: L-rhamnose-prot 97.3 0.079 1.7E-06 49.2 20.7 299 10-322 5-340 (344)
83 PF00893 Multi_Drug_Res: Small 97.3 0.0012 2.6E-08 50.0 7.3 56 258-313 37-93 (93)
84 PRK11431 multidrug efflux syst 97.3 0.0036 7.8E-08 48.4 9.6 61 87-153 40-101 (105)
85 COG2076 EmrE Membrane transpor 97.2 0.0023 4.9E-08 49.2 8.1 61 87-153 41-102 (106)
86 PRK09541 emrE multidrug efflux 97.2 0.0035 7.6E-08 49.0 9.4 64 84-153 37-102 (110)
87 COG3238 Uncharacterized protei 97.2 0.0059 1.3E-07 50.0 10.7 138 182-322 4-146 (150)
88 PF04142 Nuc_sug_transp: Nucle 97.0 0.002 4.2E-08 58.0 6.8 77 249-326 17-93 (244)
89 PF00893 Multi_Drug_Res: Small 96.7 0.018 3.8E-07 43.6 9.2 52 87-144 40-92 (93)
90 KOG2765 Predicted membrane pro 96.5 0.015 3.4E-07 54.2 9.0 140 9-154 244-390 (416)
91 KOG1441 Glucose-6-phosphate/ph 96.4 0.0097 2.1E-07 55.2 7.3 137 10-153 161-306 (316)
92 COG4975 GlcU Putative glucose 96.4 0.0016 3.4E-08 57.2 2.0 133 184-326 3-140 (288)
93 PRK13499 rhamnose-proton sympo 96.4 0.14 3.1E-06 48.2 15.0 145 8-153 170-340 (345)
94 PF10639 UPF0546: Uncharacteri 96.2 0.014 3E-07 45.6 6.1 109 190-320 3-112 (113)
95 COG3238 Uncharacterized protei 96.1 0.11 2.4E-06 42.6 11.0 132 14-152 7-144 (150)
96 TIGR00803 nst UDP-galactose tr 96.1 0.042 9E-07 48.6 9.3 64 82-151 158-221 (222)
97 PF07857 DUF1632: CEO family ( 95.9 0.19 4.1E-06 45.3 12.4 186 13-208 1-208 (254)
98 KOG2922 Uncharacterized conser 95.8 0.0046 1E-07 56.5 1.7 129 178-330 16-144 (335)
99 KOG2234 Predicted UDP-galactos 95.7 0.37 7.9E-06 45.0 13.8 140 183-323 15-165 (345)
100 KOG1581 UDP-galactose transpor 95.6 0.18 3.9E-06 46.0 10.9 139 8-153 168-312 (327)
101 PF07857 DUF1632: CEO family ( 95.2 0.11 2.3E-06 46.8 8.4 127 184-327 1-139 (254)
102 KOG1444 Nucleotide-sugar trans 95.0 0.27 5.7E-06 45.2 10.4 138 11-154 156-300 (314)
103 COG5070 VRG4 Nucleotide-sugar 94.8 0.15 3.3E-06 44.3 7.7 136 12-153 155-295 (309)
104 KOG1580 UDP-galactose transpor 94.3 0.27 5.9E-06 43.2 8.2 134 13-153 173-312 (337)
105 KOG4314 Predicted carbohydrate 93.3 0.049 1.1E-06 46.4 1.9 64 262-325 65-128 (290)
106 PF06379 RhaT: L-rhamnose-prot 90.3 1.5 3.2E-05 41.0 8.1 143 180-325 4-156 (344)
107 KOG4831 Unnamed protein [Funct 88.5 7.9 0.00017 29.6 9.3 111 16-153 7-124 (125)
108 PRK02237 hypothetical protein; 88.4 1.7 3.6E-05 33.4 5.8 46 279-324 62-107 (109)
109 KOG1443 Predicted integral mem 86.6 8.7 0.00019 35.4 10.2 121 203-324 36-158 (349)
110 KOG4831 Unnamed protein [Funct 84.3 2.1 4.6E-05 32.6 4.5 58 264-321 66-124 (125)
111 KOG1442 GDP-fucose transporter 83.6 3.1 6.8E-05 37.6 5.9 139 10-154 183-327 (347)
112 PF02694 UPF0060: Uncharacteri 83.1 4.2 9.1E-05 31.2 5.7 46 280-325 61-106 (107)
113 KOG1582 UDP-galactose transpor 81.2 10 0.00022 34.4 8.2 136 12-154 190-332 (367)
114 KOG3912 Predicted integral mem 81.1 1.5 3.2E-05 39.7 3.0 65 259-323 95-159 (372)
115 PRK06638 NADH:ubiquinone oxido 79.0 42 0.00091 29.0 12.8 31 291-321 133-165 (198)
116 COG1742 Uncharacterized conser 78.2 7.1 0.00015 29.8 5.4 47 279-325 61-107 (109)
117 PF07168 Ureide_permease: Urei 76.0 1.3 2.8E-05 40.6 1.2 130 189-321 2-145 (336)
118 PF03547 Mem_trans: Membrane t 70.3 86 0.0019 29.8 12.4 19 249-267 62-80 (385)
119 COG4858 Uncharacterized membra 69.2 72 0.0016 27.2 9.8 115 13-131 101-219 (226)
120 PF06570 DUF1129: Protein of u 69.2 76 0.0017 27.5 12.7 58 74-131 144-204 (206)
121 PF05977 MFS_3: Transmembrane 67.8 1.4E+02 0.0031 30.1 20.2 17 281-297 351-367 (524)
122 PF04342 DUF486: Protein of un 65.9 6.6 0.00014 30.1 2.8 30 291-320 77-106 (108)
123 PF04342 DUF486: Protein of un 65.4 54 0.0012 25.2 7.6 46 100-151 59-105 (108)
124 COG0387 ChaA Ca2+/H+ antiporte 56.8 1.8E+02 0.004 27.7 13.1 117 203-321 58-182 (368)
125 COG3169 Uncharacterized protei 54.5 16 0.00035 27.5 3.1 32 291-322 84-115 (116)
126 PF11085 YqhR: Conserved membr 53.6 1.4E+02 0.003 25.2 9.7 45 240-285 62-106 (173)
127 PF07168 Ureide_permease: Urei 53.3 6.1 0.00013 36.3 0.9 114 17-131 1-127 (336)
128 PRK02237 hypothetical protein; 51.8 94 0.002 24.0 6.9 38 111-154 68-105 (109)
129 PF03595 SLAC1: Voltage-depend 51.4 2E+02 0.0044 26.6 11.1 78 138-232 6-91 (330)
130 PF02694 UPF0060: Uncharacteri 47.3 71 0.0015 24.6 5.7 38 111-154 66-103 (107)
131 PF11044 TMEMspv1-c74-12: Plec 46.4 7.4 0.00016 24.6 0.2 16 302-317 2-17 (49)
132 COG1742 Uncharacterized conser 46.3 1.2E+02 0.0025 23.4 6.6 38 111-154 67-104 (109)
133 PRK11010 ampG muropeptide tran 45.4 3.2E+02 0.0068 27.1 13.7 18 306-323 385-402 (491)
134 COG4657 RnfA Predicted NADH:ub 44.9 78 0.0017 26.4 5.9 52 180-231 129-185 (193)
135 KOG1583 UDP-N-acetylglucosamin 44.1 36 0.00078 31.1 4.2 69 262-330 76-145 (330)
136 TIGR02865 spore_II_E stage II 42.7 4.4E+02 0.0096 28.0 15.0 44 103-152 11-54 (764)
137 KOG2766 Predicted membrane pro 39.9 42 0.0009 30.4 3.9 135 9-153 163-298 (336)
138 PRK11902 ampG muropeptide tran 39.9 3.3E+02 0.0072 25.7 13.1 29 182-210 246-274 (402)
139 PRK10489 enterobactin exporter 37.0 3.7E+02 0.0081 25.5 11.9 17 306-322 382-398 (417)
140 COG0004 AmtB Ammonia permease 35.3 4.3E+02 0.0093 25.7 10.7 237 11-280 133-384 (409)
141 PF15102 TMEM154: TMEM154 prot 34.5 44 0.00095 27.3 3.0 18 310-327 69-86 (146)
142 TIGR00910 2A0307_GadC glutamat 34.2 4.6E+02 0.01 26.2 11.0 14 212-225 331-344 (507)
143 PF06946 Phage_holin_5: Phage 33.4 1.3E+02 0.0027 22.6 5.0 61 268-328 22-86 (93)
144 PRK10263 DNA translocase FtsK; 32.1 6.1E+02 0.013 28.8 11.8 18 110-127 84-101 (1355)
145 PF15099 PIRT: Phosphoinositid 32.0 20 0.00043 28.4 0.6 18 249-266 56-73 (129)
146 COG3086 RseC Positive regulato 31.7 26 0.00057 28.5 1.3 26 272-297 70-95 (150)
147 PF07698 7TM-7TMR_HD: 7TM rece 31.6 3.2E+02 0.0069 23.1 18.7 34 201-235 120-153 (194)
148 COG4854 Predicted membrane pro 31.0 1E+02 0.0022 24.0 4.2 52 137-209 73-124 (126)
149 PF15048 OSTbeta: Organic solu 30.8 37 0.00081 26.8 2.0 13 309-321 43-55 (125)
150 PF06570 DUF1129: Protein of u 29.7 1.6E+02 0.0034 25.5 6.0 22 13-34 112-133 (206)
151 PF08507 COPI_assoc: COPI asso 29.1 68 0.0015 25.8 3.4 15 306-320 89-103 (136)
152 PF07444 Ycf66_N: Ycf66 protei 29.0 28 0.0006 25.6 0.9 30 301-330 4-33 (84)
153 PF06679 DUF1180: Protein of u 28.6 57 0.0012 27.3 2.8 12 342-353 138-149 (163)
154 PF05297 Herpes_LMP1: Herpesvi 28.2 19 0.00042 32.7 0.0 30 100-129 47-77 (381)
155 TIGR02005 PTS-IIBC-alpha PTS s 27.6 3.8E+02 0.0082 27.1 8.9 124 118-279 291-414 (524)
156 TIGR01167 LPXTG_anchor LPXTG-m 27.3 63 0.0014 18.7 2.2 18 303-320 11-28 (34)
157 PRK11469 hypothetical protein; 27.1 30 0.00065 29.7 1.0 42 280-321 44-86 (188)
158 PRK13108 prolipoprotein diacyl 26.3 1.7E+02 0.0036 29.1 6.0 22 302-323 254-275 (460)
159 COG3086 RseC Positive regulato 26.2 1.1E+02 0.0024 25.0 3.9 31 100-131 72-102 (150)
160 PF08693 SKG6: Transmembrane a 26.0 60 0.0013 20.3 1.9 17 309-325 22-38 (40)
161 PF09586 YfhO: Bacterial membr 25.8 8.3E+02 0.018 26.0 12.4 31 24-55 317-347 (843)
162 PRK10110 bifunctional PTS syst 24.7 3.2E+02 0.0069 27.7 7.8 34 248-281 396-429 (530)
163 TIGR00544 lgt prolipoprotein d 23.9 41 0.00088 30.8 1.3 24 302-325 246-269 (278)
164 TIGR00881 2A0104 phosphoglycer 22.7 5.8E+02 0.013 23.1 12.0 18 193-210 41-58 (379)
165 PF15345 TMEM51: Transmembrane 22.5 49 0.0011 29.2 1.4 22 308-329 67-88 (233)
166 COG2246 Predicted membrane pro 22.4 3.4E+02 0.0073 21.9 6.2 59 71-133 8-69 (139)
167 PF05393 Hum_adeno_E3A: Human 22.4 1.8E+02 0.0039 21.5 4.0 29 43-71 37-65 (94)
168 PF04246 RseC_MucC: Positive r 21.6 37 0.00079 27.3 0.5 21 277-297 68-88 (135)
169 TIGR01998 PTS-II-BC-nag PTS sy 20.9 6E+02 0.013 25.3 8.8 31 248-278 349-379 (476)
170 PF05884 ZYG-11_interact: Inte 20.7 6.8E+02 0.015 23.2 16.1 116 15-144 107-225 (299)
171 PRK10599 calcium/sodium:proton 20.7 7.6E+02 0.016 23.7 11.9 15 138-152 13-27 (366)
172 KOG3817 Uncharacterized conser 20.4 4.4E+02 0.0095 25.2 7.1 29 23-52 200-228 (452)
173 COG1968 BacA Undecaprenyl pyro 20.2 6.7E+02 0.015 22.9 16.0 89 13-104 86-174 (270)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=3.1e-39 Score=304.28 Aligned_cols=311 Identities=37% Similarity=0.642 Sum_probs=250.6
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhcc-CCCCCCcHHHHHHHHHHHHHHH
Q 018400 9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHR-SERPQLTFSILCSFFLLSVFGC 87 (356)
Q Consensus 9 ~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~ 87 (356)
+..+++..+++..+..+...++.|.+++++++|..+.++|+.++++++.++.++++| +.+++.+++++..+.+.|+++.
T Consensus 10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~ 89 (358)
T PLN00411 10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGS 89 (358)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence 367899999999999999999999999989999999999999999999988776554 3335556788899999999987
Q ss_pred HHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHH------hhccccccccccccchhhHHHHhhhhhhheeccCCCCc
Q 018400 88 SSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIF------RLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLI 161 (356)
Q Consensus 88 ~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~------l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~ 161 (356)
.++.+++.|++|+++++++++.++.|+++.++++++ +|||++++ +++|++++++|+.++...+++...
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~~~~ 163 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGPRVF 163 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCcccc
Confidence 777899999999999999999999999999999999 69999999 999999999999988643333211
Q ss_pred cCCCCCC---C-CCcc-CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 018400 162 GELSHSG---S-PRRL-LLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVS 236 (356)
Q Consensus 162 ~~~~~~~---~-~~~~-~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 236 (356)
.. ++++ + .+.. +..+..+...|++++++++++||+|++++|+..+++++....++++..++.+...+.....++
T Consensus 164 ~~-~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~ 242 (358)
T PLN00411 164 VA-SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEK 242 (358)
T ss_pred cc-cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHcc
Confidence 00 0000 0 0000 111223446799999999999999999999999998745577778888777777766665543
Q ss_pred C-CCcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHH
Q 018400 237 E-PSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVA 315 (356)
Q Consensus 237 ~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~ 315 (356)
. ...|....+.....++|.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|++
T Consensus 243 ~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~ 321 (358)
T PLN00411 243 NNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITL 321 (358)
T ss_pred CCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 2 233322223334557777764 67899999999999999999999999999999999999999999999999999999
Q ss_pred hhhhheeccccc
Q 018400 316 GFYAVMWGKSKE 327 (356)
Q Consensus 316 g~~l~~~~~~~~ 327 (356)
|+++..+.|+||
T Consensus 322 Gv~l~~~~~~~~ 333 (358)
T PLN00411 322 GFYAVMWGKANE 333 (358)
T ss_pred HHHHHHhhhhhh
Confidence 999998765544
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=8.6e-34 Score=262.53 Aligned_cols=284 Identities=12% Similarity=0.075 Sum_probs=235.2
Q ss_pred hHHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH
Q 018400 7 SMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG 86 (356)
Q Consensus 7 ~~~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 86 (356)
.++-..-.+.+++..++||.+++..|...+ +++|..++++|+..++++++++...++++ + .+++++......|.++
T Consensus 3 ~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-~--~~~~~~~~~~~~g~~~ 78 (292)
T PRK11272 3 FRQLLPLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRGHP-L--PTLRQWLNAALIGLLL 78 (292)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhCCC-C--CcHHHHHHHHHHHHHH
Confidence 334444567788888999999999999998 89999999999999999988876544332 2 2457788888888887
Q ss_pred -HHHHHHHHHHh-hccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCC
Q 018400 87 -CSSQIFSFVGI-QYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEL 164 (356)
Q Consensus 87 -~~~~~~~~~al-~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~ 164 (356)
..++.+++.+. ++++++.++++.++.|+++.+++++ +|||++++ ++.|++++++|+.++.. . .
T Consensus 79 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~-~-~------ 143 (292)
T PRK11272 79 LAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNS-G-G------ 143 (292)
T ss_pred HHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhc-C-c------
Confidence 77888999999 9999999999999999999999985 69999999 99999999999988742 1 1
Q ss_pred CCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 018400 165 SHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLG 244 (356)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 244 (356)
..+....|++++++++++||.|.+..||..++ ++...+++++..+.+...+.....+.+.. ...
T Consensus 144 ------------~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 207 (292)
T PRK11272 144 ------------NLSGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLT--ALP 207 (292)
T ss_pred ------------ccccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCccc--ccC
Confidence 11233579999999999999999999997543 25566778888888887777654332211 112
Q ss_pred chhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecc
Q 018400 245 LDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGK 324 (356)
Q Consensus 245 ~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~ 324 (356)
+...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|+.|+++..+.+
T Consensus 208 ~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 208 TLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 33468889999999999999999999999999999999999999999999999999999999999999999999986544
Q ss_pred c
Q 018400 325 S 325 (356)
Q Consensus 325 ~ 325 (356)
+
T Consensus 288 ~ 288 (292)
T PRK11272 288 Y 288 (292)
T ss_pred h
Confidence 3
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=255.73 Aligned_cols=278 Identities=18% Similarity=0.197 Sum_probs=217.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HHHHHH
Q 018400 14 SVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSSQIF 92 (356)
Q Consensus 14 ~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~ 92 (356)
.+..++++++||.++++.|...+ +++|..+.++|+.++++.+.++. +++ +.++ ......|++. .....+
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~~~l~~~~--~~~----~~~~---~~~~~~g~~~~~~~~~~ 75 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLH-NMPPLMLAGLRFMLVAFPAIFFV--ARP----KVPL---NLLLGYGLTISFGQFAF 75 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHh--cCC----CCch---HHHHHHHHHHHHHHHHH
Confidence 45678899999999999999998 89999999999999876655532 221 1122 2344446655 556667
Q ss_pred HHHHhhc-cChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCC
Q 018400 93 SFVGIQY-SSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPR 171 (356)
Q Consensus 93 ~~~al~~-~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~ 171 (356)
++.+++| .++++++++.++.|+++.+++++++|||++++ ++++++++++|+.++.. +..
T Consensus 76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~--~~~------------ 135 (299)
T PRK11453 76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIE--DSL------------ 135 (299)
T ss_pred HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhcc--ccC------------
Confidence 8899998 57899999999999999999999999999999 99999999999998862 111
Q ss_pred ccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhch--hHHHHHHHHHHHHHHHHHHHHHHhcCCC---cccccch
Q 018400 172 RLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAA--VLIIMFYLFFFNTILSTAFALIVVSEPS---DWKLGLD 246 (356)
Q Consensus 172 ~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~ 246 (356)
++.+....|++++++++++||.|.+++||..++.++ ......+....+.+.........+++.. .+...+.
T Consensus 136 ----~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (299)
T PRK11453 136 ----NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDM 211 (299)
T ss_pred ----CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCH
Confidence 112223579999999999999999999998765431 2344455555555544444443333211 1112233
Q ss_pred hhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400 247 IGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS 325 (356)
Q Consensus 247 ~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~ 325 (356)
..|..+++.++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|+++|++|+++..+.++
T Consensus 212 ~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 212 TTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 4688999999999999999999999999999999999999999999999999999999999999999999998876554
No 4
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=4.4e-33 Score=258.05 Aligned_cols=284 Identities=14% Similarity=0.129 Sum_probs=214.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HH
Q 018400 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CS 88 (356)
Q Consensus 10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~ 88 (356)
+.+++++++++.++||.+++..|...+ +++|..+.++|+.++.+++.++. ++++.++ +++ +..+.+.++ ..
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~-~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~~---~~~-~~~~~~~l~~~~ 73 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSE-SLGPVGGAAMIYSVSGLLLLLTV---GFPRLRQ---FPK-RYLLAGGLLFVS 73 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHHHHHHc---ccccccc---ccH-HHHHHHhHHHHH
Confidence 346788899999999999999999998 89999999999999998887642 2211111 222 233444445 77
Q ss_pred HHHHHHHHhhc----cChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCC
Q 018400 89 SQIFSFVGIQY----SSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEL 164 (356)
Q Consensus 89 ~~~~~~~al~~----~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~ 164 (356)
++.+++.++++ .++++++++.+++|+++.+++++++|||++++ +++|++++++|++++.. .+.... .
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~-~~~~~~-~- 144 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLG-GDNGLS-L- 144 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheec-CCccch-h-
Confidence 88888888765 57788899999999999999999999999999 99999999999999863 111000 0
Q ss_pred CCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 018400 165 SHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLG 244 (356)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 244 (356)
.+ ..++......|++++++++++||.|+++.||..++.+ +.+... ..+.+.+.+.....+ +. ... .
T Consensus 145 ------~~-~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~~---~~~~~~l~~~~~~~~-~~-~~~-~ 210 (295)
T PRK11689 145 ------AE-LINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLFF---ILTALALWIKYFLSP-QP-AMV-F 210 (295)
T ss_pred ------hh-hhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHHH---HHHHHHHHHHHHHhc-Cc-ccc-C
Confidence 00 0001122356999999999999999999999977764 665432 223333333333222 11 111 1
Q ss_pred chhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecc
Q 018400 245 LDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGK 324 (356)
Q Consensus 245 ~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~ 324 (356)
+...|..+++.++ +++++|.+|++++++.++++++.+.+++|+++++++++++||+++..+++|+++|+.|+++....+
T Consensus 211 ~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 211 SLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred CHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 2235777777785 899999999999999999999999999999999999999999999999999999999998876544
Q ss_pred c
Q 018400 325 S 325 (356)
Q Consensus 325 ~ 325 (356)
+
T Consensus 290 ~ 290 (295)
T PRK11689 290 R 290 (295)
T ss_pred h
Confidence 3
No 5
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=2.6e-32 Score=252.72 Aligned_cols=283 Identities=11% Similarity=0.071 Sum_probs=227.0
Q ss_pred hhHHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHH
Q 018400 6 GSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVF 85 (356)
Q Consensus 6 ~~~~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 85 (356)
+..++.+++..++++.++|+.++.+.|++.+ +++|..+.++|+.+++++++++... ++ ++.++++++..+..|++
T Consensus 6 ~~~~~~~~~~~~~la~~~~~~~~~~~K~~~~-~~~~~~~~~~R~~~a~l~l~~~~~~-~~---~~~~~~~~~~~~~~g~~ 80 (293)
T PRK10532 6 RKLPVWLPILLLLIAMASIQSGASLAKSLFP-LVGAPGVTALRLALGTLILIAIFKP-WR---LRFAKEQRLPLLFYGVS 80 (293)
T ss_pred cccccchHHHHHHHHHHHHHhhHHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHHhH-Hh---ccCCHHHHHHHHHHHHH
Confidence 4445678999999999999999999999998 7999999999999999888765321 11 23356788888888887
Q ss_pred HHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCC
Q 018400 86 GCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELS 165 (356)
Q Consensus 86 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~ 165 (356)
.+..+.+++++++|++++.++++.++.|+++.+++ +||+. +..++.++++|+.++.. .+.
T Consensus 81 ~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--------~~~~~~i~~~Gv~li~~-~~~------- 140 (293)
T PRK10532 81 LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--------DFVWVVLAVLGLWFLLP-LGQ------- 140 (293)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--------HHHHHHHHHHHHheeee-cCC-------
Confidence 78888999999999999999999999999998876 35554 34567788999988752 111
Q ss_pred CCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 018400 166 HSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGL 245 (356)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 245 (356)
+.......|+++.++++++||.|.+..||..++.+ +.... +...++++++.+.....+. ...+ +
T Consensus 141 ----------~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~---~ 204 (293)
T PRK10532 141 ----------DVSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAG-EALW---H 204 (293)
T ss_pred ----------CcccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccC-cccC---C
Confidence 11122357999999999999999999999987775 76664 5566666666666653321 1111 2
Q ss_pred hhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400 246 DIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS 325 (356)
Q Consensus 246 ~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~ 325 (356)
...|..+++.|++++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|++|.+...+.++
T Consensus 205 ~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~ 284 (293)
T PRK10532 205 WSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIR 284 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence 23466678999999999999999999999999999999999999999999999999999999999999999999876655
Q ss_pred cccc
Q 018400 326 KEEK 329 (356)
Q Consensus 326 ~~~~ 329 (356)
|+.|
T Consensus 285 ~~~~ 288 (293)
T PRK10532 285 REPK 288 (293)
T ss_pred CCCC
Confidence 4333
No 6
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=100.00 E-value=2.3e-32 Score=253.41 Aligned_cols=280 Identities=13% Similarity=0.048 Sum_probs=210.4
Q ss_pred hhhHHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCC--C-CCcHHHHHHHHH
Q 018400 5 MGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER--P-QLTFSILCSFFL 81 (356)
Q Consensus 5 ~~~~~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~--~-~~~~~~~~~~~~ 81 (356)
|+|+++.+|++++++++++||.+++..|.. + +++|..+.++|...+.+++.++...++++.. + ..+++++....
T Consensus 1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~- 77 (296)
T PRK15430 1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLA- 77 (296)
T ss_pred CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHH-
Confidence 456677889999999999999999999986 4 7999999999999999887776554432111 0 11334433333
Q ss_pred HHHHH-HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCC
Q 018400 82 LSVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPL 160 (356)
Q Consensus 82 ~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~ 160 (356)
.+.++ +.++.++++|++++++++++++.++.|+++.+++++++|||++++ +++|++++++|++++.. +.
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~---~~- 147 (296)
T PRK15430 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLW---TF- 147 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHH---Hc-
Confidence 55555 889999999999999999999999999999999999999999999 99999999999999852 10
Q ss_pred ccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 018400 161 IGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEPS 239 (356)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 239 (356)
+ + . .++.++++++||.|.+..|+..++.. +....+.+...++.....+.. ..+..
T Consensus 148 ---------------~-~-~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 203 (296)
T PRK15430 148 ---------------G-S-L----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTS 203 (296)
T ss_pred ---------------C-C-c----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcc
Confidence 0 1 1 14688899999999999998743321 123334444444443322111 11111
Q ss_pred cccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhh
Q 018400 240 DWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYA 319 (356)
Q Consensus 240 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l 319 (356)
.+...+...+..+.+.|+ .+.++|.+|++++++.++++++.+.+++|+++++++++++||++++.+++|+++|++|+.+
T Consensus 204 ~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v 282 (296)
T PRK15430 204 HMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAI 282 (296)
T ss_pred cccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 111111112333444555 7889999999999999999999999999999999999999999999999999999888777
Q ss_pred hee
Q 018400 320 VMW 322 (356)
Q Consensus 320 ~~~ 322 (356)
...
T Consensus 283 ~~~ 285 (296)
T PRK15430 283 FVM 285 (296)
T ss_pred HHH
Confidence 653
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=100.00 E-value=4.4e-31 Score=240.31 Aligned_cols=257 Identities=18% Similarity=0.214 Sum_probs=217.5
Q ss_pred HHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HHHHHHHHHHhhccCh
Q 018400 24 QVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSSQIFSFVGIQYSSP 102 (356)
Q Consensus 24 ~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~ 102 (356)
||.+++..|..++++.|+....+.|...+.+++.++...+ .+++++.+....|.++ +.++.+++.|++|+++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 8999999999987678899999999988888777653221 2346677788888888 9999999999999999
Q ss_pred hhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchH
Q 018400 103 TLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWI 182 (356)
Q Consensus 103 ~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (356)
++++++.++.|+++.+++++++|||++++ ++.|+.++++|+.++.. .+ +.+...
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~-~~-------------------~~~~~~ 127 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS-DG-------------------NLSINP 127 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc-CC-------------------cccccH
Confidence 99999999999999999999999999999 99999999999999852 11 122446
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhH
Q 018400 183 LGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTG 261 (356)
Q Consensus 183 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 261 (356)
.|++++++++++|+.+.+..|+..++.+ ++.....+.+..+.++..+.....+++. .+ +...|..+++.+++++.
T Consensus 128 ~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~ 203 (260)
T TIGR00950 128 AGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGTA 203 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHHH
Confidence 7999999999999999999999987764 2334555678888888887776543221 11 33467788899999999
Q ss_pred HHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhh
Q 018400 262 FRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGF 317 (356)
Q Consensus 262 ~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~ 317 (356)
++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++++.|+
T Consensus 204 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 204 LAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999886
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.98 E-value=2.6e-30 Score=240.45 Aligned_cols=279 Identities=16% Similarity=0.140 Sum_probs=217.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018400 19 IVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQ 98 (356)
Q Consensus 19 l~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~ 98 (356)
+...+-....+..|+++++...|..+.+.|+..+.+...+. +..+.+++++.+++++++.+..|++.+.++.+.+.|++
T Consensus 9 ~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~ 87 (302)
T TIGR00817 9 LWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLS-WSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLS 87 (302)
T ss_pred HHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHH-HHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444556889999833668888889988887766554 21222334557889999999999999888999999999
Q ss_pred ccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCC
Q 018400 99 YSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQ 178 (356)
Q Consensus 99 ~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (356)
|++++.++++.+++|+++.+++++++|||++++ ++.|++++++|+++.. .+ +.
T Consensus 88 ~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~--~~-------------------~~ 140 (302)
T TIGR00817 88 KVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS--DT-------------------EL 140 (302)
T ss_pred hccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc--CC-------------------cc
Confidence 999999999999999999999999999999999 9999999999998753 11 12
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHH--hhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCc---ccc-----cchhh
Q 018400 179 LSWILGGFFLAAEAFMNSAWFILQALILR--KFAAVLIIMFYLFFFNTILSTAFALIVVSEPSD---WKL-----GLDIG 248 (356)
Q Consensus 179 ~~~~~G~~~~l~s~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~-----~~~~~ 248 (356)
+....|++++++++++||+|.++.||..+ +.+ +.+.+.++...+.+.+.|.....++.... +.. .....
T Consensus 141 ~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (302)
T TIGR00817 141 SFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKI 219 (302)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHH
Confidence 23357999999999999999999999887 674 99999999999999999988755432110 100 00001
Q ss_pred HHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecccc
Q 018400 249 LVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSK 326 (356)
Q Consensus 249 ~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~ 326 (356)
+...+..+..+....+.++++++++.++++++++.+++|+++++++++++||+++..+++|.+++++|++++.+.|++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~ 297 (302)
T TIGR00817 220 YTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQ 297 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence 111222232223333345568999999999999999999999999999999999999999999999999999765443
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.96 E-value=1.7e-27 Score=219.25 Aligned_cols=273 Identities=13% Similarity=0.067 Sum_probs=201.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhc-cCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 018400 14 SVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFH-RSERPQLTFSILCSFFLLSVFGCSSQIF 92 (356)
Q Consensus 14 ~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 92 (356)
.+..++++++|+...+..|...+ +-++ +.+++.....+++.++...+. ++.++..+++.+......++.+..++.+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~-~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHAD-KEPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLG 79 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCC-chhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 45678899999999999997765 3334 346777777777777655432 2223332334444444444445999999
Q ss_pred HHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCc
Q 018400 93 SFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRR 172 (356)
Q Consensus 93 ~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~ 172 (356)
++.|+++.+++.++.+.++.|+++.+++++++|||++++ +++|+.+++.|+.++.. . +.
T Consensus 80 ~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~-~-~~------------- 138 (281)
T TIGR03340 80 LAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGL-S-RF------------- 138 (281)
T ss_pred HHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhc-c-cc-------------
Confidence 999999999999999999999999999999999999999 99999999999998852 1 11
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHH----HHHHHHHHHHHHHHHHHHHHhcCCCcccccchhh
Q 018400 173 LLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLI----IMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIG 248 (356)
Q Consensus 173 ~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 248 (356)
......|+.++++++++|+.|.+..|+..++.+ +.. .+.+.....++...+.....+. ..+. ..+..
T Consensus 139 -----~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~ 209 (281)
T TIGR03340 139 -----AQHRRKAYAWALAAALGTAIYSLSDKAAALGVP-AFYSALGYLGIGFLAMGWPFLLLYLKRHG--RSMF-PYARQ 209 (281)
T ss_pred -----cccchhHHHHHHHHHHHHHHhhhhccccccchh-cccccHHHHHHHHHHHHHHHHHHHHHHhc--cchh-hhHHH
Confidence 112245788999999999999999987654443 322 2222222221221222111111 1111 12224
Q ss_pred HHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhh
Q 018400 249 LVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYA 319 (356)
Q Consensus 249 ~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l 319 (356)
+..+++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+++
T Consensus 210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 55667788889999999999999999999999999999999999999999999999999999999999875
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=1.6e-26 Score=213.83 Aligned_cols=299 Identities=16% Similarity=0.170 Sum_probs=231.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hhHHHHHHHHHHHHHHHHHHHHhccC-CCCCCcHHHHHHHHHHHHHHHH
Q 018400 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGIN-KYVIIVYSDALSSLFFLFCSFLFHRS-ERPQLTFSILCSFFLLSVFGCS 88 (356)
Q Consensus 11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~-~~~~~~~r~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~ 88 (356)
.+..+..=+.+++-..+...+....+.+.+ |....++-+..-.++..+...+++++ ++.+.-+++|+++++++++-..
T Consensus 12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~ 91 (334)
T PF06027_consen 12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVE 91 (334)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHH
Confidence 344444445556666777777776654444 66667777766666666655444432 2233345778888889999999
Q ss_pred HHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCC
Q 018400 89 SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSG 168 (356)
Q Consensus 89 ~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~ 168 (356)
.+.+.+.|++|++.+.++++..++-+++++++++++|||.++. +++|+++++.|+.++...+...
T Consensus 92 aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~--------- 156 (334)
T PF06027_consen 92 ANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLS--------- 156 (334)
T ss_pred HHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeecccc---------
Confidence 9999999999999999999999999999999999999999999 9999999999999987422111
Q ss_pred CCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCC-Ccccccchh
Q 018400 169 SPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEP-SDWKLGLDI 247 (356)
Q Consensus 169 ~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~ 247 (356)
..++++.++..+||+++++|+++||+++++.++..++.+ ..++..+..+++.++..+...+.+... ...+..+.
T Consensus 157 ---~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~- 231 (334)
T PF06027_consen 157 ---GSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQ- 231 (334)
T ss_pred ---cccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChh-
Confidence 001134456789999999999999999999999999986 889999999999999888877665532 11221111
Q ss_pred hHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccccc
Q 018400 248 GLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKE 327 (356)
Q Consensus 248 ~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~ 327 (356)
.+..++..+ ++...-|.+....++..+|+..+.-..+..+++++++++++|+++++..++|.++|+.|+.++...++++
T Consensus 232 ~~~~~v~~~-~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~ 310 (334)
T PF06027_consen 232 VIGLLVGYA-LCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE 310 (334)
T ss_pred hHHHHHHHH-HHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence 233333333 3667778888899999999999999999999999999999999999999999999999999998766554
Q ss_pred ccc
Q 018400 328 EKT 330 (356)
Q Consensus 328 ~~~ 330 (356)
+++
T Consensus 311 ~~~ 313 (334)
T PF06027_consen 311 EEA 313 (334)
T ss_pred ccc
Confidence 443
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.96 E-value=4.8e-27 Score=222.18 Aligned_cols=284 Identities=14% Similarity=0.135 Sum_probs=224.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCc--HHHHHHHHHHHHHH
Q 018400 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGIN-KYVIIVYSDALSSLFFLFCSFLFHRSERPQLT--FSILCSFFLLSVFG 86 (356)
Q Consensus 10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~-~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~ 86 (356)
+.+..++.+....+-.......|.+++ ++| |..+..+|++.+.++....+ ..+.+++|+++ +++++..+..|+++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~-~~~~P~~l~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALN-MLPLPWTISSLQLFVGWLFALLYW-ATGFRKIPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 344455555566666777788899998 799 99999999999987655443 22222234442 45788899999999
Q ss_pred HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCC
Q 018400 87 CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSH 166 (356)
Q Consensus 87 ~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~ 166 (356)
...+...+.|+++++++.++++..+.|+++++++++++|||++++ ++++++++++|+++... +
T Consensus 125 ~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~--~--------- 187 (350)
T PTZ00343 125 LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV--K--------- 187 (350)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec--c---------
Confidence 555777889999999999999999999999999999999999999 99999999999999862 1
Q ss_pred CCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------hhHHHHHHHHHHHHHHHHHHHHHHhcCC--
Q 018400 167 SGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA------AVLIIMFYLFFFNTILSTAFALIVVSEP-- 238 (356)
Q Consensus 167 ~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~-- 238 (356)
+.+....|++++++|++++|.|+++.||..++.+ ++.....+....+.++++|+....+...
T Consensus 188 ----------~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~ 257 (350)
T PTZ00343 188 ----------ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWV 257 (350)
T ss_pred ----------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 1223467999999999999999999999876531 2666777778899999999887554321
Q ss_pred Cccc----ccchhhHHHHHHHHHHhhHHHHhHHHh----hhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhH
Q 018400 239 SDWK----LGLDIGLVAVLYSAVIGTGFRVGLCTW----CLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGA 310 (356)
Q Consensus 239 ~~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~----al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~ 310 (356)
..+. ......+..+++ .++.+++++++|+. +++++++.+.+....++|+++++++++++||+++..+++|+
T Consensus 258 ~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~ 336 (350)
T PTZ00343 258 PVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGM 336 (350)
T ss_pred HHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHH
Confidence 1110 001112233444 35578999999995 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhheec
Q 018400 311 MIIVAGFYAVMWG 323 (356)
Q Consensus 311 ~li~~g~~l~~~~ 323 (356)
+++++|+++++..
T Consensus 337 ~lii~Gv~lYs~~ 349 (350)
T PTZ00343 337 AVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999998754
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.95 E-value=1.4e-26 Score=210.39 Aligned_cols=248 Identities=9% Similarity=-0.007 Sum_probs=184.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCC-----CCCCcHHH-HHHHHHHHHH
Q 018400 12 LPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSE-----RPQLTFSI-LCSFFLLSVF 85 (356)
Q Consensus 12 ~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~ 85 (356)
+|++++++++++||.++++.|. .+ +++|..++++|.+++.+++.++..+++++. .++.++++ +......|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 5889999999999999999998 45 699999999999999888776654433211 11112232 4456667777
Q ss_pred HHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCC
Q 018400 86 GCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELS 165 (356)
Q Consensus 86 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~ 165 (356)
.+.++.++++|++++++++++++.++.|+++.+++++++|||++++ ++++++++++|++++.. +.
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~--~~------- 144 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIV--LK------- 144 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHH--Hc-------
Confidence 7999999999999999999999999999999999999999999999 99999999999998752 10
Q ss_pred CCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 018400 166 HSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGL 245 (356)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 245 (356)
+ + . ..++++++++||.|.+..|+..++ + ....... .........+... ...........+
T Consensus 145 ----------~-~-~----~~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~ 204 (256)
T TIGR00688 145 ----------G-S-L----PWEALVLAFSFTAYGLIRKALKNT-D-LAGFCLE-TLSLMPVAIYYLL-QTDFATVQQTNP 204 (256)
T ss_pred ----------C-C-c----hHHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHH-HHHHHHHHHHHHH-HhccCcccccCc
Confidence 0 1 1 135788999999999999987543 2 3222211 1111112111111 111111111112
Q ss_pred hhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHH
Q 018400 246 DIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVI 297 (356)
Q Consensus 246 ~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~ 297 (356)
...|..+++.|+. +.++|.+|++++|+.|+++++++.+++|+++.++++++
T Consensus 205 ~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 205 FPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred hhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 2368888888875 88999999999999999999999999999999999864
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.94 E-value=3.1e-24 Score=197.63 Aligned_cols=282 Identities=18% Similarity=0.278 Sum_probs=215.8
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-H
Q 018400 9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-C 87 (356)
Q Consensus 9 ~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~ 87 (356)
+........++.++.|+......|...++..++....+.|...+.++..+.....+ ...++ ..+++....+.+.++ .
T Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~ 81 (292)
T COG0697 4 ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEP-RGLRP-ALRPWLLLLLLALLGLA 81 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhc-ccccc-cccchHHHHHHHHHHHH
Confidence 34567788888889999999999999883266767777799988877444322111 11111 112244455555555 9
Q ss_pred HHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHH-HHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCC
Q 018400 88 SSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAI-IFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSH 166 (356)
Q Consensus 88 ~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~-~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~ 166 (356)
.++.+++.++++++++.++.+.++.|+++.++++ +++|||++++ ++.++.++++|++++...+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~~-------- 147 (292)
T COG0697 82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGGG-------- 147 (292)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCCc--------
Confidence 9999999999999999999999999999999997 7779999999 999999999999999631111
Q ss_pred CCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHH-HHHHHHHHHHHHHHHHHhcCCCcccccc
Q 018400 167 SGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMF-YLFFFNTILSTAFALIVVSEPSDWKLGL 245 (356)
Q Consensus 167 ~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 245 (356)
+... ...|+.+.+++++++|.+.+..|+.. +.+ +..... +... ............. .. ....
T Consensus 148 ---------~~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~--~~~~~~~~~~~~~-~~--~~~~ 210 (292)
T COG0697 148 ---------GGIL-SLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLL--LALLLLLLFFLSG-FG--APIL 210 (292)
T ss_pred ---------chhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHH--HHHHHHHHHHhcc-cc--ccCC
Confidence 0111 57899999999999999999999887 553 555555 3333 2222222221211 11 1222
Q ss_pred hhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400 246 DIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG 323 (356)
Q Consensus 246 ~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~ 323 (356)
...+..+.+.|++++++++.+|++++++.++..++.+.+++|+++.+++++++||+++..+++|+.+++.|+.+...+
T Consensus 211 ~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 211 SRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 346888889999899899999999999999999999999999999999999999999999999999999999998655
No 14
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.91 E-value=1.8e-22 Score=173.90 Aligned_cols=274 Identities=12% Similarity=0.054 Sum_probs=226.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 018400 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIF 92 (356)
Q Consensus 13 ~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 92 (356)
+++.++.+++.--....+.|...+ ...+..++.+|..+++++++++. + +.++++++++++.....|...+..|++
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP-~vG~~g~t~lRl~~aaLIll~l~--R--Pwr~r~~~~~~~~~~~yGvsLg~MNl~ 87 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFP-LVGAAGVTALRLAIAALILLALF--R--PWRRRLSKPQRLALLAYGVSLGGMNLL 87 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHcc-ccChhhHHHHHHHHHHHHHHHHh--h--HHHhccChhhhHHHHHHHHHHHHHHHH
Confidence 688888888888888889999998 79999999999999999888742 2 234567889999999999999999999
Q ss_pred HHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCc
Q 018400 93 SFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRR 172 (356)
Q Consensus 93 ~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~ 172 (356)
+|.+++..|.+.+..+.++-|+.+.+++. | |. + ..+.+.+++.|+.++.- .++
T Consensus 88 FY~si~riPlGiAVAiEF~GPL~vA~~~s---R-r~--~------d~vwvaLAvlGi~lL~p-~~~-------------- 140 (292)
T COG5006 88 FYLSIERIPLGIAVAIEFTGPLAVALLSS---R-RL--R------DFVWVALAVLGIWLLLP-LGQ-------------- 140 (292)
T ss_pred HHHHHHhccchhhhhhhhccHHHHHHHhc---c-ch--h------hHHHHHHHHHHHHhhee-ccC--------------
Confidence 99999999999999999999988766532 2 22 2 57788889999998862 222
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHH
Q 018400 173 LLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAV 252 (356)
Q Consensus 173 ~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (356)
+....++.|..+++.++.||+.|.+..+|..+..+ ...-+...+.++.++..|+..-..+ ....++.-...-
T Consensus 141 ---~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag----~~l~~p~ll~la 212 (292)
T COG5006 141 ---SVWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAG----PALFSPSLLPLA 212 (292)
T ss_pred ---CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcc----hhhcChHHHHHH
Confidence 23456788999999999999999999999987775 7778888899999999999873322 111122234455
Q ss_pred HHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecccc
Q 018400 253 LYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSK 326 (356)
Q Consensus 253 ~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~ 326 (356)
+..++.++.+.|.+-..++++.|..+.+.+..+||.++.+.+++++||.+|+.||.|...|+++..-..+..+|
T Consensus 213 LgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~ 286 (292)
T COG5006 213 LGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK 286 (292)
T ss_pred HHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence 67888999999999999999999999999999999999999999999999999999999999988766654443
No 15
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.91 E-value=1.6e-22 Score=178.71 Aligned_cols=281 Identities=12% Similarity=0.040 Sum_probs=222.8
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCC-C--CCcHHHHHHHHHHHHH
Q 018400 9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER-P--QLTFSILCSFFLLSVF 85 (356)
Q Consensus 9 ~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~-~--~~~~~~~~~~~~~g~~ 85 (356)
...+|++..+.+.++||..+...|... ..++.++...|...+.+++..+....+++.. . ..++|.+..+.+.+..
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~--~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKLLE--PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 456899999999999999999999984 5899999999999999888776655544221 1 1244667777777777
Q ss_pred HHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCC
Q 018400 86 GCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELS 165 (356)
Q Consensus 86 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~ 165 (356)
-..+...|.+|.++..+-++++-++..|++.++++++++|||+++. |+++++++.+|+...+...|.
T Consensus 82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g~------- 148 (293)
T COG2962 82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLGS------- 148 (293)
T ss_pred HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcCC-------
Confidence 7999999999999999999999999999999999999999999999 999999999999998752221
Q ss_pred CCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 018400 166 HSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGL 245 (356)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 245 (356)
-. ...+.=+++|+.|-.+.|+. +.+ +.+-...-+..-....+...+..+...+.....+
T Consensus 149 --------------lp----wval~la~sf~~Ygl~RK~~--~v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~ 207 (293)
T COG2962 149 --------------LP----WVALALALSFGLYGLLRKKL--KVD-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNA 207 (293)
T ss_pred --------------Cc----HHHHHHHHHHHHHHHHHHhc--CCc-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCC
Confidence 11 24456678999999877764 443 5555554444444444444443333221111123
Q ss_pred hhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400 246 DIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS 325 (356)
Q Consensus 246 ~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~ 325 (356)
...+..+...|. .|.+...++..+.++.|-+..+.+.|.+|..-.+++++++||+++..+++..++|..|+.++.+..-
T Consensus 208 ~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l 286 (293)
T COG2962 208 NSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGL 286 (293)
T ss_pred chHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 346777788887 7889999999999999999999999999999999999999999999999999999999999886544
Q ss_pred c
Q 018400 326 K 326 (356)
Q Consensus 326 ~ 326 (356)
+
T Consensus 287 ~ 287 (293)
T COG2962 287 Y 287 (293)
T ss_pred H
Confidence 3
No 16
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.89 E-value=2.7e-21 Score=178.44 Aligned_cols=273 Identities=13% Similarity=0.103 Sum_probs=207.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 018400 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIF 92 (356)
Q Consensus 13 ~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 92 (356)
++++.++++++||.+.+..|... +.++.++. |..++.+++..+....+++. +..++.+..-++.|++-..++.+
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~w~ig~~~ 75 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAFWALGQIN 75 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHHHHhhhhh
Confidence 57888999999999999999874 67777664 77777776665544443211 11234555566666667899999
Q ss_pred HHHHhhccChhhHhHhhh-hhHHHHHHHHHHHhhccccccccccccc----hhhHHHHhhhhhhheeccCCCCccCCCCC
Q 018400 93 SFVGIQYSSPTLSTAMLN-LIPAFTFVLAIIFRLEKLNWENKSSQAK----SLGTFASIGGAFVVTFYKGPPLIGELSHS 167 (356)
Q Consensus 93 ~~~al~~~~~~~a~~l~~-~~Pv~~~lls~~~l~e~~~~~~~~~~~~----~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~ 167 (356)
++.+.++++.+.+..+.+ ++|++..+.+.+++|||.+++ + .+|++++++|++++...+++..
T Consensus 76 ~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~------- 142 (290)
T TIGR00776 76 QFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSA------- 142 (290)
T ss_pred HHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEecccccc-------
Confidence 999999999999999988 899999999999999999999 9 9999999999998863211110
Q ss_pred CCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHH----HHHHHHHHHHHHHhcCCCcccc
Q 018400 168 GSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFF----FNTILSTAFALIVVSEPSDWKL 243 (356)
Q Consensus 168 ~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~ 243 (356)
.+++..+..+|.+++++++++|+.|.+..|+. ++ |+....+.+.. .+.++..+. . ...++
T Consensus 143 ------~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~---~--~~~~~-- 206 (290)
T TIGR00776 143 ------GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGH---I--LAKPL-- 206 (290)
T ss_pred ------ccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHH---h--cccch--
Confidence 00001334779999999999999999999976 45 48877555444 333333222 1 11112
Q ss_pred cchhhHHHHHHHHHHhhHHHHhHHHhhhc-cCCCceeeccchhHHHHHHHHHHHHhcCcccchhh----hhHHHHHHhhh
Q 018400 244 GLDIGLVAVLYSAVIGTGFRVGLCTWCLS-RTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSL----IGAMIIVAGFY 318 (356)
Q Consensus 244 ~~~~~~~~l~~~g~~~~~~~~~~~~~al~-~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~----iG~~li~~g~~ 318 (356)
..+..+..++ .|++ .++++.+|..+.+ +.++++++.+...+|+.+.++++++++|+.+..++ +|+++++.|+.
T Consensus 207 ~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~ 284 (290)
T TIGR00776 207 KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAAN 284 (290)
T ss_pred HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHH
Confidence 1222343444 8886 7999999999999 99999999999999999999999999999999999 99999999998
Q ss_pred hhee
Q 018400 319 AVMW 322 (356)
Q Consensus 319 l~~~ 322 (356)
+...
T Consensus 285 l~~~ 288 (290)
T TIGR00776 285 ILGI 288 (290)
T ss_pred HHhc
Confidence 8654
No 17
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.89 E-value=1.7e-24 Score=187.39 Aligned_cols=291 Identities=15% Similarity=0.143 Sum_probs=222.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCC-CCCcHHHHHHHHHHHHHHHHH
Q 018400 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER-PQLTFSILCSFFLLSVFGCSS 89 (356)
Q Consensus 11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~ 89 (356)
.+|.++..+. ..+..+.++++... +.+|....-.|.+.-.+...++..+++..-+ |+ .....++++|+.|..+
T Consensus 37 ~~gl~l~~vs-~ff~~~~vv~t~~~--e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~---g~R~~LiLRg~mG~tg 110 (346)
T KOG4510|consen 37 NLGLLLLTVS-YFFNSCMVVSTKVL--ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPE---GKRKWLILRGFMGFTG 110 (346)
T ss_pred ccCceehhhH-HHHhhHHHhhhhhh--ccChhHhhhhhhhhehhhhheEEEEEeeeeecCC---CcEEEEEeehhhhhhH
Confidence 4566666666 66666777777665 4699999999977666666665444443221 22 3344567889999888
Q ss_pred HHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCC
Q 018400 90 QIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGS 169 (356)
Q Consensus 90 ~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~ 169 (356)
..+.|+|++|++.++|+++..++|+||.+++|.++|||.++. +.++..+.+.|+++++ +++.+++..+++.
T Consensus 111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIv--RPpFlFG~~t~g~- 181 (346)
T KOG4510|consen 111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIV--RPPFLFGDTTEGE- 181 (346)
T ss_pred HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEe--cCCcccCCCcccc-
Confidence 899999999999999999999999999999999999999999 9999999999999997 6666554421111
Q ss_pred CCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhH
Q 018400 170 PRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGL 249 (356)
Q Consensus 170 ~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 249 (356)
+++..+...+|.+.++.++++.|--.++.|+..++.+ ......|...++++...+.....+. -.++. ...+|
T Consensus 182 ----~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~ig~--~~lP~-cgkdr 253 (346)
T KOG4510|consen 182 ----DSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASIGA--VQLPH-CGKDR 253 (346)
T ss_pred ----ccccccccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhccc--eecCc-cccce
Confidence 1111244566788889999998888888999888886 5555566666777766665543321 12221 22367
Q ss_pred HHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400 250 VAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS 325 (356)
Q Consensus 250 ~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~ 325 (356)
+.+..+|+ .+.+++.+.+.++++-.+..++++.+.+.++|.++++++|+|.||.+.|.|+++++.+.......|.
T Consensus 254 ~l~~~lGv-fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw 328 (346)
T KOG4510|consen 254 WLFVNLGV-FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW 328 (346)
T ss_pred EEEEEehh-hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence 77788888 6778999999999999999999999999999999999999999999999999999988777654443
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.83 E-value=5.1e-18 Score=157.86 Aligned_cols=280 Identities=16% Similarity=0.194 Sum_probs=215.8
Q ss_pred HHHHHHHHHhC-CCC--hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccChh
Q 018400 27 NMEVIKAAMSK-GIN--KYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPT 103 (356)
Q Consensus 27 ~~~~~k~~~~~-~~~--~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~ 103 (356)
...+.+..... +.. |..+.+..++...++..+.....+ +++.++..++.++..+++...+..+.+.|++|.+.+
T Consensus 15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p 91 (303)
T PF08449_consen 15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYP 91 (303)
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChH
Confidence 44555555542 334 778888888887776665444333 122234567788888888899999999999999999
Q ss_pred hHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHH
Q 018400 104 LSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWIL 183 (356)
Q Consensus 104 ~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (356)
.-.++.++.|+++++++.+++|+|.+++ +++++++..+|+++....+...- +..++....+..
T Consensus 92 ~~~~~ks~~~i~vmi~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~-----------~~~~~~~~~~~~ 154 (303)
T PF08449_consen 92 TQIVFKSSKPIPVMILGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSS-----------SSSNSSSFSSAL 154 (303)
T ss_pred HHHHHhhhHHHHHHHHHHHhcCccccHH------HHHHHHHHHhhHheeeecccccc-----------cccccccccchh
Confidence 9999999999999999999999999999 99999999999999875322210 011112222344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHH--hcCCCccc--ccchhhHHHHHHHHHH
Q 018400 184 GGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIV--VSEPSDWK--LGLDIGLVAVLYSAVI 258 (356)
Q Consensus 184 G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~--~~~~~~~~~l~~~g~~ 258 (356)
|+++.+++.++.|...++++|..++++ ++.+.+++...++.+...+..... ++....++ ...+..+..++...+
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~- 233 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL- 233 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-
Confidence 999999999999999999999988764 588999999999999888887752 22111111 111223444555554
Q ss_pred hhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccccc
Q 018400 259 GTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKE 327 (356)
Q Consensus 259 ~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~ 327 (356)
++.++....++..++.++...++...+.-+++++++++++|+++++.+|+|.++++.|..++.+.|+|+
T Consensus 234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 667778888889999999999999999999999999999999999999999999999999998877665
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.82 E-value=1.2e-18 Score=158.19 Aligned_cols=225 Identities=22% Similarity=0.273 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCc
Q 018400 82 LSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLI 161 (356)
Q Consensus 82 ~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~ 161 (356)
...+.+..++.+..|+.+++++..+++.+++-+||.+++.++-.||+++. |.+++++++.|+++++..+.++
T Consensus 165 fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~~-- 236 (416)
T KOG2765|consen 165 FCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSKQ-- 236 (416)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEeccccc--
Confidence 33444999999999999999999999999999999999999999999999 9999999999999998532221
Q ss_pred cCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---hhHHHHHHHHHHHHHHHHHHHHHHhc-C
Q 018400 162 GELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA---AVLIIMFYLFFFNTILSTAFALIVVS-E 237 (356)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~-~ 237 (356)
.++........|+++++++++.||+|.++.||...++. |-.....+..++..+++.|..++... .
T Consensus 237 -----------~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~ 305 (416)
T KOG2765|consen 237 -----------NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFG 305 (416)
T ss_pred -----------cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhc
Confidence 11233445678999999999999999999998876652 23344445566666666655543321 2
Q ss_pred CCcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhh
Q 018400 238 PSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGF 317 (356)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~ 317 (356)
....+.++......++..++++++++-++|.+|.--.++..+..-+.++.+.+.+.+.++-|.++++.+++|...|++|.
T Consensus 306 ~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~F 385 (416)
T KOG2765|consen 306 EERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGF 385 (416)
T ss_pred cCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 23345555556667778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheeccc
Q 018400 318 YAVMWGKS 325 (356)
Q Consensus 318 ~l~~~~~~ 325 (356)
..++..+.
T Consensus 386 v~vn~~~~ 393 (416)
T KOG2765|consen 386 VIVNISSE 393 (416)
T ss_pred hheecccc
Confidence 99887654
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.75 E-value=8.6e-18 Score=153.93 Aligned_cols=289 Identities=16% Similarity=0.141 Sum_probs=221.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh--CCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 018400 14 SVGMVIVLLAQVSNMEVIKAAMS--KGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQI 91 (356)
Q Consensus 14 ~~~~ll~~~~~g~~~~~~k~~~~--~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 91 (356)
+++.....++-.......|+.++ ..--|..+.......+.+.......+...+..+..++..++..+.+|++.+++..
T Consensus 19 ~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v 98 (316)
T KOG1441|consen 19 GIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHV 98 (316)
T ss_pred HHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHH
Confidence 33344444444445556688887 3344777777766666665555444433322222244678889999999999999
Q ss_pred HHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCC
Q 018400 92 FSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPR 171 (356)
Q Consensus 92 ~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~ 171 (356)
+-..++++.+++....+..++|+++.++++++.+|+.++. .++.+...+.|+.+.+.
T Consensus 99 ~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~----------------- 155 (316)
T KOG1441|consen 99 LGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASV----------------- 155 (316)
T ss_pred hcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeee-----------------
Confidence 9999999999999999999999999999999999999999 89999999999998864
Q ss_pred ccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH--hhc-hhHHHHHHHHHHHHHHHH-HHHHHHhcCCCc-ccc-cc
Q 018400 172 RLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILR--KFA-AVLIIMFYLFFFNTILST-AFALIVVSEPSD-WKL-GL 245 (356)
Q Consensus 172 ~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~-~~~-~~ 245 (356)
.+.+.+..|.+.+.++.+.+++.+++.|+..+ +++ |+++...++.-.+.+.++ |.....+++... +.. .+
T Consensus 156 ----~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~ 231 (316)
T KOG1441|consen 156 ----TELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPW 231 (316)
T ss_pred ----ccccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeecccc
Confidence 23446688999999999999999999999984 322 699999999999999999 777655554330 010 11
Q ss_pred hhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400 246 DIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS 325 (356)
Q Consensus 246 ~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~ 325 (356)
+.......+..+ +...-...-+..+.+++|.+.++.+.+.-++.++.++++|+++.++.+..|+++-++|++++.+.|.
T Consensus 232 ~~~~~~~~~~sv-~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~ 310 (316)
T KOG1441|consen 232 FVTFLILLLNSV-LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKL 310 (316)
T ss_pred chhhHHHHHHHH-HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence 122333333332 4444445566889999999999999999999999999999999999999999999999999998777
Q ss_pred ccccc
Q 018400 326 KEEKT 330 (356)
Q Consensus 326 ~~~~~ 330 (356)
++++.
T Consensus 311 ~~~~~ 315 (316)
T KOG1441|consen 311 KEKKG 315 (316)
T ss_pred hhhcc
Confidence 65543
No 21
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.72 E-value=1.3e-17 Score=144.01 Aligned_cols=252 Identities=14% Similarity=0.098 Sum_probs=199.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHH
Q 018400 40 NKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVL 119 (356)
Q Consensus 40 ~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~ll 119 (356)
.|..-.+..+.+-+++..++..++++ . -...|++++++++...-.|++...|.||++...+.++-.-....+.++
T Consensus 47 ~Pt~QtFl~Y~LLalVY~~~~~fR~~--~---~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~l 121 (336)
T KOG2766|consen 47 APTSQTFLNYVLLALVYGPIMLFRRK--Y---IKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVL 121 (336)
T ss_pred CccHHHHHHHHHHHHHHhhHHHhhhH--H---HHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHH
Confidence 47778888898888888888776652 1 224577789999888888888999999999999999988888888899
Q ss_pred HHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHH
Q 018400 120 AIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWF 199 (356)
Q Consensus 120 s~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~ 199 (356)
+|+++|.|..+. |+.|+.+|+.|++++++.+-. +.+-.++.+-.+|+.+.++++-+||..+
T Consensus 122 sw~fLktrYrlm------ki~gV~iCi~GvvmvV~sDV~-------------agd~aggsnp~~GD~lvi~GATlYaVSN 182 (336)
T KOG2766|consen 122 SWFFLKTRYRLM------KISGVVICIVGVVMVVFSDVH-------------AGDRAGGSNPVKGDFLVIAGATLYAVSN 182 (336)
T ss_pred HHHHHHHHHhhh------eeeeEEeEecceEEEEEeeec-------------cccccCCCCCccCcEEEEecceeeeecc
Confidence 999999999999 999999999999999852211 1112334566789999999999999999
Q ss_pred HHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCcee
Q 018400 200 ILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYV 279 (356)
Q Consensus 200 v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~ 279 (356)
+..+.+.++.+ ..+.+....++|+++..+-.. .+... .....++......+. ..++..+-|.+.-..+|..+++..
T Consensus 183 v~EEflvkn~d-~~elm~~lgLfGaIIsaIQ~i-~~~~~-~~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~ 258 (336)
T KOG2766|consen 183 VSEEFLVKNAD-RVELMGFLGLFGAIISAIQFI-FERHH-VSTLHWDSAIFLYLR-FALTMFLLYSLAPILIKTNSATMF 258 (336)
T ss_pred ccHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHh-hhccc-eeeEeehHHHHHHHH-HHHHHHHHHHhhHHheecCCceEE
Confidence 99999999985 999999999999999887743 43321 111111112222222 333566667777788999999999
Q ss_pred eccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhe
Q 018400 280 SMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM 321 (356)
Q Consensus 280 s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~ 321 (356)
+.-..+.-.+++++ -.||-+.++...+..+.+..|.+++.
T Consensus 259 nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 259 NLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYS 298 (336)
T ss_pred EhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence 99999999999998 56788899999999999999999884
No 22
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.64 E-value=2.2e-15 Score=116.94 Aligned_cols=134 Identities=13% Similarity=0.151 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCC-CCcHHHHHHHHHHHHHHHHHHH
Q 018400 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERP-QLTFSILCSFFLLSVFGCSSQI 91 (356)
Q Consensus 13 ~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~ 91 (356)
..++.+++++++|...++.|...+ ++||..-.+.|.....+++..+....++...+ .+++|.|....+.|+.++.+..
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl 82 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL 82 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence 567899999999999999999998 89999999999999888888877666653322 2577899999999988899999
Q ss_pred HHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 92 FSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 92 ~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
+||.|++...++.+..+..++|+++.+++++++|||+|.+ +++|+.+.++|++++.
T Consensus 83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs 138 (140)
T COG2510 83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999999 9999999999999875
No 23
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.62 E-value=1.1e-14 Score=112.98 Aligned_cols=136 Identities=14% Similarity=0.108 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHH
Q 018400 184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFR 263 (356)
Q Consensus 184 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 263 (356)
..++++++++++++..++.|--.++. ||..-++.+.++..+++..+...... .......+...|..+...|+ .++++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSGl-a~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSGL-AGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHHH-HHHHH
Confidence 46889999999999999999999988 59999999999988888777764433 22222224557888888896 89999
Q ss_pred HhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhee
Q 018400 264 VGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMW 322 (356)
Q Consensus 264 ~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~ 322 (356)
..+|+++++..+++.+.++.-+.|+++++++++++||+++..+++|+++|++|.++...
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999988653
No 24
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.61 E-value=3.1e-13 Score=121.63 Aligned_cols=299 Identities=15% Similarity=0.126 Sum_probs=227.3
Q ss_pred chhhHHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHH--HHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHH
Q 018400 4 DMGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIV--YSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFL 81 (356)
Q Consensus 4 ~~~~~~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~--~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (356)
+..+.+..+++...+.-++.-..+-+..|.++..+--|..+.. ++.+.+.+.+...-. .+--..++++++..++++.
T Consensus 4 ~~~~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~-~~lv~~~~l~~~~~kk~~P 82 (314)
T KOG1444|consen 4 DEGSKKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKR-LGLVNFRPLDLRTAKKWFP 82 (314)
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH-hceeecCCcChHHHHHHcc
Confidence 3345555666777776667677777888999874322444444 777777666655322 2212346788999999999
Q ss_pred HHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCc
Q 018400 82 LSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLI 161 (356)
Q Consensus 82 ~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~ 161 (356)
..++-....+.-..+++|.++...+++-+.+|+++++....++|.|+++. .+.++....+|......
T Consensus 83 ~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~------- 149 (314)
T KOG1444|consen 83 VSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAF------- 149 (314)
T ss_pred HHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhcc-------
Confidence 99988888888889999999999999999999999999999999999999 89999988888877652
Q ss_pred cCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcCC--
Q 018400 162 GELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEP-- 238 (356)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~-- 238 (356)
.+......|..+++...++-+.+.+..|+..+..+ +....++|..+.+...+.+..+++++-.
T Consensus 150 --------------~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l 215 (314)
T KOG1444|consen 150 --------------TDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDAL 215 (314)
T ss_pred --------------ccceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHH
Confidence 22233345899999999999999999998765432 4667888999999999888887665411
Q ss_pred --CcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHh
Q 018400 239 --SDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAG 316 (356)
Q Consensus 239 --~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g 316 (356)
..........+..+...++.+.++.|.. .++.+..++++.++++...-..+.+-..+++|++.++.-.+|..+-+.|
T Consensus 216 ~~~~~~~~~~~~~~~~~lScv~gf~isy~s-~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~g 294 (314)
T KOG1444|consen 216 SLNFDNWSDSSVLVVMLLSCVMGFGISYTS-FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFG 294 (314)
T ss_pred HhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhh
Confidence 0101112234677778888666665555 4899999999999999888888888888888889999999999999999
Q ss_pred hhhheeccccccccc
Q 018400 317 FYAVMWGKSKEEKTT 331 (356)
Q Consensus 317 ~~l~~~~~~~~~~~~ 331 (356)
-.++.+.+.++++.+
T Consensus 295 gv~Y~~~~~~~k~~~ 309 (314)
T KOG1444|consen 295 GVLYSYATFRKKKQP 309 (314)
T ss_pred hhHHhhhhhhhccCC
Confidence 999988776555544
No 25
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.60 E-value=2.7e-12 Score=117.19 Aligned_cols=295 Identities=13% Similarity=0.137 Sum_probs=210.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCC---CChhHHHHHHHHHHHHHHHHHHHHhccC----CCCC------CcHHHHHH
Q 018400 12 LPSVGMVIVLLAQVSNMEVIKAAMSKG---INKYVIIVYSDALSSLFFLFCSFLFHRS----ERPQ------LTFSILCS 78 (356)
Q Consensus 12 ~~~~~~ll~~~~~g~~~~~~k~~~~~~---~~~~~~~~~r~~~~~~~l~~~~~~~~~~----~~~~------~~~~~~~~ 78 (356)
.-++.++...+.++...+..|+....+ +.|-..++.--.+-.++...+.+...++ ..+. .++++.++
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 567778888899999999999998755 5566666666666665555554444221 1111 24456777
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCC
Q 018400 79 FFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGP 158 (356)
Q Consensus 79 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~ 158 (356)
..+-+++..+.|.+.+.++.+.+++...+..++-.+-|++++.+++|+|.+++ ||.++++...|+.++-....+
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~~ 168 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSLS 168 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCCC
Confidence 77788888888889999999999999999999999999999999999999999 999999999999998411111
Q ss_pred CCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 018400 159 PLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSE 237 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~ 237 (356)
. ....+....++.+.|....+.+++.-+...++.+|..++-+ +....+.-..++|.++.+...+....+
T Consensus 169 ~----------~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~ 238 (345)
T KOG2234|consen 169 P----------TGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGE 238 (345)
T ss_pred C----------CCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 0 11111344567788999999999999999999999987643 244555555566666665555433222
Q ss_pred CCccc----ccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHH
Q 018400 238 PSDWK----LGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMII 313 (356)
Q Consensus 238 ~~~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li 313 (356)
...|. ..+...|..++..++. =.+-....|+.+-..=+....+..+++.+.++.++|-++|....+|..++
T Consensus 239 ~i~~~gff~G~s~~vw~vVl~~a~g-----GLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lV 313 (345)
T KOG2234|consen 239 AINEYGFFYGYSSIVWLVVLLNAVG-----GLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLV 313 (345)
T ss_pred ccccCCccccccHHHHHHHHHHhcc-----chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHH
Confidence 21111 1122245555544442 22333345666655556666688999999999999999999999999999
Q ss_pred HHhhhhheeccccc
Q 018400 314 VAGFYAVMWGKSKE 327 (356)
Q Consensus 314 ~~g~~l~~~~~~~~ 327 (356)
+.++.++...++++
T Consensus 314 i~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 314 ILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHhhcCCccc
Confidence 99999998554443
No 26
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.58 E-value=9.9e-14 Score=118.72 Aligned_cols=258 Identities=13% Similarity=0.143 Sum_probs=193.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHH
Q 018400 42 YVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAI 121 (356)
Q Consensus 42 ~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~ 121 (356)
...+++....-.++.=.+..++++ .+.++..-+.+...+.-........+.|+||.+=....+-.+.-|+=+++++.
T Consensus 54 laLVf~qC~~N~vfAkvl~~ir~~---~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGV 130 (337)
T KOG1580|consen 54 LALVFFQCTANTVFAKVLFLIRKK---TEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGV 130 (337)
T ss_pred HHHHHHHHHHHHHHHHhheeeccc---ccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeeh
Confidence 344455555444443332222222 22333334455555555567777788999999988888999999999999999
Q ss_pred HHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 018400 122 IFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFIL 201 (356)
Q Consensus 122 ~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~ 201 (356)
.+.|.+.+|+ +...+...++|+++..+ ++.. +++.++.....|.++.+++-..-++....
T Consensus 131 l~~~KsY~w~------kY~cVL~IV~GValFmY-K~~K-------------v~g~e~~t~g~GElLL~lSL~mDGlTg~~ 190 (337)
T KOG1580|consen 131 LFAHKSYHWR------KYCCVLMIVVGVALFMY-KENK-------------VGGAEDKTFGFGELLLILSLAMDGLTGSI 190 (337)
T ss_pred hhhcccccHH------HHHHHHHHHHHHHHhhc-cccc-------------cCCCcccccchHHHHHHHHHHhcccchhH
Confidence 9999999999 99999999999999874 4221 22344566788999999999888888888
Q ss_pred HHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcCCC--cccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCce
Q 018400 202 QALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEPS--DWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLY 278 (356)
Q Consensus 202 ~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~ 278 (356)
+.+....+. ....++++..+.+.+.+..-.++.++-+. .+....+..|+-+..+++ ++.+++.+.+.-+...+|.+
T Consensus 191 Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLt 269 (337)
T KOG1580|consen 191 QDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPLT 269 (337)
T ss_pred HHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCee
Confidence 887766543 36678888899888887666554433111 111112234666777787 89999999999999999999
Q ss_pred eeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400 279 VSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG 323 (356)
Q Consensus 279 ~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~ 323 (356)
-|++....-.|+++.++++++++++..||+|.++++.|+..-...
T Consensus 270 CSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~ 314 (337)
T KOG1580|consen 270 CSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVD 314 (337)
T ss_pred EEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhc
Confidence 999999999999999999999999999999999999998876543
No 27
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.54 E-value=2.8e-14 Score=114.53 Aligned_cols=124 Identities=17% Similarity=0.322 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HHHHHHHHHHhhcc
Q 018400 22 LAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSSQIFSFVGIQYS 100 (356)
Q Consensus 22 ~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~ 100 (356)
++||...++.|...+ +.||....++|+..+.+ +.++..+.+++..++.+++++......|.++ ..++.+++.|+++.
T Consensus 1 ~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLK-KISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhc-cCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 469999999999998 79999999999999998 6665555555444566778888889999987 99999999999999
Q ss_pred ChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 101 SPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 101 ~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
+++.++.+.++.|+++.+++++++||+++++ ++.|+++++.|++++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999998864
No 28
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.52 E-value=6.1e-12 Score=111.94 Aligned_cols=252 Identities=19% Similarity=0.231 Sum_probs=186.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcc---CCCCCCcHHHHHH-HHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHH
Q 018400 41 KYVIIVYSDALSSLFFLFCSFLFHR---SERPQLTFSILCS-FFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFT 116 (356)
Q Consensus 41 ~~~~~~~r~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~ 116 (356)
|..++.+..+.-.++........++ +.+.+.+|++..+ ....++.++....+..++++|++.+.-++..+.+++|.
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI 124 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI 124 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence 6677766665554444433333332 2234567776554 45566777999999999999999999999999999999
Q ss_pred HHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHH
Q 018400 117 FVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNS 196 (356)
Q Consensus 117 ~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a 196 (356)
.+++.++.-||++|. -..-+.+..+|+++.++ ++ ++....|..+..++.++-+
T Consensus 125 llFs~if~lEk~~w~------L~l~v~lI~~Glflft~-Ks--------------------Tqf~i~Gf~lv~~aS~~sG 177 (349)
T KOG1443|consen 125 LLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTY-KS--------------------TQFNIEGFFLVLAASLLSG 177 (349)
T ss_pred HHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEe-cc--------------------cceeehhHHHHHHHHHhhh
Confidence 999999999999999 77777777888888774 32 3345678888888888888
Q ss_pred HHHHHHHHHHHhhc----hhHHHHHHHHHHHHHHHHHHHHHHhcCCCc-----ccccch-hhHHHHHHHHHHhhHHHHhH
Q 018400 197 AWFILQALILRKFA----AVLIIMFYLFFFNTILSTAFALIVVSEPSD-----WKLGLD-IGLVAVLYSAVIGTGFRVGL 266 (356)
Q Consensus 197 ~~~v~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~~~-~~~~~l~~~g~~~~~~~~~~ 266 (356)
+-..++++..++.+ +|....+...-...+.++|..+..|+.... +..... ..+..+..+++ +..+++.+
T Consensus 178 lRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l 256 (349)
T KOG1443|consen 178 LRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLL 256 (349)
T ss_pred hhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHH
Confidence 87777777766642 578888888888888888888878774321 221111 12333333333 33344433
Q ss_pred ---HHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhh
Q 018400 267 ---CTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAV 320 (356)
Q Consensus 267 ---~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~ 320 (356)
-+..+.+++..+.++.+-..-+-+.+++..+.+|.++..-|+|..+...|+.++
T Consensus 257 ~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 257 EFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 345688999999999999999999999999999999999999999999999988
No 29
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.50 E-value=3e-12 Score=114.87 Aligned_cols=225 Identities=15% Similarity=0.189 Sum_probs=165.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhh
Q 018400 72 TFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (356)
Q Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l 151 (356)
++|+..++.+.+++..+.+.+.+.++++++++.-.++.++-.++|++++++++|+|++++ ||.++.+.++|+.+
T Consensus 13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~l 86 (244)
T PF04142_consen 13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVVL 86 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHhe
Confidence 457888889999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred heeccCCCCccCCCCCCCCCcc-CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHH
Q 018400 152 VTFYKGPPLIGELSHSGSPRRL-LLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTA 229 (356)
Q Consensus 152 v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~ 229 (356)
+-. ++... . +..+.+.. .+....+...|.+..++++++-++..++.+|..|+.+ +...........+.++.++
T Consensus 87 v~~-~~~~~-~---~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~ 161 (244)
T PF04142_consen 87 VQL-SSSQS-S---DNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLL 161 (244)
T ss_pred eec-CCccc-c---ccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Confidence 853 11110 0 00000000 1112345678999999999999999999999988863 3556666667777777666
Q ss_pred HHHHHhcCC----CcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccch
Q 018400 230 FALIVVSEP----SDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLG 305 (356)
Q Consensus 230 ~~~~~~~~~----~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~ 305 (356)
.....+.+. .-++.-+...|..++ .+.++=.+....+|+.+...=+.-..+..+.+.+.+++++|.+++..
T Consensus 162 ~~~~~~~~~~~~~g~f~G~~~~~~~~i~-----~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~ 236 (244)
T PF04142_consen 162 ALLLSDGSAISESGFFHGYSWWVWIVIF-----LQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLS 236 (244)
T ss_pred HHhcccccccccCCchhhcchHHHHHHH-----HHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchH
Confidence 654332211 111111111232222 33333444556688888888888888999999999999999999999
Q ss_pred hhhhHHH
Q 018400 306 SLIGAMI 312 (356)
Q Consensus 306 ~~iG~~l 312 (356)
..+|+.+
T Consensus 237 f~lg~~~ 243 (244)
T PF04142_consen 237 FLLGAAL 243 (244)
T ss_pred Hhhheec
Confidence 9999865
No 30
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.46 E-value=1.8e-11 Score=109.08 Aligned_cols=264 Identities=14% Similarity=0.153 Sum_probs=202.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHH
Q 018400 40 NKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVL 119 (356)
Q Consensus 40 ~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~ll 119 (356)
++...++...+.+.++-... +..++.. .-.++.|.++...++...++..|-+.|++|.+=..-.+--++--+-+++.
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~--l~~~k~~-~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlm 126 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAM--LKWWKKE-LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLM 126 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHH--Hhccccc-CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHH
Confidence 46666677766666655433 2322222 22346788889899999999999999999999888888888877778899
Q ss_pred HHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHH
Q 018400 120 AIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWF 199 (356)
Q Consensus 120 s~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~ 199 (356)
..++.|.|.++. +.+..++.-+|+.+...++..+- ......++.+.|..++...-++-+..+
T Consensus 127 g~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~s------------~~~~g~~ns~~G~~Ll~~~L~fDgfTn 188 (327)
T KOG1581|consen 127 GTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSDS------------SSKSGRENSPIGILLLFGYLLFDGFTN 188 (327)
T ss_pred HHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCCC------------ccccCCCCchHhHHHHHHHHHHHhhHH
Confidence 999999999999 99999999999999876543321 112334577899999999999999999
Q ss_pred HHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcCC-Cc--ccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCC
Q 018400 200 ILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEP-SD--WKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTG 275 (356)
Q Consensus 200 v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~--~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~ 275 (356)
..+.++.++.. .+..++++..+++.+....... ..+.. .. .-...+..+.-++.... +..+++.+-++-+++.+
T Consensus 189 ~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li-~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FG 266 (327)
T KOG1581|consen 189 ATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLI-LQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFG 266 (327)
T ss_pred hHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhh-cCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhcc
Confidence 99998888643 4889999999999988766633 22211 11 11111223445555565 66788888889999999
Q ss_pred CceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecccc
Q 018400 276 PLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSK 326 (356)
Q Consensus 276 ~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~ 326 (356)
+.+.+.++.+.-++++.++.+.+|++++..||+|..+++.|+.+-...|+|
T Consensus 267 slt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 267 SLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999887665554
No 31
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.45 E-value=2.3e-13 Score=109.11 Aligned_cols=125 Identities=22% Similarity=0.367 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHHhHHHhhhc
Q 018400 193 FMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLS 272 (356)
Q Consensus 193 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~ 272 (356)
++||.+.+..|+..++.+ +....++++..+.+ ..+...+..... ....+...+...++.+++++.+++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 478999999999999985 99999999999998 666665554432 22333346777888888888999999999999
Q ss_pred cCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhe
Q 018400 273 RTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM 321 (356)
Q Consensus 273 ~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~ 321 (356)
+.+++.++++.+++|+++.++++++++|+++..+++|+.+++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988753
No 32
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.29 E-value=1e-10 Score=106.20 Aligned_cols=133 Identities=12% Similarity=0.115 Sum_probs=113.0
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCh--hHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH
Q 018400 9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINK--YVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG 86 (356)
Q Consensus 9 ~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~--~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 86 (356)
...+|.++.++++++|+...+..|...+ +.++ .....+++..+.+++.+..+..++. +..+.+++...+..++++
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 201 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLVK-KEGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG 201 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH
Confidence 3467999999999999999999999986 5664 4455577888888888876654432 233667777788888888
Q ss_pred -HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhh
Q 018400 87 -CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAF 150 (356)
Q Consensus 87 -~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~ 150 (356)
...+.++++++++.+++.++.+.++.|+++.+++++++||+++.. ++.|..+.+.|+.
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~~ 260 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhcC
Confidence 899999999999999999999999999999999999999999999 9999999998863
No 33
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.22 E-value=3.8e-09 Score=94.76 Aligned_cols=237 Identities=16% Similarity=0.133 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHhccCCCCCCc--HHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhh-hhHHHHHHHHHHHhhcc
Q 018400 51 LSSLFFLFCSFLFHRSERPQLT--FSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLN-LIPAFTFVLAIIFRLEK 127 (356)
Q Consensus 51 ~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~-~~Pv~~~lls~~~l~e~ 127 (356)
++++++..+.++.++ |.++ .+.+...++.|++..+++...+.+.++.+++.+..+.. ++-+.+.+.+.++++|.
T Consensus 21 ~Gali~alv~~~~~~---p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW 97 (269)
T PF06800_consen 21 IGALIFALVVFLFRQ---PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEW 97 (269)
T ss_pred HHHHHHHHHHHHHhC---CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCC
Confidence 344444444444443 4444 37888888899999999999999999999999999975 78888999999999998
Q ss_pred ccccccccccch----hhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 018400 128 LNWENKSSQAKS----LGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQA 203 (356)
Q Consensus 128 ~~~~~~~~~~~~----~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~ 203 (356)
-+.. ++ +++++.++|+.+.+. +++.. ...++..+...|....+++.+.|..|.+..|
T Consensus 98 ~~~~------~~~~G~~Al~liiiGv~lts~-~~~~~------------~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~ 158 (269)
T PF06800_consen 98 TTTT------QKIIGFLALVLIIIGVILTSY-QDKKS------------DKSSSKSNMKKGILALLISTIGYWIYSVIPK 158 (269)
T ss_pred CCcc------hHHHHHHHHHHHHHHHHHhcc-ccccc------------cccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 8876 44 377788888888764 22210 0012245667899999999999999999876
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccc
Q 018400 204 LILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFK 283 (356)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~ 283 (356)
. .+. |+....+-+.+--.+....+..+.+. ...+ +..|.. +..|+ .-.++..+|..+.++.+.+..=.+.
T Consensus 159 ~--~~~-~~~~~~lPqaiGm~i~a~i~~~~~~~--~~~~---k~~~~n-il~G~-~w~ignl~~~is~~~~G~a~af~lS 228 (269)
T PF06800_consen 159 A--FHV-SGWSAFLPQAIGMLIGAFIFNLFSKK--PFFE---KKSWKN-ILTGL-IWGIGNLFYLISAQKNGVATAFTLS 228 (269)
T ss_pred h--cCC-ChhHhHHHHHHHHHHHHHHHhhcccc--cccc---cchHHh-hHHHH-HHHHHHHHHHHhHHhccchhhhhHH
Confidence 5 344 36666654433333333333332211 1111 112322 23444 4567788889999999999999999
Q ss_pred hhHHHHHHHHHHHHhcCcccch----hhhhHHHHHHhhhh
Q 018400 284 PLAIVFSIVMDVVIVGDAFCLG----SLIGAMIIVAGFYA 319 (356)
Q Consensus 284 ~~~pv~a~~~~~~~~ge~~~~~----~~iG~~li~~g~~l 319 (356)
-+.++++.+.+.++++|+=+.. .++|+++++.|..+
T Consensus 229 Q~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 229 QLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 9999999999999999987754 55788888887654
No 34
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.20 E-value=6.7e-11 Score=93.61 Aligned_cols=102 Identities=22% Similarity=0.348 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHHHhccCC--CCCCcHHHHHHHHHHHHHH-HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHH
Q 018400 46 VYSDALSSLFFLFCSFLFHRSE--RPQLTFSILCSFFLLSVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAII 122 (356)
Q Consensus 46 ~~r~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~ 122 (356)
.+|+..+.+++..+...+++.. .+..+++.+......|+++ ..++.++++|+++.+ +.++.+.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 5789999888888776654421 1223345566777778888 699999999999999 58889999999999999999
Q ss_pred HhhccccccccccccchhhHHHHhhhhhhhee
Q 018400 123 FRLEKLNWENKSSQAKSLGTFASIGGAFVVTF 154 (356)
Q Consensus 123 ~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~ 154 (356)
++|||++++ ++.+++++++|++++..
T Consensus 81 ~~~er~~~~------~~~a~~l~~~Gv~li~~ 106 (113)
T PF13536_consen 81 FFKERLSPR------RWLAILLILIGVILIAW 106 (113)
T ss_pred HhcCCCCHH------HHHHHHHHHHHHHHHhh
Confidence 999999999 99999999999999964
No 35
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.11 E-value=4.2e-10 Score=95.96 Aligned_cols=278 Identities=15% Similarity=0.133 Sum_probs=194.4
Q ss_pred HHHHHHHHHhC-CCC-hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccChhh
Q 018400 27 NMEVIKAAMSK-GIN-KYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTL 104 (356)
Q Consensus 27 ~~~~~k~~~~~-~~~-~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~ 104 (356)
+-+..|+.++. +++ -+.+.+.+.+.+.+-++.+-. .+--..+. ++...++..+++.....+..-.+++|.+...
T Consensus 21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~-l~~~~fR~---t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpi 96 (309)
T COG5070 21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKF-LRLVEFRL---TKAKKWFPISFLLVVMIYTSSKSLQYLAVPI 96 (309)
T ss_pred HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHH-HhHhheeh---hhhhhhcCHHHHHHHHHHhcccceeeeeeeH
Confidence 33445666542 333 345556666655554444322 22111122 3333344455555566666678999999999
Q ss_pred HhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHH
Q 018400 105 STAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILG 184 (356)
Q Consensus 105 a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 184 (356)
-++..+++.+..+.....++|.|++.. ...+.++.++.-+.-. .++. +. ........+.|
T Consensus 97 YTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~--w~D~---------q~---~~~~~~~lN~G 156 (309)
T COG5070 97 YTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVAT--WGDQ---------QA---SAFKAQILNPG 156 (309)
T ss_pred HHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhc--cchh---------hH---HHHHhcccCCc
Confidence 999999999999999999999999999 8999888887766654 2221 00 01122356779
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcCCCc-ccccchh-hHHHHHHHHHHhhH
Q 018400 185 GFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEPSD-WKLGLDI-GLVAVLYSAVIGTG 261 (356)
Q Consensus 185 ~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~g~~~~~ 261 (356)
.+++...++.-++|....|+-.+-.+ ....-++|....+..+++...+++++..+. .....+. ...+++..|+ ++.
T Consensus 157 Y~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl-~sv 235 (309)
T COG5070 157 YLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL-CSV 235 (309)
T ss_pred eEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH-HHh
Confidence 99999999999999988887544321 256678999999999999999877652211 1111111 2456667777 666
Q ss_pred HHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccccccc
Q 018400 262 FRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEEK 329 (356)
Q Consensus 262 ~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~~ 329 (356)
.--++-.|+++..+.++.++++.+.-.-..+-|.+++||+.+...+....+=..+..++...|.++++
T Consensus 236 giSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q 303 (309)
T COG5070 236 GISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ 303 (309)
T ss_pred hhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66778889999999999999999999999999999999999999999888877777777666554433
No 36
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.11 E-value=1.1e-09 Score=100.83 Aligned_cols=133 Identities=11% Similarity=0.165 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHH
Q 018400 185 GFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRV 264 (356)
Q Consensus 185 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 264 (356)
.++.++++++||..++.+|+..++.+ +. .++....+.++..+...... ....|+.... .+......+.......+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYL-AQVGWSRLPA-TFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhc-ccCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence 46789999999999999998877754 43 35555666666666665321 1223433223 33334444444778889
Q ss_pred hHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhee
Q 018400 265 GLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMW 322 (356)
Q Consensus 265 ~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~ 322 (356)
.++++++++.+++.++++.++.|+++.+++++++||+++..+++|..++++|+.+...
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999988764
No 37
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.10 E-value=3.9e-09 Score=92.93 Aligned_cols=242 Identities=14% Similarity=0.135 Sum_probs=165.1
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc-cChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhh
Q 018400 69 PQLTFSILCSFFLLSVFGCSSQIFSFVGIQY-SSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIG 147 (356)
Q Consensus 69 ~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~-~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~ 147 (356)
++++.|++...... -+..+.+-.+++++ .+...=.++-+-.++-+++++++++|.|.+.+ |..++.+.-+
T Consensus 60 ~kiplk~Y~i~V~m---FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~------Qy~Sv~~iTi 130 (330)
T KOG1583|consen 60 PKIPLKDYAITVAM---FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLR------QYSSVLMITI 130 (330)
T ss_pred CCCchhhhheehhe---eeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehh------hhhhHHhhhh
Confidence 55566665443322 23444455577777 44445556667899999999999999999999 9999999999
Q ss_pred hhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHH
Q 018400 148 GAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTIL 226 (356)
Q Consensus 148 Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~ 226 (356)
|+++.++.+.++...- ++.=.+..+.++...+..|..+...+-+.-|.-.++++...+++. ++.+.++|....+...
T Consensus 131 GiiIcTl~s~~d~~~~--~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~ 208 (330)
T KOG1583|consen 131 GIIICTLFSSKDGRSK--LSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPL 208 (330)
T ss_pred hheeEEeecCcchhhh--hcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccch
Confidence 9999987655443320 000011112234456678988888888888888888887777764 5889999999888776
Q ss_pred HHHHHH--------HHhcCC---CcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHH
Q 018400 227 STAFAL--------IVVSEP---SDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDV 295 (356)
Q Consensus 227 ~~~~~~--------~~~~~~---~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~ 295 (356)
++...- ...++. +......+..|+.++...+ .+..+.---+..-.+.++.++++...+.-.++.+++.
T Consensus 209 Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~Si 287 (330)
T KOG1583|consen 209 FLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-TQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSI 287 (330)
T ss_pred HHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-HHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhhee
Confidence 644320 001110 0011112223555444433 3333333344456778889999999999999999999
Q ss_pred HHhcCcccchhhhhHHHHHHhhhhhee
Q 018400 296 VIVGDAFCLGSLIGAMIIVAGFYAVMW 322 (356)
Q Consensus 296 ~~~ge~~~~~~~iG~~li~~g~~l~~~ 322 (356)
+.|+.++++..|+|..++..|.+++..
T Consensus 288 iyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 288 IYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred eEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988763
No 38
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.10 E-value=1.9e-10 Score=100.91 Aligned_cols=281 Identities=15% Similarity=0.074 Sum_probs=193.5
Q ss_pred HHHHHHHHhC---CC-ChhHHHHHHHHHHHHHHHHHHHHhcc----CCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018400 28 MEVIKAAMSK---GI-NKYVIIVYSDALSSLFFLFCSFLFHR----SERP--QLTFSILCSFFLLSVFGCSSQIFSFVGI 97 (356)
Q Consensus 28 ~~~~k~~~~~---~~-~~~~~~~~r~~~~~~~l~~~~~~~~~----~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al 97 (356)
-...|+.++. .+ .|..+..+..+....+-..+.+...+ ...| +++.+..+...-+.+.-.....+-...+
T Consensus 44 vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL 123 (347)
T KOG1442|consen 44 VFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCL 123 (347)
T ss_pred hhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceeh
Confidence 3455666552 12 36666777766655444433332222 1112 2444455555555544433344444788
Q ss_pred hccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCC
Q 018400 98 QYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSP 177 (356)
Q Consensus 98 ~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (356)
+|.+++---+--+++.+|+.+++++++|+|-+.. -..+-.+.++| +.+. -+++ +..
T Consensus 124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~------~~~~C~lIi~G-F~lG---vdqE--------------~~~ 179 (347)
T KOG1442|consen 124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFF------ALGCCLLIILG-FGLG---VDQE--------------GST 179 (347)
T ss_pred hhcceEEEEeccchhhhHHHHhHHhhcccccccc------cceeehhheeh-heec---cccc--------------ccc
Confidence 9999998888889999999999999999999988 44444443333 2221 1110 123
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhch-hHHHHHHHHHHHHHHHHHHHHHHhcCCC--ccccc-chhhHHHHH
Q 018400 178 QLSWILGGFFLAAEAFMNSAWFILQALILRKFAA-VLIIMFYLFFFNTILSTAFALIVVSEPS--DWKLG-LDIGLVAVL 253 (356)
Q Consensus 178 ~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~-~~~~~~~l~ 253 (356)
+.-.+.|.++...+.++-|+..+.+||......| -...++|....+.++++|...+-++-.. .++.. ....|..+.
T Consensus 180 ~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mt 259 (347)
T KOG1442|consen 180 GTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMT 259 (347)
T ss_pred CccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHH
Confidence 4556889999999999999999999987665543 5678889999999999988875433111 22222 334577777
Q ss_pred HHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccccccccccc
Q 018400 254 YSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEEKTTED 333 (356)
Q Consensus 254 ~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~~~~~~ 333 (356)
..|+++..++|.. .+-+|.++|.+.++-....-..-.+++..+++|.-+..-|-|-++++.|...+.+.|.++.+++.+
T Consensus 260 LsglfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~ 338 (347)
T KOG1442|consen 260 LSGLFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASA 338 (347)
T ss_pred HHHHHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhcc
Confidence 7888666665544 367899999999999999999999999999999999999999999999999998887766555443
No 39
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.10 E-value=1.4e-09 Score=90.62 Aligned_cols=138 Identities=14% Similarity=0.171 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh------chhHHHHHHHHHHHHHHHHHHHHHHhcCCCccc---cc------chhh
Q 018400 184 GGFFLAAEAFMNSAWFILQALILRKF------AAVLIIMFYLFFFNTILSTAFALIVVSEPSDWK---LG------LDIG 248 (356)
Q Consensus 184 G~~~~l~s~~~~a~~~v~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~------~~~~ 248 (356)
|.++++.+.++.|++.++.|+..++. .|+.....+....+.+++.+...+.+.+..... .. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67899999999999999999987772 269999999999999999999987766431110 00 1123
Q ss_pred HHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhee
Q 018400 249 LVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMW 322 (356)
Q Consensus 249 ~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~ 322 (356)
+..++..|+ .........+..+++.+|.+.++...+..+..++.+++++||+++..+++|.++.++|.+++++
T Consensus 81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 445555565 4556667777999999999999999999999999999999999999999999999999998764
No 40
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.06 E-value=1.7e-09 Score=100.45 Aligned_cols=138 Identities=14% Similarity=0.114 Sum_probs=110.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCccc--ccchhhHHHHHHHHH
Q 018400 180 SWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWK--LGLDIGLVAVLYSAV 257 (356)
Q Consensus 180 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~ 257 (356)
+..+|.+++++++++|+...+..|.. .+.+ +.+..+++..++.+++.+......+ ..... ......+ .....+.
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKI-FMLAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHH-HHHHHHH
Confidence 45689999999999999999999765 6675 9999999999998877766553321 11110 0011222 2233555
Q ss_pred HhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhe
Q 018400 258 IGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM 321 (356)
Q Consensus 258 ~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~ 321 (356)
+..+..+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 5777889999999999999999999999999999999999999999999999999999988765
No 41
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.06 E-value=3.1e-09 Score=89.08 Aligned_cols=212 Identities=19% Similarity=0.219 Sum_probs=154.1
Q ss_pred HHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCC
Q 018400 85 FGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEL 164 (356)
Q Consensus 85 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~ 164 (356)
+....++.|..|++..+++.++.+..+...|+.+++++.+|+|+... ++++.++++.|++++.+.+
T Consensus 62 ~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~D-------- 127 (290)
T KOG4314|consen 62 FWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYAD-------- 127 (290)
T ss_pred EEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEecc--------
Confidence 33678899999999999999999999999999999999999999999 9999999999999997522
Q ss_pred CCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--hhHHHHHHHHHHHHHHH--HHHHHHHhcCCCc
Q 018400 165 SHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA--AVLIIMFYLFFFNTILS--TAFALIVVSEPSD 240 (356)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~v~~--~~~~~~~~~~~~~ 240 (356)
+.....+.|...+..+++..|+|-++-|+.....+ |.-..+.-..++..++. .++.+.. .+...
T Consensus 128 -----------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~-T~VE~ 195 (290)
T KOG4314|consen 128 -----------NEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAF-TGVEH 195 (290)
T ss_pred -----------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHH-hchHH
Confidence 23446688999999999999999999998876542 22222222222222222 2222211 12222
Q ss_pred ccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhh
Q 018400 241 WKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAV 320 (356)
Q Consensus 241 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~ 320 (356)
|..-....|..+...+.+.... .++-+.++....|...|+-+....+-....+.++-+-..+.....|..+|+.|.++.
T Consensus 196 ~qsFA~~PWG~l~G~A~L~lAF-N~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLi 274 (290)
T KOG4314|consen 196 LQSFAAAPWGCLCGAAGLSLAF-NFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILI 274 (290)
T ss_pred HHHHhhCCchhhhhHHHHHHHH-hhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhe
Confidence 3211122455554444333322 344567788888999999888999999999998766678889999999999999887
Q ss_pred eec
Q 018400 321 MWG 323 (356)
Q Consensus 321 ~~~ 323 (356)
...
T Consensus 275 iiP 277 (290)
T KOG4314|consen 275 IIP 277 (290)
T ss_pred ecc
Confidence 643
No 42
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.04 E-value=1.4e-07 Score=88.04 Aligned_cols=296 Identities=11% Similarity=0.046 Sum_probs=180.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCC--hhHHHHHHHHHHHHHHHHHHHHhccC---CCCCCcHHHHHHHHHHHH
Q 018400 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGIN--KYVIIVYSDALSSLFFLFCSFLFHRS---ERPQLTFSILCSFFLLSV 84 (356)
Q Consensus 10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~--~~~~~~~r~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~g~ 84 (356)
-..|+++.+++.++||+.++-.|.. + ..+ .+..+ .-.+...+.-+....+..+. ...+.+.+.+...++.|+
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~~-k-~w~wE~~W~v-~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~ 81 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKKV-K-KWSWETMWSV-GGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA 81 (345)
T ss_pred hHHHHHHHHHHHHHhhccccccccc-C-CCchhHHHHH-HHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence 5679999999999999999999994 3 333 22221 11111111111111111110 113346677888888888
Q ss_pred HHHHHHHHHHHHhhccChhhHhHhhh-hhHHHHHHHHHHHhhccc---cccccccccchhhHHHHhhhhhhheeccCCCC
Q 018400 85 FGCSSQIFSFVGIQYSSPTLSTAMLN-LIPAFTFVLAIIFRLEKL---NWENKSSQAKSLGTFASIGGAFVVTFYKGPPL 160 (356)
Q Consensus 85 ~~~~~~~~~~~al~~~~~~~a~~l~~-~~Pv~~~lls~~~l~e~~---~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~ 160 (356)
+-.+++..++.++++.+.+.+..+.. ++-++..++..++++|-. +-. ..+.-.+|+++.++|+++... .+..-
T Consensus 82 ~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~--~g~~~~~gv~liliGi~l~s~-Ag~~k 158 (345)
T PRK13499 82 LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATN--GGRMTLLGVLVALIGVAIVGR-AGQLK 158 (345)
T ss_pred HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccc--hHHHHHHHHHHHHHHHHHHHH-hhhhc
Confidence 88999999999999999999988855 899999999999998754 222 233367889999999999874 11100
Q ss_pred ccCCCCCCCCCccCC--CCCcchHHHHHHHHHHHHHHHHHH-------HHHHHHH-HhhchhHHHHHHHHH---HHHHHH
Q 018400 161 IGELSHSGSPRRLLL--SPQLSWILGGFFLAAEAFMNSAWF-------ILQALIL-RKFAAVLIIMFYLFF---FNTILS 227 (356)
Q Consensus 161 ~~~~~~~~~~~~~~~--~~~~~~~~G~~~~l~s~~~~a~~~-------v~~~~~~-~~~~~~~~~~~~~~~---~~~v~~ 227 (356)
+.+.++ +++.+..+|.++++++.+.++.|. ...+... .+. |+.....-+.. .+..+.
T Consensus 159 ---------~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~-~~~~~~lp~~~~~~~G~~~~ 228 (345)
T PRK13499 159 ---------ERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGV-DPLYAALPSYVVIMGGGAIT 228 (345)
T ss_pred ---------ccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCC-CchHHHHHHHHHHHHHHHHH
Confidence 000000 234567899999999999999999 3333211 112 23332222222 333322
Q ss_pred -HHHHHH---HhcCCCcc-cccc-----hhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeec---cc-hhHHHHHHHH
Q 018400 228 -TAFALI---VVSEPSDW-KLGL-----DIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSM---FK-PLAIVFSIVM 293 (356)
Q Consensus 228 -~~~~~~---~~~~~~~~-~~~~-----~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~---~~-~~~pv~a~~~ 293 (356)
.....+ .+++.... +... ......-...|+ .=.++.++|..+-++.+...... +. .+..+++.++
T Consensus 229 n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw 307 (345)
T PRK13499 229 NLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW 307 (345)
T ss_pred HHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence 222221 11111101 1111 111112233444 56677888888888886655444 33 7777999999
Q ss_pred HHHHhcCccc------chhhhhHHHHHHhhhhheec
Q 018400 294 DVVIVGDAFC------LGSLIGAMIIVAGFYAVMWG 323 (356)
Q Consensus 294 ~~~~~ge~~~------~~~~iG~~li~~g~~l~~~~ 323 (356)
+.+ ++|.=+ ...++|+++++.|..+....
T Consensus 308 Gi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 308 GLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred hhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 995 899766 56789999999998887544
No 43
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.04 E-value=7.1e-09 Score=96.05 Aligned_cols=134 Identities=13% Similarity=0.072 Sum_probs=109.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HHH
Q 018400 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSS 89 (356)
Q Consensus 11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 89 (356)
..|.++.++++++|+...+..|...+ +.++..... -.+.+++++.++...... ....+...+...+..|+++ .+.
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~-~~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGA-EHGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence 45899999999999999999999976 677776654 445556666665544332 1223445555566788888 899
Q ss_pred HHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400 90 QIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF 154 (356)
Q Consensus 90 ~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~ 154 (356)
+.++++++++.+++.++.+.+++|+++.++++++++|+++.. +++|..+.+.|++....
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999 99999999999988863
No 44
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.03 E-value=8.1e-09 Score=95.63 Aligned_cols=135 Identities=15% Similarity=0.025 Sum_probs=112.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HHH
Q 018400 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSS 89 (356)
Q Consensus 11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 89 (356)
..|.++.++++++|+......|.... . ++.....++...+.+.+.+.............+...|......++++ .+.
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~ 226 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLPL-P-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA 226 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCC-C-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999743 2 34566678888888877776554332111112456788888888888 899
Q ss_pred HHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 90 QIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 90 ~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
+.+++.++++.++++++.+..+.|+++.++++++++|+++.. +++|..+.+.|+.+..
T Consensus 227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 9999999999998875
No 45
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.99 E-value=3.1e-08 Score=91.62 Aligned_cols=274 Identities=15% Similarity=0.153 Sum_probs=153.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HH
Q 018400 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CS 88 (356)
Q Consensus 10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~ 88 (356)
..-|.+..++++++-+....+.|.... ..+. .-.|. +++.++..+ ...++.|+.. ..
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~-r~~~---~~~~~--------------~~~~~~~l~----~~~W~~G~~~~~~ 62 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHL-RLPR---GSLRA--------------GSGGRSYLR----RPLWWIGLLLMVL 62 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhhc---ccccc--------------cchhhHHHh----hHHHHHHHHHHhc
Confidence 445888888888999988888888754 1111 00000 000011111 1234445555 67
Q ss_pred HHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCC
Q 018400 89 SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSG 168 (356)
Q Consensus 89 ~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~ 168 (356)
+..+.+.|+.+.|.+..+.+..+.-++..+++..++|||++++ .+.|..++++|..++..+.+++.+. .
T Consensus 63 g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~~~~~~~~-----~ 131 (300)
T PF05653_consen 63 GEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIFAPKEEPI-----H 131 (300)
T ss_pred chHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEeCCCCCCc-----C
Confidence 7788889999999999999999999999999999999999999 9999999999999887544322100 0
Q ss_pred CCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHH-------HHHHHHHhcCCCcc
Q 018400 169 SPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILS-------TAFALIVVSEPSDW 241 (356)
Q Consensus 169 ~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~-------~~~~~~~~~~~~~~ 241 (356)
+..+....-.+......+..... +...+.....+|..++. ...........++.-. ..+..... +..+.
T Consensus 132 t~~~l~~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~~~--i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~-g~~~f 207 (300)
T PF05653_consen 132 TLDELIALLSQPGFLVYFILVLV-LILILIFFIKPRYGRRN--ILVYISICSLIGSFTVLSAKAISILIKLTFS-GDNQF 207 (300)
T ss_pred CHHHHHHHhcCcceehhHHHHHH-HHHHHHHhhcchhcccc--eEEEEEEeccccchhhhHHHHHHHHHHHHhc-Cchhh
Confidence 00000000000001111111111 12222222223322221 1111111111111110 11111111 11111
Q ss_pred cccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHH-HHHHHHHHHhcCcc--cc----hhhhhHHHHH
Q 018400 242 KLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIV-FSIVMDVVIVGDAF--CL----GSLIGAMIIV 314 (356)
Q Consensus 242 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv-~a~~~~~~~~ge~~--~~----~~~iG~~li~ 314 (356)
..+..|..++.. +.+........++++++.+++.+.++.+..-. .+++-+.++++|.- +. ....|+.+++
T Consensus 208 --~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii 284 (300)
T PF05653_consen 208 --TYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIII 284 (300)
T ss_pred --hhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHH
Confidence 222345444444 33667777788899999999999988776654 45555677778743 33 3457888899
Q ss_pred Hhhhhheec
Q 018400 315 AGFYAVMWG 323 (356)
Q Consensus 315 ~g~~l~~~~ 323 (356)
.|+++....
T Consensus 285 ~GV~lL~~~ 293 (300)
T PF05653_consen 285 IGVFLLSSS 293 (300)
T ss_pred Hhhheeecc
Confidence 999988643
No 46
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.98 E-value=4.9e-09 Score=95.17 Aligned_cols=136 Identities=13% Similarity=0.137 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCC---Ccccccchhh-HHHHHHHHHH
Q 018400 183 LGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEP---SDWKLGLDIG-LVAVLYSAVI 258 (356)
Q Consensus 183 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~g~~ 258 (356)
+|.++.++++++|+...+..|. ..+.+ +.++.+++++++.+++.+......... ..++...... +..+...|+
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL- 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH-
Confidence 4788999999999999999997 45675 999999999999888766654332211 0111111112 334455565
Q ss_pred hhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhe
Q 018400 259 GTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM 321 (356)
Q Consensus 259 ~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~ 321 (356)
.....+.+++++++++++..++.+.++.|+++.++++++++|+++..+++|..+.++|+.+..
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999987664
No 47
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=98.97 E-value=2.6e-08 Score=87.99 Aligned_cols=279 Identities=15% Similarity=0.108 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHh---CCCC----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCC-------------cHHHHHHHHHHH
Q 018400 24 QVSNMEVIKAAMS---KGIN----KYVIIVYSDALSSLFFLFCSFLFHRSERPQL-------------TFSILCSFFLLS 83 (356)
Q Consensus 24 ~g~~~~~~k~~~~---~~~~----~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~~g 83 (356)
-.++-+++|++-+ ++.| |+.....-++.=..+++.+..++.+...+.- +.+ -..++.-.
T Consensus 15 Gs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lfl~Pa 93 (372)
T KOG3912|consen 15 GSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLFLPPA 93 (372)
T ss_pred ccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-cceecChH
Confidence 3456777787732 1222 5544444444444555555444444222110 111 11233345
Q ss_pred HHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccC
Q 018400 84 VFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGE 163 (356)
Q Consensus 84 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~ 163 (356)
++-..+..+.+.|+++++++.-..+-....+|+.+++.-+++.+++.+ ||+|+...++|++.+...+-..
T Consensus 94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~d~~~---- 163 (372)
T KOG3912|consen 94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSLDVHL---- 163 (372)
T ss_pred HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeeeeccc----
Confidence 666788888999999999999999999999999999999999999999 9999999999999986421110
Q ss_pred CCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhc---C--
Q 018400 164 LSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVS---E-- 237 (356)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~---~-- 237 (356)
..+.-++..+-..|+++.+.+=+..|..+++-+|..++.+ +|.....|..+++.+++-.++..+.. +
T Consensus 164 -------~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~s 236 (372)
T KOG3912|consen 164 -------VTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDS 236 (372)
T ss_pred -------ccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCc
Confidence 0001123345578999999999999999999999888754 69999999999997766555543321 1
Q ss_pred CC-cccccchhhHHH---------HHHHHHHhhHHHHhHHHh----hhccCCCceeeccchhHHHHHHHHHHHHhcCccc
Q 018400 238 PS-DWKLGLDIGLVA---------VLYSAVIGTGFRVGLCTW----CLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFC 303 (356)
Q Consensus 238 ~~-~~~~~~~~~~~~---------l~~~g~~~~~~~~~~~~~----al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~ 303 (356)
.+ ..+.. ..+|.- .++..+.+..++..+++. --|..++++=..+-.+...+-=+++.....|.+.
T Consensus 237 fS~~~~g~-~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~ 315 (372)
T KOG3912|consen 237 FSCNPRGV-LEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFH 315 (372)
T ss_pred CcCCCCcc-hhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHH
Confidence 10 11110 001110 112222233333444442 2455666666777777777777777888889999
Q ss_pred chhhhhHHHHHHhhhhhe
Q 018400 304 LGSLIGAMIIVAGFYAVM 321 (356)
Q Consensus 304 ~~~~iG~~li~~g~~l~~ 321 (356)
..|+.|.++.+.|+++++
T Consensus 316 llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 316 LLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999999986
No 48
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.96 E-value=1.6e-08 Score=93.88 Aligned_cols=132 Identities=16% Similarity=0.114 Sum_probs=103.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHH
Q 018400 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQ 90 (356)
Q Consensus 11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 90 (356)
..|.+++++++++|+...+..|...+ +.++..... ..+.+.+.+....... .....+...+...+..|+...+.+
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~-~~~~~~~~~---~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~~~~t~~~~ 229 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYAR-GKNGITLFF---ILTALALWIKYFLSPQ-PAMVFSLPAIIKLLLAAAAMGFGY 229 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccC-CCCchhHHH---HHHHHHHHHHHHHhcC-ccccCCHHHHHHHHHHHHHHHHHH
Confidence 45889999999999999999999865 567765432 2233333332223221 122345667777777775558899
Q ss_pred HHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 91 IFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 91 ~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
.++++++++.+++.++.+.++.|+++.++++++++|+++.. +++|.++.+.|+.+..
T Consensus 230 ~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 230 AAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCW 286 (295)
T ss_pred HHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHh
Confidence 99999999999999999999999999999999999999999 9999999999998875
No 49
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.89 E-value=2e-08 Score=80.89 Aligned_cols=120 Identities=13% Similarity=0.133 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHH
Q 018400 184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFR 263 (356)
Q Consensus 184 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 263 (356)
|.++.+.+.++-+...++-|+-.++.+ ....... . . ...... . .....++.|+++++++
T Consensus 3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~--~---~-~~~~~~-~-------------~p~~~i~lgl~~~~la 61 (129)
T PRK02971 3 GYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD--F---I-AALLAF-G-------------LALRAVLLGLAGYALS 61 (129)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH--H---H-HHHHHH-h-------------ccHHHHHHHHHHHHHH
Confidence 678889999999999999999888764 2221111 0 0 000000 0 1112467888899999
Q ss_pred HhHHHhhhccCCCceeeccchhHHHHHHHHHHH--HhcCcccchhhhhHHHHHHhhhhheecc
Q 018400 264 VGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVV--IVGDAFCLGSLIGAMIIVAGFYAVMWGK 324 (356)
Q Consensus 264 ~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~--~~ge~~~~~~~iG~~li~~g~~l~~~~~ 324 (356)
+.+|.+++++.|.+.+.++....++...+.++. ++||++|+.+++|..+|++|+++..+.+
T Consensus 62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999999999999998888888885 7999999999999999999999986543
No 50
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.89 E-value=6.4e-08 Score=91.84 Aligned_cols=136 Identities=10% Similarity=0.119 Sum_probs=101.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCh-hHHHHHHHHHHHHHHHHHHHHhccCCC----CCCcHHHHHHHHHHHHH
Q 018400 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINK-YVIIVYSDALSSLFFLFCSFLFHRSER----PQLTFSILCSFFLLSVF 85 (356)
Q Consensus 11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~-~~~~~~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~ 85 (356)
..|..++++++++|+...++.|.... .+++ ....++....+.+.+.+......+... ...+.. ....+..++.
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~-~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~ 265 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMS-EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence 34788899999999999999998877 5554 355556666555555444444322111 112222 2223334444
Q ss_pred HHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400 86 GCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF 154 (356)
Q Consensus 86 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~ 154 (356)
..+.+.++++++++.+++.++...++.|+++.++++++++|++++. +++|.++.+.|+.++..
T Consensus 266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMW 328 (358)
T ss_pred HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence 4668889999999999999999999999999999999999999999 99999999999999864
No 51
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.83 E-value=1.6e-07 Score=87.32 Aligned_cols=136 Identities=14% Similarity=0.137 Sum_probs=105.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCh---hHHHHHHHHHHHHHHHHHHHHhccCC-----CCCCcHHHHHHHHHH
Q 018400 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINK---YVIIVYSDALSSLFFLFCSFLFHRSE-----RPQLTFSILCSFFLL 82 (356)
Q Consensus 11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~---~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 82 (356)
..|.++.++++++|+...+..|...+ ..++ .....+-...+.+.+....+...... ....+...|...+..
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMS-HSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL 220 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-ccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence 46899999999999999999999764 2222 23333334443333333322222211 123466778888888
Q ss_pred HHHH-HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 83 SVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 83 g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
|++. .+.+.+++.++++.++++++.+..+.|++..++++++++|+++.. +++|..+.++|+.+..
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHh
Confidence 9888 899999999999999999999999999999999999999999999 9999999999998874
No 52
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.82 E-value=5.9e-08 Score=85.37 Aligned_cols=226 Identities=10% Similarity=0.117 Sum_probs=165.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheec
Q 018400 76 LCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFY 155 (356)
Q Consensus 76 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~ 155 (356)
|+.+..++.+......+..-++.|.+=..-.+...+--+=+++.+.++=+.|.++. ...+..+..+|.++.+.-
T Consensus 106 ~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLA 179 (367)
T KOG1582|consen 106 WRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLA 179 (367)
T ss_pred hhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhc
Confidence 55556666665555566666777776544445555544445667778888999999 899999999999998752
Q ss_pred cCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHH
Q 018400 156 KGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIV 234 (356)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~ 234 (356)
+.. .+.+.+..|..+.-++-++-|.--.+++|..+..+ ...++.++...++.+.++......
T Consensus 180 Ds~-----------------~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlT 242 (367)
T KOG1582|consen 180 DSQ-----------------TSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLT 242 (367)
T ss_pred ccc-----------------cCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhc
Confidence 221 12334457888887888888887778888888754 477889999999999888877765
Q ss_pred hcCCCcccccch---hhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHH
Q 018400 235 VSEPSDWKLGLD---IGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAM 311 (356)
Q Consensus 235 ~~~~~~~~~~~~---~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~ 311 (356)
++-.+.|+.-.. ......+.... .+.++...-...++..++.+++.+....-.+++++++++|..++|....-|..
T Consensus 243 ge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gl 321 (367)
T KOG1582|consen 243 GELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGL 321 (367)
T ss_pred ccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhH
Confidence 543444442221 13344444443 44566666667788899999999999999999999999999999999999999
Q ss_pred HHHHhhhhheeccc
Q 018400 312 IIVAGFYAVMWGKS 325 (356)
Q Consensus 312 li~~g~~l~~~~~~ 325 (356)
+++.|+++-.+.|+
T Consensus 322 lv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 322 LVVLGIYLNMYSKR 335 (367)
T ss_pred HHHHHHHhhcccCC
Confidence 99999999887774
No 53
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.73 E-value=3.5e-08 Score=77.99 Aligned_cols=107 Identities=13% Similarity=0.262 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHH
Q 018400 218 YLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVI 297 (356)
Q Consensus 218 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~ 297 (356)
+.+.++.+..........+-...+.......+...+..|++....++.++.+++++.++ .++++..+.|+++.++++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence 45556666666655543221111222222345566667776667899999999999994 88899999999999999999
Q ss_pred hcCcccchhhhhHHHHHHhhhhheeccc
Q 018400 298 VGDAFCLGSLIGAMIIVAGFYAVMWGKS 325 (356)
Q Consensus 298 ~ge~~~~~~~iG~~li~~g~~l~~~~~~ 325 (356)
++|+++..+++|..++++|+.+..+.+.
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999877544
No 54
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.69 E-value=6.5e-08 Score=85.93 Aligned_cols=209 Identities=11% Similarity=-0.025 Sum_probs=124.9
Q ss_pred hhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCC--cc------CCCCCCCCCcc
Q 018400 102 PTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPL--IG------ELSHSGSPRRL 173 (356)
Q Consensus 102 ~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~--~~------~~~~~~~~~~~ 173 (356)
........+..++++++..+...++|.++. |+++.++...|++.-...+.+.. .. ..+.+.+++
T Consensus 4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~-- 75 (222)
T TIGR00803 4 VPIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSA-- 75 (222)
T ss_pred ccchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCc--
Confidence 344556677888888888888888888877 88888888888775432110000 00 000000000
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHhcCC-CcccccchhhHHH
Q 018400 174 LLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEP-SDWKLGLDIGLVA 251 (356)
Q Consensus 174 ~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~ 251 (356)
.....++...|....+.+.++-+...+++++..++.+ ............+.+...........+. ..+... ..+..
T Consensus 76 ~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 153 (222)
T TIGR00803 76 KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--IGYPT 153 (222)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--cCCch
Confidence 0111235567777788888887888888887755542 1111112222222222111111111111 111100 00111
Q ss_pred HHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhh
Q 018400 252 VLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAV 320 (356)
Q Consensus 252 l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~ 320 (356)
..+.-++....+..+-.+.+|+.++...+....++++++.+++++++||+++..+++|..+++.|++++
T Consensus 154 ~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 154 AVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 111111245567777889999999999999999999999999999999999999999999999998764
No 55
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.63 E-value=1.3e-06 Score=72.69 Aligned_cols=133 Identities=17% Similarity=0.242 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC------CCChhHHHHHHHHHHHHHHHHHHHHhccCCC-CC---C-------cHHH
Q 018400 13 PSVGMVIVLLAQVSNMEVIKAAMSK------GINKYVIIVYSDALSSLFFLFCSFLFHRSER-PQ---L-------TFSI 75 (356)
Q Consensus 13 ~~~~~ll~~~~~g~~~~~~k~~~~~------~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~-~~---~-------~~~~ 75 (356)
|.++++.+.++.+.-.+..|..+++ ..++..+..+-...+.+++.+.+.+.++... +. . +.+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5678889999999999999998875 6889999999999999999888776654331 10 0 2244
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhh
Q 018400 76 LCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (356)
Q Consensus 76 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l 151 (356)
+...+..|+++...+.+.+..++++++-..+++...-.+.+.++++++++|+++.. ++.|+.++++|.++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence 55666667777999999999999999999999999999999999999999999999 99999999999876
No 56
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.60 E-value=3.4e-07 Score=85.19 Aligned_cols=138 Identities=17% Similarity=0.173 Sum_probs=106.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHHhccCC-CCC--------CcHHHHHH-
Q 018400 10 AALPSVGMVIVLLAQVSNMEVIKAAMSK-GINKYVIIVYSDALSSLFFLFCSFLFHRSE-RPQ--------LTFSILCS- 78 (356)
Q Consensus 10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~-~~~--------~~~~~~~~- 78 (356)
...|.++.+++++.|+...+..|...++ ++++..+..+....+++.+.|+........ .+. ........
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 3458999999999999999999998642 489999999999999888888776543211 010 00011111
Q ss_pred HHHHHHHH-HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 79 FFLLSVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 79 ~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
.+..+... ...+.+++.+++++++..+++...+.|+++.++++++++|+++.. +++|.++++.|+.+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHH
Confidence 22223222 444567788999999999999999999999999999999999999 9999999999999875
No 57
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.56 E-value=1.4e-06 Score=80.49 Aligned_cols=130 Identities=13% Similarity=0.101 Sum_probs=103.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHH---HHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH
Q 018400 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSD---ALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG 86 (356)
Q Consensus 10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 86 (356)
..+|+++.+++++.++......|.. +.+|....+... +++..++.+.. + + .+|. +.+..+..++.|++.
T Consensus 150 ~~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~--~-~-~~~~-~~~~~~~~~~~Gi~~ 221 (290)
T TIGR00776 150 FKKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH--I-L-AKPL-KKYAILLNILPGLMW 221 (290)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH--h-c-ccch-HHHHHHHHHHHHHHH
Confidence 3679999999999999999999976 468887744444 44444433321 1 1 1222 344555566688888
Q ss_pred HHHHHHHHHHhh-ccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccch----hhHHHHhhhhhhhe
Q 018400 87 CSSQIFSFVGIQ-YSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKS----LGTFASIGGAFVVT 153 (356)
Q Consensus 87 ~~~~~~~~~al~-~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~----~g~~l~~~Gv~lv~ 153 (356)
.+.+.+|+.+.+ +.+++.++.+.+..|+...+.+++++||+.+++ ++ +|.++.+.|+.++.
T Consensus 222 ~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 222 GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence 999999999999 999999999999999999999999999999999 99 99999999988874
No 58
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.52 E-value=4.1e-06 Score=76.78 Aligned_cols=133 Identities=15% Similarity=0.203 Sum_probs=105.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHH-HHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-H
Q 018400 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIV-YSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-C 87 (356)
Q Consensus 10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~-~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~ 87 (356)
...|..+.+++++.|+...+..|... ..++..... +.......+..+ ....... ...+.+.+......|+++ .
T Consensus 152 ~~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~g~~~~~ 226 (292)
T COG0697 152 SLLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLL--FFLSGFG-APILSRAWLLLLYLGVFSTG 226 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHH--HHhcccc-ccCCHHHHHHHHHHHHHHHH
Confidence 46799999999999999999999875 345555555 333322222222 1222111 334667888899999999 6
Q ss_pred HHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 88 SSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 88 ~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
..+.+++.+++..+++.++.+..+.|++..++++++++|+++.. +++|.++.+.|+.+..
T Consensus 227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~ 286 (292)
T COG0697 227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999 9999999999998875
No 59
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.50 E-value=2.7e-06 Score=80.84 Aligned_cols=139 Identities=12% Similarity=0.089 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhH
Q 018400 182 ILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTG 261 (356)
Q Consensus 182 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 261 (356)
..-.++.+.--.+...+++.+|...+..+-|.+.+.+++.++.++..+.......+....+ .....+..++..|++..
T Consensus 48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~~~- 125 (350)
T PTZ00343 48 WKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLCHL- 125 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHHHH-
Confidence 3344444545555566788889988888449999999999998876554331111111111 12235667777887444
Q ss_pred HHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhee
Q 018400 262 FRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMW 322 (356)
Q Consensus 262 ~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~ 322 (356)
..+...+.++++.+++.+.++..++|++++++++++++|+++..+++|.+++++|+.+...
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 4577777999999999999999999999999999999999999999999999999998763
No 60
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.49 E-value=6.2e-07 Score=70.44 Aligned_cols=67 Identities=15% Similarity=0.126 Sum_probs=62.0
Q ss_pred HHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhe
Q 018400 255 SAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM 321 (356)
Q Consensus 255 ~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~ 321 (356)
.++++.++++.++..++++.|.+.+-++..+.++++.+++++++||+++..+++|..++++|+.+..
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3446778899999999999999999999999999999999999999999999999999999998764
No 61
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.47 E-value=3.1e-08 Score=85.98 Aligned_cols=278 Identities=14% Similarity=0.105 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 018400 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIF 92 (356)
Q Consensus 13 ~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 92 (356)
.++.+++.++.||+.+.+.... +=+|.+-..--- ++++++..+.++.. .|..+.+.+..-++.|.+..++|..
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT-~GALifaiiv~~~~---~p~~T~~~~iv~~isG~~Ws~GQ~~ 75 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTT-LGALIFAIIVFLFV---SPELTLTIFIVGFISGAFWSFGQAN 75 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec---CCChhHhhhhcc-HHHHHHHHHHheee---cCccchhhHHHHHHhhhHhhhhhhh
Confidence 5678899999999998877655 335555543333 34444444444443 3455667777778888888999999
Q ss_pred HHHHhhccChhhHhHhhh-hhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCC
Q 018400 93 SFVGIQYSSPTLSTAMLN-LIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPR 171 (356)
Q Consensus 93 ~~~al~~~~~~~a~~l~~-~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~ 171 (356)
.+.|.++.+++.+..+.+ ++-+-+.+++.+.++|-.+... -+-..+++++.++|+.+-.. +.+.
T Consensus 76 Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~--~IlG~iAliliviG~~lTs~-~~~~------------ 140 (288)
T COG4975 76 QFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ--IILGFIALILIVIGIYLTSK-QDRN------------ 140 (288)
T ss_pred hhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh--HHHHHHHHHHHHHhheEeee-eccc------------
Confidence 999999999999999976 8889999999999999887661 00012355566667666553 2211
Q ss_pred ccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHH
Q 018400 172 RLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVA 251 (356)
Q Consensus 172 ~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (356)
+-.+++.++.-+|....+.|.+.|-.|.++.+... . |......- ...+.++.....-....+. .. .+..|..
T Consensus 141 nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v-~g~saiLP-qAiGMv~~ali~~~~~~~~-~~---~K~t~~n 212 (288)
T COG4975 141 NKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--V-DGLSAILP-QAIGMVIGALILGFFKMEK-RF---NKYTWLN 212 (288)
T ss_pred cccccChHhhhhheeeeeeeccceeeeEeeecccc--c-cchhhhhH-HHHHHHHHHHHHhhccccc-ch---HHHHHHH
Confidence 01123445567899999999999999999888653 3 23332222 2233333222222121111 11 1122322
Q ss_pred HHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchh----hhhHHHHHHhhhhhee
Q 018400 252 VLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGS----LIGAMIIVAGFYAVMW 322 (356)
Q Consensus 252 l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~----~iG~~li~~g~~l~~~ 322 (356)
...|+ .=+.+...+..+.++.+..+.=.+.-+..+++.+-+.++++|+=|..+ ++|.++++.|..+...
T Consensus 213 -ii~G~-~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~ 285 (288)
T COG4975 213 -IIPGL-IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI 285 (288)
T ss_pred -HhhHH-HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence 23454 445677778888888888888888888889999999999999887654 5788888888766543
No 62
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.44 E-value=1.2e-06 Score=68.86 Aligned_cols=68 Identities=16% Similarity=0.146 Sum_probs=61.9
Q ss_pred HHHHHHH-HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 80 FLLSVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 80 ~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
...++++ +.+..++..+++..|.+.+..+.++.|+++.+++++++|||++++ |++|+.+.++|++++.
T Consensus 40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence 3344455 889999999999999999999999999999999999999999999 9999999999999874
No 63
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.27 E-value=5.8e-06 Score=74.96 Aligned_cols=272 Identities=15% Similarity=0.102 Sum_probs=160.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HH
Q 018400 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CS 88 (356)
Q Consensus 10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~ 88 (356)
...|.+..+...++.|.++.+-|+... .... ... ..+...++.+ +. ..+..|++. .+
T Consensus 19 ~~~G~~LaissS~~Ig~sfilkKkgl~-r~~~---~~~--------------ra~~gg~~yl--~~--~~Ww~G~ltm~v 76 (335)
T KOG2922|consen 19 NIIGLVLAISSSIFIGSSFILKKKGLK-RAGA---SGL--------------RAGEGGYGYL--KE--PLWWAGMLTMIV 76 (335)
T ss_pred ceeeeeehhhccEEEeeehhhhHHHHH-HHhh---hcc--------------cccCCCcchh--hh--HHHHHHHHHHHH
Confidence 345777888888889999999888865 1110 000 1122222332 22 334457777 78
Q ss_pred HHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCC
Q 018400 89 SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSG 168 (356)
Q Consensus 89 ~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~ 168 (356)
+...-|.|+.+.|++..+.+..++-++.++++..++|||+++. ..+|..+|++|-.+++...+.+....
T Consensus 77 Gei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~haP~e~~i~----- 145 (335)
T KOG2922|consen 77 GEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVIHAPKEQEIE----- 145 (335)
T ss_pred HhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEEecCcccccc-----
Confidence 8888889999999999999999999999999999999999999 99999999999999986433221100
Q ss_pred CCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH----------HHHHHHHHhcCC
Q 018400 169 SPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTIL----------STAFALIVVSEP 238 (356)
Q Consensus 169 ~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~----------~~~~~~~~~~~~ 238 (356)
+..+....-.+...+.....+. ....+-....| +++. ...+..|..+.+.+- ...+-....+..
T Consensus 146 t~~el~~~~~~~~Fliy~~~ii--l~~~il~~~~~---p~~g-~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ 219 (335)
T KOG2922|consen 146 SVEEVWELATEPGFLVYVIIII--LIVLILIFFYA---PRYG-QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN 219 (335)
T ss_pred cHHHHHHHhcCccHHHHHHHHH--HHHHHHheeec---cccc-ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc
Confidence 0000000001111111111111 11111111222 1211 222233333333331 111222122211
Q ss_pred CcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhH-HHHHHHHHHHHhcCccc------chhhhhHH
Q 018400 239 SDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLA-IVFSIVMDVVIVGDAFC------LGSLIGAM 311 (356)
Q Consensus 239 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~-pv~a~~~~~~~~ge~~~------~~~~iG~~ 311 (356)
+. ..+..|..++.... +...-.-..++|++..+++.++++.+.. ..++++-+.+.|+|.-. .....|+.
T Consensus 220 -ql--~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ 295 (335)
T KOG2922|consen 220 -QL--FYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFV 295 (335)
T ss_pred -cc--ccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHH
Confidence 11 11235666665554 6667777788999999999998877654 45666778888887543 23568899
Q ss_pred HHHHhhhhheecc
Q 018400 312 IIVAGFYAVMWGK 324 (356)
Q Consensus 312 li~~g~~l~~~~~ 324 (356)
.++.|+.+....|
T Consensus 296 ti~~G~flL~~~k 308 (335)
T KOG2922|consen 296 TIFLGIFLLHRTK 308 (335)
T ss_pred HhhheeeEeeeec
Confidence 9999998885443
No 64
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.25 E-value=8.8e-06 Score=72.98 Aligned_cols=140 Identities=11% Similarity=0.108 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCccc-ccchhhHHHHHHHHHHhh
Q 018400 182 ILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWK-LGLDIGLVAVLYSAVIGT 260 (356)
Q Consensus 182 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~~~ 260 (356)
..|.++.+.+-+.|+.--.+.|.+ ++.+ +.++..++.+.+.++...+.....+....++ ...+..+......++. .
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence 469999999999999988888765 5665 8999999999999988777765433221122 1222346666666664 4
Q ss_pred HHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecc
Q 018400 261 GFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGK 324 (356)
Q Consensus 261 ~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~ 324 (356)
.....+|.|+........+|.-++..|.+.+++|.++++|+++..|++...+-.+|+....+..
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999999999999999999999999999999988876644
No 65
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.23 E-value=2.8e-05 Score=62.68 Aligned_cols=117 Identities=16% Similarity=0.173 Sum_probs=89.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HHHH
Q 018400 12 LPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSSQ 90 (356)
Q Consensus 12 ~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~ 90 (356)
.+++..++..++-+..-++.|..++ ..+....... . ...+. . .. .| ..++..|+.. .++.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~-~~g~~~~~~~-~-~~~~~--~---~~----~p-------~~~i~lgl~~~~la~ 62 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMS-RLPLLSHAWD-F-IAALL--A---FG----LA-------LRAVLLGLAGYALSM 62 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHh-hCCCccchhH-H-HHHHH--H---Hh----cc-------HHHHHHHHHHHHHHH
Confidence 3778888888888899999999987 4443332221 1 10000 0 00 01 1246677777 9999
Q ss_pred HHHHHHhhccChhhHhHhhhhhHHHHHHHHHH--HhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 91 IFSFVGIQYSSPTLSTAMLNLIPAFTFVLAII--FRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 91 ~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~--~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
.++..+++..+++.+..+.+..+.++.+.++. ++||++++. |++|+.+.++|+.++.
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence 99999999999999999999999889888885 899999999 9999999999999986
No 66
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.17 E-value=3.8e-05 Score=67.41 Aligned_cols=135 Identities=13% Similarity=0.021 Sum_probs=113.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-HH
Q 018400 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CS 88 (356)
Q Consensus 10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~ 88 (356)
+..|..+.+.+..+|+..-+..|.+-. ..+...-+..-+..++++.+|+-.-... ..-+++......+..++++ .+
T Consensus 146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~-~~~g~~g~a~gm~vAaviv~Pig~~~ag--~~l~~p~ll~laLgvavlSSal 222 (292)
T COG5006 146 DPVGVALALGAGACWALYIVLGQRAGR-AEHGTAGVAVGMLVAALIVLPIGAAQAG--PALFSPSLLPLALGVAVLSSAL 222 (292)
T ss_pred CHHHHHHHHHHhHHHHHHHHHcchhcc-cCCCchHHHHHHHHHHHHHhhhhhhhcc--hhhcChHHHHHHHHHHHHhccc
Confidence 356888999999999999999998864 4566677788889999999997643222 2223556777788888999 99
Q ss_pred HHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 89 SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 89 ~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
.+.+-..+++..+...-+++.++.|.+..+.++++++|+++.. ||+++...+.+.+-.+
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGST 281 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999 9999999888766544
No 67
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.15 E-value=4.6e-05 Score=71.30 Aligned_cols=140 Identities=11% Similarity=0.032 Sum_probs=108.5
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCC--cHHHHHHHHHHHHH
Q 018400 8 MRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQL--TFSILCSFFLLSVF 85 (356)
Q Consensus 8 ~~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~ 85 (356)
.+..+|-+.++++++++|...++-+...+ +.|+..+..+=.+.+.++..+.....+++....+ +.+....++.-++.
T Consensus 164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~-~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~ 242 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAVSNVLEEKLVK-KAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALC 242 (334)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHH
Confidence 45678999999999999999999999998 7888888777777777777766655665444333 33333322222222
Q ss_pred HHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400 86 GCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF 154 (356)
Q Consensus 86 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~ 154 (356)
....+.+.-..+++++++...+=.-++.+++.++.++++|++++|. .++|.++.++|.++...
T Consensus 243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~ 305 (334)
T PF06027_consen 243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNL 305 (334)
T ss_pred HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEc
Confidence 2666667777899999988877778899999999999999999999 99999999999998864
No 68
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.12 E-value=6.7e-07 Score=78.70 Aligned_cols=136 Identities=10% Similarity=0.122 Sum_probs=98.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhh
Q 018400 181 WILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGT 260 (356)
Q Consensus 181 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 260 (356)
.++|..+..++ .++...++..++.... ||++..-..+.+-.++..|..+..-.+. +-......| ++.=|+ ..
T Consensus 36 p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~v--~gp~g~R~~--LiLRg~-mG 107 (346)
T KOG4510|consen 36 PNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQPV--IGPEGKRKW--LILRGF-MG 107 (346)
T ss_pred CccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeeee--ecCCCcEEE--EEeehh-hh
Confidence 46788888888 8888888888887666 5777766665555544444433221111 111111122 223344 33
Q ss_pred HHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecc
Q 018400 261 GFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGK 324 (356)
Q Consensus 261 ~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~ 324 (356)
..+..+.++++++.+.+.++.+.+..|+++++++|++++|+.|....+|..+.+.|+.++.+..
T Consensus 108 ~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 108 FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 3667788899999999999999999999999999999999999999999999999999987643
No 69
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=98.11 E-value=2.3e-05 Score=62.08 Aligned_cols=69 Identities=13% Similarity=0.272 Sum_probs=59.4
Q ss_pred HHHhhHHHHhHHHhhhccCCCceeecc-chhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecc
Q 018400 256 AVIGTGFRVGLCTWCLSRTGPLYVSMF-KPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGK 324 (356)
Q Consensus 256 g~~~~~~~~~~~~~al~~~~~~~~s~~-~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~ 324 (356)
.+++.++++.++..++++.|.+.+=.+ ..+..+.+.+.+++++||++++.+++|..+|++|++......
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 344667899999999999999887554 568889999999999999999999999999999998885443
No 70
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.96 E-value=0.00013 Score=65.74 Aligned_cols=117 Identities=14% Similarity=0.085 Sum_probs=87.5
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHH
Q 018400 8 MRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGC 87 (356)
Q Consensus 8 ~~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 87 (356)
.+..++++.+++.++.+.....+.|.. +.++....+=. .++.++-..+.....+ .+ ...|..++-++.|++..
T Consensus 134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPq-aiGm~i~a~i~~~~~~--~~-~~~k~~~~nil~G~~w~ 206 (269)
T PF06800_consen 134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQ-AIGMLIGAFIFNLFSK--KP-FFEKKSWKNILTGLIWG 206 (269)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHH-HHHHHHHHHHHhhccc--cc-ccccchHHhhHHHHHHH
Confidence 456789999999999998888888885 56776665533 3333332222222222 11 12244556677888889
Q ss_pred HHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhcccccc
Q 018400 88 SSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWE 131 (356)
Q Consensus 88 ~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~ 131 (356)
+.+.+++.+.+..+.+.+-.+.++..++..+-+.+++||+-+++
T Consensus 207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k 250 (269)
T PF06800_consen 207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK 250 (269)
T ss_pred HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence 99999999999999999999999999999999999999999988
No 71
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.88 E-value=5.6e-05 Score=70.00 Aligned_cols=120 Identities=13% Similarity=0.117 Sum_probs=90.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHh
Q 018400 180 SWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIG 259 (356)
Q Consensus 180 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 259 (356)
++..|.++++.++++.+....++||...+.+ .... .. +....+...+..| +.|+..
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~-~~~~------------------~~-~~~~~~~l~~~~W----~~G~~~ 59 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLP-RGSL------------------RA-GSGGRSYLRRPLW----WIGLLL 59 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccc------------------cc-cchhhHHHhhHHH----HHHHHH
Confidence 5678999999999999999999999877754 1000 00 0000000011122 234444
Q ss_pred hHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400 260 TGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG 323 (356)
Q Consensus 260 ~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~ 323 (356)
..++..+...++...|++.++++..+..++..+++..+++|+++...+.|+.+++.|..+....
T Consensus 60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~ 123 (300)
T PF05653_consen 60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF 123 (300)
T ss_pred HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence 5567778889999999999999999999999999999999999999999999999998877644
No 72
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.85 E-value=0.00022 Score=66.45 Aligned_cols=130 Identities=17% Similarity=0.160 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHhhc-h--hHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHHhHHHhhh
Q 018400 195 NSAWFILQALILRKFA-A--VLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCL 271 (356)
Q Consensus 195 ~a~~~v~~~~~~~~~~-~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al 271 (356)
+..+.+++++..++.. . +..+++.+.....+...+.......+. . ....+.-.+..++ ...++..+-+.++
T Consensus 12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~-~~~~~~~~~~~al 85 (303)
T PF08449_consen 12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK--S---RKIPLKKYAILSF-LFFLASVLSNAAL 85 (303)
T ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC--C---CcChHHHHHHHHH-HHHHHHHHHHHHH
Confidence 3445667777766643 3 678888888888887776665433111 1 1112333344454 5668888999999
Q ss_pred ccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecccccccc
Q 018400 272 SRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEEKT 330 (356)
Q Consensus 272 ~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~~~ 330 (356)
++.+.....+.....|+...+++++++|++.+..++.+..++.+|+.+....+.++++.
T Consensus 86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~ 144 (303)
T PF08449_consen 86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSS 144 (303)
T ss_pred HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccc
Confidence 99999999999999999999999999999999999999999999999988765544443
No 73
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.81 E-value=0.00018 Score=56.18 Aligned_cols=67 Identities=19% Similarity=0.172 Sum_probs=58.0
Q ss_pred HHhhHHHHhHHHhhhccCCCceeecc-chhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400 257 VIGTGFRVGLCTWCLSRTGPLYVSMF-KPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG 323 (356)
Q Consensus 257 ~~~~~~~~~~~~~al~~~~~~~~s~~-~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~ 323 (356)
+++.++++.++..++++.|...+=.. ..+..+.+.+.++++|||++++.+++|..+|++|+++....
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 44667889999999999998887444 66788889999999999999999999999999999998543
No 74
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.71 E-value=0.00035 Score=54.36 Aligned_cols=63 Identities=10% Similarity=0.182 Sum_probs=55.8
Q ss_pred hhHHHHhHHHhhhccCCCcee-eccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhe
Q 018400 259 GTGFRVGLCTWCLSRTGPLYV-SMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM 321 (356)
Q Consensus 259 ~~~~~~~~~~~al~~~~~~~~-s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~ 321 (356)
+..+++.+...++|+.|...+ +.......+.+.+.+++++||++++.+++|..+|+.|+....
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 567889999999999998876 566677888899999999999999999999999999998763
No 75
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.67 E-value=0.00033 Score=54.18 Aligned_cols=66 Identities=17% Similarity=0.307 Sum_probs=57.6
Q ss_pred HHhhHHHHhHHHhhhccCCCcee-eccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhee
Q 018400 257 VIGTGFRVGLCTWCLSRTGPLYV-SMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMW 322 (356)
Q Consensus 257 ~~~~~~~~~~~~~al~~~~~~~~-s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~ 322 (356)
+++.+.++.+...++|+.|...+ +....+..+.+.+.+++++||++++.+++|..++++|+.....
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 33567889999999999998776 6666788899999999999999999999999999999988743
No 76
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.61 E-value=0.00096 Score=51.92 Aligned_cols=60 Identities=13% Similarity=0.061 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhhccChhhHhHh-hhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhh
Q 018400 87 CSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVV 152 (356)
Q Consensus 87 ~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv 152 (356)
..+..+.-.++++.|.+.+-.+ ...--+.+.+.+++++||++++. |++|+.+.+.|++.+
T Consensus 46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l 106 (109)
T PRK10650 46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence 7888888999999999988555 56888999999999999999999 999999999999886
No 77
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.61 E-value=0.00034 Score=53.61 Aligned_cols=65 Identities=23% Similarity=0.401 Sum_probs=57.3
Q ss_pred hhHHHHhHHHhhhccCCCcee-eccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400 259 GTGFRVGLCTWCLSRTGPLYV-SMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG 323 (356)
Q Consensus 259 ~~~~~~~~~~~al~~~~~~~~-s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~ 323 (356)
+..++|.+...++|+.|...+ +.......+.+.+.++++|||+.+..+++|..++++|+......
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 556889999999999998776 67777888899999999999999999999999999999887543
No 78
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.58 E-value=0.0016 Score=53.11 Aligned_cols=129 Identities=10% Similarity=0.079 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Q 018400 15 VGMVIVLLAQVSNMEVIKAAMSKGI-NKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFS 93 (356)
Q Consensus 15 ~~~ll~~~~~g~~~~~~k~~~~~~~-~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 93 (356)
+..+++..+-+....+.-..-+ .. +|+.-.++-+..+.+++..+..+.+++..+..+..+|+. .+.|+++...-.+.
T Consensus 4 lla~~aG~~i~~q~~~N~~L~~-~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~-~lGG~lG~~~V~~~ 81 (138)
T PF04657_consen 4 LLALLAGALIALQAAFNGQLGK-ALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWA-YLGGLLGVFFVLSN 81 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHH-hccHHHHHHHHHHH
Confidence 4455555555555555555544 34 499999999999999888877766654333333334444 44889998888888
Q ss_pred HHHhhccChhhHhHhhhh-hHHHHHHHHHH----HhhccccccccccccchhhHHHHhhhhhh
Q 018400 94 FVGIQYSSPTLSTAMLNL-IPAFTFVLAII----FRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (356)
Q Consensus 94 ~~al~~~~~~~a~~l~~~-~Pv~~~lls~~----~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l 151 (356)
.......+++.+..+.-+ +-+...++..+ .-|+++++. |.+|+++.++|+.+
T Consensus 82 ~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 82 IILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL 138 (138)
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence 999999999988877664 66666666664 457899999 99999999999864
No 79
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.43 E-value=0.00068 Score=52.88 Aligned_cols=110 Identities=17% Similarity=0.149 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018400 18 VIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGI 97 (356)
Q Consensus 18 ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al 97 (356)
++.+++||.+.++.|.+.. +.++..-.. |..-... .+ + +.+.+ ..-=.++-.+...|++.+
T Consensus 2 l~Vg~~WG~Tnpfik~g~~-~~~~~~~~~-~~~~~~~-~L----l-----------~n~~y-~ipf~lNq~GSv~f~~~L 62 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSS-GLEKVKASL-QLLQEIK-FL----L-----------LNPKY-IIPFLLNQSGSVLFFLLL 62 (113)
T ss_pred eeehHHhcCchHHHHHHHh-hcCCccchH-HHHHHHH-HH----H-----------HhHHH-HHHHHHHHHHHHHHHHHH
Confidence 3567899999999999987 555444331 3211111 11 0 11222 222223377788899999
Q ss_pred hccChhhHhHhh-hhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhh
Q 018400 98 QYSSPTLSTAML-NLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVV 152 (356)
Q Consensus 98 ~~~~~~~a~~l~-~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv 152 (356)
...+.+.+..+. +++=+||.+.++++.+|..+++ .++|+.+.+.|+.++
T Consensus 63 ~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 63 GSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC 112 (113)
T ss_pred hcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence 999999999996 6888999999988888888888 899999999998875
No 80
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.39 E-value=0.0014 Score=51.94 Aligned_cols=65 Identities=15% Similarity=0.160 Sum_probs=58.1
Q ss_pred HHHH-HHHHHHHHHHhhccChhhHhHh-hhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 83 SVFG-CSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 83 g~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
.+.. +.+..++..++++.|.+.+-.+ ...--+.+.++++++++|++++. +++|+.+.++|++.+-
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhh
Confidence 3444 8899999999999999999666 46899999999999999999999 9999999999998885
No 81
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.38 E-value=0.0028 Score=51.77 Aligned_cols=132 Identities=15% Similarity=0.122 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHH
Q 018400 184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFR 263 (356)
Q Consensus 184 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 263 (356)
..++++.++.+-++......++.++..++..-++..+..+.+....+.++..++ ..+...+..|+..+ -|+ .....
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~-lG~~~ 77 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGL-LGVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHH-HHHHH
Confidence 357788899999999999999988876699999999999999998888766543 23222222343333 444 55566
Q ss_pred HhHHHhhhccCCCceeeccc-hhHHHHHHHHHHH----HhcCcccchhhhhHHHHHHhhhh
Q 018400 264 VGLCTWCLSRTGPLYVSMFK-PLAIVFSIVMDVV----IVGDAFCLGSLIGAMIIVAGFYA 319 (356)
Q Consensus 264 ~~~~~~al~~~~~~~~s~~~-~~~pv~a~~~~~~----~~ge~~~~~~~iG~~li~~g~~l 319 (356)
..+..+..++.+++....+. .-+.+.+.++|.+ .-++++++.+++|..++++|+++
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 77788889999988776554 4466677777775 23467899999999999999864
No 82
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=97.32 E-value=0.079 Score=49.24 Aligned_cols=299 Identities=14% Similarity=0.083 Sum_probs=174.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHH--HHHhccCC---CCCCcHHHHHHHHHHHH
Q 018400 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFC--SFLFHRSE---RPQLTFSILCSFFLLSV 84 (356)
Q Consensus 10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~--~~~~~~~~---~~~~~~~~~~~~~~~g~ 84 (356)
-..|+++-.++.++-|...+-.|..-+=....+.++ ..+-.-+..|. +++.-+.. ....+...+....+.|+
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkvk~WsWEs~Wlv---~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKVKGWSWESYWLV---QGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhcCCccHHHHHHH---HHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 567899999999999999999998843223344433 12222222232 22222211 12334466777788888
Q ss_pred HHHHHHHHHHHHhhccChhhHhHh-hhhhHHHHHHHHHHHhhccc-cccccccccchhhHHHHhhhhhhheeccCCCCcc
Q 018400 85 FGCSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKL-NWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIG 162 (356)
Q Consensus 85 ~~~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l~e~~-~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~ 162 (356)
+-+++...|=.+++|++.+...-+ ..+..++-.++-.++.++-- -..+..++..++|++++++|++++.. .|..-
T Consensus 82 lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~-AG~~K-- 158 (344)
T PF06379_consen 82 LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGK-AGSMK-- 158 (344)
T ss_pred HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhH-HHHhh--
Confidence 889999999999999999877444 55777777777666644210 01122455589999999999999863 22110
Q ss_pred CCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH--HHhh-----chhH----HHHHHHHHHHHHHHHHHH
Q 018400 163 ELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALI--LRKF-----AAVL----IIMFYLFFFNTILSTAFA 231 (356)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~--~~~~-----~~~~----~~~~~~~~~~~v~~~~~~ 231 (356)
|... ..+.++.+..+|.+.++.+++.-|..++-...- .++. .|+. ......+.-+.+..+...
T Consensus 159 ----e~~~--~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc 232 (344)
T PF06379_consen 159 ----EKEL--GEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYC 232 (344)
T ss_pred ----hhhh--ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHH
Confidence 0000 011234466789999999999888877655311 1110 0111 122333344444444444
Q ss_pred HHHhc---CCC---cccccc---hhhHHHHHHHHHHhhHHHHhHHHhhhccCCCc----eeeccchhHHHHHHHHHHHHh
Q 018400 232 LIVVS---EPS---DWKLGL---DIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPL----YVSMFKPLAIVFSIVMDVVIV 298 (356)
Q Consensus 232 ~~~~~---~~~---~~~~~~---~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~----~~s~~~~~~pv~a~~~~~~~~ 298 (356)
++... +.. +..... ......-+..|+ .=...+++|..+-.+.+.. --.+.+.+..+++-+++.+ +
T Consensus 233 ~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-l 310 (344)
T PF06379_consen 233 LILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-L 310 (344)
T ss_pred HHHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-H
Confidence 43322 211 111111 122333334454 4456777788887777754 3356777888888999987 5
Q ss_pred cCc------ccchhhhhHHHHHHhhhhhee
Q 018400 299 GDA------FCLGSLIGAMIIVAGFYAVMW 322 (356)
Q Consensus 299 ge~------~~~~~~iG~~li~~g~~l~~~ 322 (356)
+|. .-...++|+.+++.++.++-+
T Consensus 311 kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 311 KEWKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred HHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 773 224457888888888776543
No 83
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.29 E-value=0.0012 Score=50.02 Aligned_cols=56 Identities=20% Similarity=0.351 Sum_probs=35.3
Q ss_pred HhhHHHHhHHHhhhccCCCcee-eccchhHHHHHHHHHHHHhcCcccchhhhhHHHH
Q 018400 258 IGTGFRVGLCTWCLSRTGPLYV-SMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMII 313 (356)
Q Consensus 258 ~~~~~~~~~~~~al~~~~~~~~-s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li 313 (356)
.+.++++.++..++|+.|.+.+ .....+..+...+.+++++||++++.+++|..+|
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3667889999999999999998 4556789999999999999999999999999875
No 84
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.26 E-value=0.0036 Score=48.43 Aligned_cols=61 Identities=10% Similarity=-0.026 Sum_probs=55.2
Q ss_pred HHHHHHHHHHhhccChhhHhHh-hhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 87 CSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 87 ~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
..+..+...+++..|.+.+-.+ ...-.+.+.+.+++++||++++. |++|+.+.++|++.+-
T Consensus 40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence 7888889999999999988555 55889999999999999999999 9999999999999873
No 85
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.23 E-value=0.0023 Score=49.16 Aligned_cols=61 Identities=13% Similarity=0.031 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhhccChhhHh-HhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 87 CSSQIFSFVGIQYSSPTLST-AMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 87 ~~~~~~~~~al~~~~~~~a~-~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
..++.++-.++++.|.+.+- +....-.+.+.+.+++++||+.+.. |++++.+.++|++.+-
T Consensus 41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence 78888899999999999884 4466899999999999999999999 9999999999999874
No 86
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.23 E-value=0.0035 Score=48.96 Aligned_cols=64 Identities=16% Similarity=0.230 Sum_probs=57.0
Q ss_pred HHH-HHHHHHHHHHhhccChhhHhHh-hhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 84 VFG-CSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 84 ~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
+.+ .++..++..+++..|.+.+-.+ ...--+.+.+++++++||++++. +++|+.+.++|++.+-
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence 444 7888888999999999999666 56888999999999999999999 9999999999999985
No 87
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.19 E-value=0.0059 Score=50.02 Aligned_cols=138 Identities=14% Similarity=0.148 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhH
Q 018400 182 ILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTG 261 (356)
Q Consensus 182 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 261 (356)
.+..++.++++.+-.+..-...++.+..++|..-.+..+.++++.+..+.++.+ +..++....+..|+.. .-|+++.
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~-~~~~~a~~~~~pwW~~-~GG~lGa- 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQ-GHPGLAAVASAPWWAW-IGGLLGA- 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhc-CCCchhhccCCchHHH-Hccchhh-
Confidence 456788899999999999999999888766888889999999999988888743 3333332222233332 2333222
Q ss_pred HHHhHHHhhhccCCCce-eeccchhHHHHHHHHHHHHhc----CcccchhhhhHHHHHHhhhhhee
Q 018400 262 FRVGLCTWCLSRTGPLY-VSMFKPLAIVFSIVMDVVIVG----DAFCLGSLIGAMIIVAGFYAVMW 322 (356)
Q Consensus 262 ~~~~~~~~al~~~~~~~-~s~~~~~~pv~a~~~~~~~~g----e~~~~~~~iG~~li~~g~~l~~~ 322 (356)
.-...-.....+.+++. ......-+.+.+.++|-+=+. .+++...++|..++++|+++..+
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 22233334555655543 445555667777777766544 57899999999999999666544
No 88
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.00 E-value=0.002 Score=58.00 Aligned_cols=77 Identities=17% Similarity=0.233 Sum_probs=65.5
Q ss_pred HHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecccc
Q 018400 249 LVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSK 326 (356)
Q Consensus 249 ~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~ 326 (356)
......-++ ...+...+.+.++++.+|+...++..+..+++.++++++++.+++..||++..++++|+.+.......
T Consensus 17 ~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 17 TLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 344444454 46677788889999999999999999999999999999999999999999999999999987655443
No 89
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.72 E-value=0.018 Score=43.59 Aligned_cols=52 Identities=19% Similarity=0.078 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhhccChhhHhHh-hhhhHHHHHHHHHHHhhccccccccccccchhhHHH
Q 018400 87 CSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFA 144 (356)
Q Consensus 87 ~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l 144 (356)
+.+..++..++++.|.+.+-.+ ..+..+.+.+.+.+++||++|+. |+.|+.+
T Consensus 40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l 92 (93)
T PF00893_consen 40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence 7888999999999999999555 56999999999999999999999 9999876
No 90
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=96.52 E-value=0.015 Score=54.16 Aligned_cols=140 Identities=10% Similarity=0.121 Sum_probs=107.4
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHhCC---CChhHHHHHHHHHHHHHHHHHHHHhcc---CCCCCCcHHHHHHHHHH
Q 018400 9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKG---INKYVIIVYSDALSSLFFLFCSFLFHR---SERPQLTFSILCSFFLL 82 (356)
Q Consensus 9 ~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~---~~~~~~~~~r~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~ 82 (356)
+...|-++.+++++++|...++.|.-.+++ +|.-.+-.+-.+...++++|..++.+. +...--+..+....+..
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 346789999999999999999999987633 444444444445566777765554332 22222233556667778
Q ss_pred HHHH-HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400 83 SVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF 154 (356)
Q Consensus 83 g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~ 154 (356)
++++ .++.++|.+|.-.+++-.+++-.+++.-..++.-.++-+.++++. .++|.+..++|-+.+..
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNI 390 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheec
Confidence 8888 999999999999999999999988777777788888889999999 99999999999888864
No 91
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.45 E-value=0.0097 Score=55.23 Aligned_cols=137 Identities=15% Similarity=0.169 Sum_probs=107.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHh---CCCChhHHHHHHHHHHHHHHH-HHHHHhccCCC-----CCCcHHHHHHHH
Q 018400 10 AALPSVGMVIVLLAQVSNMEVIKAAMS---KGINKYVIIVYSDALSSLFFL-FCSFLFHRSER-----PQLTFSILCSFF 80 (356)
Q Consensus 10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~---~~~~~~~~~~~r~~~~~~~l~-~~~~~~~~~~~-----~~~~~~~~~~~~ 80 (356)
...|.+....+.+..+.-.++.|..+. ..++++....+-.-++.+.++ |+......... ...+.. .....
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence 467999999999999999999999994 248888887777777777777 76544333221 122333 33334
Q ss_pred HHHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 81 LLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 81 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
+..++....|...|..+..++|-.-++....--+++...++++++++.++. +..|.+++++|+++-.
T Consensus 240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHH
Confidence 444666888899999999999999999988888888899999999999999 9999999999999875
No 92
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.44 E-value=0.0016 Score=57.20 Aligned_cols=133 Identities=11% Similarity=-0.012 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHH
Q 018400 184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFR 263 (356)
Q Consensus 184 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 263 (356)
+.+.+++=++.|+.--....|. .. +|...+.-..+-+.++.+++.++ ..+...+ ..+..-+..|. .=.++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~--GG-~p~qQ~lGtT~GALifaiiv~~~-~~p~~T~-----~~~iv~~isG~-~Ws~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF--GG-KPYQQTLGTTLGALIFAIIVFLF-VSPELTL-----TIFIVGFISGA-FWSFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec--CC-ChhHhhhhccHHHHHHHHHHhee-ecCccch-----hhHHHHHHhhh-Hhhhh
Confidence 4577888888998766665553 22 36666666666666666666654 2222111 13334444555 44578
Q ss_pred HhHHHhhhccCCCceeeccc-hhHHHHHHHHHHHHhcCcccchhh----hhHHHHHHhhhhheecccc
Q 018400 264 VGLCTWCLSRTGPLYVSMFK-PLAIVFSIVMDVVIVGDAFCLGSL----IGAMIIVAGFYAVMWGKSK 326 (356)
Q Consensus 264 ~~~~~~al~~~~~~~~s~~~-~~~pv~a~~~~~~~~ge~~~~~~~----iG~~li~~g~~l~~~~~~~ 326 (356)
+..++++.+..+.+++.++. ..+-+-+.+++++.|+|..+..+. ++.++++.|+++..+.++.
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~ 140 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN 140 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc
Confidence 99999999999999998875 477888899999999999987765 3457788898888766553
No 93
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.42 E-value=0.14 Score=48.21 Aligned_cols=145 Identities=13% Similarity=0.029 Sum_probs=88.4
Q ss_pred HHhhhHHHHHHHHHHHHHHHH-------HHHHHHHhCCCChhHHHHHHHH---HHHHHHHH-HHHHh--ccCCC-----C
Q 018400 8 MRAALPSVGMVIVLLAQVSNM-------EVIKAAMSKGINKYVIIVYSDA---LSSLFFLF-CSFLF--HRSER-----P 69 (356)
Q Consensus 8 ~~~~~~~~~~ll~~~~~g~~~-------~~~k~~~~~~~~~~~~~~~r~~---~~~~~l~~-~~~~~--~~~~~-----~ 69 (356)
.+..||++.++++.+..+... +..+.+.+.+.++.....-... ++..+.-+ ++.++ +++.. +
T Consensus 170 ~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~ 249 (345)
T PRK13499 170 FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADF 249 (345)
T ss_pred cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhc
Confidence 355789999999999888888 5555544446677665555554 44443332 22221 21121 1
Q ss_pred CCcHHHHHHH----HHHHHHHHHHHHHHHHHhhccChhhHhH---hh-hhhHHHHHHHHHHHhhccccccccccccchhh
Q 018400 70 QLTFSILCSF----FLLSVFGCSSQIFSFVGIQYSSPTLSTA---ML-NLIPAFTFVLAIIFRLEKLNWENKSSQAKSLG 141 (356)
Q Consensus 70 ~~~~~~~~~~----~~~g~~~~~~~~~~~~al~~~~~~~a~~---l~-~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g 141 (356)
+-+++.+.+- .+.|++-++.+.++..|-+..+.+.+.. +. ++.-++..+-+. ++||+-+-.+|+-.--++|
T Consensus 250 ~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G 328 (345)
T PRK13499 250 SLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLG 328 (345)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHH
Confidence 1122233444 6666666888999999999887666655 65 444455555555 6999988322233335788
Q ss_pred HHHHhhhhhhhe
Q 018400 142 TFASIGGAFVVT 153 (356)
Q Consensus 142 ~~l~~~Gv~lv~ 153 (356)
+++.++|+.++.
T Consensus 329 ~vliI~g~~lig 340 (345)
T PRK13499 329 CVVIILAANIVG 340 (345)
T ss_pred HHHHHHHHHHHh
Confidence 888888888875
No 94
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.25 E-value=0.014 Score=45.58 Aligned_cols=109 Identities=10% Similarity=0.038 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHHhHHHh
Q 018400 190 AEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTW 269 (356)
Q Consensus 190 ~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 269 (356)
+-+++|+..+.+.||..+..+ +..-.. +....... .+. .|-.. ..+.....+-.+|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~-~~~~~~-~~~~~~~~-----Ll~-------------n~~y~--ipf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLE-KVKASL-QLLQEIKF-----LLL-------------NPKYI--IPFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcC-CccchH-HHHHHHHH-----HHH-------------hHHHH--HHHHHHHHHHHHHHH
Confidence 346789999999999887754 222211 11111111 111 11111 123334456677888
Q ss_pred hhccCCCceeeccc-hhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhh
Q 018400 270 CLSRTGPLYVSMFK-PLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAV 320 (356)
Q Consensus 270 al~~~~~~~~s~~~-~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~ 320 (356)
.+++.+.+.+.++. .+.-+++++.++++.+|..+...++|+.++++|+.+.
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 99999999999994 9999999999998777777888999999999998763
No 95
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.12 E-value=0.11 Score=42.62 Aligned_cols=132 Identities=8% Similarity=0.009 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 018400 14 SVGMVIVLLAQVSNMEVIKAAMSKGI-NKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIF 92 (356)
Q Consensus 14 ~~~~ll~~~~~g~~~~~~k~~~~~~~-~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 92 (356)
++..+++..+-.....+.-...+ +. +|+.-.+..+..+.+++..+.++..++......++.-++.+..|++|..+-..
T Consensus 7 ll~~i~aG~~l~~Q~~iN~qL~~-~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~ 85 (150)
T COG3238 7 LLFAILAGALLPLQAAINGRLAR-YLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVTS 85 (150)
T ss_pred HHHHHHHhhhhhhHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhhh
Confidence 34444444444444444433333 33 58899999999988888887776433222222234344556667888666666
Q ss_pred HHHHhhccChhhHhHh-hhhhHHHHHHHHHHHh----hccccccccccccchhhHHHHhhhhhhh
Q 018400 93 SFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFR----LEKLNWENKSSQAKSLGTFASIGGAFVV 152 (356)
Q Consensus 93 ~~~al~~~~~~~a~~l-~~~~Pv~~~lls~~~l----~e~~~~~~~~~~~~~~g~~l~~~Gv~lv 152 (356)
........+++....+ ..-+-+...++..+=+ +.++++. +++|+++.++|+.++
T Consensus 86 s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~ 144 (150)
T COG3238 86 SILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLA 144 (150)
T ss_pred hHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHh
Confidence 6667777776665554 4445555555554433 5778888 999999999995554
No 96
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.09 E-value=0.042 Score=48.58 Aligned_cols=64 Identities=11% Similarity=0.108 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhh
Q 018400 82 LSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (356)
Q Consensus 82 ~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l 151 (356)
..+.......|..+.++|.++..-+....+.++++.+++.++++|+++.. ++.|..+.+.|+.+
T Consensus 158 ~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~l 221 (222)
T TIGR00803 158 VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeEe
Confidence 33444777788899999999999999999999999999999999999999 99999999888653
No 97
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=95.89 E-value=0.19 Score=45.28 Aligned_cols=186 Identities=11% Similarity=0.004 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 018400 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIF 92 (356)
Q Consensus 13 ~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 92 (356)
|+++.+++.+++|++++-.|..- .-|++.+-++-.....+.-+.+..+.+ .|++ ....++.|.+.+.++.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~--~gDg~~fQw~~~~~i~~~g~~v~~~~~---~p~f----~p~amlgG~lW~~gN~~ 71 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD--TGDGFFFQWVMCSGIFLVGLVVNLILG---FPPF----YPWAMLGGALWATGNIL 71 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc--CCCcHHHHHHHHHHHHHHHHHHHHhcC---CCcc----eeHHHhhhhhhhcCcee
Confidence 57888999999999999999874 357776666555444443333333332 2332 33556667777999999
Q ss_pred HHHHhhccChhhHhHhhhhhHHHHHHH-HHH-HhhccccccccccccchhhHHHHhhhhhhheeccCCC-CccC------
Q 018400 93 SFVGIQYSSPTLSTAMLNLIPAFTFVL-AII-FRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPP-LIGE------ 163 (356)
Q Consensus 93 ~~~al~~~~~~~a~~l~~~~Pv~~~ll-s~~-~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~-~~~~------ 163 (356)
..-.++..+.+....+-++.-+.+.-. +++ +++++.... +...-..+|++++++|..+..+-+.+. ....
T Consensus 72 ~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~ 150 (254)
T PF07857_consen 72 VVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETP 150 (254)
T ss_pred ehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCccccccccc
Confidence 999999999999988877655444433 333 333322211 111226889999999988886533322 0000
Q ss_pred -C-CCCC---CC---CccCCC-----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018400 164 -L-SHSG---SP---RRLLLS-----PQLSWILGGFFLAAEAFMNSAWFILQALILRK 208 (356)
Q Consensus 164 -~-~~~~---~~---~~~~~~-----~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~ 208 (356)
. ++.. ++ ++.++. .......|..+++.+++.|+...+=.....++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 151 LSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred cccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 0 1000 11 001111 11246778888888888888766555544333
No 98
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.77 E-value=0.0046 Score=56.49 Aligned_cols=129 Identities=12% Similarity=0.160 Sum_probs=96.9
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHH
Q 018400 178 QLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAV 257 (356)
Q Consensus 178 ~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 257 (356)
...+..|.++++.+.+..+...++.||..++.. . ... ..+ ..+.... .+ ...+.|+
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~-----------------~~~-ra~-~gg~~yl--~~--~~Ww~G~ 71 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A-----------------SGL-RAG-EGGYGYL--KE--PLWWAGM 71 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHHh-h-----------------hcc-ccc-CCCcchh--hh--HHHHHHH
Confidence 345678999999999999999999998877753 1 000 111 1111111 11 2224677
Q ss_pred HhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecccccccc
Q 018400 258 IGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEEKT 330 (356)
Q Consensus 258 ~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~~~ 330 (356)
+..+++-...+.+....|++.++++..+..+..++++..+++|+++..-.+||++.++|.........++++.
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i 144 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEI 144 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccc
Confidence 7777888888888999999999999999999999999999999999999999999999988876654444433
No 99
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=95.73 E-value=0.37 Score=44.99 Aligned_cols=140 Identities=14% Similarity=0.074 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc---hhHHHHHHHHHHHHHHHHHHHHHHhcC----C-Cccc---ccchhhHHH
Q 018400 183 LGGFFLAAEAFMNSAWFILQALILRKFA---AVLIIMFYLFFFNTILSTAFALIVVSE----P-SDWK---LGLDIGLVA 251 (356)
Q Consensus 183 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~----~-~~~~---~~~~~~~~~ 251 (356)
.-.+..+...+-++......|...++.. .+.+..+..-++-.+++....+..... . ...+ ...+.+...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 4456666677777777777776544431 267777777888887777776644311 0 0111 111111222
Q ss_pred HHHHHHHhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400 252 VLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG 323 (356)
Q Consensus 252 l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~ 323 (356)
+..-++ ...+-..+++.++++.++++..+...+....+.++..++++++.+..||...++..+|+.+....
T Consensus 95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~ 165 (345)
T KOG2234|consen 95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP 165 (345)
T ss_pred HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 222222 33444458889999999999999999999999999999999999999999999999999998743
No 100
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.55 E-value=0.18 Score=45.97 Aligned_cols=139 Identities=16% Similarity=0.178 Sum_probs=109.7
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHHhccCCCC-----CCcHHHHHHHHH
Q 018400 8 MRAALPSVGMVIVLLAQVSNMEVIKAAMSK-GINKYVIIVYSDALSSLFFLFCSFLFHRSERP-----QLTFSILCSFFL 81 (356)
Q Consensus 8 ~~~~~~~~~~ll~~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~ 81 (356)
.+...|+.++....++=|++.......... .++++.+++.-.+..++.-... .+.....++ +.++..++.+++
T Consensus 168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~~~~Di~l 246 (327)
T KOG1581|consen 168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTY-LILQGHLLPAVSFIKEHPDVAFDILL 246 (327)
T ss_pred CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHh-hhcCCCCchHHHHHHcChhHHHHHHH
Confidence 345678887777777778888877777653 4889999888888877665543 222222222 225567888899
Q ss_pred HHHHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 82 LSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 82 ~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
...++..+|.+.|.-++.-++-.-+.+..+==++..+++.+.++.++++. ||+|+.+.+.|+.+=.
T Consensus 247 ~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~ 312 (327)
T KOG1581|consen 247 YSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEI 312 (327)
T ss_pred HHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHH
Confidence 99999999999999999998888889999999999999999999999999 9999999888887654
No 101
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=95.21 E-value=0.11 Score=46.82 Aligned_cols=127 Identities=13% Similarity=0.080 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCC-Ccccccchhh-----HHHHHHHHH
Q 018400 184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEP-SDWKLGLDIG-----LVAVLYSAV 257 (356)
Q Consensus 184 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~-----~~~l~~~g~ 257 (356)
|.+.+++|+++|+-..+=.||.... |++..-.++.....+....+.++.+.+. .+|......- ...+-..--
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p~f~p~amlgG~lW~~gN~~~vpii~~ 78 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFPPFYPWAMLGGALWATGNILVVPIIKT 78 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCCcceeHHHhhhhhhhcCceeehhHhhh
Confidence 4567788899999888888876433 6877766666666666665555443321 1111100000 001111111
Q ss_pred HhhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHH-HhcCcc-----cchhhhhHHHHHHhhhhheeccccc
Q 018400 258 IGTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVV-IVGDAF-----CLGSLIGAMIIVAGFYAVMWGKSKE 327 (356)
Q Consensus 258 ~~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~-~~ge~~-----~~~~~iG~~li~~g~~l~~~~~~~~ 327 (356)
++-++++.+|. ..+.+.+-..+-+ +||++. +..-++|.+++++|..++...|.+.
T Consensus 79 iGLglg~liW~---------------s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 79 IGLGLGMLIWG---------------SVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hhhHHHHHHHH---------------HHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 12234444442 2333444444432 455432 4668899999999999888766554
No 102
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.03 E-value=0.27 Score=45.24 Aligned_cols=138 Identities=17% Similarity=0.234 Sum_probs=107.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHHhccCC-----CCCC-cHHHHHHHHHHH
Q 018400 11 ALPSVGMVIVLLAQVSNMEVIKAAMSK-GINKYVIIVYSDALSSLFFLFCSFLFHRSE-----RPQL-TFSILCSFFLLS 83 (356)
Q Consensus 11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~-~~~~~~~~~~~g 83 (356)
..||.++....+.-+...+..|+..+. +.+-+.++++..+.+.+.+....++.+... .+.. +...+....+.+
T Consensus 156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc 235 (314)
T KOG1444|consen 156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC 235 (314)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence 347888888888888888999988763 477888999999998888777665544311 1111 224466777788
Q ss_pred HHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400 84 VFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF 154 (356)
Q Consensus 84 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~ 154 (356)
+++..-+++.++..+..++...++.....-..+.+...++.+++.++. ...|+.++++|.++-.+
T Consensus 236 v~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 236 VMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYSY 300 (314)
T ss_pred HHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHhh
Confidence 888888999999999999988888885666666666677888999999 99999999999988753
No 103
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=94.77 E-value=0.15 Score=44.34 Aligned_cols=136 Identities=14% Similarity=0.152 Sum_probs=105.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHHhccCCC----CCCcHHHHHHHHHHHHHH
Q 018400 12 LPSVGMVIVLLAQVSNMEVIKAAMSK-GINKYVIIVYSDALSSLFFLFCSFLFHRSER----PQLTFSILCSFFLLSVFG 86 (356)
Q Consensus 12 ~~~~~~ll~~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~ 86 (356)
.||+++....+--+..-...|...+. ...-+..+++..+++..++..+.++.+.+.. ..++...+...+..|++.
T Consensus 155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s 234 (309)
T COG5070 155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS 234 (309)
T ss_pred CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH
Confidence 46666666666555555556655431 4567788999999999999888777665322 234555667778888888
Q ss_pred HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 87 CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 87 ~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
..-.+|.-|.++-++.+.-+.+-.+.-.-..+.+.++++|+.++. .+.++.++++..++-.
T Consensus 235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYa 295 (309)
T COG5070 235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYA 295 (309)
T ss_pred hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHH
Confidence 777788899999999999999999888888899999999999999 9999999988777654
No 104
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.30 E-value=0.27 Score=43.18 Aligned_cols=134 Identities=13% Similarity=0.142 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC-CChhHHHHHHHHHHHHHHHHHHHHhccCCCC-----CCcHHHHHHHHHHHHHH
Q 018400 13 PSVGMVIVLLAQVSNMEVIKAAMSKG-INKYVIIVYSDALSSLFFLFCSFLFHRSERP-----QLTFSILCSFFLLSVFG 86 (356)
Q Consensus 13 ~~~~~ll~~~~~g~~~~~~k~~~~~~-~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~ 86 (356)
|-+++++....=|.+.......-.++ -+.-.+.++-.+.+.+.+..-..+.+ +.|. ......++.+.+.++.+
T Consensus 173 GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTG-ElweF~yF~~RhP~~~~~l~l~ai~s 251 (337)
T KOG1580|consen 173 GELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTG-ELWEFFYFVQRHPYVFWDLTLLAIAS 251 (337)
T ss_pred HHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehh-hHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 44555555555555555544333211 22334444555555544433222221 1110 11225677888889999
Q ss_pred HHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 87 CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 87 ~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
++++.+.|.-+.+-+|-.-+++..+--+||.+.+.++++.+++.+ ||+|..+.+.|...=.
T Consensus 252 ~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 252 CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADV 312 (337)
T ss_pred HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHh
Confidence 999999999999999999999999999999999999999999999 9999999988866543
No 105
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=93.34 E-value=0.049 Score=46.42 Aligned_cols=64 Identities=14% Similarity=0.267 Sum_probs=58.6
Q ss_pred HHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400 262 FRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS 325 (356)
Q Consensus 262 ~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~ 325 (356)
.+.++|..++++++++.++.+....-.+..+++++++||++...+++..++-+.|+.+..+.+.
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence 3567899999999999999999999999999999999999999999999999999988876544
No 106
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=90.27 E-value=1.5 Score=41.00 Aligned_cols=143 Identities=14% Similarity=0.091 Sum_probs=85.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcC-CCc-ccccchhhHHHHHHHHH
Q 018400 180 SWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSE-PSD-WKLGLDIGLVAVLYSAV 257 (356)
Q Consensus 180 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~-~~~~~~~~~~~l~~~g~ 257 (356)
.-..|.++..+++++-+.+.+=.||. |+.+ -...=..+.+++-++.-.+.....-| ..+ ....+...+......|+
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc-CCcc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 34679999999999999988888886 5553 55555555555555554443322221 111 11112223444445555
Q ss_pred HhhHHHHhHHHhhhccCCCcee-eccchhHHHHHHHHHHHHhcC-------cccchhhhhHHHHHHhhhhheeccc
Q 018400 258 IGTGFRVGLCTWCLSRTGPLYV-SMFKPLAIVFSIVMDVVIVGD-------AFCLGSLIGAMIIVAGFYAVMWGKS 325 (356)
Q Consensus 258 ~~~~~~~~~~~~al~~~~~~~~-s~~~~~~pv~a~~~~~~~~ge-------~~~~~~~iG~~li~~g~~l~~~~~~ 325 (356)
-=+++-..|-.+.|+.+.+.. ++...+.-+++.++--++.|+ +-....++|..+.++|+.+..+.-.
T Consensus 82 -lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~ 156 (344)
T PF06379_consen 82 -LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS 156 (344)
T ss_pred -HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence 344566677778888877654 344445555555555554332 2234678999999999999876533
No 107
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=88.49 E-value=7.9 Score=29.64 Aligned_cols=111 Identities=17% Similarity=0.206 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCC------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHH
Q 018400 16 GMVIVLLAQVSNMEVIKAAMSKGIN------KYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSS 89 (356)
Q Consensus 16 ~~ll~~~~~g~~~~~~k~~~~~~~~------~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 89 (356)
.++....+||.+.++.|.... +.+ .....+.|-..... .+++.+.. -+++-.+
T Consensus 7 ~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl~----------------l~w~Y~iP----FllNqcg 65 (125)
T KOG4831|consen 7 KLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTLF----------------LNWEYLIP----FLLNQCG 65 (125)
T ss_pred HHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHHH----------------HhHHHHHH----HHHHHhh
Confidence 466778999999999998865 332 22222233222110 11122222 2233455
Q ss_pred HHHHHHHhhccChhhHhHhhh-hhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 90 QIFSFVGIQYSSPTLSTAMLN-LIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 90 ~~~~~~al~~~~~~~a~~l~~-~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
..+||.-+++.+-+.+..+.+ ++-.|+.+.+..+-.|....+ .++|..+.++|+.+++
T Consensus 66 Saly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~------a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 66 SALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGL------ALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccce------eehhhhHHhhhhhhee
Confidence 677889999999999988866 577777777775555555555 8899999999987764
No 108
>PRK02237 hypothetical protein; Provisional
Probab=88.37 E-value=1.7 Score=33.43 Aligned_cols=46 Identities=20% Similarity=0.193 Sum_probs=40.7
Q ss_pred eeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecc
Q 018400 279 VSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGK 324 (356)
Q Consensus 279 ~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~ 324 (356)
.+.+...-.+.++++++.+-|++|+...++|..++++|+.++.+..
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 3677888899999999999999999999999999999998876554
No 109
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=86.57 E-value=8.7 Score=35.44 Aligned_cols=121 Identities=12% Similarity=0.223 Sum_probs=83.0
Q ss_pred HHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCccc-ccchhhHH-HHHHHHHHhhHHHHhHHHhhhccCCCceee
Q 018400 203 ALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWK-LGLDIGLV-AVLYSAVIGTGFRVGLCTWCLSRTGPLYVS 280 (356)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~-~l~~~g~~~~~~~~~~~~~al~~~~~~~~s 280 (356)
+...++.+=|+.++.+++.+-..+....-...+...+.-. ..+..+.. .++-.|+ ++++=.++-++++++++.+..+
T Consensus 36 ~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSlYT 114 (349)
T KOG1443|consen 36 KWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSLYT 114 (349)
T ss_pred hhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeeeee
Confidence 3333344446777777766655555444443333221111 11111222 2223454 7788889999999999999999
Q ss_pred ccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecc
Q 018400 281 MFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGK 324 (356)
Q Consensus 281 ~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~ 324 (356)
+.....++|-.+++.++-=|++.+....-..+|-+|+.+..+..
T Consensus 115 M~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks 158 (349)
T KOG1443|consen 115 MTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS 158 (349)
T ss_pred eccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence 99999999999999998889999998888888889998887644
No 110
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=84.30 E-value=2.1 Score=32.64 Aligned_cols=58 Identities=16% Similarity=0.210 Sum_probs=45.3
Q ss_pred HhHHHhhhccCCCceeeccc-hhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhhe
Q 018400 264 VGLCTWCLSRTGPLYVSMFK-PLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVM 321 (356)
Q Consensus 264 ~~~~~~al~~~~~~~~s~~~-~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~ 321 (356)
-.+|++-+++.+.+.+.++. .+...++.+.+..+-.|......++|..+++.|+++..
T Consensus 66 Saly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 66 SALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 45677778999988887765 45788899999986444556778899999999998753
No 111
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=83.58 E-value=3.1 Score=37.64 Aligned_cols=139 Identities=19% Similarity=0.133 Sum_probs=93.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHHhcc----CCCCCC-cHHHHHHHHHHH
Q 018400 10 AALPSVGMVIVLLAQVSNMEVIKAAMSK-GINKYVIIVYSDALSSLFFLFCSFLFHR----SERPQL-TFSILCSFFLLS 83 (356)
Q Consensus 10 ~~~~~~~~ll~~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~~~l~~~~~~~~~----~~~~~~-~~~~~~~~~~~g 83 (356)
...|.++.+++.+.-+.+.+..|..... +-.-+.+.++-...+.++++|...+.+. ...++. ..+-|....+.|
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG 262 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence 4679999999999999999999977652 1235677888889999999998777653 122343 445565666667
Q ss_pred HHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400 84 VFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF 154 (356)
Q Consensus 84 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~ 154 (356)
++|+..++--.+=++.++|-.--+=..--...=.+++..+++|..+.. .|.+-++.+.|-..-+.
T Consensus 263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~ 327 (347)
T KOG1442|consen 263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTL 327 (347)
T ss_pred HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHH
Confidence 777444443444445555432211111222333567888999999999 89998888888777654
No 112
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=83.14 E-value=4.2 Score=31.20 Aligned_cols=46 Identities=20% Similarity=0.236 Sum_probs=40.9
Q ss_pred eccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400 280 SMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS 325 (356)
Q Consensus 280 s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~ 325 (356)
+.+...-.+.+.++++.+=|++|+...++|..++++|+.+..+..|
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 6677888999999999999999999999999999999988876543
No 113
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=81.16 E-value=10 Score=34.36 Aligned_cols=136 Identities=15% Similarity=0.154 Sum_probs=93.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCC------CcHHHHHHHHHHHH
Q 018400 12 LPSVGMVIVLLAQVSNMEVIKAAMS-KGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQ------LTFSILCSFFLLSV 84 (356)
Q Consensus 12 ~~~~~~ll~~~~~g~~~~~~k~~~~-~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~g~ 84 (356)
.|+...-.+.+.=+...-+...++. +.-+...++++.+.++.++++........ ..+. -+.|..-+.++.++
T Consensus 190 ~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge-~f~a~~fcaehp~~tyGy~~~~s~ 268 (367)
T KOG1582|consen 190 IGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGE-LFSAWTFCAEHPVRTYGYAFLFSL 268 (367)
T ss_pred eeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhccc-chhhhHHHHhCcHhHHHHHHHHHH
Confidence 3444333333333444444444443 23566788888888888777665544332 2111 13456667777777
Q ss_pred HHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400 85 FGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF 154 (356)
Q Consensus 85 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~ 154 (356)
.+.+++.+...=++.-++..+..+...--..|.++|.+++..+++.. ...+..+.+.|+.+=..
T Consensus 269 ~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~y 332 (367)
T KOG1582|consen 269 AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMY 332 (367)
T ss_pred HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcc
Confidence 77777776666667778888888888888999999999999999999 88999999999988654
No 114
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=81.10 E-value=1.5 Score=39.75 Aligned_cols=65 Identities=14% Similarity=0.100 Sum_probs=57.7
Q ss_pred hhHHHHhHHHhhhccCCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheec
Q 018400 259 GTGFRVGLCTWCLSRTGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWG 323 (356)
Q Consensus 259 ~~~~~~~~~~~al~~~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~ 323 (356)
+-..+-.+++.++..++++...++.....+|+.+++.-+++.+++..||+|...+.+|+..+-..
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 55566677888888999999999999999999999999999999999999999999998877543
No 115
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=78.99 E-value=42 Score=29.05 Aligned_cols=31 Identities=13% Similarity=0.253 Sum_probs=20.4
Q ss_pred HHHHHHHhcCcccchhhhhHHHHH--Hhhhhhe
Q 018400 291 IVMDVVIVGDAFCLGSLIGAMIIV--AGFYAVM 321 (356)
Q Consensus 291 ~~~~~~~~ge~~~~~~~iG~~li~--~g~~l~~ 321 (356)
-.+|..++++..-+....|..+.+ .|.+...
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La 165 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLA 165 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 445777788887778888876665 3444443
No 116
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=78.22 E-value=7.1 Score=29.78 Aligned_cols=47 Identities=23% Similarity=0.237 Sum_probs=40.9
Q ss_pred eeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheeccc
Q 018400 279 VSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKS 325 (356)
Q Consensus 279 ~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~ 325 (356)
.+.+...-.+.+.++.+++=|..|+...++|..+.++|+.++....+
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 36677888999999999999999999999999999999888776543
No 117
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=76.03 E-value=1.3 Score=40.56 Aligned_cols=130 Identities=9% Similarity=0.041 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCC-----c------ccccchhhHHHHHHHHH
Q 018400 189 AAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPS-----D------WKLGLDIGLVAVLYSAV 257 (356)
Q Consensus 189 l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~------~~~~~~~~~~~l~~~g~ 257 (356)
+++.+||+-+-..+|...|+.. ....+.|=+.++.++...+..++-+... . ............+.-|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR-~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGR-LPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCC-ccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 4567888888888887766542 2223445555555554444433322111 1 11111112222233344
Q ss_pred HhhHHHHhHHHhhhccCCCceeeccc-hhHHHHHHHHHHHHhcCccc--chhhhhHHHHHHhhhhhe
Q 018400 258 IGTGFRVGLCTWCLSRTGPLYVSMFK-PLAIVFSIVMDVVIVGDAFC--LGSLIGAMIIVAGFYAVM 321 (356)
Q Consensus 258 ~~~~~~~~~~~~al~~~~~~~~s~~~-~~~pv~a~~~~~~~~ge~~~--~~~~iG~~li~~g~~l~~ 321 (356)
.--++-.+..+++...+.+.+-++. .+.-+.++.+-|+ ++.+.+ .....|..++++++.+-.
T Consensus 81 -vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 81 -VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred -hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence 4456777777777777766665443 2333445555564 355554 345578888887776654
No 118
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=70.33 E-value=86 Score=29.83 Aligned_cols=19 Identities=21% Similarity=-0.143 Sum_probs=7.6
Q ss_pred HHHHHHHHHHhhHHHHhHH
Q 018400 249 LVAVLYSAVIGTGFRVGLC 267 (356)
Q Consensus 249 ~~~l~~~g~~~~~~~~~~~ 267 (356)
++.+...+++...+++.+.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~ 80 (385)
T PF03547_consen 62 LWFIPVFAFIIFILGLLLG 80 (385)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 3333333333444444443
No 119
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=69.21 E-value=72 Score=27.25 Aligned_cols=115 Identities=10% Similarity=0.095 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhc-cCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 018400 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFH-RSERPQLTFSILCSFFLLSVFGCSSQI 91 (356)
Q Consensus 13 ~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~ 91 (356)
+.+++-+.+++-|.+..+.+.+. .+.-..........++.......++.+ +..+. .|..++++++......+-+.
T Consensus 101 sLl~lg~~aLlsgitaff~~nA~--~~GlItlll~a~vgGfamy~my~y~yr~~ad~s--qr~~~~K~~lv~~~sm~lWi 176 (226)
T COG4858 101 SLLFLGAMALLSGITAFFQKNAQ--VYGLITLLLTAVVGGFAMYIMYYYAYRMRADNS--QRPGTWKYLLVAVLSMLLWI 176 (226)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCc--chhHHHHHHHHHhhhHHHHHHHHHHHHhhcccc--cCCchHHHHHHHHHHHHHHH
Confidence 44555555677777777777753 344444444444444443333333222 22111 11234455555555555666
Q ss_pred HHHHHhhccChhhHhHhhhhhH--HHHHHHH-HHHhhcccccc
Q 018400 92 FSFVGIQYSSPTLSTAMLNLIP--AFTFVLA-IIFRLEKLNWE 131 (356)
Q Consensus 92 ~~~~al~~~~~~~a~~l~~~~P--v~~~lls-~~~l~e~~~~~ 131 (356)
..+.+-.+.|++..-.+-...- +=.++++ .+.+|.|.|.+
T Consensus 177 ~v~i~t~~lPtslN~~L~pi~l~IiGav~lalRfylkkk~NIq 219 (226)
T COG4858 177 AVMIATVFLPTSLNPQLPPIALTIIGAVILALRFYLKKKKNIQ 219 (226)
T ss_pred HHHHHHhhCCCcCCcCCchHHHHHHHHHHHHHHHHHHHhhccc
Confidence 6667777777775544432211 1112222 46667777766
No 120
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=69.21 E-value=76 Score=27.52 Aligned_cols=58 Identities=17% Similarity=0.206 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhHhhhh---hHHHHHHHHHHHhhcccccc
Q 018400 74 SILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNL---IPAFTFVLAIIFRLEKLNWE 131 (356)
Q Consensus 74 ~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~---~Pv~~~lls~~~l~e~~~~~ 131 (356)
+.+++.++.++.........+...+..++...-.+... .--...+....++|.|.+..
T Consensus 144 ~~~~k~~~~~~~~~~~w~~~~~~~~~lp~~inp~l~~~~~iiig~i~~~~~~~lkkk~~i~ 204 (206)
T PF06570_consen 144 PSWWKYILISVLAMVLWIVIFVLTSFLPPVINPVLPPWVYIIIGVIAFALRFYLKKKYNIT 204 (206)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHccccCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 44555555555554555555555565666543332221 11122233345556666543
No 121
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=67.85 E-value=1.4e+02 Score=30.07 Aligned_cols=17 Identities=12% Similarity=-0.005 Sum_probs=9.6
Q ss_pred ccchhHHHHHHHHHHHH
Q 018400 281 MFKPLAIVFSIVMDVVI 297 (356)
Q Consensus 281 ~~~~~~pv~a~~~~~~~ 297 (356)
......|+-+.++|.+.
T Consensus 351 ~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 351 VFFGGMPLGSLLWGFLA 367 (524)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444566666666653
No 122
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=65.91 E-value=6.6 Score=30.06 Aligned_cols=30 Identities=17% Similarity=0.316 Sum_probs=26.1
Q ss_pred HHHHHHHhcCcccchhhhhHHHHHHhhhhh
Q 018400 291 IVMDVVIVGDAFCLGSLIGAMIIVAGFYAV 320 (356)
Q Consensus 291 ~~~~~~~~ge~~~~~~~iG~~li~~g~~l~ 320 (356)
..++.+.++|++++....|..+++++++..
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 456788999999999999999999887764
No 123
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=65.45 E-value=54 Score=25.20 Aligned_cols=46 Identities=11% Similarity=0.196 Sum_probs=28.8
Q ss_pred cChhhHhHhhh-hhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhh
Q 018400 100 SSPTLSTAMLN-LIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (356)
Q Consensus 100 ~~~~~a~~l~~-~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l 151 (356)
-+.++--+++= .+-..-..++.+++||+++|. ...|.++.+.++..
T Consensus 59 ~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n------~l~af~~i~~av~f 105 (108)
T PF04342_consen 59 FSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWN------YLWAFLCILGAVYF 105 (108)
T ss_pred cCHHHHHHHHHHHhhheeHHHHHHHhCCCccHH------HHHHHHHHHHhhhe
Confidence 33444334432 233344577889999999999 88887766555443
No 124
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=56.84 E-value=1.8e+02 Score=27.71 Aligned_cols=117 Identities=15% Similarity=0.176 Sum_probs=51.9
Q ss_pred HHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHH--HHHHHHHhhHHHHhHHHhhhccCCCceee
Q 018400 203 ALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVA--VLYSAVIGTGFRVGLCTWCLSRTGPLYVS 280 (356)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~al~~~~~~~~s 280 (356)
..+..+..+++--....++...+=.++......++. +....+.-... .-..++.+-.+...-+-+..+..++.-+.
T Consensus 58 E~lA~~vG~~~G~Lina~f~~~iEvil~~~al~~G~--~~lvr~Si~gsIm~~~llv~GlslllGglr~~~Q~fN~~~a~ 135 (368)
T COG0387 58 EVLAARVGEPYGSLINALFGNAIEVILIVAALKSGS--PTLVRDSLYGSIMINLLLVVGLSLLLGGLRHKTQPFNPHGAG 135 (368)
T ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhCCC--chhhHHHHHHHHHHHHHHHHHHHHHHcchhhceeecchhhHH
Confidence 344455445665555555555554444444343332 21111111122 12233333333334444555555544443
Q ss_pred ccchh---HHHHHHHHHHHHh---cCcccchhhhhHHHHHHhhhhhe
Q 018400 281 MFKPL---AIVFSIVMDVVIV---GDAFCLGSLIGAMIIVAGFYAVM 321 (356)
Q Consensus 281 ~~~~~---~pv~a~~~~~~~~---ge~~~~~~~iG~~li~~g~~l~~ 321 (356)
....+ ....+.+.-.++- +...+..+-+++.++.+++|...
T Consensus 136 ~~~~~L~~~~~ialv~P~~~~~~~~~~~~~~~s~~~avv~i~~Y~lf 182 (368)
T COG0387 136 TYLALLFTAATIALVLPTFFPYTGGGNFSLGQSLFVAVVLIALYGLF 182 (368)
T ss_pred HHHHHHHHHHHHHhhhhhhhcccCCCcchHhHHHHHHHHHHHHHHHH
Confidence 33221 1122222222221 23455777888888888877764
No 125
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.49 E-value=16 Score=27.55 Aligned_cols=32 Identities=13% Similarity=0.304 Sum_probs=27.9
Q ss_pred HHHHHHHhcCcccchhhhhHHHHHHhhhhhee
Q 018400 291 IVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMW 322 (356)
Q Consensus 291 ~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~ 322 (356)
..++.+.++|++.+..+.|..+++.|++...+
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 45688899999999999999999999887653
No 126
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=53.55 E-value=1.4e+02 Score=25.23 Aligned_cols=45 Identities=18% Similarity=0.146 Sum_probs=31.2
Q ss_pred cccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceeeccchh
Q 018400 240 DWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSMFKPL 285 (356)
Q Consensus 240 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~~~~~ 285 (356)
+|..........++..|+ .+.++-++|...++|...--.++...+
T Consensus 62 ~wk~t~~G~~igi~~~gv-~Si~aAllY~~~l~k~~g~W~Gi~YG~ 106 (173)
T PF11085_consen 62 DWKNTWLGNLIGIVFIGV-FSIVAALLYYALLKKFKGPWPGILYGL 106 (173)
T ss_pred chhhhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 355444445666777787 577888899999999887666655443
No 127
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=53.33 E-value=6.1 Score=36.33 Aligned_cols=114 Identities=17% Similarity=0.072 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHH-hcc-----CCCC-------CCcHHHHHHHHHHH
Q 018400 17 MVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFL-FHR-----SERP-------QLTFSILCSFFLLS 83 (356)
Q Consensus 17 ~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~-~~~-----~~~~-------~~~~~~~~~~~~~g 83 (356)
|+++.++||..+...|.+-.++--| +...+-+.++.++..++.-+ ... ...| +-++......+..|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 3567899999999999997533222 23344444444443333222 111 0111 22445555666667
Q ss_pred HHHHHHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhcccccc
Q 018400 84 VFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWE 131 (356)
Q Consensus 84 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~ 131 (356)
++-.+++++..+|+.+.+.+.+-.+.....++.-..-..++..|.++.
T Consensus 80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfld~~~n~a 127 (336)
T PF07168_consen 80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFLDPKINRA 127 (336)
T ss_pred HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeeccCCCCCc
Confidence 777899999999999999988887766544444444455666776644
No 128
>PRK02237 hypothetical protein; Provisional
Probab=51.80 E-value=94 Score=24.02 Aligned_cols=38 Identities=11% Similarity=0.087 Sum_probs=31.6
Q ss_pred hhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400 111 LIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF 154 (356)
Q Consensus 111 ~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~ 154 (356)
...+...+-.+.+-++|+++. .++|..+|++|+.++.+
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~------D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRW------DWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChh------HHHhHHHHHHhHHHhee
Confidence 444555567788999999999 99999999999998863
No 129
>PF03595 SLAC1: Voltage-dependent anion channel; InterPro: IPR004695 Two members of the Tellurite-Resistance/Dicarboxylate Transporter (TDT) family have been functionally characterised. One is the TehA protein of Escherichia coli which has been implicated in resistance to tellurite; the other is the Mae1 protein of Schizosaccharomyces pombe which functions in the uptake of malate and other dicarboxylates by a proton symport mechanism. These proteins exhibit 10 putative transmembrane a-helical spanners (TMSs).; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3M76_A 3M7C_A 3M7E_A 3M74_A 3M7B_A 3M71_A 3M72_A 3M77_A 3M7L_A 3M75_A ....
Probab=51.39 E-value=2e+02 Score=26.60 Aligned_cols=78 Identities=13% Similarity=0.083 Sum_probs=44.9
Q ss_pred chhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHH----H---HHHH-HHHHHhh
Q 018400 138 KSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSA----W---FILQ-ALILRKF 209 (356)
Q Consensus 138 ~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~----~---~v~~-~~~~~~~ 209 (356)
.+.+..++..|+..+.. .-+. ........+.++..++.+.+.. + .+.. |+..++.
T Consensus 6 ~~f~~~mGtg~l~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~el 68 (330)
T PF03595_consen 6 AWFGMVMGTGGLSNLLY-LLPY----------------HFGGLAILSEVLFILALILFLVLLVLYLLRWIRYPKAFKAEL 68 (330)
T ss_dssp GGGHHHHHHHHHHHHHH-TTTT----------------TSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHH----------------hccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 47888888888777742 1111 2344556677777777777666 2 2222 2333444
Q ss_pred chhHHHHHHHHHHHHHHHHHHHH
Q 018400 210 AAVLIIMFYLFFFNTILSTAFAL 232 (356)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~~ 232 (356)
.||....++.....+...+....
T Consensus 69 ~~p~~~~f~~t~~m~~~~l~~~~ 91 (330)
T PF03595_consen 69 RHPVRSSFFPTFPMALMLLAAFI 91 (330)
T ss_dssp HSTTGGGGGGHHHHHHHHHHHHH
T ss_pred cCCcccchHHHHHHHHHHHHHHH
Confidence 45777777766666655554443
No 130
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=47.29 E-value=71 Score=24.61 Aligned_cols=38 Identities=8% Similarity=0.128 Sum_probs=32.2
Q ss_pred hhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400 111 LIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF 154 (356)
Q Consensus 111 ~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~ 154 (356)
...+...+-.+.+-|+||++. .++|..+|++|+.++.+
T Consensus 66 vfI~~Sl~W~w~vdg~~Pd~~------D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 66 VFIVASLLWGWLVDGVRPDRW------DWIGAAICLVGVAIILF 103 (107)
T ss_pred hHHHHHHHHHhhhcCcCCChH------HHHhHHHHHHhHHheEe
Confidence 455556667788999999999 99999999999999864
No 131
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=46.37 E-value=7.4 Score=24.57 Aligned_cols=16 Identities=19% Similarity=0.187 Sum_probs=7.5
Q ss_pred ccchhhhhHHHHHHhh
Q 018400 302 FCLGSLIGAMIIVAGF 317 (356)
Q Consensus 302 ~~~~~~iG~~li~~g~ 317 (356)
|++..++-.++|+.|+
T Consensus 2 p~wlt~iFsvvIil~I 17 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGI 17 (49)
T ss_pred chHHHHHHHHHHHHHH
Confidence 3444444444455444
No 132
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=46.29 E-value=1.2e+02 Score=23.36 Aligned_cols=38 Identities=13% Similarity=0.155 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhee
Q 018400 111 LIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF 154 (356)
Q Consensus 111 ~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~ 154 (356)
...+...+-.+..-+.++++. .+.|..+|++|+.++.+
T Consensus 67 vyI~~sL~W~~~Vdg~~pdr~------D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 67 VYIAASLAWLWVVDGVRPDRY------DWIGAAICLAGVAVILF 104 (109)
T ss_pred hHHHHHHHHHHHHcCcCCcHH------HhhhHHHHHhceeeeEe
Confidence 344444555677889999999 89999999999888864
No 133
>PRK11010 ampG muropeptide transporter; Validated
Probab=45.37 E-value=3.2e+02 Score=27.06 Aligned_cols=18 Identities=17% Similarity=0.231 Sum_probs=9.2
Q ss_pred hhhhHHHHHHhhhhheec
Q 018400 306 SLIGAMIIVAGFYAVMWG 323 (356)
Q Consensus 306 ~~iG~~li~~g~~l~~~~ 323 (356)
..+..++.+.|+++..+.
T Consensus 385 f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 385 YLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 444555555565555433
No 134
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=44.91 E-value=78 Score=26.39 Aligned_cols=52 Identities=17% Similarity=0.117 Sum_probs=32.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----chhHHHHHHHHHHHHHHHHHHH
Q 018400 180 SWILGGFFLAAEAFMNSAWFILQALILRKF-----AAVLIIMFYLFFFNTILSTAFA 231 (356)
Q Consensus 180 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~ 231 (356)
+..-..+..+.+++.|++-.++-...+++. |.|..-..+.++.+.++...+.
T Consensus 129 ~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaFm 185 (193)
T COG4657 129 NFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAFM 185 (193)
T ss_pred hHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHc
Confidence 344467788888889988888777665553 3344444555555555554443
No 135
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=44.10 E-value=36 Score=31.10 Aligned_cols=69 Identities=12% Similarity=0.220 Sum_probs=58.8
Q ss_pred HHHhHHHhhhcc-CCCceeeccchhHHHHHHHHHHHHhcCcccchhhhhHHHHHHhhhhheecccccccc
Q 018400 262 FRVGLCTWCLSR-TGPLYVSMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMIIVAGFYAVMWGKSKEEKT 330 (356)
Q Consensus 262 ~~~~~~~~al~~-~~~~~~s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li~~g~~l~~~~~~~~~~~ 330 (356)
..-.+.+++++. ++....-++..-.++.+.+.+|++.|.+-+..|+....++-+|+++....+.++-+.
T Consensus 76 ~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~ 145 (330)
T KOG1583|consen 76 IVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS 145 (330)
T ss_pred eeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence 345567777775 777788889999999999999999999999999999999999999998877665544
No 136
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=42.69 E-value=4.4e+02 Score=28.01 Aligned_cols=44 Identities=14% Similarity=0.081 Sum_probs=30.8
Q ss_pred hhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhh
Q 018400 103 TLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVV 152 (356)
Q Consensus 103 ~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv 152 (356)
+++.++..++|+-.+.++.....+|.+.. .+.+.+-.++|.+-+
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~------~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDK------AFFSALGVLLGAISI 54 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccch------HHHHHHHHHHHHHHh
Confidence 56677888999999999998887775444 455544455565544
No 137
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=39.94 E-value=42 Score=30.36 Aligned_cols=135 Identities=9% Similarity=0.061 Sum_probs=82.2
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHH-H
Q 018400 9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-C 87 (356)
Q Consensus 9 ~~~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~ 87 (356)
+..+|-.++++++.+.+.+.+.-.+..+ ..|...+...-.+.++++-..= .+..+++..-+.|..-....+...+. +
T Consensus 163 np~~GD~lvi~GATlYaVSNv~EEflvk-n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~yl~f~L~MF 240 (336)
T KOG2766|consen 163 NPVKGDFLVIAGATLYAVSNVSEEFLVK-NADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFLYLRFALTMF 240 (336)
T ss_pred CCccCcEEEEecceeeeeccccHHHHHh-cCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHHHHHHHHHHH
Confidence 3456777888899999999999999988 7888887777777776665443 33444333333332111111122222 2
Q ss_pred HHHHHHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHHHhhhhhhhe
Q 018400 88 SSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (356)
Q Consensus 88 ~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~ 153 (356)
..+.+.=.-++..+++...+-.-++-+|..++ ..++-+..|. -.++......|.++-.
T Consensus 241 llYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wL------Y~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 241 LLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWL------YFLAFATIATGLIIYS 298 (336)
T ss_pred HHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhh------hHHHHHHHHHhhEEee
Confidence 22222223344444444333344555666555 5667779999 9999999999988765
No 138
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=39.88 E-value=3.3e+02 Score=25.74 Aligned_cols=29 Identities=3% Similarity=-0.094 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018400 182 ILGGFFLAAEAFMNSAWFILQALILRKFA 210 (356)
Q Consensus 182 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~ 210 (356)
..|.++...+............++.++.+
T Consensus 246 ~~g~~~~~~~~~~~i~g~~~~g~l~~r~g 274 (402)
T PRK11902 246 EVGIVNKTLGLAATIVGALAGGTLMVRLG 274 (402)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555544444444455555555555553
No 139
>PRK10489 enterobactin exporter EntS; Provisional
Probab=37.00 E-value=3.7e+02 Score=25.48 Aligned_cols=17 Identities=18% Similarity=0.303 Sum_probs=8.8
Q ss_pred hhhhHHHHHHhhhhhee
Q 018400 306 SLIGAMIIVAGFYAVMW 322 (356)
Q Consensus 306 ~~iG~~li~~g~~l~~~ 322 (356)
.+.|++..++++.....
T Consensus 382 ~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 382 SASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 44555555555555443
No 140
>COG0004 AmtB Ammonia permease [Inorganic ion transport and metabolism]
Probab=35.33 E-value=4.3e+02 Score=25.71 Aligned_cols=237 Identities=10% Similarity=-0.077 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHH
Q 018400 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQ 90 (356)
Q Consensus 11 ~~~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 90 (356)
+...++-..+.-.|+...-+.+.... |+.--.++=.-...+++....+..-|++.+..+.+.+......+-..+.-+..
T Consensus 133 w~~~vY~p~ahWvWggggwl~~~g~~-DFAGgtVVHi~aG~aaLa~a~~lG~R~g~~~~~~~pHNl~~~~lGa~lLWfGW 211 (409)
T COG0004 133 WSTLVYPPVAHWVWGGGGWLALLGAL-DFAGGTVVHINAGFAALAAALVLGKRIGGKPVAIPPHNLPLVVLGAALLWFGW 211 (409)
T ss_pred HHHHHhhhhheeEecCchHHHhcCce-ecCCCceEEechhHHHHHHHHHeecccCCCCCCCCCCchhHHHHHHHHHHHHH
Q ss_pred HHHHHHhhccChhh--HhHhhhhhHHHHHHHHHHHhh----ccccccccccccchhhHHHHhhhhhhheeccCCCCccCC
Q 018400 91 IFSFVGIQYSSPTL--STAMLNLIPAFTFVLAIIFRL----EKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEL 164 (356)
Q Consensus 91 ~~~~~al~~~~~~~--a~~l~~~~Pv~~~lls~~~l~----e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~ 164 (356)
+.++-+-....-.. ...+......-+..++|.+.. .|++ -.-..-=++.|.+.++
T Consensus 212 fGFN~GSal~~~~~a~~a~~nT~lAaa~g~l~w~~~e~~~~~Kp~--------~lg~~sG~vAGLVaIT----------- 272 (409)
T COG0004 212 FGFNAGSALAANGVAALAFVNTNLAAAAGALGWMLIEWLRNGKPS--------LLGAASGAVAGLVAIT----------- 272 (409)
T ss_pred ccCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--------hhhhhhHHHhHHHhcC-----------
Q ss_pred CCCCCCCccCCCCCcchHHHHHHH--HHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhc---CCC
Q 018400 165 SHSGSPRRLLLSPQLSWILGGFFL--AAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVS---EPS 239 (356)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~G~~~~--l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~ 239 (356)
+..+.-.+.|.+.. +.+.+|+-....+.||. +++|+.-........+..-.+...++..+ ...
T Consensus 273 ----------paag~V~p~~A~iiGii~g~i~~~a~~~lk~~l--~~DD~ld~f~vHGvgGi~G~i~~GiFa~~~~~~~~ 340 (409)
T COG0004 273 ----------PAAGFVSPWGALIIGLIAGVICYFAVKLLKKKL--GVDDALDVFGVHGVGGIVGAILTGIFAAPAVGGGG 340 (409)
T ss_pred ----------CcccccCcHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcccceeccchhhHHHHHHHHHhcCccccccC
Q ss_pred ccc----ccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCceee
Q 018400 240 DWK----LGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVS 280 (356)
Q Consensus 240 ~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s 280 (356)
.+. .....+...+....+.+..+.+.++ +.++.....+++
T Consensus 341 G~~~~~~~~l~~Q~~~v~~~~~~~~v~t~ii~-~vl~~~~gLRvs 384 (409)
T COG0004 341 GLFYGGGVQLGVQLLGVLVTIVYAFVVTFIIL-KVLKLIIGLRVS 384 (409)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCCCCC
No 141
>PF15102 TMEM154: TMEM154 protein family
Probab=34.54 E-value=44 Score=27.33 Aligned_cols=18 Identities=17% Similarity=0.355 Sum_probs=8.4
Q ss_pred HHHHHHhhhhheeccccc
Q 018400 310 AMIIVAGFYAVMWGKSKE 327 (356)
Q Consensus 310 ~~li~~g~~l~~~~~~~~ 327 (356)
+++++..++++.+.|||+
T Consensus 69 vlLLl~vV~lv~~~kRkr 86 (146)
T PF15102_consen 69 VLLLLSVVCLVIYYKRKR 86 (146)
T ss_pred HHHHHHHHHheeEEeecc
Confidence 334444455555444433
No 142
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=34.19 E-value=4.6e+02 Score=26.16 Aligned_cols=14 Identities=7% Similarity=0.081 Sum_probs=6.2
Q ss_pred hHHHHHHHHHHHHH
Q 018400 212 VLIIMFYLFFFNTI 225 (356)
Q Consensus 212 ~~~~~~~~~~~~~v 225 (356)
|......+..+..+
T Consensus 331 P~~a~~~~~~i~~l 344 (507)
T TIGR00910 331 PVPLVIIQGIITSI 344 (507)
T ss_pred cHHHHHHHHHHHHH
Confidence 44444444444433
No 143
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=33.42 E-value=1.3e+02 Score=22.64 Aligned_cols=61 Identities=13% Similarity=0.152 Sum_probs=27.1
Q ss_pred HhhhccCCCceeeccchhHHHHHHHHHHHH---hcC-cccchhhhhHHHHHHhhhhheecccccc
Q 018400 268 TWCLSRTGPLYVSMFKPLAIVFSIVMDVVI---VGD-AFCLGSLIGAMIIVAGFYAVMWGKSKEE 328 (356)
Q Consensus 268 ~~al~~~~~~~~s~~~~~~pv~a~~~~~~~---~ge-~~~~~~~iG~~li~~g~~l~~~~~~~~~ 328 (356)
..++++++...--.+-....+.+++++.+. -++ .+-...|.|...=+++.-+..-..+|++
T Consensus 22 Vq~IkkT~~v~~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t~r~~ 86 (93)
T PF06946_consen 22 VQAIKKTKVVPNKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFTNRSK 86 (93)
T ss_pred HHHHHHhccCCcchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHHhhhh
Confidence 344555543333333334444444444332 222 2223346676655666656543333333
No 144
>PRK10263 DNA translocase FtsK; Provisional
Probab=32.06 E-value=6.1e+02 Score=28.81 Aligned_cols=18 Identities=11% Similarity=-0.047 Sum_probs=9.5
Q ss_pred hhhHHHHHHHHHHHhhcc
Q 018400 110 NLIPAFTFVLAIIFRLEK 127 (356)
Q Consensus 110 ~~~Pv~~~lls~~~l~e~ 127 (356)
++.|++..+.++.+++.+
T Consensus 84 YLLP~LL~~~a~~l~R~r 101 (1355)
T PRK10263 84 YTIPVIIVGGCWFAWRHQ 101 (1355)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 344555555566655543
No 145
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=32.03 E-value=20 Score=28.42 Aligned_cols=18 Identities=22% Similarity=0.263 Sum_probs=12.8
Q ss_pred HHHHHHHHHHhhHHHHhH
Q 018400 249 LVAVLYSAVIGTGFRVGL 266 (356)
Q Consensus 249 ~~~l~~~g~~~~~~~~~~ 266 (356)
-..++..|++.+.++|.+
T Consensus 56 G~vili~GvvvT~vays~ 73 (129)
T PF15099_consen 56 GVVILIAGVVVTAVAYSF 73 (129)
T ss_pred hHHHHHHhhHhheeeEee
Confidence 345667788788888776
No 146
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=31.72 E-value=26 Score=28.53 Aligned_cols=26 Identities=4% Similarity=0.166 Sum_probs=16.5
Q ss_pred ccCCCceeeccchhHHHHHHHHHHHH
Q 018400 272 SRTGPLYVSMFKPLAIVFSIVMDVVI 297 (356)
Q Consensus 272 ~~~~~~~~s~~~~~~pv~a~~~~~~~ 297 (356)
..-+....+.+.|+.|.++.+++.++
T Consensus 70 ~EkslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 70 EEKSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455666777788777776665
No 147
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=31.60 E-value=3.2e+02 Score=23.07 Aligned_cols=34 Identities=15% Similarity=0.100 Sum_probs=20.0
Q ss_pred HHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHh
Q 018400 201 LQALILRKFAAVLIIMFYLFFFNTILSTAFALIVV 235 (356)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 235 (356)
..|+..++. |-.....+......+......++.+
T Consensus 120 ~~~~~~~R~-~~i~ag~~v~l~~~~~~l~~~l~~~ 153 (194)
T PF07698_consen 120 SVRRIRSRS-DIIKAGLLVGLVNALMILALGLIQG 153 (194)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 355665665 3666666666666666655655443
No 148
>COG4854 Predicted membrane protein [Function unknown]
Probab=30.99 E-value=1e+02 Score=24.00 Aligned_cols=52 Identities=17% Similarity=0.174 Sum_probs=33.5
Q ss_pred cchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018400 137 AKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKF 209 (356)
Q Consensus 137 ~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~ 209 (356)
-|..++..++.|++++.+ ++| .....+..+-+..+..-.+|..+-..++++.
T Consensus 73 iqV~~is~Al~gavl~a~-knP--------------------~~~~a~~al~~A~ca~ivLy~~fY~YYsrr~ 124 (126)
T COG4854 73 IQVFSISAALGGAVLLAL-KNP--------------------LHTNAAFALEFAVCAVIVLYLAFYMYYSRRA 124 (126)
T ss_pred EEEEEehHHHHHHHHHHh-cCc--------------------cccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 367888888999998864 333 2334566666666666666766666665553
No 149
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=30.84 E-value=37 Score=26.84 Aligned_cols=13 Identities=15% Similarity=0.457 Sum_probs=6.4
Q ss_pred hHHHHHHhhhhhe
Q 018400 309 GAMIIVAGFYAVM 321 (356)
Q Consensus 309 G~~li~~g~~l~~ 321 (356)
.++.+++|+++..
T Consensus 43 s~vvlvi~~~LLg 55 (125)
T PF15048_consen 43 SFVVLVISFFLLG 55 (125)
T ss_pred HHHHHHHHHHHHH
Confidence 3344445655554
No 150
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=29.74 E-value=1.6e+02 Score=25.52 Aligned_cols=22 Identities=9% Similarity=0.002 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 018400 13 PSVGMVIVLLAQVSNMEVIKAA 34 (356)
Q Consensus 13 ~~~~~ll~~~~~g~~~~~~k~~ 34 (356)
|++.+++.++..|.........
T Consensus 112 gi~tli~~~i~~G~~~~~~~~~ 133 (206)
T PF06570_consen 112 GIITLILVSIVGGLVFYFIFKY 133 (206)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777666666555433
No 151
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=29.06 E-value=68 Score=25.78 Aligned_cols=15 Identities=20% Similarity=0.574 Sum_probs=7.7
Q ss_pred hhhhHHHHHHhhhhh
Q 018400 306 SLIGAMIIVAGFYAV 320 (356)
Q Consensus 306 ~~iG~~li~~g~~l~ 320 (356)
.++|..+++.|+...
T Consensus 89 ~i~g~~~~~~G~~~i 103 (136)
T PF08507_consen 89 IIIGLLLFLVGVIYI 103 (136)
T ss_pred HHHHHHHHHHHHHHH
Confidence 345555555555443
No 152
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=28.95 E-value=28 Score=25.64 Aligned_cols=30 Identities=17% Similarity=0.315 Sum_probs=22.3
Q ss_pred cccchhhhhHHHHHHhhhhheecccccccc
Q 018400 301 AFCLGSLIGAMIIVAGFYAVMWGKSKEEKT 330 (356)
Q Consensus 301 ~~~~~~~iG~~li~~g~~l~~~~~~~~~~~ 330 (356)
..++..++|..++++|..++..++.+.+-.
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~~Pev~ 33 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFFRPEVS 33 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHCcchh
Confidence 457788999999999999887655444433
No 153
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=28.57 E-value=57 Score=27.30 Aligned_cols=12 Identities=25% Similarity=0.304 Sum_probs=5.3
Q ss_pred cccccccccccc
Q 018400 342 SREKVPLLQNRI 353 (356)
Q Consensus 342 ~~~~~~~~~~~~ 353 (356)
..|=.|+.++++
T Consensus 138 ~~Em~pL~~dde 149 (163)
T PF06679_consen 138 NVEMAPLEEDDE 149 (163)
T ss_pred cceecccCCCcc
Confidence 334446644433
No 154
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=28.22 E-value=19 Score=32.71 Aligned_cols=30 Identities=10% Similarity=0.173 Sum_probs=0.0
Q ss_pred cChhhHhHhhhhhHHHHHHHH-HHHhhcccc
Q 018400 100 SSPTLSTAMLNLIPAFTFVLA-IIFRLEKLN 129 (356)
Q Consensus 100 ~~~~~a~~l~~~~Pv~~~lls-~~~l~e~~~ 129 (356)
.+-+..+++.+.+-+.++++- +.++|+|+-
T Consensus 47 ~t~~a~~vl~sfAvvliiIIiIImlF~RrLL 77 (381)
T PF05297_consen 47 LTQGALTVLYSFAVVLIIIIIIIMLFKRRLL 77 (381)
T ss_dssp -------------------------------
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 333444455554444433333 344565553
No 155
>TIGR02005 PTS-IIBC-alpha PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose.
Probab=27.57 E-value=3.8e+02 Score=27.10 Aligned_cols=124 Identities=12% Similarity=-0.042 Sum_probs=64.6
Q ss_pred HHHHHHhhccccccccccccchhhHHHHhhhhhhheeccCCCCccCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHH
Q 018400 118 VLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSA 197 (356)
Q Consensus 118 lls~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~s~~~~a~ 197 (356)
.++...--+|-+++ +.-|+.++.+...+++ +-..++-..++++|-..|.+
T Consensus 291 alAmy~~A~~enrk------~v~~ll~saaltsflt------------------------GITEPiEFtFlFvAP~Ly~v 340 (524)
T TIGR02005 291 ALAMYATAPPENRK------KVAGLLIPATLTAVVV------------------------GITEPLEFTFLFIAPYLFVV 340 (524)
T ss_pred HHHHHHhcCHHHHH------HHHHHHHHHHHHHHHh------------------------cCCchHHHHHHHHHHHHHHH
Confidence 34444444444555 7777777666666664 12335667788888888888
Q ss_pred HHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHhhHHHHhHHHhhhccCCCc
Q 018400 198 WFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSAVIGTGFRVGLCTWCLSRTGPL 277 (356)
Q Consensus 198 ~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~al~~~~~~ 277 (356)
|.+++.-..--.. .+.+ .....+.+ +-++..... +........+++++..|++...+-|+.+.+.+++.+.-
T Consensus 341 Ha~L~Gl~~~i~~-~l~v--~g~~s~G~----ID~il~~~l-~~~~~~~~~~~~~i~iGi~~~~iYy~vF~f~I~kfnlk 412 (524)
T TIGR02005 341 HAVLAASMATVMY-AFGV--VGNMGGGL----IDFIATNWL-PLFKNHWGTYVTQIIIGLCFTAIYFLVFRFLILKFNIP 412 (524)
T ss_pred HHHHHHHHHHHHH-HHhh--hcccCCch----hHHHHhCcc-hhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 8887763211110 1111 00001111 111111100 00001011223447788888888899999999988775
Q ss_pred ee
Q 018400 278 YV 279 (356)
Q Consensus 278 ~~ 279 (356)
+-
T Consensus 413 TP 414 (524)
T TIGR02005 413 TP 414 (524)
T ss_pred CC
Confidence 43
No 156
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=27.31 E-value=63 Score=18.73 Aligned_cols=18 Identities=22% Similarity=0.292 Sum_probs=9.6
Q ss_pred cchhhhhHHHHHHhhhhh
Q 018400 303 CLGSLIGAMIIVAGFYAV 320 (356)
Q Consensus 303 ~~~~~iG~~li~~g~~l~ 320 (356)
....++|.+++..+.++.
T Consensus 11 ~~~~~~G~~l~~~~~~~~ 28 (34)
T TIGR01167 11 SLLLLLGLLLLGLGGLLL 28 (34)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 455667775555444443
No 157
>PRK11469 hypothetical protein; Provisional
Probab=27.14 E-value=30 Score=29.71 Aligned_cols=42 Identities=10% Similarity=0.101 Sum_probs=27.3
Q ss_pred eccchhHHHHHHHHHHHHhcCcccchhhhhHHHH-HHhhhhhe
Q 018400 280 SMFKPLAIVFSIVMDVVIVGDAFCLGSLIGAMII-VAGFYAVM 321 (356)
Q Consensus 280 s~~~~~~pv~a~~~~~~~~ge~~~~~~~iG~~li-~~g~~l~~ 321 (356)
+.+....|..+...+..+-+-......|+|..+. ..|..+..
T Consensus 44 g~~q~~m~~~g~~~G~~l~~~i~~~~~~i~~~lL~~lG~~mi~ 86 (188)
T PRK11469 44 GAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMII 86 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445777888888887764444445578887544 46777764
No 158
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=26.30 E-value=1.7e+02 Score=29.06 Aligned_cols=22 Identities=5% Similarity=0.283 Sum_probs=18.6
Q ss_pred ccchhhhhHHHHHHhhhhheec
Q 018400 302 FCLGSLIGAMIIVAGFYAVMWG 323 (356)
Q Consensus 302 ~~~~~~iG~~li~~g~~l~~~~ 323 (356)
++..|+++..++++|++++.+.
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~ 275 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILA 275 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHh
Confidence 6888999999999998877654
No 159
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=26.20 E-value=1.1e+02 Score=25.01 Aligned_cols=31 Identities=19% Similarity=0.276 Sum_probs=21.8
Q ss_pred cChhhHhHhhhhhHHHHHHHHHHHhhcccccc
Q 018400 100 SSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWE 131 (356)
Q Consensus 100 ~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~ 131 (356)
-+.-.++++.++.|+++.+++.++ -+.+...
T Consensus 72 kslL~sA~LvYi~PL~~l~v~~~L-a~~L~~~ 102 (150)
T COG3086 72 KSLLKSALLVYIFPLVGLFLGAIL-AQYLFFS 102 (150)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH-HHHHhhh
Confidence 345567889999999998888765 3334444
No 160
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=26.05 E-value=60 Score=20.25 Aligned_cols=17 Identities=35% Similarity=0.823 Sum_probs=9.7
Q ss_pred hHHHHHHhhhhheeccc
Q 018400 309 GAMIIVAGFYAVMWGKS 325 (356)
Q Consensus 309 G~~li~~g~~l~~~~~~ 325 (356)
|.++++.+.+++.|+++
T Consensus 22 ~vI~~vl~~~l~~~~rR 38 (40)
T PF08693_consen 22 GVIIIVLGAFLFFWYRR 38 (40)
T ss_pred HHHHHHHHHHhheEEec
Confidence 44555566666655544
No 161
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=25.80 E-value=8.3e+02 Score=26.03 Aligned_cols=31 Identities=10% Similarity=0.024 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHhCCCChhHHHHHHHHHHHHH
Q 018400 24 QVSNMEVIKAAMSKGINKYVIIVYSDALSSLF 55 (356)
Q Consensus 24 ~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~ 55 (356)
-+...+....+.+ +.+...---.|......+
T Consensus 317 l~~~~p~~~~i~~-gf~~p~~~~~R~~fi~~f 347 (843)
T PF09586_consen 317 LSFFIPPLNSIWN-GFSYPNGFPYRWSFIFIF 347 (843)
T ss_pred HHHHHHHHHHHHh-CCccccccchHHHHHHHH
Confidence 3445555566665 554433223565544433
No 162
>PRK10110 bifunctional PTS system maltose and glucose-specific transporter subunits IICB; Provisional
Probab=24.69 E-value=3.2e+02 Score=27.68 Aligned_cols=34 Identities=12% Similarity=-0.095 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHhhHHHHhHHHhhhccCCCceeec
Q 018400 248 GLVAVLYSAVIGTGFRVGLCTWCLSRTGPLYVSM 281 (356)
Q Consensus 248 ~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~~s~ 281 (356)
.|.+++..|++..++-|..+.+.+++.+.-+-+-
T Consensus 396 ~~~~~~~~g~~~~~iyy~vF~f~I~kfnlkTpGR 429 (530)
T PRK10110 396 KWYMVPVVAAIWFVVYYVIFRFAITRFNLKTPGR 429 (530)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 5777788898888888888889998877665443
No 163
>TIGR00544 lgt prolipoprotein diacylglyceryl transferase. The conversion of lipoprotein precursors into lipoproteins consists of three steps. First, the enzyme described by this model transfers a diacylglyceryl moiety from phosphatidylglycerol to the side chain of a Cys that will become the new N-terminus. Second, the signal peptide is removed by signal peptidase II. Finally, the free amino group of the new N-terminal Cys is acylated by apolipoprotein N-acyltransferase.
Probab=23.89 E-value=41 Score=30.84 Aligned_cols=24 Identities=8% Similarity=0.329 Sum_probs=19.2
Q ss_pred ccchhhhhHHHHHHhhhhheeccc
Q 018400 302 FCLGSLIGAMIIVAGFYAVMWGKS 325 (356)
Q Consensus 302 ~~~~~~iG~~li~~g~~l~~~~~~ 325 (356)
+|..|+++..++++|+.+..+.++
T Consensus 246 lt~~Q~~sl~~i~~g~~~~~~~~~ 269 (278)
T TIGR00544 246 ISMGQILSLLMIAGILIIMLLAYK 269 (278)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHh
Confidence 688999999999999887655443
No 164
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=22.68 E-value=5.8e+02 Score=23.13 Aligned_cols=18 Identities=0% Similarity=-0.138 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 018400 193 FMNSAWFILQALILRKFA 210 (356)
Q Consensus 193 ~~~a~~~v~~~~~~~~~~ 210 (356)
+.+.+......++.++.+
T Consensus 41 ~~~~~~~~~~g~l~dr~g 58 (379)
T TIGR00881 41 IAYGISKFVMGSVSDRSN 58 (379)
T ss_pred HHHHhhhhhhhHHHHhhC
Confidence 334444444555555553
No 165
>PF15345 TMEM51: Transmembrane protein 51
Probab=22.50 E-value=49 Score=29.22 Aligned_cols=22 Identities=9% Similarity=0.276 Sum_probs=14.0
Q ss_pred hhHHHHHHhhhhheeccccccc
Q 018400 308 IGAMIIVAGFYAVMWGKSKEEK 329 (356)
Q Consensus 308 iG~~li~~g~~l~~~~~~~~~~ 329 (356)
.|+++.+.++.+-.+.|+|++.
T Consensus 67 ~Gv~LLLLSICL~IR~KRr~rq 88 (233)
T PF15345_consen 67 SGVALLLLSICLSIRDKRRRRQ 88 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 4666677777777666655443
No 166
>COG2246 Predicted membrane protein [Function unknown]
Probab=22.42 E-value=3.4e+02 Score=21.95 Aligned_cols=59 Identities=12% Similarity=0.152 Sum_probs=35.4
Q ss_pred CcHHHHHHHHHHHHHH-HHHHHHHHHHhh--ccChhhHhHhhhhhHHHHHHHHHHHhhcccccccc
Q 018400 71 LTFSILCSFFLLSVFG-CSSQIFSFVGIQ--YSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENK 133 (356)
Q Consensus 71 ~~~~~~~~~~~~g~~~-~~~~~~~~~al~--~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~ 133 (356)
...++..++...|..+ ..+...++.-.+ ..+...+.++.. -+.++..++.+++.+.+++
T Consensus 8 ~~~~~~lrF~~VG~~~t~V~~~~~~ll~~~~~~~~~~A~~~a~----~~~ii~sf~~N~~wTF~~~ 69 (139)
T COG2246 8 FTLSRLLRFAIVGGLGTLVDFAVLWLLVKALGVPYALANAIAY----EAAIIFSFVLNRRWTFRDR 69 (139)
T ss_pred hHHHHHHHHHhcchHHHHHHHHHHHHHHHhcccchHHHHHHHH----HHHHHHHHHHHceeeEeec
Confidence 3557788999999999 444444444444 233444444433 3345556677788877765
No 167
>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=22.35 E-value=1.8e+02 Score=21.54 Aligned_cols=29 Identities=7% Similarity=0.188 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 018400 43 VIIVYSDALSSLFFLFCSFLFHRSERPQL 71 (356)
Q Consensus 43 ~~~~~r~~~~~~~l~~~~~~~~~~~~~~~ 71 (356)
+++..-.++..++++..++..++|.+|++
T Consensus 37 ~lvI~~iFil~VilwfvCC~kRkrsRrPI 65 (94)
T PF05393_consen 37 FLVICGIFILLVILWFVCCKKRKRSRRPI 65 (94)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCc
Confidence 34444444555666666666665555543
No 168
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=21.63 E-value=37 Score=27.25 Aligned_cols=21 Identities=14% Similarity=0.297 Sum_probs=14.3
Q ss_pred ceeeccchhHHHHHHHHHHHH
Q 018400 277 LYVSMFKPLAIVFSIVMDVVI 297 (356)
Q Consensus 277 ~~~s~~~~~~pv~a~~~~~~~ 297 (356)
..++.+.|.-|+++.+.+.++
T Consensus 68 ~~aa~l~Y~lPll~li~g~~l 88 (135)
T PF04246_consen 68 LKAAFLVYLLPLLALIAGAVL 88 (135)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345566677788887777765
No 169
>TIGR01998 PTS-II-BC-nag PTS system, N-acetylglucosamine-specific IIBC component. This model represents the combined B and C domains of the PTS transport system enzyme II specific for N-acetylglucosamine transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, N-acetylglucosamine-specific IIABC component". This family is most closely related to the glucose-specific PTS enzymes.
Probab=20.88 E-value=6e+02 Score=25.31 Aligned_cols=31 Identities=6% Similarity=0.014 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHhhHHHHhHHHhhhccCCCce
Q 018400 248 GLVAVLYSAVIGTGFRVGLCTWCLSRTGPLY 278 (356)
Q Consensus 248 ~~~~l~~~g~~~~~~~~~~~~~al~~~~~~~ 278 (356)
.|.+++..|++...+-|..+.+.+++.+.-+
T Consensus 349 ~~~~~~~iG~~~~~iyy~~F~~~I~k~~l~T 379 (476)
T TIGR01998 349 QPLMLLVQGLVFFALYYVVFRFAIRRFNLKT 379 (476)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 5777888898888888888889999887643
No 170
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=20.74 E-value=6.8e+02 Score=23.19 Aligned_cols=116 Identities=13% Similarity=0.067 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHH--HHHHHHHHhccCCCCCCcHHHHHH-HHHHHHHHHHHHH
Q 018400 15 VGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSL--FFLFCSFLFHRSERPQLTFSILCS-FFLLSVFGCSSQI 91 (356)
Q Consensus 15 ~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~ 91 (356)
.+-.+..+.++.++.+.++.+. +-+.+.+.|+..+.+ +.+|......-+++.+ +....+. ++..+++-++...
T Consensus 107 ~~ssIlLl~~Siss~iG~YiLa---pl~~~i~~~~gAaila~iviP~~~~y~ln~~~~-s~~~~R~~ll~~a~~QGvL~G 182 (299)
T PF05884_consen 107 SWSSILLLGFSISSFIGGYILA---PLFGIIFGPFGAAILAYIVIPLIAYYYLNKEDG-SLAESRLALLFFALFQGVLVG 182 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHhcchhHHHHHHHHHHHHHHhhcccccC-chHHHHHHHHHHHHHHHHHHH
Confidence 3334444567777788888765 344444444433322 2233332222111111 2222222 3333333333333
Q ss_pred HHHHHhhccChhhHhHhhhhhHHHHHHHHHHHhhccccccccccccchhhHHH
Q 018400 92 FSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFA 144 (356)
Q Consensus 92 ~~~~al~~~~~~~a~~l~~~~Pv~~~lls~~~l~e~~~~~~~~~~~~~~g~~l 144 (356)
.+++|.... ...+..++|+++.+.........-++. +.++...
T Consensus 183 ---a~ls~~~l~-sePf~~LT~iv~sfi~~~i~~~~~~R~------~lLg~~v 225 (299)
T PF05884_consen 183 ---AGLSHLYLS-SEPFIALTPIVSSFIYPLIAGHGTNRQ------KLLGIVV 225 (299)
T ss_pred ---HHhhccccc-CCcHHHHHHHHHHHHHHHHccCCcchH------HHHHHHH
Confidence 556665555 478888999998777777775544555 5655443
No 171
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=20.67 E-value=7.6e+02 Score=23.69 Aligned_cols=15 Identities=13% Similarity=0.082 Sum_probs=7.6
Q ss_pred chhhHHHHhhhhhhh
Q 018400 138 KSLGTFASIGGAFVV 152 (356)
Q Consensus 138 ~~~g~~l~~~Gv~lv 152 (356)
+-..+++.++..+..
T Consensus 13 ~~~~~~~~~~a~~~~ 27 (366)
T PRK10599 13 KETSLIFPVLALVVL 27 (366)
T ss_pred hHHHHHHHHHHHHHH
Confidence 445555555555444
No 172
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.40 E-value=4.4e+02 Score=25.16 Aligned_cols=29 Identities=17% Similarity=0.050 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHhCCCChhHHHHHHHHHH
Q 018400 23 AQVSNMEVIKAAMSKGINKYVIIVYSDALS 52 (356)
Q Consensus 23 ~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~ 52 (356)
.|.++.-+.|.+.+ ++.-....-..+.++
T Consensus 200 gWs~slY~i~ql~~-nLq~Iwieyr~yvLg 228 (452)
T KOG3817|consen 200 GWSISLYVIKQLAD-NLQLIWIEYRDYVLG 228 (452)
T ss_pred cchhHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 36666666666665 455554444444443
No 173
>COG1968 BacA Undecaprenyl pyrophosphate phosphatase [Lipid transport and metabolism]
Probab=20.24 E-value=6.7e+02 Score=22.91 Aligned_cols=89 Identities=10% Similarity=0.143 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 018400 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIF 92 (356)
Q Consensus 13 ~~~~~ll~~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 92 (356)
-.+..+++++--+......+...++.+-....+.+-.....++++..-...++++.+..+.-.++..+..|+..++.-
T Consensus 86 l~l~ilvatiPa~v~Gl~~~d~i~~~l~~~~~va~~lIv~gi~li~~e~~~~~~~~~~~~~l~~~da~~IGlaQ~lAl-- 163 (270)
T COG1968 86 LWLKILVATIPAVVLGLLFKDFIKSHLFNPRVVAIALIVGGILLILAEKLNKKPRLRDLDDLTLRDALIIGLAQCLAL-- 163 (270)
T ss_pred HHHHHHHHHHhHHHhhHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHhccccCcCChhhCCHHHHHHHHHHHHHHH--
Confidence 344555555555555556655444333334555555555555555544433321223333344566666666654432
Q ss_pred HHHHhhccChhh
Q 018400 93 SFVGIQYSSPTL 104 (356)
Q Consensus 93 ~~~al~~~~~~~ 104 (356)
.=|....+++.
T Consensus 164 -~PG~SRSGaTI 174 (270)
T COG1968 164 -IPGTSRSGATI 174 (270)
T ss_pred -cCCCCccHHHH
Confidence 13444444443
Done!