BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018401
(356 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50433|GLYM_SOLTU Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum
PE=2 SV=1
Length = 518
Score = 634 bits (1636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/321 (93%), Positives = 313/321 (97%), Gaps = 3/321 (0%)
Query: 1 MSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV 60
MSSLPNEAVY+KEK+GV WPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV
Sbjct: 30 MSSLPNEAVYDKEKSGVAWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV 89
Query: 61 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGS---LS 117
SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDP KWG + LS
Sbjct: 90 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLS 149
Query: 118 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 177
GSP+NFQVYTALLKPH+RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+ESTG
Sbjct: 150 GSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTG 209
Query: 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 237
YIDYDQLEKSATLFRPKLIVAGASAYARLYDY+RIRKVCNKQKAI+LADMAHISGLVAAG
Sbjct: 210 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVCNKQKAILLADMAHISGLVAAG 269
Query: 238 VIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGL 297
VIPSPF+YADVVTTTTHKSLRGPRGAMIF+RKGVKE+NKQGKEVFYDYE+KINQAVFPGL
Sbjct: 270 VIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQGKEVFYDYEDKINQAVFPGL 329
Query: 298 QGGPHNHTITGLAVALKQVCT 318
QGGPHNHTITGLAVALKQ T
Sbjct: 330 QGGPHNHTITGLAVALKQATT 350
>sp|P49357|GLYM_FLAPR Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria
pringlei PE=2 SV=1
Length = 517
Score = 627 bits (1616), Expect = e-179, Method: Compositional matrix adjust.
Identities = 298/321 (92%), Positives = 309/321 (96%), Gaps = 3/321 (0%)
Query: 1 MSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV 60
MSSLP+EAVYEKE+ GVTWPKQLNAPLEVVDPEIADIIE EKARQWKGLELIPSENFTS+
Sbjct: 30 MSSLPSEAVYEKERPGVTWPKQLNAPLEVVDPEIADIIELEKARQWKGLELIPSENFTSL 89
Query: 61 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGS---LS 117
SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDP KWG + LS
Sbjct: 90 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLS 149
Query: 118 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 177
GSP+NF VYTALLK HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG
Sbjct: 150 GSPANFHVYTALLKAHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 209
Query: 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 237
YIDYDQLEKSATLFRPKLIVAGASAYARLYDY RIRKVC+KQKAIMLADMAHISGLVAAG
Sbjct: 210 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAIMLADMAHISGLVAAG 269
Query: 238 VIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGL 297
VIPSPF+YADVVTTTTHKSLRGPRGAMIFFRKG+KE+NKQGKEVFYDYE+KINQAVFPGL
Sbjct: 270 VIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGLKEVNKQGKEVFYDYEDKINQAVFPGL 329
Query: 298 QGGPHNHTITGLAVALKQVCT 318
QGGPHNHTITGLAVALKQ T
Sbjct: 330 QGGPHNHTITGLAVALKQATT 350
>sp|Q9SZJ5|GLYM_ARATH Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis
thaliana GN=SHM1 PE=1 SV=1
Length = 517
Score = 622 bits (1605), Expect = e-177, Method: Compositional matrix adjust.
Identities = 295/321 (91%), Positives = 308/321 (95%), Gaps = 3/321 (0%)
Query: 1 MSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV 60
MSSLP+EAV EKE++ VTWPKQLNAPLE VDPEIADIIEHEKARQWKGLELIPSENFTSV
Sbjct: 29 MSSLPSEAVDEKERSRVTWPKQLNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSV 88
Query: 61 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGS---LS 117
SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDPEKWG + LS
Sbjct: 89 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLS 148
Query: 118 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 177
GSP+NF VYTALLKPH+RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+ESTG
Sbjct: 149 GSPANFHVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTG 208
Query: 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 237
YIDYDQ+EKSATLFRPKLIVAGASAYARLYDY RIRKVCNKQKA+MLADMAHISGLVAA
Sbjct: 209 YIDYDQMEKSATLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAN 268
Query: 238 VIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGL 297
VIPSPF+YADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEV YD+E+KINQAVFPGL
Sbjct: 269 VIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVLYDFEDKINQAVFPGL 328
Query: 298 QGGPHNHTITGLAVALKQVCT 318
QGGPHNHTITGLAVALKQ T
Sbjct: 329 QGGPHNHTITGLAVALKQATT 349
>sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum
PE=1 SV=1
Length = 518
Score = 621 bits (1601), Expect = e-177, Method: Compositional matrix adjust.
Identities = 293/320 (91%), Positives = 308/320 (96%), Gaps = 3/320 (0%)
Query: 2 SSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVS 61
SSLP+EAVY+KE VTWPKQLN+PLEV+DPEIADIIE EKARQWKGLELIPSENFTS+S
Sbjct: 31 SSLPDEAVYDKENPRVTWPKQLNSPLEVIDPEIADIIELEKARQWKGLELIPSENFTSLS 90
Query: 62 VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGS---LSG 118
VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDP KWG + LSG
Sbjct: 91 VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSG 150
Query: 119 SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 178
SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+ESTGY
Sbjct: 151 SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGY 210
Query: 179 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 238
IDYDQLEKSATLFRPKLIVAGASAYARLYDY RIRKVC+KQKA++LADMAHISGLVAAGV
Sbjct: 211 IDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAVLLADMAHISGLVAAGV 270
Query: 239 IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQ 298
IPSPF+YADVVTTTTHKSLRGPRGAMIFFRKG+KE+NKQGKEVFYDYE+KINQAVFPGLQ
Sbjct: 271 IPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGLKEVNKQGKEVFYDYEDKINQAVFPGLQ 330
Query: 299 GGPHNHTITGLAVALKQVCT 318
GGPHNHTITGLAVALKQ T
Sbjct: 331 GGPHNHTITGLAVALKQATT 350
>sp|P49358|GLYN_FLAPR Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria
pringlei PE=2 SV=1
Length = 517
Score = 613 bits (1581), Expect = e-175, Method: Compositional matrix adjust.
Identities = 294/321 (91%), Positives = 305/321 (95%), Gaps = 3/321 (0%)
Query: 1 MSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV 60
MSSLP+EAVYEKE+ GVTWPKQLNAPLEV DPEIADIIE EKARQWKGLELI SENFTS+
Sbjct: 30 MSSLPSEAVYEKERPGVTWPKQLNAPLEVGDPEIADIIELEKARQWKGLELILSENFTSL 89
Query: 61 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGS---LS 117
SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLD KWG + LS
Sbjct: 90 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDAAKWGVNVQPLS 149
Query: 118 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 177
GSP+NF VYTALLK HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG
Sbjct: 150 GSPANFHVYTALLKAHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 209
Query: 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 237
YIDYDQLEKSATLFRPKLIVAGASAYARLYDY RIRKVC+KQKAI+LADMAHISGLVAAG
Sbjct: 210 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHISGLVAAG 269
Query: 238 VIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGL 297
VIPSPF+YADVVTTTTHKSLRGPRGAMIFFRKGVKE+NKQGKEV YDYE+KINQAVFPGL
Sbjct: 270 VIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEVNKQGKEVLYDYEDKINQAVFPGL 329
Query: 298 QGGPHNHTITGLAVALKQVCT 318
QGGPHNHTITGLAVALKQ T
Sbjct: 330 QGGPHNHTITGLAVALKQATT 350
>sp|Q60V73|GLYC_CAEBR Serine hydroxymethyltransferase OS=Caenorhabditis briggsae
GN=mel-32 PE=3 SV=3
Length = 511
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/295 (67%), Positives = 242/295 (82%), Gaps = 3/295 (1%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
+E +DPE+ +I+++EK+RQ +GLELI SENFTS +VM A+GS M NKYSEGYPGARYYGG
Sbjct: 56 VEKIDPEVFNIMKNEKSRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGG 115
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWG---GSLSGSPSNFQVYTALLKPHDRIMALDLPH 143
NE+ID E LCQKRALE F LDP KWG SLSGSP+NF VYTAL+ + RIM LDLP
Sbjct: 116 NEFIDQMEILCQKRALEVFGLDPAKWGVNVQSLSGSPANFAVYTALVGANGRIMGLDLPD 175
Query: 144 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 203
GGHL+HG+ T +K+SA S FF++MPY+++ +G IDYD+LE++A LFRPK+++AG S Y
Sbjct: 176 GGHLTHGFFTPARKVSATSEFFQSMPYKVDAQSGLIDYDKLEENAMLFRPKVLIAGVSCY 235
Query: 204 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 263
AR DYER RK+ K A +++DMAHISGLVAAG+IPSPFEY+DVVTTTTHKSLRGPRGA
Sbjct: 236 ARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGA 295
Query: 264 MIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
MIF+RKGV+ +N +G E YD EEKIN AVFPGLQGGPHNHTI G+AVALKQ +
Sbjct: 296 MIFYRKGVRSVNAKGVETLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALKQCLS 350
>sp|Q10104|GLYM_SCHPO Serine hydroxymethyltransferase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=shm2 PE=3 SV=2
Length = 488
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/301 (68%), Positives = 239/301 (79%), Gaps = 3/301 (0%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L APL DP + I+E EK+RQ + + LI SENFTS +VM A+GS+M NKYSEGYPG
Sbjct: 28 KLLKAPLAECDPTVYKILESEKSRQKESIALIASENFTSRAVMDALGSIMQNKYSEGYPG 87
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSL---SGSPSNFQVYTALLKPHDRIM 137
ARYYGGNE+ID AE LCQ RALEAF LD EKWG ++ SGSP+N Q Y A++KPHDR+M
Sbjct: 88 ARYYGGNEFIDQAERLCQTRALEAFHLDGEKWGVNVQPHSGSPANLQAYQAVMKPHDRLM 147
Query: 138 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 197
LDLPHGGHLSHG+ T K ISAVS +F TMPY +N+ TG IDYD LEK+A FRPK+IV
Sbjct: 148 GLDLPHGGHLSHGFSTPQKAISAVSTYFSTMPYNVNKETGIIDYDSLEKAAIQFRPKVIV 207
Query: 198 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 257
AGASAYARL DY+R+RK+ A +L DMAHISGLVAAGVIPSPFEYAD+VTTTTHKSL
Sbjct: 208 AGASAYARLVDYKRMRKITEMCNAYLLCDMAHISGLVAAGVIPSPFEYADIVTTTTHKSL 267
Query: 258 RGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 317
RGPRGAMIF+RKG + +K+G + Y+ E+KIN +VFPG QGGPHNHTIT LAVAL Q
Sbjct: 268 RGPRGAMIFYRKGTRSHDKRGNPILYELEDKINFSVFPGHQGGPHNHTITALAVALGQAK 327
Query: 318 T 318
T
Sbjct: 328 T 328
>sp|O13972|GLYD_SCHPO Probable serine hydroxymethyltransferase, cytosolic
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC24C9.12c PE=3 SV=1
Length = 467
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 200/293 (68%), Positives = 240/293 (81%), Gaps = 3/293 (1%)
Query: 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYG 85
PL+ DP +A+I+ HE RQ + LI SENFTS +VM A+GSVM+NKYSEGYPGARYYG
Sbjct: 11 PLKEQDPTVAEIMRHEADRQRSSVVLIASENFTSRAVMDALGSVMSNKYSEGYPGARYYG 70
Query: 86 GNEYIDMAESLCQKRALEAFRLDPEKWG---GSLSGSPSNFQVYTALLKPHDRIMALDLP 142
GN++ID E+LCQ+RAL AF LDP KWG LSGSP+N QVY A++ PH R+M LDLP
Sbjct: 71 GNKFIDQIETLCQERALAAFNLDPAKWGVNVQCLSGSPANMQVYQAIMPPHGRLMGLDLP 130
Query: 143 HGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 202
GGHLSHGYQTDTKKISAVS +FE+MPYR++ +TG IDYD LE A LFRPK++VAG SA
Sbjct: 131 SGGHLSHGYQTDTKKISAVSTYFESMPYRVDPNTGLIDYDMLEHDAQLFRPKILVAGTSA 190
Query: 203 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG 262
Y RL DY R+R++ + A ++ DMAHISGLV+AGVIPSPFEYADVVTTTTHKSLRGPRG
Sbjct: 191 YCRLIDYARMRQIADSVNAYLVVDMAHISGLVSAGVIPSPFEYADVVTTTTHKSLRGPRG 250
Query: 263 AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315
AMIFFR+G+++ +K+G ++YD E+KIN +VFPG QGGPHNHTIT LAVALKQ
Sbjct: 251 AMIFFRRGLRKHDKKGNPIYYDLEDKINFSVFPGHQGGPHNHTITALAVALKQ 303
>sp|P50432|GLYC_CAEEL Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32
PE=1 SV=2
Length = 507
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 197/295 (66%), Positives = 240/295 (81%), Gaps = 3/295 (1%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
+E VDPE+ DI+++EK RQ +GLELI SENFTS +VM A+GS M NKYSEGYPGARYYGG
Sbjct: 52 VEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGG 111
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGGS---LSGSPSNFQVYTALLKPHDRIMALDLPH 143
NE+ID E LCQKRALE F LDP KWG + LSGSP+NF VYTA++ + RIM LDLP
Sbjct: 112 NEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMGLDLPD 171
Query: 144 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 203
GGHL+HG+ T +K+SA S FF+++PY+++ +TG IDYD+LE++A LFRPK I+AG S Y
Sbjct: 172 GGHLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCY 231
Query: 204 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 263
AR DYER RK+ K A +++DMAHISGLVAAG+IPSPFEY+DVVTTTTHKSLRGPRGA
Sbjct: 232 ARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGA 291
Query: 264 MIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
+IF+RKGV+ N +G + YD EEKIN AVFPGLQGGPHNHTI G+AVAL+Q +
Sbjct: 292 LIFYRKGVRSTNAKGVDTLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALRQCLS 346
>sp|O13426|GLYC_CANAL Serine hydroxymethyltransferase, cytosolic OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=SHM2 PE=1 SV=4
Length = 470
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 197/296 (66%), Positives = 239/296 (80%), Gaps = 4/296 (1%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L+ DPE+ II+ E RQ + LI SENFT+ +V A+G+ M NKYSEGYPGARYYGG
Sbjct: 18 LKDTDPEVDQIIKDEIDRQQHSIVLIASENFTTTAVFDALGTPMCNKYSEGYPGARYYGG 77
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWG---GSLSGSPSNFQVYTALLKPHDRIMALDLPH 143
NE+ID E LCQ+RAL+AF L P+KWG +LSGSP+N QVY A++KPH+R+M LDLPH
Sbjct: 78 NEHIDRMELLCQERALKAFGLTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLDLPH 137
Query: 144 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 203
GGHLSHGYQTD++KISAVS +FETMPYR++ TG IDYD LEK+A L+RPK++VAG SAY
Sbjct: 138 GGHLSHGYQTDSRKISAVSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAGTSAY 197
Query: 204 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 263
RL DY+R+R++ +K A ++ DMAHISGL+AAGVIPSPFEYAD+VTTTTHKSLRGPRGA
Sbjct: 198 CRLIDYKRMREIADKVGAYLVVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSLRGPRGA 257
Query: 264 MIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
MIFFR+GV+ +N K G+E+ YD E IN +VFPG QGGPHNHTI LA ALKQ T
Sbjct: 258 MIFFRRGVRSVNPKTGQEILYDLENPINFSVFPGHQGGPHNHTIAALATALKQANT 313
>sp|O13425|GLYM_CANAX Serine hydroxymethyltransferase, mitochondrial OS=Candida albicans
GN=SHM1 PE=3 SV=1
Length = 493
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/292 (67%), Positives = 237/292 (81%), Gaps = 4/292 (1%)
Query: 30 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 89
VDPE+ADI+ E+ RQ + LIPSENFTS +VM +GS M NKYSEGYPG RYYGGNE
Sbjct: 42 VDPEMADILNQERTRQKNSITLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGGNEI 101
Query: 90 IDMAESLCQKRALEAFRLDPEKWGGS---LSGSPSNFQVYTALLKPHDRIMALDLPHGGH 146
ID AE+LCQKRALEAF LDP +WG + LSG+P+N Y+A+L+ DRIM LDLPHGGH
Sbjct: 102 IDKAEALCQKRALEAFGLDPSQWGVNVQPLSGAPANLYAYSAILEVGDRIMGLDLPHGGH 161
Query: 147 LSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARL 206
LSHGYQT T KIS +S +F+TMPYRLNE TG IDYD LEK+A LFRPK+IVAGASAY+R+
Sbjct: 162 LSHGYQTKTTKISYISKYFQTMPYRLNEETGIIDYDTLEKNAQLFRPKVIVAGASAYSRV 221
Query: 207 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 266
DY+R+R++ + A +L+DMAHISGLV+A V SPF Y+D+VTTTTHKSLRGPRGAMIF
Sbjct: 222 IDYKRMRQLSIRLGAYLLSDMAHISGLVSAVVTDSPFPYSDIVTTTTHKSLRGPRGAMIF 281
Query: 267 FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
FRKG++++ +GKE+ Y+ E KIN VFPG QGGPHNHTI+ LAVALKQ CT
Sbjct: 282 FRKGIRKVTTKGKEIPYELERKINFLVFPGHQGGPHNHTISALAVALKQ-CT 332
>sp|P34897|GLYM_HUMAN Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens
GN=SHMT2 PE=1 SV=3
Length = 504
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 191/292 (65%), Positives = 237/292 (81%), Gaps = 4/292 (1%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 53 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 112
Query: 91 DMAESLCQKRALEAFRLDPEKWGGSL---SGSPSNFQVYTALLKPHDRIMALDLPHGGHL 147
D E LCQ+RALEAF LDP +WG ++ SGSP+N VYTALL+PHDRIM LDLP GGHL
Sbjct: 113 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHL 172
Query: 148 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 207
+HGY +D K+ISA SIFFE+MPY+LN TG IDY+QL +A LFRP+LI+AG SAYARL
Sbjct: 173 THGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLI 232
Query: 208 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 267
DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+LRG R +IF+
Sbjct: 233 DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFY 292
Query: 268 RKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
RKGVK ++ K G+E+ Y +E++IN AVFP LQGGPHNH I +AVALKQ CT
Sbjct: 293 RKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACT 344
>sp|Q6FUP6|GLYC_CANGA Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SHM2 PE=3 SV=1
Length = 469
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 194/302 (64%), Positives = 237/302 (78%), Gaps = 4/302 (1%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K ++ L DPE+ II+ E RQ ++LI SENFT+ SV A+G+ + NKYSEGYPG
Sbjct: 11 KMVSGHLSETDPEVEQIIKDEVDRQKHSIDLIASENFTTTSVFDALGTPLCNKYSEGYPG 70
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG---GSLSGSPSNFQVYTALLKPHDRIM 137
ARYYGGNE+ID E LCQ+RALEAF + P++WG +LSGSP+N QVY AL+KPH+R+M
Sbjct: 71 ARYYGGNEHIDRIERLCQQRALEAFHVTPDRWGVNVQTLSGSPANLQVYQALMKPHERLM 130
Query: 138 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 197
L LP GGHLSHGY T+ +KISAVS +FE+ PYR+N TG IDYD LEK+A L+RPK++V
Sbjct: 131 GLYLPDGGHLSHGYATENRKISAVSTYFESFPYRVNPETGIIDYDTLEKNAILYRPKILV 190
Query: 198 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 257
AG SAY RL DY+R+R++ +K A ++ DMAHISGLVAAGVIPSPFEYAD+VTTTTHKSL
Sbjct: 191 AGTSAYCRLIDYKRMREIADKCGAYLMVDMAHISGLVAAGVIPSPFEYADIVTTTTHKSL 250
Query: 258 RGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316
RGPRGAMIFFR+G++ +N K GKE+ YD E IN +VFPG QGGPHNHTI LA ALKQ
Sbjct: 251 RGPRGAMIFFRRGIRSVNQKTGKEIPYDLENPINFSVFPGHQGGPHNHTIAALATALKQA 310
Query: 317 CT 318
T
Sbjct: 311 AT 312
>sp|P37291|GLYC_YEAST Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SHM2 PE=1
SV=2
Length = 469
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/302 (64%), Positives = 238/302 (78%), Gaps = 4/302 (1%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K + + L DPE+ II+ E RQ ++LI SENFTS SV A+G+ ++NKYSEGYPG
Sbjct: 11 KLITSHLVDTDPEVDSIIKDEIERQKHSIDLIASENFTSTSVFDALGTPLSNKYSEGYPG 70
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG---GSLSGSPSNFQVYTALLKPHDRIM 137
ARYYGGNE+ID E LCQ+RAL+AF + P+KWG +LSGSP+N QVY A++KPH+R+M
Sbjct: 71 ARYYGGNEHIDRMEILCQQRALKAFHVTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLM 130
Query: 138 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 197
L LP GGHLSHGY T+ +KISAVS +FE+ PYR+N TG IDYD LEK+A L+RPK++V
Sbjct: 131 GLYLPDGGHLSHGYATENRKISAVSTYFESFPYRVNPETGIIDYDTLEKNAILYRPKVLV 190
Query: 198 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 257
AG SAY RL DY+R+R++ +K A ++ DMAHISGL+AAGVIPSPFEYAD+VTTTTHKSL
Sbjct: 191 AGTSAYCRLIDYKRMREIADKCGAYLMVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSL 250
Query: 258 RGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316
RGPRGAMIFFR+GV+ IN K GKEV YD E IN +VFPG QGGPHNHTI LA ALKQ
Sbjct: 251 RGPRGAMIFFRRGVRSINPKTGKEVLYDLENPINFSVFPGHQGGPHNHTIAALATALKQA 310
Query: 317 CT 318
T
Sbjct: 311 AT 312
>sp|Q75BQ6|GLYC_ASHGO Serine hydroxymethyltransferase, cytosolic OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=SHM2 PE=3 SV=2
Length = 469
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/302 (64%), Positives = 239/302 (79%), Gaps = 4/302 (1%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K +++ L DPE+ II+ E RQ + LI SEN TS +V A+G+ M NKYSEGYPG
Sbjct: 11 KLISSHLSESDPEVDAIIKDEIDRQKHSIVLIASENLTSTAVFDALGTPMCNKYSEGYPG 70
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG---GSLSGSPSNFQVYTALLKPHDRIM 137
ARYYGGN++ID E LCQ+RALEAF + P++WG SLSGSP+N QVY AL+KPH+R+M
Sbjct: 71 ARYYGGNQHIDRMELLCQRRALEAFHVTPDRWGVNVQSLSGSPANLQVYQALMKPHERLM 130
Query: 138 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 197
L LP GGHLSHGYQT+T+KISAVS +FE+ PYR++ TG IDYD LEK+A L+RPK++V
Sbjct: 131 GLHLPDGGHLSHGYQTETRKISAVSTYFESFPYRVDPETGIIDYDTLEKNAVLYRPKILV 190
Query: 198 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 257
AG SAY RL DY+R+R++ +K A ++ DMAHISGLVAAGVIPSPFEYAD+VTTTTHKSL
Sbjct: 191 AGTSAYCRLIDYKRMREIADKVGAYLMVDMAHISGLVAAGVIPSPFEYADIVTTTTHKSL 250
Query: 258 RGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316
RGPRGAMIFFR+GV+ ++ K G+EV YD E IN +VFPG QGGPHNHTI+ LA ALKQ
Sbjct: 251 RGPRGAMIFFRRGVRSVHPKTGEEVMYDLEGPINFSVFPGHQGGPHNHTISALATALKQA 310
Query: 317 CT 318
T
Sbjct: 311 TT 312
>sp|P34898|GLYC_NEUCR Serine hydroxymethyltransferase, cytosolic OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=for PE=3 SV=2
Length = 480
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/292 (66%), Positives = 233/292 (79%), Gaps = 4/292 (1%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DP++A+I++ E RQ + + LI SEN TS +V A+GS M+NKYSEG PGARYYGGN++I
Sbjct: 22 DPQVAEIMKKEVQRQRESIILIASENVTSRAVFDALGSPMSNKYSEGLPGARYYGGNQHI 81
Query: 91 DMAESLCQKRALEAFRLDPEKWG---GSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 147
D E LCQ RALEAF LDP++WG LSGSP+N QVY A++ H R+M LDLPHGGHL
Sbjct: 82 DEIEVLCQNRALEAFHLDPKQWGVNVQCLSGSPANLQVYQAIMPVHGRLMGLDLPHGGHL 141
Query: 148 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 207
SHGYQT +KISAVS +FETMPYR+N TG IDYD LEK+A LFRPK++VAG SAY RL
Sbjct: 142 SHGYQTPQRKISAVSTYFETMPYRVNIDTGLIDYDTLEKNAQLFRPKVLVAGTSAYCRLI 201
Query: 208 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 267
DYER+RK+ + A ++ DMAHISGL+A+ VIPSPF YADVVTTTTHKSLRGPRGAMIFF
Sbjct: 202 DYERMRKIADSVGAYLVVDMAHISGLIASEVIPSPFLYADVVTTTTHKSLRGPRGAMIFF 261
Query: 268 RKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
R+GV+ ++ K GKE YD E+KIN +VFPG QGGPHNHTIT LAVALKQ +
Sbjct: 262 RRGVRSVDAKTGKETLYDLEDKINFSVFPGHQGGPHNHTITALAVALKQAAS 313
>sp|Q3SZ20|GLYM_BOVIN Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus
GN=SHMT2 PE=2 SV=1
Length = 504
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/292 (64%), Positives = 235/292 (80%), Gaps = 4/292 (1%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ +++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 53 DPEMWELLRREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 112
Query: 91 DMAESLCQKRALEAFRLDPEKWGGSL---SGSPSNFQVYTALLKPHDRIMALDLPHGGHL 147
D E LCQ+RALEAF LDP +WG ++ SGSP+N YTALL+PHDRIM LDLP GGHL
Sbjct: 113 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHL 172
Query: 148 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 207
+HGY +D K+ISA SIFFE+MPY+LN TG IDYDQL +A LF+P+LI+AG SAYARL
Sbjct: 173 THGYMSDVKRISATSIFFESMPYKLNPQTGLIDYDQLALTARLFKPRLIIAGTSAYARLI 232
Query: 208 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 267
DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+LRG R +IF+
Sbjct: 233 DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFY 292
Query: 268 RKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
RKGV+ ++ K G+E+ Y +E++IN AVFP LQGGPHNH I +AVALKQ CT
Sbjct: 293 RKGVQAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACT 344
>sp|P14519|GLYM_RABIT Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus
cuniculus GN=SHMT2 PE=1 SV=2
Length = 504
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/296 (63%), Positives = 236/296 (79%), Gaps = 4/296 (1%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L DPE+ ++++ EK RQ +GLELI SENF + ++A+GS + NKYSEGYPG RYYGG
Sbjct: 49 LSDTDPEMWELLQREKDRQCRGLELIASENFCIRAALEALGSCLNNKYSEGYPGKRYYGG 108
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGGSL---SGSPSNFQVYTALLKPHDRIMALDLPH 143
E +D E LCQ+RALEAF LDP +WG ++ SGSP+N YTALL+PHDRIM LDLP
Sbjct: 109 AEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPD 168
Query: 144 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 203
GGHL+HGY +D K++SA SIFFE+MPY+LN TG IDY+QL +A LFRP+LI+AG SAY
Sbjct: 169 GGHLTHGYMSDVKRVSATSIFFESMPYKLNPQTGLIDYEQLALTARLFRPRLIIAGTSAY 228
Query: 204 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 263
ARL DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++ADVVTTTTHK+LRG R
Sbjct: 229 ARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADVVTTTTHKTLRGARSG 288
Query: 264 MIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
+IF+RKGV+ ++ K G+E+ Y +E++IN AVFP LQGGPHNH I +AVALKQ CT
Sbjct: 289 LIFYRKGVRTVDPKTGQEIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACT 344
>sp|Q758F0|GLYM_ASHGO Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=SHM1 PE=3 SV=1
Length = 497
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/300 (62%), Positives = 241/300 (80%), Gaps = 4/300 (1%)
Query: 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 82
L+ ++ DPE+ DI+ E++RQ + + LIPSENFTSV+VM +GS M NKYSEGYPG R
Sbjct: 36 LSQHVQEFDPEMYDILTKERSRQKRSITLIPSENFTSVAVMNLLGSEMQNKYSEGYPGQR 95
Query: 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWG---GSLSGSPSNFQVYTALLKPHDRIMAL 139
YYGGN+YIDMAESLCQKRALE + LDP KWG SLSG+P+N Y+A+++ DR+M L
Sbjct: 96 YYGGNQYIDMAESLCQKRALELYGLDPAKWGVNVQSLSGAPANLYAYSAIMEVGDRMMGL 155
Query: 140 DLPHGGHLSHGYQ-TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 198
DLPHGGHLSHGYQ + KIS +S +F+TM YR++ +TG +DYD L +++ LFRPK+IVA
Sbjct: 156 DLPHGGHLSHGYQLQNGNKISYISKYFQTMAYRVDPATGLVDYDTLSETSKLFRPKVIVA 215
Query: 199 GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR 258
G SAYAR+ DY+R R++ + A +L+DMAH+SGLVAAGV PSPFEY+D+VTTTTHKSLR
Sbjct: 216 GTSAYARVLDYKRFREIADACGAYLLSDMAHVSGLVAAGVHPSPFEYSDIVTTTTHKSLR 275
Query: 259 GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
GPRGAMIF+RKG++++ K+G E+ YD +++IN +VFP QGGPHNHTI+ LAVALKQ T
Sbjct: 276 GPRGAMIFYRKGIRKVTKKGTEIMYDLDKRINFSVFPAHQGGPHNHTISALAVALKQAAT 335
>sp|Q7S5N8|GLYM_NEUCR Putative serine hydroxymethyltransferase, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU05805 PE=3 SV=1
Length = 527
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 186/273 (68%), Positives = 226/273 (82%), Gaps = 3/273 (1%)
Query: 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD 108
+ LIPSENFTS +V+ A+GS M NKYSEGYPGARYYGGNE+ID +E LCQ RALE F LD
Sbjct: 77 INLIPSENFTSQAVLDALGSPMQNKYSEGYPGARYYGGNEFIDASERLCQDRALETFGLD 136
Query: 109 PEKWG---GSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 165
P++WG +LSG+P+N VY+AL+ HDR+M LDLPHGGHLSHGYQT TKKIS +S +F
Sbjct: 137 PKEWGVNVQALSGAPANLYVYSALMDTHDRLMGLDLPHGGHLSHGYQTPTKKISFISKYF 196
Query: 166 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225
ET+PYRL+E TGYIDY++LE+ A +RPK+IVAGASAY+RL DY R+R++C+K A ++A
Sbjct: 197 ETLPYRLDEKTGYIDYNKLEELAITYRPKIIVAGASAYSRLIDYARLREICDKVNAYLMA 256
Query: 226 DMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDY 285
DMAHISGLVAA V+P PF +AD+VTTT+HKSLRGPRGAMIFFR+GV+ NK+G+E Y+
Sbjct: 257 DMAHISGLVAAKVMPGPFTHADIVTTTSHKSLRGPRGAMIFFRRGVRRTNKKGEEELYNL 316
Query: 286 EEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
E IN +VFPG QGGPHNHTI LAVALKQ T
Sbjct: 317 ETPINASVFPGHQGGPHNHTIAALAVALKQAQT 349
>sp|Q6CLQ5|GLYM_KLULA Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=SHM1 PE=3 SV=1
Length = 498
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/293 (63%), Positives = 237/293 (80%), Gaps = 4/293 (1%)
Query: 30 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 89
+DPE+ DI+ E+ RQ + LIPSENFTS SVM +GS M NKYSEGYPG RYYGGN++
Sbjct: 44 IDPEMYDILTKERKRQKHSITLIPSENFTSKSVMDLLGSEMQNKYSEGYPGERYYGGNQF 103
Query: 90 IDMAESLCQKRALEAFRLDPEKWGGS---LSGSPSNFQVYTALLKPHDRIMALDLPHGGH 146
IDMAESLCQKRALE + LDP+ WG + LSG+P+N Y+A+++ +DR+M LDLPHGGH
Sbjct: 104 IDMAESLCQKRALELYNLDPQLWGVNVQPLSGAPANLYAYSAVMETNDRLMGLDLPHGGH 163
Query: 147 LSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYAR 205
LSHGYQ + KIS +S +F+TMPY ++ TG IDYD L K++ LFRPK+IVAGASAY+R
Sbjct: 164 LSHGYQLPSGTKISYISKYFQTMPYHVDSQTGIIDYDFLSKTSKLFRPKVIVAGASAYSR 223
Query: 206 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 265
+ DY+R +++ + A +++DMAHISGLVAAGV SPFEY+D+VTTTTHKSLRGPRGAMI
Sbjct: 224 VLDYKRFKEIADACGAYLMSDMAHISGLVAAGVTRSPFEYSDIVTTTTHKSLRGPRGAMI 283
Query: 266 FFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
F+RKGV+++ K+GKEV YD +++IN +VFPG QGGPHNHTI+ LAVALKQ T
Sbjct: 284 FYRKGVRKVTKKGKEVLYDLDKRINFSVFPGHQGGPHNHTISALAVALKQAAT 336
>sp|P35623|GLYC_SHEEP Serine hydroxymethyltransferase, cytosolic OS=Ovis aries GN=SHMT1
PE=1 SV=3
Length = 484
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/302 (63%), Positives = 234/302 (77%), Gaps = 4/302 (1%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG
Sbjct: 20 KMLAQPLKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSL---SGSPSNFQVYTALLKPHDRIM 137
RYYGG E+ID E LCQKRAL+ + LDPE WG ++ SGSP+NF VYTAL++PH RIM
Sbjct: 80 QRYYGGTEFIDELEVLCQKRALQVYGLDPECWGVNVQPYSGSPANFAVYTALVEPHGRIM 139
Query: 138 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 197
LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQLE++A LF P+LI+
Sbjct: 140 GLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPRLII 199
Query: 198 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 257
AG S Y+R DY R+RK+ + A ++ADMAHISGLVAAGV+PSPFE+ VV+TTTHK+L
Sbjct: 200 AGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHCHVVSTTTHKTL 259
Query: 258 RGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316
RG R MIF+RKGV+ ++ K GKE Y+ E IN AVFPGLQGGPHNH I G+AVALKQ
Sbjct: 260 RGCRAGMIFYRKGVRSVDPKTGKETRYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQA 319
Query: 317 CT 318
T
Sbjct: 320 MT 321
>sp|Q5E9P9|GLYC_BOVIN Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1
PE=2 SV=3
Length = 484
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/302 (61%), Positives = 233/302 (77%), Gaps = 4/302 (1%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG
Sbjct: 20 KMLAQPLKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSL---SGSPSNFQVYTALLKPHDRIM 137
RYYGG E+ID E LCQKRAL+ + LD + WG ++ SGSP+NF VYTAL++PH RIM
Sbjct: 80 QRYYGGTEFIDELEVLCQKRALQVYGLDSQCWGVNVQPYSGSPANFAVYTALVEPHGRIM 139
Query: 138 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 197
LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQLE++A LF P+LI+
Sbjct: 140 GLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPRLII 199
Query: 198 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 257
AG S Y+R DY R+RK+ + A ++ADMAH+SGLVAAGV+PSPFE+ VV+TTTHK+L
Sbjct: 200 AGTSCYSRNLDYARLRKIADDNGAYLMADMAHVSGLVAAGVVPSPFEHCHVVSTTTHKTL 259
Query: 258 RGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316
RG R MIF+RKGV+ ++ K G+E Y+ E IN AVFPGLQGGPHNH I G+AVALKQ
Sbjct: 260 RGCRAGMIFYRKGVRSVDPKTGRETRYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQA 319
Query: 317 CT 318
T
Sbjct: 320 MT 321
>sp|Q54Z26|GLYC1_DICDI Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum
GN=shmt1 PE=1 SV=1
Length = 457
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/296 (63%), Positives = 237/296 (80%), Gaps = 6/296 (2%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
N PL+ VD EI +++ EK RQ+KGLELI SENFTS +VM+A+GS TNKY+EGYPG+RY
Sbjct: 7 NTPLKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSRY 66
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGGSL---SGSPSNFQVYTALLKPHDRIMALD 140
YGG E +D E+LCQKRAL+AFRLD KWG ++ SGSP+NF VYTALL+PHDRIM LD
Sbjct: 67 YGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMGLD 126
Query: 141 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 200
LP GGHL+HGYQTD KKISA SIFFE+MPY++ + G IDY +LE++A LF+PKLI++GA
Sbjct: 127 LPSGGHLTHGYQTDKKKISASSIFFESMPYQIG-ADGLIDYQRLEENALLFKPKLIISGA 185
Query: 201 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 260
SAY R +DY+R+R + +K A ++ DMAH SGLVAA ++ SPF+Y DVVT+TTHK+LRGP
Sbjct: 186 SAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHKTLRGP 245
Query: 261 RGAMIFFRKGVKEINKQGKEV-FYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315
R +IFFR+G K ++ GKE+ YD E KIN AVFP LQGGPH + I G+AVALK+
Sbjct: 246 RSGIIFFRRG-KRVDGNGKEIEEYDIESKINFAVFPSLQGGPHENVIAGVAVALKE 300
>sp|P34896|GLYC_HUMAN Serine hydroxymethyltransferase, cytosolic OS=Homo sapiens GN=SHMT1
PE=1 SV=1
Length = 483
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/303 (64%), Positives = 240/303 (79%), Gaps = 4/303 (1%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSL---SGSPSNFQVYTALLKPHDRIM 137
RYYGG E+ID E+LCQKRAL+A++LDP+ WG ++ SGSP+NF VYTAL++PH RIM
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIM 139
Query: 138 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 197
LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQLE++A LF PKLI+
Sbjct: 140 GLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLII 199
Query: 198 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 257
AG S Y+R +Y R+RK+ ++ A ++ADMAHISGLVAAGV+PSPFE+ VVTTTTHK+L
Sbjct: 200 AGTSCYSRNLEYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTL 259
Query: 258 RGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316
RG R MIF+RKGVK ++ K GKE+ Y+ E IN AVFPGLQGGPHNH I G+AVALKQ
Sbjct: 260 RGCRAGMIFYRKGVKSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQA 319
Query: 317 CTL 319
TL
Sbjct: 320 MTL 322
>sp|P50431|GLYC_MOUSE Serine hydroxymethyltransferase, cytosolic OS=Mus musculus GN=Shmt1
PE=1 SV=3
Length = 478
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/327 (59%), Positives = 245/327 (74%), Gaps = 11/327 (3%)
Query: 13 EKNGVTWP---KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSV 69
+++ W K L+ PL+ D E+ II+ E RQ GLELI SENF S +V++A+GS
Sbjct: 3 DRDATLWASHEKMLSQPLKDSDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSC 62
Query: 70 MTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSL---SGSPSNFQVY 126
+ NKYSEGYPG RYYGG E+ID E LCQKRAL+A+ LDP+ WG ++ SGSP+NF VY
Sbjct: 63 LNNKYSEGYPGQRYYGGTEFIDELEMLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVY 122
Query: 127 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK 186
TAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++ TGYI+YDQLE+
Sbjct: 123 TALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVYPETGYINYDQLEE 182
Query: 187 SATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYA 246
+A+LF PKLI+AG S Y+R DY R+RK+ + A ++ADMAHISGLVAAGV+PSPFE+
Sbjct: 183 NASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHC 242
Query: 247 DVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHT 305
VVTTTTHK+LRG R MIF+RKGV+ ++ K GKE +Y+ E IN AVFPGLQGGPHNH
Sbjct: 243 HVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGKETYYELESLINSAVFPGLQGGPHNHA 302
Query: 306 ITGLAVALKQVCTLITFSHIHVFSLHV 332
I G+AVALKQ T + ++ L V
Sbjct: 303 IAGVAVALKQAMT----TEFKIYQLQV 325
>sp|Q5RFK5|GLYC_PONAB Serine hydroxymethyltransferase, cytosolic OS=Pongo abelii GN=SHMT1
PE=2 SV=1
Length = 483
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/303 (63%), Positives = 238/303 (78%), Gaps = 4/303 (1%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL+ D E+ +II+ E RQ GLEL SENF S +V++A+GS + NKYSEGYPG
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELFASENFASQAVLEALGSCLNNKYSEGYPG 79
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSL---SGSPSNFQVYTALLKPHDRIM 137
RYYGG E+ID E+LCQKRAL+A++LDP+ WG ++ SGSP+NF VYTAL++PH RIM
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIM 139
Query: 138 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 197
LDLP GGHL+HG+ T KKISA SIFFE+MPY++N TGYI+YDQLE++A LF PKLI+
Sbjct: 140 GLDLPDGGHLTHGFMTGKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLII 199
Query: 198 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 257
AG S Y+R DY R+RK+ ++ A ++ADMAHISGLVAAGV+PSPFE+ VVTTTTHK+L
Sbjct: 200 AGTSCYSRNLDYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTL 259
Query: 258 RGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316
RG R MIF+RKGV+ ++ K GKE+ Y+ E IN AVFPGLQGGPHNH I G+AVALKQ
Sbjct: 260 RGCRAGMIFYRKGVQSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQA 319
Query: 317 CTL 319
TL
Sbjct: 320 MTL 322
>sp|P07511|GLYC_RABIT Serine hydroxymethyltransferase, cytosolic OS=Oryctolagus cuniculus
GN=SHMT1 PE=1 SV=2
Length = 484
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/318 (60%), Positives = 241/318 (75%), Gaps = 7/318 (2%)
Query: 8 AVYEKEKNGVTWP---KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQ 64
AV ++ W + L PL+ D E+ DII+ E RQ GLELI SENF S +V++
Sbjct: 4 AVNGAPRDAALWSSHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLE 63
Query: 65 AVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSL---SGSPS 121
A+GS + NKYSEGYPG RYYGG E+ID E+LCQKRAL+A+ LDP+ WG ++ SGSP+
Sbjct: 64 ALGSCLNNKYSEGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPA 123
Query: 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 181
NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+M Y++N TGYIDY
Sbjct: 124 NFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDY 183
Query: 182 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 241
D+LE++A LF PKLI+AG S Y+R DY R+RK+ ++ A ++ADMAHISGLV AGV+PS
Sbjct: 184 DRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPS 243
Query: 242 PFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGG 300
PFE+ VVTTTTHK+LRG R MIF+R+GV+ ++ K GKE+ Y+ E IN AVFPGLQGG
Sbjct: 244 PFEHCHVVTTTTHKTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGG 303
Query: 301 PHNHTITGLAVALKQVCT 318
PHNH I G+AVALKQ T
Sbjct: 304 PHNHAIAGVAVALKQAMT 321
>sp|Q54EW1|GLYC2_DICDI Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum
GN=shmt2 PE=3 SV=1
Length = 481
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/298 (61%), Positives = 228/298 (76%), Gaps = 5/298 (1%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
N + DPEI D++ EK RQ+ GLELI SENFTS +VM+++GS TNKY+EG PGARY
Sbjct: 31 NRSVSESDPEIYDLMMKEKQRQFTGLELIASENFTSRAVMESIGSCFTNKYAEGLPGARY 90
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGGSL---SGSPSNFQVYTALLKPHDRIMALD 140
YGGNE +D E+LC KRALE F L+PE+WG ++ SGS +NF +T LLKPHDRIM LD
Sbjct: 91 YGGNEVVDQLENLCIKRALETFNLNPEEWGVNVQPYSGSTANFAAFTGLLKPHDRIMGLD 150
Query: 141 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 200
LP GGHL+HGYQTD KKISA SIFFE+MPY++NE TGY+DY+++E +A LFRPKL++AGA
Sbjct: 151 LPSGGHLTHGYQTDKKKISATSIFFESMPYQVNE-TGYVDYNKMEANAALFRPKLLIAGA 209
Query: 201 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 260
SAY R +DYER+RK+ +K A +L DMAHISG+VA SPF + DVVTTTTHK+LRGP
Sbjct: 210 SAYPREWDYERMRKIADKHGAYLLCDMAHISGMVAGKQAISPFLFCDVVTTTTHKTLRGP 269
Query: 261 RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
R +IFFRK K + +G + D E +IN AVFP QGGPH +TI G+AVALK+ +
Sbjct: 270 RAGLIFFRK-TKRRDAKGNIIDDDLENRINFAVFPSCQGGPHENTIAGIAVALKEASS 326
>sp|Q6FQ44|GLYM_CANGA Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SHM1 PE=3 SV=1
Length = 485
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/297 (61%), Positives = 231/297 (77%), Gaps = 5/297 (1%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
++ VDPE+ I+ E++RQ + LIPSENFTS +VM +GS M NKYSEGYPG RYYGG
Sbjct: 27 VQEVDPEMFRILSDERSRQKHSVTLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGG 86
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWG---GSLSGSPSNFQVYTALLKPHDRIMALDLPH 143
N++ID AESLCQ RAL+ + LDPEKWG +LSG+P+N Y+A+++ DR+M LDLPH
Sbjct: 87 NQFIDKAESLCQARALDLYGLDPEKWGVNVQALSGAPANLYAYSAVMEVGDRLMGLDLPH 146
Query: 144 GGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 202
GGHLSHGYQ + KIS +S +F TMPY +N TG IDYD L ++ LFRPK+IVAG SA
Sbjct: 147 GGHLSHGYQLPSGTKISYISKYFNTMPYHVNTETGIIDYDTLAMTSKLFRPKVIVAGTSA 206
Query: 203 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG 262
Y+R DY R RK+ + A +L+DMAHISGLVAA VI SPFE++D+VTTTTHKSLRGPRG
Sbjct: 207 YSRKLDYARFRKIADGCGAYLLSDMAHISGLVAANVIDSPFEHSDIVTTTTHKSLRGPRG 266
Query: 263 AMIFFRKGVKEINKQ-GKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
AMIF+RKG+K++NK+ GKE + +++ IN +VFPG QGGPHNHTI+ LAVALKQ T
Sbjct: 267 AMIFYRKGIKKVNKKTGKETPFTFDKTINFSVFPGHQGGPHNHTISALAVALKQAKT 323
>sp|P37292|GLYM_YEAST Serine hydroxymethyltransferase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SHM1 PE=1
SV=2
Length = 490
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/300 (59%), Positives = 230/300 (76%), Gaps = 4/300 (1%)
Query: 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 82
++ P+ DPE+ DI++ E+ RQ + LIPSENFTS +VM +GS + NKYSEGYPG R
Sbjct: 29 VSKPVSEGDPEMFDILQQERHRQKHSITLIPSENFTSKAVMDLLGSELQNKYSEGYPGER 88
Query: 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGGS---LSGSPSNFQVYTALLKPHDRIMAL 139
YYGGNE ID +ESLCQ RALE + LDP KWG + LSG+P+N VY+A++ +R+M L
Sbjct: 89 YYGGNEIIDKSESLCQARALELYGLDPAKWGVNVQPLSGAPANLYVYSAIMNVGERLMGL 148
Query: 140 DLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 198
DLP GGHLSHGYQ + IS +S +F++MPY ++ +TG IDYD L+ A FRPK+IVA
Sbjct: 149 DLPDGGHLSHGYQLKSGTPISFISKYFQSMPYHVDHTTGLIDYDNLQVLAKAFRPKVIVA 208
Query: 199 GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR 258
G SAY+RL DY R +++ A +++DMAHISGLVAA V+PSPFE++D+VTTTTHKSLR
Sbjct: 209 GTSAYSRLIDYARFKEISQGCGAYLMSDMAHISGLVAANVVPSPFEHSDIVTTTTHKSLR 268
Query: 259 GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
GPRGAMIFFRKG+K + K+GKE+ Y+ E+KIN +VFPG QGGPHNHTI +AVALKQ +
Sbjct: 269 GPRGAMIFFRKGIKSVTKKGKEIPYELEKKINFSVFPGHQGGPHNHTIGAMAVALKQAMS 328
>sp|O62585|GLYC_ENCCU Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=SHMT-1 PE=3 SV=2
Length = 460
Score = 322 bits (824), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/298 (53%), Positives = 210/298 (70%), Gaps = 9/298 (3%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
PLE+ DPE+ +I E RQ K + LI SEN+ S M+A GSV+TNKYSEG G RY
Sbjct: 11 TGPLEMADPELHALICGEVERQKKTINLIASENYAHQSAMEACGSVLTNKYSEGRVGERY 70
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGGSL---SGSPSNFQVYTALLKPHDRIMALD 140
YGG ++D E LCQKRALE F LDP+ WG ++ SGSP+NF +YTA++ P RIM LD
Sbjct: 71 YGGTHWVDRIELLCQKRALELFGLDPDVWGVNVQPYSGSPANFAIYTAVVPPGGRIMGLD 130
Query: 141 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 200
LP GGHL+HGY+T T+KISA S++F++ PY + S G IDY+ LEK+ T F P +++ G
Sbjct: 131 LPSGGHLTHGYKTKTRKISASSVYFDSRPYTVG-SNGLIDYEGLEKTFTDFLPHILICGY 189
Query: 201 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 260
SAY+R DY+R++ + + A + AD++HIS LVA+G++ SPFE+ D+V TTT K LRGP
Sbjct: 190 SAYSRDIDYKRLQSIAGRNGAFLFADISHISPLVASGLMNSPFEHCDIVMTTTQKGLRGP 249
Query: 261 RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
RGA+IF+R+ V K G+ V D + +IN AVFP LQGGPHNHTI G+A AL T
Sbjct: 250 RGALIFYRRAV---TKNGETV--DLDARINFAVFPMLQGGPHNHTIAGIASALLHAGT 302
>sp|Q6AM21|GLYA_DESPS Serine hydroxymethyltransferase OS=Desulfotalea psychrophila
(strain LSv54 / DSM 12343) GN=glyA PE=3 SV=1
Length = 425
Score = 272 bits (696), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/295 (46%), Positives = 190/295 (64%), Gaps = 27/295 (9%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L+ DPEI +I+ E+ RQ + LI SEN+ S +V++A GS++TNKYSEGYPG RYY G
Sbjct: 13 LQQQDPEIFSLIQQEEVRQHNKIRLIASENYVSSAVLEATGSILTNKYSEGYPGKRYYEG 72
Query: 87 NEYIDMAESLCQKRALEAF---RLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPH 143
+ ID ES+ RA F ++ + + SGSP+N VY A LKP D I+ + LPH
Sbjct: 73 QQLIDQIESIAIDRAKAVFGAEHVNVQPY----SGSPANMAVYLAFLKPGDTILGMALPH 128
Query: 144 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 203
GGHL+HG K+S +F + Y LNE G +DY+++ A +PK+++AG SAY
Sbjct: 129 GGHLTHG-----SKVSISGKYFNAVSYALNEE-GILDYEEIRNKALECKPKILIAGHSAY 182
Query: 204 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 263
R+ D+ + R++ ++ A+++ DMAH +GLVA GV PSPF YADVVTTTTHKSLRGPRGA
Sbjct: 183 PRILDFAKFREIADEVGALLMVDMAHFAGLVAGGVHPSPFPYADVVTTTTHKSLRGPRGA 242
Query: 264 MIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
MI + +Y + I++AVFPG+QGGPH+ T +AVALK+ T
Sbjct: 243 MIMCKA--------------EYAKAIDKAVFPGMQGGPHDSTTAAIAVALKEAST 283
>sp|B8FJ72|GLYA_DESAA Serine hydroxymethyltransferase OS=Desulfatibacillum alkenivorans
(strain AK-01) GN=glyA PE=3 SV=1
Length = 413
Score = 272 bits (695), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/289 (50%), Positives = 181/289 (62%), Gaps = 20/289 (6%)
Query: 30 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 89
VDPE A IE E RQ LELI SEN S +VM A GSVMTNKY+EGYPG RYYGG E+
Sbjct: 9 VDPEAAKAIEQELDRQQFTLELIASENIASPAVMAAQGSVMTNKYAEGYPGHRYYGGCEF 68
Query: 90 IDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSH 149
+D+AE+L + RA E F+ D SGS +N VY ALL+P D ++ +DL HGGHL+H
Sbjct: 69 VDVAENLARDRAKELFQADYANVQPH-SGSQANMGVYFALLEPGDTVLGMDLSHGGHLTH 127
Query: 150 GYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 209
G +S F + Y + E TG IDYDQL A +PKLIVAGASAY R+ D+
Sbjct: 128 G-----SPVSFSGRIFNFIHYGVKEKTGTIDYDQLRSLAKEHKPKLIVAGASAYPRIIDF 182
Query: 210 ERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 269
+ K+ + A ++ DMAHI+GLVAAG PSP YADVVTTTTHK+LRGPRG MI K
Sbjct: 183 PELEKIARETGAYLMVDMAHIAGLVAAGEHPSPLPYADVVTTTTHKTLRGPRGGMILSNK 242
Query: 270 GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
G + +K++ +FPG+QGGP H I AVA K+ T
Sbjct: 243 G--------------FGKKLSSQIFPGIQGGPLMHVIAAKAVAFKEALT 277
>sp|B0K631|GLYA_THEPX Serine hydroxymethyltransferase OS=Thermoanaerobacter sp. (strain
X514) GN=glyA PE=3 SV=1
Length = 413
Score = 271 bits (692), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 139/288 (48%), Positives = 187/288 (64%), Gaps = 20/288 (6%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPEIAD IE E RQ +ELI SENF S +VM+A+GS +TNKY+EGYP RYYGG EY+
Sbjct: 10 DPEIADAIEKELIRQRNKIELIASENFVSRAVMEAMGSPLTNKYAEGYPNKRYYGGCEYV 69
Query: 91 DMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHG 150
D+AE L ++R + F + SG+ +N Y AL+KP D ++ +DL HGGHL+HG
Sbjct: 70 DIAEELARERLKKLFGAEHANVQPH-SGAQANMAAYFALIKPGDTVLGMDLAHGGHLTHG 128
Query: 151 YQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYE 210
K++ + + Y + E TGYIDYD++E+ A +PKLIVAGASAY R+ D++
Sbjct: 129 -----SKVNFSGQIYNFVSYGVREDTGYIDYDEVERVAKKHKPKLIVAGASAYPRIIDFK 183
Query: 211 RIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 270
R R++ +K A ++ DMAHI+GLVAAG+ P+P YADVVTTTTHK+LRGPRG I ++
Sbjct: 184 RFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGAILCKE- 242
Query: 271 VKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
+Y + I++A+FPG QGGP H I AV K+ T
Sbjct: 243 -------------EYAKAIDKALFPGTQGGPLMHIIAAKAVCFKEALT 277
>sp|B0K742|GLYA_THEP3 Serine hydroxymethyltransferase OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=glyA PE=3
SV=1
Length = 413
Score = 271 bits (692), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 139/288 (48%), Positives = 187/288 (64%), Gaps = 20/288 (6%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPEIAD IE E RQ +ELI SENF S +VM+A+GS +TNKY+EGYP RYYGG EY+
Sbjct: 10 DPEIADAIEKELIRQRNKIELIASENFVSRAVMEAMGSPLTNKYAEGYPNKRYYGGCEYV 69
Query: 91 DMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHG 150
D+AE L ++R + F + SG+ +N Y AL+KP D ++ +DL HGGHL+HG
Sbjct: 70 DIAEELARERLKKLFGAEHANVQPH-SGAQANMAAYFALIKPGDTVLGMDLAHGGHLTHG 128
Query: 151 YQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYE 210
K++ + + Y + E TGYIDYD++E+ A +PKLIVAGASAY R+ D++
Sbjct: 129 -----SKVNFSGQIYNFVSYGVREDTGYIDYDEVERVAKKHKPKLIVAGASAYPRIIDFK 183
Query: 211 RIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 270
R R++ +K A ++ DMAHI+GLVAAG+ P+P YADVVTTTTHK+LRGPRG I ++
Sbjct: 184 RFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGAILCKE- 242
Query: 271 VKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
+Y + I++A+FPG QGGP H I AV K+ T
Sbjct: 243 -------------EYAKAIDKALFPGTQGGPLMHIIAAKAVCFKEALT 277
>sp|Q74CR5|GLYA_GEOSL Serine hydroxymethyltransferase OS=Geobacter sulfurreducens (strain
ATCC 51573 / DSM 12127 / PCA) GN=glyA PE=3 SV=1
Length = 415
Score = 267 bits (682), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/289 (47%), Positives = 186/289 (64%), Gaps = 20/289 (6%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
LE DP++A+ I HE RQ LELI SENF S +V++A GSVMTNKY+EGYPG RYYGG
Sbjct: 4 LETFDPQVAEAIRHETERQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRYYGG 63
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGH 146
++D+ E+L +RA E F D SGS +N VY ++LKP D I+ ++L HGGH
Sbjct: 64 CHHVDVVENLAIERAKELFGADHANVQPH-SGSQANMAVYFSVLKPGDTILGMNLSHGGH 122
Query: 147 LSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARL 206
L+HG ++ FF +PY +++ T ID++++E+ A +PK+IV GASAY R
Sbjct: 123 LTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKMIVVGASAYPRT 177
Query: 207 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 266
D+ R + +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI
Sbjct: 178 IDFAAFRIIADKVGAVIMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMIL 237
Query: 267 FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315
R+ +Y + +N +FPG+QGGP H I AVALK+
Sbjct: 238 CRE--------------EYAKTLNSNIFPGIQGGPLMHVIAAKAVALKE 272
>sp|Q8R887|GLYA_THETN Serine hydroxymethyltransferase OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=glyA PE=3 SV=1
Length = 413
Score = 266 bits (681), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/288 (47%), Positives = 187/288 (64%), Gaps = 20/288 (6%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPEIA++I E RQ +ELI SENF S +VM+A+G+ +TNKY+EGYPG RYYGG EY+
Sbjct: 10 DPEIAEVILKELNRQRNKIELIASENFVSRAVMEAMGTPLTNKYAEGYPGRRYYGGCEYV 69
Query: 91 DMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHG 150
DMAE L ++R + F + SG+ +N Y ALLKP D ++ +DL HGGHL+HG
Sbjct: 70 DMAEELARERLKKLFGAEHANVQPH-SGAQANMAAYFALLKPGDTVLGMDLAHGGHLTHG 128
Query: 151 YQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYE 210
K++ + + Y + E TGYIDYDQ+E A +PKLIVAGASAY R+ D++
Sbjct: 129 -----SKVNFSGQIYNFVSYGVREDTGYIDYDQVEDLAKKHKPKLIVAGASAYPRIIDFK 183
Query: 211 RIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 270
+ R++ +K A ++ DMAHI+GLVAAG+ P+P YADVVTTTTHK+LRGPRG I ++
Sbjct: 184 KFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGAILCKQ- 242
Query: 271 VKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
++ + I++A+FPG QGGP H I AV K+ +
Sbjct: 243 -------------EHAKAIDKALFPGTQGGPLMHIIAAKAVCFKEALS 277
>sp|A0LV49|GLYA_ACIC1 Serine hydroxymethyltransferase OS=Acidothermus cellulolyticus
(strain ATCC 43068 / 11B) GN=glyA PE=3 SV=1
Length = 427
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/289 (45%), Positives = 187/289 (64%), Gaps = 20/289 (6%)
Query: 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYY 84
A L DP IAD+I E+ RQ + + LIPSEN+ S +V++A G+V+TNKYSEGYP RYY
Sbjct: 9 AALTATDPTIADLIRAEERRQSEKIRLIPSENYVSKAVLEATGTVLTNKYSEGYPNRRYY 68
Query: 85 GGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHG 144
G ++ID E++ +RA + F +D SGSP+N +Y ALL P D +M + LP G
Sbjct: 69 EGQQFIDQIETIAIERAKQLFGVDHANVQ-PYSGSPANLAIYLALLSPGDTVMGMALPMG 127
Query: 145 GHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYA 204
GHL+HG+ +SA I+F ++ Y + TG ID+D++ + A RPK+I AG +A
Sbjct: 128 GHLTHGW-----PVSATGIWFRSVQYGVRRDTGRIDFDEVREVARRERPKVIFAGGTAIP 182
Query: 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAM 264
R+ D+ ++ + A+++AD+AHISGLVA GV PSP +AD+++TTTHK+LRGPRGAM
Sbjct: 183 RIIDFAAFAEIAREVNAVLVADIAHISGLVAGGVHPSPVGHADIISTTTHKTLRGPRGAM 242
Query: 265 IFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVAL 313
+ + Y + +++AVFPGLQGGPHNHT +AVAL
Sbjct: 243 LMSTE--------------QYAKALDKAVFPGLQGGPHNHTTAAIAVAL 277
>sp|Q1LU81|GLYA_BAUCH Serine hydroxymethyltransferase OS=Baumannia cicadellinicola subsp.
Homalodisca coagulata GN=glyA PE=3 SV=1
Length = 417
Score = 265 bits (678), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 141/285 (49%), Positives = 185/285 (64%), Gaps = 18/285 (6%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
D + IE E RQ + +ELI SEN+TS VMQA GS++TNKY+EGY G RYYGG Y+
Sbjct: 12 DTALWKAIELEAKRQEEHIELIASENYTSPRVMQAQGSILTNKYAEGYSGKRYYGGCVYV 71
Query: 91 DMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHG 150
D E+L RA F D SGS +NF VYTALLKP D I+ ++L HGGHL+HG
Sbjct: 72 DQVETLAIDRAKALFECDYANVQPH-SGSQANFAVYTALLKPGDTILGMNLAHGGHLTHG 130
Query: 151 YQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYE 210
++ + + Y +N++ GYIDY+QL K AT+ +PK+I+ G SAY+R+ D++
Sbjct: 131 -----ASVNFSGKMYNVISYGVNKN-GYIDYEQLNKLATMHKPKMIIGGFSAYSRVVDWD 184
Query: 211 RIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 270
+R+V + KA + DMAHI+GLVAAGV P+P YADVVTTTTHK+L GPRG +I + G
Sbjct: 185 IMRQVADSIKAFLFVDMAHIAGLVAAGVYPNPVPYADVVTTTTHKTLAGPRGGLILAQGG 244
Query: 271 VKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315
KE+ K K++ AVFPG QGGP H I G A+ALK+
Sbjct: 245 SKEMYK-----------KLDSAVFPGAQGGPLMHVIAGKAIALKE 278
>sp|Q39V87|GLYA_GEOMG Serine hydroxymethyltransferase OS=Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210) GN=glyA PE=3 SV=1
Length = 415
Score = 265 bits (677), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 136/289 (47%), Positives = 185/289 (64%), Gaps = 20/289 (6%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
LE DP +A+ I HE RQ LELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG
Sbjct: 4 LETFDPAVAEAIRHETERQEYNLELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGG 63
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGH 146
++D+ E+L +RA E F D SGS +N VY ++LKP D I+ ++L HGGH
Sbjct: 64 CHHVDVVENLAIERAKELFGADHANVQPH-SGSQANMAVYFSVLKPGDTILGMNLSHGGH 122
Query: 147 LSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARL 206
L+HG ++ FF +PY +++ T ID++++E+ A +PKLIV GASAY R+
Sbjct: 123 LTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKLIVVGASAYPRV 177
Query: 207 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 266
D+ R + +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI
Sbjct: 178 LDFAAFRAIADKVGALVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMIL 237
Query: 267 FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315
R+ ++ + +N +FPG+QGGP H I AVA K+
Sbjct: 238 CRE--------------EFAKTLNSNIFPGIQGGPLMHVIAAKAVAFKE 272
>sp|A6Q478|GLYA_NITSB Serine hydroxymethyltransferase OS=Nitratiruptor sp. (strain
SB155-2) GN=glyA PE=3 SV=1
Length = 415
Score = 265 bits (677), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/290 (48%), Positives = 186/290 (64%), Gaps = 30/290 (10%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DP + +I E E RQ LE+I SENFTS +VM+A+GSV TNKY+EGYPG RYYGG EY
Sbjct: 8 DPAVYEIFEKELQRQTDHLEMIASENFTSPAVMEAMGSVFTNKYAEGYPGKRYYGGCEYA 67
Query: 91 DMAESLCQKRALEAF-----RLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGG 145
D E L +RA E F + P SGS +N VY ALLKP+D+I+ +DL HGG
Sbjct: 68 DAIEELAIQRAKELFGCEFVNVQPH------SGSQANQGVYLALLKPYDKILGMDLSHGG 121
Query: 146 HLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYAR 205
HL+HG K++A +++ Y +N+ G+IDYD++ A + +PKLIV GASAY R
Sbjct: 122 HLTHG-----AKVNASGKIYQSFFYGVNDE-GWIDYDRVLDIAKIVKPKLIVCGASAYPR 175
Query: 206 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 265
+ D+++ R++ ++ A+++AD+AHI+GLVAAG PSPF Y DVVTTTTHK+LRGPRG MI
Sbjct: 176 VIDFKKFREIADEVGALLMADIAHIAGLVAAGEHPSPFPYCDVVTTTTHKTLRGPRGGMI 235
Query: 266 FFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315
D +KIN A+FPG+QGGP H I AV +
Sbjct: 236 MTNDA-------------DIAKKINSAIFPGIQGGPLVHVIAAKAVGFGE 272
>sp|Q0AUC3|GLYA_SYNWW Serine hydroxymethyltransferase OS=Syntrophomonas wolfei subsp.
wolfei (strain Goettingen) GN=glyA PE=3 SV=1
Length = 415
Score = 265 bits (677), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 138/289 (47%), Positives = 185/289 (64%), Gaps = 20/289 (6%)
Query: 30 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 89
VDPE+A+ IE E+ARQ LELI SENF S +VM A GSVMTNKY+EG PGARYYGG EY
Sbjct: 11 VDPEVAEAIEKEEARQNNKLELIASENFVSRAVMAAQGSVMTNKYAEGLPGARYYGGCEY 70
Query: 90 IDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSH 149
+D+ E L + R E F + SG+ +N VY A L+P IM ++L HGGHL+H
Sbjct: 71 VDIVEELARDRVKEIFGAEHANVQPH-SGAQANTAVYFAALQPGQTIMGMNLNHGGHLTH 129
Query: 150 GYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 209
G K++ +F + Y +N T IDY++L + A RP++IVAGASAY R+ D+
Sbjct: 130 G-----SKVNISGKYFNIVDYGVNRDTERIDYEELREIALKARPQMIVAGASAYPRILDF 184
Query: 210 ERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 269
++ R++ ++ A++ DMAHI+GLVAAG+ PSP YAD V++TTHK+LRGPRG I R+
Sbjct: 185 KKFREIADEAGALLFVDMAHIAGLVAAGLHPSPVPYADFVSSTTHKTLRGPRGGFILCRQ 244
Query: 270 GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
++ KI++AVFPG+QGGP H I AV K+ T
Sbjct: 245 --------------EWANKIDKAVFPGIQGGPLMHVIAAKAVCFKEALT 279
>sp|B1I6M4|GLYA_DESAP Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain
MP104C) GN=glyA PE=3 SV=1
Length = 415
Score = 265 bits (676), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/297 (48%), Positives = 183/297 (61%), Gaps = 30/297 (10%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
N L DPEIA I E RQ LELI SENF S +V++A GSV+TNKY+EGYPGARY
Sbjct: 4 NRSLAETDPEIARAIALEITRQGAKLELIASENFVSRAVLEAQGSVLTNKYAEGYPGARY 63
Query: 84 YGGNEYIDMAESLCQKRALEAF-----RLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMA 138
YGG EY+D+ ES+ +RA E F + P SG+ +N Y A L+P D IM
Sbjct: 64 YGGCEYVDIVESVAIRRAKEIFGAGHANVQPH------SGAQANMAAYFAFLEPGDTIMG 117
Query: 139 LDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 198
+ L HGGHL+HG KI+ +F +PY + E TG IDYD++ A RPKLIV
Sbjct: 118 MRLAHGGHLTHG-----AKINFSGRYFRYVPYGVEEETGRIDYDRMHAIAREHRPKLIVG 172
Query: 199 GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR 258
GASAY R D+ R+R + + A+++ DMAHI+GL+AAG+ SP YADVVTTTTHK+LR
Sbjct: 173 GASAYPRELDFARMRAIADDVGALLMIDMAHIAGLIAAGLHMSPVPYADVVTTTTHKTLR 232
Query: 259 GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315
GPRG MI + +Y I++AVFPG+QGGP H I AVAL +
Sbjct: 233 GPRGGMILCPE--------------EYAAAIDKAVFPGIQGGPLMHVIAAKAVALGE 275
>sp|B8I2N8|GLYA_CLOCE Serine hydroxymethyltransferase OS=Clostridium cellulolyticum
(strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=glyA
PE=3 SV=1
Length = 412
Score = 264 bits (675), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 188/292 (64%), Gaps = 26/292 (8%)
Query: 30 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 89
+D ++A+ IE E RQ +ELI SENF S +V++A+G+ +TNKY+EGYPG RYYGG EY
Sbjct: 10 IDSQLAEAIELEVNRQRNKIELIASENFVSDAVIEALGTPLTNKYAEGYPGKRYYGGCEY 69
Query: 90 IDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSH 149
+D+ E L RA + F + SG+ +N VY A L P D I+ ++L HGGHLSH
Sbjct: 70 VDIVEQLAIDRAKQIFGAEHANVQPH-SGAQANTAVYFAFLNPGDTILGMNLAHGGHLSH 128
Query: 150 GYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARL 206
G S V+I +++ +PY + E YIDYD+L K+A PK+IVAGASAY R+
Sbjct: 129 G--------SPVNISGKYYKVVPYGVREDNCYIDYDELRKTAKENSPKIIVAGASAYPRI 180
Query: 207 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 266
D++ R++ ++ AI++ DMAHI+GLVAAGV PSP YADVVTTTTHK+LRGPRG MI
Sbjct: 181 LDFKAFREIADEVGAILMVDMAHIAGLVAAGVHPSPVPYADVVTTTTHKTLRGPRGGMIL 240
Query: 267 FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
++ +Y +KI+ AVFPG QGGP H I AV+ K+ T
Sbjct: 241 CKQ--------------EYAKKIDSAVFPGNQGGPLMHVIAAKAVSFKEALT 278
>sp|C6E348|GLYA_GEOSM Serine hydroxymethyltransferase OS=Geobacter sp. (strain M21)
GN=glyA PE=3 SV=1
Length = 415
Score = 263 bits (673), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/292 (46%), Positives = 185/292 (63%), Gaps = 20/292 (6%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
LE DP +A++I HE RQ LELI SENF S +V++A GSV+TNKY+EGYPG RYYGG
Sbjct: 4 LETFDPAVAEVIRHETERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRYYGG 63
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGH 146
+D+ E+L RA E F D SGS +N VY ++LKP D ++ ++L HGGH
Sbjct: 64 CHCVDVVENLAIDRAKELFGADHVNVQPH-SGSQANMAVYFSVLKPGDTVLGMNLAHGGH 122
Query: 147 LSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARL 206
L+HG ++ F +PY +++ T IDY++ E+ A +PK+IV GASAY R+
Sbjct: 123 LTHG-----SPVNFSGKLFNIVPYGVSKETQTIDYEETERLALEHKPKMIVVGASAYPRI 177
Query: 207 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 266
D+E R++ +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI
Sbjct: 178 IDFEAFRRIADKVGAVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMIM 237
Query: 267 FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
R+ ++ + +N +FPG+QGGP H I AVA K+ T
Sbjct: 238 CRE--------------EWAKTLNSNIFPGIQGGPLMHVIAAKAVAFKEALT 275
>sp|Q01QZ0|GLYA_SOLUE Serine hydroxymethyltransferase OS=Solibacter usitatus (strain
Ellin6076) GN=glyA PE=3 SV=1
Length = 426
Score = 263 bits (672), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/308 (46%), Positives = 194/308 (62%), Gaps = 35/308 (11%)
Query: 17 VTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSE 76
+T ++++ L VDPEI I+HE ARQ LELI SENFTS +V++A GSV TNKY+E
Sbjct: 1 MTESQRMSRTLAEVDPEIYQAIQHETARQDGQLELIASENFTSEAVLEATGSVFTNKYAE 60
Query: 77 GYPGARYYGGNEYIDMAESLCQKRALEAF-----RLDPEKWGGSLSGSPSNFQVYTALLK 131
GYPG RYYGG EY D+ E+L ++RA + F + P SGS +N Y A++
Sbjct: 61 GYPGKRYYGGCEYTDVVENLARERASKLFGAEYVNVQPH------SGSQANQAAYGAVVS 114
Query: 132 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 191
P D +M L+L HGGHL+HG+ + + ++ +PY + + IDYD++EK A
Sbjct: 115 PGDTVMGLNLAHGGHLTHGHALNFSGKT-----YKIVPYNVRKEDELIDYDEVEKLAREH 169
Query: 192 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 251
+PK+I+AGASAY R+ D+ R RK+ + A+ L DMAHISGLVAAGV P+P E+AD+VT+
Sbjct: 170 QPKMIIAGASAYPRIIDFARFRKIADAVGAVFLVDMAHISGLVAAGVHPNPCEFADIVTS 229
Query: 252 TTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAV 311
TTHK+LRGPR +I R+ K GKE I++ VFPG QGGP H +
Sbjct: 230 TTHKTLRGPRAGIILARE------KYGKE--------IDKNVFPGTQGGPLVHVM----- 270
Query: 312 ALKQVCTL 319
A K VC L
Sbjct: 271 AAKAVCFL 278
>sp|A7GGI2|GLYA_CLOBL Serine hydroxymethyltransferase OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=glyA PE=3 SV=1
Length = 413
Score = 263 bits (672), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 189/289 (65%), Gaps = 20/289 (6%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L+ DPE+ D+I+ E+ RQ +ELI SENFTS+SVM+A+GS++TNKY+EGYP RYYGG
Sbjct: 6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGG 65
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGH 146
E++D E L ++R + F + SGS +N VY ++L+ D I+ +DL HGGH
Sbjct: 66 CEFVDEVEDLARERLKKLFAAEHANVQPH-SGSQANMAVYMSVLQTGDTILGMDLSHGGH 124
Query: 147 LSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARL 206
L+HG ++ + + Y +++ T IDYDQL+K A RPK+IV+GASAY R+
Sbjct: 125 LTHG-----SPVNFSGKLYNFISYGVDKETETIDYDQLKKIALENRPKMIVSGASAYPRI 179
Query: 207 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 266
D+E+IR++C++ A M+ DMAHI+GLVA G+ PSP YAD VTTTTHK+LRGPRG I
Sbjct: 180 IDFEKIREICDEIDAYMMVDMAHIAGLVATGLHPSPVPYADFVTTTTHKTLRGPRGGAIL 239
Query: 267 FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315
++ Y + +++A+FPG+QGGP HTI AV ++
Sbjct: 240 CKE--------------KYAKAVDKAIFPGIQGGPLMHTIAAKAVCFRE 274
>sp|B5E8U0|GLYA_GEOBB Serine hydroxymethyltransferase OS=Geobacter bemidjiensis (strain
Bem / ATCC BAA-1014 / DSM 16622) GN=glyA PE=3 SV=1
Length = 415
Score = 263 bits (671), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/292 (46%), Positives = 184/292 (63%), Gaps = 20/292 (6%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
LE DP +A++I E RQ LELI SENF S +V++A GSV+TNKY+EGYPG RYYGG
Sbjct: 4 LETFDPAVAEVIRQETERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRYYGG 63
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGH 146
+D+ E+L RA E F D SGS +N VY ++LKP D ++ ++L HGGH
Sbjct: 64 CHCVDVVENLAIDRAKELFGADHVNVQPH-SGSQANMAVYFSVLKPGDTVLGMNLAHGGH 122
Query: 147 LSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARL 206
L+HG ++ F +PY +++ T IDY++ E+ A +PK+IV GASAY R+
Sbjct: 123 LTHG-----SPVNFSGKLFNIVPYGVSKETQTIDYEETERLALEHKPKMIVVGASAYPRI 177
Query: 207 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 266
D+E R++ +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI
Sbjct: 178 IDFEAFRRIADKVGAVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMIM 237
Query: 267 FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
R+ D+ + +N +FPG+QGGP H I AVA K+ T
Sbjct: 238 CRE--------------DWAKTLNSNIFPGIQGGPLMHVIAAKAVAFKEALT 275
>sp|Q1D345|GLYA_MYXXD Serine hydroxymethyltransferase OS=Myxococcus xanthus (strain DK
1622) GN=glyA PE=3 SV=1
Length = 418
Score = 262 bits (669), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/292 (47%), Positives = 181/292 (61%), Gaps = 20/292 (6%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L VDPEIA ++ E RQ +GLELI SENF S +VM+AVGSV+TNKY+EGYPG RYYGG
Sbjct: 7 LAEVDPEIARVLREETQRQEEGLELIASENFVSPAVMEAVGSVLTNKYAEGYPGKRYYGG 66
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGH 146
E +D+AE+L RA + F D SGS +N + AL+KP D +++LDL GGH
Sbjct: 67 CEVVDVAENLAIARAKDLFGADAVNVQAH-SGSQANMGAFMALMKPGDTMLSLDLNSGGH 125
Query: 147 LSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARL 206
L+HG + ++ + Y L T ID+ Q+E A +PK+IV GASAY R
Sbjct: 126 LTHGATFNFS-----GKLYKVVHYGLTRDTETIDFAQVESLAKEHKPKVIVVGASAYPRT 180
Query: 207 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 266
D+ + R++ + A ML DMAHI+GLVAAGV PSP AD+VT+TTHK+LRGPRG ++
Sbjct: 181 LDFAKFREIADAVGAAMLVDMAHIAGLVAAGVHPSPVPVADIVTSTTHKTLRGPRGGLVL 240
Query: 267 FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318
R+ Y + IN +FPG+QGGP H I G AVA K+ +
Sbjct: 241 SRE--------------PYAKAINSQIFPGIQGGPLMHVIAGKAVAFKEALS 278
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,099,023
Number of Sequences: 539616
Number of extensions: 5931251
Number of successful extensions: 16609
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 13298
Number of HSP's gapped (non-prelim): 870
length of query: 356
length of database: 191,569,459
effective HSP length: 118
effective length of query: 238
effective length of database: 127,894,771
effective search space: 30438955498
effective search space used: 30438955498
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)