Query 018401
Match_columns 356
No_of_seqs 298 out of 2989
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 08:42:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018401.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018401hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0112 GlyA Glycine/serine hy 100.0 3.1E-45 6.6E-50 331.2 27.2 275 25-319 5-280 (413)
2 KOG2467 Glycine/serine hydroxy 100.0 4.8E-44 1E-48 318.2 22.9 303 17-319 11-317 (477)
3 PLN02271 serine hydroxymethylt 100.0 5.9E-43 1.3E-47 334.9 27.0 303 17-319 119-431 (586)
4 PF00464 SHMT: Serine hydroxym 100.0 9.7E-43 2.1E-47 325.9 22.1 293 27-319 1-296 (399)
5 PLN03226 serine hydroxymethylt 100.0 3E-40 6.5E-45 320.6 30.1 307 13-319 1-310 (475)
6 PTZ00094 serine hydroxymethylt 100.0 3.9E-38 8.5E-43 306.5 29.5 284 24-318 12-298 (452)
7 PRK13580 serine hydroxymethylt 100.0 7.2E-38 1.6E-42 299.2 27.7 272 25-319 28-335 (493)
8 COG0520 csdA Selenocysteine ly 100.0 3.9E-35 8.5E-40 278.9 19.3 288 49-350 24-329 (405)
9 PRK13034 serine hydroxymethylt 100.0 9.6E-33 2.1E-37 265.7 27.9 278 22-318 4-281 (416)
10 COG1104 NifS Cysteine sulfinat 100.0 1.5E-33 3.2E-38 259.4 18.5 272 53-352 8-292 (386)
11 PRK00011 glyA serine hydroxyme 100.0 1.4E-31 3E-36 258.7 28.3 275 25-318 4-278 (416)
12 cd00378 SHMT Serine-glycine hy 100.0 2.2E-31 4.8E-36 256.2 28.3 273 29-318 2-274 (402)
13 PF00266 Aminotran_5: Aminotra 100.0 4.3E-29 9.3E-34 237.8 19.2 280 52-347 5-301 (371)
14 PLN02651 cysteine desulfurase 100.0 3.8E-29 8.1E-34 237.6 18.6 267 52-348 5-287 (364)
15 KOG1549 Cysteine desulfurase N 100.0 4.3E-29 9.3E-34 230.7 18.3 247 47-322 43-303 (428)
16 PRK10874 cysteine sulfinate de 100.0 4.8E-28 1E-32 232.9 20.7 264 48-328 20-300 (401)
17 PRK09295 bifunctional cysteine 100.0 8.1E-28 1.7E-32 231.7 20.4 266 48-329 24-306 (406)
18 TIGR03392 FeS_syn_CsdA cystein 100.0 1.1E-27 2.3E-32 230.3 20.3 266 48-329 17-298 (398)
19 TIGR01977 am_tr_V_EF2568 cyste 100.0 5.6E-27 1.2E-31 223.5 20.6 257 57-329 11-275 (376)
20 PLN02855 Bifunctional selenocy 100.0 5.5E-27 1.2E-31 227.1 20.5 285 48-348 33-336 (424)
21 TIGR02006 IscS cysteine desulf 100.0 3.1E-27 6.6E-32 227.3 18.4 239 53-318 10-259 (402)
22 TIGR03235 DNA_S_dndA cysteine 100.0 5.8E-27 1.3E-31 221.7 19.2 239 53-318 5-257 (353)
23 TIGR03402 FeS_nifS cysteine de 99.9 4.4E-27 9.6E-32 224.6 18.2 240 52-319 5-252 (379)
24 PLN02409 serine--glyoxylate am 99.9 1.8E-26 3.9E-31 221.7 19.9 256 48-328 10-277 (401)
25 COG0075 Serine-pyruvate aminot 99.9 9.8E-26 2.1E-30 209.2 20.8 247 48-320 6-262 (383)
26 TIGR03403 nifS_epsilon cystein 99.9 5.7E-26 1.2E-30 217.2 19.4 238 53-318 6-255 (382)
27 TIGR01979 sufS cysteine desulf 99.9 1E-25 2.2E-30 216.9 21.3 266 49-330 20-301 (403)
28 PRK02948 cysteine desulfurase; 99.9 7.9E-26 1.7E-30 216.1 18.6 238 53-318 7-253 (381)
29 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.5E-25 3.2E-30 215.4 20.5 243 49-319 19-276 (397)
30 cd06451 AGAT_like Alanine-glyo 99.9 2.5E-25 5.4E-30 210.7 21.1 246 49-318 1-254 (356)
31 PRK14012 cysteine desulfurase; 99.9 1.1E-25 2.3E-30 216.8 18.8 239 53-318 10-261 (404)
32 cd06453 SufS_like Cysteine des 99.9 2.4E-25 5.3E-30 212.1 21.1 261 52-327 5-278 (373)
33 TIGR01814 kynureninase kynuren 99.9 1.1E-25 2.3E-30 216.9 18.4 270 47-329 27-314 (406)
34 TIGR02326 transamin_PhnW 2-ami 99.9 2.7E-24 5.9E-29 204.2 21.3 254 48-327 4-267 (363)
35 PRK02769 histidine decarboxyla 99.9 1.4E-23 3E-28 199.0 23.9 251 59-332 35-300 (380)
36 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 4.7E-24 1E-28 204.1 20.4 205 48-270 20-236 (387)
37 PLN02724 Molybdenum cofactor s 99.9 2.5E-24 5.5E-29 222.4 18.9 274 48-333 35-349 (805)
38 PRK13479 2-aminoethylphosphona 99.9 3.1E-23 6.8E-28 197.2 21.2 249 50-323 8-264 (368)
39 COG1168 MalY Bifunctional PLP- 99.9 6.4E-23 1.4E-27 185.9 18.7 238 47-316 26-282 (388)
40 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 7.4E-23 1.6E-27 194.2 19.7 200 52-270 7-217 (361)
41 COG0436 Aspartate/tyrosine/aro 99.9 2.3E-22 5E-27 191.7 21.1 239 47-316 29-285 (393)
42 KOG0257 Kynurenine aminotransf 99.9 2.5E-22 5.5E-27 183.7 19.7 229 24-269 9-261 (420)
43 PLN03032 serine decarboxylase; 99.9 1.5E-21 3.2E-26 184.0 24.8 199 58-270 35-250 (374)
44 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 6.7E-22 1.4E-26 186.9 22.1 247 51-323 3-258 (355)
45 PRK13520 L-tyrosine decarboxyl 99.9 6.3E-22 1.4E-26 188.4 20.2 236 51-318 25-278 (371)
46 PRK03080 phosphoserine aminotr 99.9 1.4E-22 3E-27 193.3 14.8 252 47-331 12-279 (378)
47 TIGR01822 2am3keto_CoA 2-amino 99.9 8.9E-22 1.9E-26 188.9 20.3 236 46-317 38-289 (393)
48 TIGR01437 selA_rel uncharacter 99.9 1.9E-21 4E-26 184.4 21.4 217 54-318 21-259 (363)
49 cd00611 PSAT_like Phosphoserin 99.9 2.1E-22 4.6E-27 190.5 14.5 266 49-343 1-278 (355)
50 KOG2862 Alanine-glyoxylate ami 99.9 8.8E-22 1.9E-26 173.0 17.1 282 50-355 20-317 (385)
51 cd00615 Orn_deC_like Ornithine 99.9 8.8E-23 1.9E-27 188.2 11.4 200 95-318 62-272 (294)
52 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.1E-21 2.3E-26 186.9 17.8 205 47-270 7-224 (370)
53 PRK05355 3-phosphoserine/phosp 99.9 1.1E-21 2.3E-26 185.6 16.1 269 48-342 4-280 (360)
54 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.1E-20 2.3E-25 180.1 22.7 229 58-318 32-283 (373)
55 PRK13238 tnaA tryptophanase/L- 99.9 5.9E-21 1.3E-25 185.4 20.2 257 28-319 14-315 (460)
56 TIGR01788 Glu-decarb-GAD gluta 99.9 4.4E-21 9.5E-26 184.4 18.9 198 55-270 50-277 (431)
57 cd00613 GDC-P Glycine cleavage 99.9 1.8E-20 3.9E-25 180.1 21.1 173 88-271 60-242 (398)
58 COG0399 WecE Predicted pyridox 99.9 1.5E-20 3.2E-25 175.0 18.5 189 55-270 10-199 (374)
59 PRK07179 hypothetical protein; 99.9 1.8E-20 4E-25 180.6 19.2 223 59-319 70-301 (407)
60 PRK06108 aspartate aminotransf 99.9 3.9E-20 8.5E-25 176.8 21.1 225 29-269 7-248 (382)
61 cd06454 KBL_like KBL_like; thi 99.9 1.8E-20 3.9E-25 176.8 17.7 223 59-318 17-251 (349)
62 COG0156 BioF 7-keto-8-aminopel 99.8 6E-20 1.3E-24 172.2 19.3 233 48-319 41-292 (388)
63 PRK08361 aspartate aminotransf 99.8 7E-20 1.5E-24 175.7 18.7 225 27-269 14-253 (391)
64 TIGR01364 serC_1 phosphoserine 99.8 3.9E-20 8.4E-25 174.1 16.5 253 57-336 2-263 (349)
65 PLN00175 aminotransferase fami 99.8 2.1E-19 4.5E-24 173.4 21.2 227 24-269 33-275 (413)
66 PRK08912 hypothetical protein; 99.8 2.3E-19 5E-24 171.9 21.2 230 21-269 2-248 (387)
67 PRK08960 hypothetical protein; 99.8 4.2E-19 9.2E-24 170.0 22.3 226 25-269 7-250 (387)
68 PRK06939 2-amino-3-ketobutyrat 99.8 9.3E-20 2E-24 175.0 17.6 236 47-318 43-294 (397)
69 COG3844 Kynureninase [Amino ac 99.8 1.7E-19 3.7E-24 159.8 17.1 279 47-342 31-327 (407)
70 PRK06225 aspartate aminotransf 99.8 4.1E-19 8.8E-24 169.8 21.2 221 28-269 7-241 (380)
71 PRK08068 transaminase; Reviewe 99.8 7.3E-19 1.6E-23 168.5 22.6 206 47-269 33-256 (389)
72 PRK05957 aspartate aminotransf 99.8 5.3E-19 1.1E-23 169.5 21.4 227 25-269 6-249 (389)
73 PRK11658 UDP-4-amino-4-deoxy-L 99.8 1.5E-19 3.3E-24 172.4 17.5 185 57-269 11-196 (379)
74 TIGR03540 DapC_direct LL-diami 99.8 5.8E-19 1.2E-23 168.9 21.4 207 46-269 29-253 (383)
75 PRK07366 succinyldiaminopimela 99.8 7E-19 1.5E-23 168.6 22.0 228 25-269 5-255 (388)
76 PRK12414 putative aminotransfe 99.8 5.7E-19 1.2E-23 168.9 21.2 226 25-269 9-251 (384)
77 PRK06348 aspartate aminotransf 99.8 7.8E-19 1.7E-23 168.0 21.5 231 21-269 4-250 (384)
78 PRK05958 8-amino-7-oxononanoat 99.8 5.8E-19 1.3E-23 168.7 19.8 236 46-318 39-288 (385)
79 PRK09147 succinyldiaminopimela 99.8 1.1E-18 2.4E-23 167.6 21.7 225 26-269 4-261 (396)
80 PRK07681 aspartate aminotransf 99.8 1.6E-18 3.4E-23 166.8 22.4 227 25-269 7-255 (399)
81 PLN02414 glycine dehydrogenase 99.8 3.8E-19 8.3E-24 183.7 19.2 218 88-325 564-804 (993)
82 PRK05942 aspartate aminotransf 99.8 1.7E-18 3.8E-23 166.2 22.6 227 26-269 11-259 (394)
83 TIGR01366 serC_3 phosphoserine 99.8 8.5E-20 1.9E-24 172.8 13.4 247 49-325 5-262 (361)
84 PRK13355 bifunctional HTH-doma 99.8 6.5E-19 1.4E-23 174.6 19.9 226 23-268 119-368 (517)
85 TIGR00858 bioF 8-amino-7-oxono 99.8 8.1E-19 1.8E-23 166.1 19.3 235 47-318 17-266 (360)
86 PRK07309 aromatic amino acid a 99.8 1.6E-18 3.4E-23 166.3 21.5 231 21-269 5-253 (391)
87 cd06502 TA_like Low-specificit 99.8 3.1E-19 6.8E-24 167.6 16.3 193 54-269 4-210 (338)
88 PLN02368 alanine transaminase 99.8 2.2E-18 4.7E-23 165.4 22.1 174 84-267 103-306 (407)
89 PRK06207 aspartate aminotransf 99.8 1.3E-18 2.8E-23 167.5 20.5 208 47-269 40-267 (405)
90 PRK07682 hypothetical protein; 99.8 1.5E-18 3.2E-23 165.7 20.6 206 46-269 20-242 (378)
91 PRK09276 LL-diaminopimelate am 99.8 3.4E-18 7.4E-23 163.7 22.8 228 25-269 6-255 (385)
92 TIGR03576 pyridox_MJ0158 pyrid 99.8 5.1E-19 1.1E-23 166.4 16.6 211 59-316 35-250 (346)
93 PRK07777 aminotransferase; Val 99.8 2.6E-18 5.5E-23 164.6 21.8 227 26-269 5-248 (387)
94 TIGR03588 PseC UDP-4-keto-6-de 99.8 1.1E-18 2.4E-23 166.8 19.1 185 58-270 8-200 (380)
95 PRK07337 aminotransferase; Val 99.8 1.5E-18 3.3E-23 166.2 20.2 225 26-269 6-248 (388)
96 PRK07550 hypothetical protein; 99.8 3.1E-18 6.7E-23 164.0 21.8 205 47-269 30-252 (386)
97 PF01041 DegT_DnrJ_EryC1: DegT 99.8 3.3E-19 7.2E-24 169.2 14.9 183 60-270 5-190 (363)
98 PTZ00377 alanine aminotransfer 99.8 3.5E-18 7.6E-23 168.0 22.2 195 59-267 90-314 (481)
99 PLN02452 phosphoserine transam 99.8 6E-19 1.3E-23 166.3 15.8 267 48-340 8-282 (365)
100 PRK05764 aspartate aminotransf 99.8 3.9E-18 8.4E-23 163.7 21.8 228 24-269 5-254 (393)
101 cd06450 DOPA_deC_like DOPA dec 99.8 1.7E-19 3.7E-24 169.9 11.8 173 85-268 31-230 (345)
102 PLN03227 serine palmitoyltrans 99.8 2.7E-18 5.9E-23 164.3 20.2 190 59-269 14-223 (392)
103 TIGR01825 gly_Cac_T_rel pyrido 99.8 1.9E-18 4.2E-23 165.3 18.9 236 46-318 33-282 (385)
104 PRK06290 aspartate aminotransf 99.8 1.1E-17 2.3E-22 161.3 23.9 205 47-269 45-267 (410)
105 PRK04366 glycine dehydrogenase 99.8 3.5E-18 7.5E-23 167.6 20.8 197 53-271 77-293 (481)
106 cd01494 AAT_I Aspartate aminot 99.8 9.3E-19 2E-23 147.2 14.6 164 96-268 4-170 (170)
107 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 7E-20 1.5E-24 172.8 8.3 203 96-319 70-294 (417)
108 PLN02483 serine palmitoyltrans 99.8 1.7E-18 3.7E-23 169.9 18.3 191 95-318 149-360 (489)
109 PLN02187 rooty/superroot1 99.8 5E-18 1.1E-22 165.7 21.0 207 46-269 66-292 (462)
110 TIGR03537 DapC succinyldiamino 99.8 4.1E-18 8.9E-23 161.0 19.7 202 49-269 3-222 (350)
111 PRK09082 methionine aminotrans 99.8 2.9E-18 6.3E-23 164.2 18.6 226 25-269 10-252 (386)
112 PRK07683 aminotransferase A; V 99.8 7.8E-18 1.7E-22 161.3 21.4 226 26-269 8-249 (387)
113 PRK05937 8-amino-7-oxononanoat 99.8 2.9E-18 6.3E-23 163.3 18.2 225 59-319 20-262 (370)
114 cd00616 AHBA_syn 3-amino-5-hyd 99.8 2.6E-18 5.6E-23 162.3 17.3 158 96-269 22-182 (352)
115 PTZ00433 tyrosine aminotransfe 99.8 5.3E-18 1.2E-22 163.7 19.7 229 22-267 7-263 (412)
116 PLN00145 tyrosine/nicotianamin 99.8 1E-17 2.2E-22 162.3 21.7 206 47-269 53-278 (430)
117 PLN02656 tyrosine transaminase 99.8 8.3E-18 1.8E-22 162.2 20.9 205 46-268 31-256 (409)
118 cd00617 Tnase_like Tryptophana 99.8 7.5E-18 1.6E-22 161.8 20.4 205 84-316 49-287 (431)
119 TIGR00474 selA seryl-tRNA(sec) 99.8 3.6E-18 7.7E-23 164.9 17.9 200 53-270 88-303 (454)
120 TIGR03538 DapC_gpp succinyldia 99.8 1.3E-17 2.8E-22 160.1 21.6 222 29-269 6-260 (393)
121 TIGR01141 hisC histidinol-phos 99.8 1.6E-18 3.6E-23 163.4 15.1 197 47-269 20-226 (346)
122 PLN02822 serine palmitoyltrans 99.8 5.6E-18 1.2E-22 165.9 19.0 234 47-318 110-365 (481)
123 PRK04311 selenocysteine syntha 99.8 6E-18 1.3E-22 163.8 18.4 231 53-317 93-340 (464)
124 PRK08574 cystathionine gamma-s 99.8 1.5E-18 3.2E-23 165.5 13.8 153 97-269 58-215 (385)
125 TIGR03799 NOD_PanD_pyr putativ 99.8 3.5E-18 7.6E-23 167.7 16.5 244 88-348 125-427 (522)
126 PRK07324 transaminase; Validat 99.8 4.7E-18 1E-22 162.0 16.7 199 47-269 27-238 (373)
127 PRK03317 histidinol-phosphate 99.8 5.7E-18 1.2E-22 161.2 17.2 235 48-315 28-273 (368)
128 PRK08363 alanine aminotransfer 99.8 1.5E-17 3.2E-22 160.0 20.2 204 47-267 31-251 (398)
129 PLN02721 threonine aldolase 99.8 5.3E-18 1.2E-22 160.2 16.4 200 48-269 7-222 (353)
130 PRK08776 cystathionine gamma-s 99.8 3.4E-18 7.4E-23 163.9 14.8 156 95-269 63-223 (405)
131 PRK07810 O-succinylhomoserine 99.8 2.7E-18 5.8E-23 164.6 14.0 156 96-270 74-234 (403)
132 PRK08861 cystathionine gamma-s 99.8 2.6E-18 5.7E-23 163.5 13.8 154 97-269 58-216 (388)
133 PRK14807 histidinol-phosphate 99.8 1.4E-17 3.1E-22 157.4 18.7 199 48-269 24-229 (351)
134 PRK06107 aspartate aminotransf 99.8 2.8E-17 6.1E-22 158.2 20.9 206 46-269 33-257 (402)
135 PLN02231 alanine transaminase 99.8 2.8E-17 6E-22 162.5 21.2 226 28-267 112-366 (534)
136 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1.7E-17 3.6E-22 157.9 18.8 186 57-270 8-197 (376)
137 TIGR01324 cysta_beta_ly_B cyst 99.8 5E-18 1.1E-22 161.3 15.1 159 88-269 50-213 (377)
138 PRK15407 lipopolysaccharide bi 99.8 2.6E-17 5.6E-22 159.3 20.0 159 96-270 67-236 (438)
139 PRK07503 methionine gamma-lyas 99.8 5E-18 1.1E-22 162.9 14.7 155 96-269 69-228 (403)
140 PRK08636 aspartate aminotransf 99.8 6.6E-17 1.4E-21 155.7 22.5 228 27-269 10-264 (403)
141 TIGR01328 met_gam_lyase methio 99.8 4.9E-18 1.1E-22 162.4 14.3 155 96-269 63-222 (391)
142 PRK07504 O-succinylhomoserine 99.8 3.9E-18 8.4E-23 163.4 13.6 155 96-269 69-228 (398)
143 PLN02955 8-amino-7-oxononanoat 99.8 3.8E-17 8.2E-22 156.9 20.2 248 49-339 105-385 (476)
144 TIGR01821 5aminolev_synth 5-am 99.8 2.9E-17 6.3E-22 158.1 19.5 224 59-319 61-297 (402)
145 PRK09148 aminotransferase; Val 99.8 8.5E-17 1.9E-21 155.0 22.3 226 27-269 7-254 (405)
146 PRK03158 histidinol-phosphate 99.8 1.5E-17 3.3E-22 157.6 16.9 197 47-269 30-238 (359)
147 PRK06234 methionine gamma-lyas 99.8 6.7E-18 1.4E-22 162.0 14.4 154 97-269 69-229 (400)
148 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 2.8E-17 6E-22 156.7 18.4 185 58-270 9-196 (375)
149 PRK07811 cystathionine gamma-s 99.8 7.2E-18 1.6E-22 161.1 14.3 156 96-270 65-225 (388)
150 PLN02376 1-aminocyclopropane-1 99.8 2.1E-17 4.6E-22 162.3 17.9 214 47-269 47-295 (496)
151 PRK09265 aminotransferase AlaT 99.8 4E-17 8.7E-22 157.3 19.4 203 47-268 34-255 (404)
152 PRK08134 O-acetylhomoserine am 99.8 8.2E-18 1.8E-22 162.3 14.5 149 95-262 67-217 (433)
153 PLN00143 tyrosine/nicotianamin 99.8 2.8E-17 6.1E-22 158.5 18.2 205 46-268 32-257 (409)
154 PRK01533 histidinol-phosphate 99.8 1.2E-17 2.6E-22 158.7 15.1 222 47-313 30-265 (366)
155 TIGR01329 cysta_beta_ly_E cyst 99.8 7.2E-18 1.6E-22 160.6 13.4 156 95-270 50-210 (378)
156 PLN03026 histidinol-phosphate 99.8 3.1E-17 6.8E-22 156.6 17.8 195 47-269 53-256 (380)
157 PRK00451 glycine dehydrogenase 99.8 4.5E-17 9.8E-22 158.9 19.2 165 93-271 113-286 (447)
158 cd00609 AAT_like Aspartate ami 99.8 5.4E-17 1.2E-21 152.6 19.1 236 50-317 2-254 (350)
159 PRK09105 putative aminotransfe 99.8 3.9E-17 8.5E-22 155.4 18.0 196 46-269 43-249 (370)
160 PRK02731 histidinol-phosphate 99.8 2E-17 4.2E-22 157.4 15.8 197 46-269 32-241 (367)
161 PLN02263 serine decarboxylase 99.8 1.8E-16 3.9E-21 152.0 22.3 171 89-270 130-317 (470)
162 PRK09064 5-aminolevulinate syn 99.8 7.4E-17 1.6E-21 155.6 19.9 225 58-319 61-298 (407)
163 PRK05387 histidinol-phosphate 99.8 2.5E-17 5.5E-22 155.8 16.3 225 47-314 25-257 (353)
164 PRK06767 methionine gamma-lyas 99.8 9E-18 1.9E-22 160.5 13.2 156 96-270 65-225 (386)
165 PRK08133 O-succinylhomoserine 99.8 1.7E-17 3.7E-22 158.7 15.1 156 95-269 64-224 (390)
166 TIGR01265 tyr_nico_aTase tyros 99.8 1.5E-16 3.3E-21 153.2 21.7 208 46-269 31-257 (403)
167 PRK13392 5-aminolevulinate syn 99.7 3.9E-17 8.5E-22 157.6 17.6 224 58-318 61-297 (410)
168 PRK09028 cystathionine beta-ly 99.7 1.3E-17 2.9E-22 158.6 14.0 154 97-269 66-224 (394)
169 PRK08249 cystathionine gamma-s 99.7 1.4E-17 3.1E-22 159.4 13.8 156 95-269 67-227 (398)
170 TIGR02080 O_succ_thio_ly O-suc 99.7 1.8E-17 4E-22 157.9 14.3 156 96-270 55-215 (382)
171 TIGR03531 selenium_SpcS O-phos 99.7 8E-17 1.7E-21 154.5 18.6 173 90-270 103-289 (444)
172 PRK05968 hypothetical protein; 99.7 1.3E-17 2.9E-22 159.3 13.3 154 96-269 67-225 (389)
173 PRK04870 histidinol-phosphate 99.7 4.6E-17 1E-21 154.2 16.7 198 47-269 27-233 (356)
174 PRK08056 threonine-phosphate d 99.7 6.3E-17 1.4E-21 153.3 17.2 192 47-269 21-228 (356)
175 PRK08064 cystathionine beta-ly 99.7 1.6E-17 3.4E-22 158.9 13.1 155 95-269 57-216 (390)
176 PRK08045 cystathionine gamma-s 99.7 2.3E-17 5.1E-22 157.3 14.0 155 96-269 56-215 (386)
177 PRK07568 aspartate aminotransf 99.7 3.3E-16 7.2E-21 150.5 22.2 204 47-269 31-251 (397)
178 COG0079 HisC Histidinol-phosph 99.7 1E-16 2.2E-21 150.5 17.9 207 47-296 23-241 (356)
179 PLN02509 cystathionine beta-ly 99.7 3.2E-17 7E-22 158.7 14.7 158 93-270 134-296 (464)
180 cd00614 CGS_like CGS_like: Cys 99.7 2.5E-17 5.5E-22 156.6 13.7 155 96-269 44-203 (369)
181 PRK08114 cystathionine beta-ly 99.7 1.8E-17 4E-22 157.3 12.4 161 86-269 60-227 (395)
182 PRK00950 histidinol-phosphate 99.7 5.6E-17 1.2E-21 153.9 15.7 196 47-269 35-239 (361)
183 PRK08153 histidinol-phosphate 99.7 1.2E-16 2.5E-21 152.2 17.9 224 48-314 34-267 (369)
184 PLN02450 1-aminocyclopropane-1 99.7 1.7E-16 3.6E-21 155.3 19.4 213 47-269 39-288 (468)
185 TIGR01325 O_suc_HS_sulf O-succ 99.7 3.1E-17 6.7E-22 156.5 13.7 155 96-269 58-217 (380)
186 PRK06460 hypothetical protein; 99.7 5.5E-17 1.2E-21 154.5 15.1 156 95-269 48-208 (376)
187 PRK05939 hypothetical protein; 99.7 4.2E-17 9.1E-22 156.0 14.3 157 87-267 46-206 (397)
188 PRK07050 cystathionine beta-ly 99.7 3.1E-17 6.7E-22 157.0 13.1 155 96-269 69-228 (394)
189 PRK08175 aminotransferase; Val 99.7 6.7E-16 1.5E-20 148.3 22.3 206 46-269 29-253 (395)
190 PRK15029 arginine decarboxylas 99.7 3.1E-17 6.7E-22 165.4 13.5 203 96-318 209-440 (755)
191 PRK13393 5-aminolevulinate syn 99.7 3.1E-16 6.6E-21 151.2 19.8 224 59-319 61-297 (406)
192 PRK06855 aminotransferase; Val 99.7 6.7E-16 1.5E-20 149.9 21.8 205 47-268 33-258 (433)
193 PRK14809 histidinol-phosphate 99.7 2.5E-16 5.4E-21 149.3 18.3 199 47-269 31-238 (357)
194 PRK12462 phosphoserine aminotr 99.7 2.4E-16 5.1E-21 147.4 17.7 256 47-326 4-267 (364)
195 PRK03321 putative aminotransfe 99.7 1.1E-16 2.3E-21 151.5 15.6 197 47-269 23-232 (352)
196 PLN02880 tyrosine decarboxylas 99.7 9.8E-17 2.1E-21 157.1 15.6 173 88-270 118-323 (490)
197 TIGR01264 tyr_amTase_E tyrosin 99.7 2.8E-16 6.2E-21 151.2 18.2 207 47-269 32-256 (401)
198 PRK10534 L-threonine aldolase; 99.7 1.6E-16 3.4E-21 149.2 15.9 198 49-269 2-211 (333)
199 PRK08248 O-acetylhomoserine am 99.7 8.8E-17 1.9E-21 155.2 14.3 153 96-267 68-224 (431)
200 PRK02610 histidinol-phosphate 99.7 3.2E-16 6.9E-21 149.5 17.7 204 47-269 29-250 (374)
201 PRK05613 O-acetylhomoserine am 99.7 6E-17 1.3E-21 156.2 12.8 157 95-269 72-233 (437)
202 PRK06176 cystathionine gamma-s 99.7 7.9E-17 1.7E-21 153.4 13.3 154 96-269 54-212 (380)
203 PRK07269 cystathionine gamma-s 99.7 5.1E-17 1.1E-21 153.8 11.8 155 89-270 55-215 (364)
204 PRK05994 O-acetylhomoserine am 99.7 1.3E-16 2.9E-21 154.0 14.7 153 96-267 67-223 (427)
205 PRK06836 aspartate aminotransf 99.7 4.7E-16 1E-20 149.3 18.3 207 48-270 35-261 (394)
206 COG0076 GadB Glutamate decarbo 99.7 7.2E-16 1.6E-20 148.9 19.5 245 53-327 69-345 (460)
207 PLN02242 methionine gamma-lyas 99.7 1.1E-16 2.3E-21 154.1 13.8 156 96-269 80-240 (418)
208 PRK07812 O-acetylhomoserine am 99.7 1.3E-16 2.7E-21 154.0 13.6 154 96-267 73-230 (436)
209 PRK07590 L,L-diaminopimelate a 99.7 1.1E-15 2.5E-20 147.4 20.0 219 33-269 19-265 (409)
210 PRK05839 hypothetical protein; 99.7 2.7E-15 5.7E-20 143.1 21.6 200 47-269 25-248 (374)
211 PRK07865 N-succinyldiaminopime 99.7 1.4E-15 2.9E-20 144.6 19.2 216 23-269 3-239 (364)
212 TIGR00461 gcvP glycine dehydro 99.7 4.9E-16 1.1E-20 159.0 16.9 175 88-278 526-720 (939)
213 COG1103 Archaea-specific pyrid 99.7 9.8E-16 2.1E-20 132.8 15.8 207 46-272 15-236 (382)
214 PRK15481 transcriptional regul 99.7 1.3E-15 2.7E-20 148.1 18.7 199 48-269 87-297 (431)
215 PRK01688 histidinol-phosphate 99.7 2.8E-16 6.1E-21 148.6 13.8 187 48-269 30-229 (351)
216 PRK07671 cystathionine beta-ly 99.7 3.5E-16 7.7E-21 148.9 14.5 155 95-269 53-212 (377)
217 PRK05166 histidinol-phosphate 99.7 7.3E-16 1.6E-20 146.9 16.5 197 47-269 37-247 (371)
218 PRK05967 cystathionine beta-ly 99.7 4E-16 8.6E-21 148.3 13.6 156 95-269 67-227 (395)
219 PRK06084 O-acetylhomoserine am 99.7 5.3E-16 1.1E-20 149.7 14.4 155 96-269 62-221 (425)
220 PLN02590 probable tyrosine dec 99.7 2.3E-15 4.9E-20 147.9 18.9 173 88-270 166-371 (539)
221 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 4.4E-16 9.5E-21 150.3 13.7 155 96-269 61-219 (418)
222 PRK08247 cystathionine gamma-s 99.7 4.6E-16 9.9E-21 147.8 13.3 154 96-269 56-214 (366)
223 PRK13237 tyrosine phenol-lyase 99.7 1.8E-15 4E-20 143.9 16.9 207 85-319 75-315 (460)
224 PRK06702 O-acetylhomoserine am 99.7 6.4E-16 1.4E-20 148.4 13.9 152 88-262 61-215 (432)
225 PRK09257 aromatic amino acid a 99.7 3.8E-15 8.1E-20 143.2 19.2 224 28-267 6-260 (396)
226 PRK03967 histidinol-phosphate 99.7 2.3E-15 4.9E-20 141.6 17.3 195 47-269 19-220 (337)
227 PRK05367 glycine dehydrogenase 99.7 1.9E-15 4.1E-20 157.1 18.3 208 49-277 502-731 (954)
228 TIGR02618 tyr_phenol_ly tyrosi 99.7 1.5E-15 3.2E-20 144.2 15.9 208 84-319 67-308 (450)
229 PLN02607 1-aminocyclopropane-1 99.7 4.7E-15 1E-19 144.1 19.9 213 47-269 48-295 (447)
230 KOG0259 Tyrosine aminotransfer 99.7 3.4E-15 7.5E-20 135.1 17.3 207 47-270 62-288 (447)
231 KOG1359 Glycine C-acetyltransf 99.7 4.7E-16 1E-20 136.1 11.2 220 59-318 83-313 (417)
232 PRK13578 ornithine decarboxyla 99.7 3.5E-16 7.6E-21 156.4 11.3 208 96-319 178-415 (720)
233 PLN02672 methionine S-methyltr 99.7 4.3E-15 9.2E-20 154.4 19.3 203 47-269 698-926 (1082)
234 TIGR03542 DAPAT_plant LL-diami 99.7 1.2E-14 2.6E-19 140.0 21.1 224 26-269 6-262 (402)
235 PRK07908 hypothetical protein; 99.7 4.6E-15 9.9E-20 140.2 17.7 190 47-269 23-220 (349)
236 PF00155 Aminotran_1_2: Aminot 99.7 2.6E-15 5.6E-20 142.5 15.8 206 48-269 3-237 (363)
237 PRK09275 aspartate aminotransf 99.7 2.9E-15 6.3E-20 146.7 16.4 203 47-270 101-328 (527)
238 PTZ00376 aspartate aminotransf 99.7 4.6E-15 9.9E-20 143.0 17.6 208 46-266 29-264 (404)
239 TIGR03539 DapC_actino succinyl 99.7 6.7E-15 1.4E-19 139.5 18.2 191 47-269 22-233 (357)
240 KOG1360 5-aminolevulinate synt 99.6 4.7E-15 1E-19 134.8 16.1 224 59-320 187-424 (570)
241 cd00610 OAT_like Acetyl ornith 99.6 7.7E-15 1.7E-19 141.7 18.7 244 47-319 37-312 (413)
242 TIGR01365 serC_2 phosphoserine 99.6 2.3E-15 5E-20 142.1 14.5 242 50-323 6-262 (374)
243 PF00282 Pyridoxal_deC: Pyrido 99.6 9.2E-15 2E-19 138.6 18.3 173 87-270 74-278 (373)
244 PRK04635 histidinol-phosphate 99.6 2E-15 4.3E-20 142.9 13.5 160 96-269 64-230 (354)
245 PRK07582 cystathionine gamma-l 99.6 1.8E-15 3.9E-20 143.6 13.1 148 97-269 56-210 (366)
246 PRK06358 threonine-phosphate d 99.6 9.9E-15 2.1E-19 138.2 17.6 194 48-269 21-229 (354)
247 PF01212 Beta_elim_lyase: Beta 99.6 9.3E-16 2E-20 140.1 9.6 190 54-270 4-210 (290)
248 PRK07392 threonine-phosphate d 99.6 2E-14 4.4E-19 136.4 18.5 195 47-269 23-232 (360)
249 PRK09440 avtA valine--pyruvate 99.6 1.8E-14 3.9E-19 139.4 18.0 214 46-269 30-264 (416)
250 PRK07505 hypothetical protein; 99.6 5.6E-14 1.2E-18 135.3 20.7 234 47-318 47-301 (402)
251 TIGR03801 asp_4_decarbox aspar 99.6 1.5E-14 3.3E-19 141.5 16.6 205 47-270 95-327 (521)
252 PRK12566 glycine dehydrogenase 99.6 1E-14 2.3E-19 148.6 14.1 166 88-269 539-719 (954)
253 PRK06434 cystathionine gamma-l 99.6 6.1E-15 1.3E-19 140.1 11.5 157 87-270 63-225 (384)
254 PRK07049 methionine gamma-lyas 99.6 2.5E-14 5.4E-19 138.2 15.4 156 96-269 87-258 (427)
255 TIGR01140 L_thr_O3P_dcar L-thr 99.6 2.1E-14 4.5E-19 134.7 14.2 185 47-269 18-210 (330)
256 PRK04781 histidinol-phosphate 99.6 4.4E-14 9.5E-19 134.3 16.6 164 96-269 63-236 (364)
257 COG2008 GLY1 Threonine aldolas 99.6 3.1E-14 6.7E-19 129.3 14.5 196 54-270 6-215 (342)
258 COG4992 ArgD Ornithine/acetylo 99.6 9.4E-14 2E-18 128.6 17.5 267 46-352 42-336 (404)
259 PLN02414 glycine dehydrogenase 99.6 5E-14 1.1E-18 146.1 17.5 189 58-271 117-316 (993)
260 COG1167 ARO8 Transcriptional r 99.6 3.9E-14 8.4E-19 138.1 15.8 175 83-270 127-315 (459)
261 COG1921 SelA Selenocysteine sy 99.6 1.3E-13 2.9E-18 127.5 17.9 234 53-319 34-272 (395)
262 PRK14808 histidinol-phosphate 99.6 8.6E-14 1.9E-18 130.7 16.7 188 47-269 20-218 (335)
263 PRK15399 lysine decarboxylase 99.6 3.3E-14 7.1E-19 142.3 14.3 197 96-318 199-418 (713)
264 PRK15400 lysine decarboxylase 99.6 1E-14 2.2E-19 145.8 10.5 199 96-319 199-419 (714)
265 PRK08354 putative aminotransfe 99.6 8.9E-14 1.9E-18 129.3 16.1 180 47-267 9-196 (311)
266 PRK01278 argD acetylornithine 99.6 2.8E-13 6E-18 129.9 19.0 224 58-319 48-294 (389)
267 TIGR00707 argD acetylornithine 99.5 2.3E-13 5E-18 130.0 18.0 233 47-318 28-288 (379)
268 PRK00854 rocD ornithine--oxo-a 99.5 4.7E-13 1E-17 128.9 19.9 222 59-318 59-306 (401)
269 COG0626 MetC Cystathionine bet 99.5 1E-13 2.2E-18 130.3 14.4 161 87-270 62-228 (396)
270 PRK03244 argD acetylornithine 99.5 4.5E-13 9.8E-18 128.9 18.7 232 58-326 60-309 (398)
271 PF01053 Cys_Met_Meta_PP: Cys/ 99.5 4.5E-14 9.8E-19 133.9 11.5 159 87-269 54-219 (386)
272 COG2873 MET17 O-acetylhomoseri 99.5 9.1E-14 2E-18 125.9 12.3 158 88-269 62-224 (426)
273 COG0160 GabT 4-aminobutyrate a 99.5 9.2E-13 2E-17 125.3 19.5 279 47-352 57-373 (447)
274 TIGR03246 arg_catab_astC succi 99.5 8.2E-13 1.8E-17 126.9 19.5 242 47-327 36-306 (397)
275 KOG1368 Threonine aldolase [Am 99.5 5.5E-14 1.2E-18 123.5 9.8 191 58-270 34-240 (384)
276 PRK05367 glycine dehydrogenase 99.5 2.8E-13 6E-18 141.1 16.6 163 89-272 118-289 (954)
277 TIGR03811 tyr_de_CO2_Ent tyros 99.5 8.9E-13 1.9E-17 131.0 19.5 172 88-270 119-399 (608)
278 COG1982 LdcC Arginine/lysine/o 99.5 8.7E-14 1.9E-18 134.2 11.0 202 96-317 74-284 (557)
279 PRK05664 threonine-phosphate d 99.5 4.5E-13 9.7E-18 125.7 15.5 149 96-269 53-208 (330)
280 PLN02397 aspartate transaminas 99.5 8.8E-13 1.9E-17 127.7 18.0 174 83-266 86-282 (423)
281 PRK04073 rocD ornithine--oxo-a 99.5 2.2E-12 4.8E-17 124.0 19.3 220 58-319 57-306 (396)
282 PTZ00125 ornithine aminotransf 99.5 3.3E-12 7.1E-17 123.0 19.9 223 58-319 48-298 (400)
283 TIGR00713 hemL glutamate-1-sem 99.5 2.1E-12 4.5E-17 125.3 17.8 236 46-319 48-316 (423)
284 PRK06959 putative threonine-ph 99.5 1E-12 2.2E-17 123.7 14.3 179 47-269 25-214 (339)
285 KOG1357 Serine palmitoyltransf 99.5 1E-12 2.3E-17 121.5 13.8 259 19-318 99-396 (519)
286 PRK12403 putative aminotransfe 99.5 7.7E-12 1.7E-16 122.1 20.2 269 58-353 71-381 (460)
287 PRK08637 hypothetical protein; 99.4 6.6E-12 1.4E-16 120.4 19.3 174 85-268 41-242 (388)
288 PRK02627 acetylornithine amino 99.4 5.2E-12 1.1E-16 121.4 18.4 235 47-319 40-301 (396)
289 KOG0053 Cystathionine beta-lya 99.4 7.4E-13 1.6E-17 123.1 11.6 152 99-269 84-240 (409)
290 PRK03715 argD acetylornithine 99.4 6.8E-12 1.5E-16 120.3 18.3 231 58-328 53-306 (395)
291 PF03841 SelA: L-seryl-tRNA se 99.4 2.6E-13 5.6E-18 124.7 7.7 229 54-318 14-261 (367)
292 TIGR03372 putres_am_tran putre 99.4 1.2E-11 2.6E-16 119.7 19.6 262 58-354 92-382 (442)
293 PRK06425 histidinol-phosphate 99.4 2.7E-12 5.8E-17 120.5 14.5 182 47-269 17-209 (332)
294 COG0001 HemL Glutamate-1-semia 99.4 1.4E-11 2.9E-16 115.5 18.3 238 47-319 54-321 (432)
295 PRK02936 argD acetylornithine 99.4 1.5E-11 3.3E-16 117.4 18.8 235 47-319 30-286 (377)
296 COG1003 GcvP Glycine cleavage 99.4 4E-12 8.6E-17 117.4 13.7 174 88-277 105-295 (496)
297 KOG0256 1-aminocyclopropane-1- 99.4 9.8E-12 2.1E-16 113.9 15.6 178 83-270 116-320 (471)
298 PRK12381 bifunctional succinyl 99.4 2.2E-11 4.8E-16 117.4 18.5 228 58-319 56-302 (406)
299 TIGR02617 tnaA_trp_ase tryptop 99.4 1.1E-11 2.5E-16 116.9 15.9 232 57-319 54-324 (467)
300 PRK00062 glutamate-1-semialdeh 99.4 1.3E-11 2.7E-16 119.8 15.8 245 46-326 50-325 (426)
301 PRK08117 4-aminobutyrate amino 99.4 7.5E-11 1.6E-15 114.6 21.3 251 47-326 44-333 (433)
302 PRK11522 putrescine--2-oxoglut 99.4 3.4E-11 7.4E-16 117.3 18.8 261 58-354 99-389 (459)
303 PRK05093 argD bifunctional N-s 99.4 7.6E-11 1.6E-15 113.6 21.0 235 47-319 41-303 (403)
304 PRK04612 argD acetylornithine 99.4 4.1E-11 9E-16 115.3 18.9 272 47-354 41-341 (408)
305 PLN02760 4-aminobutyrate:pyruv 99.4 2.7E-11 5.8E-16 119.2 17.7 279 47-353 90-420 (504)
306 PLN02624 ornithine-delta-amino 99.4 5.9E-11 1.3E-15 116.4 19.8 219 59-319 93-344 (474)
307 PRK05964 adenosylmethionine--8 99.4 4.1E-11 9E-16 116.1 18.1 242 58-326 59-333 (423)
308 PRK06062 hypothetical protein; 99.4 7.7E-11 1.7E-15 114.8 19.9 252 47-327 54-344 (451)
309 PRK08360 4-aminobutyrate amino 99.3 1.1E-10 2.4E-15 113.5 20.6 280 47-354 42-358 (443)
310 TIGR01885 Orn_aminotrans ornit 99.3 9.4E-11 2E-15 112.9 20.0 224 58-319 54-306 (401)
311 PF06838 Met_gamma_lyase: Meth 99.3 3E-11 6.5E-16 110.0 15.3 170 93-270 55-240 (403)
312 PRK13360 omega amino acid--pyr 99.3 1.5E-10 3.3E-15 112.5 20.9 252 47-326 47-349 (442)
313 PRK07046 aminotransferase; Val 99.3 9.2E-11 2E-15 114.2 19.4 245 47-327 76-352 (453)
314 PRK04013 argD acetylornithine/ 99.3 7.5E-11 1.6E-15 111.6 18.2 243 58-353 41-301 (364)
315 PRK06058 4-aminobutyrate amino 99.3 1.2E-10 2.5E-15 113.5 20.0 268 58-354 73-373 (443)
316 PRK06105 aminotransferase; Pro 99.3 2.5E-10 5.4E-15 111.5 20.7 278 47-352 49-377 (460)
317 PRK07482 hypothetical protein; 99.3 2.1E-10 4.6E-15 112.1 19.6 282 47-354 51-382 (461)
318 PRK07495 4-aminobutyrate amino 99.3 4.6E-10 1E-14 108.6 21.5 250 47-326 41-324 (425)
319 PLN02482 glutamate-1-semialdeh 99.3 3.1E-10 6.7E-15 110.9 20.4 232 59-327 117-375 (474)
320 PRK04260 acetylornithine amino 99.3 1.6E-10 3.6E-15 110.2 18.0 242 47-327 30-292 (375)
321 PRK08593 4-aminobutyrate amino 99.3 3.4E-10 7.4E-15 110.2 19.7 267 58-352 59-359 (445)
322 PRK00615 glutamate-1-semialdeh 99.3 5.5E-10 1.2E-14 108.1 20.6 244 47-326 54-329 (433)
323 PRK05965 hypothetical protein; 99.3 3E-10 6.4E-15 111.0 18.8 280 47-353 47-375 (459)
324 PRK05639 4-aminobutyrate amino 99.3 3.9E-10 8.5E-15 109.9 19.5 267 58-354 70-375 (457)
325 PRK09792 4-aminobutyrate trans 99.3 4E-10 8.7E-15 109.1 19.3 243 58-326 57-324 (421)
326 PRK06541 hypothetical protein; 99.3 4.5E-10 9.7E-15 109.7 19.7 254 47-327 53-353 (460)
327 PRK07986 adenosylmethionine--8 99.3 4.1E-10 8.9E-15 108.9 18.9 265 58-352 60-362 (428)
328 PRK12389 glutamate-1-semialdeh 99.2 6.3E-10 1.4E-14 107.9 19.6 246 47-327 54-329 (428)
329 PRK05769 4-aminobutyrate amino 99.2 9.8E-10 2.1E-14 106.9 20.8 265 58-353 71-372 (441)
330 PRK06943 adenosylmethionine--8 99.2 8.5E-10 1.8E-14 107.5 20.3 278 47-352 55-380 (453)
331 PLN00144 acetylornithine trans 99.2 8.6E-10 1.9E-14 105.4 19.7 230 58-328 32-295 (382)
332 PRK06082 4-aminobutyrate amino 99.2 8.4E-10 1.8E-14 107.8 19.5 267 58-353 88-382 (459)
333 PRK09221 beta alanine--pyruvat 99.2 1.1E-09 2.4E-14 106.5 20.1 251 47-325 50-351 (445)
334 PRK06777 4-aminobutyrate amino 99.2 1.1E-09 2.3E-14 106.1 19.5 267 58-352 57-350 (421)
335 PRK06149 hypothetical protein; 99.2 2E-09 4.4E-14 114.1 23.1 277 47-352 586-898 (972)
336 PRK07678 aminotransferase; Val 99.2 1.5E-09 3.3E-14 105.8 20.1 277 47-352 48-372 (451)
337 PRK07481 hypothetical protein; 99.2 1.7E-09 3.7E-14 105.5 20.2 269 58-353 59-374 (449)
338 PRK05630 adenosylmethionine--8 99.2 8.6E-10 1.9E-14 106.6 17.8 265 58-352 57-359 (422)
339 KOG0258 Alanine aminotransfera 99.2 4E-10 8.6E-15 102.8 14.0 196 58-267 87-311 (475)
340 PRK07483 hypothetical protein; 99.2 1.4E-09 3.1E-14 105.7 18.9 270 58-354 47-359 (443)
341 KOG3846 L-kynurenine hydrolase 99.2 1E-10 2.2E-15 103.6 9.7 269 57-337 78-371 (465)
342 PRK06209 glutamate-1-semialdeh 99.2 1.7E-09 3.7E-14 105.0 18.6 243 46-327 48-317 (431)
343 PRK07480 putative aminotransfe 99.2 1.9E-09 4.2E-14 105.1 18.9 242 58-325 67-349 (456)
344 TIGR00700 GABAtrnsam 4-aminobu 99.2 4.2E-09 9E-14 102.1 20.8 241 58-326 50-323 (420)
345 PRK07030 adenosylmethionine--8 99.2 1.8E-09 3.8E-14 105.7 18.2 267 58-352 64-374 (466)
346 PRK06917 hypothetical protein; 99.2 2.4E-09 5.1E-14 104.3 19.0 268 58-353 48-358 (447)
347 PRK06173 adenosylmethionine--8 99.2 2E-09 4.3E-14 104.3 18.1 240 58-326 61-339 (429)
348 PRK06916 adenosylmethionine--8 99.2 1.7E-09 3.6E-14 105.8 17.6 268 57-353 72-384 (460)
349 PRK08742 adenosylmethionine--8 99.2 2.9E-09 6.4E-14 104.1 19.0 267 58-352 81-395 (472)
350 PRK06148 hypothetical protein; 99.1 4.6E-09 1E-13 111.6 21.8 268 58-353 639-939 (1013)
351 COG1932 SerC Phosphoserine ami 99.1 7E-10 1.5E-14 101.1 13.3 264 47-336 5-279 (365)
352 PF00202 Aminotran_3: Aminotra 99.1 7.9E-10 1.7E-14 103.9 14.0 266 58-351 33-328 (339)
353 PRK06938 diaminobutyrate--2-ox 99.1 2.5E-09 5.3E-14 104.6 17.8 279 47-354 64-384 (464)
354 TIGR00709 dat 2,4-diaminobutyr 99.1 6.5E-09 1.4E-13 101.2 20.6 279 47-354 40-359 (442)
355 PRK07036 hypothetical protein; 99.1 7E-09 1.5E-13 101.5 20.9 270 58-352 68-380 (466)
356 PRK08088 4-aminobutyrate amino 99.1 3.3E-09 7.3E-14 102.9 18.3 241 58-327 58-326 (425)
357 TIGR02407 ectoine_ectB diamino 99.1 7.2E-09 1.6E-13 100.1 19.4 233 58-319 52-314 (412)
358 PRK09264 diaminobutyrate--2-ox 99.1 7.6E-09 1.7E-13 100.3 19.7 208 47-269 40-283 (425)
359 TIGR00508 bioA adenosylmethion 99.1 6.9E-09 1.5E-13 100.6 19.2 243 57-326 61-340 (427)
360 KOG0633 Histidinol phosphate a 99.1 1.2E-09 2.6E-14 94.8 11.7 157 99-269 76-243 (375)
361 PRK06918 4-aminobutyrate amino 99.1 2.2E-08 4.8E-13 97.8 20.5 242 58-327 71-346 (451)
362 PRK06931 diaminobutyrate--2-ox 99.0 2.2E-08 4.8E-13 97.8 20.1 278 47-353 59-377 (459)
363 TIGR03251 LAT_fam L-lysine 6-t 99.0 9.5E-09 2.1E-13 99.8 17.4 155 181-353 205-373 (431)
364 KOG1402 Ornithine aminotransfe 99.0 3.8E-08 8.2E-13 88.3 17.1 254 58-352 76-361 (427)
365 KOG1404 Alanine-glyoxylate ami 99.0 5.3E-09 1.2E-13 95.7 11.9 125 209-352 235-365 (442)
366 TIGR00699 GABAtrns_euk 4-amino 99.0 1.8E-08 3.8E-13 98.1 15.8 150 180-350 237-400 (464)
367 TIGR00461 gcvP glycine dehydro 98.9 1.8E-08 3.9E-13 104.1 15.7 161 92-273 109-278 (939)
368 COG0161 BioA Adenosylmethionin 98.9 4.3E-08 9.3E-13 93.3 16.4 271 57-352 60-373 (449)
369 COG0403 GcvP Glycine cleavage 98.9 3.4E-08 7.3E-13 91.8 15.1 160 96-272 124-294 (450)
370 COG3977 Alanine-alpha-ketoisov 98.9 6.5E-08 1.4E-12 85.8 15.5 208 47-270 31-265 (417)
371 COG4100 Cystathionine beta-lya 98.9 4.1E-08 8.8E-13 87.1 14.2 168 96-271 69-252 (416)
372 KOG1358 Serine palmitoyltransf 98.9 2.7E-08 5.8E-13 91.1 12.5 197 48-269 96-317 (467)
373 KOG0629 Glutamate decarboxylas 98.9 3.1E-09 6.6E-14 98.2 5.7 168 92-270 141-337 (510)
374 PLN02974 adenosylmethionine-8- 98.8 2.4E-07 5.2E-12 95.6 18.6 156 182-354 567-750 (817)
375 PF02347 GDC-P: Glycine cleava 98.8 5.5E-08 1.2E-12 92.5 12.5 164 88-272 106-280 (429)
376 KOG1383 Glutamate decarboxylas 98.8 5.5E-08 1.2E-12 91.1 12.1 170 89-269 117-304 (491)
377 COG1448 TyrB Aspartate/tyrosin 98.8 2.8E-07 6.1E-12 84.7 16.3 220 31-269 10-263 (396)
378 PRK08297 L-lysine aminotransfe 98.8 1.5E-07 3.4E-12 91.6 15.7 248 58-329 62-355 (443)
379 KOG0634 Aromatic amino acid am 98.7 5E-07 1.1E-11 84.1 15.3 138 82-231 94-248 (472)
380 KOG1401 Acetylornithine aminot 98.7 6.6E-07 1.4E-11 82.8 16.0 247 57-340 72-349 (433)
381 PF12897 Aminotran_MocR: Alani 98.6 1.1E-06 2.3E-11 81.3 14.0 210 45-270 21-270 (425)
382 KOG2040 Glycine dehydrogenase 98.5 1.1E-06 2.4E-11 85.4 12.7 166 91-271 581-765 (1001)
383 PRK12566 glycine dehydrogenase 98.5 1.5E-06 3.3E-11 89.7 12.9 154 96-272 128-291 (954)
384 KOG1403 Predicted alanine-glyo 98.4 2.9E-06 6.2E-11 75.5 11.9 265 57-352 61-364 (452)
385 KOG0628 Aromatic-L-amino-acid/ 98.4 1.3E-06 2.9E-11 81.8 9.0 171 88-270 109-319 (511)
386 PF05889 SLA_LP_auto_ag: Solub 98.4 3.6E-07 7.8E-12 85.1 4.5 172 90-269 54-237 (389)
387 COG3033 TnaA Tryptophanase [Am 98.3 1.4E-05 3E-10 72.9 13.1 232 53-318 55-325 (471)
388 KOG2790 Phosphoserine aminotra 98.2 7.3E-06 1.6E-10 72.4 9.7 258 47-329 7-276 (370)
389 PLN02994 1-aminocyclopropane-1 98.0 9.7E-06 2.1E-10 67.0 6.0 60 85-144 89-152 (153)
390 KOG2040 Glycine dehydrogenase 97.4 0.0017 3.6E-08 63.9 11.1 154 97-271 168-329 (1001)
391 KOG1405 4-aminobutyrate aminot 96.9 0.0021 4.5E-08 59.0 6.4 76 180-257 254-344 (484)
392 KOG3843 Predicted serine hydro 95.6 0.023 5.1E-07 50.2 5.3 169 86-266 51-236 (432)
393 KOG1411 Aspartate aminotransfe 94.7 0.41 8.9E-06 44.2 10.5 192 47-257 53-275 (427)
394 KOG1412 Aspartate aminotransfe 93.6 0.33 7.2E-06 44.2 7.6 142 115-266 105-266 (410)
395 PF04864 Alliinase_C: Allinase 89.1 0.11 2.4E-06 48.0 -0.2 49 217-270 159-211 (363)
396 PLN02672 methionine S-methyltr 76.6 45 0.00097 36.5 12.8 164 46-230 387-567 (1082)
397 COG2870 RfaE ADP-heptose synth 70.1 9 0.00019 36.5 5.1 35 192-226 143-177 (467)
398 COG0514 RecQ Superfamily II DN 58.0 26 0.00055 35.5 6.1 100 115-234 41-146 (590)
399 PRK09375 quinolinate synthetas 57.9 74 0.0016 29.7 8.7 111 32-202 19-129 (319)
400 KOG0352 ATP-dependent DNA heli 56.5 28 0.00061 33.6 5.7 46 192-238 113-160 (641)
401 cd02067 B12-binding B12 bindin 56.1 44 0.00095 25.7 6.2 52 178-229 36-90 (119)
402 PF04131 NanE: Putative N-acet 50.9 54 0.0012 28.0 6.1 72 178-255 51-122 (192)
403 COG1504 Uncharacterized conser 50.9 44 0.00096 25.7 5.0 48 178-226 48-95 (121)
404 cd02070 corrinoid_protein_B12- 48.5 1.7E+02 0.0038 25.0 10.6 51 178-228 119-173 (201)
405 smart00642 Aamy Alpha-amylase 48.0 20 0.00043 29.9 3.1 26 203-228 66-91 (166)
406 PF02310 B12-binding: B12 bind 47.8 46 0.001 25.5 5.1 51 180-230 39-91 (121)
407 PRK02261 methylaspartate mutas 47.4 97 0.0021 24.9 7.0 42 178-219 40-81 (137)
408 cd05126 Mth938 Mth938 domain. 47.2 71 0.0015 24.9 5.9 48 178-226 45-92 (117)
409 TIGR02026 BchE magnesium-proto 46.9 58 0.0012 32.4 6.7 53 178-231 49-103 (497)
410 KOG1546 Metacaspase involved i 46.7 1.6E+02 0.0034 27.5 8.7 113 96-213 89-216 (362)
411 PF13378 MR_MLE_C: Enolase C-t 46.4 38 0.00083 25.7 4.4 50 178-227 4-53 (111)
412 cd02072 Glm_B12_BD B12 binding 45.3 81 0.0017 25.1 6.0 49 179-227 37-88 (128)
413 PRK13396 3-deoxy-7-phosphohept 45.0 48 0.001 31.3 5.5 57 178-234 218-285 (352)
414 COG0552 FtsY Signal recognitio 43.8 30 0.00065 32.3 3.8 84 178-267 208-305 (340)
415 TIGR00629 uvde UV damage endon 43.5 26 0.00055 32.5 3.3 33 198-230 190-222 (312)
416 COG3010 NanE Putative N-acetyl 41.9 66 0.0014 27.9 5.3 71 178-254 85-156 (229)
417 PF00128 Alpha-amylase: Alpha 41.7 20 0.00044 32.4 2.5 28 201-228 46-73 (316)
418 PRK09441 cytoplasmic alpha-amy 40.9 26 0.00057 34.6 3.3 28 201-228 75-102 (479)
419 PF04914 DltD_C: DltD C-termin 40.6 51 0.0011 26.3 4.3 49 180-229 37-97 (130)
420 smart00481 POLIIIAc DNA polyme 40.0 1.2E+02 0.0025 20.5 6.3 46 177-224 13-58 (67)
421 TIGR01501 MthylAspMutase methy 40.0 1E+02 0.0022 24.7 5.9 43 179-221 39-81 (134)
422 PF02571 CbiJ: Precorrin-6x re 39.8 30 0.00065 31.0 3.1 92 112-224 3-97 (249)
423 COG0296 GlgB 1,4-alpha-glucan 39.0 31 0.00067 35.2 3.4 31 199-229 205-236 (628)
424 COG1105 FruK Fructose-1-phosph 38.9 67 0.0015 29.8 5.3 52 178-230 110-169 (310)
425 PF03652 UPF0081: Uncharacteri 38.4 1.2E+02 0.0026 24.2 6.2 54 177-230 36-98 (135)
426 cd03315 MLE_like Muconate lact 37.1 80 0.0017 28.3 5.6 50 177-226 188-237 (265)
427 TIGR01361 DAHP_synth_Bsub phos 37.0 1.1E+02 0.0025 27.5 6.5 55 178-232 142-206 (260)
428 cd03319 L-Ala-DL-Glu_epimerase 36.5 66 0.0014 29.7 5.1 50 177-226 236-285 (316)
429 PRK13601 putative L7Ae-like ri 36.4 96 0.0021 22.5 4.8 45 182-228 14-58 (82)
430 PRK13602 putative ribosomal pr 36.1 90 0.0019 22.6 4.6 45 181-227 16-60 (82)
431 COG1954 GlpP Glycerol-3-phosph 35.7 64 0.0014 27.0 4.1 48 180-231 12-61 (181)
432 TIGR01470 cysG_Nterm siroheme 35.6 1.7E+02 0.0036 25.3 7.1 95 108-228 8-103 (205)
433 PRK12595 bifunctional 3-deoxy- 35.2 94 0.002 29.5 5.9 54 179-232 236-299 (360)
434 COG0816 Predicted endonuclease 34.7 1.3E+02 0.0029 24.3 5.8 50 179-228 40-97 (141)
435 PRK09590 celB cellobiose phosp 34.5 71 0.0015 24.3 4.0 57 194-254 3-59 (104)
436 COG2877 KdsA 3-deoxy-D-manno-o 34.5 68 0.0015 28.4 4.3 40 192-232 159-202 (279)
437 PRK08057 cobalt-precorrin-6x r 34.4 39 0.00084 30.3 3.0 90 112-224 5-96 (248)
438 cd02071 MM_CoA_mut_B12_BD meth 34.4 1.4E+02 0.003 23.2 5.9 49 179-227 37-88 (122)
439 TIGR02370 pyl_corrinoid methyl 33.6 1.8E+02 0.0039 24.8 6.9 51 178-228 121-175 (197)
440 PRK13397 3-deoxy-7-phosphohept 33.3 1.1E+02 0.0024 27.5 5.6 56 178-233 132-197 (250)
441 TIGR00640 acid_CoA_mut_C methy 33.2 1.8E+02 0.0038 23.2 6.3 47 179-225 40-89 (132)
442 PF14871 GHL6: Hypothetical gl 33.0 1.8E+02 0.0039 23.2 6.3 46 180-225 1-62 (132)
443 COG1648 CysG Siroheme synthase 32.5 88 0.0019 27.2 4.8 36 107-143 10-45 (210)
444 PF02571 CbiJ: Precorrin-6x re 32.2 88 0.0019 28.0 4.9 22 208-229 117-140 (249)
445 PF14639 YqgF: Holliday-juncti 31.6 58 0.0013 26.7 3.4 42 179-220 50-91 (150)
446 COG1137 YhbG ABC-type (unclass 31.5 1.1E+02 0.0023 26.8 4.9 43 183-226 149-196 (243)
447 COG2099 CobK Precorrin-6x redu 31.3 93 0.002 27.9 4.7 23 208-230 54-76 (257)
448 cd05564 PTS_IIB_chitobiose_lic 31.1 1.1E+02 0.0023 22.8 4.5 54 195-254 2-55 (96)
449 cd02069 methionine_synthase_B1 30.7 1.9E+02 0.0041 25.2 6.6 50 178-227 125-176 (213)
450 cd00248 Mth938-like Mth938-lik 30.4 2.5E+02 0.0054 21.4 7.0 53 178-232 38-92 (109)
451 PF01248 Ribosomal_L7Ae: Ribos 30.1 1.3E+02 0.0028 22.1 4.8 46 181-228 20-66 (95)
452 TIGR00715 precor6x_red precorr 29.9 2.3E+02 0.0051 25.4 7.3 94 112-224 3-96 (256)
453 PLN00196 alpha-amylase; Provis 29.9 51 0.0011 32.1 3.2 27 202-228 87-113 (428)
454 TIGR00250 RNAse_H_YqgF RNAse H 29.8 1.8E+02 0.0039 23.1 5.9 53 178-230 34-94 (130)
455 PRK06806 fructose-bisphosphate 29.3 1.9E+02 0.0041 26.4 6.6 51 179-230 85-138 (281)
456 PF02603 Hpr_kinase_N: HPr Ser 29.1 80 0.0017 24.9 3.7 38 184-226 74-111 (127)
457 TIGR01060 eno phosphopyruvate 28.8 1.4E+02 0.0031 29.0 6.1 45 180-224 317-361 (425)
458 PRK00109 Holliday junction res 28.8 2E+02 0.0043 23.1 6.0 53 179-231 41-101 (138)
459 KOG3974 Predicted sugar kinase 28.6 78 0.0017 28.5 3.7 45 180-227 91-139 (306)
460 cd02065 B12-binding_like B12 b 28.4 2.7E+02 0.0058 21.1 6.9 52 180-231 38-91 (125)
461 TIGR00789 flhB_rel flhB C-term 28.2 51 0.0011 24.0 2.2 20 209-228 29-48 (82)
462 PRK06683 hypothetical protein; 28.0 1.5E+02 0.0032 21.5 4.6 44 182-227 17-60 (82)
463 COG0373 HemA Glutamyl-tRNA red 27.6 5.8E+02 0.013 24.8 11.0 56 178-240 226-281 (414)
464 COG3414 SgaB Phosphotransferas 27.6 1E+02 0.0022 23.0 3.8 70 194-269 3-75 (93)
465 TIGR01362 KDO8P_synth 3-deoxy- 27.6 1.4E+02 0.003 26.9 5.2 55 177-232 125-187 (258)
466 PLN03244 alpha-amylase; Provis 27.3 62 0.0014 34.0 3.4 29 201-229 435-463 (872)
467 PRK05583 ribosomal protein L7A 27.0 1.7E+02 0.0037 22.2 5.1 44 181-226 22-65 (104)
468 PRK12457 2-dehydro-3-deoxyphos 27.0 1.6E+02 0.0034 26.9 5.5 55 178-232 140-203 (281)
469 cd00308 enolase_like Enolase-s 26.7 1.6E+02 0.0035 25.6 5.6 49 178-226 154-202 (229)
470 cd05560 Xcc1710_like Xcc1710_l 26.5 2.6E+02 0.0055 21.4 6.0 54 178-233 39-93 (109)
471 PF04273 DUF442: Putative phos 26.1 1.7E+02 0.0038 22.4 5.0 47 177-224 13-61 (110)
472 COG1087 GalE UDP-glucose 4-epi 26.0 4.4E+02 0.0095 24.5 8.1 95 112-222 3-111 (329)
473 PRK00077 eno enolase; Provisio 26.0 1.9E+02 0.0041 28.1 6.4 45 180-224 316-360 (425)
474 COG2876 AroA 3-deoxy-D-arabino 25.8 1.6E+02 0.0036 26.6 5.3 56 179-234 163-228 (286)
475 PRK01018 50S ribosomal protein 25.8 1.7E+02 0.0038 21.9 4.8 43 181-225 21-63 (99)
476 PRK07714 hypothetical protein; 25.5 1.9E+02 0.0042 21.6 5.1 44 181-226 23-66 (100)
477 COG0108 RibB 3,4-dihydroxy-2-b 25.5 1.2E+02 0.0027 26.0 4.3 34 192-225 156-190 (203)
478 KOG0630 Predicted pyridoxal-de 25.3 2.1E+02 0.0045 28.4 6.2 92 177-269 272-375 (838)
479 TIGR03586 PseI pseudaminic aci 25.1 1.9E+02 0.0042 27.0 6.0 55 177-233 142-205 (327)
480 PF04309 G3P_antiterm: Glycero 25.1 14 0.0003 31.1 -1.4 44 184-231 12-57 (175)
481 TIGR03677 rpl7ae 50S ribosomal 25.1 1.8E+02 0.0038 22.6 4.9 46 181-227 31-76 (117)
482 cd03320 OSBS o-Succinylbenzoat 25.0 1.1E+02 0.0024 27.4 4.4 49 178-226 185-233 (263)
483 TIGR03573 WbuX N-acetyl sugar 24.9 3E+02 0.0065 25.8 7.4 23 208-230 148-170 (343)
484 PRK10785 maltodextrin glucosid 24.9 67 0.0015 32.8 3.2 49 180-228 177-247 (598)
485 PTZ00106 60S ribosomal protein 24.7 1.6E+02 0.0034 22.6 4.5 43 182-226 31-73 (108)
486 PLN00191 enolase 24.5 2.1E+02 0.0045 28.3 6.3 47 179-225 347-393 (457)
487 TIGR01928 menC_lowGC/arch o-su 24.5 1.9E+02 0.0041 26.8 6.0 50 177-226 231-280 (324)
488 PLN02361 alpha-amylase 24.5 75 0.0016 30.7 3.2 27 202-228 71-97 (401)
489 PRK04175 rpl7ae 50S ribosomal 24.5 2E+02 0.0043 22.6 5.1 47 181-228 35-81 (122)
490 TIGR00196 yjeF_cterm yjeF C-te 24.2 1.4E+02 0.0031 26.8 4.9 45 181-228 83-127 (272)
491 PLN03033 2-dehydro-3-deoxyphos 24.2 2.4E+02 0.0051 25.8 6.1 54 177-231 139-200 (290)
492 TIGR01502 B_methylAsp_ase meth 24.1 2.1E+02 0.0045 27.7 6.2 52 176-227 304-355 (408)
493 TIGR01927 menC_gamma/gm+ o-suc 23.9 1.6E+02 0.0035 27.1 5.3 49 178-226 215-263 (307)
494 PTZ00081 enolase; Provisional 23.8 2.2E+02 0.0047 27.9 6.3 46 180-225 336-381 (439)
495 COG1435 Tdk Thymidine kinase [ 23.8 3.5E+02 0.0076 23.4 6.7 88 125-225 24-115 (201)
496 cd03316 MR_like Mandelate race 23.8 1.5E+02 0.0033 27.7 5.3 50 177-226 248-297 (357)
497 PRK08057 cobalt-precorrin-6x r 23.8 3.1E+02 0.0068 24.5 6.9 22 208-229 116-137 (248)
498 TIGR00160 MGSA methylglyoxal s 23.6 2.1E+02 0.0045 23.3 5.1 48 182-229 63-113 (143)
499 PF00926 DHBP_synthase: 3,4-di 23.6 1.7E+02 0.0037 25.1 4.9 34 192-225 152-186 (194)
500 PRK09505 malS alpha-amylase; R 23.5 78 0.0017 32.9 3.3 25 204-228 289-313 (683)
No 1
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-45 Score=331.21 Aligned_cols=275 Identities=51% Similarity=0.820 Sum_probs=260.6
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~ 104 (356)
..+...++++++.+.++..+|++.|+|+++||++++.|++++...+.++|++|||+.|||+|++..+++|+.+.++.+++
T Consensus 5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 45567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccc-CCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHH
Q 018401 105 FRLDPEKWGG-SLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 183 (356)
Q Consensus 105 ~g~~~~~v~v-~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~ 183 (356)
||++..+ + +.||+.||.+++.++++|||+|+-.+..|++|++++. .+.+.|..++.++++++.+++.+|+|+
T Consensus 85 Fga~~an--VQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~-----~v~~sG~~~~~v~Y~vd~et~~IDyD~ 157 (413)
T COG0112 85 FGAEYAN--VQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS-----PVNFSGKLFNVVSYGVDPETGLIDYDE 157 (413)
T ss_pred hCCCccc--cCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC-----CCCccceeEEeEecccccccCccCHHH
Confidence 9998764 5 8899999999999999999999999999999999886 566778889999999998889999999
Q ss_pred HHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCce
Q 018401 184 LEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 263 (356)
Q Consensus 184 l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG 263 (356)
+++.+.+++||+|++..|.++...|++++.++|++.|+++++|.||.+|++..++.++|+..+|++++|+||+|.||+||
T Consensus 158 ~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPrGG 237 (413)
T COG0112 158 VEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPRGG 237 (413)
T ss_pred HHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCCce
Confidence 99999988999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 264 MIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 264 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+|+++++ ++.++++...+|+.+|.|..+.++|.+.|+.+..+.
T Consensus 238 ~Il~~~e-------------el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p 280 (413)
T COG0112 238 IILTNDE-------------ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEP 280 (413)
T ss_pred EEEeccH-------------HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcCh
Confidence 9999985 799999999999999999999999999999999875
No 2
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-44 Score=318.22 Aligned_cols=303 Identities=76% Similarity=1.186 Sum_probs=283.6
Q ss_pred CCchhhhcccccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHH
Q 018401 17 VTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (356)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (356)
..+.++++..+...||++++.+..++.+|+.+|.|+++||+++..|++++...+.+.|.+|||+.|||+|++.++++|..
T Consensus 11 ~~~~~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~L 90 (477)
T KOG2467|consen 11 AAVIKLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELL 90 (477)
T ss_pred hhhhhhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHH
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcccc---CCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 97 CQKRALEAFRLDPEKWGG---SLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 97 ~~~~la~~~g~~~~~v~v---~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
++++..+.|+++|+.|-| +-||+-||.++..++++|+|+|+-.+..+++|++++|......+....+-++..||.++
T Consensus 91 Cq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~ 170 (477)
T KOG2467|consen 91 CQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVD 170 (477)
T ss_pred HHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeC
Confidence 999999999999987765 78999999999999999999999999999999999998877778888888999999999
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 174 ESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
+.++.+|+|.|++.....++|+|+...|.+...+|..++.++|.+.|+++++|.||..|.+..++.++||+.+|++++++
T Consensus 171 ~~TG~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTT 250 (477)
T KOG2467|consen 171 PSTGYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTT 250 (477)
T ss_pred CCCCceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeeccc
Confidence 88899999999999888899999998888999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCceEEEEecCcchhc-cCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 254 HKSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 254 ~K~l~gp~gG~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
||+|.||+||+|+++++.+... ..|..+.|++.++++.+.||+.+|.|..+.|+|++.||++...+
T Consensus 251 HKsLRGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tp 317 (477)
T KOG2467|consen 251 HKSLRGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTP 317 (477)
T ss_pred cccccCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCH
Confidence 9999999999999999887664 44777778999999999999999999999999999999999875
No 3
>PLN02271 serine hydroxymethyltransferase
Probab=100.00 E-value=5.9e-43 Score=334.87 Aligned_cols=303 Identities=58% Similarity=0.954 Sum_probs=263.4
Q ss_pred CCchhhhcccccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHH
Q 018401 17 VTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (356)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (356)
..+.++.++.+...||++++.+.++.++|++.|+|+++||++++.|++++...+.++|++|||+.|||+|++..+++|..
T Consensus 119 ~~~~~~~~~~l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~l 198 (586)
T PLN02271 119 AAVRAWGNQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERL 198 (586)
T ss_pred HHHHHHHhccHhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHH
Confidence 33444555678889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcc--cc-CCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccc-ccccccceeeEEEeccc
Q 018401 97 CQKRALEAFRLDPEKW--GG-SLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRL 172 (356)
Q Consensus 97 ~~~~la~~~g~~~~~v--~v-~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~ 172 (356)
+.++..++||+++++| -| +-||+.||.+++.++++|||+|+..+.+|++|+++++.... ..+...|..++.++|++
T Consensus 199 a~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~ 278 (586)
T PLN02271 199 CCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKV 278 (586)
T ss_pred HHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccc
Confidence 9999999999987443 24 77999999999999999999999999999999998764321 24556777788899888
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 173 NESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 173 ~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
+.+++.+|++++++.+...+||+|+++.+.++...|+++|+++|+++|+++++|+||.+|.++.+..+.|+.++|+++++
T Consensus 279 d~~~g~IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~T 358 (586)
T PLN02271 279 NPQTGYIDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTST 358 (586)
T ss_pred ccccCccCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeC
Confidence 76778999999999655569999999877778899999999999999999999999999999999888888889999999
Q ss_pred CCCcCCCCCceEEEEecCcchhccCCcc------hhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 253 THKSLRGPRGAMIFFRKGVKEINKQGKE------VFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 253 ~~K~l~gp~gG~l~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+||||.||+||++++++++++...++.. ..+++.++++...+|+..|+|....++|++.|++++...
T Consensus 359 THKtLrGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~ 431 (586)
T PLN02271 359 THKSLRGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATP 431 (586)
T ss_pred CcccCCCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhCh
Confidence 9999999999999998876554333321 234678889999999888888888899999999998764
No 4
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=100.00 E-value=9.7e-43 Score=325.93 Aligned_cols=293 Identities=55% Similarity=0.923 Sum_probs=233.1
Q ss_pred ccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC
Q 018401 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR 106 (356)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g 106 (356)
|+..|+++++.+.++.++|++.|+|+++||+++|.|++++...+.++|++|+|+.|||+|++..+++|+.+.++++++||
T Consensus 1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~ 80 (399)
T PF00464_consen 1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG 80 (399)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccc---CCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHH
Q 018401 107 LDPEKWGG---SLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 183 (356)
Q Consensus 107 ~~~~~v~v---~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~ 183 (356)
+++++|.+ +.||+.||.+++.++++|||+|+..++.+++|++.+.......+...|..+..++++++++++.+|+++
T Consensus 81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~ 160 (399)
T PF00464_consen 81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDE 160 (399)
T ss_dssp -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHH
T ss_pred CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHH
Confidence 99766553 789999999999999999999999999999999988865554555577778889999997888999999
Q ss_pred HHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCce
Q 018401 184 LEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 263 (356)
Q Consensus 184 l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG 263 (356)
+++.+.+++||+|+++.|+++...|++++.++|++.|+++++|.+|.+|.+..++.++|+.++|++++|+||+|.||+||
T Consensus 161 l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrgg 240 (399)
T PF00464_consen 161 LEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRGG 240 (399)
T ss_dssp HHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-E
T ss_pred HHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCce
Confidence 99999988999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 264 MIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 264 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+|+++++.+.....+.....++.++++...+|+.+|+|....++|++.|+.++...
T Consensus 241 iI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~ 296 (399)
T PF00464_consen 241 IILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSP 296 (399)
T ss_dssp EEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSH
T ss_pred EEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCH
Confidence 99999554333223332233789999999999999999999999999999998764
No 5
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=3e-40 Score=320.60 Aligned_cols=307 Identities=77% Similarity=1.180 Sum_probs=258.3
Q ss_pred hccCCCchhhhcccccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHH
Q 018401 13 EKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 92 (356)
||.-++.+++.++.+...||++++.+.++..+|++.|+|+++||++++.|++++...+.++|++|+++.|+|+|+...++
T Consensus 1 ~~~~~~~~~~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~ 80 (475)
T PLN03226 1 EKSMVSVPKWGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQ 80 (475)
T ss_pred CcchhhhhhcchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHH
Confidence 45567788888888999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcccc---CCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEe
Q 018401 93 AESLCQKRALEAFRLDPEKWGG---SLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 169 (356)
Q Consensus 93 l~~~~~~~la~~~g~~~~~v~v---~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 169 (356)
+++.++++.+++|+.+.+.+.+ +.||+.+|.+++.++++|||+|+..+..+++++...+......+...+..+..++
T Consensus 81 lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~ 160 (475)
T PLN03226 81 IETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMP 160 (475)
T ss_pred HHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeee
Confidence 9999999999999998766544 6899999999999999999999998888888877554322222333444455567
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEE
Q 018401 170 YRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVV 249 (356)
Q Consensus 170 ~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~ 249 (356)
+.++.+++.+|+++|++++.+.++++|+++.+++|...|+++|.++|+++|+++++|+||++|.++.+....+++++|++
T Consensus 161 y~~~~~~g~iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div 240 (475)
T PLN03226 161 YRLDESTGLIDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVV 240 (475)
T ss_pred eeecCCCCCcCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEE
Confidence 77776678999999999987667888877677799999999999999999999999999999999888777777789999
Q ss_pred EeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 250 TTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 250 ~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
++++||||+||.||+++++++..+...+|...++++.+.++...++...|+++.+.++|+.+|++++.+.
T Consensus 241 ~~t~hK~L~GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~ 310 (475)
T PLN03226 241 TTTTHKSLRGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTP 310 (475)
T ss_pred EecCcccccCCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCc
Confidence 9999999999999999998765444444444444555566666667767889999999999999999864
No 6
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=3.9e-38 Score=306.52 Aligned_cols=284 Identities=66% Similarity=1.104 Sum_probs=237.1
Q ss_pred cccccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHH
Q 018401 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (356)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~ 103 (356)
+..++..|+++++.+.++...+++.|+|+++||.+||.|++++...+.+.|++|+|+++|+.|....+.+++.+|+.+++
T Consensus 12 ~~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~ 91 (452)
T PTZ00094 12 NQSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALE 91 (452)
T ss_pred hhhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHH
Confidence 34478889999999999888889999999999999999999999999988999999999999999999998789999999
Q ss_pred HcCCCCCccccC---CCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCC
Q 018401 104 AFRLDPEKWGGS---LSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 180 (356)
Q Consensus 104 ~~g~~~~~v~v~---~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 180 (356)
+||++++++.++ +||+++|.+++.+++++||+|++.+.+|++++.++....+......+..+..++++++ .++.+|
T Consensus 92 lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~-~~g~id 170 (452)
T PTZ00094 92 AFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVN-EKGLID 170 (452)
T ss_pred HhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccC-CCCCcC
Confidence 999988776554 7899999988999999999999999999999988754332222233333444555666 348899
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCC
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 260 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp 260 (356)
+++|++++.+.++++++++.+++|...|+++|.++|+++|+++++|++|++|.++.++.+.++.++|++++|+||||+||
T Consensus 171 ~~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP 250 (452)
T PTZ00094 171 YDKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGP 250 (452)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCC
Confidence 99999999765788887766679999999999999999999999999999999998876666668999999999999999
Q ss_pred CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 261 RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 261 ~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
.||+++++++... .+...+....++...|+++...++|+.+|++++.+
T Consensus 251 ~Gg~l~~~~~~~~----------~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~ 298 (452)
T PTZ00094 251 RSGLIFYRKKVKP----------DIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQS 298 (452)
T ss_pred CceEEEEecccch----------HHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhC
Confidence 9999998774211 12333444455666689999999999999999965
No 7
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=7.2e-38 Score=299.15 Aligned_cols=272 Identities=36% Similarity=0.640 Sum_probs=239.2
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~ 104 (356)
..+...||+++..+.++.++|++.|+|+++||++++.|++++...+.++|++|||+.+||+|++..++++..+.++.+++
T Consensus 28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l 107 (493)
T PRK13580 28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL 107 (493)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence 44678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccc-CCCchHHHHHHHHhhcCC-------------------------------CCeeeecCCCCCcccCcccc
Q 018401 105 FRLDPEKWGG-SLSGSPSNFQVYTALLKP-------------------------------HDRIMALDLPHGGHLSHGYQ 152 (356)
Q Consensus 105 ~g~~~~~v~v-~~sgs~a~~~~l~al~~~-------------------------------gd~Vl~~~~~~~~~~~~~~~ 152 (356)
||++..+ + +-||+.||.+++.++++| ||+|+..+..+++++..++
T Consensus 108 f~a~~an--vqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~- 184 (493)
T PRK13580 108 FGAEHAY--VQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGF- 184 (493)
T ss_pred hCCCccc--ccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCc-
Confidence 9998864 5 889999999999999977 8999999999999998875
Q ss_pred cccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCCcccHHHHHHHHHHcCCEEEEeccchh
Q 018401 153 TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYARLYDYERIRKVCNKQKAIMLADMAHIS 231 (356)
Q Consensus 153 ~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~ 231 (356)
...+.+..+..++++++.+++.+|++++++.+.+ +++.|+++ .+|++...|+++|.++|+++|+++++|+||++
T Consensus 185 ----~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~-~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH~~ 259 (493)
T PRK13580 185 ----RPNISGKMFHQRSYGVDPDTGLLDYDEIAALARE-FKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHFA 259 (493)
T ss_pred ----ccchhhheeeeEecccCcccCccCHHHHHHHHhh-cCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECchhh
Confidence 3445666677777888866789999999999988 55666665 88888888999999999999999999999999
Q ss_pred hhcccCCCC---CCCCCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHH
Q 018401 232 GLVAAGVIP---SPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITG 308 (356)
Q Consensus 232 g~~~~~~~~---~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a 308 (356)
|+++.+... .++.++|++++|+||+|+||.||++++++ ++.++++.. .|..+|++..+.++|
T Consensus 260 Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~--------------~l~~~L~~a-~P~i~gg~l~p~iAA 324 (493)
T PRK13580 260 GLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKK--------------EYADAVDKG-CPLVLGGPLPHVMAA 324 (493)
T ss_pred ceeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecH--------------HHHHHHhhC-CCcccCCCccHHHHH
Confidence 999866633 34557999999999999999999999987 567777554 477889999999999
Q ss_pred HHHHHHHHhcc
Q 018401 309 LAVALKQVCTL 319 (356)
Q Consensus 309 l~~Al~~~~~~ 319 (356)
+..++.++.++
T Consensus 325 ~avAl~e~~~~ 335 (493)
T PRK13580 325 KAVALAEARTP 335 (493)
T ss_pred HHHHHHHHhCc
Confidence 99999988753
No 8
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.9e-35 Score=278.93 Aligned_cols=288 Identities=21% Similarity=0.218 Sum_probs=218.3
Q ss_pred Ceee-cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCC-CccccCCCchHHHHHHH
Q 018401 49 LELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP-EKWGGSLSGSPSNFQVY 126 (356)
Q Consensus 49 i~L~-~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~-~~v~v~~sgs~a~~~~l 126 (356)
+-|. +.....|..|++++.++....+ .+.++-.+.......+..+++|+.+++++|+++ ++|+||.++|+++..+.
T Consensus 24 vylD~aa~~~~p~~V~~a~~~~~~~~~--an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va 101 (405)
T COG0520 24 VYLDNAATSQKPQAVLDAVAEYYRRYN--ANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVA 101 (405)
T ss_pred EEecCcccccCCHHHHHHHHHHHHhhc--CCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHH
Confidence 3443 3344579999999999886533 233321112223345567789999999999985 88888999998777677
Q ss_pred Hhh---cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 127 TAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 127 ~al---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
.++ +++||+|++++.+|+++..||....++ .|.+++.+ +++ +++.++.+++++.+++ +||+|.++ .||
T Consensus 102 ~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~----~Ga~v~~i--~~~-~~g~~~~~~~~~~i~~-~Tklvais~vSn 173 (405)
T COG0520 102 RGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKR----TGAKVRVI--PLD-DDGLLDLDALEKLITP-KTKLVALSHVSN 173 (405)
T ss_pred HHhhhhhcCCCEEEEccCcchhhHHHHHHHHHh----cCcEEEEE--ecC-CCCCcCHHHHHHhcCC-CceEEEEECccc
Confidence 777 699999999999999999999854432 36667777 455 5689999999998887 99999999 777
Q ss_pred -CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcc----hhcc
Q 018401 203 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK----EINK 276 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~----~~~~ 276 (356)
+|.+.|+++|+++||++|+++++|++|++|+.+++++.++ +|++++|+||||+||.| |++++++++. |...
T Consensus 174 ~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~---~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~ 250 (405)
T COG0520 174 VTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELG---CDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLG 250 (405)
T ss_pred cccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcC---CCEEEEcccccccCCCceEEEEEchHHHhhcCCccc
Confidence 8999999999999999999999999999999999999888 99999999999999999 9999999763 2233
Q ss_pred CCcchhhhHH-HhhccccCCCCC--CCCcHHHHHHHHHHHHHHhcccccchhhcccccc--h-HHHHhhhcccccccccc
Q 018401 277 QGKEVFYDYE-EKINQAVFPGLQ--GGPHNHTITGLAVALKQVCTLITFSHIHVFSLHV--Y-PAFVSNQNNSENIEEDK 350 (356)
Q Consensus 277 ~g~~~~~~~~-~~~~~~~~~~~~--gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~ 350 (356)
+|+.+.+... ........+.++ |||++.++.++.+|++++++ .+++.++++..++ | ...+++..+.++++...
T Consensus 251 gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~-ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~ 329 (405)
T COG0520 251 GGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLE-IGMEAIEAHERELTEYLLEGLSELPGVEIYGPPD 329 (405)
T ss_pred CCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc
Confidence 4433321111 112222334444 99999999999999999987 4566666554444 3 33366666677776543
No 9
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=9.6e-33 Score=265.72 Aligned_cols=278 Identities=50% Similarity=0.786 Sum_probs=220.8
Q ss_pred hhcccccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHH
Q 018401 22 QLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (356)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 101 (356)
++++.++.+|+++++.++++...+++.|+|.+++|+++|.|++++...+.++|..|++++++++|++....+++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~l 83 (416)
T PRK13034 4 FFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERA 83 (416)
T ss_pred hhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHH
Confidence 56788899999999999999888899999999999999999999999976668888999999999888899987788899
Q ss_pred HHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCH
Q 018401 102 LEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 181 (356)
Q Consensus 102 a~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~ 181 (356)
++++|.+.. .++++||+.|+..++.++++|||+|++++..|.+++..+.. ....+..+..+.++++..++.+|+
T Consensus 84 a~l~g~~~a-lv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~d~ 157 (416)
T PRK13034 84 KQLFGCDYA-NVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAK-----VSLSGKWYNAVQYGVDRLTGLIDY 157 (416)
T ss_pred HHHhCCCce-EEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCc-----ceeccceeeeEEcccccccCCcCH
Confidence 999999854 12378999999999999999999999999988875332221 111122222234455544567899
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCC
Q 018401 182 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR 261 (356)
Q Consensus 182 ~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~ 261 (356)
+++++.+...++++|+++.+.+|...|+++|.++|+++|+++++|+||++|.+..+....++.++|++++|+||+|+||.
T Consensus 158 ~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~ 237 (416)
T PRK13034 158 DEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPR 237 (416)
T ss_pred HHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCC
Confidence 99999886557888888655688888999999999999999999999999998776655555579999999999999999
Q ss_pred ceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 262 GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 262 gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
||+++++++ .+...++...+++..++++.+.++++..++.++.+
T Consensus 238 GG~v~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~ 281 (416)
T PRK13034 238 GGMILTNDE-------------EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQ 281 (416)
T ss_pred CeEEEECcH-------------HHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhC
Confidence 998888763 34444444444444455667777877777777654
No 10
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-33 Score=259.42 Aligned_cols=272 Identities=17% Similarity=0.225 Sum_probs=212.5
Q ss_pred cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHh--hc
Q 018401 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTA--LL 130 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~a--l~ 130 (356)
+...|+.|+|+++|..++...| |+|++-|..|.. ...+-+++|+.+|+++|+++.+|+||++||+++.+++.+ ..
T Consensus 8 ~ATTp~~~~v~~~m~~~~~~~f--gNPsS~H~~G~~-A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a 84 (386)
T COG1104 8 AATTPVDPEVLEAMLPYLTEVF--GNPSSLHSFGRE-ARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALA 84 (386)
T ss_pred cccCCCCHHHHHHHHHHHHhhc--CCccchhHhHHH-HHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHh
Confidence 4455889999999999998866 888775554433 344556899999999999999999999999988878876 22
Q ss_pred ----CCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 131 ----KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 131 ----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
+.|.+|+++..||.+++.++..+.+ .|.++..+ +++ .++.+|+++|++++.+ +|.+|.+. .+| +|
T Consensus 85 ~~~~~~~~HIIts~iEH~aVl~~~~~Le~-----~g~~Vtyl--~V~-~~G~v~~e~L~~al~~-~T~LVSim~aNnE~G 155 (386)
T COG1104 85 YRNAQKGKHIITSAIEHPAVLNTCRYLER-----QGFEVTYL--PVD-SNGLVDLEQLEEALRP-DTILVSIMHANNETG 155 (386)
T ss_pred hhcccCCCeEEEcccccHHHHHHHHHHHh-----cCCeEEEe--CCC-CCCeEcHHHHHHhcCC-CceEEEEEecccCee
Confidence 2578999999999999987775533 24445445 566 5789999999999997 88888887 666 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcc--hhccCCcch
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINKQGKEV 281 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~--~~~~~g~~~ 281 (356)
+++|+++|.++|+++|+++++|++|++|.+|+++..++ +|++++|+|| |+||+| |+++++++.+ +.+.||++
T Consensus 156 ~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~---vD~ls~SaHK-~~GpkGiGaLyv~~~~~~~p~i~GGgQ- 230 (386)
T COG1104 156 TIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEELG---VDLLSFSAHK-FGGPKGIGALYVRPGVRLEPLIHGGGQ- 230 (386)
T ss_pred ecccHHHHHHHHHHcCCeEEEehhhhcCceeccccccC---cceEEeehhh-ccCCCceEEEEECCCCccCceeccCcC-
Confidence 99999999999999999999999999999999998888 9999999999 899999 9999988653 45667765
Q ss_pred hhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccch--HHHHhhhccccccccccCC
Q 018401 282 FYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVY--PAFVSNQNNSENIEEDKGR 352 (356)
Q Consensus 282 ~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 352 (356)
+ ...+.||.|+++++|+..|++...++...+..|...|+.. ..+........+-++...|
T Consensus 231 --E---------~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~r 292 (386)
T COG1104 231 --E---------RGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPR 292 (386)
T ss_pred --C---------CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccC
Confidence 2 2345699999999999999999987654444443344332 2222222455555554333
No 11
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=1.4e-31 Score=258.67 Aligned_cols=275 Identities=54% Similarity=0.830 Sum_probs=212.4
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~ 104 (356)
..+++.||++++.++++...++..++|.+++|++|+.|++++...+.+.|..++++++++.+....+.+++.+++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~ 83 (416)
T PRK00011 4 DNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKEL 83 (416)
T ss_pred hhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 34589999999999988777889999999999999999999988876667667888888777777777877788999999
Q ss_pred cCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHH
Q 018401 105 FRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQL 184 (356)
Q Consensus 105 ~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l 184 (356)
+|+++++++ +++|+.++..++.++++|||+|+++.++|+++...+.... ....|.++ +.++++.+++.+|++++
T Consensus 84 ~g~~~~~i~-~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~---~~~~g~~~--~~~~~~~~~~~~d~~~l 157 (416)
T PRK00011 84 FGAEYANVQ-PHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVN---FSGKLYNV--VSYGVDEETGLIDYDEV 157 (416)
T ss_pred hCCCceeee-cCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccc---cccceeeE--eecCcCcccCCcCHHHH
Confidence 999876544 4567888888899999999999999999988765443111 11123334 44455534578999999
Q ss_pred HHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCceE
Q 018401 185 EKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAM 264 (356)
Q Consensus 185 ~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~ 264 (356)
++++++.++++|+++.+++|...|+++|.++|+++|+++|+|++|+.|....+..+..+.++|++++|+||+|+||+||+
T Consensus 158 ~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g~~gg~ 237 (416)
T PRK00011 158 EKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRGPRGGL 237 (416)
T ss_pred HHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCCCCceE
Confidence 99997557999998766788888999999999999999999999998876433222223358999999999999999999
Q ss_pred EEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 265 IFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 265 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++++++ ++.+.+.....++..+++....++++..|+..+.+
T Consensus 238 i~~~~~-------------~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~ 278 (416)
T PRK00011 238 ILTNDE-------------ELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALE 278 (416)
T ss_pred EEeCCH-------------HHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHh
Confidence 998653 45555554444555567777788887777766543
No 12
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=2.2e-31 Score=256.16 Aligned_cols=273 Identities=59% Similarity=0.917 Sum_probs=215.4
Q ss_pred ccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC
Q 018401 29 VVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD 108 (356)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~ 108 (356)
+++++++..+.++...+++.++|.+++++++|.|++++...+...|..++++.++|.+....+.+++.+++.+++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~ 81 (402)
T cd00378 2 DVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE 81 (402)
T ss_pred CcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 57899999999987778899999999999999999999988766677788888989888888899888889999999998
Q ss_pred CCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHh
Q 018401 109 PEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 188 (356)
Q Consensus 109 ~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i 188 (356)
...+ +++||++++..++.++++|||+|++++++|+++...+... .+...|.++..++++.+.+++.+|++++++++
T Consensus 82 ~~~v-~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i 157 (402)
T cd00378 82 YANV-QPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFT---KVSASGKLFESVPYGVDPETGLIDYDALEKMA 157 (402)
T ss_pred ceee-ecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccc---cccccceeEEEecCCcCcccCCcCHHHHHHHH
Confidence 7644 3446788988899999999999999999998876544321 13345665656655544235789999999998
Q ss_pred hhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCceEEEEe
Q 018401 189 TLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFR 268 (356)
Q Consensus 189 ~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~ 268 (356)
.+.++++++++.+++|...|+++|.++|+++|+++|+|++|+.|.+..+....++.++|++++|+||+|.||+||+++++
T Consensus 158 ~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~i~~~ 237 (402)
T cd00378 158 LEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGLILTR 237 (402)
T ss_pred HhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceEEEec
Confidence 65589999988667788889999999999999999999999887654332222223589999999999999999888887
Q ss_pred cCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 269 KGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 269 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++ ++.+.+.....+...++++...++++..|+..+..
T Consensus 238 ~~-------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 274 (402)
T cd00378 238 KG-------------ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALE 274 (402)
T ss_pred cH-------------HHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhh
Confidence 63 34555544334455677777788888888876654
No 13
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.96 E-value=4.3e-29 Score=237.80 Aligned_cols=280 Identities=19% Similarity=0.204 Sum_probs=201.4
Q ss_pred ecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCC-CccccCCCchHHHHHHHHhh-
Q 018401 52 IPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP-EKWGGSLSGSPSNFQVYTAL- 129 (356)
Q Consensus 52 ~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~-~~v~v~~sgs~a~~~~l~al- 129 (356)
.++..++|+.|++++.+.+.+.+ +++.+..+.......++.+++++.+++++|+++ ++++|++|++.++..++.++
T Consensus 5 ~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~ 82 (371)
T PF00266_consen 5 NAGTGPMPKSVLEAISDYLRNFY--ANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLL 82 (371)
T ss_dssp TSSS-B-BHHHHHHHHHHHHHSG--SSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCccCCCHHHHHHHHHHHHHhh--hcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccc
Confidence 46777899999999999987644 333221122223345666789999999999988 77878889998888888888
Q ss_pred --cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCC
Q 018401 130 --LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YAR 205 (356)
Q Consensus 130 --~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~ 205 (356)
+++||+|++.+.+|.+...++.... +..|.+++.++. + .++.+|++++++++++ ++++|+++ .++ +|.
T Consensus 83 ~~~~~g~~vl~~~~~~~s~~~~~~~~~----~~~g~~v~~i~~--~-~~~~~~~~~~~~~l~~-~~~lv~~~~~~~~tG~ 154 (371)
T PF00266_consen 83 NPLKPGDEVLVTSNEHPSNRYPWEEIA----KRKGAEVRVIPA--D-PGGSLDLEDLEEALNP-DTRLVSISHVENSTGV 154 (371)
T ss_dssp HHGTTTCEEEEEESSHHHHHHHHHHHH----HHTTEEEEEEEE--G-TTSSCSHHHHHHHHHT-TESEEEEESBETTTTB
T ss_pred ccccccccccccccccccccccccccc----ccchhhhccccc--c-ccchhhhhhhhhhhcc-ccceEEeecccccccE
Confidence 7999999999999998876665322 244666766743 3 3468899999999986 99999998 444 899
Q ss_pred cccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcc----hhccCCcc
Q 018401 206 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK----EINKQGKE 280 (356)
Q Consensus 206 ~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~----~~~~~g~~ 280 (356)
..|+++|.++||++|+++++|++|++|.+++++..++ +|++++|+|| |+||+| |+++++++.. +...++..
T Consensus 155 ~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~---~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~~~p~~~~~~~ 230 (371)
T PF00266_consen 155 RNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELG---ADFLVFSSHK-LGGPPGLGFLYVRPEAIERLRPAKPGGGY 230 (371)
T ss_dssp BSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTT---ESEEEEESTS-TTSSSTEEEEEEEHHHHHHHHTSSSSSST
T ss_pred EeeeceehhhhhccCCceeEechhccccccccccccc---cceeeecccc-cCCCCchhhheehhhhhhccccccccccc
Confidence 9999999999999999999999999999999998887 9999999999 999999 9999999652 22333331
Q ss_pred h-hhhHHHhhccccCCCC--CCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHH---Hhhhccccccc
Q 018401 281 V-FYDYEEKINQAVFPGL--QGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAF---VSNQNNSENIE 347 (356)
Q Consensus 281 ~-~~~~~~~~~~~~~~~~--~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 347 (356)
. +... ........+.+ .||++++.++++..|++++.+ .++++++++...+...+ +.+....+.++
T Consensus 231 ~~~~~~-~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~-~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~ 301 (371)
T PF00266_consen 231 LDFPSL-QEYGLADDARRFEGGTPNVPAIYALNEALKLLEE-IGIERIRERIRELAEYLREALEELPGIEVLG 301 (371)
T ss_dssp TTHHHH-HHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTTEEESS
T ss_pred cccccc-hhcccccccccccccceeeehhhhHHHHHhhhhc-cccccchhhhhhHHHHHHhhhhcCCceeEee
Confidence 1 1112 22111122232 489999999999999999954 57777666555443333 44445555544
No 14
>PLN02651 cysteine desulfurase
Probab=99.96 E-value=3.8e-29 Score=237.57 Aligned_cols=267 Identities=14% Similarity=0.189 Sum_probs=194.0
Q ss_pred ecCCCCCcHHHHHHHHhhhhccCCCCCCCC-ccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-
Q 018401 52 IPSENFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL- 129 (356)
Q Consensus 52 ~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al- 129 (356)
.++..++|+.|++++.+++...+ ++++. .+..+ ....++.+++++.+++++|+++++++|++|+|+++..++.++
T Consensus 5 ~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~ 81 (364)
T PLN02651 5 MQATTPIDPRVLDAMLPFLIEHF--GNPHSRTHLYG-WESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVM 81 (364)
T ss_pred CcCCCCCCHHHHHHHHHHHHhCC--CCCChhhhHHH-HHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHH
Confidence 35666889999999999886534 34432 11001 123455567899999999998888888989998766565543
Q ss_pred ---cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 130 ---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 130 ---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
.++||+|+++..+|+++..++.. ....|.+++.+ +.+ +++.+|++++++++++ ++++++++ ++| +|
T Consensus 82 ~~~~~~g~~vl~~~~~h~s~~~~~~~-----~~~~g~~v~~v--~~~-~~~~~d~~~l~~~i~~-~t~lv~v~~~~n~tG 152 (364)
T PLN02651 82 HFYKDKKKHVITTQTEHKCVLDSCRH-----LQQEGFEVTYL--PVK-SDGLVDLDELAAAIRP-DTALVSVMAVNNEIG 152 (364)
T ss_pred HhccCCCCEEEEcccccHHHHHHHHH-----HHhcCCEEEEE--ccC-CCCcCCHHHHHHhcCC-CcEEEEEECCCCCce
Confidence 57899999999999887655432 12345556556 444 4578899999999987 89999887 666 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcc----hhccCCc
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK----EINKQGK 279 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~----~~~~~g~ 279 (356)
.+.|+++|.++|+++|+++++|++|++|.+++++..++ +|++++|+||| +||.| |+++++++.. +...+|+
T Consensus 153 ~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~---~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~l~p~~~g~~ 228 (364)
T PLN02651 153 VIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLG---VDLMSISGHKI-YGPKGVGALYVRRRPRVRLEPLMSGGG 228 (364)
T ss_pred ecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCC---CCEEEechhhh-CCCCceEEEEEcCCCCCCCCccccCCC
Confidence 99999999999999999999999999999999988777 99999999996 79999 9999998632 1122222
Q ss_pred chhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHH---Hhh-hcccccccc
Q 018401 280 EVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAF---VSN-QNNSENIEE 348 (356)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~ 348 (356)
. + .....||+|+++++++.+|++++.+. .++++++...+...+ ++. ...+++++.
T Consensus 229 ~---~---------~~~~~GT~~~~~~~~l~~al~~~~~~--~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~ 287 (364)
T PLN02651 229 Q---E---------RGRRSGTENTPLVVGLGAACELAMKE--MDYDEKHMKALRERLLNGLRAKLGGVRVNGP 287 (364)
T ss_pred c---c---------CCccCCCccHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHhhCCCEEEECC
Confidence 1 0 11235999999999999999999863 244444433333222 222 235566663
No 15
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.96 E-value=4.3e-29 Score=230.70 Aligned_cols=247 Identities=18% Similarity=0.229 Sum_probs=197.2
Q ss_pred cCCeee-cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHH
Q 018401 47 KGLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 47 ~~i~L~-~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~ 125 (356)
+.+.|+ ....|+++.|.+++..++.+.+ ++|+++.| +....+.+ +++|+.+|+++|+++.+|+||+++|+++.++
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~~~~~~~--~nPh~~~y-~w~~~~~~-E~aR~~VAklInAd~~dIiFts~ATEs~Nlv 118 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLPYLLEYL--GNPHSRSY-GWKAEDAV-EAAREQVAKLINADPSDIVFTSGATESNNLV 118 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHHHHHHhh--cCCCcccc-chhhhHHH-HHHHHHHHHHhCCCCCcEEEeCCchHHHHHH
Confidence 345554 4556889999999999998755 78887633 22222223 5799999999999998888899999888888
Q ss_pred HHhh-cCCCC----eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 018401 126 YTAL-LKPHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 126 l~al-~~~gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~- 199 (356)
++.+ +.++| +|++...+|+++..++...... |..++.+ ++. +++.+|++.+++.+++ +|++|.+.
T Consensus 119 l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~-----g~~Vt~l--pv~-~~~~~d~~~~~~~i~~-~T~lv~I~~ 189 (428)
T KOG1549|consen 119 LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEE-----GLEVTYL--PVE-DSGLVDISKLREAIRS-KTRLVSIMH 189 (428)
T ss_pred HHHhhccccccccceEEEecccCcchhHHHHHHHhc-----CeEEEEe--ccC-ccccccHHHHHHhcCC-CceEEEEEe
Confidence 8887 66788 9999999999998777654443 4445445 555 5688999999999998 99999997
Q ss_pred CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCc---c--
Q 018401 200 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV---K-- 272 (356)
Q Consensus 200 ~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~---~-- 272 (356)
.+| .|.+.|+++|.++|++.|+.+++|+||+.|.+++|+...+ +|++++++||| .||+| |++|+++.. +
T Consensus 190 Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln---~D~~s~s~HK~-ygp~~iGaLYvr~~~~~~~~~ 265 (428)
T KOG1549|consen 190 VNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQELN---ADFLSISAHKI-YGPPGIGALYVRRKRPRLRVE 265 (428)
T ss_pred cccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHcC---chheeeecccc-cCCCcceEEEEccCCCccccc
Confidence 555 7999999999999999999999999999999999999998 99999999995 58888 999999732 1
Q ss_pred hhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhccccc
Q 018401 273 EINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITF 322 (356)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~ 322 (356)
+.+.+|++. ...+.||.+++...++..|.++...+...
T Consensus 266 p~~~GGgq~------------r~~rsGT~~~~~~~~~gsA~e~~~~~~~~ 303 (428)
T KOG1549|consen 266 PPLSGGGQE------------RGLRSGTVATPLAVGLGSAAEFVNKEMAY 303 (428)
T ss_pred CcccCCccc------------cccccCCcCchhhhhhHHHHHHHHhhcch
Confidence 224455542 12345899999999999999999876433
No 16
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.96 E-value=4.8e-28 Score=232.95 Aligned_cols=264 Identities=17% Similarity=0.229 Sum_probs=191.0
Q ss_pred CCeee-cCCCCCcHHHHHHHHhhhhccCCCCCCCC-ccCCCchhHHHHHHHHHHHHHHHcCC-CCCccccCCCchHHHHH
Q 018401 48 GLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 48 ~i~L~-~~~~~~~~~V~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~v~v~~sgs~a~~~ 124 (356)
.+-|+ ++..++|+.|.+++.+++.+.+ +++.+ .+..+ ....+..+.+|+.+++++|+ ++++|++++|+++++..
T Consensus 20 ~~yld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~ 96 (401)
T PRK10874 20 GVYLDSAATALKPQAVIEATQQFYSLSA--GNVHRSQFAAA-QRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINL 96 (401)
T ss_pred eEEEeCCcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHH-HHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHH
Confidence 45565 5666789999999999887633 33322 11111 22344456788999999999 77888889999998887
Q ss_pred HHHhh----cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 018401 125 VYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 125 ~l~al----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~- 199 (356)
++.++ +++||+|++++++|.+.+.++.. .++..|++++.++ .+ .++.+|++++++++++ +|++|+++
T Consensus 97 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~----~~~~~g~~v~~v~--~~-~~~~~d~~~l~~~i~~-~t~lv~i~~ 168 (401)
T PRK10874 97 VAQSYARPRLQPGDEIIVSEAEHHANLVPWLM----VAQQTGAKVVKLP--LG-ADRLPDVDLLPELITP-RTRILALGQ 168 (401)
T ss_pred HHHHhhhccCCCcCEEEECCcchHHHHHHHHH----HHHHhCCEEEEEe--cC-CCCcCCHHHHHHhcCc-CcEEEEEeC
Confidence 88876 47999999999999886554432 1234566676664 44 4468899999999987 89999988
Q ss_pred CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh---
Q 018401 200 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI--- 274 (356)
Q Consensus 200 ~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~--- 274 (356)
++| +|.+.|+++|+++|+++|+++++|++|+.|..+.++...+ +|++++|+|| ++||.| |+++++++....
T Consensus 169 ~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~---~d~~~~s~~K-~~gp~G~G~l~~~~~~~~~~~~ 244 (401)
T PRK10874 169 MSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALD---IDFYAFSGHK-LYGPTGIGVLYGKSELLEAMSP 244 (401)
T ss_pred CcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcC---CCEEEEeccc-ccCCCccEEEEEchHHHhcCCC
Confidence 777 8999999999999999999999999999998887776555 9999999999 568999 999998864221
Q ss_pred ccCCcchh--hhHHHhhccccCCCC--CCCCcHHHHHHHHHHHHHHhcccccchhhcc
Q 018401 275 NKQGKEVF--YDYEEKINQAVFPGL--QGGPHNHTITGLAVALKQVCTLITFSHIHVF 328 (356)
Q Consensus 275 ~~~g~~~~--~~~~~~~~~~~~~~~--~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~ 328 (356)
..+|+... ..+ ..+.....+.+ .||+|++.++|+.+|++++.+. ++.+++++
T Consensus 245 ~~~~~~~~~~~~~-~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~-g~~~~~~~ 300 (401)
T PRK10874 245 WQGGGKMLTEVSF-DGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADI-DINQAESW 300 (401)
T ss_pred eecCCcceEeecc-CccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHh-CHHHHHHH
Confidence 22332211 000 01111112233 3999999999999999998653 44444443
No 17
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=8.1e-28 Score=231.71 Aligned_cols=266 Identities=17% Similarity=0.158 Sum_probs=191.4
Q ss_pred CCeee-cCCCCCcHHHHHHHHhhhhccCCCCCCCC-ccCCCchhHHHHHHHHHHHHHHHcCC-CCCccccCCCchHHHHH
Q 018401 48 GLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 48 ~i~L~-~~~~~~~~~V~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~v~v~~sgs~a~~~ 124 (356)
.+-|+ ++..++|+.|++++.+++...+ +++.. .+..+ ....+..+.+|+.+++++|+ +++++++++|+++++..
T Consensus 24 ~iYld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~ 100 (406)
T PRK09295 24 LAYLDSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLS-AQATEKMENVRKQAALFINARSAEELVFVRGTTEGINL 100 (406)
T ss_pred eEEEeCcccccCCHHHHHHHHHHHHhcC--CCCCCcccHHH-HHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 35554 6666889999999999887533 22211 11111 12334445788999999998 67788889899988887
Q ss_pred HHHh----hcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 018401 125 VYTA----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 125 ~l~a----l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~- 199 (356)
++.+ .+++||+|++++++|++...++... ....|++++.++ .+ .++.+|+++|++++++ ++++|+++
T Consensus 101 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~----~~~~g~~v~~v~--~~-~~~~~d~~~l~~~i~~-~t~lv~l~~ 172 (406)
T PRK09295 101 VANSWGNSNVRAGDNIIISEMEHHANIVPWQML----CARVGAELRVIP--LN-PDGTLQLETLPALFDE-RTRLLAITH 172 (406)
T ss_pred HHHHhhhhcCCCcCEEEECcchhhHHHHHHHHH----HHHcCcEEEEEe--cC-CCCCCCHHHHHHhcCC-CcEEEEEec
Confidence 7765 4689999999999998876655432 223466666664 44 4567899999999987 89999998
Q ss_pred CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh---
Q 018401 200 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI--- 274 (356)
Q Consensus 200 ~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~--- 274 (356)
++| +|.+.|+++|.++|+++|+++++|++|+.|..++++...+ +|++++|+|| ++||.| |++++++++...
T Consensus 173 ~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~---~D~~~~s~~K-~~gp~G~G~l~~~~~~~~~~~~ 248 (406)
T PRK09295 173 VSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALD---CDFYVFSGHK-LYGPTGIGILYVKEALLQEMPP 248 (406)
T ss_pred chhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcC---CCEEEeehhh-ccCCCCcEEEEEchHhHhhCCC
Confidence 777 8999999999999999999999999999999888876666 9999999999 678999 999998865211
Q ss_pred ccCCcch-h-hhHHHhhccccCCCC--CCCCcHHHHHHHHHHHHHHhcccccchhhccc
Q 018401 275 NKQGKEV-F-YDYEEKINQAVFPGL--QGGPHNHTITGLAVALKQVCTLITFSHIHVFS 329 (356)
Q Consensus 275 ~~~g~~~-~-~~~~~~~~~~~~~~~--~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~ 329 (356)
..+|+.. . .+..........+.+ .||+++.+++++.+|++++.+ .+++.++++.
T Consensus 249 ~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~-~g~~~i~~~~ 306 (406)
T PRK09295 249 WEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSA-LGLNNIAEYE 306 (406)
T ss_pred cccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHH-hCHHHHHHHH
Confidence 2333321 0 011000111111222 499999999999999999976 3555555443
No 18
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.96 E-value=1.1e-27 Score=230.34 Aligned_cols=266 Identities=17% Similarity=0.188 Sum_probs=189.3
Q ss_pred CCeee-cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchHHHHHH
Q 018401 48 GLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 48 ~i~L~-~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~a~~~~ 125 (356)
.+-|+ ++..++|+.|++++.+++...+ +++....+.......+..+.+|+.+++++|++ ++++++++|+|+++..+
T Consensus 17 ~iyld~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~ 94 (398)
T TIGR03392 17 TVYLDSAATALKPQAVIDATQQFYRLSS--GTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLV 94 (398)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHH
Confidence 45554 5566889999999999886533 33322111111223344567889999999994 77888899999988878
Q ss_pred HHhh----cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 126 YTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 126 l~al----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
+.++ +++||+|++++++|.+...++.. .+...|++++.++ .+ .++.+|++++++++++ ++++|+++ +
T Consensus 95 ~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~----~~~~~g~~v~~v~--~~-~~~~~~~~~l~~~i~~-~t~lv~i~~~ 166 (398)
T TIGR03392 95 AQSYARPRLQPGDEIIVSEAEHHANLIPWLM----VAQQTGAKVVKLP--IG-ADLLPDIRQLPELLTP-RTRILALGQM 166 (398)
T ss_pred HHHhhhccCCCCCEEEECCcchhHHHHHHHH----HHHHcCcEEEEEe--cC-CCCCcCHHHHHHHhcc-CceEEEEECc
Confidence 8877 58999999999999876544432 1234566666664 44 3467899999999987 89999888 7
Q ss_pred CC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh---c
Q 018401 201 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI---N 275 (356)
Q Consensus 201 ~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~---~ 275 (356)
+| +|.+.|+++|.++|+++|+++++|++|+.|..+.++...+ +|++++|+|| +.||.| |+++++++.... .
T Consensus 167 ~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~---~d~~~~s~~K-~~gp~G~G~l~~~~~~~~~~~~~ 242 (398)
T TIGR03392 167 SNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALD---IDFYAFSGHK-LYGPTGIGVLYGKTELLEAMPPW 242 (398)
T ss_pred cccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcC---CCEEEEeccc-ccCCCceEEEEEcHHHHhhCCCe
Confidence 77 8999999999999999999999999999988887766555 9999999999 668989 999988764211 2
Q ss_pred cCCcchh--hhHHHhhccccCCCC--CCCCcHHHHHHHHHHHHHHhcccccchhhccc
Q 018401 276 KQGKEVF--YDYEEKINQAVFPGL--QGGPHNHTITGLAVALKQVCTLITFSHIHVFS 329 (356)
Q Consensus 276 ~~g~~~~--~~~~~~~~~~~~~~~--~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~ 329 (356)
.+|+... .+. ........+.+ .||++++.++++.+|++++.+ .++++++++.
T Consensus 243 ~~~~~~~~~~~~-~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~-~g~~~i~~~~ 298 (398)
T TIGR03392 243 QGGGKMLSHVSF-DGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTD-IDIAAAEAWS 298 (398)
T ss_pred ecCCceEeeccc-cccccCCChhhccCCCCCHHHHHHHHHHHHHHHH-hCHHHHHHHH
Confidence 2332211 000 00111112223 399999999999999999865 3555544443
No 19
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.95 E-value=5.6e-27 Score=223.54 Aligned_cols=257 Identities=18% Similarity=0.248 Sum_probs=183.1
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCC-CccccCCCchHHHHHHHHhhcCCCCe
Q 018401 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP-EKWGGSLSGSPSNFQVYTALLKPHDR 135 (356)
Q Consensus 57 ~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~-~~v~v~~sgs~a~~~~l~al~~~gd~ 135 (356)
++|+.|++++.+.+.... +.++...|..........+++++.+++++|++. +++++++|+++++..++.+++++||+
T Consensus 11 ~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~ 88 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYG--GSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDH 88 (376)
T ss_pred CCCHHHHHHHHHHHHhcC--CCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCE
Confidence 568899999998877521 112111111111123445578899999999964 47777889998888888888999999
Q ss_pred eeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHH
Q 018401 136 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIR 213 (356)
Q Consensus 136 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~ 213 (356)
|+++.++|+++..++... ....|.+++.+ +.+ +++.+|++++++++.+ ++++|+++ ++| +|.+.|+++|.
T Consensus 89 vl~~~~~~~~~~~~~~~~----~~~~g~~~~~v--~~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~~~i~ 160 (376)
T TIGR01977 89 VITTPMEHNSVARPLECL----KEQIGVEITIV--KCD-NEGLISPERIKRAIKT-NTKLIVVSHASNVTGTILPIEEIG 160 (376)
T ss_pred EEECcchhhHHHHHHHHH----HHHcCcEEEEE--ecC-CCCCcCHHHHHHhcCC-CCeEEEEECCCCCccccCCHHHHH
Confidence 999998888775443321 12235556555 444 4567899999999976 89999887 666 89999999999
Q ss_pred HHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcc--hhccCCcchhhhHHHhhc
Q 018401 214 KVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINKQGKEVFYDYEEKIN 290 (356)
Q Consensus 214 ~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~--~~~~~g~~~~~~~~~~~~ 290 (356)
++|+++|+++|+|++|++|..+.++...+ +|++++|+|||++||.| |+++++++.. +...++........+.
T Consensus 161 ~l~~~~~~~livD~a~~~g~~~~~~~~~~---~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~-- 235 (376)
T TIGR01977 161 ELAQENGIFFILDAAQTAGVIPIDMTELA---IDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSALIDQ-- 235 (376)
T ss_pred HHHHHcCCEEEEEhhhccCccCCCchhcC---CCEEEecccccccCCCCceEEEEcCCcCcCceecCCCccccccccc--
Confidence 99999999999999999999988876666 99999999999999999 9888887642 2222222110000110
Q ss_pred cccCCC--CCCCCcHHHHHHHHHHHHHHhcccccchhhccc
Q 018401 291 QAVFPG--LQGGPHNHTITGLAVALKQVCTLITFSHIHVFS 329 (356)
Q Consensus 291 ~~~~~~--~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~ 329 (356)
....+. ..||++++.++++.++++++.+. +++.++++.
T Consensus 236 ~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~-g~~~~~~~~ 275 (376)
T TIGR01977 236 PSELPDRFESGTLNTPGIAGLNAGIKFIEKI-GIANIAKKE 275 (376)
T ss_pred cccchhhccCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHH
Confidence 011111 24899999999999999999864 555554433
No 20
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.95 E-value=5.5e-27 Score=227.11 Aligned_cols=285 Identities=16% Similarity=0.147 Sum_probs=196.8
Q ss_pred CCeee-cCCCCCcHHHHHHHHhhhhccCCCCCCCC-ccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchHHHHH
Q 018401 48 GLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 48 ~i~L~-~~~~~~~~~V~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~a~~~ 124 (356)
.+-|+ ++..++|+.|++++.+++...+ +++.. .++.+.. ..+..+.+|+.+++++|++ +++|++++|+|+++..
T Consensus 33 ~iyLd~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~ 109 (424)
T PLN02855 33 LVYLDNAATSQKPAAVLDALQDYYEEYN--SNVHRGIHALSAK-ATDAYELARKKVAAFINASTSREIVFTRNATEAINL 109 (424)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCccchHHHH-HHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHH
Confidence 35554 4555789999999999886532 22222 1111111 2233457889999999995 5788889999988887
Q ss_pred HHHh----hcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 018401 125 VYTA----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 125 ~l~a----l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~- 199 (356)
++.+ .+++||+|++++++|++...++... ....|.+++.++ .+ .++.+|++++++.+++ ++++|+++
T Consensus 110 i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~----a~~~g~~v~~v~--~~-~~~~~~~~~l~~~i~~-~t~lv~i~~ 181 (424)
T PLN02855 110 VAYTWGLANLKPGDEVILSVAEHHSNIVPWQLV----AQKTGAVLKFVG--LT-PDEVLDVEQLKELLSE-KTKLVATHH 181 (424)
T ss_pred HHHHhhhhcCCCcCEEEECCCccHHHHHHHHHH----HHHcCCEEEEEe--cC-CCCCcCHHHHHHHhcc-CceEEEEeC
Confidence 7765 3689999999999998776544321 223466665564 44 3356899999999987 89999998
Q ss_pred CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh---
Q 018401 200 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI--- 274 (356)
Q Consensus 200 ~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~--- 274 (356)
++| +|.+.|+++|.++|+++|+++++|++|+.|..++++...+ +|++++|+|| ++||.| |+++++++....
T Consensus 182 ~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~---~d~~~~s~~K-~~gp~G~G~l~~~~~~~~~~~p 257 (424)
T PLN02855 182 VSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLG---ADFLVASSHK-MCGPTGIGFLWGKSDLLESMPP 257 (424)
T ss_pred ccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcC---CCEEEeeccc-ccCCCccEEEEEchhhhhcCCC
Confidence 677 8999999999999999999999999999998888776666 8999999999 678999 999998864211
Q ss_pred ccCCcch-hhhHHHhhccccCCC--CCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHH---Hhhhcccccccc
Q 018401 275 NKQGKEV-FYDYEEKINQAVFPG--LQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAF---VSNQNNSENIEE 348 (356)
Q Consensus 275 ~~~g~~~-~~~~~~~~~~~~~~~--~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 348 (356)
..+|+.. ...+.........+. ..||+++..++++.+|++++.+ .++++++++...+...+ ++....++.+++
T Consensus 258 ~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~-~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~ 336 (424)
T PLN02855 258 FLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSE-IGMDRIHEYEVELGTYLYEKLSSVPGVRIYGP 336 (424)
T ss_pred EecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence 2233221 100000000000122 2499999999999999999976 46777666544443333 222334555543
No 21
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.95 E-value=3.1e-27 Score=227.33 Aligned_cols=239 Identities=17% Similarity=0.215 Sum_probs=178.8
Q ss_pred cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh---
Q 018401 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL--- 129 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al--- 129 (356)
++..++|+.|++++.+++...+ +++....+.......+..+.+++.+++++|+++++++|++|+|+++..++.++
T Consensus 10 aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~ 87 (402)
T TIGR02006 10 AATTPVDPRVAEKMMPYLTEKF--GNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHF 87 (402)
T ss_pred CcCCCCCHHHHHHHHHHHHhcC--CCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence 5556889999999998886533 33332111001112345567889999999998888888999998888776665
Q ss_pred -cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCc
Q 018401 130 -LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARL 206 (356)
Q Consensus 130 -~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~ 206 (356)
.++||+|+++..+|.++..++... ...|.+++.+ +.+ +++.+|++++++++.+ ++++|+++ ++| +|..
T Consensus 88 ~~~~g~~Vi~~~~~h~s~~~~~~~~-----~~~g~~v~~v--~~~-~~~~~d~~~l~~~l~~-~~~lv~v~~~~n~tG~~ 158 (402)
T TIGR02006 88 YKSKGNHIITSKTEHKAVLDTCRYL-----EREGFEVTYL--PPK-SNGLIDLEELKAAIRD-DTILVSIMHVNNEIGVI 158 (402)
T ss_pred hcCCCCEEEECCCccHHHHHHHHHH-----HhcCCEEEEE--ccC-CCCcCCHHHHHHhcCC-CCEEEEEECCCcCceec
Confidence 368999999999998877655321 2235556556 444 4577999999999986 78998887 666 8999
Q ss_pred ccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcc----hhccCCcch
Q 018401 207 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK----EINKQGKEV 281 (356)
Q Consensus 207 ~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~----~~~~~g~~~ 281 (356)
.|+++|.++|+++|+++++|++|++|..++++...+ +|++++|+||+ .||.| |+++++++.. +...+|+.
T Consensus 159 ~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~---~D~~~~s~~K~-~gp~G~G~l~~~~~~~~~~~~~~~g~~~- 233 (402)
T TIGR02006 159 QDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELK---VDLMSISGHKI-YGPKGIGALYVRRKPRVRLEALIHGGGH- 233 (402)
T ss_pred ccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccC---CCEEEEehhhh-cCCCceEEEEEccCCCCCCCceecCCCc-
Confidence 999999999999999999999999999988877666 99999999995 68988 9999987421 11111111
Q ss_pred hhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 282 FYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 282 ~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
. .....||+++..++++..|++++.+
T Consensus 234 --~---------~~~~~gt~~~~~~~al~~al~~~~~ 259 (402)
T TIGR02006 234 --E---------RGMRSGTLPTHQIVGMGEAFRIAKE 259 (402)
T ss_pred --c---------CCccCCCccHHHHHHHHHHHHHHHH
Confidence 0 0112489999999999999999875
No 22
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.95 E-value=5.8e-27 Score=221.67 Aligned_cols=239 Identities=19% Similarity=0.201 Sum_probs=178.7
Q ss_pred cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc--
Q 018401 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL-- 130 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~-- 130 (356)
++..++|+.|++++.+++...+ ++++.+.+.......++.+++++.+++++|++++++++++|+++++..++.++.
T Consensus 5 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~ 82 (353)
T TIGR03235 5 NATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARA 82 (353)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence 4566889999999999886533 344432111011123445678999999999998888889899988887777775
Q ss_pred --CCC-CeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCC
Q 018401 131 --KPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YAR 205 (356)
Q Consensus 131 --~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~ 205 (356)
.+| +.|++...+|+++..++.. ....|.+++.+ +.+ +++.+|++++++++++ ++++|+++ ++| +|.
T Consensus 83 ~~~~g~~~vi~~~~~~~s~~~~~~~-----~~~~G~~v~~v--~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~tG~ 153 (353)
T TIGR03235 83 GEQKGKKHIITSAIEHPAVLEPIRA-----LERNGFTVTYL--PVD-ESGRIDVDELADAIRP-DTLLVSIMHVNNETGS 153 (353)
T ss_pred cccCCCCeeeEcccccHHHHHHHHH-----HHhcCCEEEEE--ccC-CCCcCCHHHHHHhCCC-CCEEEEEEcccCCcee
Confidence 356 7899999999887665542 22346556555 444 4567999999999976 78999887 666 899
Q ss_pred cccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcch------hccCC
Q 018401 206 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE------INKQG 278 (356)
Q Consensus 206 ~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~------~~~~g 278 (356)
+.|+++|.++|+++|+++++|++|+.|..+.++..++ +|++++|+||| +||+| |+++++++... ...++
T Consensus 154 ~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~---~D~~~~s~~K~-~gp~g~g~l~~~~~~~~~~~~~~~~~~~ 229 (353)
T TIGR03235 154 IQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADR---IDLISCSGHKI-YGPKGIGALVIRKRGKPKAPLKPIMFGG 229 (353)
T ss_pred ccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccC---CCEEEeehhhc-CCCCceEEEEEccCcccccccCceeeCC
Confidence 9999999999999999999999999999998887766 99999999997 58998 99999885210 01111
Q ss_pred cchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 279 KEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
+. ......||++++.++++.+|++++.+
T Consensus 230 ~~------------~~~~~~gt~~~~~~~al~~al~~~~~ 257 (353)
T TIGR03235 230 GQ------------ERGLRPGTLPVHLIVGMGEAAEIARR 257 (353)
T ss_pred CC------------cCccccCCCChHHHHHHHHHHHHHHh
Confidence 00 00112489999999999999998864
No 23
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.95 E-value=4.4e-27 Score=224.58 Aligned_cols=240 Identities=17% Similarity=0.253 Sum_probs=182.8
Q ss_pred ecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-
Q 018401 52 IPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL- 130 (356)
Q Consensus 52 ~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~- 130 (356)
.++..++|++|++++.+++.+.+ ++++..+.. ........+++|+++++++|++++++++++|+++++..++.+++
T Consensus 5 ~aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~ 81 (379)
T TIGR03402 5 NNATTRVDPEVLEAMLPYFTEYF--GNPSSMHSF-GGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALA 81 (379)
T ss_pred CcCCCCCCHHHHHHHHHHHHhcC--CCCCcccHH-HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence 35667889999999999887533 555431111 11234455688899999999998888889999998887777653
Q ss_pred --CCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCc
Q 018401 131 --KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARL 206 (356)
Q Consensus 131 --~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~ 206 (356)
.+||+|++...+|+++..++... ...|.+++.+ +.+ +++.+|++++++++++ ++++++++ ++| +|.+
T Consensus 82 ~~~~~~~vv~~~~~~~s~~~~~~~~-----~~~G~~v~~v--~~~-~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~tG~~ 152 (379)
T TIGR03402 82 AQPEKRHIITTAVEHPAVLSLCQHL-----EKQGYKVTYL--PVD-EEGRLDLEELRAAITD-DTALVSVMWANNETGTI 152 (379)
T ss_pred hcCCCCeEEEcccccHHHHHHHHHH-----HHcCCEEEEE--ccC-CCCcCCHHHHHHhcCC-CcEEEEEEcccCCeeec
Confidence 46789999999998776555422 2246556556 444 4567999999999987 89999887 666 8999
Q ss_pred ccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcc--hhccCCcchhh
Q 018401 207 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINKQGKEVFY 283 (356)
Q Consensus 207 ~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~--~~~~~g~~~~~ 283 (356)
.|+++|.++|+++|+++++|++|++|..++++...+ +|++++|+|| ++||.| |+++++++.. +...+|+.
T Consensus 153 ~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~---~D~~~~s~~K-~~gp~G~g~l~v~~~~~~~p~~~g~~~--- 225 (379)
T TIGR03402 153 FPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMN---IDMLSLSGHK-LHGPKGVGALYIRKGTRFRPLLRGGHQ--- 225 (379)
T ss_pred ccHHHHHHHHHHcCCEEEEECcccccccccCcccCC---CCEEEEcHHH-cCCCCceEEEEECCCCCCCCcccCCcc---
Confidence 999999999999999999999999999998887776 9999999999 789999 9999987532 11222211
Q ss_pred hHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 284 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 284 ~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
. .....||++++++.++.+|++++.+.
T Consensus 226 ~---------~~~~~gt~~~~~~~~l~~al~~~~~~ 252 (379)
T TIGR03402 226 E---------RGRRAGTENVPGIVGLGKAAELATEH 252 (379)
T ss_pred C---------CCcCCCCccHHHHHHHHHHHHHHHHh
Confidence 0 11235899999999999999998763
No 24
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.95 E-value=1.8e-26 Score=221.69 Aligned_cols=256 Identities=15% Similarity=0.158 Sum_probs=185.8
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC-ccccCCCchHHHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE-KWGGSLSGSPSNFQVY 126 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~-~v~v~~sgs~a~~~~l 126 (356)
.+.+++++..+++.|++++.+.+.. + . .....++.+++++.+++++|++.+ .++++++|++++..++
T Consensus 10 ~~l~~pGP~~~~~~V~~a~~~~~~~-~----~-------~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~ 77 (401)
T PLN02409 10 NHLFVPGPVNIPERVLRAMNRPNED-H----R-------SPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESAL 77 (401)
T ss_pred ceeccCCCCCCCHHHHHHhcCCCCC-C----C-------CHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHH
Confidence 3566788888999999999765432 1 1 134567778899999999999764 4455889999999888
Q ss_pred HhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh---cCCcEEEEc-CCC
Q 018401 127 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAG-ASA 202 (356)
Q Consensus 127 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~---~~~k~v~l~-~~n 202 (356)
..++++||+|+++++.|.+.. +. ..++..|.+++.++ .+ .+..+|++++++++++ +++++|+++ ++|
T Consensus 78 ~~~~~~Gd~Vlv~~~~~~~~~--~~----~~~~~~g~~v~~v~--~~-~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~ 148 (401)
T PLN02409 78 TNTLSPGDKVVSFRIGQFSLL--WI----DQMQRLNFDVDVVE--SP-WGQGADLDILKSKLRQDTNHKIKAVCVVHNET 148 (401)
T ss_pred HhcCCCCCEEEEeCCCchhHH--HH----HHHHHcCCceEEEE--CC-CCCCCCHHHHHHHHhhCcCCCccEEEEEeecc
Confidence 889999999999997665432 21 12334566676664 33 2245799999999975 368999888 555
Q ss_pred -CCCcccHHHHHHH--HHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhc-cC
Q 018401 203 -YARLYDYERIRKV--CNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-KQ 277 (356)
Q Consensus 203 -~g~~~~l~~I~~l--a~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~-~~ 277 (356)
+|.+.|+++|.++ |+++|+++++|++|++|..++++..++ +|++++|+||||++|.| |+++++++..... ..
T Consensus 149 ~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~---~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~ 225 (401)
T PLN02409 149 STGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWG---VDVALTGSQKALSLPTGLGIVCASPKALEASKTA 225 (401)
T ss_pred cccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccC---ccEEEEcCccccCcCCCcceeEECHHHHHHHhcC
Confidence 8999999999999 999999999999999999998887777 99999999999999999 9999988642211 10
Q ss_pred C-cchhhhHHHhhccccCCCC-CCCCcHHHHHHHHHHHHHHhcccccchhhcc
Q 018401 278 G-KEVFYDYEEKINQAVFPGL-QGGPHNHTITGLAVALKQVCTLITFSHIHVF 328 (356)
Q Consensus 278 g-~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~ 328 (356)
. ....+++....+....... .+||+++.+.++.+|++++.+ .++++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~-~G~e~i~~~ 277 (401)
T PLN02409 226 KSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFE-EGLENVIAR 277 (401)
T ss_pred CCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHH-hhHHHHHHH
Confidence 0 0111121111111111111 369999999999999999976 455555544
No 25
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=9.8e-26 Score=209.24 Aligned_cols=247 Identities=17% Similarity=0.119 Sum_probs=190.2
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCcccc-CCCchHHHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGG-SLSGSPSNFQVY 126 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v-~~sgs~a~~~~l 126 (356)
.+.|++++.++++.|+++|.+.....+ ......+.+.+.+.++..|+++...+.+ ++||+.++.+++
T Consensus 6 ~~Ll~PGP~~v~~~V~~am~~~~~~h~------------s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav 73 (383)
T COG0075 6 RLLLTPGPVPVPPRVLLAMARPMVGHR------------SPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAV 73 (383)
T ss_pred ceeeeCCCCCCCHHHHHHhcCCCCCCC------------CHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHH
Confidence 467889999999999999987554311 1223455667889999999998544444 899999999999
Q ss_pred HhhcCCCCeeeecCCCCCcccCccccccc--ccccccceeeEEEecccCCCCCCCCHHHHHHHhhh-cCCcEEEEc--CC
Q 018401 127 TALLKPHDRIMALDLPHGGHLSHGYQTDT--KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAG--AS 201 (356)
Q Consensus 127 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~-~~~k~v~l~--~~ 201 (356)
..+++|||+||+.. .+.+..+ +.++..|..++.+ ... .+..+|++++++++++ ...++|.++ .+
T Consensus 74 ~sl~~pgdkVLv~~--------nG~FG~R~~~ia~~~g~~v~~~--~~~-wg~~v~p~~v~~~L~~~~~~~~V~~vH~ET 142 (383)
T COG0075 74 ASLVEPGDKVLVVV--------NGKFGERFAEIAERYGAEVVVL--EVE-WGEAVDPEEVEEALDKDPDIKAVAVVHNET 142 (383)
T ss_pred HhccCCCCeEEEEe--------CChHHHHHHHHHHHhCCceEEE--eCC-CCCCCCHHHHHHHHhcCCCccEEEEEeccC
Confidence 99999999999987 3333332 3456677777666 333 3458999999999984 246677665 56
Q ss_pred CCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCc-
Q 018401 202 AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGK- 279 (356)
Q Consensus 202 n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~- 279 (356)
+||...|+++|+++|++||+++|||+..++|..++++..|+ +|+++++++|+|++|+| |++.++++.........
T Consensus 143 STGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wg---iDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~ 219 (383)
T COG0075 143 STGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWG---IDVAITGSQKALGAPPGLAFVAVSERALEAIEERKH 219 (383)
T ss_pred cccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcC---ccEEEecCchhccCCCccceeEECHHHHHHHhcCCC
Confidence 68999999999999999999999999999999999999998 99999999999999999 99999886433322111
Q ss_pred chh-hhHHHhhccccC-CCCCCCCcHHHHHHHHHHHHHHhccc
Q 018401 280 EVF-YDYEEKINQAVF-PGLQGGPHNHTITGLAVALKQVCTLI 320 (356)
Q Consensus 280 ~~~-~~~~~~~~~~~~-~~~~gt~~~~~~~al~~Al~~~~~~~ 320 (356)
+.+ +++.++++.... .....||++..+.||..||+.++++.
T Consensus 220 ~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EG 262 (383)
T COG0075 220 PSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEG 262 (383)
T ss_pred CceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 122 255554443322 33458999999999999999999873
No 26
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=5.7e-26 Score=217.15 Aligned_cols=238 Identities=16% Similarity=0.252 Sum_probs=177.6
Q ss_pred cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC-CCCccccCCCchHHHHHHHHhhc-
Q 018401 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGGSLSGSPSNFQVYTALL- 130 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~v~v~~sgs~a~~~~l~al~- 130 (356)
++..++++.|++++.+++.+.+ ++++..+..+......+++ .++.+++.+|+ +++++++++|+++++..++.++.
T Consensus 6 aa~~~~~~~v~~~~~~~~~~~~--~n~~~~~~~~~~~~~~l~~-a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~ 82 (382)
T TIGR03403 6 NATTMLDPKVKELMDPFFCDIY--GNPNSLHQFGTATHPAIAE-ALDKLYKGINARDLDDIIITSCATESNNWVLKGVYF 82 (382)
T ss_pred cCCCCCCHHHHHHHHHHHHhcC--cCCccccHHHHHHHHHHHH-HHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 5566788999999999987644 4444332222334455554 44566667787 67788889999988887777652
Q ss_pred ----CC-CCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-C
Q 018401 131 ----KP-HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-Y 203 (356)
Q Consensus 131 ----~~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~ 203 (356)
++ +|+|+++..+|+++..++. .+...|.+++.+ +.+ +++.+|++++++++.+ ++++++++ ++| +
T Consensus 83 ~~~~~~~~~~vi~~~~e~ps~~~~~~-----~~~~~G~~v~~v--~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~~n~t 153 (382)
T TIGR03403 83 DEILKGGKNHIITTEVEHPAVRATCA-----FLESLGVEVTYL--PIN-EQGTITAEQVREAITE-KTALVSVMWANNET 153 (382)
T ss_pred hhcccCCCCEEEEcCCccHHHHHHHH-----HHHHCCCEEEEE--ecC-CCCCCCHHHHHHhccc-CCeEEEEEcccCCC
Confidence 55 4789999999988766543 222346666666 444 4478899999999987 78998887 777 8
Q ss_pred CCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcc--hhccCCcc
Q 018401 204 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINKQGKE 280 (356)
Q Consensus 204 g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~--~~~~~g~~ 280 (356)
|.+.|+++|.++|+++|+++++|++|+.|..++++..++ +|++++|+||| +||+| |+++++++.. +...+|+.
T Consensus 154 G~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~---~D~~~~s~~K~-~gp~G~g~l~vr~~~~~~p~~~g~~~ 229 (382)
T TIGR03403 154 GMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAG---VDFLSFSAHKF-HGPKGVGGLYIRKGVELTPLFHGGEH 229 (382)
T ss_pred ccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccccC---CCEEEEcchhh-CCCCceEEEEECCCCCCCCcccCCCC
Confidence 999999999999999999999999999998887776666 99999999996 68999 9999988642 21222211
Q ss_pred hhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 281 VFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
......||++.++++++..|++++.+
T Consensus 230 ------------~~~~~~gt~~~~~~~al~~al~~~~~ 255 (382)
T TIGR03403 230 ------------MGGRRSGTLNVPYIVAMGEAMRLANE 255 (382)
T ss_pred ------------CCCcccCCcChHHHHHHHHHHHHHHH
Confidence 01123489999999999999988765
No 27
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=1e-25 Score=216.89 Aligned_cols=266 Identities=20% Similarity=0.184 Sum_probs=185.7
Q ss_pred Ceee-cCCCCCcHHHHHHHHhhhhccCCCCCCCC-ccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchHHHHHH
Q 018401 49 LELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 49 i~L~-~~~~~~~~~V~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~a~~~~ 125 (356)
+-|+ ++..++|+.|.+++.+.+...+ +++.. .++.+ .......+++|+.+++++|++ ++++++++|+++++..+
T Consensus 20 ~yld~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~ 96 (403)
T TIGR01979 20 VYLDSAATSQKPQQVIDAVAEYYRNSN--ANVHRGIHTLS-VRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLV 96 (403)
T ss_pred EEEeCccccCCCHHHHHHHHHHHHhCC--CCCCCCccHHH-HHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHH
Confidence 4454 5555789999999998876643 33322 11111 112234457889999999997 67788888889887767
Q ss_pred HHhh----cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 126 YTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 126 l~al----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
+.++ +++||+|++++++|.+...++.. .+...|.+++.++ .+ +++.+|++++++++.+ ++++|+++ +
T Consensus 97 ~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~----~~~~~g~~~~~v~--~~-~~~~~~~~~l~~~i~~-~~~lv~~~~~ 168 (403)
T TIGR01979 97 AYSWGDSNLKAGDEIVISEMEHHANIVPWQL----LAERTGATLKFIP--LD-DDGTLDLDDLEKLLTE-KTKLVAITHV 168 (403)
T ss_pred HHHhhhhcCCCCCEEEECcchhhHHHHHHHH----HHHhcCcEEEEEe--cC-CCCCCCHHHHHHHhcc-CCeEEEEEcc
Confidence 7664 68999999999999887544332 2234566666664 44 4578999999999987 89999988 6
Q ss_pred CC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh---c
Q 018401 201 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI---N 275 (356)
Q Consensus 201 ~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~---~ 275 (356)
+| +|.+.|+++|.++|+++|+++++|++|+.|..+.++...+ +|++++|+||+ .||.| |+++++++.... .
T Consensus 169 ~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~---~d~~~~s~~K~-~gp~G~g~l~~~~~~~~~~~~~ 244 (403)
T TIGR01979 169 SNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALD---CDFYVFSGHKM-YGPTGIGVLYGKEELLEQMPPF 244 (403)
T ss_pred cccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccC---CCEEEEecccc-cCCCCceEEEEchHHHhcCCCe
Confidence 66 8999999999999999999999999999998887776655 99999999995 47989 999998754211 2
Q ss_pred cCCcchhhhH-HHhhccccCCCC--CCCCcHHHHHHHHHHHHHHhcccccchhhcccc
Q 018401 276 KQGKEVFYDY-EEKINQAVFPGL--QGGPHNHTITGLAVALKQVCTLITFSHIHVFSL 330 (356)
Q Consensus 276 ~~g~~~~~~~-~~~~~~~~~~~~--~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~ 330 (356)
..|+...... .........+.+ .||+++..++++.+|++++.+ .++++++++..
T Consensus 245 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~-~g~~~~~~~~~ 301 (403)
T TIGR01979 245 LGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEA-IGLENIEAHEH 301 (403)
T ss_pred ecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHH-hCHHHHHHHHH
Confidence 2222110000 000000001122 389999999999999999875 34444444433
No 28
>PRK02948 cysteine desulfurase; Provisional
Probab=99.94 E-value=7.9e-26 Score=216.12 Aligned_cols=238 Identities=16% Similarity=0.179 Sum_probs=179.9
Q ss_pred cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc--
Q 018401 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL-- 130 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~-- 130 (356)
++..++|+.|++++.+++...+ ++++..+..+ .....+.+.+++.+++++|++++++++++|+++++..++.+++
T Consensus 7 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~ 83 (381)
T PRK02948 7 AATTPMSKEALQTYQKAASQYF--GNESSLHDIG-GTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNA 83 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCccccHHH-HHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHh
Confidence 5666889999999998887533 3333322222 2234456688999999999988888888888998887777765
Q ss_pred --CCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCc
Q 018401 131 --KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARL 206 (356)
Q Consensus 131 --~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~ 206 (356)
++||.|+++..+|+++..++. .++..|.+++.+ +.+ +++.+|+++|++++.+ ++++|+++ ++| +|.+
T Consensus 84 ~~~~g~~vv~~~~~h~s~~~~~~-----~~~~~g~~v~~v--~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~tG~~ 154 (381)
T PRK02948 84 LPQNKKHIITTPMEHASIHSYFQ-----SLESQGYTVTEI--PVD-KSGLIRLVDLERAITP-DTVLASIQHANSEIGTI 154 (381)
T ss_pred ccCCCCEEEECCcccHHHHHHHH-----HHHhCCCEEEEE--eeC-CCCCCCHHHHHHhcCC-CCEEEEEECCcCCcEee
Confidence 579999999999987765443 223346666666 444 4578999999999876 78999887 666 8999
Q ss_pred ccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcc--hhccCCcchhh
Q 018401 207 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINKQGKEVFY 283 (356)
Q Consensus 207 ~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~--~~~~~g~~~~~ 283 (356)
.|+++|.++|+++|+++++|++|++|..+.++...+ +|++++|+||+ .||.| |+++++++.. ....++.
T Consensus 155 ~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~---~d~~~~s~~K~-~gp~G~G~l~~~~~~~~~~~~~~~~---- 226 (381)
T PRK02948 155 QPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMG---IDSLSVSAHKI-YGPKGVGAVYINPQVRWKPVFPGTT---- 226 (381)
T ss_pred hhHHHHHHHHHHcCCEEEEEChhhccccccCcccCC---CCEEEecHHhc-CCCCcEEEEEEcCCCCCCCcccCCC----
Confidence 999999999999999999999999998888777666 99999999995 57999 9999887531 0000000
Q ss_pred hHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 284 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 284 ~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
.......||++.++++++.+|++++.+
T Consensus 227 --------~~~~~~~~t~~~~~~~a~~~al~~~~~ 253 (381)
T PRK02948 227 --------HEKGFRPGTVNVPGIAAFLTAAENILK 253 (381)
T ss_pred --------CCCCcCCCCccHHHHHHHHHHHHHHHH
Confidence 001123589999999999999998754
No 29
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.94 E-value=1.5e-25 Score=215.37 Aligned_cols=243 Identities=20% Similarity=0.262 Sum_probs=178.6
Q ss_pred Ceee-cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHH
Q 018401 49 LELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYT 127 (356)
Q Consensus 49 i~L~-~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~ 127 (356)
+-|+ ++..++|+.+++++.+.+.... ..++.. |.......++.+++++.+++++|++++++++++|+++++..++.
T Consensus 19 ~yl~~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~ 95 (397)
T TIGR01976 19 VFFDNPAGTQIPQSVADAVSAALTRSN--ANRGGA-YESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSR 95 (397)
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhcC--CCCCCC-chHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHH
Confidence 4454 6666789999999999886522 122111 12122334556788899999999987777778888887665555
Q ss_pred hh---cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 018401 128 AL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 202 (356)
Q Consensus 128 al---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n- 202 (356)
++ ++|||+|++++++|.++..++.. .+...|++++.+ +.+.+++.+|++++++++.+ ++++|+++ ++|
T Consensus 96 ~~~~~~~~gd~vl~~~~~~~s~~~~~~~----~~~~~g~~~~~~--~~~~~~~~~~~~~l~~~i~~-~~~lv~i~~~~n~ 168 (397)
T TIGR01976 96 AISRRWGPGDEVIVTRLDHEANISPWLQ----AAERAGAKVKWA--RVDEATGELHPDDLASLLSP-RTRLVAVTAASNT 168 (397)
T ss_pred HHHhcCCCCCEEEEcCCchHhHHHHHHH----HHHhcCCEEEEE--eccccCCCcCHHHHHHhcCC-CceEEEEeCCCCC
Confidence 54 68999999999999877544421 223456666656 44433578899999999986 89999988 767
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchh
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVF 282 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~ 282 (356)
+|.+.|+++|+++|+++|+++++|++|+.|..+.++...+ +|++++|+|||+ ||+.|++++++++
T Consensus 169 tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~---~d~~~~s~~K~~-g~~~G~l~~~~~~----------- 233 (397)
T TIGR01976 169 LGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATG---ADFLTCSAYKFF-GPHMGILWGRPEL----------- 233 (397)
T ss_pred CCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcC---CCEEEEechhhc-CCceEEEEEcHHH-----------
Confidence 8999999999999999999999999999887776665555 999999999986 6767999988742
Q ss_pred hhHHHhhccc-------cCCCC--CCCCcHHHHHHHHHHHHHHhcc
Q 018401 283 YDYEEKINQA-------VFPGL--QGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 283 ~~~~~~~~~~-------~~~~~--~gt~~~~~~~al~~Al~~~~~~ 319 (356)
.+.+... ..+.+ .||+++..++++.+|++++.+.
T Consensus 234 ---~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~ 276 (397)
T TIGR01976 234 ---LMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGL 276 (397)
T ss_pred ---HhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHh
Confidence 2222110 01122 3899999999999999999754
No 30
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.94 E-value=2.5e-25 Score=210.66 Aligned_cols=246 Identities=17% Similarity=0.097 Sum_probs=176.0
Q ss_pred CeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCc-cccCCCchHHHHHHHH
Q 018401 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEK-WGGSLSGSPSNFQVYT 127 (356)
Q Consensus 49 i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~-v~v~~sgs~a~~~~l~ 127 (356)
++|++++.++|+.|.+++.+.+.. + . + ....++.+++++.+++++|+++++ +++++||++++..++.
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~-~--~------~---~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~ 68 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPMLG-H--R------S---PEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALS 68 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCccC-C--C------C---HHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHH
Confidence 468899999999999999765432 1 1 1 123455667889999999996544 4458888999998999
Q ss_pred hhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCC
Q 018401 128 ALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YAR 205 (356)
Q Consensus 128 al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~ 205 (356)
+++++||+|+++.+.|.+.. + ...+...|.+++.+ +.+ +++.+|++++++.+.++++++|+++ ++| +|.
T Consensus 69 ~~~~~g~~vl~~~~~~~~~~--~----~~~~~~~g~~~~~v--~~~-~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~ 139 (356)
T cd06451 69 NLLEPGDKVLVGVNGVFGDR--W----ADMAERYGADVDVV--EKP-WGEAVSPEEIAEALEQHDIKAVTLTHNETSTGV 139 (356)
T ss_pred HhCCCCCEEEEecCCchhHH--H----HHHHHHhCCCeEEe--ecC-CCCCCCHHHHHHHHhccCCCEEEEeccCCCccc
Confidence 99999999999886665421 1 11234456666666 444 3468899999999975579999887 556 899
Q ss_pred cccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccC--Ccchh
Q 018401 206 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ--GKEVF 282 (356)
Q Consensus 206 ~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~--g~~~~ 282 (356)
+.|+++|.++|+++|+++++|++|++|..+.++...+ +|++++|+||||++|.| |+++.+++....... +...+
T Consensus 140 ~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~---~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~ 216 (356)
T cd06451 140 LNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWG---VDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGF 216 (356)
T ss_pred ccCHHHHHHHHHhcCCEEEEeeehhccCccccccccC---ccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCce
Confidence 9999999999999999999999999988776655444 89999999999999988 999998753211110 11111
Q ss_pred h-hHHHhhccccCC-CCCCCCcHHHHHHHHHHHHHHhc
Q 018401 283 Y-DYEEKINQAVFP-GLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 283 ~-~~~~~~~~~~~~-~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
+ +........... ...+|+++..++++.++++++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~ 254 (356)
T cd06451 217 YFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILE 254 (356)
T ss_pred eecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHH
Confidence 0 111000000001 23478899999999999998875
No 31
>PRK14012 cysteine desulfurase; Provisional
Probab=99.94 E-value=1.1e-25 Score=216.83 Aligned_cols=239 Identities=18% Similarity=0.218 Sum_probs=176.0
Q ss_pred cCCCCCcHHHHHHHHhhhh--ccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-
Q 018401 53 PSENFTSVSVMQAVGSVMT--NKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL- 129 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al- 129 (356)
++..++|+.|++++.+++. +.+ +++............+..+++++.+++++|++++++++++|+|+++..++.++
T Consensus 10 a~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~ 87 (404)
T PRK14012 10 SATTPVDPRVAEKMMPYLTMDGTF--GNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAA 87 (404)
T ss_pred cCCCCCCHHHHHHHHHHHHhcccC--cCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHH
Confidence 5556889999999999886 333 23322111000111244557889999999998888888999998887676665
Q ss_pred ---cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 130 ---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 130 ---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
+++||+|++++.+|+++..++... ...|++++.+ +.+ +++.+|+++|++++++ ++++|+++ .+| +|
T Consensus 88 ~~~~~~gd~Vi~~~~~~~s~~~~~~~~-----~~~g~~~~~v--~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~~n~tG 158 (404)
T PRK14012 88 HFYQKKGKHIITSKTEHKAVLDTCRQL-----EREGFEVTYL--DPQ-SNGIIDLEKLEAAMRD-DTILVSIMHVNNEIG 158 (404)
T ss_pred HhhcCCCCEEEEecCccHHHHHHHHHH-----HhCCCEEEEE--ccC-CCCcCCHHHHHHhcCC-CCEEEEEECcCCCcc
Confidence 478999999999998876654421 2236556555 444 4578899999999987 89999887 666 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh----ccCCc
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI----NKQGK 279 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~----~~~g~ 279 (356)
.+.|+++|.++|+++|+++|+|++|++|..+.++...+ +|++++|+|| +.||.| |+++++++.... ..+|+
T Consensus 159 ~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~---~D~~~~s~~K-~~gp~g~G~l~~~~~~~~~~~~~~~g~~ 234 (404)
T PRK14012 159 VIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLK---VDLMSFSAHK-IYGPKGIGALYVRRKPRVRLEAQMHGGG 234 (404)
T ss_pred chhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCC---CCEEEEehhh-ccCCCceEEEEEecCCCCCCCceecCCC
Confidence 99999999999999999999999999999887776555 9999999999 568888 999988752111 11111
Q ss_pred chhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 280 EVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
. + .....||++...+.++.+|++.+..
T Consensus 235 ~---~---------~~~~~gt~~~~~~~~l~~al~~~~~ 261 (404)
T PRK14012 235 H---E---------RGMRSGTLPTHQIVGMGEAARIAKE 261 (404)
T ss_pred c---c---------CCccCCCcCHHHHHHHHHHHHHHHh
Confidence 0 0 0122478999999999999988764
No 32
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=2.4e-25 Score=212.06 Aligned_cols=261 Identities=17% Similarity=0.163 Sum_probs=184.0
Q ss_pred ecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchHHHHHHHHhhc
Q 018401 52 IPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSPSNFQVYTALL 130 (356)
Q Consensus 52 ~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~a~~~~l~al~ 130 (356)
..+.+++|+.+++++.+.+...+ .++.+..+...........++++.+++++|++ ++++++++|+++++..++.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~ 82 (373)
T cd06453 5 NAATSQKPQPVIDAIVDYYRHYN--ANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLG 82 (373)
T ss_pred CccccCCCHHHHHHHHHHHHhcC--CCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhh
Confidence 35667889999999999886533 34332111111223445557889999999997 6777779899988887888887
Q ss_pred C---CCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCC
Q 018401 131 K---PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YAR 205 (356)
Q Consensus 131 ~---~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~ 205 (356)
. +||+|++++++|.+...++... ++..|.+++.++ .+ +++.+|++++++++.+ ++++|+++ ++| +|.
T Consensus 83 ~~~~~g~~vl~~~~~~~~~~~~~~~~----~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~tG~ 154 (373)
T cd06453 83 RANKPGDEIVTSVMEHHSNIVPWQQL----AERTGAKLKVVP--VD-DDGQLDLEALEKLLTE-RTKLVAVTHVSNVLGT 154 (373)
T ss_pred hcCCCCCEEEECcchhHHHHHHHHHH----HhhcCcEEEEee--cC-CCCCcCHHHHHHHhcC-CceEEEEeCcccccCC
Confidence 6 9999999999888765433311 223566666664 44 4578999999999987 89999987 666 899
Q ss_pred cccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh---cc-CCcc
Q 018401 206 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI---NK-QGKE 280 (356)
Q Consensus 206 ~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~---~~-~g~~ 280 (356)
..|+++|.++|+++|+++++|++|+.|..+.++...+ +|++++|+||++++ .| |+++++++.... .. +|..
T Consensus 155 ~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~~~~-~g~g~~~~~~~~~~~~~~~~~g~~~ 230 (373)
T cd06453 155 INPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLG---CDFLAFSGHKMLGP-TGIGVLYGKEELLEEMPPYGGGGEM 230 (373)
T ss_pred cCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccC---CCEEEeccccccCC-CCcEEEEEchHHhhcCCCeecCCCc
Confidence 9999999999999999999999999988876665555 89999999999877 56 999988764211 12 2221
Q ss_pred hhhhHHHhhccccCCCC--CCCCcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 281 VFYDYEEKINQAVFPGL--QGGPHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 281 ~~~~~~~~~~~~~~~~~--~gt~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
..............+.. .||+++..+.++.+|++++.+. +++.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~-g~~~~~~ 278 (373)
T cd06453 231 IEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKI-GMEAIAA 278 (373)
T ss_pred cccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHc-CHHHHHH
Confidence 11000000011111222 3799999999999999998763 4444333
No 33
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.94 E-value=1.1e-25 Score=216.86 Aligned_cols=270 Identities=11% Similarity=0.024 Sum_probs=177.1
Q ss_pred cCCeee-cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHH
Q 018401 47 KGLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 47 ~~i~L~-~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~ 125 (356)
+.+.|+ ++..++|+.|.+++.+++.. +.......+ +.+......+.++.++ + +++|+++++++|++|+|+++..+
T Consensus 27 ~~iyld~~a~g~~p~~v~~a~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~ 102 (406)
T TIGR01814 27 AVIYLDGNSLGLMPKAARNALKEELDK-WAKIAIRGH-NTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLL 102 (406)
T ss_pred CcEEecCCCcCcCcHHHHHHHHHHHHH-HHHhhhccC-ccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHH
Confidence 347777 55567899999999887764 211111111 1111111223333333 4 89999998998899999888878
Q ss_pred HHhhcCCCC---eeeecCCCCCcccCcccccccccccccceeeE--EEecccCCCCCCCCHHHHHHHhh--hcCCcEEEE
Q 018401 126 YTALLKPHD---RIMALDLPHGGHLSHGYQTDTKKISAVSIFFE--TMPYRLNESTGYIDYDQLEKSAT--LFRPKLIVA 198 (356)
Q Consensus 126 l~al~~~gd---~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~v~~~~~~~~~~~d~~~l~~~i~--~~~~k~v~l 198 (356)
+.+++++|+ .|++...+|++...++... +...|.+++ .+.++.+ +++.+|++++++.+. ..+|++|++
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~----~~~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~t~lv~~ 177 (406)
T TIGR01814 103 LASFYKPTPKRYKILLEAKAFPSDHYAIESQ----LQLHGLTVEESMVQIEPR-EEETLRLEDILDTIEKNGDDIAVILL 177 (406)
T ss_pred HHHhcCCcCCccEEEecCCCCChHHHHHHHH----HHhcCCCcccceEEeccC-CCCccCHHHHHHHHHhcCCCeEEEEE
Confidence 888776653 5788888998876554311 112344431 1222333 346789999988874 137899988
Q ss_pred c-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCceEEEEecCcc----
Q 018401 199 G-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVK---- 272 (356)
Q Consensus 199 ~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~---- 272 (356)
+ .++ +|.+.|+++|+++|+++|+++++|++|++|.+++++..++ +|++++|+||||+||+||+++++++..
T Consensus 178 ~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~g---vD~~~~s~hK~l~g~pG~~l~v~~~~~~~~~ 254 (406)
T TIGR01814 178 SGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWG---VDFACWCTYKYLNAGPGAGAFVHEKHAHTER 254 (406)
T ss_pred eccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCC---CCEEEEcCccccCCCCCeEEEEehhhhhhcC
Confidence 8 555 8999999999999999999999999999999999987777 999999999999877786666655321
Q ss_pred hhccCCcchh--hhHHHhhccccCCCC--CCCCcHHHHHHHHHHHHHHhcccccchhhccc
Q 018401 273 EINKQGKEVF--YDYEEKINQAVFPGL--QGGPHNHTITGLAVALKQVCTLITFSHIHVFS 329 (356)
Q Consensus 273 ~~~~~g~~~~--~~~~~~~~~~~~~~~--~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~ 329 (356)
+...++.... +.+.........+.+ .||+|+++++++.+|++++.+. ++++++++.
T Consensus 255 p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~-g~~~i~~~~ 314 (406)
T TIGR01814 255 PRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQA-GMEALRKKS 314 (406)
T ss_pred CCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhc-CHHHHHHHH
Confidence 2122211100 000000000011222 4999999999999999999763 555555443
No 34
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.93 E-value=2.7e-24 Score=204.19 Aligned_cols=254 Identities=13% Similarity=0.076 Sum_probs=174.4
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC--ccccCCCchHHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE--KWGGSLSGSPSNFQV 125 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~--~v~v~~sgs~a~~~~ 125 (356)
.+.+++++..+++.|.+++.....+ + + ....++.+.+++.+++++|++++ .+++++|||+++..+
T Consensus 4 ~~l~~pgp~~~~~~v~~~~~~~~~~-~-----~-------~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~ 70 (363)
T TIGR02326 4 YLLLTPGPLTTSRTVKEAMLFDWCT-W-----D-------SDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAV 70 (363)
T ss_pred eeEecCCCCCCCHHHHHHhCCCCCC-C-----C-------hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHH
Confidence 3457788888889999887653311 1 1 12334556789999999999764 566799999999989
Q ss_pred HHhhcCCCCeeeecCC-CCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc-CCcEEEEc-CCC
Q 018401 126 YTALLKPHDRIMALDL-PHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-RPKLIVAG-ASA 202 (356)
Q Consensus 126 l~al~~~gd~Vl~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~-~~k~v~l~-~~n 202 (356)
+.+++.+||.+++... .|+..+ ...++..|.+++.++ .+ +++.+|++++++++++. +++++.++ ..|
T Consensus 71 ~~~l~~~~~~vlv~~~~~~~~~~-------~~~a~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~ 140 (363)
T TIGR02326 71 IGSAVPKDGKLLVVINGAYGARI-------VQIAEYLGIPHHVVD--TG-EVEPPDVVEVEAILAADPAITHIALVHCET 140 (363)
T ss_pred HHhcCCCCCeEEEEeCChhhHHH-------HHHHHHcCCceEEEe--CC-CCCCCCHHHHHHHHhhCCCccEEEEEeecC
Confidence 9999889888776542 222110 012334566666664 43 44678999999998752 35666665 444
Q ss_pred -CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcc
Q 018401 203 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKE 280 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~ 280 (356)
+|...|+++|.++|+++|+++++|++|++|..++++..++ +|++++|+||||+||+| |+++++++..........
T Consensus 141 ~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~---~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~ 217 (363)
T TIGR02326 141 TTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELH---IDYLISSANKCIQGVPGFGFVIARQAELAACKGNAR 217 (363)
T ss_pred CccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcC---ccEEEecCccccccCCcceEEEECHHHHHHhhcCCC
Confidence 8999999999999999999999999999999888877776 99999999999999999 999998753211110000
Q ss_pred -hhhhHHHhhccc-cCCC-CCCCCcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 281 -VFYDYEEKINQA-VFPG-LQGGPHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 281 -~~~~~~~~~~~~-~~~~-~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
...++...+... ..++ ...|++++.+.++.+|++++.++.+++++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~ 267 (363)
T TIGR02326 218 SLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQ 267 (363)
T ss_pred ceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHH
Confidence 000111111000 0112 2247889999999999999876544554443
No 35
>PRK02769 histidine decarboxylase; Provisional
Probab=99.92 E-value=1.4e-23 Score=199.01 Aligned_cols=251 Identities=17% Similarity=0.111 Sum_probs=172.6
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCcc--ccCCCchHHHHHHHHhh--cCCCC
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKW--GGSLSGSPSNFQVYTAL--LKPHD 134 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v--~v~~sgs~a~~~~l~al--~~~gd 134 (356)
+...++.+.....+.+ |++...+..+ ....++++++++++++++|++++++ .||+|||++|..++.+. +.+++
T Consensus 35 ~~~~~~~~~~~~~~n~--gnp~~~~~~g-~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~ 111 (380)
T PRK02769 35 DYSALKRFFSFSINNC--GDPYSKSNYP-LNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDG 111 (380)
T ss_pred CHHHHHHHHHhhhccC--CCccccCCCC-CChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCc
Confidence 3455666666655534 4444422111 1245788899999999999976554 45999999888666544 46789
Q ss_pred eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCC-CCCcccHH
Q 018401 135 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARLYDYE 210 (356)
Q Consensus 135 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k~v~l~-~~n-~g~~~~l~ 210 (356)
+|++++.+|.++..++. ..|.+...|+ .+ +++.+|+++|++++.+. +|.+|+++ .++ +|.+.|++
T Consensus 112 ~ii~s~~~H~Sv~ka~~--------~lg~~~~~V~--~~-~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~ 180 (380)
T PRK02769 112 TLYYSKDTHYSVSKIAR--------LLRIKSRVIT--SL-PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIK 180 (380)
T ss_pred EEEeCCCceehHHHHHH--------HcCCCCceec--cC-CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHH
Confidence 99999999998865432 3344444553 44 46789999999999872 38888887 666 89999999
Q ss_pred HHHHHHHHcC---CEEEEeccchhhhcccCCCC--CCC-CCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhh
Q 018401 211 RIRKVCNKQK---AIMLADMAHISGLVAAGVIP--SPF-EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFY 283 (356)
Q Consensus 211 ~I~~la~~~g---~~vivD~a~~~g~~~~~~~~--~~l-~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~ 283 (356)
+|+++|+++| +++++|+||+.+.+|..-.. ..+ .++|++++|+|||+++|.| |+++++++.........
T Consensus 181 ~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~---- 256 (380)
T PRK02769 181 EIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDV---- 256 (380)
T ss_pred HHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCc----
Confidence 9999999998 69999999999888632111 111 1499999999999888999 99999985211110000
Q ss_pred hHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccc
Q 018401 284 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHV 332 (356)
Q Consensus 284 ~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~ 332 (356)
.++.. ......||.+...++++.++++++-. .+++++.++.+.+
T Consensus 257 ---~yl~~-~d~t~~GSR~g~~~l~lw~aL~~lg~-~G~~~~~~~~~~l 300 (380)
T PRK02769 257 ---DYIGS-RDQTISGSRNGHTALLLWAAIRSLGS-KGLRQRVQHCLDM 300 (380)
T ss_pred ---cccCC-CCCCccCCCCcHHHHHHHHHHHHHCH-HHHHHHHHHHHHH
Confidence 00110 01122489999999999999999865 3565544443333
No 36
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.92 E-value=4.7e-24 Score=204.13 Aligned_cols=205 Identities=14% Similarity=0.079 Sum_probs=156.1
Q ss_pred CCeee--cCCCCCcHHHHHHHHhhhhccCCCCCCCC-ccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 48 GLELI--PSENFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 48 ~i~L~--~~~~~~~~~V~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
.|||. .--+|+++.+++++.++... + +++++ .+..+ .......+++++.+++++|+++ +.+++|+++++.+
T Consensus 20 ~~~~~~~~~~~p~~~~~~~a~~~~~~~-~--~~~~~~~~~~~-~~~~~~~~~l~~~lA~~~g~~~--~~~~~g~t~a~~~ 93 (387)
T PRK09331 20 FINLDPIQRGGILTPEARKALIEYGDG-Y--SVCDYCPGRLD-QIKKPPIADFHEDLAEFLGMDE--ARVTHGAREGKFA 93 (387)
T ss_pred ccccChhhcCCCCCHHHHHHHHHHHhc-c--CCCcccccccc-cccChHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHH
Confidence 46665 33458899999999998743 3 22221 11111 1122334567799999999964 4568899999998
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc------CCcEEEE
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF------RPKLIVA 198 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~------~~k~v~l 198 (356)
++.+++++||+|+++.++|.+.+. .+...|++++.++.+.+ +++.+|++++++++++. ++++|++
T Consensus 94 al~~l~~~gd~Vlv~~~~h~s~~~--------~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l 164 (387)
T PRK09331 94 VMHSLCKKGDYVVLDGLAHYTSYV--------AAERAGLNVREVPKTGY-PEYKITPEAYAEKIEEVKEETGKPPALALL 164 (387)
T ss_pred HHHHhcCCCCEEEECCCchHHHHH--------HHHHcCCEEEEEeCccC-cCCCcCHHHHHHHHHHhhhccCCCCEEEEE
Confidence 999999999999999988876643 23456766766643213 45679999999998742 6889988
Q ss_pred c-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 199 G-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 199 ~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
+ +++ +|.+.|+++|.++|+++|+++++|++|+.|..+.+...++ +|++++|+|||+++|.| |+++++++
T Consensus 165 ~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g---~D~~~~s~~K~l~~~~~~G~l~~~~~ 236 (387)
T PRK09331 165 THVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLG---ADFIVGSGHKSMAASAPSGVLATTEE 236 (387)
T ss_pred ECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcC---CCEEEeeCcccccCCCCEEEEEECHH
Confidence 7 655 8999999999999999999999999999998887766555 99999999999988877 99988873
No 37
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.92 E-value=2.5e-24 Score=222.42 Aligned_cols=274 Identities=15% Similarity=0.102 Sum_probs=182.3
Q ss_pred CCeee-cCCCCCcH-HHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC--ccccCCCchHHHH
Q 018401 48 GLELI-PSENFTSV-SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE--KWGGSLSGSPSNF 123 (356)
Q Consensus 48 ~i~L~-~~~~~~~~-~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~--~v~v~~sgs~a~~ 123 (356)
.+-|+ ++.+++++ .|.+++...+.+.+ +++++.+..+ ....++.+++|+.+++++|++++ +|+||+|+|+++.
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~--~np~s~~~~s-~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~aln 111 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVY--GNPHSQSDSS-MRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALK 111 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhcc--CCCCcCcchh-hhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHH
Confidence 45554 44456555 45555555555433 4444322222 23344556899999999999765 4677999998888
Q ss_pred HHHHhh-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-----CCCCCCH--HHHHHHhh------
Q 018401 124 QVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-----STGYIDY--DQLEKSAT------ 189 (356)
Q Consensus 124 ~~l~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-----~~~~~d~--~~l~~~i~------ 189 (356)
.+..++ +++||+|+++..+|.++..++. . +...|++++.++++... +.+.+++ ++|++.+.
T Consensus 112 lva~~l~~~~gd~Iv~t~~eH~svl~~~~-~----a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~ 186 (805)
T PLN02724 112 LVGETFPWSSESHFCYTLENHNSVLGIRE-Y----ALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKR 186 (805)
T ss_pred HHHHHCCCCCCCeEEEeeccccchHHHHH-H----HHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccc
Confidence 777777 7899999999999999874332 2 12235556666443110 1233433 55666531
Q ss_pred ---hcCCcEEEEc-CCC-CCCcccHHHHHHHHHHc--------CCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCc
Q 018401 190 ---LFRPKLIVAG-ASA-YARLYDYERIRKVCNKQ--------KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 256 (356)
Q Consensus 190 ---~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~--------g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~ 256 (356)
..++++|+++ .+| +|.+.|++.|..+++.. ++++++|+||++|+.++++..++ +|++++|+|||
T Consensus 187 ~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~---~Dfl~~S~HK~ 263 (805)
T PLN02724 187 EDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYP---ADFVVVSFYKI 263 (805)
T ss_pred cccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcC---CCEEEEeccee
Confidence 1256899998 677 89999999776555532 35799999999999999998887 99999999999
Q ss_pred CCCCCc-eEEEEecCc----chhccCCcchhhhHHH--h-hccccCCCC--CCCCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 257 LRGPRG-AMIFFRKGV----KEINKQGKEVFYDYEE--K-INQAVFPGL--QGGPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 257 l~gp~g-G~l~~~~~~----~~~~~~g~~~~~~~~~--~-~~~~~~~~~--~gt~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
++||.| |+++++++. .+.+.+|+.+.+.... . ......+.+ .||+|+++++++.+|++++.+ .++++++
T Consensus 264 ~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~-ig~~~I~ 342 (805)
T PLN02724 264 FGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNR-LTISAIA 342 (805)
T ss_pred ccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHH-hChHHHH
Confidence 888999 999999864 2335555443111100 0 001111223 399999999999999999986 5677666
Q ss_pred cccccch
Q 018401 327 VFSLHVY 333 (356)
Q Consensus 327 ~~~~~~~ 333 (356)
++...+.
T Consensus 343 ~~~~~L~ 349 (805)
T PLN02724 343 MHTWALT 349 (805)
T ss_pred HHHHHHH
Confidence 6544443
No 38
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.91 E-value=3.1e-23 Score=197.24 Aligned_cols=249 Identities=13% Similarity=0.083 Sum_probs=172.9
Q ss_pred eeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCC--CccccCCCchHHHHHHHH
Q 018401 50 ELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP--EKWGGSLSGSPSNFQVYT 127 (356)
Q Consensus 50 ~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~--~~v~v~~sgs~a~~~~l~ 127 (356)
.+++++..+++.+++++...... + . ....+..+.+++.+++++|+++ +.+++++||+.++..++.
T Consensus 8 ~~~pgP~~~~~~~~~a~~~~~~~-~-----~-------~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~ 74 (368)
T PRK13479 8 LLTPGPLTTSRTVREAMLRDWGS-W-----D-------DDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIG 74 (368)
T ss_pred eecCCCCCCCHHHHHHhCCCCCC-C-----C-------hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHH
Confidence 46777778899999888664311 1 0 1122455688899999999965 345569999999998999
Q ss_pred hhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc-CCcEEEEc-CCC-CC
Q 018401 128 ALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-RPKLIVAG-ASA-YA 204 (356)
Q Consensus 128 al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~-~~k~v~l~-~~n-~g 204 (356)
++..+||.|++....+.+.. + ...++..|++++.++ .+ +++.+|++++++++++. ++++|.++ ++| +|
T Consensus 75 ~l~~~~~~vlv~~~~~~~~~--~----~~~~~~~g~~~~~i~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG 145 (368)
T PRK13479 75 SLVPRDGKVLVPDNGAYGAR--I----AQIAEYLGIAHVVLD--TG-EDEPPDAAEVEAALAADPRITHVALVHCETTTG 145 (368)
T ss_pred hccCCCCeEEEEeCCchHHH--H----HHHHHHcCCcEEEEE--CC-CCCCCCHHHHHHHHHhCCCCcEEEEEcccCccc
Confidence 99999999998764322110 0 112344576676664 43 34678999999998751 45677776 555 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchh-
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVF- 282 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~- 282 (356)
...|+++|.++|+++|+++++|++|++|..+.++..++ +|++++|+|||++||.| |+++++++...........+
T Consensus 146 ~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~---~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~ 222 (368)
T PRK13479 146 ILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELG---IDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLS 222 (368)
T ss_pred cccCHHHHHHHHHHcCCEEEEEcccccCCccccccccC---ceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCee
Confidence 99999999999999999999999999998877776666 89999999999999999 99999885422211111111
Q ss_pred hhHHHhhccccCC-CCCCCCcHHHHHHHHHHHHHHhcccccc
Q 018401 283 YDYEEKINQAVFP-GLQGGPHNHTITGLAVALKQVCTLITFS 323 (356)
Q Consensus 283 ~~~~~~~~~~~~~-~~~gt~~~~~~~al~~Al~~~~~~~~~~ 323 (356)
.++.......... ....|++++.++++.+|++.+.+..+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~ 264 (368)
T PRK13479 223 LDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVP 264 (368)
T ss_pred ecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHH
Confidence 0111111111111 1124889999999999999886654333
No 39
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.91 E-value=6.4e-23 Score=185.88 Aligned_cols=238 Identities=19% Similarity=0.194 Sum_probs=170.4
Q ss_pred cCCeeecCCC--CCcHHHHHHHHhhhhcc-CCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHH
Q 018401 47 KGLELIPSEN--FTSVSVMQAVGSVMTNK-YSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~--~~~~~V~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a 121 (356)
+.+.|--.+- ++||+|++++.+.+++. | ||+.. .+++.+++..|.++.++. +++.++++.+..-+
T Consensus 26 DvlPmWVADMDf~~pp~i~~Al~~rvdhGvf--GY~~~--------~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpg 95 (388)
T COG1168 26 DVLPMWVADMDFPTPPEIIEALRERVDHGVF--GYPYG--------SDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPG 95 (388)
T ss_pred CcceeeeecccCCCCHHHHHHHHHHHhcCCC--CCCCC--------CHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHh
Confidence 3455533332 47999999999999875 4 66633 356778899999999998 44554456677778
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
+..+++++.+|||.|++..|-| +.+...++..|.++...|+..+...+.+|+++|++++.+.++|++++| |
T Consensus 96 i~~~I~~~T~~gd~Vvi~tPvY--------~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnP 167 (388)
T COG1168 96 ISLAIRALTKPGDGVVIQTPVY--------PPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNP 167 (388)
T ss_pred HHHHHHHhCcCCCeeEecCCCc--------hHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCC
Confidence 8889999999999999998544 333346677888887776655434568899999999988678998888 9
Q ss_pred CC-CCCcc---cHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC-------CccEEEeCCCCcCC--CCCceEEEE
Q 018401 201 SA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-------YADVVTTTTHKSLR--GPRGAMIFF 267 (356)
Q Consensus 201 ~n-~g~~~---~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~-------~~D~~~~s~~K~l~--gp~gG~l~~ 267 (356)
+| +|.++ ++.+|.+||++||+.||+|+.|+-- +..+..+.++. ..-+.+.|++|+|+ |.+.+.+++
T Consensus 168 HNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDl-v~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii 246 (388)
T COG1168 168 HNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADL-VLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIII 246 (388)
T ss_pred CCCCCccccHHHHHHHHHHHHHcCCEEEeecccccc-cccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEe
Confidence 99 89666 5778899999999999999999633 22222222221 23378888999884 555577777
Q ss_pred ecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 268 RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 268 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
.++ ++..+..........+.+|.+++.|..+|+++=
T Consensus 247 ~n~-------------~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G 282 (388)
T COG1168 247 SNR-------------ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG 282 (388)
T ss_pred cCH-------------HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc
Confidence 664 443333222222345789999999999988543
No 40
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.91 E-value=7.4e-23 Score=194.21 Aligned_cols=200 Identities=16% Similarity=0.109 Sum_probs=147.7
Q ss_pred ecCCCCCcHHHHHHHHhhhhccCCCCCCCC-ccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc
Q 018401 52 IPSENFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL 130 (356)
Q Consensus 52 ~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~ 130 (356)
+.+..++.+.+++++.++... + ++++. .+..+ ........++++.+++++|+ +++++++|+++++..++.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~-~~~~~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~ 80 (361)
T cd06452 7 IQRGGRLTPEARKALIEWGDG-Y--SVCDFCRGRLD-EIEKPPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLC 80 (361)
T ss_pred hhcCCCCCHHHHHHHHHHhcc-c--CCccccccccc-cccCchHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhc
Confidence 345567889999999887743 2 22211 11011 01112334567999999999 456778899999998999999
Q ss_pred CCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC-CCCCCHHHHHHHhhh------cCCcEEEEc-CCC
Q 018401 131 KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TGYIDYDQLEKSATL------FRPKLIVAG-ASA 202 (356)
Q Consensus 131 ~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~i~~------~~~k~v~l~-~~n 202 (356)
++||+|+++.++|.+.+. .+...|+.++.++ .+.+ ++.+|++++++++.+ .++++|+++ ++|
T Consensus 81 ~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n 150 (361)
T cd06452 81 EKGDWVVVDGLAHYTSYV--------AAERAGLNVREVP--NTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDG 150 (361)
T ss_pred CCCCEEEEcCCcchHHHH--------HHHhcCCEEEEEe--cCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCC
Confidence 999999999877766532 2345676666664 4422 348999999998863 268899888 666
Q ss_pred -CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 203 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
+|...|+++|.++|+++|+++|+|++|+.|..+......+ +|++++|+||++++|.+ |+++++++
T Consensus 151 ~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~---~d~~~~s~~K~l~~~~~~G~l~~~~~ 217 (361)
T cd06452 151 NYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELG---ADFIVGSGHKSMAASAPIGVLATTEE 217 (361)
T ss_pred CCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcC---CCEEEecCCccccCCCCeEEEEECHH
Confidence 8999999999999999999999999999887665544444 89999999999977666 98888773
No 41
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=2.3e-22 Score=191.65 Aligned_cols=239 Identities=18% Similarity=0.171 Sum_probs=173.8
Q ss_pred cCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCc-cccCCCchHH
Q 018401 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEK-WGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~-v~v~~sgs~a 121 (356)
+.|+|..+++ ++|+.+++++.+++.+.. . +|....+..+|++++.+++.+.+|. ++++ |++|+|++++
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~----~---~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~a 101 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGG----T---HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEA 101 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhccc----C---CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHH
Confidence 4789988877 678999999999887621 1 2335577899999999999999985 5655 7779999999
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
+..+++++++|||+|++++ |.|+.+...+.+.|+.++.+++.....++.+|+++|++++++ +||+|+++ |
T Consensus 102 l~~~~~a~~~pGDeVlip~--------P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~P 172 (393)
T COG0436 102 LFLAFLALLNPGDEVLIPD--------PGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIILNSP 172 (393)
T ss_pred HHHHHHHhcCCCCEEEEeC--------CCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEEeCC
Confidence 9999999999999999999 566655657788898887775433213689999999999998 99999998 8
Q ss_pred CC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC-CCCCC--CCC---ccEEEeCCCCcCC--CCCceEEEEe
Q 018401 201 SA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSP--FEY---ADVVTTTTHKSLR--GPRGAMIFFR 268 (356)
Q Consensus 201 ~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~-~~~~~--l~~---~D~~~~s~~K~l~--gp~gG~l~~~ 268 (356)
+| ||.+.+ +++|+++|++||+++|+|++.. +...-+ ..... +.+ .-+.+.|.+|.++ |-+-|+++.+
T Consensus 173 ~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~-~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~ 251 (393)
T COG0436 173 NNPTGAVYSKEELKAIVELAREHDIIIISDEIYE-ELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGP 251 (393)
T ss_pred CCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhh-hcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecC
Confidence 88 996665 7788999999999999999964 322222 11111 111 2377889999763 4444999988
Q ss_pred cCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 269 KGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 269 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
++ ++.+.+... .......++.+.-.|..+||+.-
T Consensus 252 ~~-------------~l~~~~~~~-~~~~~~~~~~~~Q~aa~~aL~~~ 285 (393)
T COG0436 252 PE-------------ELIAALRKL-KSYLTSCAPTPAQYAAIAALNGP 285 (393)
T ss_pred hH-------------HHHHHHHHH-HHhcccCCCHHHHHHHHHHhcCc
Confidence 32 344433311 11223455566666666777644
No 42
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.90 E-value=2.5e-22 Score=183.73 Aligned_cols=229 Identities=16% Similarity=0.148 Sum_probs=170.7
Q ss_pred cccccccChHHHHHHHHHHHHHHcCCe-eecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHH
Q 018401 24 NAPLEVVDPEIADIIEHEKARQWKGLE-LIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (356)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~-L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 100 (356)
++++....+++|..+.+...+ ....+ |.++.. ++|+.|.+++++.+.+.. ...|+...+..+|.+++++.
T Consensus 9 ~~~l~~~~~~vw~e~~~la~e-~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~------~~qYt~~~G~p~L~~aL~k~ 81 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAAE-HKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPS------TNQYTRGYGLPQLRKALAKA 81 (420)
T ss_pred cccccccCCcHHHHHHHHHHh-cCCCCcccCCCCCCCCcHHHHHHHHHHhccch------hccccccCCchHHHHHHHHH
Confidence 455667778999999987544 33344 776655 578899999999887732 22334445678899999999
Q ss_pred HHHHcCC--CC-CccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEeccc-----
Q 018401 101 ALEAFRL--DP-EKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL----- 172 (356)
Q Consensus 101 la~~~g~--~~-~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----- 172 (356)
+++++|. .+ ++|.||.|+.+++..++++++++||+|++.+|.|. .|...+.++|...+.|+...
T Consensus 82 ~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd--------~Y~~~~~maG~tpv~v~~~~~~g~~ 153 (420)
T KOG0257|consen 82 YSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFD--------CYIPQVVMAGGTPVFVPLKPKEGNV 153 (420)
T ss_pred HHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcch--------hhhhHHhhcCCcceeeccccccccc
Confidence 9999987 34 46777999999999999999999999999995554 44446778898887776541
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcc---cHHHHHHHHHHcCCEEEEeccchhhhcccC----CCCCC-
Q 018401 173 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSP- 242 (356)
Q Consensus 173 ~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~I~~la~~~g~~vivD~a~~~g~~~~~----~~~~~- 242 (356)
..+++.+|.++++.++++ +||+|++| |+| +|.+. .|++|++||++||+++|+|++...-..... +.-+|
T Consensus 154 ~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPg 232 (420)
T KOG0257|consen 154 SSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPG 232 (420)
T ss_pred cCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCc
Confidence 135689999999999998 99999998 888 89665 488999999999999999999643322211 11111
Q ss_pred CCCccEEEeCCCCcCCCCCc---eEEEEec
Q 018401 243 FEYADVVTTTTHKSLRGPRG---AMIFFRK 269 (356)
Q Consensus 243 l~~~D~~~~s~~K~l~gp~g---G~l~~~~ 269 (356)
+...-+-++|+.|++ |..| |.++..+
T Consensus 233 m~ertitvgS~gKtf-~~TGWrlGW~igp~ 261 (420)
T KOG0257|consen 233 MYERTITVGSFGKTF-GVTGWRLGWAIGPK 261 (420)
T ss_pred hhheEEEecccccee-eeeeeeeeeeechH
Confidence 223568899999976 4444 8888844
No 43
>PLN03032 serine decarboxylase; Provisional
Probab=99.90 E-value=1.5e-21 Score=184.01 Aligned_cols=199 Identities=16% Similarity=0.130 Sum_probs=150.7
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCcc--ccCCCchHHHHHHHHhhc--CCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKW--GGSLSGSPSNFQVYTALL--KPH 133 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v--~v~~sgs~a~~~~l~al~--~~g 133 (356)
..+.+++++...+.+.+ |+|.+.+..+ ....++++++++++++++|++++++ +||+|||++|..++.+.. .++
T Consensus 35 ~~~~~~~~~~~~~~~~~--gnP~s~~~~g-~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~ 111 (374)
T PLN03032 35 FDYGELSQLMKYSINNL--GDPFIESNYG-VHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPD 111 (374)
T ss_pred cChHHHHHHHHhcccCC--CCCcccCCCC-ccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCC
Confidence 45567888888877645 6666633222 2356788899999999999988766 679999999987776543 356
Q ss_pred CeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCC-CCCcccH
Q 018401 134 DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARLYDY 209 (356)
Q Consensus 134 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k~v~l~-~~n-~g~~~~l 209 (356)
..|+++..+|.++... +...|.+++.| +++ +++.+|+++|++++.+. +|.+|+++ .++ +|.+.|+
T Consensus 112 ~~vi~s~~~H~Sv~ka--------a~~lg~~~~~V--~~d-~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi 180 (374)
T PLN03032 112 GILYASRESHYSVFKA--------ARMYRMEAVKV--PTL-PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDL 180 (374)
T ss_pred cEEEeCCCceeHHHHH--------HHHcCCCCeEe--eeC-CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCH
Confidence 7899999999888653 33445555556 455 56899999999999762 36677776 555 8999999
Q ss_pred HHHHHHHHHcC-----CEEEEeccchhhhcccCCCCC--CC-CCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 210 ERIRKVCNKQK-----AIMLADMAHISGLVAAGVIPS--PF-EYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 210 ~~I~~la~~~g-----~~vivD~a~~~g~~~~~~~~~--~l-~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
++|+++|+++| +++++|+|++.+.++...... .+ .++|.+++|+||+++.|.| |+++++++
T Consensus 181 ~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~ 250 (374)
T PLN03032 181 DRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKK 250 (374)
T ss_pred HHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEch
Confidence 99999999997 589999999988887532111 11 2499999999997777999 99999984
No 44
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.90 E-value=6.7e-22 Score=186.89 Aligned_cols=247 Identities=17% Similarity=0.144 Sum_probs=167.5
Q ss_pred eecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC--ccccCCCchHHHHHHHHh
Q 018401 51 LIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE--KWGGSLSGSPSNFQVYTA 128 (356)
Q Consensus 51 L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~--~v~v~~sgs~a~~~~l~a 128 (356)
+.+++..+++.|++++...... + . ....++.+.+++.+++++|+++. .+++++||++++..++.+
T Consensus 3 ~~p~p~~~~~~~~~~~~~~~~~-~------~------~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~ 69 (355)
T TIGR03301 3 LTPGPLSTSATVRDAMLVDWCH-W------D------SEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGS 69 (355)
T ss_pred CcCCCCCCCHHHHHHhhhhccC-C------C------HHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHh
Confidence 4566777899999999873221 1 0 11235667889999999999765 345589999999989999
Q ss_pred hcCCCCeeeecCC-CCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc-CCcEEEEc-CCC-CC
Q 018401 129 LLKPHDRIMALDL-PHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-RPKLIVAG-ASA-YA 204 (356)
Q Consensus 129 l~~~gd~Vl~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~-~~k~v~l~-~~n-~g 204 (356)
++.+||+|++... .|+..+ ...+...|..+..++ .+ +++.+|++++++.+.++ ++++++++ ++| +|
T Consensus 70 ~~~~~~~vi~~~~~~~~~~~-------~~~a~~~g~~~~~i~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G 139 (355)
T TIGR03301 70 LVPRDGKLLVLINGAYGERL-------AKICEYLGIPHTDLN--FS-EYEPPDLNRIEEALAADPDITHVATVHHETTTG 139 (355)
T ss_pred ccCCCCeEEEECCCchhhHH-------HHHHHHcCCceEEEe--cC-CCCCCCHHHHHHHHHhCCCceEEEEEecCCccc
Confidence 9888988776553 222211 112234566665564 43 34678999999998751 34556555 444 79
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCc-chh
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGK-EVF 282 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~-~~~ 282 (356)
...|+++|.++|++||+++|+|++|+.|..+.++...+ +|++++|+|||++||.| |+++++++......... ..+
T Consensus 140 ~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~---~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~ 216 (355)
T TIGR03301 140 ILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELD---VDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLY 216 (355)
T ss_pred chhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcC---ccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCce
Confidence 99999999999999999999999999998776665555 99999999999999999 99999885321111100 000
Q ss_pred hhHHHhhccccC-CCCCCCCcHHHHHHHHHHHHHHhcccccc
Q 018401 283 YDYEEKINQAVF-PGLQGGPHNHTITGLAVALKQVCTLITFS 323 (356)
Q Consensus 283 ~~~~~~~~~~~~-~~~~gt~~~~~~~al~~Al~~~~~~~~~~ 323 (356)
.++...+..... ....+|++...+.++.++++.+.++..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~ 258 (355)
T TIGR03301 217 LDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVP 258 (355)
T ss_pred eeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHH
Confidence 011111110000 11236889999999999999987653344
No 45
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.89 E-value=6.3e-22 Score=188.38 Aligned_cols=236 Identities=15% Similarity=0.105 Sum_probs=164.3
Q ss_pred eecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc
Q 018401 51 LIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL 130 (356)
Q Consensus 51 L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~ 130 (356)
|.....++.|.+++++.+.+.... +.+.. +. ....+.+++++++++++|+++.++++++||++++..++.++.
T Consensus 25 ~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~--~~---~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~ 97 (371)
T PRK13520 25 LSSMCTEPHPIARKAHEMFLETNL--GDPGL--FP---GTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAAR 97 (371)
T ss_pred eeeeecCchHHHHHHHHHHHhcCC--CCccc--Cc---cHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHH
Confidence 555566778899999988876532 23221 22 234555688999999999977666778899999987776664
Q ss_pred C----CCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 131 K----PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 131 ~----~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
. +||+|++++.+|.++.. .+...|..++.++ .+ +++.+|+++|++++++ ++++|+++ ++| +|
T Consensus 98 ~~~~~~~~~vl~~~~~h~s~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~vi~~~~~~~tG 165 (371)
T PRK13520 98 NLAKAEKPNIVVPESAHFSFDK--------AADMLGVELRRAP--LD-DDYRVDVKAVEDLIDD-NTIGIVGIAGTTELG 165 (371)
T ss_pred hhccCCCceEEecCcchHHHHH--------HHHHcCceEEEec--CC-CCCcCCHHHHHHHHhh-CCEEEEEEcCCcCCc
Confidence 3 58999999988765432 3334566666664 44 4568899999999987 67766655 544 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCC--C--CCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCc
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--S--PFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGK 279 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~--~--~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~ 279 (356)
.+.|+++|.++|+++|+++++|++|+.+..+..... . ...++|++++++|||+.+|.+ |+++++++
T Consensus 166 ~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~--------- 236 (371)
T PRK13520 166 QVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDE--------- 236 (371)
T ss_pred ccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCH---------
Confidence 999999999999999999999999987765432211 1 122589999999998776655 77776553
Q ss_pred chhhhHHHhhccc--cCC-----CCCCCCcHHHHHHHHHHHHHHhc
Q 018401 280 EVFYDYEEKINQA--VFP-----GLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 280 ~~~~~~~~~~~~~--~~~-----~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++.+.+... ... ...||++...++++.++++.+.+
T Consensus 237 ----~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~ 278 (371)
T PRK13520 237 ----SYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGR 278 (371)
T ss_pred ----HHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcH
Confidence 233322110 000 11267777788888899988754
No 46
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.89 E-value=1.4e-22 Score=193.29 Aligned_cols=252 Identities=11% Similarity=0.037 Sum_probs=169.5
Q ss_pred cCCeeecCCCCCcHH-HHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCcccc-CCCchHHHH
Q 018401 47 KGLELIPSENFTSVS-VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGG-SLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~-V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v-~~sgs~a~~ 123 (356)
...+|+++...++|. |++++.+.+... .++ . ....++.+.+|+.+++++|++ +.+++| ++|||.++.
T Consensus 12 ~~~~f~~Gp~~~~~~~v~~a~~~~~~~~-----~hr---~--~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~ 81 (378)
T PRK03080 12 ADPRFSSGPCKKRPGWQLEALADALLGR-----SHR---Q--KPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWE 81 (378)
T ss_pred CCCCcCCCCcCCChHHHHHHHHhhhccc-----CcC---C--HHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHH
Confidence 456788888888888 999998654321 011 1 234566678999999999984 446777 569999999
Q ss_pred HHHHhhcCC-CCeeeecCCCCCcccCcccccccccccccce-eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 124 QVYTALLKP-HDRIMALDLPHGGHLSHGYQTDTKKISAVSI-FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 124 ~~l~al~~~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
+++.+++++ ++.|++ ..+|++.. ... ..+..|. +++.++ .+ .+..+|+++++ . +++|.++ .
T Consensus 82 ~~~~~l~~~~~~~vi~-~g~f~~~~---~~~---~~~~~g~~~v~~~~--~~-~g~~~d~~~i~----~--~~~V~~~h~ 145 (378)
T PRK03080 82 MALWSLLGARRVDHLA-WESFGSKW---ATD---VVKQLKLEDPRVLE--AD-YGSLPDLSAVD----F--DRDVVFTWN 145 (378)
T ss_pred HHHHhcCCCCcceEEE-eCHHHHHH---HHH---HHhhcCCCCceEec--cC-CCCCCCHhhcC----C--CCCEEEEec
Confidence 888888875 445554 45666532 210 0112354 555553 33 34567777633 2 4567776 4
Q ss_pred CC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh----
Q 018401 201 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI---- 274 (356)
Q Consensus 201 ~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~---- 274 (356)
++ +|...|+++|++ +++|+++++|++|++|..++++.. +|++++|+||||+||+| |+++++++....
T Consensus 146 ~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~-----iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~ 218 (378)
T PRK03080 146 GTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK-----LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESY 218 (378)
T ss_pred CCccceeccchhhcc--ccCCCeEEEecccccccCCCCHHH-----CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcc
Confidence 44 899999999999 889999999999999999988764 79999999999999999 999999865221
Q ss_pred ccCCcch-hhhHHH---hhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhccccc
Q 018401 275 NKQGKEV-FYDYEE---KINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLH 331 (356)
Q Consensus 275 ~~~g~~~-~~~~~~---~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~ 331 (356)
..++... .+++.. ........+..+|+++.++.++.+|++++.+..++++++++...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~ 279 (378)
T PRK03080 219 TPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAA 279 (378)
T ss_pred cCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 1222111 111111 11111112344788999999999999999875466655544333
No 47
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.89 E-value=8.9e-22 Score=188.90 Aligned_cols=236 Identities=17% Similarity=0.160 Sum_probs=165.5
Q ss_pred HcCCeeecCCC---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHH
Q 018401 46 WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 46 ~~~i~L~~~~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~ 122 (356)
++.|+|..++- ..+|++++++.+++.. +..+++++++..|. ..+..++++.+++++|.+. +++++||++++
T Consensus 38 ~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~-~~~~~~~s~~~~G~---~~~~~~le~~ia~~~g~~~--~ii~~~~~~a~ 111 (393)
T TIGR01822 38 REVLNFCANNYLGLSSHPDLIQAAKDALDE-HGFGMSSVRFICGT---QDIHKELEAKIAAFLGTED--TILYASCFDAN 111 (393)
T ss_pred ceEEEeeCCCccccCCCHHHHHHHHHHHHH-hCCCCCCcCcccCC---hHHHHHHHHHHHHHhCCCc--EEEECchHHHH
Confidence 34688877753 2489999999999876 33367777665543 3344556689999999853 45567888888
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh---c--CCcEEE
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---F--RPKLIV 197 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~---~--~~k~v~ 197 (356)
..++.+++++||+|++++++|.++.. .+.+.+... +. . ..+|++++++++++ . ++++|+
T Consensus 112 ~~~~~~l~~~gd~vi~~~~~~~s~~~--------~~~~~~~~~--~~--~----~~~d~~~l~~~i~~~~~~~~~~~~v~ 175 (393)
T TIGR01822 112 GGLFETLLGAEDAIISDALNHASIID--------GVRLCKAKR--YR--Y----ANNDMADLEAQLKEARAAGARHRLIA 175 (393)
T ss_pred HHHHHHhCCCCCEEEEeccccHHHHH--------HHHhcCCce--EE--e----CCCCHHHHHHHHHhhhhcCCCceEEE
Confidence 88888999999999999988887654 222333222 21 1 13689999988874 2 577777
Q ss_pred Ec-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCC----CCCC-CCccEEEeCCCCcCCCCCceEEEEecC
Q 018401 198 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKG 270 (356)
Q Consensus 198 l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~----~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~~ 270 (356)
++ ..| +|.+.|+++|+++|++||+++|+|++|+.|....... ..++ .++|++++|+||+++|+++|+++.++
T Consensus 176 ~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~~~- 254 (393)
T TIGR01822 176 TDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTARK- 254 (393)
T ss_pred EeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEeCH-
Confidence 76 445 8999999999999999999999999998776532110 0111 14899999999999888889988876
Q ss_pred cchhccCCcchhhhHHHhhccccCCCCC-CCCcHHHHHHHHHHHHHHh
Q 018401 271 VKEINKQGKEVFYDYEEKINQAVFPGLQ-GGPHNHTITGLAVALKQVC 317 (356)
Q Consensus 271 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~-gt~~~~~~~al~~Al~~~~ 317 (356)
++.+.+.....+..+ ++.+...++++.+|++.+.
T Consensus 255 -------------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 289 (393)
T TIGR01822 255 -------------EVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLE 289 (393)
T ss_pred -------------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh
Confidence 444444332222222 5566666667778887764
No 48
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.89 E-value=1.9e-21 Score=184.36 Aligned_cols=217 Identities=17% Similarity=0.082 Sum_probs=151.1
Q ss_pred CCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCC
Q 018401 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPH 133 (356)
Q Consensus 54 ~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~g 133 (356)
+-+++|++|++++.++..+ + . ..+++.+++++++++++|++ ++++++|+|+++.+++.+++++|
T Consensus 21 g~s~~~~~v~~a~~~~~~~-~----------~---~~~~~~~~~~~~~a~~~g~~--~~~~~~g~t~al~~al~al~~~G 84 (363)
T TIGR01437 21 GVSTVSDEVADAQKRGAQN-Y----------F---EIKELVNKTGEYIANLLGVE--DAVIVSSASAGIAQSVAAVITRG 84 (363)
T ss_pred CCCCCCHHHHHHHHHHHhc-C----------C---CHHHHHHHHHHHHHHhhCCC--eEEEEcCHHHHHHHHHHHHhcCC
Confidence 3446799999999998754 2 0 13466778889999999986 34669999999998999999999
Q ss_pred C---------------eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE-
Q 018401 134 D---------------RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV- 197 (356)
Q Consensus 134 d---------------~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~- 197 (356)
| +|+++.+.+..+..++ ...+.+.|++++.+ +.+ +.+|++++++++++ +|++++
T Consensus 85 d~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~----~~~~~~~g~~~v~v--~~~---~~~d~~~le~ai~~-~t~ai~~ 154 (363)
T TIGR01437 85 NRYLVENLHDSKIEVNEVVLPKGHNVDYGAPV----ETMVRLGGGKVVEA--GYA---NECSAEQLEAAITE-KTAAILY 154 (363)
T ss_pred CcchhhcccccccccceEEEECccchhcCCch----HHHHHhcCCeEEEE--cCC---CCCCHHHHHHhcCh-hceEEEE
Confidence 9 6665542221111011 12344567666444 443 46899999999987 899766
Q ss_pred Ec-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCceEEEEecCcchhc
Q 018401 198 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN 275 (356)
Q Consensus 198 l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~ 275 (356)
++ ++| +|.+.|+++|+++|++||+++|+|++|+.... ..... ++|++++|+||+|.||++|+++.++
T Consensus 155 v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~~--~~~~~---g~D~~~~S~~K~l~gp~~G~l~~~~------ 223 (363)
T TIGR01437 155 IKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDLQ--KYYRL---GADLVIYSGAKAIEGPTSGLVLGKK------ 223 (363)
T ss_pred EecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCchH--HHHHc---CCCEEEEeCCcccCCCceEEEEEcH------
Confidence 44 566 78899999999999999999999999973210 01122 3899999999999999999888765
Q ss_pred cCCcchhhhHHHhhccccC----CCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 276 KQGKEVFYDYEEKINQAVF----PGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~----~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++.+.+..... ....|+ ..++++.+|++++.+
T Consensus 224 --------~~i~~~~~~~~~~~~~~~~~~---~~~~gl~aAl~~~~~ 259 (363)
T TIGR01437 224 --------KYIEWVKLQSKGIGRAMKVGK---ENILGLTAALEQYLS 259 (363)
T ss_pred --------HHHHHHHhccCCCcceeccCH---HHHHHHHHHHHHHHc
Confidence 33333211100 001233 447888899998875
No 49
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.88 E-value=2.1e-22 Score=190.47 Aligned_cols=266 Identities=13% Similarity=0.083 Sum_probs=167.2
Q ss_pred CeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCC-Cc--hhHHHHHHHHHHHHHHHcCC-CCCccccC-CCchHHHH
Q 018401 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYG-GN--EYIDMAESLCQKRALEAFRL-DPEKWGGS-LSGSPSNF 123 (356)
Q Consensus 49 i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~-~~--~~~~~l~~~~~~~la~~~g~-~~~~v~v~-~sgs~a~~ 123 (356)
++|++++.++|+.|++++.+++.+ +. ++++-.+. ++ ....++.+++|+.+++++|+ ++.+++|+ +|+|+++.
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~ 77 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFA 77 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHH
Confidence 468899999999999999998854 21 22221111 11 22345567899999999998 55677775 55999999
Q ss_pred HHHHhhcC---CCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCC-HHHHHHHhhhcCCcEEEEc
Q 018401 124 QVYTALLK---PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID-YDQLEKSATLFRPKLIVAG 199 (356)
Q Consensus 124 ~~l~al~~---~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d-~~~l~~~i~~~~~k~v~l~ 199 (356)
+++.+++. +||.|++....|.+ ...++..|.+++.++. +......+ .+..+..+++ ++++|.++
T Consensus 78 ~~~~~l~~~~~~~~~i~~g~~~~~~---------~~~a~~~g~~~~~~~~--~~~g~~~~~~~~~~~~~~~-~~~lV~~~ 145 (355)
T cd00611 78 AVPLNLLGDKGTADYVVTGAWSAKA---------AKEAKRYGGVVVIVAA--KEEGKYTKIPDVETWDLAP-DAAYVHYC 145 (355)
T ss_pred HHHHhcCCCCCeEEEEECCHHHHHH---------HHHHHhcCCCcEEEec--ccccCCCCCCCHhhcCCCC-CCCEEEEe
Confidence 89999877 56666543321111 1112334556666643 21111213 2222233554 89999887
Q ss_pred -CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhcc
Q 018401 200 -ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 276 (356)
Q Consensus 200 -~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 276 (356)
.+| +|...+ ++++.||+++++|++|++|+.++++..+ |++++|+||++ ||+| |++++++++.....
T Consensus 146 h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~~~-----~~~~ss~~K~l-GP~G~g~l~~~~~~~~~~~ 214 (355)
T cd00611 146 SNETIHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSKF-----GVIYAGAQKNL-GPAGVTVVIVRKDLLGKAR 214 (355)
T ss_pred CCcccccEEcc-----eecccCCCeEEEEccccccCCCCCHHHh-----CEEEeeccccc-CCCceEEEEECHHHHhhcc
Confidence 555 787632 4555699999999999999999988764 45667799965 7999 99999986432111
Q ss_pred CCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhhccc
Q 018401 277 QGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 343 (356)
Q Consensus 277 ~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (356)
.......++..... .. ...||||++++++|.+|++++.+..++++++++...+...+..+....
T Consensus 215 ~~~~~~~~~~~~~~--~~-~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~ 278 (355)
T cd00611 215 KITPSMLNYKTHAD--NN-SLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNS 278 (355)
T ss_pred cCCCCcccHHHHHh--cC-CCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 10111011111001 11 125899999999999999999875467777666555554444444433
No 50
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.88 E-value=8.8e-22 Score=173.03 Aligned_cols=282 Identities=17% Similarity=0.132 Sum_probs=199.5
Q ss_pred eeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC-ccccCCCchHHHHHHHHh
Q 018401 50 ELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE-KWGGSLSGSPSNFQVYTA 128 (356)
Q Consensus 50 ~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~-~v~v~~sgs~a~~~~l~a 128 (356)
.|.+++..+|+.|++++..-... +.+ .....+.+++++-++..|..... ..++.++|+.+...++..
T Consensus 20 L~gPGPsnl~~~V~~A~~~~~lg-----h~s-------Pe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N 87 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQEAMSRPSLG-----HMS-------PEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVN 87 (385)
T ss_pred eecCCCcCCCHHHHHhhcCCccc-----cCC-------HHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHh
Confidence 67788888999999999764432 222 22345667788999999998544 344588999999999999
Q ss_pred hcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc--CCCCCCc
Q 018401 129 LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--ASAYARL 206 (356)
Q Consensus 129 l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~--~~n~g~~ 206 (356)
++.|||.|++... +. |-.......+..|+.+.+| +.+ .+....++++.+++.++++++++++ .+.||..
T Consensus 88 ~lePgd~vLv~~~---G~---wg~ra~D~~~r~ga~V~~v--~~~-~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~ 158 (385)
T KOG2862|consen 88 LLEPGDNVLVVST---GT---WGQRAADCARRYGAEVDVV--EAD-IGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVL 158 (385)
T ss_pred hcCCCCeEEEEEe---ch---HHHHHHHHHHhhCceeeEE--ecC-cccCccHHHHHHHHHhcCCceEEEEecCcccccc
Confidence 9999999998762 11 1111122344567777777 343 4468899999999999999999987 6669999
Q ss_pred cc-HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhc----cCCcc
Q 018401 207 YD-YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN----KQGKE 280 (356)
Q Consensus 207 ~~-l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~----~~g~~ 280 (356)
.| ++.+.++|++|+++++||.+.+.|..++.+++++ +|+..+.++|.|++|.| +.+.+++.....+ .....
T Consensus 159 q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewg---VDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~ 235 (385)
T KOG2862|consen 159 QDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWG---VDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVS 235 (385)
T ss_pred chHHHHHHHHhhcCCeEEEEechhhcCCccceehhhc---ccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceE
Confidence 99 6778899999999999999999999999888888 99999999999999999 9988877542221 11111
Q ss_pred hhhhHHHhhccccC---CCC-CCCCcHHHHHHHHHHHHHHhccc---ccchhhcccccchHHHHhhhccccccccccCCc
Q 018401 281 VFYDYEEKINQAVF---PGL-QGGPHNHTITGLAVALKQVCTLI---TFSHIHVFSLHVYPAFVSNQNNSENIEEDKGRP 353 (356)
Q Consensus 281 ~~~~~~~~~~~~~~---~~~-~gt~~~~~~~al~~Al~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (356)
.++++.+..+...- +.. +-|+++..+.+|.+||+.+.++. .|.+-|+.+..++.++..+....--..|..-.|
T Consensus 236 ~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlp 315 (385)
T KOG2862|consen 236 FYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLP 315 (385)
T ss_pred EEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccC
Confidence 22233333322211 222 38999999999999999999863 234455545555555554443333344444455
Q ss_pred cc
Q 018401 354 CV 355 (356)
Q Consensus 354 ~~ 355 (356)
||
T Consensus 316 tv 317 (385)
T KOG2862|consen 316 TV 317 (385)
T ss_pred cc
Confidence 54
No 51
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.88 E-value=8.8e-23 Score=188.21 Aligned_cols=200 Identities=21% Similarity=0.182 Sum_probs=145.4
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
+++++.+++++|++.. +++++|+++++.+++.++++|||+|+++.+.|.++.. .+...|+.++.++.+.+.
T Consensus 62 ~~~~~~~A~~~ga~~~-~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~--------~~~~~g~~~~~v~~~~~~ 132 (294)
T cd00615 62 KEAQELAARAFGAKHT-FFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVIN--------GLVLSGAVPVYLKPERNP 132 (294)
T ss_pred HHHHHHHHHHhCCCCE-EEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHH--------HHHHCCCEEEEecCccCc
Confidence 4566899999998643 2338888899998999999999999999988877654 333556666656433331
Q ss_pred C---CCCCCHHHHHHHhhh-cCCcEEEEc-CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhc-----ccCCCCCCCC
Q 018401 175 S---TGYIDYDQLEKSATL-FRPKLIVAG-ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLV-----AAGVIPSPFE 244 (356)
Q Consensus 175 ~---~~~~d~~~l~~~i~~-~~~k~v~l~-~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~-----~~~~~~~~l~ 244 (356)
+ .+.+|++++++++++ .++++|+++ ++.+|.+.|+++|+++|+++|+++++|+||+.+.. +......
T Consensus 133 ~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~--- 209 (294)
T cd00615 133 YYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA--- 209 (294)
T ss_pred ccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc---
Confidence 1 136899999999974 368888888 53389999999999999999999999999986432 1111112
Q ss_pred CccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 245 YADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 245 ~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++|++++|+||+++|+++ |++.++++.. + ..++.........++|+++.++++..|++++.+
T Consensus 210 ~~div~~S~hK~l~g~~~~~~l~~~~~~~-----------~-~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~ 272 (294)
T cd00615 210 GADIVVQSTHKTLPALTQGSMIHVKGDLV-----------N-PDRVNEALNLHQSTSPSYLILASLDVARAMMAL 272 (294)
T ss_pred CCcEEEEchhcccchHhHHHHHHhCCCcC-----------C-HHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHH
Confidence 599999999999999876 7777766310 1 112222111123479999999999999999854
No 52
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.88 E-value=1.1e-21 Score=186.86 Aligned_cols=205 Identities=17% Similarity=0.196 Sum_probs=145.5
Q ss_pred cCCeeecCC--CCCcHHHHHHHHhhhhccCCCCCCCCccCCCch--hHHHHHHHHHHHHHHHcCCCCCccccCCCchHHH
Q 018401 47 KGLELIPSE--NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNE--YIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 47 ~~i~L~~~~--~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~ 122 (356)
..|||++-. +.+...+.+++.++.. ++.+++...|+. ........+++.+++++|+++. .+++|+++++
T Consensus 7 ~~~~~~~~~~~g~~~~~~~~a~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~~--~i~~g~~~a~ 79 (370)
T TIGR02539 7 GSINLNPLQRGGVLTEAARKALVEFGD-----GYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDEA--RVTHGAREGK 79 (370)
T ss_pred cccccChhhhCCCCcHHHHHHHHHHhh-----ccccccccccccccccchHHHHHHHHHHHHhCCCce--EEECChHHHH
Confidence 457775333 2456677777766533 333333322221 1112223456789999999864 4588999999
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh------cCCcEE
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL------FRPKLI 196 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~------~~~k~v 196 (356)
..++.+++++||.|+++.++|.+.+. .+...|++++.++..-+ .++.+|+++|++++++ .++++|
T Consensus 80 ~~~~~~l~~~gd~Vl~~~~~h~s~~~--------~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~lv 150 (370)
T TIGR02539 80 FAVMHALCKEGDWVVLDGLAHYTSYV--------AAERAGLNVKEVPHTGH-PEYKVDPEGYGEVIEEVEDESGKPPVLA 150 (370)
T ss_pred HHHHHHhhCCCCEEEECCcccHHHHH--------HHHHcCCEEEEEecCCc-ccCCcCHHHHHHHHHHhhhccCCCcEEE
Confidence 98999999999999998888765532 34566777766643211 3467899999999863 257888
Q ss_pred EEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 197 VAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 197 ~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
+++ ++| +|...|+++|.++|+++|+++++|++|+.|..+.+..... +|+++.|+||+++++.+ |+++.+++
T Consensus 151 ~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~---~di~v~s~sK~~~~~g~~G~l~~~~~ 224 (370)
T TIGR02539 151 LLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIG---ADFIVGSGHKSMAASGPCGVLGMSEE 224 (370)
T ss_pred EEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcC---CCEEEeeCcccccCCCCEEEEEECHH
Confidence 887 666 8999999999999999999999999999886554433333 89999999999875444 99988873
No 53
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.88 E-value=1.1e-21 Score=185.59 Aligned_cols=269 Identities=10% Similarity=0.038 Sum_probs=174.7
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCC-CchhHHHHHHHHHHHHHHHcCCC-CCcccc-CCCchHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYG-GNEYIDMAESLCQKRALEAFRLD-PEKWGG-SLSGSPSNFQ 124 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~la~~~g~~-~~~v~v-~~sgs~a~~~ 124 (356)
.+.+++++..+|+.|++++.+.+.+.. +...+....+ ......++.+.+++.+++++|++ ..++++ ++||+.++.+
T Consensus 4 ~~l~~pGP~~~p~~V~~a~~~~~~~~~-~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea 82 (360)
T PRK05355 4 VYNFSAGPAMLPEEVLEQAQQELLDWN-GSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAM 82 (360)
T ss_pred eeeccCCCCCCCHHHHHHHHHHhhccc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHH
Confidence 356788999999999999999875411 0001110000 11223467778999999999983 345666 7999999999
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHH-HhhhcCCcEEEEc--CC
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK-SATLFRPKLIVAG--AS 201 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~-~i~~~~~k~v~l~--~~ 201 (356)
++..++.+||++++......++ .+ ...++..|.. ..+ ..+...+..+..++++ .+++ ++++|.++ .+
T Consensus 83 ~~~nl~~~g~~~l~i~~G~fg~---r~---~~~a~~~g~~-~~~--~~~~~~g~~~~~~~~~~~l~~-~~~~V~~th~eT 152 (360)
T PRK05355 83 VPMNLLGGGKKADYVDTGSWSK---KA---IKEAKKYGEV-NVA--ASSEDDGFTYIPPLDEWQLSD-DAAYVHYTSNET 152 (360)
T ss_pred HHHhcCCCCCeEEEEECCHHHH---HH---HHHHHHhCCc-eEE--ecccccCCCCCCChhhccCCC-CCCEEEEccCCC
Confidence 9999999999988765211111 11 1123334532 333 2221134445545555 6766 78999887 44
Q ss_pred CCCCcc-cHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCc
Q 018401 202 AYARLY-DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGK 279 (356)
Q Consensus 202 n~g~~~-~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~ 279 (356)
+||... |+++| +|+++++|++|++|..++++.. .|++++|+||++ ||+| |+++++++.........
T Consensus 153 stGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~-----~d~~~~ssqK~l-gP~Glg~l~~s~~~l~~~~~~~ 220 (360)
T PRK05355 153 IDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSK-----FGLIYAGAQKNI-GPAGLTIVIVREDLLGRALPSI 220 (360)
T ss_pred cceEecCccccc------CCCcEEEEcCccccCccCCHHH-----ccEEEEeccccc-cCCceEEEEECHHHHhhcccCC
Confidence 489887 67666 8999999999999999988765 469999999987 6999 99999997532211101
Q ss_pred chhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhhcc
Q 018401 280 EVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN 342 (356)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (356)
....++...... ....||||+..+.||.+||+++.++.+++++.++...+...+..+...
T Consensus 221 ~~~~~~~~~~~~---~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~ 280 (360)
T PRK05355 221 PSMLDYKTHADN---DSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDS 280 (360)
T ss_pred ChHHHHHHHHhc---CCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh
Confidence 111133322221 123489999999999999999987536666665544444444433333
No 54
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.87 E-value=1.1e-20 Score=180.09 Aligned_cols=229 Identities=14% Similarity=0.114 Sum_probs=155.0
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc------C
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------K 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------~ 131 (356)
+.+.+.+++..++.... +.++ .|. ....+.+.+++++++++|++++++++++|+++++..++.++. +
T Consensus 32 ~~~~~~~a~~~~~~~~~--~~~~--~~~---~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 104 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNL--GDPG--LFP---GTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEK 104 (373)
T ss_pred chHHHHHHHHHHhhcCC--CCcc--cCc---cHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccC
Confidence 44556777777655422 3332 122 234566788999999999987776777788888876666553 4
Q ss_pred CCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCc-EEEEcCCC-CCCcccH
Q 018401 132 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK-LIVAGASA-YARLYDY 209 (356)
Q Consensus 132 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k-~v~l~~~n-~g~~~~l 209 (356)
+||+|++++++|.++.. .++..|++++.++ .+ +++.+|++++++++.+ ++. +++++++| +|.+.|+
T Consensus 105 ~g~~vl~~~~~h~~~~~--------~~~~~G~~~~~v~--~~-~~~~~d~~~l~~~l~~-~~~~vv~~~~~~~tG~~~~~ 172 (373)
T TIGR03812 105 RTPNIIVPESAHFSFEK--------AAEMLGLELRYAP--LD-EDYTVDVKDVEDLIDD-NTIGIVGIAGTTELGQIDDI 172 (373)
T ss_pred CCcEEEECCcchHHHHH--------HHHHcCCeEEEEe--eC-CCCCcCHHHHHHHHhh-CcEEEEEECCCCCCCccCCH
Confidence 77999999987765322 3445677776664 44 4578899999999987 664 45555555 8999999
Q ss_pred HHHHHHHHHcCCEEEEeccchhhhcccC---CC----CCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcch
Q 018401 210 ERIRKVCNKQKAIMLADMAHISGLVAAG---VI----PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEV 281 (356)
Q Consensus 210 ~~I~~la~~~g~~vivD~a~~~g~~~~~---~~----~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~ 281 (356)
++|.++|+++|+++|+|+||+.+.++.. .. .....++|++++++|||+.+|.+ |++++.++
T Consensus 173 ~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~----------- 241 (373)
T TIGR03812 173 EELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSK----------- 241 (373)
T ss_pred HHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCH-----------
Confidence 9999999999999999999986654321 11 11112589999999998766654 55554432
Q ss_pred hhhHHHhhcc--ccC-CC----CCCCCcHHHHHHHHHHHHHHhc
Q 018401 282 FYDYEEKINQ--AVF-PG----LQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 282 ~~~~~~~~~~--~~~-~~----~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++.+.+.. .+. .. ..||++...++++.++++++.+
T Consensus 242 --~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~ 283 (373)
T TIGR03812 242 --SYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGR 283 (373)
T ss_pred --HHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCH
Confidence 33333211 010 11 1278888889999999998754
No 55
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.87 E-value=5.9e-21 Score=185.45 Aligned_cols=257 Identities=16% Similarity=0.182 Sum_probs=170.8
Q ss_pred cccChHHHHHHHHHHHH----HHcCCeeecCCC---CCcH----HHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHH
Q 018401 28 EVVDPEIADIIEHEKAR----QWKGLELIPSEN---FTSV----SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (356)
Q Consensus 28 ~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~---~~~~----~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (356)
+.+.+.....+.+..+. ..+.++|..++. ..++ .+.+++.+++.... ..|++..+..+++
T Consensus 14 ~~v~~~~~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~-------~~Y~~~~g~~~Lr-- 84 (460)
T PRK13238 14 KMVEPIRLTTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGD-------EAYAGSRSYYRLE-- 84 (460)
T ss_pred ceeccccccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCC-------cccCCCCCHHHHH--
Confidence 34555444444433222 235778877775 3332 47777777775421 3455556677776
Q ss_pred HHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC---
Q 018401 97 CQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN--- 173 (356)
Q Consensus 97 ~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--- 173 (356)
+.++++++.+ ++++|.||++++..+++++++||| |+++++ .|..+...+.+.|++++.++++..
T Consensus 85 --eaia~~~~~~--~vv~t~ggt~A~~~~~~all~pGD-Vii~~p--------~~~~~~~~i~~~G~~~v~v~~~~~~~~ 151 (460)
T PRK13238 85 --DAVKDIFGYP--YTIPTHQGRAAEQILFPVLIKKGD-VVPSNY--------HFDTTRAHIELNGATAVDLVIDEALDT 151 (460)
T ss_pred --HHHHHHhCCC--cEEECCCHHHHHHHHHHHhCCCCC-EEccCC--------cccchHHHHHHcCCEEEEEeccccccc
Confidence 6677777765 456699999999989999999999 887774 333333345677877766654310
Q ss_pred --CCC--CCCCHHHHHHHhhh---cCCcEEEEc-CCC-CC-Cccc---HHHHHHHHHHcCCEEEEeccchhhhc-cc---
Q 018401 174 --EST--GYIDYDQLEKSATL---FRPKLIVAG-ASA-YA-RLYD---YERIRKVCNKQKAIMLADMAHISGLV-AA--- 236 (356)
Q Consensus 174 --~~~--~~~d~~~l~~~i~~---~~~k~v~l~-~~n-~g-~~~~---l~~I~~la~~~g~~vivD~a~~~g~~-~~--- 236 (356)
.+. +.+|+++|++++++ .++++|+++ ++| +| .+.+ +++|.++|++||++||+|+||..+.. ..
T Consensus 152 ~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~ 231 (460)
T PRK13238 152 GSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQR 231 (460)
T ss_pred cccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhc
Confidence 012 34999999999984 268999998 777 65 5554 67899999999999999999965421 11
Q ss_pred --CCCCCC--------CCCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHhhccccC--CC--CCCCCc
Q 018401 237 --GVIPSP--------FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVF--PG--LQGGPH 302 (356)
Q Consensus 237 --~~~~~~--------l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~--~~gt~~ 302 (356)
+..... ....|++++|++|.+.+|.||+++++++ ++.+.++.... .+ .+|.++
T Consensus 232 e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~-------------~l~~~~~~~~~~~~g~~t~~g~~ 298 (460)
T PRK13238 232 EPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIGGLLCFRDE-------------DLFTECRTLCILYEGFPTYGGLA 298 (460)
T ss_pred cccccCCCHHHHhhhhcccCcEEEEecccCCCCcceeEEEcChH-------------HHHHHhhhcccccCCcccccCcH
Confidence 011111 1248999999999989999999999863 56666654432 12 236666
Q ss_pred HHHHHHHHHHHHHHhcc
Q 018401 303 NHTITGLAVALKQVCTL 319 (356)
Q Consensus 303 ~~~~~al~~Al~~~~~~ 319 (356)
.....|++.+++...++
T Consensus 299 ~~~~~Ala~~l~e~~~~ 315 (460)
T PRK13238 299 GRDMEALAVGLYEGMDE 315 (460)
T ss_pred HHHHHHHHhhHHHhhCh
Confidence 67788888888776553
No 56
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.87 E-value=4.4e-21 Score=184.40 Aligned_cols=198 Identities=8% Similarity=0.009 Sum_probs=148.7
Q ss_pred CCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-C-Ccccc--CCCchHHHHHHHHhhc
Q 018401 55 ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-P-EKWGG--SLSGSPSNFQVYTALL 130 (356)
Q Consensus 55 ~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~-~~v~v--~~sgs~a~~~~l~al~ 130 (356)
..++.|.+.+.+...+...+ +++.+ .+. ..++++.+++++++++|++ + +++.+ |+|||++|..++.+..
T Consensus 50 tt~~~p~~~~~~~~~l~~~~--~np~s---~~~--~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar 122 (431)
T TIGR01788 50 TTWMEPEARKLMDETINKNM--IDKDE---YPQ--TAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMK 122 (431)
T ss_pred CCCCCHHHHHHHHHHHhcCC--CCccc---Ccc--HHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHH
Confidence 45678889999988886533 44433 222 2388899999999999997 4 45655 7999999887775542
Q ss_pred --------CC-----CCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 018401 131 --------KP-----HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 197 (356)
Q Consensus 131 --------~~-----gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~ 197 (356)
.. +..|++++.+|.++... +...|.+++.+ +++++++.+|+++|++++.+ +|.+|+
T Consensus 123 ~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka--------~~~lg~~v~~i--~~d~~~~~vd~~~L~~~i~~-~t~lV~ 191 (431)
T TIGR01788 123 WRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKF--------ARYFDVELREV--PMDPGRYVIDPEQVVEAVDE-NTIGVV 191 (431)
T ss_pred HHHHHHHHhcCCCCCCcEEEEcCcchHHHHHH--------HHHcCceeEEE--ecCCCceeeCHHHHHHHHhh-CCeEEE
Confidence 11 23688899999877542 23345556556 55533358999999999987 788888
Q ss_pred Ec-CCC-CCCcccHHHHHHHHHHc------CCEEEEeccchhhhcccCCCCCC----CCCccEEEeCCCCcCCCCCc-eE
Q 018401 198 AG-ASA-YARLYDYERIRKVCNKQ------KAIMLADMAHISGLVAAGVIPSP----FEYADVVTTTTHKSLRGPRG-AM 264 (356)
Q Consensus 198 l~-~~n-~g~~~~l~~I~~la~~~------g~~vivD~a~~~g~~~~~~~~~~----l~~~D~~~~s~~K~l~gp~g-G~ 264 (356)
++ .+| +|.+.|+++|+++|+++ |+++++|+||+.+..+......+ ..++|.+++|+|||++||.| |+
T Consensus 192 ~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~ 271 (431)
T TIGR01788 192 CILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVGW 271 (431)
T ss_pred EEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcEE
Confidence 87 555 89999999999999999 99999999999666544332221 23699999999999889999 99
Q ss_pred EEEecC
Q 018401 265 IFFRKG 270 (356)
Q Consensus 265 l~~~~~ 270 (356)
++++++
T Consensus 272 l~~r~~ 277 (431)
T TIGR01788 272 VIWRDE 277 (431)
T ss_pred EEEeCh
Confidence 999874
No 57
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.86 E-value=1.8e-20 Score=180.12 Aligned_cols=173 Identities=13% Similarity=0.085 Sum_probs=127.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCccccCC-CchHHHHHHHHhhcCC--CCeeeecCCCCCcccCccccccccccccccee
Q 018401 88 EYIDMAESLCQKRALEAFRLDPEKWGGSL-SGSPSNFQVYTALLKP--HDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 164 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~v~v~~-sgs~a~~~~l~al~~~--gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 164 (356)
.+..++++++++++++++|++.+++.++. ++++++.+++.+++.+ ||+|+++++.|+++...+..... ..|.+
T Consensus 60 ~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~----~~g~~ 135 (398)
T cd00613 60 QGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGE----PLGIE 135 (398)
T ss_pred hhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcc----cCCcE
Confidence 45668888999999999999876666755 4445655555566666 99999999999888654432111 11355
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCCcccH-HHHHHHHHHcCCEEEEeccchhhhcccCCCCCC
Q 018401 165 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYARLYDY-ERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 242 (356)
Q Consensus 165 ~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n~g~~~~l-~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~ 242 (356)
++.+ +.+ +++.+|++++++++.+ ++++|+++ ++.+|.+.|+ ++|+++|+++|+++|+|++|+.+..+.+....+
T Consensus 136 ~~~v--~~~-~~~~~d~~~l~~~i~~-~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~ 211 (398)
T cd00613 136 VVEV--PSD-EGGTVDLEALKEEVSE-EVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYG 211 (398)
T ss_pred EEEe--ccC-CCCCcCHHHHHHhcCC-CeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcC
Confidence 5555 444 3457899999999987 89999888 4447888885 999999999999999999997766544433334
Q ss_pred CCCccEEEeCCCCcCC-----CCCceEEEEecCc
Q 018401 243 FEYADVVTTTTHKSLR-----GPRGAMIFFRKGV 271 (356)
Q Consensus 243 l~~~D~~~~s~~K~l~-----gp~gG~l~~~~~~ 271 (356)
+|++++|+|||+. ||.+|++++++++
T Consensus 212 ---~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~ 242 (398)
T cd00613 212 ---ADIVVGNLQKTGVPHGGGGPGAGFFAVKKEL 242 (398)
T ss_pred ---CCEEEeeccccCCCCCCCCCceeEEEEhhhh
Confidence 8999999999981 2344889888754
No 58
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.86 E-value=1.5e-20 Score=174.99 Aligned_cols=189 Identities=17% Similarity=0.178 Sum_probs=151.8
Q ss_pred CCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCC
Q 018401 55 ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPH 133 (356)
Q Consensus 55 ~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~g 133 (356)
.+....+.++++.+.+.+.+... .....++| +++++++|++.. +.++|||.|+.+++.++ ++||
T Consensus 10 ~p~i~~~e~~~v~~vl~sg~i~~---------G~~v~~FE----~~~ae~~G~k~a--va~~sgT~AL~laL~al~ig~G 74 (374)
T COG0399 10 RPSIGEEELAAVQEVLKSGWLTG---------GPFVRRFE----QAFAEYLGVKYA--VAVSSGTAALHLALLALAIGPG 74 (374)
T ss_pred CCCcchHHHHHHHHHHHcCCeec---------ChHHHHHH----HHHHHHhCCCeE--EEecChHHHHHHHHHhcCCCCC
Confidence 33456788899999888754211 12345555 889999999875 44899999999899877 8999
Q ss_pred CeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHH
Q 018401 134 DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIR 213 (356)
Q Consensus 134 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~ 213 (356)
|+|++++.++.+... .+...|+++ |.++++++++.+|++.+|+++++ +||+|+.. +-.|...++++|.
T Consensus 75 DeVI~ps~TfvATan--------~i~~~Ga~P--VFvDid~~T~nid~~~ie~aIt~-~tKAIipV-hl~G~~~dm~~i~ 142 (374)
T COG0399 75 DEVIVPSFTFVATAN--------AVLLVGAKP--VFVDIDPDTLNIDPDLIEAAITP-RTKAIIPV-HLAGQPCDMDAIM 142 (374)
T ss_pred CEEEecCCchHHHHH--------HHHHcCCeE--EEEecCCcccCCCHHHHHHHccc-CCeEEEEe-hhccCCCCHHHHH
Confidence 999999988776654 455677666 44488878889999999999998 89998763 3379899999999
Q ss_pred HHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCceEEEEecC
Q 018401 214 KVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 270 (356)
Q Consensus 214 ~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~ 270 (356)
++|++||++||.|+||+.|....+.....++.+-+++|.++|.|....||+++++++
T Consensus 143 ~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~ 199 (374)
T COG0399 143 ALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTTGEGGAVVTNDE 199 (374)
T ss_pred HHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCCCccccCceEEEeCCH
Confidence 999999999999999999998876655555567788888899997778899999986
No 59
>PRK07179 hypothetical protein; Provisional
Probab=99.86 E-value=1.8e-20 Score=180.63 Aligned_cols=223 Identities=15% Similarity=0.199 Sum_probs=155.4
Q ss_pred cHHHHHHHHhhhhccCCCCCC-CCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeee
Q 018401 59 SVSVMQAVGSVMTNKYSEGYP-GARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIM 137 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl 137 (356)
.|+|++++.+.+...+ .+.. ++.+..+.....+ +++.+++++|++. +++++||++++..+++++..+||.|+
T Consensus 70 ~p~v~~a~~~~~~~~~-~~~~~s~~~~~~~~~~~~----le~~la~~~g~~~--~~~~~sG~~An~~~l~~l~~~g~~v~ 142 (407)
T PRK07179 70 HPDIIKAQIAALQEEG-DSLVMSAVFLHDDSPKPQ----FEKKLAAFTGFES--CLLCQSGWAANVGLLQTIADPNTPVY 142 (407)
T ss_pred CHHHHHHHHHHHHHhC-CCCCccccccCCchHHHH----HHHHHHHHhCCCc--EEEECCHHHHHHHHHHHhCCCCCEEE
Confidence 6999999999887522 1111 2333333333344 4488999999864 35699999999999999999999999
Q ss_pred ecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHH
Q 018401 138 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKV 215 (356)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~l 215 (356)
+..++|.+... ++...|..+ ++++ ..|+++|++++++.++++|+++ ++| +|.+.|+++|.++
T Consensus 143 ~~~~~h~s~~~--------~~~~~g~~~--~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l 206 (407)
T PRK07179 143 IDFFAHMSLWE--------GVRAAGAQA--HPFR------HNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDI 206 (407)
T ss_pred EECCcCHHHHH--------HHHHCCCeE--EEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHH
Confidence 98888876643 222344333 3222 2489999999876357888887 555 8999999999999
Q ss_pred HHHcCCEEEEeccchhhhcccC----CCCCCCC-CccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHhhc
Q 018401 216 CNKQKAIMLADMAHISGLVAAG----VIPSPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKIN 290 (356)
Q Consensus 216 a~~~g~~vivD~a~~~g~~~~~----~~~~~l~-~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~ 290 (356)
|+++|+++|+|++|+.|..... +...++. .+|++++|+||+++ +++|++++++ ++.+.+.
T Consensus 207 ~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~~~G~l~~~~--------------~~~~~~~ 271 (407)
T PRK07179 207 AEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-GRAGIITCPR--------------ELAEYVP 271 (407)
T ss_pred HHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-ccCeEEEeCH--------------HHHHHHH
Confidence 9999999999999987754211 1112221 47999999999885 4578888876 4444443
Q ss_pred cccCCCCC-CCCcHHHHHHHHHHHHHHhcc
Q 018401 291 QAVFPGLQ-GGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 291 ~~~~~~~~-gt~~~~~~~al~~Al~~~~~~ 319 (356)
....+..+ +|++...++++.++++.+.+.
T Consensus 272 ~~~~~~~~~~t~~~~~~aa~~aal~~~~~~ 301 (407)
T PRK07179 272 FVSYPAIFSSTLLPHEIAGLEATLEVIESA 301 (407)
T ss_pred HhCcCeeeCCCCCHHHHHHHHHHHHHHhcC
Confidence 32223333 677778888888888887553
No 60
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.86 E-value=3.9e-20 Score=176.79 Aligned_cols=225 Identities=14% Similarity=0.095 Sum_probs=158.0
Q ss_pred ccChHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC
Q 018401 29 VVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR 106 (356)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g 106 (356)
...+..+..+........+.++|..++++ +++.+.+++.+.+.+.. ..|+...+..++++++.+++.+++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~la~~~~~~~~ 79 (382)
T PRK06108 7 ALPESGIREVANAGRGREGVLPLWFGESDLPTPDFIRDAAAAALADGE-------TFYTHNLGIPELREALARYVSRLHG 79 (382)
T ss_pred hCCchHHHHHHHHHhccCCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 34445555555543333467899888774 57889999988776521 1233335567888889999998888
Q ss_pred --CCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHH
Q 018401 107 --LDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQL 184 (356)
Q Consensus 107 --~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l 184 (356)
++++++++++|+++++..++.+++++||.|++++++|..+.. .+...|++++.++++.+..++.+|++++
T Consensus 80 ~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~d~~~l 151 (382)
T PRK06108 80 VATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVA--------APKILGARVVCVPLDFGGGGWTLDLDRL 151 (382)
T ss_pred CCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHCCCEEEEeeCCCCCCCccCCHHHH
Confidence 678888889999999988889999999999999976654432 3445676666665432223457899999
Q ss_pred HHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcc-cCCCC--CCC---CCccEEEeCC
Q 018401 185 EKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA-AGVIP--SPF---EYADVVTTTT 253 (356)
Q Consensus 185 ~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~-~~~~~--~~l---~~~D~~~~s~ 253 (356)
++.+.+ ++++|+++ ++| +|.+.+ +++|.++|+++|+++|+|++++..... ..... ..+ ....+++.|+
T Consensus 152 ~~~~~~-~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 230 (382)
T PRK06108 152 LAAITP-RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSF 230 (382)
T ss_pred HHhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeec
Confidence 998876 78998887 777 886664 678889999999999999998654332 11100 011 1245889999
Q ss_pred CCcCCCC--CceEEEEec
Q 018401 254 HKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp--~gG~l~~~~ 269 (356)
+|.++.| +-|+++.++
T Consensus 231 SK~~g~~G~RiG~~~~~~ 248 (382)
T PRK06108 231 SKNWAMTGWRLGWLVAPP 248 (382)
T ss_pred hhhccCcccceeeeeCCH
Confidence 9977433 239999876
No 61
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.85 E-value=1.8e-20 Score=176.77 Aligned_cols=223 Identities=18% Similarity=0.147 Sum_probs=153.0
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeee
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMA 138 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~ 138 (356)
+|+|++++.+++.+ +..+..+.+.+.+ .....+++++.+++++|++. .+++++|++++..++++++++||+|++
T Consensus 17 ~~~v~~a~~~~~~~-~~~~~~~~~~~~~---~~~~~~~l~~~la~~~~~~~--~iv~~sg~~a~~~~~~~~~~~gd~Vl~ 90 (349)
T cd06454 17 HPEVIEAAKEALDK-YGVGAGGSRLISG---TSDLHEELEEELAEFHGKEA--ALVFSSGYAANDGVLSTLAGKGDLIIS 90 (349)
T ss_pred CHHHHHHHHHHHHH-hCCCCCCcCeecC---CchHHHHHHHHHHHHhCCCC--EEEeccHHHHHHHHHHHhcCCCCEEEE
Confidence 69999999999975 4322222222212 23455567789999999863 355777788888788888999999999
Q ss_pred cCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh----cCCcEEEEc-CCC-CCCcccHHHH
Q 018401 139 LDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL----FRPKLIVAG-ASA-YARLYDYERI 212 (356)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~----~~~k~v~l~-~~n-~g~~~~l~~I 212 (356)
++++|.++.. .+...|..++.+ + .+|.+++++++.+ .++++++++ ++| +|...|+++|
T Consensus 91 ~~~~~~~~~~--------~~~~~g~~~~~~--~------~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i 154 (349)
T cd06454 91 DSLNHASIID--------GIRLSGAKKRIF--K------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPEL 154 (349)
T ss_pred ehhhhHHHHH--------HHHHcCCceEEe--c------CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHH
Confidence 9987766543 223345555433 2 2477888888764 246777776 555 8999999999
Q ss_pred HHHHHHcCCEEEEeccchhhhcccCC-----CCCCCCCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHH
Q 018401 213 RKVCNKQKAIMLADMAHISGLVAAGV-----IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEE 287 (356)
Q Consensus 213 ~~la~~~g~~vivD~a~~~g~~~~~~-----~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~ 287 (356)
+++|+++|+++|+|++|+.|..+... ......+.|++++|+||++++ +||+++.++ ++.+
T Consensus 155 ~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~gG~i~~~~--------------~~~~ 219 (349)
T cd06454 155 VDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VGGYIAGSK--------------ELID 219 (349)
T ss_pred HHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-cCCEEECCH--------------HHHH
Confidence 99999999999999999877653211 001112489999999998754 678877766 3444
Q ss_pred hhccccCCCCC-CCCcHHHHHHHHHHHHHHhc
Q 018401 288 KINQAVFPGLQ-GGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 288 ~~~~~~~~~~~-gt~~~~~~~al~~Al~~~~~ 318 (356)
.+.....+... ++.+...++++.++++++.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 251 (349)
T cd06454 220 YLRSYARGFIFSTSLPPAVAAAALAALEVLQG 251 (349)
T ss_pred HHHHhchhhhccCCCCHHHHHHHHHHHHHHhc
Confidence 43332222222 46777788888899988865
No 62
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.85 E-value=6e-20 Score=172.18 Aligned_cols=233 Identities=20% Similarity=0.202 Sum_probs=174.1
Q ss_pred CCeeecCCCCC----cHHHHHHHHhhhhccCCCCCCCCccCCCc-hhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHH
Q 018401 48 GLELIPSENFT----SVSVMQAVGSVMTNKYSEGYPGARYYGGN-EYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 48 ~i~L~~~~~~~----~~~V~~a~~~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~ 122 (356)
.+|+. +.+++ +|.+++++.+.+.. |..|..++|...|+ ....+|| +.+|+++|.+.. ++.+||..+|
T Consensus 41 ~~nf~-SNdYLGLa~~~~~~~a~~~~~~~-~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~a--l~f~SGy~AN 112 (388)
T COG0156 41 VLNFC-SNDYLGLASHPELIEAAKAAIRR-YGVGAGGSRLISGTSDLHVELE----EELADFLGAEAA--LLFSSGFVAN 112 (388)
T ss_pred eEeee-ccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCcE--EEEcccchhH
Confidence 46664 44453 78999999999987 44466666654444 3355555 899999999865 5588999999
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc--C---CcEEE
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--R---PKLIV 197 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~--~---~k~v~ 197 (356)
..++.++++++|.|+.....|.+.+. ++.+.+++.... .. .|+++|++.+.+. . .++|+
T Consensus 113 ~~~i~~l~~~~dli~~D~lnHASiid--------G~rls~a~~~~f--~H------nD~~~Le~~l~~~~~~~~~~~~Iv 176 (388)
T COG0156 113 LGLLSALLKKGDLIFSDELNHASIID--------GIRLSRAEVRRF--KH------NDLDHLEALLEEARENGARRKLIV 176 (388)
T ss_pred HHHHHHhcCCCcEEEEechhhhhHHH--------HHHhCCCcEEEe--cC------CCHHHHHHHHHhhhccCCCceEEE
Confidence 99999999999999999999988765 666777666433 33 4889999998762 1 35555
Q ss_pred Ec--CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccC---C-CCCCCC--CccEEEeCCCCcCCCCCceEEEEec
Q 018401 198 AG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG---V-IPSPFE--YADVVTTTTHKSLRGPRGAMIFFRK 269 (356)
Q Consensus 198 l~--~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~---~-~~~~l~--~~D~~~~s~~K~l~gp~gG~l~~~~ 269 (356)
+. .|+.|.+.|+++|++++++|++++++|+||+.|.+... + ...++. .+|+++++..|+|+ -.||++..+.
T Consensus 177 tegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG-s~Gg~v~g~~ 255 (388)
T COG0156 177 TEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG-SSGGYIAGSA 255 (388)
T ss_pred EeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc-ccCceeeCcH
Confidence 54 78899999999999999999999999999999987532 1 122222 36899999999985 5678888877
Q ss_pred CcchhccCCcchhhhHHHhhccccCCCCCCC-CcHHHHHHHHHHHHHHhcc
Q 018401 270 GVKEINKQGKEVFYDYEEKINQAVFPGLQGG-PHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt-~~~~~~~al~~Al~~~~~~ 319 (356)
.+.+++.....+..++| .+....++..++++.+.+.
T Consensus 256 --------------~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~ 292 (388)
T COG0156 256 --------------ALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEG 292 (388)
T ss_pred --------------HHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhC
Confidence 56777666556666644 4455556778889988753
No 63
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.84 E-value=7e-20 Score=175.68 Aligned_cols=225 Identities=12% Similarity=0.099 Sum_probs=156.3
Q ss_pred ccccChHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHH
Q 018401 27 LEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (356)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~ 104 (356)
+..+....+..+.+......+.|+|..+++. +++.+++++.+.+.... ..|....+...+++++++++.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~ 86 (391)
T PRK08361 14 INLIQRSKIRELFERASKMENVISLGIGEPDFDTPKNIKEAAKRALDEGW-------THYTPNAGIPELREAIAEYYKKF 86 (391)
T ss_pred HHhCCccHHHHHHHHHHhhcCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHHHHHHHH
Confidence 3344444555554443333457899877764 46788888887765421 12333345678888888888777
Q ss_pred cC--CCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC-CCCCCH
Q 018401 105 FR--LDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TGYIDY 181 (356)
Q Consensus 105 ~g--~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~ 181 (356)
+| ++++++++++|+++++..++.+++++||.|++++++|.++.. .+...|.++..+ +++.+ ++.+|+
T Consensus 87 ~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~--------~~~~~g~~~~~v--~~~~~~~~~~d~ 156 (391)
T PRK08361 87 YGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVE--------DAKIAEAKPIRI--PLREENEFQPDP 156 (391)
T ss_pred hCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHHcCCEEEEE--ecCCccCCCCCH
Confidence 66 467788889999999988889999999999999977755432 344556666555 44433 457999
Q ss_pred HHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC-CCC-CCCC-CccEEEeCC
Q 018401 182 DQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-VIP-SPFE-YADVVTTTT 253 (356)
Q Consensus 182 ~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~-~~~-~~l~-~~D~~~~s~ 253 (356)
+++++.+.+ ++++++++ |+| +|...+ +++|.++|+++++++|+|++++....... ... ..+. ..++++.|+
T Consensus 157 ~~l~~~i~~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~ 235 (391)
T PRK08361 157 DELLELITK-RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSF 235 (391)
T ss_pred HHHHHhccc-ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecC
Confidence 999999987 78998887 878 898888 77888999999999999999753322111 000 0111 257899999
Q ss_pred CCcCCCCC--ceEEEEec
Q 018401 254 HKSLRGPR--GAMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp~--gG~l~~~~ 269 (356)
+|.++.|. .|++++++
T Consensus 236 SK~~~~~GlRiG~~~~~~ 253 (391)
T PRK08361 236 SKTFAMTGWRLGFVIAPE 253 (391)
T ss_pred chhcCCcHhhhhhhccCH
Confidence 99774442 38988876
No 64
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.84 E-value=3.9e-20 Score=174.11 Aligned_cols=253 Identities=11% Similarity=0.034 Sum_probs=163.8
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCc-cCCCc--hhHHHHHHHHHHHHHHHcCCC-CCcccc-CCCchHHHHHHHHhhcC
Q 018401 57 FTSVSVMQAVGSVMTNKYSEGYPGAR-YYGGN--EYIDMAESLCQKRALEAFRLD-PEKWGG-SLSGSPSNFQVYTALLK 131 (356)
Q Consensus 57 ~~~~~V~~a~~~~l~~~~~~~~~~~~-~~~~~--~~~~~l~~~~~~~la~~~g~~-~~~v~v-~~sgs~a~~~~l~al~~ 131 (356)
..|.+|++++.+++.+ +. +.+.- +..++ ....++.+.+++.++++++++ ..++++ ++|||+++.+++..++.
T Consensus 2 ~~p~~v~~~~~~~~~~-~~--~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~ 78 (349)
T TIGR01364 2 ALPEEVLEQAQKELLN-FN--GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLA 78 (349)
T ss_pred CCCHHHHHHHHHHHhC-cc--CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC
Confidence 3688999999999875 21 11111 11111 223466678999999999984 345666 67799999999999999
Q ss_pred CCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEEc--CCCCCCccc
Q 018401 132 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG--ASAYARLYD 208 (356)
Q Consensus 132 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~l~--~~n~g~~~~ 208 (356)
+||++++......+. .+ ...++..|. +..+..+... ....+|+++++ +++ ++++|.++ .++||...+
T Consensus 79 ~~~~~l~i~~G~fg~---r~---~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~v~~th~ETstGv~~~ 148 (349)
T TIGR01364 79 EGKVADYIVTGAWSK---KA---AKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISE-DAAYVHYCANETIHGVEFR 148 (349)
T ss_pred CCCeEEEEECCHHHH---HH---HHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCC-CCCEEEEcCCCCcccEecc
Confidence 999988776222111 11 123344555 4444322111 22356777655 334 78998887 444887765
Q ss_pred HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHH
Q 018401 209 YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEE 287 (356)
Q Consensus 209 l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~ 287 (356)
++++.+++++++|++|++|..++++.. .|++++|+||+| ||+| |+++++++.............++..
T Consensus 149 -----~l~~~~~~l~iVDavss~g~~~id~~~-----~d~~~~ssqK~l-gP~Glg~l~~s~~~~~~~~~~~~~~~~~~~ 217 (349)
T TIGR01364 149 -----ELPDVKNAPLVADMSSNILSRPIDVSK-----FGLIYAGAQKNI-GPAGLTVVIVRKDLLGRASRITPSMLNYKI 217 (349)
T ss_pred -----eecccCCCeEEEEccccccCccCCHHH-----ccEEEEeccccc-CCCceEEEEECHHHHhhcccCCCCcchHHH
Confidence 667778999999999999999988765 569999999987 6999 9999998653221111111111111
Q ss_pred hhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHH
Q 018401 288 KINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAF 336 (356)
Q Consensus 288 ~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~ 336 (356)
.... ....||||++.+.+|.+||+++.++.+++++.++...+...+
T Consensus 218 ~~~~---~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l 263 (349)
T TIGR01364 218 HAEN---DSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLL 263 (349)
T ss_pred HHhc---CCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 1111 123489999999999999999987546776655544443333
No 65
>PLN00175 aminotransferase family protein; Provisional
Probab=99.84 E-value=2.1e-19 Score=173.38 Aligned_cols=227 Identities=13% Similarity=0.082 Sum_probs=162.4
Q ss_pred cccccccChHHHHHHHHHHHHHHcCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHH
Q 018401 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (356)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 101 (356)
.+++..++++.+..+.+.. ...+.|+|..+.+ ++++.+++++.+.+.+.. ..|+...+..++++++.+++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~Lr~aia~~~ 104 (413)
T PLN00175 33 AKRLEKFKTTIFTQMSSLA-IKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGK-------NQYARGFGVPELNSAIAERF 104 (413)
T ss_pred hHHhhcCCCCHHHHHHHHh-hcCCeEecCCCCCCCCCCHHHHHHHHHHHhcCC-------CCcCCCCCCHHHHHHHHHHH
Confidence 4556677788887777653 3346788886665 357888999888876421 22344456778998898999
Q ss_pred HHHcCC--CCC-ccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCC
Q 018401 102 LEAFRL--DPE-KWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 178 (356)
Q Consensus 102 a~~~g~--~~~-~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 178 (356)
.+.+|. +++ ++++|+|+++++..++.++++|||+|+++++.|..+ ...+...|.+++.+ +++.+++.
T Consensus 105 ~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~--------~~~~~~~g~~~~~v--~~~~~~~~ 174 (413)
T PLN00175 105 KKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY--------EATLSMAGAKIKTV--TLRPPDFA 174 (413)
T ss_pred HHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhH--------HHHHHHcCCEEEEE--ECCcccCC
Confidence 888885 565 577799999999888899999999999999655443 33455667767555 45434578
Q ss_pred CCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC---CCCC-CCCCccEE
Q 018401 179 IDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG---VIPS-PFEYADVV 249 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~---~~~~-~l~~~D~~ 249 (356)
+|+++|++++.+ ++|+|+++ ++| +|.+.+ +++|+++|++|++++|+|+++........ +... +.....++
T Consensus 175 ~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~ 253 (413)
T PLN00175 175 VPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVT 253 (413)
T ss_pred CCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEE
Confidence 999999999887 89999987 778 897764 67788999999999999999754322111 1111 11124588
Q ss_pred EeCCCCcCCCC--CceEEEEec
Q 018401 250 TTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 250 ~~s~~K~l~gp--~gG~l~~~~ 269 (356)
+.|.+|.++.| +-|+++.++
T Consensus 254 i~SfSK~~~~~G~RiG~~v~~~ 275 (413)
T PLN00175 254 MNSLGKTFSLTGWKIGWAIAPP 275 (413)
T ss_pred EecchhhccCcchheeeeEeCH
Confidence 89999987433 339998876
No 66
>PRK08912 hypothetical protein; Provisional
Probab=99.84 E-value=2.3e-19 Score=171.87 Aligned_cols=230 Identities=12% Similarity=0.089 Sum_probs=161.8
Q ss_pred hhhcccccccChHHHHHHHHHHHHHHcCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHH
Q 018401 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (356)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (356)
|||++++..+.+..+..+.+..+ ....++|..+.+ +.|+.+.+++.+.+.... .+ |+...+..++++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-~~------Y~~~~G~~~lr~~ia 73 (387)
T PRK08912 2 KMGNPVFADLPTTIFEVMSQLAR-EHGAINLGQGFPDDPGPEDVRRAAADALLDGS-NQ------YPPMMGLPELRQAVA 73 (387)
T ss_pred chhhHHHhhCCCCHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCcHHHHHHHH
Confidence 56666777777777776666532 246688876544 346788888877665421 12 333355678888888
Q ss_pred HHHHHHcCC--CCC-ccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 99 KRALEAFRL--DPE-KWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 99 ~~la~~~g~--~~~-~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
+++.+.+|. +++ ++++|+|+++++..++.+++++||+|+++.+.|..+. ..+...|.+++.+ +++.+
T Consensus 74 ~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~--------~~~~~~g~~~~~~--~~~~~ 143 (387)
T PRK08912 74 AHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYL--------PLIRRAGGVPRLV--RLEPP 143 (387)
T ss_pred HHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH--------HHHHHcCCEEEEE--ecCcc
Confidence 888888775 666 7888999999998889999999999999997665443 2445567666555 44434
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc----CCCCC-CCCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPS-PFEY 245 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~-~l~~ 245 (356)
++.+|++++++.+.+ ++++++++ ++| ||.+.+ +++|.++|++|++++|+|+++....... .+... +...
T Consensus 144 ~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 222 (387)
T PRK08912 144 HWRLPRAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRE 222 (387)
T ss_pred cCcCCHHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccC
Confidence 568999999999876 88999887 888 897776 6678899999999999999985322211 01111 1113
Q ss_pred ccEEEeCCCCcCCCC--CceEEEEec
Q 018401 246 ADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 246 ~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
.++++.|.+|.++-| +-|+++.++
T Consensus 223 ~~i~~~S~SK~~g~~GlRiG~~~~~~ 248 (387)
T PRK08912 223 RTVKIGSAGKIFSLTGWKVGFVCAAP 248 (387)
T ss_pred ceEEEeechhhccCcCceeEEEecCH
Confidence 579999999976322 239998876
No 67
>PRK08960 hypothetical protein; Provisional
Probab=99.84 E-value=4.2e-19 Score=170.04 Aligned_cols=226 Identities=10% Similarity=0.019 Sum_probs=155.5
Q ss_pred ccccccChHHHHHHHHHHHHH----HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (356)
++++.+.+..+..+.+..... .+.++|..++++ +|+.+++++.+.+.... .+| ....+..+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~Y------~~~~g~~~lr~~ia 79 (387)
T PRK08960 7 RRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGH-TRY------TAARGLPALREAIA 79 (387)
T ss_pred hHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-Ccc------CCCCCCHHHHHHHH
Confidence 344555666666665543332 356888877764 58899999998876421 122 22345677887787
Q ss_pred HHHHHHcC--CCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC-
Q 018401 99 KRALEAFR--LDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES- 175 (356)
Q Consensus 99 ~~la~~~g--~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~- 175 (356)
+++.+.+| ++++++++|+|+++++..++.++++|||+|++++++|.++.. .+...|.+++.++ ++.+
T Consensus 80 ~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~ 149 (387)
T PRK08960 80 GFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRH--------FLRLVEGAAQLVP--VGPDS 149 (387)
T ss_pred HHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCCeEEEEe--cCccc
Confidence 88877666 477888889999999988889999999999999987766643 2334566666664 4423
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC-C-CCCCCCCccE
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-V-IPSPFEYADV 248 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~-~-~~~~l~~~D~ 248 (356)
++.+|++++++++.+ ++++++++ |+| ||...+ +++|+++|+++|+++|+|+++.. ....+ . ....+..-.+
T Consensus 150 ~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~-~~~~~~~~~~~~~~~~vi 227 (387)
T PRK08960 150 RYQLTPALVERHWNA-DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHG-LTYGVDAASVLEVDDDAF 227 (387)
T ss_pred CCCCCHHHHHHHhCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCChhhccCCEE
Confidence 457899999998886 77887776 888 897776 45667778999999999999642 11111 0 0011111237
Q ss_pred EEeCCCCcCCCC--CceEEEEec
Q 018401 249 VTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 249 ~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
++.|.+|.++.| +.|+++.++
T Consensus 228 ~~~S~SK~~g~~GlRiG~~~~~~ 250 (387)
T PRK08960 228 VLNSFSKYFGMTGWRLGWLVAPP 250 (387)
T ss_pred EEeecccccCCcccEEEEEEcCH
Confidence 889999977433 349999876
No 68
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.84 E-value=9.3e-20 Score=174.96 Aligned_cols=236 Identities=16% Similarity=0.132 Sum_probs=158.0
Q ss_pred cCCeeecCCC---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHH
Q 018401 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~ 123 (356)
+.|+|..+.. .+++.+.+++.+.+.. +..++++.+.. .+..++++++++++++++|.+ +++++++ |++++.
T Consensus 43 ~~i~l~~~~~~~~~~~~~i~~a~~~~~~~-~~~~~~~~~~~---~G~~~l~~~l~~~la~~~g~~-~~i~~ts-G~~a~~ 116 (397)
T PRK06939 43 EVINFCANNYLGLANHPELIAAAKAALDS-HGFGMASVRFI---CGTQDLHKELEEKLAKFLGTE-DAILYSS-CFDANG 116 (397)
T ss_pred eEEEeeccCccccCCCHHHHHHHHHHHHH-cCCCCcccccc---cCCcHHHHHHHHHHHHHhCCC-cEEEEcC-hHHHHH
Confidence 4578876542 2688999999988865 22233332222 233567778889999999976 4444454 577888
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh---c--CCcEEEE
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---F--RPKLIVA 198 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~---~--~~k~v~l 198 (356)
.++.++++|||.|++++++|.++.. .+...+.++..+ +. .|++++++.+.+ . ++++|++
T Consensus 117 ~~~~~l~~~gd~vi~~~~~~~~~~~--------~~~~~~~~~~~~--~~------~d~~~l~~~i~~~~~~~~~~~~v~~ 180 (397)
T PRK06939 117 GLFETLLGKEDAIISDALNHASIID--------GVRLCKAKRYRY--AN------NDMADLEAQLKEAKEAGARHKLIAT 180 (397)
T ss_pred HHHHHhCCCCCEEEEEhhhhHHHHH--------HHHhcCCceEEe--CC------CCHHHHHHHHHhhhccCCCCeEEEE
Confidence 8888999999999999988766543 333445444333 22 478888887753 2 5667776
Q ss_pred c-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCC-CCccEEEeCCCCcCCCCCceEEEEecCc
Q 018401 199 G-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGV 271 (356)
Q Consensus 199 ~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~~~ 271 (356)
+ ..+ +|...++++|.++|++||+++|+|++|+.|.....- ...++ .++|++++|+||+++|+++|+++.++
T Consensus 181 ~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~~-- 258 (397)
T PRK06939 181 DGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGRK-- 258 (397)
T ss_pred ecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeCH--
Confidence 5 333 788899999999999999999999999766443210 01111 14789999999999888889998876
Q ss_pred chhccCCcchhhhHHHhhccccCCCCC-CCCcHHHHHHHHHHHHHHhc
Q 018401 272 KEINKQGKEVFYDYEEKINQAVFPGLQ-GGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 272 ~~~~~~g~~~~~~~~~~~~~~~~~~~~-gt~~~~~~~al~~Al~~~~~ 318 (356)
++.+.+.....+... ++++....+++.++++++.+
T Consensus 259 ------------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 294 (397)
T PRK06939 259 ------------EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEE 294 (397)
T ss_pred ------------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc
Confidence 445544432222222 44455556667777877753
No 69
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.7e-19 Score=159.78 Aligned_cols=279 Identities=16% Similarity=0.135 Sum_probs=184.1
Q ss_pred cCCeeecCCC-CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHH
Q 018401 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 47 ~~i~L~~~~~-~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~ 125 (356)
..|-|..+.- ..|+.+.....+...+.|.++...++......|. .+-+.+-.+++-+.|+.+.+++++++++.-+..+
T Consensus 31 ~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~-~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~ 109 (407)
T COG3844 31 GVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWF-DLPERLGDKLAPLIGARAGEVVVTDTTSINLFKV 109 (407)
T ss_pred CeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchh-hchhHHHHHhhhhhcCCCCceEEeCCcchHHHHH
Confidence 4455543322 3565666666665554465444433332222333 3344677999999999988888887777444445
Q ss_pred HHhh--cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-
Q 018401 126 YTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA- 202 (356)
Q Consensus 126 l~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n- 202 (356)
+.+. ..+|+.||+++-.. ..+ .++....-+.+.+... ++ ...+.++++++++++ ++.+|+++..|
T Consensus 110 L~aalr~~~~r~vIv~E~~~--fpT-dly~a~g~~~~~~~~~-----~~---~~~~~P~~~~~~~~d-d~AvV~L~~V~y 177 (407)
T COG3844 110 LAAALRPQEGRRVIVSEGDN--FPT-DLYIAEGLADLLGIGY-----DL---EGVIAPRALEEAITD-DVAVVLLSHVNY 177 (407)
T ss_pred HHHHhccCCCceEEeecCCC--CCc-chhhhcchhhhhcccc-----cc---eeeeChHHHHHhhcc-ceEEEEeccccc
Confidence 5554 45699999876221 211 1222222233343221 11 245677899999988 89999998666
Q ss_pred -CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc--eEEEEecCcch----hc
Q 018401 203 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG--AMIFFRKGVKE----IN 275 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g--G~l~~~~~~~~----~~ 275 (356)
||...++.+|.+++|++|+++++|-||++|.+|.++...+ +|+.+.++||+|+|.+| +++++.++... ..
T Consensus 178 ~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~g---aDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~l 254 (407)
T COG3844 178 KTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAG---ADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPL 254 (407)
T ss_pred cccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccC---CCeeeeeeceeccCCCCCceeEEecccccccccccc
Confidence 8999999999999999999999999999999999998888 99999999999976555 89998876532 23
Q ss_pred cCCcchh--hhHHHhhccccCCC--CCCCCcHHHHHHHHHHHHHHhcccccchhhcccccc---hHHHHhhhcc
Q 018401 276 KQGKEVF--YDYEEKINQAVFPG--LQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHV---YPAFVSNQNN 342 (356)
Q Consensus 276 ~~g~~~~--~~~~~~~~~~~~~~--~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 342 (356)
.++++-. +.+........-.. ..||+++..++++..||+...+ ..+..+|++++.+ +.+++...+.
T Consensus 255 sgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~-~~i~~lR~kSlaLTd~fieLvEa~~~ 327 (407)
T COG3844 255 SGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFAD-VDITELRKKSLALTDYFIELVEARCE 327 (407)
T ss_pred ccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhh-cCHHHHHHhhhHHHHHHHHHHHhccc
Confidence 3333211 12222222221111 2399999999999999998876 5688899888865 3555544443
No 70
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.83 E-value=4.1e-19 Score=169.77 Aligned_cols=221 Identities=14% Similarity=0.065 Sum_probs=149.8
Q ss_pred cccChHHHHHHHHHHHHH---HcCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHH
Q 018401 28 EVVDPEIADIIEHEKARQ---WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (356)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~---~~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la 102 (356)
..+.+..|..+++..... .+.|+|..+++ ++++.+.+++.+.+.......| +...+..+ +|++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y------~~~~g~~~----lr~~ia 76 (380)
T PRK06225 7 AKVPPSGFKTSNEFFDYVFKDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKY------PPPEGFPE----LRELIL 76 (380)
T ss_pred cccCcchhhhHHHHHHHHhhcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCC------CCCcchHH----HHHHHH
Confidence 445666666666643322 35688887777 4588999999988765221122 22233344 558888
Q ss_pred HHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHH
Q 018401 103 EAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 182 (356)
Q Consensus 103 ~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~ 182 (356)
+++|++++++++++|+++++..++.+++.+||+|+++++.|..+ ...+...|..++.+++.....++.+|++
T Consensus 77 ~~l~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~--------~~~~~~~g~~~~~v~~~~~~~~~~~d~~ 148 (380)
T PRK06225 77 KDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLII--------DNFASRFGAEVIEVPIYSEECNYKLTPE 148 (380)
T ss_pred HhcCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch--------HHHHHHhCceEEeeccccccCCccCCHH
Confidence 99999888888899999999989999999999999998655432 2233455666655543222124579999
Q ss_pred HHHHHhhhcCCcEEEEc-CCC-CCCcc---cHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC-CccEEEeCCCCc
Q 018401 183 QLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKS 256 (356)
Q Consensus 183 ~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~-~~D~~~~s~~K~ 256 (356)
++++.+.+ ++++++++ ++| +|.+. ++++|.++|+++|+++|+|+++.- ..........+. ...+++.|++|+
T Consensus 149 ~l~~~~~~-~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~i~~~s~SK~ 226 (380)
T PRK06225 149 LVKENMDE-NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRD-FAREHTLAAEYAPEHTVTSYSFSKI 226 (380)
T ss_pred HHHhhcCC-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHH-HhccCCchhhcCCCCEEEEeechhh
Confidence 99999886 78998877 777 88655 488899999999999999998631 111000000001 245777788998
Q ss_pred CCCCCc---eEEEEec
Q 018401 257 LRGPRG---AMIFFRK 269 (356)
Q Consensus 257 l~gp~g---G~l~~~~ 269 (356)
+ |++| |++++++
T Consensus 227 ~-g~~G~RiG~i~~~~ 241 (380)
T PRK06225 227 F-GMAGLRIGAVVATP 241 (380)
T ss_pred c-CCccceeEEEecCH
Confidence 8 4334 9998876
No 71
>PRK08068 transaminase; Reviewed
Probab=99.83 E-value=7.3e-19 Score=168.53 Aligned_cols=206 Identities=16% Similarity=0.132 Sum_probs=142.7
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC--CCCC-ccccCCCchHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPE-KWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~-~v~v~~sgs~a 121 (356)
+.|+|..+... +++.+.+++.+.+....... |+...+..++++++++++.+.+| ++++ ++++|+|++++
T Consensus 33 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~------Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~ 106 (389)
T PRK08068 33 DVINLGQGNPDQPTPEHIVEALQEAAENPANHK------YSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAG 106 (389)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCC------CCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHH
Confidence 56888766543 45778888888765421112 33335567888888888877777 4676 67778888888
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC-CCCCCHHHHHHHhhhcCCcEEEEc-
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TGYIDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~i~~~~~k~v~l~- 199 (356)
+..++.+++++||.|++++|+|..+. ..+...|++++.+ +.+.+ ++.+|++++++++.+ ++++|+++
T Consensus 107 l~~~~~~~~~~gd~vlv~~P~y~~~~--------~~~~~~g~~~~~i--~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~ 175 (389)
T PRK08068 107 LVELPQCLMNPGDTILVPDPGYPDYL--------SGVALARAQFETM--PLIAENNFLPDYTKIPEEVAE-KAKLMYLNY 175 (389)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchH--------HHHHhcCCEEEEe--ecccccCCCCCHHHHHHhccc-cceEEEEEC
Confidence 88788999999999999996665443 2445667667656 44433 457899999998876 79999998
Q ss_pred CCC-CCCcccH---HHHHHHHHHcCCEEEEeccchhhhccc----CCCCC-CCCCccEEEeCCCCcCCCC--CceEEEEe
Q 018401 200 ASA-YARLYDY---ERIRKVCNKQKAIMLADMAHISGLVAA----GVIPS-PFEYADVVTTTTHKSLRGP--RGAMIFFR 268 (356)
Q Consensus 200 ~~n-~g~~~~l---~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~-~l~~~D~~~~s~~K~l~gp--~gG~l~~~ 268 (356)
|+| ||.+.+. ++|.++|+++++++|+|+++..-.... ..... ......+++.|.+|.|+.| +-|+++.+
T Consensus 176 P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~ 255 (389)
T PRK08068 176 PNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGN 255 (389)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecC
Confidence 888 9987775 577778999999999999974211110 10000 0011348889999987333 33998876
Q ss_pred c
Q 018401 269 K 269 (356)
Q Consensus 269 ~ 269 (356)
+
T Consensus 256 ~ 256 (389)
T PRK08068 256 E 256 (389)
T ss_pred H
Confidence 6
No 72
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.83 E-value=5.3e-19 Score=169.46 Aligned_cols=227 Identities=11% Similarity=0.067 Sum_probs=157.2
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la 102 (356)
+++....+.++..+.+..+.....++|..+++ ++++.+++++.+.+..... ..|....+..+++++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~G~~~lr~~~~~~l~ 79 (389)
T PRK05957 6 SRMDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPEN------HKYQAVQGIPPLLEAITQKLQ 79 (389)
T ss_pred HHHHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHH
Confidence 34455556666666555443345688887766 3688899999887754211 123333556788889999999
Q ss_pred HHcCCC---CCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCC
Q 018401 103 EAFRLD---PEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 179 (356)
Q Consensus 103 ~~~g~~---~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 179 (356)
+++|.+ ++++++++|+++++..++.+++++||.|+++++.|..+.. .+...|.+++.+ +.+ +++.+
T Consensus 80 ~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v--~~~-~~~~~ 148 (389)
T PRK05957 80 QDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM--------AITMAGCQPILV--PTD-DNYQL 148 (389)
T ss_pred HHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH--------HHHhcCCEEEEe--ecC-CCCCc
Confidence 999973 5567778888888887888889999999999866644422 233456666555 444 45689
Q ss_pred CHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc-C-CCCCCC-C--CccEE
Q 018401 180 DYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA-G-VIPSPF-E--YADVV 249 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~-~-~~~~~l-~--~~D~~ 249 (356)
|++++++++++ ++|+|+++ ++| ||.+.+ +++|+++|+++|+++|+|+++.--.... . .....+ + .-.++
T Consensus 149 d~~~l~~~i~~-~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (389)
T PRK05957 149 QPEAIEQAITP-KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTIS 227 (389)
T ss_pred CHHHHHHhcCc-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEE
Confidence 99999999976 89999887 777 898776 8889999999999999999975221110 0 000011 1 13478
Q ss_pred EeCCCCcCCCC--CceEEEEec
Q 018401 250 TTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 250 ~~s~~K~l~gp--~gG~l~~~~ 269 (356)
+.|.+|.++.| +-|+++.++
T Consensus 228 ~~S~SK~~g~~GlRiG~~~~~~ 249 (389)
T PRK05957 228 LYSLSKAYGFASWRIGYMVIPI 249 (389)
T ss_pred EecchhhccCccceeEEEecCH
Confidence 88999976323 239998876
No 73
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.83 E-value=1.5e-19 Score=172.42 Aligned_cols=185 Identities=15% Similarity=0.117 Sum_probs=138.2
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCCCe
Q 018401 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPHDR 135 (356)
Q Consensus 57 ~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~gd~ 135 (356)
..+++.++++.+.+.+.+. + .+ ....+ +++.+++++|++. .++++||++++.+++.++ +++||+
T Consensus 11 ~~~~~e~~~~~~~l~~~~~--~------~g-~~~~~----le~~la~~~g~~~--~v~~~sgt~al~lal~al~~~~Gd~ 75 (379)
T PRK11658 11 AMGDEELAAVKEVLRSGWI--T------TG-PKNQA----LEQAFCQLTGNQH--AIAVSSATAGMHITLMALGIGPGDE 75 (379)
T ss_pred CCCHHHHHHHHHHHHcCCc--c------CC-HhHHH----HHHHHHHHhCCCe--EEEECCHHHHHHHHHHHcCCCCCCE
Confidence 3466778888887765321 1 11 22334 4588899999864 355889999999899998 899999
Q ss_pred eeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHH
Q 018401 136 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKV 215 (356)
Q Consensus 136 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~l 215 (356)
|++++++|.++.. .+...|+.++.+ +++.+++.+|++++++++++ ++|+|+.+. .+|...|+++|.++
T Consensus 76 Viv~~~~~~~~~~--------~~~~~G~~~v~v--d~~~~~~~~d~~~l~~~i~~-~tkav~~~~-~~G~~~d~~~i~~~ 143 (379)
T PRK11658 76 VITPSLTWVSTLN--------MIVLLGATPVMV--DVDRDTLMVTPEAIEAAITP-RTKAIIPVH-YAGAPADLDAIRAI 143 (379)
T ss_pred EEECCCcHHHHHH--------HHHHcCCEEEEE--ecCCCcCCcCHHHHHHhccc-CCeEEEEeC-CCCCcCCHHHHHHH
Confidence 9999988876643 333457666555 55545567899999999987 899887442 27888999999999
Q ss_pred HHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCceEEEEec
Q 018401 216 CNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 269 (356)
Q Consensus 216 a~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~ 269 (356)
|+++|+++|+|++|+.|....+... +-.+.++++++.+|.+.++.||++++++
T Consensus 144 a~~~gi~vi~D~a~a~g~~~~~~~~-g~~g~~~~Sf~~~K~l~~g~GG~v~~~~ 196 (379)
T PRK11658 144 GERYGIPVIEDAAHAVGTYYKGRHI-GARGTAIFSFHAIKNITCAEGGLVVTDD 196 (379)
T ss_pred HHHcCCeEEEECCCccCCeECCeec-CCCCCEEEeCCCCCcCcccCceEEEECC
Confidence 9999999999999999877643211 1123689999999999888889888764
No 74
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.83 E-value=5.8e-19 Score=168.89 Aligned_cols=207 Identities=14% Similarity=0.065 Sum_probs=144.6
Q ss_pred HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCC-ccccCCCchH
Q 018401 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPE-KWGGSLSGSP 120 (356)
Q Consensus 46 ~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~-~v~v~~sgs~ 120 (356)
++.++|..+++. +++.+.+++.+.+......+| +...+..++++++++++.+.+|. +++ ++++++|+++
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y------~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~ 102 (383)
T TIGR03540 29 VDVISLGIGDPDLPTPKHIVEALCKAAENPENHRY------PSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKE 102 (383)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCC------CCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHH
Confidence 356788877664 577889999887654211223 33345678888888888888776 454 4666888889
Q ss_pred HHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 018401 121 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TGYIDYDQLEKSATLFRPKLIVAG 199 (356)
Q Consensus 121 a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~i~~~~~k~v~l~ 199 (356)
++..++++++++||.|++++++|..+. ..+...|.++..++ .+.+ ++.+|++++++++.+ ++++|+++
T Consensus 103 ~l~~~~~~~~~~gd~vlv~~P~y~~~~--------~~~~~~G~~v~~v~--~~~~~g~~~d~~~l~~~~~~-~~~~v~i~ 171 (383)
T TIGR03540 103 GIAHIPLAFVNPGDIVLVPDPGYPVYR--------IGTLFAGGEPYEMP--LKEENGFLPDFDAIPEDIAK-KAKLMFIN 171 (383)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCcchH--------HHHHhcCCEEEEEe--cCcccCCccCHHHHHhhccc-cceEEEEe
Confidence 988888999999999999996664432 23445676666564 4433 356899999998876 89999998
Q ss_pred -CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcc----cCCCCCC-CCCccEEEeCCCCcCCCC--CceEEEE
Q 018401 200 -ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA----AGVIPSP-FEYADVVTTTTHKSLRGP--RGAMIFF 267 (356)
Q Consensus 200 -~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~----~~~~~~~-l~~~D~~~~s~~K~l~gp--~gG~l~~ 267 (356)
|+| +|.+.+ +++|.++|++||+++|+|+++...... ..+.... .....+++.|.+|.++.| +-|+++.
T Consensus 172 ~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~ 251 (383)
T TIGR03540 172 YPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG 251 (383)
T ss_pred CCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeC
Confidence 888 898777 678888999999999999998632211 1111110 012347788999977423 2398887
Q ss_pred ec
Q 018401 268 RK 269 (356)
Q Consensus 268 ~~ 269 (356)
++
T Consensus 252 ~~ 253 (383)
T TIGR03540 252 NA 253 (383)
T ss_pred CH
Confidence 66
No 75
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.83 E-value=7e-19 Score=168.58 Aligned_cols=228 Identities=14% Similarity=0.155 Sum_probs=153.2
Q ss_pred ccccccChHHHHHHHHHHHH----HHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (356)
+++..+.+.++..+...... ..+.++|..++++ +++.+.+++.+.+......+| +...+..++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y------~~~~G~~~lr~aia 78 (388)
T PRK07366 5 QRLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGY------LLFHGTLDFREAAA 78 (388)
T ss_pred hhhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCC------CCCCCCHHHHHHHH
Confidence 34455555566544443322 2356889887774 578899999887653211122 33345678888888
Q ss_pred HHHHHHcCC--CCC-ccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 99 KRALEAFRL--DPE-KWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 99 ~~la~~~g~--~~~-~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
+++.+.+|. +++ +|++|+|+++++..++.++++|||.|++.+|+|..+ ...+...|+++..++ .+.+
T Consensus 79 ~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~--------~~~~~~~g~~~~~v~--~~~~ 148 (388)
T PRK07366 79 QWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSH--------AGGVYLAGGQIYPMP--LRAE 148 (388)
T ss_pred HHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcch--------HHHHHhcCCEEEEEE--CCCc
Confidence 888877774 676 577788888999988899999999999999655444 334556777776664 4423
Q ss_pred -CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCC-CC--CCCC--
Q 018401 176 -TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV-IP--SPFE-- 244 (356)
Q Consensus 176 -~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~-~~--~~l~-- 244 (356)
.+.+|++++++.+.+ ++|+++++ |+| ||.+.+ +++|.++|++||++||+|+++.--...... .. ..+.
T Consensus 149 ~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 227 (388)
T PRK07366 149 NDFLPVFADIPTEVLA-QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPE 227 (388)
T ss_pred cCCCCCHHHHHHhhcc-cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCC
Confidence 357899999887766 78999988 778 897766 556777899999999999997422111100 00 1111
Q ss_pred -CccEEEeCCCCcCC--CCCceEEEEec
Q 018401 245 -YADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 245 -~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
..-+++.|++|.++ |.+-|+++.++
T Consensus 228 ~~~vi~~~SfSK~~g~~GlRiG~~v~~~ 255 (388)
T PRK07366 228 KSVSIEFFTLSKSYNMGGFRIGFAIGNA 255 (388)
T ss_pred cccEEEEeecccccCCcchhheehcCCH
Confidence 12367889999873 33449998766
No 76
>PRK12414 putative aminotransferase; Provisional
Probab=99.83 E-value=5.7e-19 Score=168.95 Aligned_cols=226 Identities=15% Similarity=0.198 Sum_probs=158.7
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la 102 (356)
+++..+.+.++..+.+. ..+.+.|+|..++++ +++.+.+++.+.+.... ..|+...+...++++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~l~ 80 (384)
T PRK12414 9 SKLPDVGTTIFTVIGQL-AAQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-------NQYAPMAGIAALREALAEKTE 80 (384)
T ss_pred HhcccCCccHHHHHHHH-HHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-------CCcCCCCCcHHHHHHHHHHHH
Confidence 34455566666665554 344567899887764 47888888887665421 123444567788899999999
Q ss_pred HHcCCC--C-CccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCC
Q 018401 103 EAFRLD--P-EKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 179 (356)
Q Consensus 103 ~~~g~~--~-~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 179 (356)
+++|++ + +++++++|+++++..+++++++|||+|++++++|..+.. .+...|.+++.+ +.+.+++.+
T Consensus 81 ~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v--~~~~~~~~~ 150 (384)
T PRK12414 81 RLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAP--------IVRLQGATPVAI--KLSPEDFRV 150 (384)
T ss_pred HHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHcCCEEEEE--ecCcccccc
Confidence 999984 3 467779999999988999999999999999977654322 334456666555 455345679
Q ss_pred CHHHHHHHhhhcCCcEEEEc-CCC-CCCcc---cHHHHHHHHHHcCCEEEEeccchhhhccc----CCCCC-CCCCccEE
Q 018401 180 DYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAA----GVIPS-PFEYADVV 249 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~-~l~~~D~~ 249 (356)
|++.|++++++ ++++|+++ ++| ||.+. ++++|+++|++||+++|+|+++..-.... .+... ++.+-.++
T Consensus 151 d~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~ 229 (384)
T PRK12414 151 NWDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVI 229 (384)
T ss_pred CHHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEE
Confidence 99999999876 89999888 777 89764 57788899999999999999975322111 01110 11113489
Q ss_pred EeCCCCcCC--CCCceEEEEec
Q 018401 250 TTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 250 ~~s~~K~l~--gp~gG~l~~~~ 269 (356)
+.|++|.++ |.+-|+++.++
T Consensus 230 ~~SfSK~~~~pGlRiG~~v~~~ 251 (384)
T PRK12414 230 VSSFGKSYHVTGWRVGYCLAPA 251 (384)
T ss_pred EecccccccCccceEEEEecCH
Confidence 999999773 33339998876
No 77
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.83 E-value=7.8e-19 Score=168.01 Aligned_cols=231 Identities=13% Similarity=0.076 Sum_probs=157.4
Q ss_pred hhhcccccccChHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHH
Q 018401 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (356)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (356)
+++++++.......+..+.+..+...+.++|..+++. +++.+++++.+.+.... .. |+...+...++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~------Y~~~~G~~~lr~~ia 76 (384)
T PRK06348 4 KFLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKGH-TR------YTDSGGDVELIEEII 76 (384)
T ss_pred hHHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCcHHHHHHHH
Confidence 3445556666777776666654333467888877664 35677776655443311 12 333345567888888
Q ss_pred HHHHHHcCC--CCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC-CC
Q 018401 99 KRALEAFRL--DPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN-ES 175 (356)
Q Consensus 99 ~~la~~~g~--~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~ 175 (356)
+++.+.+|. +++++++|+|+++++..++.++++|||+|++++++|..+. ..+...|..++.+ +.. .+
T Consensus 77 ~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~--------~~~~~~g~~~~~~--~~~~~~ 146 (384)
T PRK06348 77 KYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYK--------DQIEMVGGKPIIL--ETYEED 146 (384)
T ss_pred HHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchH--------HHHHHcCCEEEEe--cCCcCc
Confidence 888877665 7788888999999999899999999999999996665443 2444556555444 443 23
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCC-CCC---CCc
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPF---EYA 246 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~-~~l---~~~ 246 (356)
++.+|+++|++++.+ ++++|+++ |+| ||.+.+ +++|.++|+++|+++|+|+++.--........ ..+ ...
T Consensus 147 ~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 225 (384)
T PRK06348 147 GFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPER 225 (384)
T ss_pred CCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCc
Confidence 457999999998876 88999887 888 887765 67788889999999999999753221111000 011 123
Q ss_pred cEEEeCCCCcCC--CCCceEEEEec
Q 018401 247 DVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 247 D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
.+++.|.+|.++ |.+.|+++.++
T Consensus 226 vi~~~SfSK~~~l~GlRiG~~v~~~ 250 (384)
T PRK06348 226 TITFGSFSKDFAMTGWRIGYVIAPD 250 (384)
T ss_pred EEEEecchhccCCccccceeeecCH
Confidence 588899999874 44449999876
No 78
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.82 E-value=5.8e-19 Score=168.70 Aligned_cols=236 Identities=18% Similarity=0.158 Sum_probs=153.8
Q ss_pred HcCCeeecCCC--C-CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHH
Q 018401 46 WKGLELIPSEN--F-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 46 ~~~i~L~~~~~--~-~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~ 122 (356)
++.|++..+++ + ++|.|++++.+.+.. +..+++..+.. .+...+.+++++.++++++. + +.+++++|++++
T Consensus 39 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~---~g~~~~~~~l~~~la~~~~~-~-~~i~~~~g~~~~ 112 (385)
T PRK05958 39 RRMLNFASNDYLGLARHPRLIAAAQQAARR-YGAGSGGSRLV---TGNSPAHEALEEELAEWFGA-E-RALLFSSGYAAN 112 (385)
T ss_pred ceEEEeeCCCcccCCCCHHHHHHHHHHHHh-cCCCCCCcCcc---cCCcHHHHHHHHHHHHHhCC-C-cEEEECcHHHHH
Confidence 45788887764 2 578999999998865 32222221111 12234556677899999985 3 345566777777
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG- 199 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k~v~l~- 199 (356)
..++.+++++||.|++.+++|+++.. ...+.|..++.+ +. .|++++++.+.+. ++++++++
T Consensus 113 ~~~l~~~~~~gd~V~~~~~~~~~~~~--------~~~~~g~~~~~~--~~------~d~~~l~~~i~~~~~~~~lvi~~~ 176 (385)
T PRK05958 113 LAVLTALAGKGDLIVSDKLNHASLID--------GARLSRARVRRY--PH------NDVDALEALLAKWRAGRALIVTES 176 (385)
T ss_pred HHHHHHhCCCCCEEEEeCccCHHHHH--------HHHhcCCceEEe--CC------CCHHHHHHHHHhccCCCeEEEEEe
Confidence 76778889999999999988876643 233445555444 22 3789999988652 24455554
Q ss_pred CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccC-C--CC-CCCC--CccEEEeCCCCcCCCCCceEEEEecCcc
Q 018401 200 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-V--IP-SPFE--YADVVTTTTHKSLRGPRGAMIFFRKGVK 272 (356)
Q Consensus 200 ~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~-~--~~-~~l~--~~D~~~~s~~K~l~gp~gG~l~~~~~~~ 272 (356)
+.+ +|...++++|.++|++||+++|+|++|+.|..... . .. ..+. ..++++.|+||++ |+.||+++.++
T Consensus 177 ~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Gg~~~~~~--- 252 (385)
T PRK05958 177 VFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSGAAVLGSE--- 252 (385)
T ss_pred cccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCCcEEEcCH---
Confidence 334 78899999999999999999999999987654311 0 00 0111 2458899999988 55678777765
Q ss_pred hhccCCcchhhhHHHhhccccCCCCC-CCCcHHHHHHHHHHHHHHhc
Q 018401 273 EINKQGKEVFYDYEEKINQAVFPGLQ-GGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~-gt~~~~~~~al~~Al~~~~~ 318 (356)
++.+.+.....+... ++++...++++.++++.+.+
T Consensus 253 -----------~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~ 288 (385)
T PRK05958 253 -----------TLIDYLINRARPFIFTTALPPAQAAAARAALRILRR 288 (385)
T ss_pred -----------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc
Confidence 344443322112222 34556667777788887754
No 79
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.82 E-value=1.1e-18 Score=167.64 Aligned_cols=225 Identities=11% Similarity=0.054 Sum_probs=154.0
Q ss_pred cccccChHHHHHHHHHHHHH-----HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHH
Q 018401 26 PLEVVDPEIADIIEHEKARQ-----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (356)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~-----~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (356)
++..+.++.+..+.+..+.. ++.|+|..++++ +++.+++++.+.+... ..|+ ...+..+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~--~~Y~------~~~G~~~lr~~ia 75 (396)
T PRK09147 4 RLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLDGL--ASYP------TTAGLPALREAIA 75 (396)
T ss_pred hhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhhhh--cCCC------CCCCCHHHHHHHH
Confidence 44555666666665554332 367888877764 4778888888766431 1333 2344567888888
Q ss_pred HHHHHHcC---CCCC-ccccCCCchHHHHHHHHhhcCC---CCeeeecCCCCCcccCcccccccccccccceeeEEEecc
Q 018401 99 KRALEAFR---LDPE-KWGGSLSGSPSNFQVYTALLKP---HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 171 (356)
Q Consensus 99 ~~la~~~g---~~~~-~v~v~~sgs~a~~~~l~al~~~---gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 171 (356)
+++.+.+| ++++ ++++++|+++++..+++++++| ||.|++++|.| ..+...+...|+++..+|
T Consensus 76 ~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y--------~~~~~~~~~~g~~~~~vp-- 145 (396)
T PRK09147 76 AWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFY--------QIYEGAALLAGAEPYFLN-- 145 (396)
T ss_pred HHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCc--------cchHHHHHhcCCEEEEec--
Confidence 99988888 4554 6777989999999899999999 99999998544 333334556677776564
Q ss_pred cCCC-CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCC-----
Q 018401 172 LNES-TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP----- 240 (356)
Q Consensus 172 ~~~~-~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~----- 240 (356)
.+.+ ++.+|++++++.+.+ ++|+++++ |+| ||.+.+ +++|.++|++|+++||+|+++..-........
T Consensus 146 ~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 224 (396)
T PRK09147 146 CDPANNFAPDFDAVPAEVWA-RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLE 224 (396)
T ss_pred cCccccCccCHHHHHHHHhh-ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhh
Confidence 4423 457999999988876 89999988 888 897775 66778889999999999999754221110000
Q ss_pred ----CCCC--CccEEEeCCCCcCC--CCCceEEEEec
Q 018401 241 ----SPFE--YADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 241 ----~~l~--~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
.+.. .--+++.|++|.++ |.+-|+++.++
T Consensus 225 ~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~ 261 (396)
T PRK09147 225 AAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDA 261 (396)
T ss_pred hccccCccccccEEEEeccccccCCccceeeeecCCH
Confidence 0000 12388999999643 34449988776
No 80
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.82 E-value=1.6e-18 Score=166.78 Aligned_cols=227 Identities=12% Similarity=0.062 Sum_probs=154.3
Q ss_pred ccccccChHHHHHHHHHHHHH----HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (356)
+++..+.++.+..+....... .+.++|..++++ +++.+++++.+.+......+|+ ..+...+++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-------~~G~~~lr~aia 79 (399)
T PRK07681 7 TRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-------LSGIQEFHEAVT 79 (399)
T ss_pred HHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-------CCCcHHHHHHHH
Confidence 334444455555555443322 356888877764 5788888888876532111222 134567888888
Q ss_pred HHHHHHcCC--CC-CccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 99 KRALEAFRL--DP-EKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 99 ~~la~~~g~--~~-~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
+++.+.+|. ++ ++|++|+|+++++..++.+++++||.|++++|+|..+ ...+...|+++..+ +++.+
T Consensus 80 ~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~--------~~~~~~~G~~~~~v--~~~~~ 149 (399)
T PRK07681 80 EYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAY--------ETGIQMAGATSYYM--PLKKE 149 (399)
T ss_pred HHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccch--------HHHHHhcCCEEEEE--ecCCC
Confidence 888877775 66 6777799999999988899999999999999666443 33455667666555 45433
Q ss_pred -CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC--CCCCCCC---
Q 018401 176 -TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG--VIPSPFE--- 244 (356)
Q Consensus 176 -~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~--~~~~~l~--- 244 (356)
++.+|++++++++.+ ++++|+++ |+| ||.+.+ +++|.++|+++|++||+|+++.--..... .....+.
T Consensus 150 ~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~ 228 (399)
T PRK07681 150 NDFLPDLELIPEEIAD-KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAK 228 (399)
T ss_pred CCCcCCHHHHHHhccc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCc
Confidence 357899999988876 89999998 888 898777 66788889999999999999863221110 0001111
Q ss_pred CccEEEeCCCCcCCCC--CceEEEEec
Q 018401 245 YADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 245 ~~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
...+++.|++|.++.| +-|+++.++
T Consensus 229 ~~~i~~~S~SK~~~~~GlRiG~~i~~~ 255 (399)
T PRK07681 229 EVGVEINSLSKSYSLAGSRIGYMIGNE 255 (399)
T ss_pred ccEEEEeecccccCCccceeEEEecCH
Confidence 1357888999977423 339998766
No 81
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.82 E-value=3.8e-19 Score=183.68 Aligned_cols=218 Identities=13% Similarity=0.036 Sum_probs=152.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCccccCCCch----HHHHHHHHhhcCC-CC----eeeecCCCCCcccCcccccccccc
Q 018401 88 EYIDMAESLCQKRALEAFRLDPEKWGGSLSGS----PSNFQVYTALLKP-HD----RIMALDLPHGGHLSHGYQTDTKKI 158 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs----~a~~~~l~al~~~-gd----~Vl~~~~~~~~~~~~~~~~~~~~~ 158 (356)
++..++...+++++++++|+ +.++|+.+++ .++..+++++.++ || +|+++..+|+++..++.
T Consensus 564 ~g~~~~~~~~r~~la~i~g~--~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~------- 634 (993)
T PLN02414 564 QGYQEMFEDLGDLLCEITGF--DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA------- 634 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCC--CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH-------
Confidence 34556667899999999999 5677844444 4666688888766 88 89999999999987654
Q ss_pred cccceeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhc
Q 018401 159 SAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLV 234 (356)
Q Consensus 159 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~--~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~ 234 (356)
..|.+++.++ .+ +++.+|+++|++++++ .++++|+++ ++| .|...|+++|+++||++|+++++|++|..+..
T Consensus 635 -~~G~~vv~v~--~d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~ 710 (993)
T PLN02414 635 -MCGMKIVVVG--TD-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQV 710 (993)
T ss_pred -HCCCEEEEec--cC-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhcc
Confidence 3576776674 45 5679999999999984 267888888 777 56888899999999999999999999988874
Q ss_pred cc-CCCCCCCCCccEEEeCCCCcCCCC-----Cc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHH---
Q 018401 235 AA-GVIPSPFEYADVVTTTTHKSLRGP-----RG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNH--- 304 (356)
Q Consensus 235 ~~-~~~~~~l~~~D~~~~s~~K~l~gp-----~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~--- 304 (356)
.. .....+ +|++++|.||||++| +| |++++++.+.+.+++...+... ....... +...||.+..
T Consensus 711 ~l~~p~~~G---aD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~--~~~~r~~-~s~iGt~~~a~~g 784 (993)
T PLN02414 711 GLTSPGFIG---ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTG--GIPRPEK-TQPLGTISAAPWG 784 (993)
T ss_pred CcCCccccC---CCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCC--CcccccC-CCCcCCccchhhh
Confidence 33 333445 999999999998744 45 8999988765544432110000 0011100 1123564443
Q ss_pred HHHHHHHHHHHHhcccccchh
Q 018401 305 TITGLAVALKQVCTLITFSHI 325 (356)
Q Consensus 305 ~~~al~~Al~~~~~~~~~~~~ 325 (356)
....+..|+.++.. .+.+.+
T Consensus 785 ~al~l~~A~~yi~~-lG~~Gl 804 (993)
T PLN02414 785 SALILPISYTYIAM-MGSEGL 804 (993)
T ss_pred hHHHHHHHHHHHHH-HCHhHH
Confidence 33667778888765 344444
No 82
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.82 E-value=1.7e-18 Score=166.18 Aligned_cols=227 Identities=13% Similarity=0.105 Sum_probs=151.4
Q ss_pred cccccChHHHHHHHHHHHH----HHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHH
Q 018401 26 PLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (356)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (356)
++..+.++.+..+.+..+. ..+.++|..+.+. +|+.+.+++.+.+..... ..|+...+..++++++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~aia~ 84 (394)
T PRK05942 11 RLQALPPYVFARLDELKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQN------HGYPPFEGTASFRQAITD 84 (394)
T ss_pred hhccCCCcHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCC------ccCCCCCCCHHHHHHHHH
Confidence 3445555555544443221 2346788755432 456688877776643111 223333556788888889
Q ss_pred HHHHHcCC--CCCc-cccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-C
Q 018401 100 RALEAFRL--DPEK-WGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-S 175 (356)
Q Consensus 100 ~la~~~g~--~~~~-v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~ 175 (356)
++.+.+|. ++++ +++|+|+++++..++.++++|||+|++++++|..+.. .+...|++++.+ +.+. +
T Consensus 85 ~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v--~~~~~~ 154 (394)
T PRK05942 85 WYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFR--------GPLIAGAQIYPI--ILKPEN 154 (394)
T ss_pred HHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCCEEEEe--ecCCcc
Confidence 98888775 5664 6668888899988888999999999999977765432 233456666555 4442 3
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcc----cCCCCC-CCCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA----AGVIPS-PFEY 245 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~----~~~~~~-~l~~ 245 (356)
++.+|++++++.+.+ ++|+|+++ |+| ||.+.+ +++|.++|+++|+++|+|+++...... ..+... +...
T Consensus 155 ~~~~d~~~l~~~~~~-~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~ 233 (394)
T PRK05942 155 DWLIDLSSIPEEVAQ-QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKD 233 (394)
T ss_pred CCccCHHHHHHhccc-cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccc
Confidence 457999999998876 89999998 888 998877 778888999999999999997532221 111100 0112
Q ss_pred ccEEEeCCCCcCCCC--CceEEEEec
Q 018401 246 ADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 246 ~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
..+.+.|++|.|+.| +.|+++.++
T Consensus 234 ~~i~~~SfSK~~~~~GlRiG~i~~~~ 259 (394)
T PRK05942 234 IGVEFHTLSKTYNMAGWRVGFVVGNR 259 (394)
T ss_pred cEEEEecchhccCChhhheeeeecCH
Confidence 347788999977433 239998876
No 83
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.82 E-value=8.5e-20 Score=172.83 Aligned_cols=247 Identities=9% Similarity=-0.003 Sum_probs=157.1
Q ss_pred CeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCC-Ccccc-CCCchHHHHHHH
Q 018401 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP-EKWGG-SLSGSPSNFQVY 126 (356)
Q Consensus 49 i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~-~~v~v-~~sgs~a~~~~l 126 (356)
..+++++..+++.|++++.+...... +.+. .. ....++.+++++.+++++++++ .+++| ++|||.++.+++
T Consensus 5 ~~f~pGP~~~~~~v~~a~~~~~~~~~---~~~h--r~--~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~ 77 (361)
T TIGR01366 5 GRFGSGPSKVRLEQLQALTTTAASLF---GTSH--RQ--APVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAAT 77 (361)
T ss_pred CcccCCCcCCCHHHHHHHHhcCcccc---ccCc--CC--hHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHH
Confidence 35678888899999999875321110 0001 01 2234566789999999999954 46777 688999999888
Q ss_pred HhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 127 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 127 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
.+++.+ +.+++..-+|+.......... ...+ ++..+++ + .+..++. .+.+ ++++|.++ .+| +|
T Consensus 78 ~~l~~~-~~l~i~~G~~~~~~~~~a~~~----~~~~-~~~~~~~--~-~~~~~~~-----~~~~-~~~lV~~~h~et~tG 142 (361)
T TIGR01366 78 FGLIEK-KSLHLSFGEFSSKFAKAVKLA----PWLG-EPIIVTA--D-PGSAPEP-----QADP-GVDVIAWAHNETSTG 142 (361)
T ss_pred Hhcccc-cccEEecCHHHHHHHHHHHhh----hccC-CceEEec--C-CCCCCCC-----ccCC-CCCEEEEcccCCccc
Confidence 888743 232333333322211111000 0011 2344432 2 2223333 2344 79999998 455 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh----ccCCc
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI----NKQGK 279 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~----~~~g~ 279 (356)
.+.|+++| ++++|+++++|++|++|..++++.. +|++++|+||++++|+| +++++++++... ..+|.
T Consensus 143 ~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~~-----~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~ 214 (361)
T TIGR01366 143 VAVPVRRP---EGSDDALVVIDATSGAGGLPVDIAE-----TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGR 214 (361)
T ss_pred eecccccc---cccCCCeEEEEcCccccCCCCCHHH-----CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCC
Confidence 99999887 5889999999999999999988763 79999999999988877 777777754211 22222
Q ss_pred c--hhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchh
Q 018401 280 E--VFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHI 325 (356)
Q Consensus 280 ~--~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~ 325 (356)
. ...++...+......+..+||++..++++.+|++++.++.+++.+
T Consensus 215 ~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~ 262 (361)
T TIGR01366 215 WVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWA 262 (361)
T ss_pred CCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHH
Confidence 1 112333333222223456899999999999999999876445443
No 84
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.82 E-value=6.5e-19 Score=174.63 Aligned_cols=226 Identities=19% Similarity=0.122 Sum_probs=155.0
Q ss_pred hcccccccChHHHHHHHHHHHHH----HcCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHH
Q 018401 23 LNAPLEVVDPEIADIIEHEKARQ----WKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (356)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 93 (356)
.++++.++...+...+....+.. .+.|+|..++. ++|+.+++++.+.+... .+| +...+..++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~--~~Y------~~~~G~~~l 190 (517)
T PRK13355 119 KSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT--EGY------SDSKGLFSA 190 (517)
T ss_pred hhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC--CCC------CCCcChHHH
Confidence 45666677766666554443322 35688887544 34889999998877542 133 333567788
Q ss_pred HHHHHHHHHHHcC--CCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecc
Q 018401 94 ESLCQKRALEAFR--LDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 171 (356)
Q Consensus 94 ~~~~~~~la~~~g--~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 171 (356)
++++.+++.+..+ +++++|++++|+++++..++.+++++||+|++++++|..+ ...+...|+.++.+ +
T Consensus 191 Reaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y--------~~~~~~~g~~~v~~--~ 260 (517)
T PRK13355 191 RKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLW--------TACVNLAGGTAVHY--R 260 (517)
T ss_pred HHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCH--------HHHHHHCCCEEEEe--e
Confidence 8777777766553 5788888899999999889999999999999999665433 33455667666555 4
Q ss_pred cCCC-CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC-
Q 018401 172 LNES-TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE- 244 (356)
Q Consensus 172 ~~~~-~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~- 244 (356)
.+.+ ++.+|++++++++++ ++++|+++ |+| ||.+.+ +++|.++|++|+++||+|+++.--... +.....+.
T Consensus 261 ~~~~~~~~~d~~~l~~~~~~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~-~~~~~s~~~ 338 (517)
T PRK13355 261 CDEQSEWYPDIDDIRSKITS-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMD-GLEHTSIAS 338 (517)
T ss_pred cCcccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCC-CCCcccHHH
Confidence 4433 468999999999887 89999887 888 998877 778889999999999999997421111 11000100
Q ss_pred -Ccc---EEEeCCCCcC--CCCCceEEEEe
Q 018401 245 -YAD---VVTTTTHKSL--RGPRGAMIFFR 268 (356)
Q Consensus 245 -~~D---~~~~s~~K~l--~gp~gG~l~~~ 268 (356)
..| +.+.|++|.+ .|.+-|+++..
T Consensus 339 ~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~ 368 (517)
T PRK13355 339 LAPDLFCVTFSGLSKSHMIAGYRIGWMILS 368 (517)
T ss_pred hCCCCeEEEEecchhhccCcccceEEEEee
Confidence 012 3357889975 34444998864
No 85
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.82 E-value=8.1e-19 Score=166.07 Aligned_cols=235 Identities=18% Similarity=0.127 Sum_probs=152.9
Q ss_pred cCCeeecCCC---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHH
Q 018401 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~ 123 (356)
+.|+|..+.+ +.+|++++++.+++.. +..+++..+...+ ...+..++++.++++++.+ +. +++++|++++.
T Consensus 17 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g---~~~~~~~l~~~la~~~~~~-~~-i~~~~G~~~~~ 90 (360)
T TIGR00858 17 RLLNFSSNDYLGLASHPEVIQAAQQGAEQ-YGAGSTASRLVSG---NSPLHEELEEELAEWKGTE-AA-LLFSSGYLANV 90 (360)
T ss_pred eEEecccCCcccCCCCHHHHHHHHHHHHh-cCCCCCCcCcccC---CcHHHHHHHHHHHHHhCCC-CE-EEECchHHHHH
Confidence 4678877743 2468999999998865 3333332221111 2234455678888888853 33 44445566666
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc---CCcEEEEc-
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLIVAG- 199 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~---~~k~v~l~- 199 (356)
.++.+++++||+|++.+++|.++.. .+...|..+..+ + .+|++++++.+++. ++++|+++
T Consensus 91 ~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~--~------~~d~~~l~~~~~~~~~~~~~~v~~~~ 154 (360)
T TIGR00858 91 GVISALVGKGDLILSDALNHASLID--------GCRLSGARVRRY--R------HNDVEHLERLLEKNRGERRKLIVTDG 154 (360)
T ss_pred HHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCCceEEe--c------CCCHHHHHHHHHHcccCCCeEEEEeC
Confidence 6778889999999999877766543 233455555433 2 25889999988652 46777776
Q ss_pred CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCC--CCccEEEeCCCCcCCCCCceEEEEecCcc
Q 018401 200 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPF--EYADVVTTTTHKSLRGPRGAMIFFRKGVK 272 (356)
Q Consensus 200 ~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l--~~~D~~~~s~~K~l~gp~gG~l~~~~~~~ 272 (356)
+.| +|...++++|.++|+++|+++|+|++|+.|..+... ...++ .+.|+++.|++|+|+ +.||+++.++
T Consensus 155 ~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~gG~~~~~~--- 230 (360)
T TIGR00858 155 VFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALG-SYGAYVAGSQ--- 230 (360)
T ss_pred CccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhh-ccCcEEEcCH---
Confidence 444 788899999999999999999999999876543220 01111 147899999999874 4678888766
Q ss_pred hhccCCcchhhhHHHhhccccCCCCC-CCCcHHHHHHHHHHHHHHhc
Q 018401 273 EINKQGKEVFYDYEEKINQAVFPGLQ-GGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~-gt~~~~~~~al~~Al~~~~~ 318 (356)
++.+.+.....+... ++.+...++++.++++++..
T Consensus 231 -----------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 266 (360)
T TIGR00858 231 -----------ALIDYLINRARTLIFSTALPPAVAAAALAALELIQE 266 (360)
T ss_pred -----------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhh
Confidence 444444332222222 33445566777788877654
No 86
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.82 E-value=1.6e-18 Score=166.33 Aligned_cols=231 Identities=15% Similarity=0.114 Sum_probs=157.6
Q ss_pred hhhcccccccChHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHH
Q 018401 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (356)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (356)
|.|++++...+......+.+.....++.|+|..++++ +++.+.+++.+.+.... ..|....+..+++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia 77 (391)
T PRK07309 5 KRFNKQLDKIEVSLIRQFDQSISDIPGILKLTLGEPDFTTPDHVKEAAKRAIDANQ-------SHYTGMAGLLELRQAAA 77 (391)
T ss_pred hHHHhhhhhcCccHHHHHHHHHHhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHH
Confidence 4445555556655555555533222467888877664 46778888887765421 12333345678888888
Q ss_pred HHHHHHcCC--C-CCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 99 KRALEAFRL--D-PEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 99 ~~la~~~g~--~-~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
+++.+.+|. + ++++++++|+++++.+++.+++++||+|++.++.|.++.. .++..|.++..+ +.+..
T Consensus 78 ~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~~--~~~~~ 147 (391)
T PRK07309 78 DFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEP--------IVNLVGAEIVEI--DTTEN 147 (391)
T ss_pred HHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCEEEEE--ecCCc
Confidence 888887776 3 3577779999999988899999999999999976655432 344567666555 45433
Q ss_pred CCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC----
Q 018401 176 TGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE---- 244 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~--~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~---- 244 (356)
++.+|++.+++++.+ .++++|+++ |+| +|...+ +++|+++|++|++++|+|+++..-... +....++.
T Consensus 148 ~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~-~~~~~~~~~~~~ 226 (391)
T PRK07309 148 DFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYT-GEPHVSIAEYLP 226 (391)
T ss_pred CCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeC-CCCCCCHHHhcc
Confidence 457899999998864 257899888 888 897665 778889999999999999997532221 10111110
Q ss_pred CccEEEeCCCCcCCCC--CceEEEEec
Q 018401 245 YADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 245 ~~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
.-.+++.|++|.++.| +-|+++.++
T Consensus 227 ~~~i~~~S~SK~~g~~GlRvG~~v~~~ 253 (391)
T PRK07309 227 DQTILINGLSKSHAMTGWRIGLIFAPA 253 (391)
T ss_pred CCEEEEecChhhccCccceeEEEEeCH
Confidence 1238899999977433 339998877
No 87
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.82 E-value=3.1e-19 Score=167.63 Aligned_cols=193 Identities=18% Similarity=0.173 Sum_probs=132.5
Q ss_pred CCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC
Q 018401 54 SENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK 131 (356)
Q Consensus 54 ~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~ 131 (356)
++++ ++|.+++++.+.... . . .|+.. ...+++++++++++| +++++++++|++++..++.++++
T Consensus 4 ~~~~~~~~~~v~~a~~~~~~~-~--~-----~~~~~----~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~~ 69 (338)
T cd06502 4 SDTVTGPTPEMLEAMAAANVG-D--D-----VYGED----PTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHTQ 69 (338)
T ss_pred cccCCCCCHHHHHHHHhcccC-C--c-----ccCCC----HHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhcC
Confidence 4454 688999999876532 1 0 11111 234456689999999 44566788889999989999999
Q ss_pred CCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh------cCCcEEEEc-CCCCC
Q 018401 132 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL------FRPKLIVAG-ASAYA 204 (356)
Q Consensus 132 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~------~~~k~v~l~-~~n~g 204 (356)
+||+|++++++|.++..... ...+.|++++.+ +.+ .+.+|++++++++.+ .++++|+++ ++|+|
T Consensus 70 ~gd~v~~~~~~~~~~~~~~~-----~~~~~g~~~~~v--~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g 140 (338)
T cd06502 70 PGGSVICHETAHIYTDEAGA-----PEFLSGVKLLPV--PGE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGG 140 (338)
T ss_pred CCCeEEEecCcceeeecCCc-----HHHHcCceEEee--cCC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCc
Confidence 99999999988866542211 122356666555 443 267899999999864 268899888 77766
Q ss_pred C---cccHHHHHHHHHHcCCEEEEeccchhhhcc-cCCCCCCC-CCccEEEeCCCCcCCCCCceEEEEec
Q 018401 205 R---LYDYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 269 (356)
Q Consensus 205 ~---~~~l~~I~~la~~~g~~vivD~a~~~g~~~-~~~~~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~ 269 (356)
. ..++++|.++|+++|+++|+|+||..+... .+.....+ .++|+++.|+||+++.|.|++++.++
T Consensus 141 ~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~ 210 (338)
T cd06502 141 TVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNR 210 (338)
T ss_pred cccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCH
Confidence 3 456788999999999999999998644321 11110111 24899999999998777656555555
No 88
>PLN02368 alanine transaminase
Probab=99.82 E-value=2.2e-18 Score=165.36 Aligned_cols=174 Identities=16% Similarity=0.120 Sum_probs=123.6
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHHHHHHHHhhc-CCCCeeeecCCCCCcccCcccccccccccc
Q 018401 84 YGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPSNFQVYTALL-KPHDRIMALDLPHGGHLSHGYQTDTKKISA 160 (356)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a~~~~l~al~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 160 (356)
|+...+..++++++.+++.+.+|. ++++|++|+|+++++..++++++ +|||.|++++|.| ..+...+..
T Consensus 103 Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y--------~~y~~~~~~ 174 (407)
T PLN02368 103 YSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQY--------PLYSATISL 174 (407)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCC--------ccHHHHHHH
Confidence 444466778998999999888884 67788889999999988888887 7999999999555 444445566
Q ss_pred cceeeEEEecccCC-CCCCCCHHHHHHHhhhc-----CCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccc
Q 018401 161 VSIFFETMPYRLNE-STGYIDYDQLEKSATLF-----RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAH 229 (356)
Q Consensus 161 ~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~-----~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~ 229 (356)
.|+.++.+ +++. +++.+|+++|++++++. ++|+++++ |+| ||.+.+ +++|.++|++|+++||+|+++
T Consensus 175 ~g~~~v~v--~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y 252 (407)
T PLN02368 175 LGGTLVPY--YLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVY 252 (407)
T ss_pred cCCEEEEE--ecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 77666555 4442 34689999999988631 57877776 888 997776 567778899999999999997
Q ss_pred hhhhcccC-CCCC------CC----C--CccEEEeCCCCcCC---CCCceEEEE
Q 018401 230 ISGLVAAG-VIPS------PF----E--YADVVTTTTHKSLR---GPRGAMIFF 267 (356)
Q Consensus 230 ~~g~~~~~-~~~~------~l----~--~~D~~~~s~~K~l~---gp~gG~l~~ 267 (356)
.--..... .... .+ . .--+++.|++|.+. |-+.|+++.
T Consensus 253 ~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~ 306 (407)
T PLN02368 253 QQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEM 306 (407)
T ss_pred cccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEE
Confidence 43221110 0000 00 0 02377889999874 445599885
No 89
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.82 E-value=1.3e-18 Score=167.54 Aligned_cols=208 Identities=11% Similarity=0.056 Sum_probs=145.9
Q ss_pred cCCeeecCCC---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CC-CccccCCCchH
Q 018401 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DP-EKWGGSLSGSP 120 (356)
Q Consensus 47 ~~i~L~~~~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~-~~v~v~~sgs~ 120 (356)
+.++|..+.. ++++.+.+++.+.+......+| +...+..++++++++++++++|. ++ +++++++|+++
T Consensus 40 ~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y------~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~ 113 (405)
T PRK06207 40 RPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAY------TEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQG 113 (405)
T ss_pred CceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccC------CCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHH
Confidence 4577875443 3567889888887754211233 33345678999999999999995 56 77888999999
Q ss_pred HHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC--CCCCCCCHHHHHHHhhhcCCcEEEE
Q 018401 121 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN--ESTGYIDYDQLEKSATLFRPKLIVA 198 (356)
Q Consensus 121 a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~d~~~l~~~i~~~~~k~v~l 198 (356)
++..++.+++++||+|++.+++|..+. ..+...|.+++.++++.. .+++.+|+++|++++.+ ++++|++
T Consensus 114 al~~~~~~l~~~Gd~Vlv~~P~y~~~~--------~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~-~~k~v~l 184 (405)
T PRK06207 114 ALFLAVAATVARGDKVAIVQPDYFANR--------KLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA-GVRVFLF 184 (405)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCchhHH--------HHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh-cCeEEEE
Confidence 999899999999999999996665432 244456766655644311 12467999999999887 7898888
Q ss_pred c-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc----CCCCCCCC-CccEEEeCCCCcCC--CCCceEEE
Q 018401 199 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSPFE-YADVVTTTTHKSLR--GPRGAMIF 266 (356)
Q Consensus 199 ~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~~l~-~~D~~~~s~~K~l~--gp~gG~l~ 266 (356)
+ |+| ||.+.+ +++|+++|++||+++|+|++++.-.... .+...... .--+++.|++|.++ |.+.|+++
T Consensus 185 ~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii 264 (405)
T PRK06207 185 SNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAF 264 (405)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEE
Confidence 7 888 897776 6678888999999999999975321111 01111100 12288999999875 44459998
Q ss_pred Eec
Q 018401 267 FRK 269 (356)
Q Consensus 267 ~~~ 269 (356)
.++
T Consensus 265 ~~~ 267 (405)
T PRK06207 265 GSP 267 (405)
T ss_pred cCH
Confidence 766
No 90
>PRK07682 hypothetical protein; Validated
Probab=99.81 E-value=1.5e-18 Score=165.73 Aligned_cols=206 Identities=14% Similarity=0.074 Sum_probs=145.6
Q ss_pred HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCC-ccccCCCchH
Q 018401 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPE-KWGGSLSGSP 120 (356)
Q Consensus 46 ~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~-~v~v~~sgs~ 120 (356)
.+.|+|..++++ +++.+.+++.+.+.... .+| +...+..++++++.+++.+.+|. +++ ++++++|+++
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y------~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~ 92 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGY-TSY------TANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQ 92 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHH
Confidence 356899888775 46677888877765421 123 33355678888888999888776 454 6777999999
Q ss_pred HHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 018401 121 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG 199 (356)
Q Consensus 121 a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~l~ 199 (356)
++..++.++++|||+|++++++|..+. ..+...|..+..+ +.+. +++.+|++++++++.+ ++++++++
T Consensus 93 al~~~~~~l~~~gd~vl~~~p~y~~~~--------~~~~~~g~~~~~~--~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~ 161 (378)
T PRK07682 93 ALDVAMRAIINPGDEVLIVEPSFVSYA--------PLVTLAGGVPVPV--ATTLENEFKVQPAQIEAAITA-KTKAILLC 161 (378)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCchhhH--------HHHHHcCCEEEEe--ecCCccCCCCCHHHHHhhcCc-ccEEEEEE
Confidence 999899999999999999996665332 2344456555445 4432 3468999999999876 78998887
Q ss_pred -CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCC---CC-CCCCCccEEEeCCCCcCCCCC--ceEEEEe
Q 018401 200 -ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV---IP-SPFEYADVVTTTTHKSLRGPR--GAMIFFR 268 (356)
Q Consensus 200 -~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~---~~-~~l~~~D~~~~s~~K~l~gp~--gG~l~~~ 268 (356)
|+| +|.+.+ +++|.++|++|++++|+|+++......... .. .+...-.+++.|++|+|+.|. -|+++.+
T Consensus 162 ~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~ 241 (378)
T PRK07682 162 SPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP 241 (378)
T ss_pred CCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcC
Confidence 877 887665 778899999999999999997643321110 00 011124588999999875332 3999887
Q ss_pred c
Q 018401 269 K 269 (356)
Q Consensus 269 ~ 269 (356)
+
T Consensus 242 ~ 242 (378)
T PRK07682 242 V 242 (378)
T ss_pred H
Confidence 7
No 91
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.81 E-value=3.4e-18 Score=163.68 Aligned_cols=228 Identities=14% Similarity=0.089 Sum_probs=153.1
Q ss_pred ccccccChHHHHHHHHHHHHH----HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (356)
+++....++.+..+....+.. .+.++|..++++ +++.+.+++.+.+....... |+...+..+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------Y~~~~G~~~lr~aia 79 (385)
T PRK09276 6 DRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQ------YPSYEGMLEFRKAVA 79 (385)
T ss_pred hHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCC------CCCCCCcHHHHHHHH
Confidence 334455555555544433222 356888877764 57788999988775421112 333345678888888
Q ss_pred HHHHHHcCC--CCCc-cccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 99 KRALEAFRL--DPEK-WGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 99 ~~la~~~g~--~~~~-v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
+++.+.+|. ++++ +++|+|+++++..++.++++|||.|++++++|..+ ...+...|.+++.++ .+.+
T Consensus 80 ~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~--------~~~~~~~g~~~~~v~--~~~~ 149 (385)
T PRK09276 80 DWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVY--------KIGTIFAGGEPYFMP--LKEE 149 (385)
T ss_pred HHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcCh--------HHHHHHcCCEEEEEe--cCCC
Confidence 888887775 5553 55588888999888899999999999999655433 223445676666564 4423
Q ss_pred -CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcc----cCCCCC-CCC
Q 018401 176 -TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA----AGVIPS-PFE 244 (356)
Q Consensus 176 -~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~----~~~~~~-~l~ 244 (356)
++.+|++++++.+.+ ++++|+++ |+| ||.+.+ +++|+++|++|++++|+|+++...... ..+... +..
T Consensus 150 ~g~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 228 (385)
T PRK09276 150 NGFLPDLDAIPEDVAK-KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAK 228 (385)
T ss_pred CCCcCCHHHHHHhccc-cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCc
Confidence 456899999988876 89999998 888 897777 578888899999999999998532211 111111 111
Q ss_pred CccEEEeCCCCcCCCC--CceEEEEec
Q 018401 245 YADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 245 ~~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
...+++.|++|.++.| +-|+++.++
T Consensus 229 ~~~i~~~S~SK~~g~~GlRiG~~i~~~ 255 (385)
T PRK09276 229 DVGIEFHSLSKTYNMTGWRIGFAVGNA 255 (385)
T ss_pred CCEEEEecchhhcCCcchhheeeeCCH
Confidence 2457889999976333 239998766
No 92
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.81 E-value=5.1e-19 Score=166.36 Aligned_cols=211 Identities=20% Similarity=0.174 Sum_probs=146.4
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeee
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMA 138 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~ 138 (356)
+|.++++..+.+.. | + + ..++.+++++.+++++|++++++++++||++++..++.++++|||+|++
T Consensus 35 ~~~~~~~~~~~~~~-~--~--g---------~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli 100 (346)
T TIGR03576 35 GFKIDEEDLELLET-Y--V--G---------PAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVH 100 (346)
T ss_pred ChhHHHHHHHHHHH-h--c--C---------CHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEE
Confidence 78899998888765 3 1 1 1255567779999999998888888999999999999999999999997
Q ss_pred cCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCCc---ccHHHHHH
Q 018401 139 LDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYARL---YDYERIRK 214 (356)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n~g~~---~~l~~I~~ 214 (356)
+.++.+.+ ..+..++.+.|+++ + .. .|+++++. .+ ++++|+++ .+++|.+ .++++|++
T Consensus 101 ~~~d~p~~-----~s~~~~~~l~ga~~--~--~~------~~l~~l~~--~~-~~~lIiitg~s~~G~v~~~~~L~~i~~ 162 (346)
T TIGR03576 101 YLPEKPAH-----PSIPRSCKLAGAEY--F--ES------DELSELKK--ID-GTSLVVITGSTMDLKVVSEEDLKRVIK 162 (346)
T ss_pred CCCCCCCc-----hhHHHHHHHcCCEE--e--cc------CCHHHHhh--Cc-CceEEEEECCCCCCcccCHHHHHHHHH
Confidence 54333222 22222455666543 2 11 24555432 23 68888887 4447866 68999999
Q ss_pred HHHHcCCEEEEeccchhhhccc-CCCCCCCCCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHhhcccc
Q 018401 215 VCNKQKAIMLADMAHISGLVAA-GVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV 293 (356)
Q Consensus 215 la~~~g~~vivD~a~~~g~~~~-~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 293 (356)
+|+++|+++++|+||+.|.... +....--.++|+++.|++|++.|+++|+++.++ ++.+.+....
T Consensus 163 la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~r~G~v~~~~--------------~li~~l~~~~ 228 (346)
T TIGR03576 163 QAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGPRGGLLAGRK--------------ELVDKIKSVG 228 (346)
T ss_pred HHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhccccceEEEEeCH--------------HHHHHHHHhh
Confidence 9999999999999998775321 110000013799999999999899999999887 5666665543
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHH
Q 018401 294 FPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 294 ~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
.+..+ +.+.+..++..+||+.+
T Consensus 229 ~~~~~-s~~~~~~~aa~~aL~~~ 250 (346)
T TIGR03576 229 EQFGL-EAQAPLLAAVVRALEEF 250 (346)
T ss_pred cCccc-CccHHHHHHHHHHHhhc
Confidence 34333 34556667777888654
No 93
>PRK07777 aminotransferase; Validated
Probab=99.81 E-value=2.6e-18 Score=164.65 Aligned_cols=227 Identities=10% Similarity=0.075 Sum_probs=154.4
Q ss_pred cccccChHHHHHHHHHHHHHHcCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHH
Q 018401 26 PLEVVDPEIADIIEHEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (356)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~ 103 (356)
++..+.+.++..+....+ ..+.++|..+.. ..++.+.+++.+.+.... ..|+...+..++++++.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~ 76 (387)
T PRK07777 5 RLRPFGTTIFAEMSALAV-RTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-------NQYPPGPGIPELRAAIAAQRRR 76 (387)
T ss_pred hhhhcCccHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHHHH
Confidence 345566666666666543 346788876554 346677887777665421 1233335567888888888888
Q ss_pred HcCCC--CC-ccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCC
Q 018401 104 AFRLD--PE-KWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 180 (356)
Q Consensus 104 ~~g~~--~~-~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 180 (356)
.+|.+ ++ ++++|+|+++++.+++.+++++||+|++..+.|.++. ..+...|..++.+++..+..++.+|
T Consensus 77 ~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~--------~~~~~~g~~~~~~~~~~~~~~~~~d 148 (387)
T PRK07777 77 RYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYA--------AVIAMAGAHRVPVPLVPDGRGFALD 148 (387)
T ss_pred HhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH--------HHHHHCCCEEEEeecCCccCCCcCC
Confidence 88874 44 5777999999999888999999999999996665442 2334556656555432221235789
Q ss_pred HHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc----CCCCC-CCCCccEEE
Q 018401 181 YDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPS-PFEYADVVT 250 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~-~l~~~D~~~ 250 (356)
++++++++.+ ++++|+++ ++| +|...+ +++|.++|+++++++|+|+++....... .+... +..+.++++
T Consensus 149 ~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~ 227 (387)
T PRK07777 149 LDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTI 227 (387)
T ss_pred HHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEE
Confidence 9999998876 78999987 777 886654 7888999999999999999975322111 11111 112367999
Q ss_pred eCCCCcCCCC--CceEEEEec
Q 018401 251 TTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 251 ~s~~K~l~gp--~gG~l~~~~ 269 (356)
.|++|.|+.| +-|+++.++
T Consensus 228 ~S~SK~~g~~GlRiG~~~~~~ 248 (387)
T PRK07777 228 SSAAKTFNVTGWKIGWACGPA 248 (387)
T ss_pred eechhhccCcCceeEEEecCH
Confidence 9999988534 228888766
No 94
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.81 E-value=1.1e-18 Score=166.78 Aligned_cols=185 Identities=19% Similarity=0.194 Sum_probs=135.0
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCCCee
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPHDRI 136 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~gd~V 136 (356)
.+++.++++.+.+.+.+ + ....... .+++.+++++|++.. ++++||++++..++.++ +++||+|
T Consensus 8 ~~~~~~~~v~~~~~~~~---~------~~g~~~~----~le~~la~~~g~~~~--v~~~sgt~al~~~l~al~~~~Gd~V 72 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDF---L------TQGPTVP----AFEEALAEYVGAKYA--VAFNSATSALHIACLALGVGPGDRV 72 (380)
T ss_pred CCHHHHHHHHHHHhcCC---c------cCChhHH----HHHHHHHHHHCCCeE--EEEcCHHHHHHHHHHHcCCCCCCEE
Confidence 45666788877776522 1 1112233 455888999998643 44668899998888888 8999999
Q ss_pred eecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhh----hcCCcEEEEcCCCCCCcccHHHH
Q 018401 137 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT----LFRPKLIVAGASAYARLYDYERI 212 (356)
Q Consensus 137 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~----~~~~k~v~l~~~n~g~~~~l~~I 212 (356)
++++++|.+... .+...|++++.+ +++++++.+|+++++++++ + ++++|+++. .+|...++++|
T Consensus 73 iv~~~~~~~~~~--------~~~~~G~~~~~~--~~~~~~~~~d~~~l~~~i~~~~~~-~t~~v~~~~-~~G~~~~~~~i 140 (380)
T TIGR03588 73 WTTPITFVATAN--------CALYCGAKVDFV--DIDPDTGNIDEDALEKKLAAAKGK-LPKAIVPVD-FAGKSVDMQAI 140 (380)
T ss_pred EeCCcchHHHHH--------HHHHcCCEEEEE--ecCCCcCCcCHHHHHHHhhcccCC-CceEEEEeC-CCCccCCHHHH
Confidence 999987765532 334567666555 5554567899999999998 4 788887642 27888999999
Q ss_pred HHHHHHcCCEEEEeccchhhhcccCCCCCCC-CCccEEEeCCC--CcCCCCCceEEEEecC
Q 018401 213 RKVCNKQKAIMLADMAHISGLVAAGVIPSPF-EYADVVTTTTH--KSLRGPRGAMIFFRKG 270 (356)
Q Consensus 213 ~~la~~~g~~vivD~a~~~g~~~~~~~~~~l-~~~D~~~~s~~--K~l~gp~gG~l~~~~~ 270 (356)
.++|+++|+++|+|++|++|.. .+....+. ...|+.++|+| |++.++.||+++++++
T Consensus 141 ~~l~~~~~~~lI~D~a~a~g~~-~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~ 200 (380)
T TIGR03588 141 AALAKKHGLKIIEDASHALGAE-YGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDE 200 (380)
T ss_pred HHHHHHcCCEEEEECCCcccCc-cCCEeCCCccccceEEEecCCCCcccccCceEEEECCH
Confidence 9999999999999999999865 23233331 12499999988 8998888888888764
No 95
>PRK07337 aminotransferase; Validated
Probab=99.81 E-value=1.5e-18 Score=166.24 Aligned_cols=225 Identities=12% Similarity=0.059 Sum_probs=152.5
Q ss_pred cccccChHHHHHHHHHHHH----HHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHH
Q 018401 26 PLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (356)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (356)
++..+.+..+..+.+.... +.+.++|..+++. +++.+.+++.+.+.... ..| +...+..++++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y------~~~~g~~~lr~~ia~ 78 (388)
T PRK07337 6 RVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGV-TQY------TSALGLAPLREAIAA 78 (388)
T ss_pred HhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCCCHHHHHHHHH
Confidence 3444445555544443332 2356888877664 47788999888775421 122 333456788888888
Q ss_pred HHHHHcCC--CCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CC
Q 018401 100 RALEAFRL--DPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-ST 176 (356)
Q Consensus 100 ~la~~~g~--~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~ 176 (356)
++.+.+|+ +++++++|+|+++++..++.+++++||+|++++++|.++.. .+...|++++.+ +.+. ++
T Consensus 79 ~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~~--~~~~~~~ 148 (388)
T PRK07337 79 WYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRH--------FVAAAEGRPVLV--PSGPAER 148 (388)
T ss_pred HHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEe--ecCCccC
Confidence 88877775 77788889999999988888899999999999987765532 233446556555 4442 34
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC-Ccc-EE
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YAD-VV 249 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~-~~D-~~ 249 (356)
+.+|++++++.+.+ ++++|+++ |+| ||.+.+ +++|+++|+++++++|+|+++.. ....+.....+. +.+ ++
T Consensus 149 ~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~vi~ 226 (388)
T PRK07337 149 FQLTAADVEAAWGE-RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQG-LSYDAAPVSALSLGDDVIT 226 (388)
T ss_pred CcCCHHHHHhhcCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccc-cccCCCCcChhhccCCEEE
Confidence 68999999999886 78988887 888 897665 67888899999999999998642 111110000001 123 45
Q ss_pred EeCCCCcCC--CCCceEEEEec
Q 018401 250 TTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 250 ~~s~~K~l~--gp~gG~l~~~~ 269 (356)
+.|.+|.++ |.+.|+++.++
T Consensus 227 ~~S~SK~~~~~G~RiG~~~~~~ 248 (388)
T PRK07337 227 INSFSKYFNMTGWRLGWLVVPE 248 (388)
T ss_pred EEechhhcCCchhheeeeecCH
Confidence 779999874 33449998876
No 96
>PRK07550 hypothetical protein; Provisional
Probab=99.81 E-value=3.1e-18 Score=164.01 Aligned_cols=205 Identities=13% Similarity=0.059 Sum_probs=143.9
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPSN 122 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a~ 122 (356)
..++|..++++ +++.+.+++.+.+..... ..|+...+..++++++++++.+.+|. +++++++|+|+++++
T Consensus 30 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 103 (386)
T PRK07550 30 PLIDLSQAVPGYPPPPELLRALAEAAADPAA------HLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAF 103 (386)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCC------cCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 46888877764 467788888776643111 12333355678888888999888785 677888898888898
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
..++.+++++||+|+++.+.|..+.. .+...|.+++.+ +.+. .++.+|++++++++++ ++++|+++ |
T Consensus 104 ~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v--~~~~~~~~~~~~~~l~~~~~~-~~~~v~~~~P 172 (386)
T PRK07550 104 WAAMVTLAGAGDEVILPLPWYFNHKM--------WLDMLGIRPVYL--PCDEGPGLLPDPAAAEALITP-RTRAIALVTP 172 (386)
T ss_pred HHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCCEEEEE--ecCCCcCCCCCHHHHHHHhcc-cCcEEEEeCC
Confidence 88888999999999999976654432 334567666555 4542 3457899999999987 78888776 8
Q ss_pred CC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCC------CCccEEEeCCCCcCC--CCCceEEEEe
Q 018401 201 SA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF------EYADVVTTTTHKSLR--GPRGAMIFFR 268 (356)
Q Consensus 201 ~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l------~~~D~~~~s~~K~l~--gp~gG~l~~~ 268 (356)
+| +|.+.+ +++|+++|+++|+++|+|++++.- ........++ ..-.+++.|++|.++ |.+.|+++.+
T Consensus 173 ~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~ 251 (386)
T PRK07550 173 NNPTGVVYPPELLHELYDLARRHGIALILDETYRDF-DSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVAS 251 (386)
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhh-ccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecC
Confidence 78 887665 778999999999999999997522 1111000000 112467899999875 4444998887
Q ss_pred c
Q 018401 269 K 269 (356)
Q Consensus 269 ~ 269 (356)
+
T Consensus 252 ~ 252 (386)
T PRK07550 252 P 252 (386)
T ss_pred H
Confidence 6
No 97
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.81 E-value=3.3e-19 Score=169.21 Aligned_cols=183 Identities=21% Similarity=0.207 Sum_probs=128.6
Q ss_pred HHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCCCeeee
Q 018401 60 VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPHDRIMA 138 (356)
Q Consensus 60 ~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~gd~Vl~ 138 (356)
.+.++++.+.+.+.+. . .......++| +.+++++|.+.. +.++|||.|+.+++.++ +++||+|++
T Consensus 5 ~e~~~~v~~~l~s~~~----~----~~g~~~~~fE----~~~a~~~g~~~~--~~~~sgt~Al~~al~~l~~~~gdeVi~ 70 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWL----S----TYGPYVEEFE----KEFAEYFGVKYA--VAVSSGTSALHLALRALGLGPGDEVIV 70 (363)
T ss_dssp HHHHHHHHHHHHHTCC----S----SSSHHHHHHH----HHHHHHHTSSEE--EEESSHHHHHHHHHHHTTGGTTSEEEE
T ss_pred HHHHHHHHHHHHhCCc----c----CCCHHHHHHH----HHHHHHhCCCeE--EEeCChhHHHHHHHHhcCCCcCceEec
Confidence 4567777777776431 1 1023455555 888999997653 45999999999999998 899999999
Q ss_pred cCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHH
Q 018401 139 LDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNK 218 (356)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~ 218 (356)
+..++.+... .+...|.++ |.++++++++.+|++++++++++ ++|+|++. +..|...++++|.++|++
T Consensus 71 p~~t~~~~~~--------ai~~~G~~p--v~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~-h~~G~~~d~~~i~~~~~~ 138 (363)
T PF01041_consen 71 PAYTFPATAS--------AILWAGAEP--VFVDIDPETLNIDPEALEKAITP-KTKAILVV-HLFGNPADMDAIRAIARK 138 (363)
T ss_dssp ESSS-THHHH--------HHHHTT-EE--EEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE--GGGB---HHHHHHHHHH
T ss_pred CCCcchHHHH--------HHHHhccEE--EEEeccCCcCCcCHHHHHHHhcc-CccEEEEe-cCCCCcccHHHHHHHHHH
Confidence 9988877765 344567555 55588878899999999999998 89988874 336878899999999999
Q ss_pred cCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC--CCcCCCCCceEEEEecC
Q 018401 219 QKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT--HKSLRGPRGAMIFFRKG 270 (356)
Q Consensus 219 ~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~--~K~l~gp~gG~l~~~~~ 270 (356)
+|++||.|+||+.|....+.....+ .|+.++|+ .|.+.+..||+++++++
T Consensus 139 ~~i~lIeD~a~a~g~~~~g~~~G~~--gd~~~fSf~~~K~i~~geGG~v~~~~~ 190 (363)
T PF01041_consen 139 HGIPLIEDAAQAFGARYKGRPVGSF--GDIAIFSFHPTKIITTGEGGAVVTNDP 190 (363)
T ss_dssp TT-EEEEE-TTTTT-EETTEETTSS--SSEEEEESSTTSSS-SSS-EEEEESTH
T ss_pred cCCcEEEccccccCceeCCEeccCC--CCceEecCCCCCCCcCCCCeeEEecHH
Confidence 9999999999999986544322222 36555554 69898888899999885
No 98
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.81 E-value=3.5e-18 Score=168.03 Aligned_cols=195 Identities=15% Similarity=0.104 Sum_probs=135.8
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHHHHHHHHhhc-CCCCe
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPSNFQVYTALL-KPHDR 135 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a~~~~l~al~-~~gd~ 135 (356)
|..+++++.+++.... .....|+...+..++++++.+++.+..|. ++++|++|+|+++++..++++++ +|||.
T Consensus 90 P~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~ 165 (481)
T PTZ00377 90 PADVVARAKEYLNAIG----GGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDG 165 (481)
T ss_pred CHHHHHHHHHHHHhCC----CcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCE
Confidence 4577888776555411 11123455567788998898998887775 67788889999999998999998 79999
Q ss_pred eeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhc-----CCcEEEEc-CCC-CCCcc
Q 018401 136 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLF-----RPKLIVAG-ASA-YARLY 207 (356)
Q Consensus 136 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~-----~~k~v~l~-~~n-~g~~~ 207 (356)
|+++.|.|..+ ...+...|..++.+ +++. +++.+|+++|++++++. ++|+++++ |+| ||.+.
T Consensus 166 Vlv~~P~y~~y--------~~~~~~~g~~~v~v--~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~ 235 (481)
T PTZ00377 166 VMIPIPQYPLY--------SAAITLLGGKQVPY--YLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVL 235 (481)
T ss_pred EEECCCCchhH--------HHHHHHcCCEEEEE--EeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCC
Confidence 99999555433 33556677777555 4443 34689999999998642 68887776 888 99887
Q ss_pred c---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCC-------CCCC------ccEEEeCCCCcCC---CCCceEEEE
Q 018401 208 D---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-------PFEY------ADVVTTTTHKSLR---GPRGAMIFF 267 (356)
Q Consensus 208 ~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~-------~l~~------~D~~~~s~~K~l~---gp~gG~l~~ 267 (356)
+ +++|+++|++|+++||+|+++.--....+.... .+.. --+++.|.+|.+. |-+.|++++
T Consensus 236 s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~ 314 (481)
T PTZ00377 236 TRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFEL 314 (481)
T ss_pred CHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEE
Confidence 7 778889999999999999997532111110000 0110 1267789999764 445599886
No 99
>PLN02452 phosphoserine transaminase
Probab=99.81 E-value=6e-19 Score=166.25 Aligned_cols=267 Identities=12% Similarity=0.041 Sum_probs=170.1
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC-cccc-CCCchHHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE-KWGG-SLSGSPSNFQV 125 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~-~v~v-~~sgs~a~~~~ 125 (356)
.+++++++..+|++|++++.+.+.+....|..-...........++.+.+++.++++++++.+ ++++ .+|||.++.++
T Consensus 8 ~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~ 87 (365)
T PLN02452 8 VFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAI 87 (365)
T ss_pred eEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHH
Confidence 578999999999999999999875522112111111111233556777899999999998533 5666 89999999999
Q ss_pred HHhhcCCCCeeeecCCCCCcccCccccccc--ccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-
Q 018401 126 YTALLKPHDRIMALDLPHGGHLSHGYQTDT--KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA- 202 (356)
Q Consensus 126 l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n- 202 (356)
+..++.+||++++.. .+.+..+ ..++..|...+....+.......+++++++. .+ +.+.|.++.++
T Consensus 88 ~~nl~~~~~~~l~~~--------~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~v~~~hnET 156 (365)
T PLN02452 88 PLNLCKPGDKADFVV--------TGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--TP-DAKFVHICANET 156 (365)
T ss_pred HHhcCCCCCeEEEEE--------CCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC--CC-CCcEEEECCCCC
Confidence 999999999998776 2222211 1233334322222101110111456666521 22 57788777444
Q ss_pred -CCCc-ccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCc
Q 018401 203 -YARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGK 279 (356)
Q Consensus 203 -~g~~-~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~ 279 (356)
+|.. .|++++. ++++++|+++++|..++++..++ +|+ +|+||++ ||+| |++++++++........
T Consensus 157 stGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~---v~~--~saqK~l-GP~Gl~~v~vr~~~l~~~~~~~ 224 (365)
T PLN02452 157 IHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYG---VIY--AGAQKNV-GPSGVTIVIIRKDLIGNARPIT 224 (365)
T ss_pred CCcEecCcccccC------CCeEEEECCccccCcccCHHHcC---EEE--Eeccccc-CCCCeEEEEEcHHHHhhcccCC
Confidence 6874 7777764 38999999999999999988766 555 6999987 7999 99999986532211111
Q ss_pred chhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhh
Q 018401 280 EVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQ 340 (356)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (356)
+...++....+. ...++||++..++++..+|+++.++.+++.+.++...+...+..+.
T Consensus 225 ~~~~~~~~~~~~---~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l 282 (365)
T PLN02452 225 PGMLDYKIHAEN---DSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAI 282 (365)
T ss_pred CchhhHHHHHhc---CCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 111122211111 1334899999999999999999886566665555444443333333
No 100
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.81 E-value=3.9e-18 Score=163.71 Aligned_cols=228 Identities=14% Similarity=0.084 Sum_probs=155.0
Q ss_pred cccccccChHHHHHHHHHHHH----HHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHH
Q 018401 24 NAPLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (356)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 97 (356)
++++..+++..+..+....+. ....++|..+++. +++.+.+++.+.+.+.. .. |+...+...+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~------Y~~~~g~~~lr~~i 77 (393)
T PRK05764 5 SKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGK-TK------YTPAAGIPELREAI 77 (393)
T ss_pred hhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CC------cCCCCChHHHHHHH
Confidence 455555566665544443322 2356788766664 46888899888776421 12 33335567788788
Q ss_pred HHHHHHHcCC--CCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-
Q 018401 98 QKRALEAFRL--DPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE- 174 (356)
Q Consensus 98 ~~~la~~~g~--~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~- 174 (356)
++++.+.+|. +++++++++|+++++..++.+++++||.|++++++|..+.. .+...|.++..++ .+.
T Consensus 78 a~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~~~~ 147 (393)
T PRK05764 78 AAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPE--------MVKLAGGVPVFVP--TGEE 147 (393)
T ss_pred HHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHH--------HHHHcCCEEEEEe--cCcc
Confidence 8888777664 67788889999999988889999999999999976654422 3345576665564 442
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc----CCCCC--CC
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPS--PF 243 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~--~l 243 (356)
+++.+|++++++++.+ ++++|+++ ++| +|.+.+ +++|.++|++||+++++|++++...... ..... ..
T Consensus 148 ~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 226 (393)
T PRK05764 148 NGFKLTVEQLEAAITP-KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPEL 226 (393)
T ss_pred cCCcCCHHHHHHhhCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCC
Confidence 3457899999999876 78998887 777 887654 7788999999999999999975322110 01000 11
Q ss_pred CCccEEEeCCCCcCCCCC--ceEEEEec
Q 018401 244 EYADVVTTTTHKSLRGPR--GAMIFFRK 269 (356)
Q Consensus 244 ~~~D~~~~s~~K~l~gp~--gG~l~~~~ 269 (356)
.+.++++.|++|+++.|. .|+++.++
T Consensus 227 ~~~~i~~~s~SK~~~~~G~RiG~i~~~~ 254 (393)
T PRK05764 227 RDRTITVNGFSKAYAMTGWRLGYAAGPK 254 (393)
T ss_pred cCCEEEEecCcccccCccceeEEEecCH
Confidence 135789999999874332 38888665
No 101
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.81 E-value=1.7e-19 Score=169.94 Aligned_cols=173 Identities=18% Similarity=0.114 Sum_probs=130.8
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCC--CCccccCCCchHHHHHHHHhhcC------------CC--CeeeecCCCCCcccC
Q 018401 85 GGNEYIDMAESLCQKRALEAFRLD--PEKWGGSLSGSPSNFQVYTALLK------------PH--DRIMALDLPHGGHLS 148 (356)
Q Consensus 85 ~~~~~~~~l~~~~~~~la~~~g~~--~~~v~v~~sgs~a~~~~l~al~~------------~g--d~Vl~~~~~~~~~~~ 148 (356)
.......++++++++++++++|++ ++++++|+||++++..++.++.. ++ +.|++++++|.++..
T Consensus 31 ~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~ 110 (345)
T cd06450 31 DESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEK 110 (345)
T ss_pred ccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHH
Confidence 333557789999999999999995 34677799999998888877632 33 478888888876543
Q ss_pred cccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc-CCC-CCCcccHHHHHHHHHHcCC
Q 018401 149 HGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG-ASA-YARLYDYERIRKVCNKQKA 221 (356)
Q Consensus 149 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~-----~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~ 221 (356)
.+...|.+++.+ +.+ +++.+|+++|++++.+. ++++|+++ ++| +|.+.|+++|+++|+++|+
T Consensus 111 --------~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~ 179 (345)
T cd06450 111 --------AAAYLDVKVRLV--PVD-EDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDL 179 (345)
T ss_pred --------HHHHHhcCeEEe--eeC-CCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCC
Confidence 223446666556 444 34589999999998651 56777777 666 8999999999999999999
Q ss_pred EEEEeccchhhhcccCCCC---CCCCCccEEEeCCCCcCCCCCc-eEEEEe
Q 018401 222 IMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFR 268 (356)
Q Consensus 222 ~vivD~a~~~g~~~~~~~~---~~l~~~D~~~~s~~K~l~gp~g-G~l~~~ 268 (356)
++++|++|+.+..+..... ..+.++|++++|+|||+++|.| |+++++
T Consensus 180 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~ 230 (345)
T cd06450 180 WLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR 230 (345)
T ss_pred eEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH
Confidence 9999999998876543222 1223589999999999999988 877665
No 102
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.80 E-value=2.7e-18 Score=164.33 Aligned_cols=190 Identities=16% Similarity=0.129 Sum_probs=129.8
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCcc-CCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeee
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIM 137 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl 137 (356)
+|++++++.++++. |..++.+++. |+......+ +++.+++++|.+.. ++.++|+.++..++.+++++||.|+
T Consensus 14 ~~~~~~~~~~a~~~-~g~~~~~sr~~yg~~~~~~~----LE~~lA~~~g~e~a--l~~~sG~~a~~~~i~~l~~~GD~Vl 86 (392)
T PLN03227 14 SPTLRQTALESLSH-YGCGSCGPRGFYGTIDAHLE----LEQCMAEFLGTESA--ILYSDGASTTSSTVAAFAKRGDLLV 86 (392)
T ss_pred CHHHHHHHHHHHHH-hCCCCcccccccCChHHHHH----HHHHHHHHhCCCcE--EEecCcHHHHHHHHHHhCCCCCEEE
Confidence 78999999999876 5555555544 333333444 44899999998754 4566777777778889999999999
Q ss_pred ecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh----------cCCcEEEEc-CCC-CCC
Q 018401 138 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL----------FRPKLIVAG-ASA-YAR 205 (356)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~----------~~~k~v~l~-~~n-~g~ 205 (356)
+++..|++... ++.+.+..++.+ +.. ..-|++.+.+.+.+ .++++|++. +.| +|.
T Consensus 87 ~~~~~h~s~~~--------~~~l~~~~~~~~--~~~---d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~ 153 (392)
T PLN03227 87 VDRGVNEALLV--------GVSLSRANVRWF--RHN---DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGT 153 (392)
T ss_pred EeccccHHHHH--------HHHHcCCeEEEe--CCC---CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCc
Confidence 99988877643 233344333323 332 11133443334431 157788887 445 789
Q ss_pred cccHHHHHHHHHHcCCEEEEeccchhhhccc---CC-CC---CCCCCccEEEeCCCCcCCCCCceEEEEec
Q 018401 206 LYDYERIRKVCNKQKAIMLADMAHISGLVAA---GV-IP---SPFEYADVVTTTTHKSLRGPRGAMIFFRK 269 (356)
Q Consensus 206 ~~~l~~I~~la~~~g~~vivD~a~~~g~~~~---~~-~~---~~l~~~D~~~~s~~K~l~gp~gG~l~~~~ 269 (356)
+.|+++|.++|++||+++|+|++|++|.... .. .. .+..++|++++|.+|++ ||.||+++.++
T Consensus 154 i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~gg~v~~~~ 223 (392)
T PLN03227 154 LAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSVGGMTVGSE 223 (392)
T ss_pred ccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hccCcEEecCH
Confidence 9999999999999999999999998665421 00 00 12235899999999975 68888888776
No 103
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.80 E-value=1.9e-18 Score=165.29 Aligned_cols=236 Identities=17% Similarity=0.143 Sum_probs=155.2
Q ss_pred HcCCeeecCC--CC-CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHH
Q 018401 46 WKGLELIPSE--NF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 46 ~~~i~L~~~~--~~-~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~ 122 (356)
++.|+|..+. .. .+|.+++++.+.+.. +...+.. |....+..++++++++++++++|.+. . ++.++|++++
T Consensus 33 ~~~id~~~~~~~g~~~~~~~~~a~~~~~~~-~~~~~~~---~~~~~g~~~l~~~l~~~l~~~~g~~~-~-i~~~sG~~a~ 106 (385)
T TIGR01825 33 KEVINLSSNNYLGFADHPRLKEAAAQAIQQ-YGVGAGA---VRTIAGTLRLHEELEEKLAKFKKTEA-A-LVFQSGFNTN 106 (385)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHH-cCCCCCc---cCcccCCcHHHHHHHHHHHHHhCCCc-E-EEECcHHHHH
Confidence 3568887654 23 688999999888764 2111111 11223346777888899999999753 3 4444557777
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc---CCcEEEEc
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLIVAG 199 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~---~~k~v~l~ 199 (356)
..++.+++++||.|++.++.|.++.. .+.+.|.....+ ..+|++++++.+.+. ++++|+++
T Consensus 107 ~~a~~~~~~~gd~vi~~~~~~~~~~~--------~~~~~g~~~~~~--------~~~d~~~l~~~l~~~~~~~~~~v~~~ 170 (385)
T TIGR01825 107 QGVLSALLRKGDIVLSDELNHASIID--------GLRLTKATKKIY--------KHADMDDLDRVLRENPSYGKKLIVTD 170 (385)
T ss_pred HHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCCceEEe--------CCCCHHHHHHHHHhhccCCCeEEEEe
Confidence 77888889999999999887766543 223344333222 146788888877642 57788776
Q ss_pred -CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCC-CCccEEEeCCCCcCCCCCceEEEEecCcc
Q 018401 200 -ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVK 272 (356)
Q Consensus 200 -~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~ 272 (356)
..| +|.+.|+++|.++|++||+++|+|++|+.|..+..- ...++ .+.|+++.|++|+++ +.||+++.++
T Consensus 171 ~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~gG~~~~~~--- 246 (385)
T TIGR01825 171 GVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIG-VVGGYAAGHK--- 246 (385)
T ss_pred cCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhh-cCCCEEecCH---
Confidence 344 899999999999999999999999999776543110 00111 247899999999884 4568877665
Q ss_pred hhccCCcchhhhHHHhhccccCCCCCC-CCcHHHHHHHHHHHHHHhc
Q 018401 273 EINKQGKEVFYDYEEKINQAVFPGLQG-GPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~g-t~~~~~~~al~~Al~~~~~ 318 (356)
++.+.+.....+...+ +.+.+..+++.+|++.+.+
T Consensus 247 -----------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 282 (385)
T TIGR01825 247 -----------ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR 282 (385)
T ss_pred -----------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc
Confidence 4444443322222233 3455667788888887654
No 104
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.80 E-value=1.1e-17 Score=161.27 Aligned_cols=205 Identities=14% Similarity=0.097 Sum_probs=144.7
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC---CCC-ccccCCCchH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL---DPE-KWGGSLSGSP 120 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~---~~~-~v~v~~sgs~ 120 (356)
..++|..++++ +++.+.+++.+.+......+| +. .+...+++++++++.+.+|. +++ +|++|+|+++
T Consensus 45 ~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y------~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~ 117 (410)
T PRK06290 45 ELIDMGVGEPDEMADESVVEVLCEEAKKPENRGY------AD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKP 117 (410)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCC------CC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHH
Confidence 36889888775 577888888876543211122 21 44678888888888887774 465 6777888889
Q ss_pred HHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 018401 121 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TGYIDYDQLEKSATLFRPKLIVAG 199 (356)
Q Consensus 121 a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~i~~~~~k~v~l~ 199 (356)
++..++.+++++||.|+++.|.|..+ ...+...|.++..+ +.+.+ ++.+|++++++++.+ ++++|+++
T Consensus 118 al~~~~~~~~~~gd~Vlv~~P~y~~~--------~~~~~~~g~~v~~v--~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~ 186 (410)
T PRK06290 118 ALAMLPSCFINPGDVTLMTVPGYPVT--------GTHTKYYGGEVYNL--PLLEENNFLPDLDSIPKDIKE-KAKLLYLN 186 (410)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCccH--------HHHHHHcCCEEEEE--ecCCCcCCcCCHHHHHHhhcc-cceEEEEE
Confidence 99888999999999999999655433 32445567666556 45433 457899999998876 89999998
Q ss_pred -CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCC-CCCCC---CCccEEEeCCCCcCCCC--CceEEEEe
Q 018401 200 -ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSPF---EYADVVTTTTHKSLRGP--RGAMIFFR 268 (356)
Q Consensus 200 -~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~-~~~~l---~~~D~~~~s~~K~l~gp--~gG~l~~~ 268 (356)
|+| ||.+.+ +++|.++|++|+++||+|+++......... ....+ ...++++.|.+|.++.| +-|+++.+
T Consensus 187 nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~ 266 (410)
T PRK06290 187 YPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN 266 (410)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeC
Confidence 888 998877 567788899999999999998643221110 10011 13569999999987433 33999876
Q ss_pred c
Q 018401 269 K 269 (356)
Q Consensus 269 ~ 269 (356)
+
T Consensus 267 ~ 267 (410)
T PRK06290 267 E 267 (410)
T ss_pred H
Confidence 6
No 105
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.80 E-value=3.5e-18 Score=167.60 Aligned_cols=197 Identities=13% Similarity=0.123 Sum_probs=138.2
Q ss_pred cCCCCCcHHHHHHHHhhhhccCCCCCCCCccC---CCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHH---H
Q 018401 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYY---GGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQV---Y 126 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~---l 126 (356)
.....+||.+.+++.+... +. +| +.| ...++..++..++++++++++|++... +..++|+.+.... +
T Consensus 77 ~~~~~~~p~i~~~~~~~~~--~~-~~---tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~-l~~~~GA~a~~~~l~~~ 149 (481)
T PRK04366 77 SCTMKYNPKINEKVARLPG--FA-EL---HPLQPEETVQGALELMYELQEWLKEITGMDAVT-LQPAAGAHGELTGLLMI 149 (481)
T ss_pred ccCCCCCHHHHHHHHhCcc--hh-cC---CCCCChhhhhHHHHHHHHHHHHHHHHhCCCceE-EEeCcHHHHHHHHHHHH
Confidence 3444678999998887421 11 22 112 234556788889999999999997432 2345555333221 2
Q ss_pred H-hhcCCCC----eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 127 T-ALLKPHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 127 ~-al~~~gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
. .++++|| +|++++++|+++.. .+...|++++.++ .+ .++.+|+++|++++.+ ++++|+++ +
T Consensus 150 r~~~~~~Gd~~~~~Vlv~~~~hp~~~~--------~~~~~G~~vv~v~--~~-~~~~~D~e~L~~~i~~-~t~~V~v~~P 217 (481)
T PRK04366 150 RAYHEARGDTKRTEVIVPDSAHGTNPA--------SAAMAGFKVVEIP--SN-EDGLVDLEALKAAVGE-DTAALMLTNP 217 (481)
T ss_pred HHHhhccCcCCCCEEEEcCCccHhHHH--------HHHHcCCEEEEee--cC-CCCCcCHHHHHhhccc-CCeEEEEeCC
Confidence 3 2367776 99999988877764 2345677776664 44 4578999999999987 89999888 4
Q ss_pred CCCCCc-ccHHHHHHHHHHcCCEEEEeccchhhhcc-cCCCCCCCCCccEEEeCCCCcCCCCC-----c-eEEEEecCc
Q 018401 201 SAYARL-YDYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPFEYADVVTTTTHKSLRGPR-----G-AMIFFRKGV 271 (356)
Q Consensus 201 ~n~g~~-~~l~~I~~la~~~g~~vivD~a~~~g~~~-~~~~~~~l~~~D~~~~s~~K~l~gp~-----g-G~l~~~~~~ 271 (356)
+.+|.. .|+++|+++|+++|+++++|+||..+... .+.... |+|++++++||||++|. | |++++++++
T Consensus 218 n~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~---GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~ 293 (481)
T PRK04366 218 NTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDM---GFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEEL 293 (481)
T ss_pred CCccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCcccc---CCCEEEEechhhcCCCCCCCCCCeeeeeehhhh
Confidence 448866 58999999999999999999999866443 222223 59999999999997553 3 688888865
No 106
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.80 E-value=9.3e-19 Score=147.21 Aligned_cols=164 Identities=23% Similarity=0.232 Sum_probs=119.7
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++++.++++++.+.+++.+++|+++++..++.++.++|++|+++++.|.++.. . .....|.++..+ +.+..
T Consensus 4 ~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--~-----~~~~~g~~~~~v--~~~~~ 74 (170)
T cd01494 4 ELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW--V-----AAELAGAKPVPV--PVDDA 74 (170)
T ss_pred HHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh--h-----HHHhcCCEEEEe--ccCCC
Confidence 45689999997666667777799999998999998899999999988887752 1 233456556555 33322
Q ss_pred C-CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 176 T-GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 176 ~-~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
. ...+.+.+++.....++++++++ +++ +|...|+++|.++|+++|+++|+|++|+.+............++|+++.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s 154 (170)
T cd01494 75 GYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFS 154 (170)
T ss_pred CccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEE
Confidence 2 22333355554443478899887 444 67888999999999999999999999988776642111112259999999
Q ss_pred CCCcCCCCCceEEEEe
Q 018401 253 THKSLRGPRGAMIFFR 268 (356)
Q Consensus 253 ~~K~l~gp~gG~l~~~ 268 (356)
+||+|++|++|++++|
T Consensus 155 ~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 155 LHKNLGGEGGGVVIVK 170 (170)
T ss_pred cccccCCCceEEEEeC
Confidence 9999988666998874
No 107
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.80 E-value=7e-20 Score=172.83 Aligned_cols=203 Identities=22% Similarity=0.252 Sum_probs=140.4
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++.+.+|+.||++.. +.+++|+|.+|.++++++++|||+|+++...|.|++. ++.+.|+.++.++.. +.+
T Consensus 70 eAe~~aA~~fGAd~t-~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~--------alil~ga~Pvyi~p~-~~~ 139 (417)
T PF01276_consen 70 EAEELAARAFGADKT-FFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYN--------ALILSGAIPVYIPPE-DNE 139 (417)
T ss_dssp HHHHHHHHHHTESEE-EEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHH--------HHHHHTEEEEEEEEE-E-T
T ss_pred HHHHHHHHhcCCCeE-EEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHH--------HHHHcCCeEEEecCC-ccc
Confidence 455899999999876 2338888899999999999999999999999988876 566788777666533 322
Q ss_pred CC---CCCH-----HHHHHHhhhc-CCc---EEEEc-CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCC
Q 018401 176 TG---YIDY-----DQLEKSATLF-RPK---LIVAG-ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 242 (356)
Q Consensus 176 ~~---~~d~-----~~l~~~i~~~-~~k---~v~l~-~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~ 242 (356)
.+ .++. +.++++++++ ..| +++++ |+-.|.+.|+++|+++|++++++|++|+||++.....++....
T Consensus 140 ~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a 219 (417)
T PF01276_consen 140 YGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSA 219 (417)
T ss_dssp TS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTC
T ss_pred cCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccch
Confidence 22 4566 9999999763 233 37777 5558999999999999999999999999997654333332222
Q ss_pred CC-Ccc-------EEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHH
Q 018401 243 FE-YAD-------VVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVAL 313 (356)
Q Consensus 243 l~-~~D-------~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al 313 (356)
+. ++| +++.|.||++.+... ++|.++++.. + ..++++....-....+|+++.++++..|.
T Consensus 220 ~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~--------v---~~~~~~~~l~~~~TTSPSY~lmASlD~a~ 288 (417)
T PF01276_consen 220 LALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRI--------V---DHERVNEALSMHQTTSPSYPLMASLDVAR 288 (417)
T ss_dssp SSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCC--------T---THHHHHHHHHHHS-SS--HHHHHHHHHHH
T ss_pred hhccCccccccceeeeechhhcccccccceEEEecCCCc--------c---cHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 32 588 999999999999877 8888887510 0 11222222111224789999999999999
Q ss_pred HHHhcc
Q 018401 314 KQVCTL 319 (356)
Q Consensus 314 ~~~~~~ 319 (356)
+++.++
T Consensus 289 ~~m~~~ 294 (417)
T PF01276_consen 289 AQMEEE 294 (417)
T ss_dssp HHHSHH
T ss_pred HHHhhh
Confidence 999433
No 108
>PLN02483 serine palmitoyltransferase
Probab=99.80 E-value=1.7e-18 Score=169.91 Aligned_cols=191 Identities=20% Similarity=0.147 Sum_probs=129.9
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
.++++.+|+++|.+. . ++.++|+.++..++.+++++||.|++.++.|.+... ++...|++++.+ +.+
T Consensus 149 ~ele~~lA~~~g~~~-a-i~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~--------~~~~~Ga~v~~~--~~~- 215 (489)
T PLN02483 149 RELEELVARFVGKPA-A-IVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVN--------GARGSGATIRVF--QHN- 215 (489)
T ss_pred HHHHHHHHHHhCCCc-E-EEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHH--------HHHHcCCeEEEE--eCC-
Confidence 345588999999644 3 345667888887888999999999999988887654 455677777655 332
Q ss_pred CCCCCCHHHHHHHhhh------cCC-----cEEEEc--C-CCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccC---
Q 018401 175 STGYIDYDQLEKSATL------FRP-----KLIVAG--A-SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG--- 237 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~------~~~-----k~v~l~--~-~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~--- 237 (356)
|.+++++.+.+ .++ ++++++ . +..|.+.++++|.++|++||+++|+|++|+.|.....
T Consensus 216 -----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g 290 (489)
T PLN02483 216 -----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRG 290 (489)
T ss_pred -----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCc
Confidence 45666555431 122 545554 2 3378999999999999999999999999987654211
Q ss_pred C-CCCCC--CCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCC-CCCcHHHHHHHHHHH
Q 018401 238 V-IPSPF--EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQ-GGPHNHTITGLAVAL 313 (356)
Q Consensus 238 ~-~~~~l--~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-gt~~~~~~~al~~Al 313 (356)
. ...++ .++|+++.|++|++ |+.||+++.++ ++.+.+........+ ++.+.+.++++.+++
T Consensus 291 ~~~~~~v~~~~~dI~~~SfSKs~-g~~GG~i~~~~--------------~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL 355 (489)
T PLN02483 291 VCELLGVDPADVDIMMGTFTKSF-GSCGGYIAGSK--------------ELIQYLKRTCPAHLYATSMSPPAVQQVISAI 355 (489)
T ss_pred hHHhcCCCcccCcEEEEecchhc-ccCceEEEcCH--------------HHHHHHHHhCccccccCCcCHHHHHHHHHHH
Confidence 0 01111 24799999999987 45689888776 555655543222223 345556666677889
Q ss_pred HHHhc
Q 018401 314 KQVCT 318 (356)
Q Consensus 314 ~~~~~ 318 (356)
+.+..
T Consensus 356 ~~l~~ 360 (489)
T PLN02483 356 KVILG 360 (489)
T ss_pred HHHHh
Confidence 88764
No 109
>PLN02187 rooty/superroot1
Probab=99.80 E-value=5e-18 Score=165.74 Aligned_cols=207 Identities=13% Similarity=0.065 Sum_probs=145.2
Q ss_pred HcCCeeecCCCC------CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCC
Q 018401 46 WKGLELIPSENF------TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLS 117 (356)
Q Consensus 46 ~~~i~L~~~~~~------~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~s 117 (356)
++.|+|..+++. +++++.+++.+.+..... ..|+...+..++++++.+++.+.++. ++++|++|+|
T Consensus 66 ~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G 139 (462)
T PLN02187 66 KTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKG------NSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAG 139 (462)
T ss_pred CCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCC------CCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCC
Confidence 357888766442 467899999888765221 12333456778888888888776654 7888888999
Q ss_pred chHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 018401 118 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 197 (356)
Q Consensus 118 gs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~ 197 (356)
+++++..++.++++|||.|++++|+|..+ ...+...|.+++.+++... +++.+|+++|++++++ ++++++
T Consensus 140 ~~~al~~~~~~l~~pGd~Vlv~~P~y~~y--------~~~~~~~g~~~~~~~l~~~-~~~~~d~~~l~~~~~~-~~~~v~ 209 (462)
T PLN02187 140 CNQGIEIVFESLARPNANILLPRPGFPHY--------DARAAYSGLEVRKFDLLPE-KEWEIDLEGIEAIADE-NTVAMV 209 (462)
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCCCCccH--------HHHHHHcCCEEEEEeCccc-cCCccCHHHHHHhcCC-CcEEEE
Confidence 99999989999999999999999666443 2234556776766654222 4578999999998876 788887
Q ss_pred Ec-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCC---CC--ccEEEeCCCCcCCCC--CceEE
Q 018401 198 AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---EY--ADVVTTTTHKSLRGP--RGAMI 265 (356)
Q Consensus 198 l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l---~~--~D~~~~s~~K~l~gp--~gG~l 265 (356)
++ |+| ||.+.+ +++|.++|++||++||+|+++.--... +....++ .. --+++.|.+|.++.| +-|++
T Consensus 210 i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~-~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~ 288 (462)
T PLN02187 210 VINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFG-DNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWI 288 (462)
T ss_pred EeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccC-CCCceeHHHhccCCcEEEEecchhhcCCccceeEEE
Confidence 77 888 997776 778888999999999999997531111 1000011 11 137788999986433 33999
Q ss_pred EEec
Q 018401 266 FFRK 269 (356)
Q Consensus 266 ~~~~ 269 (356)
+..+
T Consensus 289 v~~~ 292 (462)
T PLN02187 289 ALND 292 (462)
T ss_pred EecC
Confidence 8853
No 110
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.80 E-value=4.1e-18 Score=161.04 Aligned_cols=202 Identities=10% Similarity=0.030 Sum_probs=140.5
Q ss_pred CeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCC-ccccCCCchHHHH
Q 018401 49 LELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPE-KWGGSLSGSPSNF 123 (356)
Q Consensus 49 i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~-~v~v~~sgs~a~~ 123 (356)
++|..+.+ ++++.+.+++.+.... ...| +...+..++++++.+++.+.+|. +++ +|++|+|+++++.
T Consensus 3 ~~~~~g~p~~~~~~~~~~~~~~~~~~--~~~Y------~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~ 74 (350)
T TIGR03537 3 FDFGTGDPKEPTPPFIRKALIDAVPE--VSQY------PSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIF 74 (350)
T ss_pred EeccCCCCCCCCCHHHHHHHHHHHhc--cCCC------CCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH
Confidence 45554544 4578888888876543 1123 33345678888888888888785 666 7777988889988
Q ss_pred HHHHhhcCCC---CeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 018401 124 QVYTALLKPH---DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG 199 (356)
Q Consensus 124 ~~l~al~~~g---d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~l~ 199 (356)
.++.+++++| |+|+++.+.|..+ ...+...|++++.+ +.+. +++.+|++++++++.+ ++++++++
T Consensus 75 ~~~~~~~~~g~~~d~Vl~~~p~y~~~--------~~~~~~~g~~~~~v--~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~ 143 (350)
T TIGR03537 75 HFPLVFIDPEEDRRRVIFGTPGYPVY--------ERGALFAGGEPTAV--KLKKEDGFLLRLEKVEKSILE-ETKIVWIN 143 (350)
T ss_pred HHHHHHcCCCCCCceEEEcCCCCcch--------HHHHHhcCCEEEEc--ccCcccCCccCHHHHHHhhhh-ccEEEEEe
Confidence 8888888887 6999999555433 33556678777555 4542 3456899999999887 89999988
Q ss_pred -CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCC-CCCCC-CccEEEeCCCCcCCCC--CceEEEEec
Q 018401 200 -ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVI-PSPFE-YADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 200 -~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~-~~~l~-~~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
++| ||...+ +++|.++|+++|+++|+|+++.......... ...++ .-.+++.|++|.++.| +.|+++.++
T Consensus 144 ~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~ 222 (350)
T TIGR03537 144 YPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDE 222 (350)
T ss_pred CCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCH
Confidence 777 898777 7788889999999999999975322111000 00001 1247888999976433 348887655
No 111
>PRK09082 methionine aminotransferase; Validated
Probab=99.80 E-value=2.9e-18 Score=164.18 Aligned_cols=226 Identities=11% Similarity=0.112 Sum_probs=157.9
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la 102 (356)
+++..+...++..+.... ...+.|+|..+++. +++.+.+++.+.+.... .+| ....+..++++++.+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y------~~~~G~~~lr~~~a~~l~ 81 (386)
T PRK09082 10 SKLPNVGTTIFTVMSALA-AEHGAINLSQGFPDFDGPPYLVEALAYAMAAGH-NQY------PPMTGVAALREAIAAKTA 81 (386)
T ss_pred hHhhccCccHHHHHHHHH-hhCCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-CCC------CCCCCcHHHHHHHHHHHH
Confidence 344556666766665432 23456888876654 46888998888765421 122 333556788888999999
Q ss_pred HHcCCC--CC-ccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCC
Q 018401 103 EAFRLD--PE-KWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 179 (356)
Q Consensus 103 ~~~g~~--~~-~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 179 (356)
+++|.+ ++ ++++|+|+++++..++.+++++||+|+++.+.|.++.. .+...|.++..+ +.+.+++.+
T Consensus 82 ~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~--------~~~~~g~~~~~~--~~~~~~~~~ 151 (386)
T PRK09082 82 RLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAP--------AIELAGGRAVRV--ALQPPDFRV 151 (386)
T ss_pred HHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEE--ecCcccccC
Confidence 998874 33 57778899999998899999999999999977665432 344557666555 554345789
Q ss_pred CHHHHHHHhhhcCCcEEEEc-CCC-CCCc---ccHHHHHHHHHHcCCEEEEeccchhhhcccC----CCC-CCCCCccEE
Q 018401 180 DYDQLEKSATLFRPKLIVAG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAG----VIP-SPFEYADVV 249 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~-~~n-~g~~---~~l~~I~~la~~~g~~vivD~a~~~g~~~~~----~~~-~~l~~~D~~ 249 (356)
|++++++++++ ++++|+++ ++| +|.. .++++|.++|++|++++|+|+++........ +.. .+.....++
T Consensus 152 d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~ 230 (386)
T PRK09082 152 DWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFV 230 (386)
T ss_pred CHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEE
Confidence 99999999987 89999887 777 8855 4678889999999999999999753322111 000 011124588
Q ss_pred EeCCCCcCCCC--CceEEEEec
Q 018401 250 TTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 250 ~~s~~K~l~gp--~gG~l~~~~ 269 (356)
+.|++|.++.| +-|+++.++
T Consensus 231 ~~S~SK~~~~~G~RiG~iv~~~ 252 (386)
T PRK09082 231 VSSFGKTYHVTGWKVGYCVAPA 252 (386)
T ss_pred EeechhhccchhhhhhhhhCCH
Confidence 89999987433 339988876
No 112
>PRK07683 aminotransferase A; Validated
Probab=99.80 E-value=7.8e-18 Score=161.27 Aligned_cols=226 Identities=13% Similarity=0.072 Sum_probs=154.8
Q ss_pred cccccChHHHHHHHHHHHHHHcCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHH
Q 018401 26 PLEVVDPEIADIIEHEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (356)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~ 103 (356)
+...+.+..+..........+..++|..+.+ ++++.+.+++.+.+.... .+| +...+..++++++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-~~Y------~~~~g~~~lr~~ia~~l~~ 80 (387)
T PRK07683 8 RVKDIQISGIRQFSNMVQNYDNLISLTIGQPDFPTPSHVKEAAKRAITENY-TSY------THNAGLLELRKAACNFVKD 80 (387)
T ss_pred HHHhCCccHHHHHHHHHHhcCCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCCCHHHHHHHHHHHHH
Confidence 3444555555555554333345688887765 346788899888876422 122 3334567888888888877
Q ss_pred HcCC--CCC-ccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCC
Q 018401 104 AFRL--DPE-KWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 180 (356)
Q Consensus 104 ~~g~--~~~-~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 180 (356)
.+|. +++ ++++|+|+++++..++.+++++||.|+++.+.|..+.. .+...|.+++.+ +.+.+++.+|
T Consensus 81 ~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~--~~~~~~~~~~ 150 (387)
T PRK07683 81 KYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEP--------IIRLCGAKPVFI--DTRSTGFRLT 150 (387)
T ss_pred HhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHH--------HHHHcCCEEEEe--ecCcccCCCC
Confidence 7675 676 78779999999998888999999999999965544322 334556656444 5554456788
Q ss_pred HHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC---CCCC-CCCCccEEEe
Q 018401 181 YDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG---VIPS-PFEYADVVTT 251 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~---~~~~-~l~~~D~~~~ 251 (356)
.+++++.+.+ ++++++++ ++| ||...+ +++|.++|+++|+++|+|+++........ +... ...+-.+++.
T Consensus 151 ~~~l~~~~~~-~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~ 229 (387)
T PRK07683 151 AEALENAITE-KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVIN 229 (387)
T ss_pred HHHHHHhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEe
Confidence 9999998876 78999887 777 887654 77889999999999999999864322111 1111 0112358899
Q ss_pred CCCCcCCCC--CceEEEEec
Q 018401 252 TTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 252 s~~K~l~gp--~gG~l~~~~ 269 (356)
|.+|.++.| +-|+++.++
T Consensus 230 s~SK~~~~pGlRiG~i~~~~ 249 (387)
T PRK07683 230 GLSKSHSMTGWRIGFLFAPS 249 (387)
T ss_pred eccccccCccceeEEEEcCH
Confidence 999987534 239998876
No 113
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.79 E-value=2.9e-18 Score=163.26 Aligned_cols=225 Identities=18% Similarity=0.117 Sum_probs=143.8
Q ss_pred cHHHHHHHHhhhhccC------CCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCC
Q 018401 59 SVSVMQAVGSVMTNKY------SEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKP 132 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~ 132 (356)
+|++.+++.+++.... ..+..+++...+ ..++.+++++.+++++|++.. ++.++|+.++..++..+.++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g---~~~~~~~~e~~la~~~~~~~~--l~~~sG~~a~~~~~~~~~~~ 94 (370)
T PRK05937 20 SDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILG---PSSLLDDLEHKIAHFHGAPEA--FIVPSGYMANLGLCAHLSSV 94 (370)
T ss_pred CHHHHHHHHHHHHHhccccCCCCCCCCCcCcccC---ChHHHHHHHHHHHHHhCCCeE--EEECChHHHHHHHHHHhCCC
Confidence 5667776666665411 112223322211 234445677999999999654 45666777787666666678
Q ss_pred CCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc-CCC-CCC
Q 018401 133 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG-ASA-YAR 205 (356)
Q Consensus 133 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~-----~~k~v~l~-~~n-~g~ 205 (356)
||.|++...+|++...++... .+. .+.++ ..|+++|++.+++. ++.+|+++ ++| +|.
T Consensus 95 ~d~ii~d~~~H~sv~~~~~~~-------~~~---~~~~~------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~ 158 (370)
T PRK05937 95 TDYVLWDEQVHISVVYSLSVI-------SGW---HQSFR------HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGT 158 (370)
T ss_pred CCEEEEEhhhhHHHHHHHHHc-------CCc---eEEec------CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCC
Confidence 999999899998887644311 111 12222 35899999988631 34466666 555 899
Q ss_pred cccHHHHHHHHHHcCCEEEEeccchhhhcccCCC----CCCCCCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcch
Q 018401 206 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEV 281 (356)
Q Consensus 206 ~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~----~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~ 281 (356)
+.|+++|.++|+++|+++++|++|+.|.++.+.. .++....++++.|.+|.+ ||.|+.++..+
T Consensus 159 i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~vl~~~------------ 225 (370)
T PRK05937 159 LAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAALLSSS------------ 225 (370)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEEEcCH------------
Confidence 9999999999999999999999999998776542 222223346677888965 67774444444
Q ss_pred hhhHHHhhccccCCCCC-CCCcHHHHHHHHHHHHHHhcc
Q 018401 282 FYDYEEKINQAVFPGLQ-GGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 282 ~~~~~~~~~~~~~~~~~-gt~~~~~~~al~~Al~~~~~~ 319 (356)
+....+.....+..+ ++.+.+.++++.+|++++.+.
T Consensus 226 --~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~ 262 (370)
T PRK05937 226 --EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQE 262 (370)
T ss_pred --HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhC
Confidence 222222211123333 456677889999999999764
No 114
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.79 E-value=2.6e-18 Score=162.34 Aligned_cols=158 Identities=18% Similarity=0.177 Sum_probs=120.1
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
++++.+++++|.+ ++++++||++++..++.++ +++||+|+++.++|.++..+ +...|.+++.+ +++.
T Consensus 22 ~~~~~la~~~~~~--~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~--------~~~~g~~~~~~--~~~~ 89 (352)
T cd00616 22 EFEKAFAEYLGVK--YAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANA--------ILLLGATPVFV--DIDP 89 (352)
T ss_pred HHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHH--------HHHcCCeEEEE--ecCC
Confidence 4558899999964 4566889999998888888 68999999999888766442 33456555545 5553
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC-
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT- 253 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~- 253 (356)
.++.+|++++++++++ ++++|+++. .+|...|+++|.++|+++|+++|+|++|+.|....+..... ..|+.++|+
T Consensus 90 ~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~--~~d~~~~S~~ 165 (352)
T cd00616 90 DTYNIDPELIEAAITP-RTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGT--FGDAGAFSFH 165 (352)
T ss_pred CcCCcCHHHHHHhcCc-CCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEccc--CcceeEEcCC
Confidence 3578899999999976 899988862 37888999999999999999999999999887654321111 146677665
Q ss_pred -CCcCCCCCceEEEEec
Q 018401 254 -HKSLRGPRGAMIFFRK 269 (356)
Q Consensus 254 -~K~l~gp~gG~l~~~~ 269 (356)
+|+++++.||++++++
T Consensus 166 ~~K~~~~~~gg~~~~~~ 182 (352)
T cd00616 166 PTKNLTTGEGGAVVTND 182 (352)
T ss_pred CCCCCcccCceEEEECC
Confidence 5999777788888875
No 115
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.79 E-value=5.3e-18 Score=163.73 Aligned_cols=229 Identities=16% Similarity=0.152 Sum_probs=152.1
Q ss_pred hhcccccccChHHHHHHHHHHH--HHHcCCeeecCCC------CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHH
Q 018401 22 QLNAPLEVVDPEIADIIEHEKA--RQWKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (356)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~L~~~~~------~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 93 (356)
.+..+...+...+...+.+..+ ..++.|+|..+.+ ++++.+.+++.+.+......+| +...+..++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y------~~~~G~~~L 80 (412)
T PTZ00433 7 SMSKHAGRVFNPLRTVTDNAKPSPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGY------PPTVGSPEA 80 (412)
T ss_pred cccHHHHhhhccHHHHHHhhccCCCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCC------CCCCCcHHH
Confidence 3434444444444444443322 2346788886654 3688899999887764211123 333456788
Q ss_pred HHHHHHHHHHHcC--------CCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceee
Q 018401 94 ESLCQKRALEAFR--------LDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 165 (356)
Q Consensus 94 ~~~~~~~la~~~g--------~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 165 (356)
++++.+++.+.++ ++++++++|+|+++++..++.+++++||+|+++.++|..+.. .+...|+++
T Consensus 81 r~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~~ 152 (412)
T PTZ00433 81 REAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET--------VCKAYGIEM 152 (412)
T ss_pred HHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH--------HHHHcCCEE
Confidence 8888788876553 577888889999999998999999999999999966654432 344567666
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCC-
Q 018401 166 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVI- 239 (356)
Q Consensus 166 ~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~- 239 (356)
..++++.+ +++.+|++++++++.+ ++++|+++ ++| ||.+.+ +++|.++|+++|++||+|+++. .....+..
T Consensus 153 ~~i~~~~~-~~~~~d~~~l~~~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~ 229 (412)
T PTZ00433 153 RFYNCRPE-KDWEADLDEIRRLVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYA-GMVFNGATF 229 (412)
T ss_pred EEEecCcc-ccCcCCHHHHHHHhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccc-ccccCCCCc
Confidence 65643211 3468999999998876 79999887 888 896665 6677888999999999999975 22211100
Q ss_pred C--CCCC--CccEEEeCCCCcCCCC--CceEEEE
Q 018401 240 P--SPFE--YADVVTTTTHKSLRGP--RGAMIFF 267 (356)
Q Consensus 240 ~--~~l~--~~D~~~~s~~K~l~gp--~gG~l~~ 267 (356)
. ..+. ..-+++.|++|.++.| +-|+++.
T Consensus 230 ~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~ 263 (412)
T PTZ00433 230 TSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLL 263 (412)
T ss_pred cchhhccCCCceEEEccchhhcCCCCeeEEEEEE
Confidence 0 0111 1137789999976433 3399987
No 116
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.79 E-value=1e-17 Score=162.33 Aligned_cols=206 Identities=12% Similarity=0.004 Sum_probs=145.6
Q ss_pred cCCeeecCCC------CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCc
Q 018401 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSG 118 (356)
Q Consensus 47 ~~i~L~~~~~------~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sg 118 (356)
+.|+|..+++ ++++++.+++.+++......+| +...+..++++++++++.+.+|. +++++++|+|+
T Consensus 53 ~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y------~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~ 126 (430)
T PLN00145 53 PVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSY------STCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGC 126 (430)
T ss_pred CeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCC------CCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCH
Confidence 5788887654 3578999999988865321223 33345678888888888776665 67788889999
Q ss_pred hHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 018401 119 SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 198 (356)
Q Consensus 119 s~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l 198 (356)
++++.+++.++++|||+|+++++.|..+ .....+.|.+++.+++... +++.+|++++++++++ +++++++
T Consensus 127 ~~al~l~~~~l~~~Gd~Vlv~~P~y~~y--------~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~-~~~~i~i 196 (430)
T PLN00145 127 AQAIEIIMSVLAQPGANILLPRPGYPLY--------EARAVFSGLEVRHFDLLPE-RGWEVDLEGVEALADE-NTVAMVI 196 (430)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCccH--------HHHHHHcCCEEEEeeCCcc-cCCcCCHHHHHHHhCc-CceEEEE
Confidence 9999989999999999999999655443 2234456766655543222 3568999999998877 7888888
Q ss_pred c-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCC---C--CccEEEeCCCCcCCCC--CceEEE
Q 018401 199 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSLRGP--RGAMIF 266 (356)
Q Consensus 199 ~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l---~--~~D~~~~s~~K~l~gp--~gG~l~ 266 (356)
+ |+| +|.+.+ +++|+++|+++|+++|+|+++..-... +....++ . ..-+++.|.+|.+..| +-|+++
T Consensus 197 ~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~-~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv 275 (430)
T PLN00145 197 INPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFG-SKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIA 275 (430)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccC-CCCccchhhhcccCcEEEEeccccccCCCCeeEEEEE
Confidence 7 888 898887 778888899999999999997432211 1111111 1 1238899999976443 339998
Q ss_pred Eec
Q 018401 267 FRK 269 (356)
Q Consensus 267 ~~~ 269 (356)
..+
T Consensus 276 ~~~ 278 (430)
T PLN00145 276 TCD 278 (430)
T ss_pred Eec
Confidence 753
No 117
>PLN02656 tyrosine transaminase
Probab=99.79 E-value=8.3e-18 Score=162.20 Aligned_cols=205 Identities=13% Similarity=0.019 Sum_probs=144.1
Q ss_pred HcCCeeecCCC------CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCC
Q 018401 46 WKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLS 117 (356)
Q Consensus 46 ~~~i~L~~~~~------~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~s 117 (356)
++.|+|..+++ ++|+.+++++.+.+......+| +...+..++++++.+++.+.+|. +++++++++|
T Consensus 31 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y------~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G 104 (409)
T PLN02656 31 KRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGY------APTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSG 104 (409)
T ss_pred CeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCC------CCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCC
Confidence 36788887765 4578999999887765322233 33345677887888888777664 6778888999
Q ss_pred chHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEE
Q 018401 118 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLI 196 (356)
Q Consensus 118 gs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~k~v 196 (356)
+++++..++.+++++||+|++++++|..+. ......|++++.++ .+. +++.+|++++++++++ +++++
T Consensus 105 ~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~~~~~i~--~~~~~~~~~d~~~l~~~~~~-~~~~v 173 (409)
T PLN02656 105 CTQAIDVALSMLARPGANILLPRPGFPIYE--------LCAAFRHLEVRYVD--LLPEKGWEVDLDAVEALADQ-NTVAL 173 (409)
T ss_pred hHHHHHHHHHHHhCCCCeEEEeCCCCCcHH--------HHHHHcCCEEEEEe--CCCcCCCCCCHHHHHHHhcc-CceEE
Confidence 999998888999999999999997764332 13344576666664 432 3467999999998876 78888
Q ss_pred EEc-CCC-CCCcc---cHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCC---C--CccEEEeCCCCcCCCC--CceE
Q 018401 197 VAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSLRGP--RGAM 264 (356)
Q Consensus 197 ~l~-~~n-~g~~~---~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l---~--~~D~~~~s~~K~l~gp--~gG~ 264 (356)
+++ |+| +|.+. ++++|.++|+++|+++|+|+++.--... +....++ + ..-+++.|++|.++.| +-|+
T Consensus 174 ~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~ 252 (409)
T PLN02656 174 VIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFG-SNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGW 252 (409)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccC-CCCcccHHHhcccCcEEEEcccchhccCcceeEEE
Confidence 887 887 88665 5788899999999999999997521111 1010111 1 1237889999976444 3399
Q ss_pred EEEe
Q 018401 265 IFFR 268 (356)
Q Consensus 265 l~~~ 268 (356)
++..
T Consensus 253 ~i~~ 256 (409)
T PLN02656 253 FVTT 256 (409)
T ss_pred EEEe
Confidence 9984
No 118
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.79 E-value=7.5e-18 Score=161.82 Aligned_cols=205 Identities=20% Similarity=0.251 Sum_probs=140.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccce
Q 018401 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 163 (356)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 163 (356)
|++..+..+++ +.+++++|.+ +++++.||++++..+++++++|||.| +++ +.|..+...+.+.|+
T Consensus 49 Y~~~~g~~~Le----eaia~~~g~~--~vv~t~~Gt~Al~la~~al~~pGD~V-~~~--------~~f~~~~~~i~~~Ga 113 (431)
T cd00617 49 YAGSKSFYDLE----DAVQDLFGFK--HIIPTHQGRGAENILFSILLKPGRTV-PSN--------MHFDTTRGHIEANGA 113 (431)
T ss_pred cCCCCCHHHHH----HHHHHHHCCC--eEEEcCCHHHHHHHHHHHhCCCCCEE-ccC--------CcccchHHHHHhCCC
Confidence 45556666776 6677778876 35669999999998999999999987 455 333333335667787
Q ss_pred eeEEEecccCC-------CCCCCCHHHHHHHhhhc---CCcEEEEc-CCC-C-CCccc---HHHHHHHHHHcCCEEEEec
Q 018401 164 FFETMPYRLNE-------STGYIDYDQLEKSATLF---RPKLIVAG-ASA-Y-ARLYD---YERIRKVCNKQKAIMLADM 227 (356)
Q Consensus 164 ~~~~v~~~~~~-------~~~~~d~~~l~~~i~~~---~~k~v~l~-~~n-~-g~~~~---l~~I~~la~~~g~~vivD~ 227 (356)
..+.++++... ..+.+|+++|++++++. ++++|+++ ++| + |.+.+ +++|.++|++||++||.|+
T Consensus 114 ~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~Da 193 (431)
T cd00617 114 VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDA 193 (431)
T ss_pred EeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 77666443211 12459999999999862 37888887 777 5 76664 5678999999999999999
Q ss_pred cchhhhccc------CCCCCC--------CCCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHhhcccc
Q 018401 228 AHISGLVAA------GVIPSP--------FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV 293 (356)
Q Consensus 228 a~~~g~~~~------~~~~~~--------l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 293 (356)
||..+.... +....+ +...|.+++|++|.+.+|.||+++++++ ++.++++...
T Consensus 194 Ar~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~-------------~l~~~~~~~~ 260 (431)
T cd00617 194 ARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDD-------------ELYEEARQRV 260 (431)
T ss_pred hhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcH-------------HHHHHHHHhc
Confidence 998652211 111111 1248999999999998999999999874 4555554321
Q ss_pred --CCC--CCCCCcHHHHHHHHHHHHHH
Q 018401 294 --FPG--LQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 294 --~~~--~~gt~~~~~~~al~~Al~~~ 316 (356)
..+ ..|..+...++|++.+|+..
T Consensus 261 ~~~~~~~~~gG~~~r~~~A~A~gL~e~ 287 (431)
T cd00617 261 VLYEGFVTYGGMAGRDMEALAQGLREA 287 (431)
T ss_pred cccCCccccccccHHHHHHHHHHHHhc
Confidence 111 12566666777777787664
No 119
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.79 E-value=3.6e-18 Score=164.91 Aligned_cols=200 Identities=13% Similarity=0.081 Sum_probs=133.4
Q ss_pred cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCC
Q 018401 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKP 132 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~ 132 (356)
.+-+++|++|++++.+++.. |. +.....-.+..+ ...+.+++.+++++|++.. ++++|+++++..++ ..+.+
T Consensus 88 lg~s~l~~~vieAv~~~~~~-y~--~l~~~l~~g~~g--~r~~~le~~lA~l~gae~a--lvv~sg~aAi~l~l-~~l~~ 159 (454)
T TIGR00474 88 LGRAPLAEEAIEAVTDAARG-YS--NLEYDLETGKRG--SRYSHVEGLLCELTGAEDA--LVVNNNAAAVLLAL-NTLAK 159 (454)
T ss_pred CCCCCCCHHHHHHHHHHHhc-cc--chhccccccccc--hHHHHHHHHHHHHhCCCcE--EEECCHHHHHHHHH-HHhCC
Confidence 44557799999999998875 31 111000001111 1124567999999999764 45777888877666 45789
Q ss_pred CCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCC---C--Cc
Q 018401 133 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAY---A--RL 206 (356)
Q Consensus 133 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n~---g--~~ 206 (356)
||+|++++.+|..+-.. +.. ...+...|++++.+ +.+ ...|++++++++++ +|++|++. ++|+ | ..
T Consensus 160 GdeVIvs~~e~v~~ggs-~~i-~~~~~~~G~~~~~v--~~~---~~~~l~dle~aI~~-~T~lv~~~h~sN~~~~G~~~~ 231 (454)
T TIGR00474 160 GKEVIVSRGELVEIGGS-FRI-PDVMEQSGAKLVEV--GTT---NRTHLKDYEDAITE-NTALLLKVHTSNYRIVGFTEE 231 (454)
T ss_pred cCEEEECCChhhhhcch-hhH-HHHHHHcCCEEEEe--CCC---CCCCHHHHHHhcCc-CCEEEEEEccCcccccCCCCC
Confidence 99999998775322111 111 11233456666555 333 34589999999987 89998876 7663 5 47
Q ss_pred ccHHHHHHHHHHcCCEEEEeccchhhhc-c---cCCCCC-----CC-CCccEEEeCCCCcCCCCCceEEEEecC
Q 018401 207 YDYERIRKVCNKQKAIMLADMAHISGLV-A---AGVIPS-----PF-EYADVVTTTTHKSLRGPRGAMIFFRKG 270 (356)
Q Consensus 207 ~~l~~I~~la~~~g~~vivD~a~~~g~~-~---~~~~~~-----~l-~~~D~~~~s~~K~l~gp~gG~l~~~~~ 270 (356)
.|+++|+++||++|+++++|.+ +|.+ + .++... ++ .|+|++++|+||||+||.+|+++++++
T Consensus 232 ~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~~ 303 (454)
T TIGR00474 232 VSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKKE 303 (454)
T ss_pred CCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECHH
Confidence 8999999999999999999975 4432 1 011111 11 259999999999999998899999873
No 120
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.79 E-value=1.3e-17 Score=160.15 Aligned_cols=222 Identities=14% Similarity=0.061 Sum_probs=150.3
Q ss_pred ccChHHHHHHHHHHHHH-----HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHH
Q 018401 29 VVDPEIADIIEHEKARQ-----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (356)
Q Consensus 29 ~~~~~~~~~~~~~~~~~-----~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 101 (356)
..+.+.+..+.+..+.. ++.++|..++++ +|+.+++++.+.+... ..| +...+..++++++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~--~~Y------~~~~G~~~lr~aia~~~ 77 (393)
T TIGR03538 6 RLQPYPFEKLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLHGL--STY------PTTKGLPELRQAIARWL 77 (393)
T ss_pred hCCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhhcc--CCC------CCCCCCHHHHHHHHHHH
Confidence 34445566665554432 367888877775 5788999988766431 123 33345677888888888
Q ss_pred HHHcCC----CCC-ccccCCCchHHHHHHHHhhcCCCCe--eeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 102 LEAFRL----DPE-KWGGSLSGSPSNFQVYTALLKPHDR--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 102 a~~~g~----~~~-~v~v~~sgs~a~~~~l~al~~~gd~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
.+.+|. +++ ++++|+|+++++..++.++++|||. |+++.|.| ..+...+...|.+++.+ ++++
T Consensus 78 ~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y--------~~~~~~~~~~g~~~~~v--~~~~ 147 (393)
T TIGR03538 78 ERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFY--------QIYEGAALLAGAEPYFL--NCTA 147 (393)
T ss_pred HHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCC--------cchHHHHHhcCCeEEEe--eccc
Confidence 877664 554 5667889999999899999999996 88888544 33333445567666555 4442
Q ss_pred C-CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCC--------
Q 018401 175 S-TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-------- 240 (356)
Q Consensus 175 ~-~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~-------- 240 (356)
+ ++.+|++++++++.+ ++|+|+++ |+| ||.+.+ +++|.++|++|+++||+|+++..-........
T Consensus 148 ~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~ 226 (393)
T TIGR03538 148 ENGFLPDFDAVPESVWR-RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAA 226 (393)
T ss_pred cCCCCCCHHHHHHHHhh-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcc
Confidence 3 357899999998876 89999887 888 997776 67888889999999999999753221100000
Q ss_pred -CCCC--CccEEEeCCCCcC--CCCCceEEEEec
Q 018401 241 -SPFE--YADVVTTTTHKSL--RGPRGAMIFFRK 269 (356)
Q Consensus 241 -~~l~--~~D~~~~s~~K~l--~gp~gG~l~~~~ 269 (356)
.+.. .--+++.|.+|.+ .|.+-|+++.++
T Consensus 227 ~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~ 260 (393)
T TIGR03538 227 QLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDA 260 (393)
T ss_pred cccccccccEEEEecchhhcCCcccceEEEecCH
Confidence 0000 0128899999965 344449988766
No 121
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.79 E-value=1.6e-18 Score=163.43 Aligned_cols=197 Identities=15% Similarity=0.114 Sum_probs=139.9
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.|+|..++++ +||.+++++.++..... .|+.. . . .++|+.++++++++++++++++|+++++..
T Consensus 20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~--~y~~~------~-~----~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~ 86 (346)
T TIGR01141 20 EVIKLNSNENPFGPPPKAKEALRAEADKLH--RYPDP------D-P----AELKQALADYYGVDPEQILLGNGSDEIIEL 86 (346)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHhHHHhh--cCCCC------C-H----HHHHHHHHHHhCcChHHEEEcCCHHHHHHH
Confidence 46888877764 58899999998764321 23222 1 1 246688899999988888888888888887
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n- 202 (356)
++.+++++||+|++++++|+.+ ...+...|.++..+ +.+ +++.+|++++++++.+ ++++|+++ ++|
T Consensus 87 ~~~~l~~~gd~v~~~~p~y~~~--------~~~~~~~g~~~~~~--~~~-~~~~~d~~~l~~~~~~-~~~~v~l~~p~Np 154 (346)
T TIGR01141 87 LIRAFLEPGDAVLVPPPTYSMY--------EISAKIHGAEVVKV--PLD-EDGQLDLEDILVAIDD-KPKLVFLCSPNNP 154 (346)
T ss_pred HHHHhcCCCCEEEEcCCCHHHH--------HHHHHHcCCeEEEe--ccC-CCCCCCHHHHHHhcCC-CCCEEEEeCCCCC
Confidence 8888899999999999655322 22334556666555 555 3477999999998766 89999988 777
Q ss_pred CCCcccHHHHHHHHHHc--CCEEEEeccchhhhcccC-CC-CCCCCCccEEEeCCCCcCCCC--CceEEEEec
Q 018401 203 YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAG-VI-PSPFEYADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~--g~~vivD~a~~~g~~~~~-~~-~~~l~~~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
+|...+++++.++|+.+ ++++|+|++|+. ..... .. .......++++.|.+|+++.| +.|+++.++
T Consensus 155 tG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~-~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~ 226 (346)
T TIGR01141 155 TGNLLSRSDIEAVLERTPEDALVVVDEAYGE-FSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA 226 (346)
T ss_pred CCCCCCHHHHHHHHHhCCCCcEEEEECchhh-hcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCH
Confidence 89999999999999887 999999999862 22110 00 000001357788999988433 338888876
No 122
>PLN02822 serine palmitoyltransferase
Probab=99.79 E-value=5.6e-18 Score=165.92 Aligned_cols=234 Identities=15% Similarity=0.117 Sum_probs=149.5
Q ss_pred cCCeeecCCC---CCcHHHHHHHHhhhhccCCCCCCCCcc-CCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHH
Q 018401 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 47 ~~i~L~~~~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~ 122 (356)
+.++|..+.. ..+|++++++.+.++. |..++.+++. |+...... ++++.++++++.+ +.+++++|++ ++
T Consensus 110 ~~id~~s~~~lgl~~~~~i~ea~~~al~~-~G~g~~g~r~~yg~~~~~~----~Lee~La~~~~~~-~~i~~s~G~~-a~ 182 (481)
T PLN02822 110 DVVNFASANYLGLIGNEKIKESCTSALEK-YGVGSCGPRGFYGTIDVHL----DCETKIAKFLGTP-DSILYSYGLS-TI 182 (481)
T ss_pred eEEEeECCCcCCCCCCHHHHHHHHHHHHH-hCCCCcccCccccCHHHHH----HHHHHHHHHhCCC-CEEEECCHHH-HH
Confidence 4577765432 2589999999999986 4445555443 33333344 4558899999975 3455565554 66
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhh---h-----cCC-
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT---L-----FRP- 193 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~---~-----~~~- 193 (356)
..++.+++++||.|++....|.++.. ++.+.+.+++.+ +.+ |.++++..+. + .++
T Consensus 183 ~sai~a~~~~gd~Ii~d~~~H~s~~~--------~~~ls~~~~~~~--~~n------d~~~l~~~l~~~~~~~~~~~~~~ 246 (481)
T PLN02822 183 FSVIPAFCKKGDIIVADEGVHWGIQN--------GLYLSRSTIVYF--KHN------DMESLRNTLEKLTAENKRKKKLR 246 (481)
T ss_pred HHHHHHhCCCCCEEEEeCCccHHHHH--------HHHHcCCeEEEE--CCC------CHHHHHHHHHHHhhhhcccCCCc
Confidence 77999999999999988766654422 444556555444 433 3444444332 1 134
Q ss_pred cEEEEc--CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCC--CCccEEEeCCCCcCCCCCceEE
Q 018401 194 KLIVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPF--EYADVVTTTTHKSLRGPRGAMI 265 (356)
Q Consensus 194 k~v~l~--~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l--~~~D~~~~s~~K~l~gp~gG~l 265 (356)
++|++. .+++|.+.|+++|.++|++||+++|+|++|+.|.+...- ...++ ..+|++++|.+|++ |..||++
T Consensus 247 ~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKal-g~~GG~i 325 (481)
T PLN02822 247 RYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHAL-ATEGGFC 325 (481)
T ss_pred EEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhh-hhCCeEE
Confidence 577776 445899999999999999999999999999977653110 11111 24799999999988 4567888
Q ss_pred EEecCcchhccCCcchhhhHHHhhccccCCCCCC-CCcHHHHHHHHHHHHHHhc
Q 018401 266 FFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG-GPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g-t~~~~~~~al~~Al~~~~~ 318 (356)
+.++ ++.+.+........++ +.+....+|..+|++.+.+
T Consensus 326 ~g~~--------------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~ 365 (481)
T PLN02822 326 TGSA--------------RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLED 365 (481)
T ss_pred EcCH--------------HHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHh
Confidence 8776 4555444322223343 2233344444468877654
No 123
>PRK04311 selenocysteine synthase; Provisional
Probab=99.78 E-value=6e-18 Score=163.76 Aligned_cols=231 Identities=11% Similarity=0.057 Sum_probs=146.9
Q ss_pred cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCC
Q 018401 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKP 132 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~ 132 (356)
.+.+++++++++++.+++.+ +. +.......+..+ .. .+.+++.+++++|++.. ++++++++++..++.+ +.+
T Consensus 93 lg~s~l~~~v~eav~~~~~~-~~--~le~~l~~g~~g-~r-~~~~e~~lA~l~Gae~a--~vv~sgtaAl~l~l~~-l~~ 164 (464)
T PRK04311 93 LGRALLSEAAIEAVTEAARG-YS--NLEYDLATGKRG-SR-DRALAALLCALTGAEDA--LVVNNNAAAVLLALNA-LAA 164 (464)
T ss_pred CCCCCCCHHHHHHHHHHHhc-cc--ccccchhhcccc-hH-HHHHHHHHHHHhCCCeE--EEECCHHHHHHHHHHH-hCC
Confidence 45567899999999988765 31 111000001111 11 23566999999998753 5577888888866644 689
Q ss_pred CCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC---CC--Cc
Q 018401 133 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA---YA--RL 206 (356)
Q Consensus 133 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n---~g--~~ 206 (356)
||+|++++.+|...-..+. . ...+...|++++.+ +.+ ...+++++++++++ +|++|++. ++| +| ..
T Consensus 165 GdeVIvs~~e~~~~ggs~~-i-~~~~~~~G~~l~~v--~~~---~~t~~~dle~aI~~-~TklV~~vh~sN~~i~G~~~~ 236 (464)
T PRK04311 165 GKEVIVSRGELVEIGGAFR-I-PDVMRQAGARLVEV--GTT---NRTHLRDYEQAINE-NTALLLKVHTSNYRIEGFTKE 236 (464)
T ss_pred CCEEEEcchhhhhcCcchh-h-HHHHHHCCcEEEEE--CCC---CCCCHHHHHHhcCc-cCeEEEEEcCCCccccccCCc
Confidence 9999999876653211111 1 11223456666555 433 34579999999987 89998886 766 24 56
Q ss_pred ccHHHHHHHHHHcCCEEEEeccchhhhcc----c------CCCCCCC-CCccEEEeCCCCcCCCCCceEEEEecCcchhc
Q 018401 207 YDYERIRKVCNKQKAIMLADMAHISGLVA----A------GVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN 275 (356)
Q Consensus 207 ~~l~~I~~la~~~g~~vivD~a~~~g~~~----~------~~~~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~ 275 (356)
.|+++|+++|++||+++++|.++ |.+. . .+.. ++ .|+|++++|+||||+||.+|++++++
T Consensus 237 ~dl~eI~~lak~~gi~vivD~gs--G~l~~~~~~gl~~~p~~~~-~l~~GaDiv~fSg~K~LgGp~~G~i~g~~------ 307 (464)
T PRK04311 237 VSLAELAALGKEHGLPVVYDLGS--GSLVDLSQYGLPDEPTVQE-LLAAGVDLVTFSGDKLLGGPQAGIIVGKK------ 307 (464)
T ss_pred CCHHHHHHHHHHcCCeEEEECCC--cccccchhccCCCCCchhh-HHhcCCcEEEecCcccccCCceEEEEEcH------
Confidence 79999999999999999999963 2220 0 1111 11 25999999999999999889999987
Q ss_pred cCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHh
Q 018401 276 KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 317 (356)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~ 317 (356)
++.++++.... .+.-..+-..++++.+++....
T Consensus 308 --------~li~~l~~~~~-~r~lr~dk~~l~~l~~~l~~~~ 340 (464)
T PRK04311 308 --------ELIARLKKHPL-KRALRVDKLTLAALEATLRLYL 340 (464)
T ss_pred --------HHHHHHhhchh-HHHHhcchHHHHHHHHHHHHHh
Confidence 44444432111 0011223345667777776554
No 124
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=1.5e-18 Score=165.52 Aligned_cols=153 Identities=16% Similarity=0.120 Sum_probs=115.8
Q ss_pred HHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCC
Q 018401 97 CQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 176 (356)
Q Consensus 97 ~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 176 (356)
+++.+++++|.+. +++++||++++..++.+++++||+|+++.+.|+++...+.. ....|+.+..+
T Consensus 58 lE~~lA~l~g~~~--~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~-----~~~~g~~v~~~-------- 122 (385)
T PRK08574 58 LEEALAKLEGGVD--ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKS-----LEKFGVKVVLA-------- 122 (385)
T ss_pred HHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHH-----hhccCcEEEEE--------
Confidence 4488999999753 45688999999989999999999999999888776543221 11234333222
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCC
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 254 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~ 254 (356)
.+|++++++++++.++++|+++ ++| +|.+.|+++|+++|+++|+++|+|++|+.|.....+ .. ++|++++|++
T Consensus 123 -~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l-~~---GaDivv~S~s 197 (385)
T PRK08574 123 -YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPL-RH---GADFVVHSLT 197 (385)
T ss_pred -CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChh-hh---CCcEEEeeCc
Confidence 2368899998875479999987 777 899999999999999999999999999877543222 22 4899999999
Q ss_pred CcCCCCC---ceEEEEec
Q 018401 255 KSLRGPR---GAMIFFRK 269 (356)
Q Consensus 255 K~l~gp~---gG~l~~~~ 269 (356)
|+++||. ||++++++
T Consensus 198 K~l~g~~d~~gG~vi~~~ 215 (385)
T PRK08574 198 KYIAGHNDVVGGVAVAWS 215 (385)
T ss_pred eeecCCCCceeEEEEECc
Confidence 9998874 57566654
No 125
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.78 E-value=3.5e-18 Score=167.67 Aligned_cols=244 Identities=14% Similarity=0.115 Sum_probs=152.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCC-------------CccccCCCchHHHHHHHHhh----cC-------------------
Q 018401 88 EYIDMAESLCQKRALEAFRLDP-------------EKWGGSLSGSPSNFQVYTAL----LK------------------- 131 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~-------------~~v~v~~sgs~a~~~~l~al----~~------------------- 131 (356)
....++|+.+.+|++++++..+ ..-++++|||++|..++.+. +.
T Consensus 125 pa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~ 204 (522)
T TIGR03799 125 KAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKH 204 (522)
T ss_pred cchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhh
Confidence 3356888999999999985311 11245889998888766542 11
Q ss_pred ---CCCeeeecCCCCCcccCcccccccccccccce---eeEEEecccCCCCCCCCHHHHHHHhhh---cCCcEEEEc---
Q 018401 132 ---PHDRIMALDLPHGGHLSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAG--- 199 (356)
Q Consensus 132 ---~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~i~~---~~~k~v~l~--- 199 (356)
++..|++++.+|.++.. .+.+.|. .++.+ +++ +++.+|+++|++++.+ .+++.++++
T Consensus 205 ~~~~~~~v~~S~~~H~S~~k--------aa~~lglg~~~v~~v--p~d-~~g~~d~~~L~~~i~~~~~~g~~~~~vvata 273 (522)
T TIGR03799 205 YGYDGLAILVSERGHYSLGK--------AADVLGIGRDNLIAI--KTD-ANNRIDVDALRDKCAELAEQNIKPLAIVGVA 273 (522)
T ss_pred ccCCceEEEECCCchHHHHH--------HHHHcCCCcccEEEE--EeC-CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 23468888888988753 2333444 35455 555 5689999999998862 245555443
Q ss_pred CC-CCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCC---CCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcc-h
Q 018401 200 AS-AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI---PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK-E 273 (356)
Q Consensus 200 ~~-n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~---~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~-~ 273 (356)
.+ .+|.+.|+++|+++|+++|+++++|+||+.+.+..+-. -.++.++|++++++|||+++|.| |+++++++.. .
T Consensus 274 Gtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~ 353 (522)
T TIGR03799 274 GTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMS 353 (522)
T ss_pred cCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHH
Confidence 23 38999999999999999999999999998776543311 12233599999999999999999 9999987421 0
Q ss_pred hccCCcchhhhHHHhh-ccccCCCC-CCCCcHHHHHHHHHHHHHHhcccccchhhcccccc--h-HHHHhhhcccccccc
Q 018401 274 INKQGKEVFYDYEEKI-NQAVFPGL-QGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHV--Y-PAFVSNQNNSENIEE 348 (356)
Q Consensus 274 ~~~~g~~~~~~~~~~~-~~~~~~~~-~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~ 348 (356)
.+... . .+.... .....+.. .||.+... ..+..+++++-. .+++.+.++...+ | ...+.....++.+.+
T Consensus 354 ~~~~~-~---~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~-~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~ 427 (522)
T TIGR03799 354 AIEHH-A---EYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGR-KGYELLIDQSIEKAKYFADLIQQQPDFELVTE 427 (522)
T ss_pred HhccC-c---chhcCCCCCccccceeecCcchHH-HHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC
Confidence 00000 0 000000 00000111 25555444 357888988855 3565555444433 2 233444455665554
No 126
>PRK07324 transaminase; Validated
Probab=99.78 E-value=4.7e-18 Score=161.98 Aligned_cols=199 Identities=20% Similarity=0.157 Sum_probs=135.4
Q ss_pred cCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC-CCCCccccCCCchHHHH
Q 018401 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g-~~~~~v~v~~sgs~a~~ 123 (356)
+.++|..++. ++|+.+ +++.+++.... .+|. ...+..+++ +.++++++ ++++++++|+|+++++.
T Consensus 27 ~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~-~~Y~------~~~G~~~lr----~~ia~~~~~~~~~~vi~t~G~~~al~ 94 (373)
T PRK07324 27 CIDSLTLEELLALAGKNP-EAFYQELGQKK-LTYG------WIEGSPEFK----EAVASLYQNVKPENILQTNGATGANF 94 (373)
T ss_pred CCCCCcHHHHHhccCcch-HHHHHHHhcCC-ccCC------CCCCCHHHH----HHHHHHhcCCChhhEEEcCChHHHHH
Confidence 4566665555 346666 77777776521 1332 223455565 56666554 67888888999999999
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC-CCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TGYIDYDQLEKSATLFRPKLIVAG-AS 201 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~i~~~~~k~v~l~-~~ 201 (356)
.++.+++++||+|+++.+.|..+ ...+...|.+++.++ .+.+ ++.+|++++++++.+ ++|+|+++ ++
T Consensus 95 ~~~~~l~~~gd~Vl~~~P~y~~~--------~~~~~~~g~~v~~v~--~~~~~~~~~d~~~l~~~~~~-~~kli~i~~p~ 163 (373)
T PRK07324 95 LVLYALVEPGDHVISVYPTYQQL--------YDIPESLGAEVDYWQ--LKEENGWLPDLDELRRLVRP-NTKLICINNAN 163 (373)
T ss_pred HHHHHhCCCCCEEEEcCCCchhH--------HHHHHHcCCEEEEEe--cccccCCCCCHHHHHHhCCC-CCcEEEEeCCC
Confidence 89999999999999988555433 223445676666564 4432 356899999998876 89999998 88
Q ss_pred C-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCC--CCCccEEEeCCCCcCC--CCCceEEEEec
Q 018401 202 A-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP--FEYADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 202 n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~--l~~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
| ||.+.+ +++|+++|++||+++|+|+++. +.......... ...-.+.+.|++|+++ |.+-|+++.++
T Consensus 164 NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~-~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~ 238 (373)
T PRK07324 164 NPTGALMDRAYLEEIVEIARSVDAYVLSDEVYR-PLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANE 238 (373)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc-ccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCH
Confidence 8 898887 8889999999999999999963 22211100000 0112477889999874 33339988865
No 127
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=5.7e-18 Score=161.18 Aligned_cols=235 Identities=11% Similarity=0.034 Sum_probs=156.3
Q ss_pred CCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHHHH
Q 018401 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPSNF 123 (356)
Q Consensus 48 ~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a~~ 123 (356)
.++|..++++ +|+.+++++.+.+.... . ....|+. .+...+++++.+++.+.+|. ++++|++|+|+++++.
T Consensus 28 ~i~l~~~~~~~~~~~~~~~al~~~l~~~~--~--~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~ 102 (368)
T PRK03317 28 PVRLNTNENPYPPSPALVADIAEAVAEAA--A--GLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQ 102 (368)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhhh--h--hhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHH
Confidence 5888888875 57889999988765310 0 0112221 23567887777777777664 7788888999999999
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
.++.++++|||.|+++.|+|..+ ...+...|.++ ++++.+ +++.+|++++++++.+.++++|+++ |+|
T Consensus 103 ~~~~~~~~~gd~v~v~~P~y~~~--------~~~~~~~g~~~--~~~~~~-~~~~~d~~~l~~~~~~~~~~~i~l~~p~N 171 (368)
T PRK03317 103 QLLQAFGGPGRTALGFVPSYSMH--------PIIARGTHTEW--VEGPRA-ADFTLDVDAAVAAIAEHRPDVVFLTSPNN 171 (368)
T ss_pred HHHHHhcCCCCEEEEeCCChHHH--------HHHHHhcCCee--EEcccC-CCCCCCHHHHHHHHhccCCCEEEEeCCCC
Confidence 89999999999999999655433 22333455444 444444 4568899999999875578988887 777
Q ss_pred -CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCC-C--CccEEEeCCCCcCCCC--CceEEEEecCcchhcc
Q 018401 203 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-E--YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINK 276 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l-~--~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~ 276 (356)
+|...+.+++.++++.+++++|+|++|+.-..........+ . .-.+++.|++|.++.| +-|+++.++
T Consensus 172 PtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~------- 244 (368)
T PRK03317 172 PTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP------- 244 (368)
T ss_pred CCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH-------
Confidence 99999999999999999999999999863211100000000 0 1236777999987533 338888876
Q ss_pred CCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 277 QGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 277 ~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
++.+.+.....+ + +.+.+..+++.++++.
T Consensus 245 -------~~~~~l~~~~~~--~-~~s~~~~~a~~~~l~~ 273 (368)
T PRK03317 245 -------AVVDALRLVRLP--Y-HLSAVTQAAARAALRH 273 (368)
T ss_pred -------HHHHHHHhcCCC--C-CCCHHHHHHHHHHhhC
Confidence 455555432211 2 3344555555556643
No 128
>PRK08363 alanine aminotransferase; Validated
Probab=99.78 E-value=1.5e-17 Score=159.96 Aligned_cols=204 Identities=16% Similarity=0.132 Sum_probs=142.4
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC--CCCCccccCCCch
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGGSLSGS 119 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~v~v~~sgs 119 (356)
..|+|..+.+ ++++.+.+++.+.+.... .+|+...+..++++++.+++.+.+| ++++++++++|++
T Consensus 31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 103 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGH-------NYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVT 103 (398)
T ss_pred CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCC-------CCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHH
Confidence 4688887765 468889999988775421 1233335567888888888877766 4778888899999
Q ss_pred HHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 018401 120 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 199 (356)
Q Consensus 120 ~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~ 199 (356)
+++..++.+++++||.|++++++|.++.. .+...|.....++ +.+.+++.+|++++++++.+ ++++|+++
T Consensus 104 ~al~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~v~~~-~~~~~~~~~d~~~l~~~~~~-~~~~v~l~ 173 (398)
T PRK08363 104 EALQLIFGALLDPGDEILIPGPSYPPYTG--------LVKFYGGVPVEYR-TIEEEGWQPDIDDIRKKITE-KTKAIAVI 173 (398)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCCEEEEec-cccccCCcCCHHHHHhhCCc-ceEEEEEE
Confidence 99998999999999999999977655532 3334554443331 33334457899999999876 78998887
Q ss_pred -CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCC-CCCCC--ccEEEeCCCCcCCCC--CceEEEE
Q 018401 200 -ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFEY--ADVVTTTTHKSLRGP--RGAMIFF 267 (356)
Q Consensus 200 -~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~-~~l~~--~D~~~~s~~K~l~gp--~gG~l~~ 267 (356)
++| +|...+ +++|.++|+++|+++|+|+++..-........ ..+.. --+++.|.+|+++.| +-|++++
T Consensus 174 ~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~ 251 (398)
T PRK08363 174 NPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYF 251 (398)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEE
Confidence 877 897776 88899999999999999999753221110000 01111 236688999986433 3399887
No 129
>PLN02721 threonine aldolase
Probab=99.78 E-value=5.3e-18 Score=160.23 Aligned_cols=200 Identities=17% Similarity=0.125 Sum_probs=131.9
Q ss_pred CCeeecCCCC-CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHH
Q 018401 48 GLELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVY 126 (356)
Q Consensus 48 ~i~L~~~~~~-~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l 126 (356)
.++|..++++ +++.+++++...... ....+|. ... .++++.+++++|.+. .+++++|++++..++
T Consensus 7 ~~~~~~~~~~~~~~~~~~a~~~~~~~------~~~~~~~--~~~----~~l~~~la~~~~~~~--~~~~~~Gs~a~~~~l 72 (353)
T PLN02721 7 VVDLRSDTVTKPTDAMRAAMANAEVD------DDVLGYD--PTA----LRLEEEMAKIFGKEA--ALFVPSGTMGNLISV 72 (353)
T ss_pred hhhhhcccccCCCHHHHHHHHhccCC------CcccCCC--HHH----HHHHHHHHHHhCCce--eEEecCccHHHHHHH
Confidence 4677766664 577888888653111 0111221 112 345688899999864 355677787777777
Q ss_pred HhhcC-CCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh------cCCcEEEEc
Q 018401 127 TALLK-PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL------FRPKLIVAG 199 (356)
Q Consensus 127 ~al~~-~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~------~~~k~v~l~ 199 (356)
.++++ +||+|++++++|.+....+. .+...|.+++.+ +.+ +++.+|++++++++.+ .++++|+++
T Consensus 73 ~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~ 144 (353)
T PLN02721 73 LVHCDVRGSEVILGDNSHIHLYENGG-----ISTLGGVHPRTV--KNN-EDGTMDLDAIEAAIRPKGDDHFPTTRLICLE 144 (353)
T ss_pred HHHccCCCCeEEEcCccceehhcccc-----hhhhcCceeEec--CCC-cCCCcCHHHHHHHHHhccCCCCCcceEEEEe
Confidence 87777 99999999987754332110 123346555545 444 4567899999999973 278899886
Q ss_pred -C-CC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcc-cCCCCCC-CCCccEEEeCCCCcCCCCCceEEEEec
Q 018401 200 -A-SA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSP-FEYADVVTTTTHKSLRGPRGAMIFFRK 269 (356)
Q Consensus 200 -~-~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~-~~~~~~~-l~~~D~~~~s~~K~l~gp~gG~l~~~~ 269 (356)
+ +| +|...| +++|.++|+++|+++|+|++|..+... .+..... ..++|.+++++||++++|.|++++.++
T Consensus 145 ~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~ 222 (353)
T PLN02721 145 NTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSK 222 (353)
T ss_pred ccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCH
Confidence 3 44 566665 789999999999999999998765421 1111111 125899999999999887766566555
No 130
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=3.4e-18 Score=163.92 Aligned_cols=156 Identities=21% Similarity=0.178 Sum_probs=115.6
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
+.+++.++++.|.+.. ++++||++++.+++.++++|||+|+++.+.|++....... .....|..+..+ +.
T Consensus 63 ~~Le~~lA~l~g~~~~--v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~----~~~~~g~~v~~v--~~-- 132 (405)
T PRK08776 63 DLLGEALAELEGGAGG--VITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNA----LAKKGHFALITA--DL-- 132 (405)
T ss_pred HHHHHHHHHHhCCCce--EEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHH----HHHhcCcEEEEE--CC--
Confidence 3455889999998543 4577788888888999999999999998777654321111 111224333333 22
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
.|++++++++++ ++|+|+++ ++| +|.+.++++|.++|+++|+++|+|++|+.+.....+ .. ++|++++|
T Consensus 133 ----~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl-~~---gaDivv~S 203 (405)
T PRK08776 133 ----TDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPL-EF---GADLVLHS 203 (405)
T ss_pred ----CCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCcc-cc---cCCEEEec
Confidence 378999999876 89999987 878 899999999999999999999999999765432111 12 48999999
Q ss_pred CCCcCCCCC---ceEEEEec
Q 018401 253 THKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 253 ~~K~l~gp~---gG~l~~~~ 269 (356)
+||+++|+. ||++++++
T Consensus 204 ~tK~l~g~~~~~~G~vv~~~ 223 (405)
T PRK08776 204 TTKYINGHSDVVGGAVVARD 223 (405)
T ss_pred CceeecCCCCceEEEEEeCC
Confidence 999998875 47776655
No 131
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.78 E-value=2.7e-18 Score=164.61 Aligned_cols=156 Identities=19% Similarity=0.201 Sum_probs=118.7
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++++.+++++|.+. .++++||+.++..++.+++++||+|+++...|++.+.. +...+...|+.++.+ +.
T Consensus 74 ~le~~lA~l~g~~~--al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~----~~~~~~~~G~~v~~v--d~--- 142 (403)
T PRK07810 74 MFEERLRLIEGAEA--CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVV----CNEILPRWGVETVFV--DG--- 142 (403)
T ss_pred HHHHHHHHHhCCCc--EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHH----HHHHHHHcCcEEEEE--CC---
Confidence 34488899999763 35688999998888889999999999988666544322 122233346555444 22
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
.|++++++++++ ++++|+++ ++| +|.+.|+++|+++|+++|+++|+|++|+.+.....+ .. ++|++++|+
T Consensus 143 ---~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~-~~---gaDivv~S~ 214 (403)
T PRK07810 143 ---EDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRGL-PL---GADVVVYSG 214 (403)
T ss_pred ---CCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCChh-hc---CCcEEEccC
Confidence 389999999987 89999987 887 899999999999999999999999999876553222 22 489999999
Q ss_pred CCcCCCCC---ceEEEEecC
Q 018401 254 HKSLRGPR---GAMIFFRKG 270 (356)
Q Consensus 254 ~K~l~gp~---gG~l~~~~~ 270 (356)
+|+++|.. ||+++.+++
T Consensus 215 tK~l~g~g~~~gG~v~~~~~ 234 (403)
T PRK07810 215 TKHIDGQGRVLGGAILGDRE 234 (403)
T ss_pred CceecCCcCceeEEEEeChH
Confidence 99997754 577777763
No 132
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=2.6e-18 Score=163.47 Aligned_cols=154 Identities=19% Similarity=0.166 Sum_probs=117.4
Q ss_pred HHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCC
Q 018401 97 CQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 176 (356)
Q Consensus 97 ~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 176 (356)
+++.++++.|. +++++++||++++..++.+++++||+|+++.+.|++.+..+... ....|..+..+ +
T Consensus 58 Le~~lA~leg~--e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~----~~~~gi~v~~v--d----- 124 (388)
T PRK08861 58 LEQTLSELESG--KGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTR----ANKGDFKVQFV--D----- 124 (388)
T ss_pred HHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHH----HhcCCeEEEEE--C-----
Confidence 44888999985 45677999999999899999999999999998877554322111 11123333222 2
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCC
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 254 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~ 254 (356)
..|++++++++++ ++++|+++ |+| +|.+.|+++|.++|+++|+++|+|++++.+.....+ .. ++|+++.|+|
T Consensus 125 -~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl-~~---GaDivv~S~t 198 (388)
T PRK08861 125 -QSDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPL-EL---GADFVIHSTT 198 (388)
T ss_pred -CCCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCCc-cc---CCCEEEeecc
Confidence 2488999999987 89999997 878 899999999999999999999999999876543221 12 4999999999
Q ss_pred CcCCCCC---ceEEEEec
Q 018401 255 KSLRGPR---GAMIFFRK 269 (356)
Q Consensus 255 K~l~gp~---gG~l~~~~ 269 (356)
||++||. ||+++.++
T Consensus 199 K~l~G~~d~~gG~i~~~~ 216 (388)
T PRK08861 199 KYINGHSDVIGGVLITKT 216 (388)
T ss_pred eeccCCCcceeEEEEecH
Confidence 9999986 47776655
No 133
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=1.4e-17 Score=157.40 Aligned_cols=199 Identities=13% Similarity=0.096 Sum_probs=140.3
Q ss_pred CCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHH
Q 018401 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 48 ~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~ 125 (356)
.++|..++++ +|+.+++++.+.+......+|+.. .. ..+|+.++++++++++++++++|+++++..+
T Consensus 24 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~~-------~~----~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~ 92 (351)
T PRK14807 24 KYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPDP-------TA----EKLREELARYCSVVPTNIFVGNGSDEIIHLI 92 (351)
T ss_pred eeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCCc-------cH----HHHHHHHHHHhCCCcccEEEecCHHHHHHHH
Confidence 4677777775 689999999887753221122211 12 3455888888999988888898888988888
Q ss_pred HHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-C
Q 018401 126 YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-Y 203 (356)
Q Consensus 126 l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~ 203 (356)
+.++++|||+|++++++|..+ ...+...|.+++.+ +.+ +++.+|++++++++++.++|+|+++ ++| |
T Consensus 93 ~~~l~~~gd~Vlv~~p~y~~~--------~~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPt 161 (351)
T PRK14807 93 MLAFINKGDVVIYPHPSFAMY--------SVYSKIAGAVEIPV--KLK-EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPT 161 (351)
T ss_pred HHHhcCCCCEEEEeCCChHHH--------HHHHHHcCCeEEEe--ecC-CCCCCCHHHHHHHhhccCCCEEEEeCCCCCC
Confidence 888999999999998655432 22334566666555 455 4467999999999875579999887 888 9
Q ss_pred CCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCC-CCCCCccEEEeCCCCcCC--CCCceEEEEec
Q 018401 204 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFEYADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 204 g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~-~~l~~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
|...+.+++.++|++++.++|+|+++. +........ .....-.+++.|.+|.++ |.+-|+++.++
T Consensus 162 G~~~~~~~l~~l~~~~~~~~ivDe~y~-~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~ 229 (351)
T PRK14807 162 GSVIEREDIIKIIEKSRGIVVVDEAYF-EFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANE 229 (351)
T ss_pred CCCCCHHHHHHHHHhCCCEEEEeCcch-hhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecCH
Confidence 999999999999999888999999984 221111100 000013588999999773 33339988766
No 134
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.77 E-value=2.8e-17 Score=158.19 Aligned_cols=206 Identities=13% Similarity=0.002 Sum_probs=141.8
Q ss_pred HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHH
Q 018401 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPS 121 (356)
Q Consensus 46 ~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a 121 (356)
.+.++|..+.+. +++.+.+++.+.+.... ..|+...+..++++++++++++.+|. .++++++|+|++++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 105 (402)
T PRK06107 33 RSIVDLTVGEPDFDTPDHIKQAAVAAIERGE-------TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQA 105 (402)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHHcCC-------CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence 356888876664 46888888888776421 12344456678888999999998887 56788889899999
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEEc-
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~l~- 199 (356)
+..++.+++++||.|+++++.|..+.. .+...+.....+ +.+. +++.+|++++++++.+ ++++|+++
T Consensus 106 l~~~~~~~~~~gd~vl~~~p~y~~y~~--------~~~~~~~~~~~v--~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~ 174 (402)
T PRK06107 106 IFLALMATLEAGDEVIIPAPYWVSYPD--------MVLANDGTPVIV--ACPEEQGFKLTPEALEAAITP-RTRWLILNA 174 (402)
T ss_pred HHHHHHHhcCCCCEEEEecCCCcCHHH--------HHHHcCCEEEEe--cCCcccCCCCCHHHHHhhcCc-CceEEEEEC
Confidence 888888889999999999976654422 223344444344 4432 3457899999998876 78888887
Q ss_pred CCC-CCCccc---HHHHHHHHHHc-CCEEEEeccchhhhccc----CCCCC-C-CCCccEEEeCCCCcCCCCCc--eEEE
Q 018401 200 ASA-YARLYD---YERIRKVCNKQ-KAIMLADMAHISGLVAA----GVIPS-P-FEYADVVTTTTHKSLRGPRG--AMIF 266 (356)
Q Consensus 200 ~~n-~g~~~~---l~~I~~la~~~-g~~vivD~a~~~g~~~~----~~~~~-~-l~~~D~~~~s~~K~l~gp~g--G~l~ 266 (356)
|+| +|...+ +++|+++|+++ ++++|+|++++.-.... .+... + ...--+++.|.+|.++.|.- |+++
T Consensus 175 p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~ 254 (402)
T PRK06107 175 PSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAA 254 (402)
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeee
Confidence 888 897775 56777888998 99999999875211110 00000 0 01134778888998743332 9988
Q ss_pred Eec
Q 018401 267 FRK 269 (356)
Q Consensus 267 ~~~ 269 (356)
.++
T Consensus 255 ~~~ 257 (402)
T PRK06107 255 GPA 257 (402)
T ss_pred cCH
Confidence 776
No 135
>PLN02231 alanine transaminase
Probab=99.77 E-value=2.8e-17 Score=162.53 Aligned_cols=226 Identities=12% Similarity=0.051 Sum_probs=154.6
Q ss_pred cccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC
Q 018401 28 EVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL 107 (356)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~ 107 (356)
.+.++..++.+... ....+.|+|..+....|..++++..+.+.... + .....|+...+..++++++.+++.+..|.
T Consensus 112 ~~~~~~~~r~v~~~-~~~p~~i~~~~~~~~fp~~~i~~a~~~l~~~~--~-~~~~~Y~~s~G~~~lReaIA~~~~~r~g~ 187 (534)
T PLN02231 112 GQQPITFFREVLAL-CDHPSLLDKSETHGLFSADAIERAWQILDQIP--G-RATGAYSHSQGIKGLRDAIAAGIEARDGF 187 (534)
T ss_pred CCCccHHHHHHHHh-ccCCccCCCCCccccCCHHHHHHHHHHHHhcC--C-ccccCcCCCCCcHHHHHHHHHHHHhccCC
Confidence 44566666666664 23346788876666667788888877765421 1 11223556677889999999999887775
Q ss_pred --CCCccccCCCchHHHHHHHHhhc-CCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC-CCCCCHHH
Q 018401 108 --DPEKWGGSLSGSPSNFQVYTALL-KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TGYIDYDQ 183 (356)
Q Consensus 108 --~~~~v~v~~sgs~a~~~~l~al~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~ 183 (356)
++++|++|+|+++++..++++++ .+||.|+++.|.|..+ ...+...|+.++.+ +++.+ ++.+|+++
T Consensus 188 ~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y--------~~~~~~~g~~~v~~--~l~~~~~~~~d~~~ 257 (534)
T PLN02231 188 PADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLY--------SASIALHGGTLVPY--YLDEATGWGLEISE 257 (534)
T ss_pred CCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhH--------HHHHHHcCCEEEEE--ecCcccCCCCCHHH
Confidence 77888889999999998899887 4899999999555433 33455667666555 55533 46899999
Q ss_pred HHHHhhhc-----CCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCC---------CCCC
Q 018401 184 LEKSATLF-----RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP---------SPFE 244 (356)
Q Consensus 184 l~~~i~~~-----~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~---------~~l~ 244 (356)
|++++++. ++|+++++ |+| ||.+.+ +++|.++|+++|++||+|+++.--....+... .+..
T Consensus 258 Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~ 337 (534)
T PLN02231 258 LKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYG 337 (534)
T ss_pred HHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccc
Confidence 99988642 57877776 888 997765 66888899999999999999753222111000 0100
Q ss_pred --Cc-cEEEeCCCCcCC---CCCceEEEE
Q 018401 245 --YA-DVVTTTTHKSLR---GPRGAMIFF 267 (356)
Q Consensus 245 --~~-D~~~~s~~K~l~---gp~gG~l~~ 267 (356)
.. -+.+.|.+|.+. |-++|++.+
T Consensus 338 ~~~~~vi~l~S~SK~~~g~pGlRiGy~~~ 366 (534)
T PLN02231 338 EKDISLVSFQSVSKGYYGECGKRGGYMEV 366 (534)
T ss_pred cCCceEEEEeccCcccccCCccceEEEEE
Confidence 11 256679999653 666698876
No 136
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.77 E-value=1.7e-17 Score=157.94 Aligned_cols=186 Identities=15% Similarity=0.093 Sum_probs=132.8
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCCCe
Q 018401 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPHDR 135 (356)
Q Consensus 57 ~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~gd~ 135 (356)
..+++.++++.+.+.+.+. ++. ..+.+++.+++++++|++ ++++++||++++..++.++ ++|||+
T Consensus 8 ~~~~~e~~a~~~~~~~~~~--------~~~----g~~~~~~e~~la~~~g~~--~~v~~~sgt~aL~~~l~al~~~pGd~ 73 (376)
T TIGR02379 8 PVTGQELEYIAEAISEGKL--------SGD----GPFSRRCETWLENRTGTK--KALLTPSCTAALEMAALLLDIQPGDE 73 (376)
T ss_pred CCCHHHHHHHHHHHHcCCc--------cCC----cHHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcCCCCcCE
Confidence 3567778888888876321 110 123345558888888875 4566999999988788887 899999
Q ss_pred eeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHH
Q 018401 136 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKV 215 (356)
Q Consensus 136 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~l 215 (356)
|++++++|.+... .+...|++++.+ +++++++.+|++++++++++ ++|+|+.+. .+|...++++|.++
T Consensus 74 Viv~~~t~~~~~~--------~~~~~G~~~v~v--d~d~~~~~~d~~~le~~i~~-~tk~Iip~~-~~G~~~d~~~I~~l 141 (376)
T TIGR02379 74 VIMPSYTFVSTAN--------AFVLRGAKIVFV--DIRPDTMNIDETLIESAITH-RTKAIVPVH-YAGVACDMDTIMAL 141 (376)
T ss_pred EEECCCCcHHHHH--------HHHHcCCEEEEE--ecCCCcCCCCHHHHHHhcCc-CceEEEEeC-CCCCccCHHHHHHH
Confidence 9999988876644 233457666555 66645568999999999987 899987542 27889999999999
Q ss_pred HHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCC--cC-CCCCceEEEEecC
Q 018401 216 CNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHK--SL-RGPRGAMIFFRKG 270 (356)
Q Consensus 216 a~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K--~l-~gp~gG~l~~~~~ 270 (356)
|+++|++||+|++|+.|....+. ..+ ...|+.++|+|+ .+ .|+.||+++++++
T Consensus 142 a~~~~i~vIeDaa~~~g~~~~~~-~~g-~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~ 197 (376)
T TIGR02379 142 ANKHQLFVIEDAAQGVMSTYKGR-ALG-SIGHLGTFSFHETKNYTSGGEGGALLINDQ 197 (376)
T ss_pred HHHCCCEEEEECccccCCccCCc-ccC-CCCCEEEEeCCCCCcCcccCCceEEEECCH
Confidence 99999999999999988642221 111 013666666654 44 4568888888753
No 137
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.77 E-value=5e-18 Score=161.26 Aligned_cols=159 Identities=12% Similarity=0.026 Sum_probs=117.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEE
Q 018401 88 EYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 167 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 167 (356)
+....++ +.++++.|.+ ++++++||++|+..++.++++|||+|+++++.|++..... .......|+.+..
T Consensus 50 Pt~~~lE----~~lA~l~g~~--~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~----~~~~~~~gi~v~~ 119 (377)
T TIGR01324 50 LTHFALQ----DAMCELEGGA--GCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFC----DIVLKRMGVDITY 119 (377)
T ss_pred ccHHHHH----HHHHHHhCCC--cEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHH----HHHHHhcCcEEEE
Confidence 3345555 8888888875 3466889999999899999999999999987765432110 0011223444433
Q ss_pred EecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCC
Q 018401 168 MPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEY 245 (356)
Q Consensus 168 v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~ 245 (356)
+ +.. +.+++++++++ ++|+|+++ ++| +|.+.|+++|+++|+++|+++++|++|+.|..... ... +
T Consensus 120 ~--d~~------~~e~l~~~i~~-~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~p-l~~---g 186 (377)
T TIGR01324 120 Y--DPL------IGEDIATLIQP-NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFKP-LEH---G 186 (377)
T ss_pred E--CCC------CHHHHHHhcCC-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCc-ccc---C
Confidence 3 221 23788888887 89999998 777 88999999999999999999999999998876321 223 4
Q ss_pred ccEEEeCCCCcCCCCCc---eEEEEec
Q 018401 246 ADVVTTTTHKSLRGPRG---AMIFFRK 269 (356)
Q Consensus 246 ~D~~~~s~~K~l~gp~g---G~l~~~~ 269 (356)
+|+++.|++|+++|+.+ |+++.++
T Consensus 187 aDivv~S~tK~l~G~~d~~gG~v~~~~ 213 (377)
T TIGR01324 187 VDISIQAGTKYLVGHSDIMIGTVVANA 213 (377)
T ss_pred ceEEEecCceeccCCCCceEEEEEeCH
Confidence 99999999999988754 7777665
No 138
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.77 E-value=2.6e-17 Score=159.33 Aligned_cols=159 Identities=19% Similarity=0.272 Sum_probs=119.8
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh---------cCCCCeeeecCCCCCcccCcccccccccccccceeeE
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL---------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 166 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al---------~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 166 (356)
++++.+++++|++. +++++||++++..++.++ ++|||+|++++++|.++.. .+...|..++
T Consensus 67 ~fe~~lA~~~g~~~--~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~--------~v~~~G~~pv 136 (438)
T PRK15407 67 AFEKKLAEFLGVRY--ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVN--------PIIQNGLVPV 136 (438)
T ss_pred HHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHH--------HHHHcCCEEE
Confidence 44588899999863 456889998888777765 5899999999988876654 2334565554
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCc
Q 018401 167 TMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYA 246 (356)
Q Consensus 167 ~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~ 246 (356)
.+ +++.+++.+|++.+++++++ ++++|++++. +|...++++|.++|+++|++||+|++|+.|....+.....+ .
T Consensus 137 ~v--dvd~~~~~id~~~le~~i~~-~tkaVi~~~~-~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~--g 210 (438)
T PRK15407 137 FV--DVELPTYNIDASLLEAAVSP-KTKAIMIAHT-LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTF--G 210 (438)
T ss_pred EE--ecCCCcCCcCHHHHHHHcCc-CCeEEEEeCC-CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeecc--C
Confidence 44 56545678999999999987 8999888732 67778999999999999999999999999987755322222 2
Q ss_pred cEEEeCC--CCcCCCCCceEEEEecC
Q 018401 247 DVVTTTT--HKSLRGPRGAMIFFRKG 270 (356)
Q Consensus 247 D~~~~s~--~K~l~gp~gG~l~~~~~ 270 (356)
|+.++|+ .|.+.+..||+++++++
T Consensus 211 d~~~fSf~~~k~~~~geGG~l~t~d~ 236 (438)
T PRK15407 211 DIATLSFYPAHHITMGEGGAVFTNDP 236 (438)
T ss_pred ceEEEeCCCCCCccccCceEEEECCH
Confidence 5555554 56676666899999885
No 139
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.77 E-value=5e-18 Score=162.93 Aligned_cols=155 Identities=15% Similarity=0.165 Sum_probs=116.5
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.+++.+++++|+++. ++++||++++..++.++++|||+|+++.+.|++..... ...+...|+.++.+ +.
T Consensus 69 ~le~~lA~l~g~~~~--i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~----~~~~~~~G~~v~~v--d~--- 137 (403)
T PRK07503 69 LLEQRMASLEGGEAA--VALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFL----HHGLGEFGVTVRHV--DL--- 137 (403)
T ss_pred HHHHHHHHHhCCCcE--EEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHH----HHHHhhCCEEEEEe--CC---
Confidence 455889999998754 45778898888888888999999999987775443211 11223346555444 33
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
.|++++++++++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+.....+ .. ++|++++|+
T Consensus 138 ---~d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l-~~---g~Di~v~S~ 209 (403)
T PRK07503 138 ---TDPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPL-EL---GADLVVHSA 209 (403)
T ss_pred ---CCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch-hh---CCCEEEccc
Confidence 278999999987 89999997 777 899999999999999999999999999766432111 12 489999999
Q ss_pred CCcCCCCC---ceEEEEec
Q 018401 254 HKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp~---gG~l~~~~ 269 (356)
+|+++|+. ||+++.++
T Consensus 210 tK~l~g~gd~~gG~v~~~~ 228 (403)
T PRK07503 210 TKYLGGHGDITAGLVVGGK 228 (403)
T ss_pred cccccCCCceeEEEEEcCH
Confidence 99998764 57777544
No 140
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.77 E-value=6.6e-17 Score=155.70 Aligned_cols=228 Identities=17% Similarity=0.144 Sum_probs=148.4
Q ss_pred ccccChHHHHHHHHHHHH----HHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHH
Q 018401 27 LEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (356)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 100 (356)
+....++.+..+.+.... ..+.++|..+... +|+.+.+++.+.+..... ..|+...+...++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lR~~ia~~ 83 (403)
T PRK08636 10 IKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKT------HGYSVSKGIYKLRLAICNW 83 (403)
T ss_pred HHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCcc------CCCCCCCCCHHHHHHHHHH
Confidence 344555555555544322 2356788755443 467778887765543111 2233345667888889999
Q ss_pred HHHHcCC--CCC-ccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCC
Q 018401 101 ALEAFRL--DPE-KWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 177 (356)
Q Consensus 101 la~~~g~--~~~-~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 177 (356)
+.+.+|. +++ ++++|+|+++++..++.++++|||.|++++|+|..+ ...+...|+++..++++.+ +++
T Consensus 84 l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~--------~~~~~~~g~~~~~v~~~~~-~~~ 154 (403)
T PRK08636 84 YKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIH--------SQAFILAGGNVHKMPLEYN-EDF 154 (403)
T ss_pred HHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcch--------HHHHHhcCCEEEEEecccc-ccC
Confidence 9888885 666 687899999999989999999999999999665444 3345566777766654333 345
Q ss_pred CCCHHH----HHHHhhh--cCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC-CCC-CCCC
Q 018401 178 YIDYDQ----LEKSATL--FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-VIP-SPFE 244 (356)
Q Consensus 178 ~~d~~~----l~~~i~~--~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~-~~~-~~l~ 244 (356)
.+|++. +++++.+ .++++++++ |+| ||.+.+ +++|.++|++|++++|+|+++..-..... ... ..++
T Consensus 155 ~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~ 234 (403)
T PRK08636 155 ELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVE 234 (403)
T ss_pred ccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCC
Confidence 788775 4555543 267888888 788 897766 56778889999999999999753221110 000 1111
Q ss_pred ---CccEEEeCCCCcCC--CCCceEEEEec
Q 018401 245 ---YADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 245 ---~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
...+.+.|.+|.++ |.+.|+++.++
T Consensus 235 ~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~ 264 (403)
T PRK08636 235 GAKDVAVESYTLSKSYNMAGWRVGFVVGNK 264 (403)
T ss_pred CccccEEEEEecccccCCccceeeeeeCCH
Confidence 12355789999873 44449988766
No 141
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.77 E-value=4.9e-18 Score=162.36 Aligned_cols=155 Identities=14% Similarity=0.139 Sum_probs=117.8
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.+++.+++++|++.. ++++||++++..++.+++++||+|+++.+.|++.+.... ..+...|+.+..+ +.+
T Consensus 63 ~le~~lA~l~g~~~a--v~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~----~~~~~~G~~~~~v--d~~-- 132 (391)
T TIGR01328 63 NLEGRIAFLEGTEAA--VATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLE----HALTKFGIQVDFI--NMA-- 132 (391)
T ss_pred HHHHHHHHHhCCCcE--EEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHH----HHHhcCCeEEEEE--CCC--
Confidence 344889999998764 558888999988888999999999999877765432211 1222345555444 332
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
|++++++++.+ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+.....+ .. ++|++++|+
T Consensus 133 ----d~e~l~~~i~~-~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~~-~~---g~Divv~S~ 203 (391)
T TIGR01328 133 ----IPEEVKAHIKD-NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNPV-AL---GVDVVVHSA 203 (391)
T ss_pred ----CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCCch-hc---CCCEEEccc
Confidence 78999999887 89999987 777 899999999999999999999999999876543221 12 489999999
Q ss_pred CCcCCCCC---ceEEEEec
Q 018401 254 HKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp~---gG~l~~~~ 269 (356)
+|+++|+. ||+++.++
T Consensus 204 sK~lgg~g~~~gG~v~~~~ 222 (391)
T TIGR01328 204 TKYIGGHGDVVAGLICGKA 222 (391)
T ss_pred cccccCCCCceEEEEEcCH
Confidence 99998765 47776665
No 142
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.77 E-value=3.9e-18 Score=163.43 Aligned_cols=155 Identities=17% Similarity=0.180 Sum_probs=117.2
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.+++.+++++|+++. .++++|+.++..++.++++|||+|+++.+.|+++...+.. .....|+.+..+ +
T Consensus 69 ~Le~~lA~l~G~~~~--~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~----~~~~~G~~v~~v----d-- 136 (398)
T PRK07504 69 MFEKRMCALEGAEDA--RATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVET----LLPRYGIESTLV----D-- 136 (398)
T ss_pred HHHHHHHHHhCCCee--eEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHH----HHhhcCeEEEEE----C--
Confidence 455889999999876 3477888888877888899999999999877765432211 112235444333 2
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
.+|++++++++++ +||+|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+..... ... ++|++++|+
T Consensus 137 --~~d~e~l~~ai~~-~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~-~~~---gaDivv~S~ 209 (398)
T PRK07504 137 --GLDLDNWEKAVRP-NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQKP-LEL---GAHIVVYSA 209 (398)
T ss_pred --CCCHHHHHHhcCc-CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCCc-hhh---CCCEEEeec
Confidence 3689999999987 89999998 777 89999999999999999999999999987654311 122 489999999
Q ss_pred CCcCCCCC---ceEEEEec
Q 018401 254 HKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp~---gG~l~~~~ 269 (356)
||+++|+. ||+++.++
T Consensus 210 sK~l~g~g~~~GG~vv~~~ 228 (398)
T PRK07504 210 TKHIDGQGRCLGGVVLSDK 228 (398)
T ss_pred cccccCCccceEEEEEeCc
Confidence 99998754 46777665
No 143
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.77 E-value=3.8e-17 Score=156.86 Aligned_cols=248 Identities=14% Similarity=0.105 Sum_probs=168.2
Q ss_pred CeeecCCCCC----cHHHHHHHHhhhhccCCCCCCCCccCCCchh-HHHHHHHHHHHHHHHcCCCCCccccCCCchHHHH
Q 018401 49 LELIPSENFT----SVSVMQAVGSVMTNKYSEGYPGARYYGGNEY-IDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 49 i~L~~~~~~~----~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~ 123 (356)
+++ ++.+++ .|.++++..+.+.. |..+..+++...|+.. ..++| +.+++++|.+.. ++.++|..+|.
T Consensus 105 l~F-sSndYLGL~~~p~v~~a~~~ai~~-yG~g~~gSrl~~G~~~~h~~LE----~~LA~f~g~e~a--ll~sSGy~AN~ 176 (476)
T PLN02955 105 LLF-SGNDYLGLSSHPTISNAAANAAKE-YGMGPKGSALICGYTTYHRLLE----SSLADLKKKEDC--LVCPTGFAANM 176 (476)
T ss_pred EEe-eccCccCCCCCHHHHHHHHHHHHH-cCCCCCCcCccccChHHHHHHH----HHHHHHHCCCcE--EEECChHHHHH
Confidence 444 555564 79999999999876 6556666666555433 34444 899999998875 56889999999
Q ss_pred HHHHhhc--------------CCCCeeeecCCCCCcccCccccccccccccc----ceeeEEEecccCCCCCCCCHHHHH
Q 018401 124 QVYTALL--------------KPHDRIMALDLPHGGHLSHGYQTDTKKISAV----SIFFETMPYRLNESTGYIDYDQLE 185 (356)
Q Consensus 124 ~~l~al~--------------~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~~d~~~l~ 185 (356)
.++.++. .++|.|++....|.+... ++.+. +..+ +.++.+ |+++|+
T Consensus 177 ~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~d--------G~~ls~~~~~a~~--~~f~HN------D~~~Le 240 (476)
T PLN02955 177 AAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID--------GVRLAERQGNVEV--FVYRHC------DMYHLN 240 (476)
T ss_pred HHHHHHhhccccccccccccCCCCcEEEEeccchHHHHH--------HHHhccccCCceE--EEeCCC------CHHHHH
Confidence 8888762 456778888888887765 33333 2222 323333 899999
Q ss_pred HHhhhc--CCcEEEEc--CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccC---CC-CCCC-CCccEEEeCCCCc
Q 018401 186 KSATLF--RPKLIVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG---VI-PSPF-EYADVVTTTTHKS 256 (356)
Q Consensus 186 ~~i~~~--~~k~v~l~--~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~---~~-~~~l-~~~D~~~~s~~K~ 256 (356)
+++... +.++|++. .++.|.+.|+++|.++|++||+++|+|+||+.|.+... .. ..++ ..+|+++++..|.
T Consensus 241 ~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA 320 (476)
T PLN02955 241 SLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKA 320 (476)
T ss_pred HHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccc
Confidence 888642 23455554 66689999999999999999999999999998876431 11 1111 2478999999998
Q ss_pred CCCCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCc-HHHHHHHHHHHHHHhcccccchhhcccccchHH
Q 018401 257 LRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPH-NHTITGLAVALKQVCTLITFSHIHVFSLHVYPA 335 (356)
Q Consensus 257 l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~-~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~ 335 (356)
+ |-.||+++.++ ++.+.+.....+..++|.. .+..++..+|++.+..+. .+...|+...+
T Consensus 321 ~-G~~GGfi~gs~--------------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~----~~r~~L~~n~~ 381 (476)
T PLN02955 321 A-GCHGGFIACSK--------------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEK----WRRKAIWERVK 381 (476)
T ss_pred h-hccCceeecHH--------------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCH----HHHHHHHHHHH
Confidence 6 56689988887 5566665444455555544 445566668888876532 23345555555
Q ss_pred HHhh
Q 018401 336 FVSN 339 (356)
Q Consensus 336 ~~~~ 339 (356)
++..
T Consensus 382 ~fr~ 385 (476)
T PLN02955 382 EFKA 385 (476)
T ss_pred HHHH
Confidence 5443
No 144
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.77 E-value=2.9e-17 Score=158.12 Aligned_cols=224 Identities=19% Similarity=0.182 Sum_probs=145.5
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC--CCCee
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK--PHDRI 136 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~--~gd~V 136 (356)
+|+|++++.+.+.. +..+..+++...++ .....++++.+++++|.+. .+++++|++++..++..+.. +|+.|
T Consensus 61 ~p~v~~a~~~~~~~-~~~~~~~s~~~~g~---~~~~~~Le~~la~~~g~~~--~l~~~sG~~an~~ai~~l~~~~~~~~v 134 (402)
T TIGR01821 61 HPEVLQAMHETLDK-YGAGAGGTRNISGT---NIPHVELEAELADLHGKES--ALVFTSGYVANDATLATLAKIIPGCVI 134 (402)
T ss_pred CHHHHHHHHHHHHH-cCCCCcchhhhhCC---cHHHHHHHHHHHHHhCCCe--EEEECchHHHHHHHHHHhhCCCCCCEE
Confidence 79999999998876 43333333322221 2223455688999998643 35577889999988887754 78888
Q ss_pred eecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh---cCCcEEEEc-CCC-CCCcccHHH
Q 018401 137 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAG-ASA-YARLYDYER 211 (356)
Q Consensus 137 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~---~~~k~v~l~-~~n-~g~~~~l~~ 211 (356)
+.....|.+... ++...|..+..+ + ..|++++++.++. .++++|+++ +.| +|.+.|+++
T Consensus 135 ~~~~~~h~s~~~--------~~~~~g~~~~~~--~------~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~ 198 (402)
T TIGR01821 135 FSDELNHASMIE--------GIRHSGAEKFIF--R------HNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEE 198 (402)
T ss_pred EEcchHhHHHHH--------HHHHcCCeEEEE--C------CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHH
Confidence 777667765543 222344333222 2 2367777777752 257888887 555 899999999
Q ss_pred HHHHHHHcCCEEEEeccchhhhcc-c--CC-CCCCC-CCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHH
Q 018401 212 IRKVCNKQKAIMLADMAHISGLVA-A--GV-IPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYE 286 (356)
Q Consensus 212 I~~la~~~g~~vivD~a~~~g~~~-~--~~-~~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~ 286 (356)
|.++|++||+++|+|++|+.|... . +. ...++ ..+|+++.+++|++++ .||+++.++ ++.
T Consensus 199 i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~-~GG~i~~~~--------------~~~ 263 (402)
T TIGR01821 199 ICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGV-VGGYIAASR--------------KLI 263 (402)
T ss_pred HHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhcc-CCceeecCH--------------HHH
Confidence 999999999999999999977542 1 11 11111 1368998999998854 567777766 444
Q ss_pred HhhccccCCCCC-CCCcHHHHHHHHHHHHHHhcc
Q 018401 287 EKINQAVFPGLQ-GGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 287 ~~~~~~~~~~~~-gt~~~~~~~al~~Al~~~~~~ 319 (356)
+.+.....+..+ ++.+....++..++++.+.+.
T Consensus 264 ~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~ 297 (402)
T TIGR01821 264 DAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES 297 (402)
T ss_pred HHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC
Confidence 444322222222 345566677777889888654
No 145
>PRK09148 aminotransferase; Validated
Probab=99.76 E-value=8.5e-17 Score=154.97 Aligned_cols=226 Identities=14% Similarity=0.140 Sum_probs=146.1
Q ss_pred ccccChHHHHHHHHHHHH----HHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHH
Q 018401 27 LEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (356)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 100 (356)
+..+.++++..+.+.... .++.|+|..+++. +++.+++++.+.+......+| +...+..+++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y------~~~~G~~~lr~aia~~ 80 (405)
T PRK09148 7 IRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRY------SASKGIPGLRRAQAAY 80 (405)
T ss_pred hhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCC------CCCCCCHHHHHHHHHH
Confidence 344556666665544322 1356888877663 468888888776643211123 3334567888888888
Q ss_pred HHHHcCC--CCC-ccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC-C
Q 018401 101 ALEAFRL--DPE-KWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-T 176 (356)
Q Consensus 101 la~~~g~--~~~-~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~ 176 (356)
+.+.+|. +++ +|++|+|+++++..++.+++++||.|++++++|..+.. .....|+++..++ .+.+ .
T Consensus 81 ~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~~v~~v~--~~~~~~ 150 (405)
T PRK09148 81 YARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAF--------GFIMAGGVIRSVP--AEPDEE 150 (405)
T ss_pred HHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHhcCCEEEEEe--CCCCCC
Confidence 8877775 566 78789999999998999999999999999976655432 3334576665564 4322 2
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccH---HHHHHHHHHcCCEEEEeccchhhhccc----CCCCCC-CCCc
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDY---ERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSP-FEYA 246 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l---~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~~-l~~~ 246 (356)
+..+++++.+...+ ++++|+++ |+| ||.+.+. ++|.++|++||+++|+|+++..-.... .+...+ ....
T Consensus 151 ~~~~l~~~~~~~~~-~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~ 229 (405)
T PRK09148 151 FFPALERAVRHSIP-KPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDV 229 (405)
T ss_pred CccCHHHHHhhccc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCc
Confidence 33344444333333 78888888 788 8987775 578888999999999999975322111 111111 0123
Q ss_pred cEEEeCCCCcCCCC--CceEEEEec
Q 018401 247 DVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 247 D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
.+++.|++|.++.| +-|+++.++
T Consensus 230 ~i~~~SfSK~~~~pGlR~G~~v~~~ 254 (405)
T PRK09148 230 TVEFTSMSKTFSMAGWRMGFAVGNE 254 (405)
T ss_pred EEEEeccccccCCcchheeeeeCCH
Confidence 46789999977433 339998766
No 146
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=1.5e-17 Score=157.64 Aligned_cols=197 Identities=16% Similarity=0.121 Sum_probs=139.6
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.++|..++++ +++.+++++.+.+.. . ..++. .+..+ +++.++++++++++++++++|+++++..
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~-~~~p~-------~g~~~----lr~~ia~~~~~~~~~i~~t~G~~~~l~~ 96 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE-L-ALYPD-------GYAPE----LRTKVAKHLGVDEEQLLFGAGLDEVIQM 96 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH-h-hcCCC-------CcHHH----HHHHHHHHhCCCHHHEEECCCHHHHHHH
Confidence 56889888775 578899998887654 1 01221 22333 4588888889988888889999999988
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n- 202 (356)
++.+++++||.|++++++|+.+ ...+...|.++..++ .+ ++.+|++++++.+.+ ++++++++ |+|
T Consensus 97 ~~~~~~~~gd~v~~~~p~y~~~--------~~~~~~~g~~~~~~~--~~--~~~~d~~~l~~~~~~-~~~~v~i~~p~NP 163 (359)
T PRK03158 97 ISRALLNPGTNTVMAEPTFSQY--------RHNAIIEGAEVREVP--LK--DGGHDLEAMLKAIDE-QTKIVWICNPNNP 163 (359)
T ss_pred HHHHHhCCCCEEEEcCCCHHHH--------HHHHHHcCCeEEEEe--cC--CCCcCHHHHHHhcCC-CCCEEEEeCCCCC
Confidence 8888999999999999665443 223345576666664 43 357899999988876 88999887 888
Q ss_pred CCCcccHHHHHHHHHH--cCCEEEEeccchhhhcccCCCCC-C---CCCccEEEeCCCCcCC--CCCceEEEEec
Q 018401 203 YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPS-P---FEYADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~--~g~~vivD~a~~~g~~~~~~~~~-~---l~~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
||...+.++|.++++. +|+++|+|+++............ . .....+++.|++|.++ |.+-|+++.++
T Consensus 164 tG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 238 (359)
T PRK03158 164 TGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE 238 (359)
T ss_pred CCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH
Confidence 9999999999999887 59999999998543221110000 0 0024588899999774 33349988876
No 147
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.76 E-value=6.7e-18 Score=162.01 Aligned_cols=154 Identities=12% Similarity=0.128 Sum_probs=118.5
Q ss_pred HHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCC
Q 018401 97 CQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 176 (356)
Q Consensus 97 ~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 176 (356)
+++.+++++|.+. .++++||++++..++.++++|||+|+++.+.|++...... ..+...|++++.+ +.
T Consensus 69 Le~~iA~~~g~~~--~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G~~v~~v--d~---- 136 (400)
T PRK06234 69 VENKLALLEGGEA--AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLN----HGLTRYGVEVTFV--DT---- 136 (400)
T ss_pred HHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHH----HHHhhCCeEEEEE--CC----
Confidence 4488888998753 4568899999888888999999999999977765543211 1233456555444 32
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHc--CCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~--g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
.|++++++++++ ++++|+++ ++| +|.+.|+++|.++|+++ |+++++|++++.+.....+ .. ++|+++.|
T Consensus 137 --~d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l-~~---g~Divv~S 209 (400)
T PRK06234 137 --SNLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPL-QL---GADVVVHS 209 (400)
T ss_pred --CCHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCch-hh---CCcEEEee
Confidence 278999999987 89999998 888 89999999999999997 9999999999876543111 12 48999999
Q ss_pred CCCcCCCCC---ceEEEEec
Q 018401 253 THKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 253 ~~K~l~gp~---gG~l~~~~ 269 (356)
++|+++|+. ||+++.++
T Consensus 210 ~sK~l~g~g~~~gG~v~~~~ 229 (400)
T PRK06234 210 ATKYLNGHGDVIAGFVVGKE 229 (400)
T ss_pred ccccccCCCCceeEEEEecH
Confidence 999998765 48888876
No 148
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.76 E-value=2.8e-17 Score=156.72 Aligned_cols=185 Identities=14% Similarity=0.089 Sum_probs=132.5
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCCCee
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPHDRI 136 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~gd~V 136 (356)
..++-++++.+.+...+. ++. ..+.+++.+++++++|.+ ++++++||++++.+++.++ ++|||+|
T Consensus 9 ~~~~~~~~~~~~l~~~~~--------~g~----~~~~~~~e~~la~~~g~~--~~v~~~sgt~al~~~l~~~~~~~Gd~V 74 (375)
T PRK11706 9 VVGTELDYIQQAMSSGKL--------CGD----GGFTRRCQQWLEQRFGSA--KVLLTPSCTAALEMAALLLDIQPGDEV 74 (375)
T ss_pred CCHHHHHHHHHHHHcCCc--------cCC----CHHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHhCCCCCCEE
Confidence 455667778777765321 111 134455668889898885 4566889998887666666 7999999
Q ss_pred eecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHH
Q 018401 137 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVC 216 (356)
Q Consensus 137 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la 216 (356)
+++.++|.++.. .+...|++++.+ +++++++.+|++++++++++ ++++|+++ +.+|...++++|.++|
T Consensus 75 iv~~~t~~~~~~--------~~~~~G~~~v~~--d~d~~~~~~d~~~le~~i~~-~tk~i~~~-~~~G~~~~~~~i~~la 142 (375)
T PRK11706 75 IMPSYTFVSTAN--------AFVLRGAKIVFV--DIRPDTMNIDETLIEAAITP-KTRAIVPV-HYAGVACEMDTIMALA 142 (375)
T ss_pred EECCCCcHHHHH--------HHHHcCCEEEEE--ecCCCcCCcCHHHHHHhcCC-CCeEEEEe-CCCCCccCHHHHHHHH
Confidence 999988876644 344567666544 66645567999999999987 89998876 2378889999999999
Q ss_pred HHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCC--CcCCCCCceEEEEecC
Q 018401 217 NKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFRKG 270 (356)
Q Consensus 217 ~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~--K~l~gp~gG~l~~~~~ 270 (356)
+++|+++|+|++|+.|....+. ..+ ...|+.++|+| |.+..+.||+++++++
T Consensus 143 ~~~~i~vIeD~a~a~g~~~~~~-~~g-~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~ 196 (375)
T PRK11706 143 KKHNLFVVEDAAQGVMSTYKGR-ALG-TIGHIGCFSFHETKNYTAGEGGALLINDP 196 (375)
T ss_pred HHcCCEEEEECccccccccCCe-eee-cCcCEEEEeCCCCccccccCCeEEEECCH
Confidence 9999999999999988642211 111 12477777777 9886655677777653
No 149
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=7.2e-18 Score=161.12 Aligned_cols=156 Identities=18% Similarity=0.183 Sum_probs=118.3
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++++.+++++|.+.. ++++||++++.+++.+++++||+|+++++.|++........ ....|+.+..+ +
T Consensus 65 ~Le~~lA~~~g~~~~--i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~----~~~~gi~~~~~--d---- 132 (388)
T PRK07811 65 ALEEQLAALEGGAYG--RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKV----FTRWGVEYTPV--D---- 132 (388)
T ss_pred HHHHHHHHHhCCCce--EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHh----CcCCCeEEEEe--C----
Confidence 445889999999775 34667889999899999999999999998887654322111 11124333322 2
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
..|++++++++++ ++|+|+++ ++| +|.+.|+++|+++|+++|+++|+|++++.+.....+ .. ++|++++|+
T Consensus 133 --~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~-~~---gaDivv~S~ 205 (388)
T PRK07811 133 --LSDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPL-AL---GADVVVHST 205 (388)
T ss_pred --CCCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCch-hh---CCcEEEecC
Confidence 2489999999987 89999997 887 899999999999999999999999998876543211 12 489999999
Q ss_pred CCcCCCCC---ceEEEEecC
Q 018401 254 HKSLRGPR---GAMIFFRKG 270 (356)
Q Consensus 254 ~K~l~gp~---gG~l~~~~~ 270 (356)
+|+++||. ||+++++++
T Consensus 206 sK~l~g~~~~~gG~vv~~~~ 225 (388)
T PRK07811 206 TKYIGGHSDVVGGALVTNDE 225 (388)
T ss_pred ceeecCCCCcEEEEEEECCH
Confidence 99998875 577877653
No 150
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.76 E-value=2.1e-17 Score=162.35 Aligned_cols=214 Identities=11% Similarity=0.058 Sum_probs=143.7
Q ss_pred cCCeeecCCCCCc-HHHHHHHHhhhhc----c-CCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC----CCCCccccCC
Q 018401 47 KGLELIPSENFTS-VSVMQAVGSVMTN----K-YSEGYPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGGSL 116 (356)
Q Consensus 47 ~~i~L~~~~~~~~-~~V~~a~~~~l~~----~-~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g----~~~~~v~v~~ 116 (356)
..|+|...||++. +.+.+.+.+.... . ....++....|+...+..++++++++++.+.+| +++++|++++
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~ 126 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSG 126 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEcc
Confidence 4689999999863 3335555443221 0 111244444566667788899999999998877 6888888899
Q ss_pred CchHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccccc-ccceeeEEEecccCCCCCCCCHHHHHHHhhh-----
Q 018401 117 SGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLNESTGYIDYDQLEKSATL----- 190 (356)
Q Consensus 117 sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~----- 190 (356)
|+++++..++.++++|||.|++++|.|+++.. .+. ..|++++.+++..+ +++.+|++.+++++..
T Consensus 127 Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~--------~~~~~~G~~vv~v~~~~~-~~~~~~~~~le~a~~~a~~~~ 197 (496)
T PLN02376 127 GATGANETIMFCLADPGDVFLIPSPYYAAFDR--------DLRWRTGVEIIPVPCSSS-DNFKLTVDAADWAYKKAQESN 197 (496)
T ss_pred chHHHHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhhCCCEEEEEeCCCC-ccCcCCHHHHHHHHHHHHhcC
Confidence 99999998999999999999999966654432 233 25666655543322 3468899999866421
Q ss_pred cCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc-CCCC---C----CCCC--cc--EEEeCC
Q 018401 191 FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA-GVIP---S----PFEY--AD--VVTTTT 253 (356)
Q Consensus 191 ~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~-~~~~---~----~l~~--~D--~~~~s~ 253 (356)
.++|+|+++ |+| ||.+.+ +++|.++|+++++++|+|++++.-.... .... . ...+ .+ +++.|+
T Consensus 198 ~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~ 277 (496)
T PLN02376 198 KKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSL 277 (496)
T ss_pred CCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEec
Confidence 268888887 888 997777 5567788999999999999986422111 0000 0 0000 12 457899
Q ss_pred CCcCC--CCCceEEEEec
Q 018401 254 HKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 254 ~K~l~--gp~gG~l~~~~ 269 (356)
+|.|+ |.+-|+++..+
T Consensus 278 SK~~glpGlRvG~li~~~ 295 (496)
T PLN02376 278 SKDMGLPGFRVGIVYSFN 295 (496)
T ss_pred cccCCCCcceEEEEEECC
Confidence 99874 33449999854
No 151
>PRK09265 aminotransferase AlaT; Validated
Probab=99.76 E-value=4e-17 Score=157.26 Aligned_cols=203 Identities=18% Similarity=0.101 Sum_probs=136.0
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHc--CCCCCccccCCCch
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF--RLDPEKWGGSLSGS 119 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~--g~~~~~v~v~~sgs 119 (356)
+.++|..+.. ++++.+.+++.+.+... ..|+. ..+..++++++.+++.+.. +++++++++++|++
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~--~~Y~~------~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~ 105 (404)
T PRK09265 34 KILKLNIGNPAPFGFEAPDEILRDVIRNLPTA--QGYSD------SKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVS 105 (404)
T ss_pred CeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC--CCCCC------CCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChH
Confidence 5688876433 26788988888765431 13333 2445567765555554332 57888888888888
Q ss_pred HHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEE
Q 018401 120 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA 198 (356)
Q Consensus 120 ~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~l 198 (356)
+++..++.+++++||+|++++++|..+.. .+...|.....+ +.+. +++.+|++++++++.+ ++++|++
T Consensus 106 ~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~v~~--~~~~~~~~~~d~~~l~~~~~~-~~~~v~l 174 (404)
T PRK09265 106 ELIVMAMQALLNNGDEVLVPAPDYPLWTA--------AVSLSGGKPVHY--LCDEEAGWFPDLDDIRSKITP-RTKAIVI 174 (404)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCcChHH--------HHHHcCCEEEEE--ecccccCCCCCHHHHHHhccc-cceEEEE
Confidence 98888889999999999999977764432 233445555444 3332 3457899999998876 7998888
Q ss_pred c-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCC-CC-CCCC-Cc-cEEEeCCCCcCC--CCCceEEEE
Q 018401 199 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV-IP-SPFE-YA-DVVTTTTHKSLR--GPRGAMIFF 267 (356)
Q Consensus 199 ~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~-~~-~~l~-~~-D~~~~s~~K~l~--gp~gG~l~~ 267 (356)
+ |+| ||.+.+ +++|.++|+++|+++|+|+++.--...... .. ..+. .. -+++.|.+|.++ |.+-|+++.
T Consensus 175 ~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~ 254 (404)
T PRK09265 175 INPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVL 254 (404)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEE
Confidence 7 888 898888 888899999999999999997521111000 00 0011 11 256688899874 334498886
Q ss_pred e
Q 018401 268 R 268 (356)
Q Consensus 268 ~ 268 (356)
.
T Consensus 255 ~ 255 (404)
T PRK09265 255 S 255 (404)
T ss_pred e
Confidence 4
No 152
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=8.2e-18 Score=162.32 Aligned_cols=149 Identities=14% Similarity=0.102 Sum_probs=116.8
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
+++++.++++.|+++. ++++||++|+.+++.+++++||+|+++..+|++....... .+...|++++.+ +.+
T Consensus 67 ~~le~~lA~l~g~~~a--v~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~----~l~~~Gi~v~~v--d~~- 137 (433)
T PRK08134 67 AVLEERVAALEGGVGA--IATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHY----TLRRFGIETTFV--KPG- 137 (433)
T ss_pred HHHHHHHHHHhCCCcE--EEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHH----HHhhCCeEEEEE--CCC-
Confidence 3455889999998764 5699999999988888899999999999888765432211 111245555444 332
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
|++++++++++ +||+|++. ++| +|.+.|+++|+++|+++|+++|+|++|+.+.....+ .. ++|++++|
T Consensus 138 -----d~~~l~~~i~~-~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl-~~---GaD~vv~S 207 (433)
T PRK08134 138 -----DIDGWRAAIRP-NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPF-EH---GADLVYHS 207 (433)
T ss_pred -----CHHHHHHhcCC-CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch-hc---CCCEEEec
Confidence 79999999987 89999887 777 789999999999999999999999999888764332 33 49999999
Q ss_pred CCCcCCCCCc
Q 018401 253 THKSLRGPRG 262 (356)
Q Consensus 253 ~~K~l~gp~g 262 (356)
+|||++|+..
T Consensus 208 ~tK~l~g~g~ 217 (433)
T PRK08134 208 ATKFLGGHGT 217 (433)
T ss_pred cccccCCCCC
Confidence 9999877653
No 153
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.76 E-value=2.8e-17 Score=158.46 Aligned_cols=205 Identities=12% Similarity=0.007 Sum_probs=143.5
Q ss_pred HcCCeeecCCC------CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCC
Q 018401 46 WKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLS 117 (356)
Q Consensus 46 ~~~i~L~~~~~------~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~s 117 (356)
++.|+|..++. ++|+.+++++.+.+......+ |+...+..++++++.+++.+.+|. ++++|++|+|
T Consensus 32 ~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~------Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G 105 (409)
T PLN00143 32 RLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNS------YAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLG 105 (409)
T ss_pred CceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCC------CCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecC
Confidence 35788876655 568889999988876521112 333345677888888888877654 7788888989
Q ss_pred chHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEE
Q 018401 118 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLI 196 (356)
Q Consensus 118 gs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~k~v 196 (356)
+++++..++.++++|||.|+++.|+|..+. ..+...|.++..++ .+. +++.+|+++|++++.+ +++++
T Consensus 106 ~~~al~~~~~~l~~~gd~v~v~~P~y~~~~--------~~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~~~~-~~~~~ 174 (409)
T PLN00143 106 CKHAAEIIIKVLARPEANILLPRPGFPDVE--------TYAIFHHLEIRHFD--LLPEKGWEVDLDAVEAIADE-NTIAM 174 (409)
T ss_pred hHHHHHHHHHHHcCCCCEEEEcCCCCcCHH--------HHHHHcCCEEEEEe--ccCCCCCcCCHHHHHHhccc-CCEEE
Confidence 999999899999999999999996654432 23445666665554 432 3467899999998876 78877
Q ss_pred EEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCC---CCC--ccEEEeCCCCcCCC--CCceE
Q 018401 197 VAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FEY--ADVVTTTTHKSLRG--PRGAM 264 (356)
Q Consensus 197 ~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~---l~~--~D~~~~s~~K~l~g--p~gG~ 264 (356)
+++ |+| ||.+.+ +++|.++|++|++++|+|+++.--... +....+ +.. --+++.|++|.++. .+-|+
T Consensus 175 ~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~-~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~ 253 (409)
T PLN00143 175 VIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFG-SKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGW 253 (409)
T ss_pred EEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccC-CCCCcchhhhcccCcEEEEccchhhcCCCccceEE
Confidence 776 888 997776 667788899999999999997521111 100011 111 23788999997543 33399
Q ss_pred EEEe
Q 018401 265 IFFR 268 (356)
Q Consensus 265 l~~~ 268 (356)
++..
T Consensus 254 ~v~~ 257 (409)
T PLN00143 254 LVTC 257 (409)
T ss_pred EEee
Confidence 9884
No 154
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.76 E-value=1.2e-17 Score=158.69 Aligned_cols=222 Identities=15% Similarity=0.111 Sum_probs=150.4
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.|+|..++|+ +|+.+++++.+.+.... .||. .+..+ +|+.+++++|+++++|++++|+++++..
T Consensus 30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~~~--~Yp~-------~g~~~----Lr~aia~~~~~~~~~I~vt~Gs~e~i~~ 96 (366)
T PRK01533 30 SFVKLASNENPFGCSPRVLDELQKSWLDHA--LYPD-------GGATT----LRQTIANKLHVKMEQVLCGSGLDEVIQI 96 (366)
T ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHHHhcC--cCCC-------CCHHH----HHHHHHHHhCCCcceEEECCCHHHHHHH
Confidence 56899999986 58889999988765421 2332 22333 4577888889999998889999999998
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n- 202 (356)
+++++++|||.|++++|+| ..+...+...|.+++.++ .+ ++.+|++++++++++ ++++++++ |+|
T Consensus 97 ~~~~l~~~gd~vlv~~P~y--------~~~~~~~~~~g~~v~~v~--~~--~~~~d~~~l~~~~~~-~~~~v~i~~P~NP 163 (366)
T PRK01533 97 ISRAVLKAGDNIVTAGATF--------PQYRHHAIIEGCEVKEVA--LN--NGVYDLDEISSVVDN-DTKIVWICNPNNP 163 (366)
T ss_pred HHHHhcCCCCEEEEcCCcH--------HHHHHHHHHcCCEEEEee--cC--CCCcCHHHHHHHhCc-CCcEEEEeCCCCC
Confidence 9999999999999999554 333334556777776664 43 346899999998876 88999888 888
Q ss_pred CCCcccHHHHHHHHH---HcCCEEEEeccchhhhcccC-C-CCCC-CC--CccEEEeCCCCcCC--CCCceEEEEecCcc
Q 018401 203 YARLYDYERIRKVCN---KQKAIMLADMAHISGLVAAG-V-IPSP-FE--YADVVTTTTHKSLR--GPRGAMIFFRKGVK 272 (356)
Q Consensus 203 ~g~~~~l~~I~~la~---~~g~~vivD~a~~~g~~~~~-~-~~~~-l~--~~D~~~~s~~K~l~--gp~gG~l~~~~~~~ 272 (356)
||.+.+.+++.++++ +++ ++|+|+++. .....+ . ...+ +. .--+++.|++|.++ |.+-|+++.++
T Consensus 164 TG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~--- 238 (366)
T PRK01533 164 TGTYVNDRKLTQFIEGISENT-LIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE--- 238 (366)
T ss_pred CCCCcCHHHHHHHHHhCCCCC-EEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH---
Confidence 998888776666654 444 678899975 222111 0 0000 01 13488999999764 33339888765
Q ss_pred hhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHH
Q 018401 273 EINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVAL 313 (356)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al 313 (356)
++.+.+..... ....+.+...++.++|
T Consensus 239 -----------~~~~~l~~~~~---~~~~~~~~q~aa~~~l 265 (366)
T PRK01533 239 -----------ELIEKLNVVRL---PFNVSSLAQKAATIAF 265 (366)
T ss_pred -----------HHHHHHHHhcC---CCCcCHHHHHHHHHHh
Confidence 45555543321 1345556666666666
No 155
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.76 E-value=7.2e-18 Score=160.60 Aligned_cols=156 Identities=19% Similarity=0.189 Sum_probs=116.8
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
+++++.+++++|++. .+++++|+.++.+++. ++++||+|+++++.|+++...+.. .+...|++++.+ +.
T Consensus 50 ~~le~~la~l~g~~~--~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~----~~~~~G~~v~~v--d~-- 118 (378)
T TIGR01329 50 TALESLLAKLDKADR--AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQ----VVPRSGVVVVHV--DT-- 118 (378)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHH----HHHHcCcEEEEe--CC--
Confidence 455689999999843 3557777877775554 789999999999888765432221 122345555444 32
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
.|++++++++++ ++|+|+++ ++| +|.+.|+++|+++|+++|+++|+|++|+.+.....+ .. ++|++++|
T Consensus 119 ----~d~~~le~~i~~-~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l-~~---g~Di~v~S 189 (378)
T TIGR01329 119 ----TDLDKVKAALGP-KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPL-EL---GADIVYHS 189 (378)
T ss_pred ----CCHHHHHHhcCc-CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh-hc---CCcEEEEe
Confidence 278999999986 89999998 888 899999999999999999999999999766543222 22 48999999
Q ss_pred CCCcCCCCC---ceEEEEecC
Q 018401 253 THKSLRGPR---GAMIFFRKG 270 (356)
Q Consensus 253 ~~K~l~gp~---gG~l~~~~~ 270 (356)
+||+++||. +|+++++++
T Consensus 190 ~tK~l~G~~~~~~G~v~~~~~ 210 (378)
T TIGR01329 190 ATKFLAGHSDVMAGVLAVKGE 210 (378)
T ss_pred cceeccCCccceeEEEEeCcH
Confidence 999999875 477877664
No 156
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=3.1e-17 Score=156.64 Aligned_cols=195 Identities=15% Similarity=0.109 Sum_probs=136.9
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.|+|..++|+ +||.+++++... .. ...|+.. ... .+|+.+++++|+++++|++++|+++++..
T Consensus 53 ~~i~l~~n~~p~~~~~~v~~a~~~~-~~--~~~Yp~~-------~~~----~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~ 118 (380)
T PLN03026 53 DIVKLDANENPYGPPPEVLEALGNM-KF--PYVYPDP-------ESR----RLRAALAEDSGLESENILVGCGADELIDL 118 (380)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHhh-Hh--hccCCCC-------CHH----HHHHHHHHHhCcChhhEEEcCCHHHHHHH
Confidence 57899998875 578888887542 11 1122221 122 45688899999999888889899999988
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n- 202 (356)
++.+++++||+|++++++|+ .+...+...|+++..+ +.+ +++.+|++++++++...++++|+++ |+|
T Consensus 119 ~~~~~~~~gd~Vlv~~P~y~--------~y~~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~~~~~~~~~v~l~~P~NP 187 (380)
T PLN03026 119 LMRCVLDPGDKIIDCPPTFG--------MYVFDAAVNGAEVIKV--PRT-PDFSLDVPRIVEAVETHKPKLLFLTSPNNP 187 (380)
T ss_pred HHHHhcCCCCEEEEcCCChH--------HHHHHHHHcCCEEEEe--ecC-CCCCcCHHHHHHHHhccCCcEEEEeCCCCC
Confidence 88888999999999995553 2332344567666555 444 4578899999998833389999988 878
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccC-CCC-CCCCCccEEEeCCCCcCCCCCc---eEEEEec
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-VIP-SPFEYADVVTTTTHKSLRGPRG---AMIFFRK 269 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~-~~~-~~l~~~D~~~~s~~K~l~gp~g---G~l~~~~ 269 (356)
||...+.+++.++++.. +++|+|+++.- ..... ... .......+++.|++|.+ |..| |+++.++
T Consensus 188 TG~~~~~~~l~~l~~~~-~~vi~DeaY~~-~~~~~~~~~~~~~~~~viv~~SfSK~~-glaGlRiGy~~~~~ 256 (380)
T PLN03026 188 DGSIISDDDLLKILELP-ILVVLDEAYIE-FSTQESRMKWVKKYDNLIVLRTFSKRA-GLAGLRVGYGAFPL 256 (380)
T ss_pred CCCCCCHHHHHHHHhcC-CEEEEECcchh-hcCCcchHHHHHhCCCEEEEecchHhh-cCccccceeeecCH
Confidence 99999999999999865 89999999742 11100 000 00001458899999976 3334 9988766
No 157
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.76 E-value=4.5e-17 Score=158.94 Aligned_cols=165 Identities=15% Similarity=0.100 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecc
Q 018401 93 AESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 171 (356)
Q Consensus 93 l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 171 (356)
...+.++++++++|++++++++++|+++++.+++.++ ..+||+|++++++|+++...+.. -....|.+++.+ +
T Consensus 113 ~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~----~~~~~G~~~~~v--~ 186 (447)
T PRK00451 113 AIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKT----YLKGQGIEVVEV--P 186 (447)
T ss_pred HHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHH----HHHhCCcEEEEe--c
Confidence 3334557889999998888777999998888788887 58999999999888776543321 111246666555 5
Q ss_pred cCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCCcccHHHHHHHHHHcCCEEEE--eccchhhhcccCCCCCCCCCccE
Q 018401 172 LNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYARLYDYERIRKVCNKQKAIMLA--DMAHISGLVAAGVIPSPFEYADV 248 (356)
Q Consensus 172 ~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n~g~~~~l~~I~~la~~~g~~viv--D~a~~~g~~~~~~~~~~l~~~D~ 248 (356)
.+ ++ .+|++++++++++ ++++|+++ ++.+|.+.|+++|+++|+++|+++++ |.. +.|.+.. ...+ ++|+
T Consensus 187 ~~-~~-~~d~~~l~~~i~~-~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~-~~~~---~~D~ 258 (447)
T PRK00451 187 YE-DG-VTDLEALEAAVDD-DTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKP-PGEY---GADI 258 (447)
T ss_pred CC-CC-CCCHHHHHHhcCC-CeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCC-cccC---CCCE
Confidence 55 34 8899999999987 89999998 64499999999999999999999998 644 3443321 1223 4999
Q ss_pred EEeCCCCc-----CCCCCceEEEEecCc
Q 018401 249 VTTTTHKS-----LRGPRGAMIFFRKGV 271 (356)
Q Consensus 249 ~~~s~~K~-----l~gp~gG~l~~~~~~ 271 (356)
+++++||| ++||+.|++++++++
T Consensus 259 ~~~s~~k~~~~~~~~Gpg~G~l~~~~~~ 286 (447)
T PRK00451 259 VVGEGQPLGIPLSFGGPYLGFFATRKKL 286 (447)
T ss_pred EEECCCcCCCCCCCCCCCchHHHhhHHH
Confidence 99999996 567755999988754
No 158
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.76 E-value=5.4e-17 Score=152.55 Aligned_cols=236 Identities=15% Similarity=0.112 Sum_probs=150.3
Q ss_pred eeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHHHHHH
Q 018401 50 ELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 50 ~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a~~~~ 125 (356)
+|..+.++ .++.+++++.+.-.. .....|....+..++++.+++++...++. .++++++++|+++++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~ 75 (350)
T cd00609 2 DLSIGEPDFPPPPEVLEALAAAALR------AGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLL 75 (350)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHhhc------cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHH
Confidence 45444443 456666666541111 11112233345677877777777776653 355677799999999989
Q ss_pred HHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCH--HHHHHHhhhcCCcEEEEc-CCC
Q 018401 126 YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY--DQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 126 l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~--~~l~~~i~~~~~k~v~l~-~~n 202 (356)
+.++.++||+|+++++.|.++.. .++..|..++.+ +.+ +++..+. +.++....+ ++++|+++ ++|
T Consensus 76 ~~~~~~~g~~vl~~~~~~~~~~~--------~~~~~~~~~~~i--~~~-~~~~~~~~~~~~~~~~~~-~~~~v~i~~~~~ 143 (350)
T cd00609 76 LRALLNPGDEVLVPDPTYPGYEA--------AARLAGAEVVPV--PLD-EEGGFLLDLELLEAAKTP-KTKLLYLNNPNN 143 (350)
T ss_pred HHHhCCCCCEEEEcCCCchhHHH--------HHHHCCCEEEEE--ecc-cccCCccCHHHHHhhcCc-cceEEEEECCCC
Confidence 99999999999999988776643 333455556555 444 2333333 566665555 88999887 555
Q ss_pred -CCCcccHHHH---HHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCCcCC-CC-CceEEEEecCcc
Q 018401 203 -YARLYDYERI---RKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLR-GP-RGAMIFFRKGVK 272 (356)
Q Consensus 203 -~g~~~~l~~I---~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K~l~-gp-~gG~l~~~~~~~ 272 (356)
+|...|++++ .++|+++|+++|+|++|+.+...... ......+.|+++.|+||+++ ++ +.|+++++++
T Consensus 144 ~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-- 221 (350)
T cd00609 144 PTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-- 221 (350)
T ss_pred CCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH--
Confidence 7888876655 48999999999999999765432211 11111247999999999986 33 3388888773
Q ss_pred hhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHh
Q 018401 273 EINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 317 (356)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~ 317 (356)
++.+.+.... ....++++.....++..+++...
T Consensus 222 -----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~ 254 (350)
T cd00609 222 -----------ELLERLKKLL-PYTTSGPSTLSQAAAAAALDDGE 254 (350)
T ss_pred -----------HHHHHHHHHH-HhcccCCChHHHHHHHHHHhCcH
Confidence 2444443321 12235777778887777777653
No 159
>PRK09105 putative aminotransferase; Provisional
Probab=99.75 E-value=3.9e-17 Score=155.40 Aligned_cols=196 Identities=14% Similarity=0.019 Sum_probs=137.0
Q ss_pred HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHH
Q 018401 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 46 ~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~ 123 (356)
++.++|+.++++ +|+.+++++.+.+... ..|+.. ... ++|+.+++++|+++++|++++|+++++.
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~Y~~~-------~~~----~Lr~aia~~~~v~~e~I~it~Gs~~ai~ 109 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAALS--GRYDLE-------LED----DLRTLFAAQEGLPADHVMAYAGSSEPLN 109 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHHh--cCCCCc-------hHH----HHHHHHHHHhCcChhhEEEcCChHHHHH
Confidence 356888888874 5889999998876431 122211 123 4557788899999999888999999999
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
.++.+++++||+|++++++|..+. ..+...|.+++.+ +.+ +++.+|++++++. .+ ++++++++ |+|
T Consensus 110 ~~~~~l~~~gd~Vli~~P~y~~~~--------~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~-~~-~~~~v~l~nP~N 176 (370)
T PRK09105 110 YAVLAFTSPTAGLVTADPTYEAGW--------RAADAQGAPVAKV--PLR-ADGAHDVKAMLAA-DP-NAGLIYICNPNN 176 (370)
T ss_pred HHHHHHcCCCCEEEEeCCChHHHH--------HHHHHcCCeEEEe--cCC-CCCCCCHHHHHhc-CC-CCCEEEEeCCCC
Confidence 899999999999999996665442 2445567666555 444 3467899999876 34 78998887 888
Q ss_pred -CCCcccHHHHHHHHHH--cCCEEEEeccchhhhcccCCCCCCC--CCcc-EEEeCCCCcCCCCC--ceEEEEec
Q 018401 203 -YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF--EYAD-VVTTTTHKSLRGPR--GAMIFFRK 269 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~--~g~~vivD~a~~~g~~~~~~~~~~l--~~~D-~~~~s~~K~l~gp~--gG~l~~~~ 269 (356)
||.+.+.++|.++++. +++++|+|+++.. ... ......+ ...+ +++.|.+|+++.|. -|+++.++
T Consensus 177 PTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~-f~~-~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~ 249 (370)
T PRK09105 177 PTGTVTPRADIEWLLANKPAGSVLLVDEAYIH-FSD-APSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP 249 (370)
T ss_pred CCCcCcCHHHHHHHHHhCCCCcEEEEECchHH-hcc-CcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCH
Confidence 9999998888888754 4899999999831 111 1000000 0123 66778999764332 39999876
No 160
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.75 E-value=2e-17 Score=157.39 Aligned_cols=197 Identities=17% Similarity=0.074 Sum_probs=138.8
Q ss_pred HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHH
Q 018401 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 46 ~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~ 123 (356)
.+.++|..++++ +++.+++++.+.+.. + ..|+.. . . ..+++.+++++|++++++++++|+++++.
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~------~-~----~~lr~~ia~~~~~~~~~i~~t~G~~~~l~ 98 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADE-L-HRYPDG------S-G----FELKAALAEKFGVDPERIILGNGSDEILE 98 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC------c-H----HHHHHHHHHHhCcCHHHEEEcCCHHHHHH
Confidence 356888888765 578899999887654 2 133322 1 1 24558888889998888888888888887
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
.++.+++++||.|++++++|..+. ......|.+++.+ +. +++.+|++++++++++ ++++|+++ ++|
T Consensus 99 ~~~~~l~~~gd~vl~~~p~y~~~~--------~~~~~~g~~~~~~--~~--~~~~~~~~~l~~~~~~-~~~~v~l~~p~n 165 (367)
T PRK02731 99 LLARAYLGPGDEVIYSEHGFAVYP--------IAAQAVGAKPVEV--PA--KDYGHDLDAMLAAVTP-RTRLVFIANPNN 165 (367)
T ss_pred HHHHHhcCCCCEEEEecCCHHHHH--------HHHHHcCCeEEEe--cc--cCCCCCHHHHHHHhCC-CCcEEEEeCCCC
Confidence 788888999999999986664321 1233456666555 44 3467899999999976 89999887 777
Q ss_pred -CCCcccHHHHHHHHHHc--CCEEEEeccchhhhcccCCCCCCC-----CCccEEEeCCCCcCC--CCCceEEEEec
Q 018401 203 -YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPF-----EYADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~~--g~~vivD~a~~~g~~~~~~~~~~l-----~~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
+|.+.+.++|.++++.+ |+++|+|+++...... +....++ ..-.+++.|.+|.++ |.+-|+++.++
T Consensus 166 ptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~ 241 (367)
T PRK02731 166 PTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRR-KDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP 241 (367)
T ss_pred CCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccC-cCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH
Confidence 99999999999998875 8999999997543221 1100010 113477889999763 33339998876
No 161
>PLN02263 serine decarboxylase
Probab=99.75 E-value=1.8e-16 Score=151.99 Aligned_cols=171 Identities=12% Similarity=0.060 Sum_probs=128.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCc-c-ccCCCchHHHHHHHHhhc--CCCCeeeecCCCCCcccCccccccccccccccee
Q 018401 89 YIDMAESLCQKRALEAFRLDPEK-W-GGSLSGSPSNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 164 (356)
Q Consensus 89 ~~~~l~~~~~~~la~~~g~~~~~-v-~v~~sgs~a~~~~l~al~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 164 (356)
...++|.++.+|+++++|.++++ + .+|+|||++|..++.+.- .+...|++++..|.++.. .+.+.|.+
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~K--------Aa~llgi~ 201 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK--------AARMYRME 201 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHH--------HHHhcCCc
Confidence 36789999999999999996532 2 459999999998776652 244467777877776643 55667777
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcC--CcEEEEc--CCCCCCcccHHHHHHHHHHcCC-----EEEEeccchhhhcc
Q 018401 165 FETMPYRLNESTGYIDYDQLEKSATLFR--PKLIVAG--ASAYARLYDYERIRKVCNKQKA-----IMLADMAHISGLVA 235 (356)
Q Consensus 165 ~~~v~~~~~~~~~~~d~~~l~~~i~~~~--~k~v~l~--~~n~g~~~~l~~I~~la~~~g~-----~vivD~a~~~g~~~ 235 (356)
++.| +.+ +++.+|+++|++++.+.. +-+|+.+ .+++|.+.|+++|.++|+++|+ |++||+|.+...+|
T Consensus 202 ~~~V--p~d-~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lP 278 (470)
T PLN02263 202 CVKV--DTL-VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMP 278 (470)
T ss_pred ceEe--ccC-CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhh
Confidence 7667 455 568999999999997632 3344455 3448999999999999999997 99999997655554
Q ss_pred cCCCCCCCC---CccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 236 AGVIPSPFE---YADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 236 ~~~~~~~l~---~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
.--...++. .+|.++.++|||++.|.+ |+++++++
T Consensus 279 f~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~ 317 (470)
T PLN02263 279 FVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRME 317 (470)
T ss_pred hcccccccCCCcCccEEEECCccccCCCcCEEEEEEehh
Confidence 321111122 499999999999999999 99999874
No 162
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.75 E-value=7.4e-17 Score=155.59 Aligned_cols=225 Identities=17% Similarity=0.158 Sum_probs=143.0
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC--CCCe
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK--PHDR 135 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~--~gd~ 135 (356)
.+|.|++++.+.+.. +..+..+++.+.+. .+...++++.+++++|.+ + .++.++|++++..++..+.. +++.
T Consensus 61 ~~p~v~~a~~~~~~~-~~~~~~~s~~~~g~---~~~~~~l~~~la~~~g~~-~-~~~~~sG~~an~~ai~~l~~~~~~~~ 134 (407)
T PRK09064 61 QHPKVIEAMIEALDR-CGAGAGGTRNISGT---NHYHVELERELADLHGKE-A-ALVFTSGYVSNDATLSTLAKLIPDCV 134 (407)
T ss_pred CCHHHHHHHHHHHHH-cCCCCCCcCcCccC---HHHHHHHHHHHHHHhCCC-c-EEEECcHHHHHHHHHHHHhCCCCCCE
Confidence 489999999988865 32233233322211 233345568889999853 3 34567788888877777654 7777
Q ss_pred eeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh---cCCcEEEEc-CCC-CCCcccHH
Q 018401 136 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAG-ASA-YARLYDYE 210 (356)
Q Consensus 136 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~---~~~k~v~l~-~~n-~g~~~~l~ 210 (356)
|+.....|.+... ++...+.....+ +. .|++++++.+.. .++++|+++ +.| +|.+.|++
T Consensus 135 i~~~~~~h~s~~~--------~~~~~~~~~~~~--~~------~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~ 198 (407)
T PRK09064 135 IFSDELNHASMIE--------GIRRSRCEKHIF--RH------NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIA 198 (407)
T ss_pred EEEeCcchHHHHH--------HHHHcCCcEEEE--CC------CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHH
Confidence 7777666665543 222334333222 22 377888877752 267888887 444 79999999
Q ss_pred HHHHHHHHcCCEEEEeccchhhhcc-cC--C-CCCCC-CCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhH
Q 018401 211 RIRKVCNKQKAIMLADMAHISGLVA-AG--V-IPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDY 285 (356)
Q Consensus 211 ~I~~la~~~g~~vivD~a~~~g~~~-~~--~-~~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~ 285 (356)
+|.++|+++|+++|+|++|+.|... .+ . ...++ ...|+++.+++|++ |+.||+++.++ ++
T Consensus 199 ~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~~~~~~--------------~~ 263 (407)
T PRK09064 199 EICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMGGYIAGSA--------------AL 263 (407)
T ss_pred HHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhh-hccCceEecCH--------------HH
Confidence 9999999999999999999877532 11 1 01111 23689999999987 45578887766 44
Q ss_pred HHhhccccCCCCC-CCCcHHHHHHHHHHHHHHhcc
Q 018401 286 EEKINQAVFPGLQ-GGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 286 ~~~~~~~~~~~~~-gt~~~~~~~al~~Al~~~~~~ 319 (356)
.+.+.....+..+ ++.+....+++.++++++.+.
T Consensus 264 ~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~ 298 (407)
T PRK09064 264 VDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKES 298 (407)
T ss_pred HHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcC
Confidence 4444322222222 234445566677889888764
No 163
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=2.5e-17 Score=155.78 Aligned_cols=225 Identities=17% Similarity=0.138 Sum_probs=149.8
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.|+|..++++ +++.+++++.+.+.... ..|+.. +.. .+|+.+++++++++++|++|+|+++++..
T Consensus 25 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~~-------~~~----~lr~aia~~~~~~~~~I~it~G~~~al~~ 92 (353)
T PRK05387 25 KLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPDP-------NAD----ALRQAIAAYYGLDPEQVFVGNGSDEVLAH 92 (353)
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCCC-------cHH----HHHHHHHHHhCCCHHHEEEcCCHHHHHHH
Confidence 56899988875 46889999987765421 123322 123 45688888899999888889999999998
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n- 202 (356)
+++++++|||+|++++++|..+ ...+...|+++..+ +.+ +++.+|++++++ .+++++++ |+|
T Consensus 93 ~~~~l~~~gd~vlv~~P~y~~~--------~~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~-----~~~~v~~~~P~NP 156 (353)
T PRK05387 93 AFLAFFNHDRPLLFPDITYSFY--------PVYAGLYGIPYEEI--PLD-DDFSIDVEDYLR-----PNGGIIFPNPNAP 156 (353)
T ss_pred HHHHhcCCCCEEEEeCCCHHHH--------HHHHHHcCCEEEEe--ecC-CCCCCCHHHHHh-----cCCEEEEeCCCCC
Confidence 9999999999999999655332 22344567666555 454 457889998863 35677776 888
Q ss_pred CCCcccHHHHHHHHHHc-CCEEEEeccchhhhcccCCCC-CCCCCccEEEeCCCCcCC--CCCceEEEEecCcchhccCC
Q 018401 203 YARLYDYERIRKVCNKQ-KAIMLADMAHISGLVAAGVIP-SPFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQG 278 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~-g~~vivD~a~~~g~~~~~~~~-~~l~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g 278 (356)
||.+.+.+++.++++.+ ++++|+|+++.. ........ .......+++.|++|.++ |.+-|+++.++
T Consensus 157 tG~~~~~~~~~~l~~~~~~~~livDe~y~~-~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------- 226 (353)
T PRK05387 157 TGIALPLAEIERILAANPDSVVVIDEAYVD-FGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP--------- 226 (353)
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCcccc-cCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCH---------
Confidence 99999999999999876 999999999741 11000000 000124689999999764 44449998766
Q ss_pred cchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018401 279 KEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 314 (356)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~ 314 (356)
++.+.+..........+.+.+...++..+++
T Consensus 227 -----~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~ 257 (353)
T PRK05387 227 -----ELIEALNRVKNSFNSYPLDRLAQAGAIAAIE 257 (353)
T ss_pred -----HHHHHHHHhhccCCCCCcCHHHHHHHHHHhc
Confidence 4444443321111123455556555555553
No 164
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.75 E-value=9e-18 Score=160.51 Aligned_cols=156 Identities=15% Similarity=0.099 Sum_probs=115.5
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++++.+++++|.+.. ++++||++++..++.+++++||+|+++.+.|++....... .....|..+..+
T Consensus 65 ~Le~~lA~l~G~~~a--l~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~----~~~~~gi~~~~~------- 131 (386)
T PRK06767 65 LFEERMAVLEGGEEA--LAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEV----LEEKFMITHSFC------- 131 (386)
T ss_pred HHHHHHHHHhCCCcE--EEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHH----HHhhcCeEEEEe-------
Confidence 344889999997643 5577888888888888999999999999877655432111 011123222212
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
...|++++++++.+ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+.....+ .. ++|+++.|+
T Consensus 132 -~~~d~~~l~~~i~~-~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl-~~---g~Div~~S~ 205 (386)
T PRK06767 132 -DMETEADIENKIRP-NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPL-EL---GCDAVVHSA 205 (386)
T ss_pred -CCCCHHHHHHhhCc-CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCch-hc---CCcEEEecC
Confidence 12478999999886 89999997 777 899999999999999999999999999765443222 12 489999999
Q ss_pred CCcCCCCC---ceEEEEecC
Q 018401 254 HKSLRGPR---GAMIFFRKG 270 (356)
Q Consensus 254 ~K~l~gp~---gG~l~~~~~ 270 (356)
+|+++|+. ||+++.+++
T Consensus 206 sK~l~g~g~~~gG~v~~~~~ 225 (386)
T PRK06767 206 TKYIGGHGDVVAGVTICKTR 225 (386)
T ss_pred cceecCCCCceeEEEEeChH
Confidence 99998875 588888773
No 165
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.75 E-value=1.7e-17 Score=158.68 Aligned_cols=156 Identities=21% Similarity=0.212 Sum_probs=118.3
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
+++++.+++++|.+. +++++||++++..++.+++++||+|+++++.|++....+. ..+...|++++.+ +.+
T Consensus 64 ~~le~~la~l~g~~~--~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~----~~~~~~G~~v~~v--d~~- 134 (390)
T PRK08133 64 TMFQERLAALEGAEA--CVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFE----KIFARFGIETTFV--DLT- 134 (390)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHH----HHHHHcCcEEEEE--CCC-
Confidence 345688999999864 4568899999998899999999999999988876543221 1122345555444 332
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
|.+++++++++ +||+|+++ ++| +|.+.|+++|.++|+++|+++|+|++++.+.....+ .. ++|++++|
T Consensus 135 -----d~~~l~~~i~~-~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~pl-~~---g~Divv~S 204 (390)
T PRK08133 135 -----DLDAWRAAVRP-NTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQPL-KL---GADVVIHS 204 (390)
T ss_pred -----CHHHHHHhcCc-CCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCCch-hh---CCcEEEee
Confidence 78999999987 89999997 878 899999999999999999999999998765432211 12 48999999
Q ss_pred CCCcCCCCC---ceEEEEec
Q 018401 253 THKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 253 ~~K~l~gp~---gG~l~~~~ 269 (356)
+||+++|+. ||+++.++
T Consensus 205 ~sK~~~g~g~~~GG~vv~~~ 224 (390)
T PRK08133 205 ATKYLDGQGRVLGGAVVGSK 224 (390)
T ss_pred cceeecCCcceEeEEEEcCH
Confidence 999987653 36776665
No 166
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.75 E-value=1.5e-16 Score=153.18 Aligned_cols=208 Identities=14% Similarity=0.019 Sum_probs=138.6
Q ss_pred HcCCeeecCCC------CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCC
Q 018401 46 WKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLS 117 (356)
Q Consensus 46 ~~~i~L~~~~~------~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~s 117 (356)
.+.++|..+++ ++++.+++++.+.+......+| +...+...+++++++++....+. +++++++++|
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y------~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G 104 (403)
T TIGR01265 31 KPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGY------APSVGALAAREAVAEYLSSDLPGKLTADDVVLTSG 104 (403)
T ss_pred CCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCC------CCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecC
Confidence 35788886654 4678999999887765321122 22344556665555555544343 5677878999
Q ss_pred chHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 018401 118 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 197 (356)
Q Consensus 118 gs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~ 197 (356)
+++++..++.+++++||+|++++++|..+. ..+...|.+++.+++..+ +++.+|++++++++.+ ++++++
T Consensus 105 ~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~-~~~~v~ 174 (403)
T TIGR01265 105 CSQAIEICIEALANPGANILVPRPGFPLYD--------TRAAFSGLEVRLYDLLPE-KDWEIDLDGLEALADE-KTVAIV 174 (403)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCchhHH--------HHHHHcCCEEEEecCCcc-cCCccCHHHHHHHhCc-CccEEE
Confidence 999999899999999999999997664332 123345655655543222 3467999999998876 788888
Q ss_pred Ec-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCC--CCCCCC-C-ccEEEeCCCCcCCCCC--ceEEE
Q 018401 198 AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV--IPSPFE-Y-ADVVTTTTHKSLRGPR--GAMIF 266 (356)
Q Consensus 198 l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~--~~~~l~-~-~D~~~~s~~K~l~gp~--gG~l~ 266 (356)
++ ++| +|.+.+ +++|.++|+++|+++|+|+++.--...... ....+. . --+++.|.+|.++.|. -|+++
T Consensus 175 i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v 254 (403)
T TIGR01265 175 VINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWII 254 (403)
T ss_pred EecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEE
Confidence 87 777 897765 788999999999999999997521111100 000111 1 1277889999765443 39988
Q ss_pred Eec
Q 018401 267 FRK 269 (356)
Q Consensus 267 ~~~ 269 (356)
..+
T Consensus 255 ~~~ 257 (403)
T TIGR01265 255 IHD 257 (403)
T ss_pred EeC
Confidence 753
No 167
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.75 E-value=3.9e-17 Score=157.62 Aligned_cols=224 Identities=20% Similarity=0.193 Sum_probs=142.8
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc--CCCCe
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL--KPHDR 135 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~--~~gd~ 135 (356)
.+|.|++++.+.+.. +..+..+++.+.+.. ....++++.+++++|.+ + .+++++|++++..++..+. .+||.
T Consensus 61 ~~p~v~~a~~~~~~~-~~~~~~~s~~~~~~~---~~~~~Le~~la~~~g~~-~-~i~~~sG~~a~~~~i~~l~~~~~g~~ 134 (410)
T PRK13392 61 QHPDVIGAMVDALDR-YGAGAGGTRNISGTS---HPHVLLERELADLHGKE-S-ALLFTSGYVSNDAALSTLGKLLPGCV 134 (410)
T ss_pred CCHHHHHHHHHHHHH-cCCCCchhhhcccCh---HHHHHHHHHHHHHhCCC-C-EEEECcHHHHHHHHHHHHhcCCCCCE
Confidence 479999999998865 432332333222221 12234558899999964 3 3456677888887887664 48998
Q ss_pred eeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhh---hcCCcEEEEc-CCC-CCCcccHH
Q 018401 136 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT---LFRPKLIVAG-ASA-YARLYDYE 210 (356)
Q Consensus 136 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~---~~~~k~v~l~-~~n-~g~~~~l~ 210 (356)
|++....|.+... .+...|.++..+ +.+ |.+++++.+. ..++++|+++ ++| +|.+.|++
T Consensus 135 vi~~~~~h~s~~~--------~~~~~g~~~~~~--~~~------d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~ 198 (410)
T PRK13392 135 ILSDALNHASMIE--------GIRRSGAEKQVF--RHN------DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIE 198 (410)
T ss_pred EEEehhhhHHHHH--------HHHHcCCeEEEE--eCC------CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHH
Confidence 8887777766543 233445544333 221 4555555553 2368898887 666 89999999
Q ss_pred HHHHHHHHcCCEEEEeccchhhhcccC---CC-CCC-CCCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhH
Q 018401 211 RIRKVCNKQKAIMLADMAHISGLVAAG---VI-PSP-FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDY 285 (356)
Q Consensus 211 ~I~~la~~~g~~vivD~a~~~g~~~~~---~~-~~~-l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~ 285 (356)
+|.++|+++|+++|+|++|+.|..... +. ..+ ...+|+++.+++|+++++ ||+++.++ ++
T Consensus 199 ~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~-GG~~~~~~--------------~~ 263 (410)
T PRK13392 199 AICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL-GGYIAASA--------------DL 263 (410)
T ss_pred HHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc-cchhhcCH--------------HH
Confidence 999999999999999999997764211 10 011 124789999999988654 57777665 44
Q ss_pred HHhhccccCCCCC-CCCcHHHHHHHHHHHHHHhc
Q 018401 286 EEKINQAVFPGLQ-GGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 286 ~~~~~~~~~~~~~-gt~~~~~~~al~~Al~~~~~ 318 (356)
.+.+.....+..+ ++.+.+..+++.+||+.+..
T Consensus 264 ~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~ 297 (410)
T PRK13392 264 IDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKT 297 (410)
T ss_pred HHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhc
Confidence 4443332222222 33444567778888987754
No 168
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=1.3e-17 Score=158.59 Aligned_cols=154 Identities=11% Similarity=0.041 Sum_probs=113.1
Q ss_pred HHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCC
Q 018401 97 CQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 176 (356)
Q Consensus 97 ~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 176 (356)
+++.++++.+.. ++++++||++++..++.++++|||+|+++++.|++...... ......|+.+..+ +.+
T Consensus 66 Le~~iA~le~~~--~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~----~~l~~~Gi~v~~v--~~~--- 134 (394)
T PRK09028 66 FQAAIVELEGGA--GTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCD----KILKGFGIETTYY--DPM--- 134 (394)
T ss_pred HHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHH----HhhhhcceEEEEE--CCC---
Confidence 447788877764 34668899999998999999999999999977755432111 1112234444333 221
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCC
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 254 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~ 254 (356)
+.+.+++++.+ +||+|+++ ++| +|.+.|+++|+++|+++|+++++|++|+.+.. ...... |+|+++.|+|
T Consensus 135 ---~~e~l~~~l~~-~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~-~~Pl~~---GaDivv~S~t 206 (394)
T PRK09028 135 ---IGEGIRELIRP-NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-SRPFEM---GVDISIQAAT 206 (394)
T ss_pred ---CHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-CCcccc---CceEEEEeCC
Confidence 46788888876 89999998 888 88999999999999999999999999987642 222233 4999999999
Q ss_pred CcCCCCCc---eEEEEec
Q 018401 255 KSLRGPRG---AMIFFRK 269 (356)
Q Consensus 255 K~l~gp~g---G~l~~~~ 269 (356)
||++|+.. |+++.++
T Consensus 207 K~l~Gh~d~~~G~~~~~~ 224 (394)
T PRK09028 207 KYIVGHSDVMLGTATANE 224 (394)
T ss_pred eEecCCCCEEEEEEECCH
Confidence 99999864 6554443
No 169
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.75 E-value=1.4e-17 Score=159.40 Aligned_cols=156 Identities=17% Similarity=0.173 Sum_probs=116.1
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
+++++.++++.|.+.. ++++||++++..++.+++++||+|+++.+.|++....+.. .+...|+++..+ +
T Consensus 67 ~~le~~lA~l~g~~~~--i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~----~~~~~Gi~v~~v--d--- 135 (398)
T PRK08249 67 QAFEEKVRILEGAEAA--TAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTE----FLPRMGVDVTLC--E--- 135 (398)
T ss_pred HHHHHHHHHHhCCCeE--EEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHH----HHhhCCeEEEEc--C---
Confidence 3455889999997643 5578888899888889999999999999888765332211 122235444322 2
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
..|++++++++++ +|++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+.....+ .. ++|+++.|
T Consensus 136 ---~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l-~~---~~Divv~S 207 (398)
T PRK08249 136 ---TGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNPL-AL---GADLVIHS 207 (398)
T ss_pred ---CCCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCch-hh---CCCEEecc
Confidence 2589999999987 89999997 778 899999999999999999999999998755432111 12 48999999
Q ss_pred CCCcCCCCC---ceEEEEec
Q 018401 253 THKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 253 ~~K~l~gp~---gG~l~~~~ 269 (356)
++|+++|+. ||+++.++
T Consensus 208 ~sK~l~g~~~~~gG~vv~~~ 227 (398)
T PRK08249 208 ATKFLSGHADALGGVVCGSK 227 (398)
T ss_pred CceecCCCCCceEEEEECCH
Confidence 999998764 36666544
No 170
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.75 E-value=1.8e-17 Score=157.89 Aligned_cols=156 Identities=21% Similarity=0.161 Sum_probs=116.4
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++++.++++.|. +++++++||++++..++.+++++||+|+++.+.|++.+..+... ....+..+..+ +
T Consensus 55 ~le~~lA~l~g~--~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~----~~~~~~~v~~~----d-- 122 (382)
T TIGR02080 55 LLQQALAELEGG--AGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNAL----AKKGCFRVLFV----D-- 122 (382)
T ss_pred HHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHH----HhhcCeEEEEE----C--
Confidence 455888998885 35666999999999899999999999999998887654322211 11112223222 1
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
..|++++++++++ ++|+|+++ ++| +|.+.|+++|.++|+++|+++++|++++.+.....+ .. ++|+++.|+
T Consensus 123 --~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl-~~---gaDivv~S~ 195 (382)
T TIGR02080 123 --QGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPL-AL---GADLVLHSC 195 (382)
T ss_pred --CCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCch-hh---CCCEEEeec
Confidence 2378999999987 89999997 887 899999999999999999999999999766432211 12 489999999
Q ss_pred CCcCCCCCc---eEEEEecC
Q 018401 254 HKSLRGPRG---AMIFFRKG 270 (356)
Q Consensus 254 ~K~l~gp~g---G~l~~~~~ 270 (356)
+|+++|+.+ |++++++.
T Consensus 196 sK~l~G~~~~~~G~i~~~~~ 215 (382)
T TIGR02080 196 TKYLNGHSDVIAGAVIAKDP 215 (382)
T ss_pred ceeccCCCCceeEEEEeCCH
Confidence 999988764 77666553
No 171
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.74 E-value=8e-17 Score=154.50 Aligned_cols=173 Identities=17% Similarity=0.105 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCc-cccCCCch-HHHHHHHHhhc--C-CCCeeeecCCCCCcccCccccccccccccccee
Q 018401 90 IDMAESLCQKRALEAFRLDPEK-WGGSLSGS-PSNFQVYTALL--K-PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 164 (356)
Q Consensus 90 ~~~l~~~~~~~la~~~g~~~~~-v~v~~sgs-~a~~~~l~al~--~-~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 164 (356)
...+.+++.+++++++|++..+ .++++++| .++.+++.++- . +||.|+++..+|.+... .+.+.|++
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~k--------Ai~~~G~~ 174 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIK--------AISTAGFE 174 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHH--------HHHHcCCe
Confidence 5567777889999999997332 34477787 56665666552 2 68999999988877654 56678877
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCCC--CCcccHHHHHHHHHHcCCEEEEeccchhhhcccC-C
Q 018401 165 FETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-V 238 (356)
Q Consensus 165 ~~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k~v~l~-~~n~--g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~-~ 238 (356)
++.++...+++++.+|+++|++++++. ++.+++++ ++.+ +...|+++|.++|++||+++|+|+||+.+..... +
T Consensus 175 pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~ 254 (444)
T TIGR03531 175 PRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMEL 254 (444)
T ss_pred EEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhh
Confidence 776753244466789999999999852 34455555 4433 3788999999999999999999999986543211 1
Q ss_pred CCCC--CCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 239 IPSP--FEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 239 ~~~~--l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
...+ .+.+|++++|+||++..|.+ |+++++++
T Consensus 255 ~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~ 289 (444)
T TIGR03531 255 INKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDE 289 (444)
T ss_pred hhccccccCCCeEEEeCccCCCCCCCEEEEEECCH
Confidence 1111 12379999999999988766 66667664
No 172
>PRK05968 hypothetical protein; Provisional
Probab=99.74 E-value=1.3e-17 Score=159.32 Aligned_cols=154 Identities=14% Similarity=0.130 Sum_probs=115.3
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++++.+++++|.+.. ++++||+.++..++.++++|||+|+++.+.|++.+..+. ..+...|+.++.+ +.
T Consensus 67 ~le~~lA~l~g~~~a--v~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~G~~v~~v--d~--- 135 (389)
T PRK05968 67 AFEEMLAKLEGAEDA--RGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFE----TILKRMGVEVDYV--DG--- 135 (389)
T ss_pred HHHHHHHHHhCCCcE--EEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH----HHHHHcCceEEEe--CC---
Confidence 445889999999754 446788888888888899999999999988876543221 1223345555443 22
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
.|++++++++ + ++|+|+++ ++| ++...|+++|+++|+++|+++|+|++|+.+.....+ .. ++|++++|+
T Consensus 136 ---~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~-~~---g~Divv~S~ 206 (389)
T PRK05968 136 ---RDEEAVAKAL-P-GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRPI-TL---GVDLVIHSA 206 (389)
T ss_pred ---CCHHHHHHhc-c-cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCch-hc---CCcEEEeec
Confidence 2789999888 4 78999987 777 678899999999999999999999999776532211 22 489999999
Q ss_pred CCcCCCCC---ceEEEEec
Q 018401 254 HKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp~---gG~l~~~~ 269 (356)
+|+++||. ||+++.++
T Consensus 207 tK~l~g~~~~~gG~i~~~~ 225 (389)
T PRK05968 207 SKYLGGHSDTVAGVVAGSK 225 (389)
T ss_pred cccccCCCCeEEEEEEECH
Confidence 99998864 47777665
No 173
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=4.6e-17 Score=154.21 Aligned_cols=198 Identities=14% Similarity=0.107 Sum_probs=139.2
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC-ccccCCCchHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE-KWGGSLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~-~v~v~~sgs~a~~ 123 (356)
+.++|..++|+ +|+.+++++.+.+......+|+.. +.. ++|+.+++++|++++ ++++++|+++++.
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-------~~~----~lr~~ia~~~~~~~~~~I~~t~G~~~~i~ 95 (356)
T PRK04870 27 GMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDP-------RAA----ALKAALRAAMGVPAGADVLLGNGSDELIQ 95 (356)
T ss_pred CceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCC-------CHH----HHHHHHHHHhCcCCCCcEEEcCCHHHHHH
Confidence 57889888885 689999999987754211233321 223 455888888898653 6766888888888
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
.++.+++++||+|+++++.|.. +...+...|++++.+ +.+ +++.+|++++++++.+.++++|+++ ++|
T Consensus 96 ~~~~~~~~~gd~vlv~~P~y~~--------~~~~~~~~g~~~~~i--~~~-~~~~~d~~~l~~~~~~~~~~~v~l~~p~N 164 (356)
T PRK04870 96 LLALACAKPGATVLAPEPGFVM--------YRMSAKLAGLEFVGV--PLT-ADFTLDLPAMLAAIAEHRPALVFLAYPNN 164 (356)
T ss_pred HHHHHhcCCCCEEEECCCCHHH--------HHHHHHHcCCEEEEe--cCC-CCCCCCHHHHHHHhhcCCCCEEEEcCCCC
Confidence 8888889999999999855433 333455667666555 555 4578999999999875579999998 888
Q ss_pred -CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC--CccEEEeCCCCcCC--CCCceEEEEec
Q 018401 203 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~--~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
||.+.+.+++.++++..++++|+|+++.. ........ .+. .-.+++.|.+| ++ |.+-|+++.++
T Consensus 165 PtG~~~~~~~~~~i~~~~~~~ii~De~y~~-~~~~~~~~-~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~ 233 (356)
T PRK04870 165 PTGNLFDDADVERIIEAAPGLVVVDEAYQP-FAGDSWLP-RLARFPNLLVMRTVSK-LGLAGLRLGYLAGHP 233 (356)
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCchh-hcCcchHH-HHhhCCCEEEEecchh-hhhHHHhhhhhhCCH
Confidence 99999999888888777899999999742 11101000 001 13488999999 52 33349888776
No 174
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.74 E-value=6.3e-17 Score=153.32 Aligned_cols=192 Identities=16% Similarity=0.161 Sum_probs=130.0
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.++|..++++ +|+.+++++.+.+.. . ..|+.. .. ..+|+.++++++++++++++++|+++++..
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~-~~y~~~-------~~----~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~ 87 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDC-A-ERYPDV-------EY----RHLHQALARHHQVPASWILAGNGETESIFA 87 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHh-c-ccCcCc-------cH----HHHHHHHHHHhCcChhhEEECCCHHHHHHH
Confidence 46889888886 688999999877654 1 123221 12 346688888899999888888888888887
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
++.++ .+|+ +++.++ .|..+...+...|.++..++ .+. +++.+| +++++.+.+ ++|+|+++ |+|
T Consensus 88 ~~~~l-~~g~-viv~~P--------~y~~~~~~~~~~g~~~~~v~--~~~~~~~~~~-~~~~~~~~~-~~k~v~l~~p~N 153 (356)
T PRK08056 88 VVSGL-KPRR-AMIVTP--------GFAEYRRALQQVGCEIRRYS--LREADGWQLT-DAILEALTP-DLDCLFLCTPNN 153 (356)
T ss_pred HHHHh-CCCC-EEEeCC--------CcHHHHHHHHHcCCeEEEEe--cccccCCCcc-HHHHHhccC-CCCEEEEeCCcC
Confidence 77765 7786 555553 33333334556677676664 432 234556 455566664 89999987 888
Q ss_pred -CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC------CCCCCCCCccEEEeCCCCcCCCCC--ceEEEEec
Q 018401 203 -YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG------VIPSPFEYADVVTTTTHKSLRGPR--GAMIFFRK 269 (356)
Q Consensus 203 -~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~------~~~~~l~~~D~~~~s~~K~l~gp~--gG~l~~~~ 269 (356)
||...+ +++|+++|+++++++|+|+++. +....+ +...+ .++++.|++|+++.|. -|+++..+
T Consensus 154 PTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~---~~i~~~S~SK~~~~~G~RiG~~v~~~ 228 (356)
T PRK08056 154 PTGLLPERQLLQAIAERCKSLNIALILDEAFI-DFIPDETGFIPQLADNP---HLWVLRSLTKFYAIPGLRLGYLVNSD 228 (356)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCEEEEecchh-ccCCcchHHHHHhccCC---CEEEEEechhhccCcchhheeeecCC
Confidence 998887 7788999999999999999953 111100 11122 5689999999874332 29988754
No 175
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=1.6e-17 Score=158.88 Aligned_cols=155 Identities=15% Similarity=0.151 Sum_probs=118.1
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
+.+++.+++++|++.. +++++|+.++.+++. ++++||+|++++++|++.+..+.. .+...|+.++.+ +.
T Consensus 57 ~~le~~lA~l~g~~~~--v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~----~~~~~G~~v~~v--~~-- 125 (390)
T PRK08064 57 EALEDIIAELEGGTKG--FAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITE----VLSRFGIEHTFV--DM-- 125 (390)
T ss_pred HHHHHHHHHHhCCCCe--EEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHH----HHHHcCCEEEEE--CC--
Confidence 3556899999998753 446788888876665 789999999999888766543321 122346555555 32
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
.|++++++++++ ++++|+++ ++| +|.+.|+++|.++|+++|+++++|++++.+.....+ .. ++|+++.|
T Consensus 126 ----~d~~~l~~~l~~-~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~-~~---g~Divv~S 196 (390)
T PRK08064 126 ----TNLEEVAQNIKP-NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPL-DL---GADVVLHS 196 (390)
T ss_pred ----CCHHHHHHhcCC-CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCch-hh---CCcEEEee
Confidence 278999999987 89999998 888 899999999999999999999999998765432221 23 48999999
Q ss_pred CCCcCCCCCc---eEEEEec
Q 018401 253 THKSLRGPRG---AMIFFRK 269 (356)
Q Consensus 253 ~~K~l~gp~g---G~l~~~~ 269 (356)
+||+++|+.| |++++++
T Consensus 197 ~tK~~~G~~~~laG~~v~~~ 216 (390)
T PRK08064 197 ATKFLAGHSDVLAGLAVVKD 216 (390)
T ss_pred cceeccCCccceeEEEEeCC
Confidence 9999998875 7777765
No 176
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.74 E-value=2.3e-17 Score=157.27 Aligned_cols=155 Identities=19% Similarity=0.155 Sum_probs=116.3
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.++++++++.|.+ .+++++||++++..++.++++|||+|+++++.|++.+..+... ....+..+..+ +
T Consensus 56 ~L~~~lA~l~g~~--~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~----~~~~gi~v~~v----d-- 123 (386)
T PRK08045 56 VVQRALAELEGGA--GAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSL----AKRGCYRVLFV----D-- 123 (386)
T ss_pred HHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHH----HhhCCeEEEEe----C--
Confidence 4558899999854 4566999999999889999999999999998887544322111 11112223222 2
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
..|++++++++++ ++++|+++ ++| +|.+.|+++|.++|+++|+++++|+++..+.....+ .. ++|+++.|+
T Consensus 124 --~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl-~~---gaDivv~S~ 196 (386)
T PRK08045 124 --QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPL-AL---GADLVLHSC 196 (386)
T ss_pred --CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCch-hh---CCCEEEeec
Confidence 2588999999987 89999998 887 899999999999999999999999998766432211 22 489999999
Q ss_pred CCcCCCCCc---eEEEEec
Q 018401 254 HKSLRGPRG---AMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp~g---G~l~~~~ 269 (356)
|||++|+.+ |++++++
T Consensus 197 tK~l~G~~d~~~G~vi~~~ 215 (386)
T PRK08045 197 TKYLNGHSDVVAGVVIAKD 215 (386)
T ss_pred ceeccCCCCceeEEEEeCc
Confidence 999998874 7666654
No 177
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.74 E-value=3.3e-16 Score=150.52 Aligned_cols=204 Identities=13% Similarity=0.092 Sum_probs=134.0
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHH-cCCCCCccccCCCchHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA-FRLDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~-~g~~~~~v~v~~sgs~a~~ 123 (356)
+.++|..+.++ +++.+.+++.+..... .+| +...+..++++++++++.+. .+++++++++++|+++++.
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~Y------~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~ 102 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEEV--LAY------SHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAIL 102 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcCC--cCc------CCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHH
Confidence 45778777663 5788888887654321 123 22344567776666665521 1357788888999999998
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC-CCC-CCHHHHHHHhhhcCCcEEEEc-C
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TGY-IDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~-~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
.++.+++++||+|+++++.|..+.. .....|..+..+ +.+.+ ++. .+++++++++++ ++++|+++ |
T Consensus 103 ~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~v--~~~~~~g~~~~~~~~l~~~~~~-~~~~v~i~~p 171 (397)
T PRK07568 103 FAMMAICDPGDEILVPEPFYANYNG--------FATSAGVKIVPV--TTKIEEGFHLPSKEEIEKLITP-KTKAILISNP 171 (397)
T ss_pred HHHHHhcCCCCEEEEecCCCccHHH--------HHHHcCCEEEEe--ecCcccCCCCCCHHHHHHhcCc-cceEEEEECC
Confidence 8888889999999999866543321 233456666555 44322 233 368999998876 88998887 7
Q ss_pred CC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC-C-CCCCCC---CccEEEeCCCCcCC--CCCceEEEEec
Q 018401 201 SA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-V-IPSPFE---YADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 201 ~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~-~-~~~~l~---~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
+| +|.+.+ +++|+++|+++|+++|+|+++..-..... . ....+. .--+++.|.+|.++ |.+.|++++.+
T Consensus 172 ~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~ 251 (397)
T PRK07568 172 GNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKN 251 (397)
T ss_pred CCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCC
Confidence 77 897664 78899999999999999999742111100 0 000111 12378889999875 33348888754
No 178
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.74 E-value=1e-16 Score=150.52 Aligned_cols=207 Identities=16% Similarity=0.157 Sum_probs=151.4
Q ss_pred cCCeeecCCCCC--cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC-CCCCccccCCCchHHHH
Q 018401 47 KGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~~~~~--~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g-~~~~~v~v~~sgs~a~~ 123 (356)
+.++|++++||. |+.+++++.+.+... +.||.. .. .++++.+++++| .++++|++.+|+++++.
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~~--~rYPd~-------~~----~~l~~a~a~~~~~~~~~~V~~gnGsde~i~ 89 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDKL--NRYPDP-------DY----RELRAALAEYYGVVDPENVLVGNGSDELIE 89 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHhh--ccCCCC-------cH----HHHHHHHHHHhCCCCcceEEEcCChHHHHH
Confidence 468999999985 588899888877631 244443 11 345688999999 67787777888889999
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
.++++++.|||.|+++. |.|.+|...+...|++++.+ +.+ + +..|++.+.+.+.+ ++++|++| |+|
T Consensus 90 ~l~~~~~~~gd~vl~~~--------Ptf~~Y~~~a~~~g~~~~~v--~~~-~-~~~d~~~~~~~~~~-~~~lv~i~nPNN 156 (356)
T COG0079 90 LLVRAFVEPGDTVLIPE--------PTFSMYEIAAQLAGAEVVKV--PLK-E-FRLDLDAILAAIRD-KTKLVFLCNPNN 156 (356)
T ss_pred HHHHHhhcCCCEEEEcC--------CChHHHHHHHHhcCCeEEEe--ccc-c-cccCHHHHHHhhhc-CCCEEEEeCCCC
Confidence 99999999999999999 55555555667788888766 455 3 78999999999987 89999998 888
Q ss_pred -CCCcccHHHHHHHHHHc--CCEEEEeccchhhhcccCC---CCCCCCCccEEEeCCCCcC--CCCCceEEEEecCcchh
Q 018401 203 -YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGV---IPSPFEYADVVTTTTHKSL--RGPRGAMIFFRKGVKEI 274 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~~--g~~vivD~a~~~g~~~~~~---~~~~l~~~D~~~~s~~K~l--~gp~gG~l~~~~~~~~~ 274 (356)
||...+.++|.+++... +.+||+|+|.. ...+... ...+ .-=+++-|++|.+ .|.+-|+++.++
T Consensus 157 PTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~-eF~~~~~~~l~~~~--~nlivlRTfSKa~gLAGlRlGy~ia~~----- 228 (356)
T COG0079 157 PTGTLLPREELRALLEALPEGGLVVIDEAYI-EFSPESSLELLKYP--PNLIVLRTFSKAFGLAGLRVGYAIANP----- 228 (356)
T ss_pred CCCCCCCHHHHHHHHHhCCCCcEEEEeCchh-hcCCchhhhhccCC--CCEEEEEecHHhhhcchhceeeccCCH-----
Confidence 99999988888888754 78999999952 2222111 0011 0138899999965 344449988777
Q ss_pred ccCCcchhhhHHHhhccccCCC
Q 018401 275 NKQGKEVFYDYEEKINQAVFPG 296 (356)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~ 296 (356)
++.+.++....|+
T Consensus 229 ---------~~i~~l~~vr~p~ 241 (356)
T COG0079 229 ---------ELIAALNKVRPPF 241 (356)
T ss_pred ---------HHHHHHHHhcCCC
Confidence 5666666554444
No 179
>PLN02509 cystathionine beta-lyase
Probab=99.74 E-value=3.2e-17 Score=158.70 Aligned_cols=158 Identities=16% Similarity=0.168 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEeccc
Q 018401 93 AESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 172 (356)
Q Consensus 93 l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 172 (356)
..+++.++++++.|.+.. ++++||++++. ++..++++||+|+++++.|+++...+. ..+...|+.++.+ +
T Consensus 134 t~~aLE~~lA~leg~e~a--i~~~SG~aAi~-~il~ll~~GD~VI~~~~~y~~t~~ll~----~~l~~~G~~v~~v--d- 203 (464)
T PLN02509 134 TRDALESLLAKLDKADRA--FCFTSGMAALS-AVTHLIKNGEEIVAGDDVYGGSDRLLS----QVVPRSGVVVKRV--N- 203 (464)
T ss_pred HHHHHHHHHHHHhCCCEE--EEeCcHHHHHH-HHHHHhCCCCEEEEcCCchhhHHHHHH----HHHHHCCeEEEEe--C-
Confidence 345666889999886543 44677887776 444678999999999987766532211 1122345444333 2
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEE
Q 018401 173 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 250 (356)
Q Consensus 173 ~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~ 250 (356)
..|++++++++.+ ++|+|+++ ++| +|.+.|+++|+++|+++|+++|+|++|+.+.....+ .. ++|+++
T Consensus 204 -----~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl-~~---gaDivv 273 (464)
T PLN02509 204 -----TTNLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPL-EL---GADIVM 273 (464)
T ss_pred -----CCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCChh-hc---CCcEEE
Confidence 2378999999987 89999998 877 899999999999999999999999999877643211 12 489999
Q ss_pred eCCCCcCCCCC---ceEEEEecC
Q 018401 251 TTTHKSLRGPR---GAMIFFRKG 270 (356)
Q Consensus 251 ~s~~K~l~gp~---gG~l~~~~~ 270 (356)
+|++||++|+. ||+++++++
T Consensus 274 ~S~tK~l~G~gdv~gG~v~~~~~ 296 (464)
T PLN02509 274 HSATKFIAGHSDVMAGVLAVKGE 296 (464)
T ss_pred ecCcccccCCCccceeEEEeccH
Confidence 99999998865 477777663
No 180
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.74 E-value=2.5e-17 Score=156.64 Aligned_cols=155 Identities=19% Similarity=0.173 Sum_probs=117.5
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++++.+++++|.+. .++++||++++..++.+++++||+|+++.+.|++....... .....|..+..+ +.+
T Consensus 44 ~le~~la~l~g~~~--a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~----~~~~~g~~~~~v--~~~-- 113 (369)
T cd00614 44 ALEKKLAALEGGEA--ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFER----LLPKLGIEVTFV--DPD-- 113 (369)
T ss_pred HHHHHHHHHHCCCC--EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHH----HHhhcCeEEEEe--CCC--
Confidence 34488888998754 35588899999999999999999999999887765432111 122345444433 332
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
|++++++++++ ++++|++. ++| +|.+.|+++|+++|+++|+++|+|++|+.+... ..... ++|+++.|+
T Consensus 114 ----d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-~~~~~---g~Divv~S~ 184 (369)
T cd00614 114 ----DPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-RPLEL---GADIVVHSA 184 (369)
T ss_pred ----CHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-Chhhh---CCcEEEecc
Confidence 68999999976 89999987 777 889999999999999999999999999877542 11122 489999999
Q ss_pred CCcCCCCC---ceEEEEec
Q 018401 254 HKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp~---gG~l~~~~ 269 (356)
+|+++|+. ||+++.++
T Consensus 185 tK~l~g~~~~~gG~v~~~~ 203 (369)
T cd00614 185 TKYIGGHSDVIAGVVVGSG 203 (369)
T ss_pred ceeccCCCCceEEEEEeCc
Confidence 99998754 58888866
No 181
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=1.8e-17 Score=157.26 Aligned_cols=161 Identities=11% Similarity=0.027 Sum_probs=122.5
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceee
Q 018401 86 GNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 165 (356)
Q Consensus 86 ~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 165 (356)
+++....++ +.++++-|.+.. ++++||++|+.+++.+++++||+|+++...|++...... ......|+++
T Consensus 60 ~nPt~~~le----~~la~LEg~~~a--~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~----~~l~~~Gi~v 129 (395)
T PRK08114 60 GTLTHFSLQ----EAMCELEGGAGC--ALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCS----KILSKLGVTT 129 (395)
T ss_pred CChhHHHHH----HHHHHHhCCCeE--EEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHH----HHHHhcCcEE
Confidence 334455555 788888887654 457889999998899999999999998877765543221 1122235555
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcC--CEEEEeccchhhhcccCCCCC
Q 018401 166 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQK--AIMLADMAHISGLVAAGVIPS 241 (356)
Q Consensus 166 ~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g--~~vivD~a~~~g~~~~~~~~~ 241 (356)
..+ + ..|.+++++++++ +||+|++. ++| ++.+.|+++|+++||++| +++++|.+|+.+.. .+...+
T Consensus 130 ~~v--d------~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~pl~~ 199 (395)
T PRK08114 130 TWF--D------PLIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKALDF 199 (395)
T ss_pred EEE--C------CCCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCHHHc
Confidence 444 2 2368899999987 89999997 888 889999999999999984 99999999988766 555556
Q ss_pred CCCCccEEEeCCCCcCCCCC--c-eEEEEec
Q 018401 242 PFEYADVVTTTTHKSLRGPR--G-AMIFFRK 269 (356)
Q Consensus 242 ~l~~~D~~~~s~~K~l~gp~--g-G~l~~~~ 269 (356)
+ +|+++.|+||||+|+. + |+++.++
T Consensus 200 G---aDivv~S~tKyl~Ghsdv~~G~v~~~~ 227 (395)
T PRK08114 200 G---IDISIQAGTKYLVGHSDAMIGTAVANA 227 (395)
T ss_pred C---CcEEEEcCcccccCCCcceeEEEEcCH
Confidence 6 9999999999999985 3 7666655
No 182
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.73 E-value=5.6e-17 Score=153.89 Aligned_cols=196 Identities=15% Similarity=0.062 Sum_probs=137.4
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCcccc-CCCchHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGG-SLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v-~~sgs~a~~ 123 (356)
+.|+|..++++ ++|.+++++.+.+.... +|+.. . . .++++.+++++|++++++++ ++|+++++.
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~--~y~~~------~-~----~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~ 101 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSKIH--RYPEP------D-A----PELREALSKYTGVPVENIIVGGDGMDEVID 101 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHhhc--CCCCC------C-H----HHHHHHHHHHhCCCHHHEEEeCCCHHHHHH
Confidence 56899888775 57889998887765421 33322 1 1 34568888899999888888 555567777
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
.++.+++++||.|++++++|..+ ...+...|.++..+ +.+ +++.+|++++++.+.+ ++++++++ ++|
T Consensus 102 ~~~~~~~~~gd~vlv~~p~y~~~--------~~~~~~~g~~~~~~--~~~-~~~~~~~~~l~~~~~~-~~~~v~~~~p~n 169 (361)
T PRK00950 102 TLMRTFIDPGDEVIIPTPTFSYY--------EISAKAHGAKPVYA--KRE-EDFSLDVDSVLNAITE-KTKVIFLCTPNN 169 (361)
T ss_pred HHHHHhcCCCCEEEEcCCChHHH--------HHHHHHcCCEEEEe--ecC-CCCCcCHHHHHHHhcc-CCCEEEEeCCCC
Confidence 78888889999999998655332 22334456666555 443 4468999999998876 78998887 777
Q ss_pred -CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC--CccEEEeCCCCcCCCC--CceEEEEec
Q 018401 203 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~--~~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
+|.+.+.++|.++|+++|+++|+|++|..- ........ +. .--+++.|.+|.++.| +-|+++.++
T Consensus 170 ptG~~~~~~~l~~l~~~~~~~li~De~y~~~-~~~~~~~~-~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~ 239 (361)
T PRK00950 170 PTGNLIPEEDIRKILESTDALVFVDEAYVEF-AEYDYTPL-ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE 239 (361)
T ss_pred CCCCCcCHHHHHHHHHHCCcEEEEECchhhh-CccchHHH-HHhcCCEEEEEeehHhhcCchhhcchhcCCH
Confidence 899999999999999999999999998532 11111100 00 1237778999977533 238888766
No 183
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.73 E-value=1.2e-16 Score=152.22 Aligned_cols=224 Identities=14% Similarity=0.036 Sum_probs=148.8
Q ss_pred CCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHH
Q 018401 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 48 ~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~ 125 (356)
.++|..++++ +++.+++++.+.+.... +|+.. ... .+|+.++++++++++++++++|+++++..+
T Consensus 34 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~--~Y~~~-------~~~----~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~ 100 (369)
T PRK08153 34 RARIGANESGFGPSPSVIAAMREAAAEIW--KYGDP-------ENH----DLRHALAAHHGVAPENIMVGEGIDGLLGLI 100 (369)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHHHhh--cCCCC-------ccH----HHHHHHHHHhCCCHHHEEEcCCHHHHHHHH
Confidence 4689888875 58899999988764322 33322 122 455788888899888888898888999888
Q ss_pred HHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-C
Q 018401 126 YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-Y 203 (356)
Q Consensus 126 l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~ 203 (356)
+.++++|||.|++.+++|..+. ..+...|.++..+| .+ + ..+|++++++.+...++++++++ |+| |
T Consensus 101 ~~~~~~~gd~vlv~~p~y~~~~--------~~~~~~g~~~~~vp--~~-~-~~~~~~~l~~~~~~~~~~~i~l~~P~NPt 168 (369)
T PRK08153 101 VRLYVEPGDPVVTSLGAYPTFN--------YHVAGFGGRLVTVP--YR-D-DREDLDALLDAARRENAPLVYLANPDNPM 168 (369)
T ss_pred HHHhcCCCCEEEECCCcchHHH--------HHHHHcCCeEEEee--CC-C-CCCCHHHHHHHhcccCCcEEEEeCCCCCC
Confidence 8888999999999996664442 23344566665554 43 2 35789999877754478999887 888 9
Q ss_pred CCcccHHHHHHHHHHc--CCEEEEeccchhhhcccC-CCCC-CCCCccEEEeCCCCcCC--CCCceEEEEecCcchhccC
Q 018401 204 ARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAG-VIPS-PFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQ 277 (356)
Q Consensus 204 g~~~~l~~I~~la~~~--g~~vivD~a~~~g~~~~~-~~~~-~l~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~~~ 277 (356)
|.+.+.+++.++++.. +++||+|+++.. ....+ .... ....-.+++.|++|.++ |.+-|+++.++
T Consensus 169 G~~~~~~~l~~l~~~~~~~~~lI~DE~y~~-~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~-------- 239 (369)
T PRK08153 169 GSWHPAADIVAFIEALPETTLLVLDEAYCE-TAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAP-------- 239 (369)
T ss_pred CCCCCHHHHHHHHHhCCCCcEEEEeCchhh-hcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCH--------
Confidence 9999988887777644 899999999752 11111 1000 00012478999999874 33349998866
Q ss_pred CcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018401 278 GKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 314 (356)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~ 314 (356)
++.+.+..... ..+.+.+...++.++++
T Consensus 240 ------~~~~~l~~~~~---~~~~s~~~q~~~~~~l~ 267 (369)
T PRK08153 240 ------GTIKAFDKVRN---HFGMNRIAQAAALAALK 267 (369)
T ss_pred ------HHHHHHHHhhc---CCCCCHHHHHHHHHHhc
Confidence 44444433221 12345566666666663
No 184
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.73 E-value=1.7e-16 Score=155.32 Aligned_cols=213 Identities=12% Similarity=0.081 Sum_probs=142.3
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCC---C---CCCCCccCCCchhHHHHHHHHHHHHHHHcC----CCCCccccCC
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYS---E---GYPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGGSL 116 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~---~---~~~~~~~~~~~~~~~~l~~~~~~~la~~~g----~~~~~v~v~~ 116 (356)
..|+|..+||+.+..+++...+...+... . ......+|+...+...+++++.+++.+.+| +++++|++|+
T Consensus 39 g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~ 118 (468)
T PLN02450 39 GIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTA 118 (468)
T ss_pred eeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEcc
Confidence 46999999998766655555443311000 0 001122345455677899888888888766 5788888899
Q ss_pred CchHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccccc-ccceeeEEEecccCC-CCCCCCHHHHHHHhhh----
Q 018401 117 SGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLNE-STGYIDYDQLEKSATL---- 190 (356)
Q Consensus 117 sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~---- 190 (356)
|+++++..++.++++|||.|++++|.|..+.. .+. ..|++++.+ +.+. +++.+|++++++++.+
T Consensus 119 Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~--------~~~~~~g~~~v~v--~~~~~~~~~~~~~~le~~~~~~~~~ 188 (468)
T PLN02450 119 GATSANETLMFCLAEPGDAFLLPTPYYPGFDR--------DLKWRTGVEIVPI--HCSSSNGFQITESALEEAYQQAQKL 188 (468)
T ss_pred ChHHHHHHHHHHhCCCCCEEEECCCCCCchHH--------HHhhcCCcEEEEE--ecCCccCCcCCHHHHHHHHHHHHhc
Confidence 99999998999999999999999966644422 333 356555445 4432 4467889999988754
Q ss_pred -cCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc-C------CC-CCCC-----CCccEEEe
Q 018401 191 -FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA-G------VI-PSPF-----EYADVVTT 251 (356)
Q Consensus 191 -~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~-~------~~-~~~l-----~~~D~~~~ 251 (356)
.++|+|+++ |+| ||.+.+ +++|.++|+++++++|+|++++.-.... . .. ...+ ..--+++.
T Consensus 189 ~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~ 268 (468)
T PLN02450 189 NLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVY 268 (468)
T ss_pred CCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEE
Confidence 268888888 888 997776 5567788899999999999975211110 0 00 0000 01237889
Q ss_pred CCCCcCC--CCCceEEEEec
Q 018401 252 TTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 252 s~~K~l~--gp~gG~l~~~~ 269 (356)
|.+|.++ |.+-|+++..+
T Consensus 269 S~SK~~~l~GlRiG~li~~~ 288 (468)
T PLN02450 269 SLSKDLGLPGFRVGAIYSND 288 (468)
T ss_pred eccccCCCCCccEEEEEECC
Confidence 9999773 44559999875
No 185
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.73 E-value=3.1e-17 Score=156.52 Aligned_cols=155 Identities=16% Similarity=0.177 Sum_probs=115.7
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.+++.+++++|++. .++++||++++..++.+++++||+|+++...|++...... ......|..+..+ +.+
T Consensus 58 ~le~~la~l~g~~~--~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~----~~~~~~g~~v~~v--~~~-- 127 (380)
T TIGR01325 58 AFEERIAALEGAER--AVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFIS----EILPRFGIEVSFV--DPT-- 127 (380)
T ss_pred HHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHH----HHHHHhCCEEEEE--CCC--
Confidence 44588899999854 3568999999998999999999999998877765432211 1122345445444 322
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
|++++++++++ ++++|+++ ++| +|...|+++|.++|+++|+++|+|++++.+.....+ .. ++|+++.|+
T Consensus 128 ----d~~~l~~~i~~-~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~pl-~~---g~Divv~S~ 198 (380)
T TIGR01325 128 ----DLNAWEAAVKP-NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQPL-KL---GADVVVYSA 198 (380)
T ss_pred ----CHHHHHHhcCC-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch-hh---CCCEEEeec
Confidence 78999998876 89999997 777 899999999999999999999999998754332111 12 489999999
Q ss_pred CCcCCCCC---ceEEEEec
Q 018401 254 HKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp~---gG~l~~~~ 269 (356)
+|+++|+. ||+++.++
T Consensus 199 sK~l~g~g~~~gG~vv~~~ 217 (380)
T TIGR01325 199 TKHIDGQGRVMGGVIAGSE 217 (380)
T ss_pred cceecCCCCeEEEEEEeCH
Confidence 99998763 47777666
No 186
>PRK06460 hypothetical protein; Provisional
Probab=99.73 E-value=5.5e-17 Score=154.46 Aligned_cols=156 Identities=19% Similarity=0.189 Sum_probs=111.4
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
+++++.+++++|++++ +++++|++++..++.++++|||+|+++.+.|+.. |..+...+...|+.+..+ +.+
T Consensus 48 ~~L~~~lA~l~g~~~~--v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~t----y~~~~~~~~~~G~~v~~~--~~~- 118 (376)
T PRK06460 48 LELTKKIVELENAEMG--VAFSSGMGAISTTALALLKPGNSVLVHRDMFGRS----YRFFTDYLKNWGVNVDAS--NPG- 118 (376)
T ss_pred HHHHHHHHHHhCCCcE--EEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcH----HHHHHHHHHhhCcEEEEE--CCC-
Confidence 3456899999999764 3456778888888899999999999987555433 322222344456555444 332
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
+.+.+++.+.+ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++++.+.. ..+.. .++|+++.|
T Consensus 119 -----~~~~l~~~~~~-~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~---~~~l~-~~~divv~S 188 (376)
T PRK06460 119 -----SDNIIEKAKSK-RYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN---QKPLE-LGADIVVHS 188 (376)
T ss_pred -----CHHHHHHhcCC-CceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc---CChhh-cCCCEEEee
Confidence 23344554444 89999998 778 89999999999999999999999999875421 11111 148999999
Q ss_pred CCCcCCCCC---ceEEEEec
Q 018401 253 THKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 253 ~~K~l~gp~---gG~l~~~~ 269 (356)
++|+++|+. +|+++.++
T Consensus 189 ~sK~l~G~~~~~~G~~~~~~ 208 (376)
T PRK06460 189 ASKFLAGHNDVIAGLAAGYG 208 (376)
T ss_pred cceeccCCCCceEEEEecCH
Confidence 999998765 58777665
No 187
>PRK05939 hypothetical protein; Provisional
Probab=99.73 E-value=4.2e-17 Score=155.99 Aligned_cols=157 Identities=11% Similarity=0.087 Sum_probs=118.5
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeE
Q 018401 87 NEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 166 (356)
Q Consensus 87 ~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 166 (356)
++....++ +.++++.|.+.. +++++|++++..++.++++|||+|+++++.|+++...+. .+...|++++
T Consensus 46 ~p~~~~lE----~~la~leg~~~~--v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~-----~l~~~G~~v~ 114 (397)
T PRK05939 46 TPTTAALE----AKITKMEGGVGT--VCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFG-----TLRGLGVEVT 114 (397)
T ss_pred CHHHHHHH----HHHHHHhCCCeE--EEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHH-----HHHhcCCEEE
Confidence 34445555 888999998764 447778899998999999999999999988876643322 1223465554
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC
Q 018401 167 TMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE 244 (356)
Q Consensus 167 ~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~ 244 (356)
.+ +. .|++++++++.+ +|++|+++ ++| +|.+.|+++|+++|+++|+++++|++|+.+.. .+....
T Consensus 115 ~v--~~------~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~-~~~~~~--- 181 (397)
T PRK05939 115 MV--DA------TDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL-FRPKDV--- 181 (397)
T ss_pred EE--CC------CCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc-cCcccc---
Confidence 44 32 378999999987 89999997 777 89999999999999999999999999977642 222223
Q ss_pred CccEEEeCCCCcCCCCCc--eEEEE
Q 018401 245 YADVVTTTTHKSLRGPRG--AMIFF 267 (356)
Q Consensus 245 ~~D~~~~s~~K~l~gp~g--G~l~~ 267 (356)
++|+++.|+||+++|+.. |.+++
T Consensus 182 gaDivv~S~sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 182 GASLVINSLSKYIAGHGNALGGAVT 206 (397)
T ss_pred CCEEEEecCeecccCCCCeEEEEEe
Confidence 499999999999987654 44444
No 188
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=3.1e-17 Score=156.97 Aligned_cols=155 Identities=15% Similarity=0.040 Sum_probs=116.9
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++++.+++++|.+ ++++++||++++.+++.++++|||+|+++++.|+++...+.. .....|+.++.+ +..
T Consensus 69 ~Le~~lA~l~g~~--~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~----~~~~~Gi~v~~v--d~~-- 138 (394)
T PRK07050 69 ALAQRLAEIEGGR--HALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEW----LARDFGITVRFY--DPL-- 138 (394)
T ss_pred HHHHHHHHHhCCC--eEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHH----HHHhcCeEEEEE--CCC--
Confidence 4558899999965 456699999999989999999999999999888765432211 122345545433 221
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
+.+++++++++ +||+|+++ ++| ++...++++|+++|+++|+++++|++|+.|..... ... |+|+++.|.
T Consensus 139 ----~~~~l~~~i~~-~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~~-l~~---GaDi~v~S~ 209 (394)
T PRK07050 139 ----IGAGIADLIQP-NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFKP-FEH---GVDISVQAL 209 (394)
T ss_pred ----CHHHHHHhcCC-CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccccCH-HHc---CCeEEEEEC
Confidence 45778888887 89999998 777 78999999999999999999999999988754211 112 489999999
Q ss_pred CCcCCCCC---ceEEEEec
Q 018401 254 HKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp~---gG~l~~~~ 269 (356)
+|+++|.. ||++++++
T Consensus 210 tK~~~g~~~~~gG~v~~~~ 228 (394)
T PRK07050 210 TKYQSGGSDVLMGATITAD 228 (394)
T ss_pred CceecCCCCeeEEEEEECC
Confidence 99997654 57677755
No 189
>PRK08175 aminotransferase; Validated
Probab=99.73 E-value=6.7e-16 Score=148.33 Aligned_cols=206 Identities=13% Similarity=0.098 Sum_probs=137.1
Q ss_pred HcCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCC-ccccCCCchH
Q 018401 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPE-KWGGSLSGSP 120 (356)
Q Consensus 46 ~~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~-~v~v~~sgs~ 120 (356)
.+.++|..+.+ .+++.+.+++.+.+..... ..|+...+..++++++++++.+.+|. +++ ++++|+|+++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~ 102 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDT------HGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKE 102 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCc------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence 34577765443 2466677777766543211 22343456678888888988887775 555 6777888888
Q ss_pred HHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEE
Q 018401 121 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVA 198 (356)
Q Consensus 121 a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~--~~~k~v~l 198 (356)
++..++.++++|||+|++++++|..+.. .+...|.++..+ +.+.+ ..+.++++++++. .++++|++
T Consensus 103 ~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v--~~~~~--~~~~~~l~~~l~~~~~~~~~v~i 170 (395)
T PRK08175 103 GLAHLMLATLDHGDTVLVPNPSYPIHIY--------GAVIAGAQVRSV--PLVEG--VDFFNELERAIRESYPKPKMMIL 170 (395)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCCeEEEE--ecccC--CCcHHHHHHHHhhccCCceEEEE
Confidence 8887888889999999999977654432 333456656555 44422 2247888887763 26889988
Q ss_pred c-CCC-CCCcccH---HHHHHHHHHcCCEEEEeccchhhhcccCC--CCCCCC---CccEEEeCCCCcCCCCC--ceEEE
Q 018401 199 G-ASA-YARLYDY---ERIRKVCNKQKAIMLADMAHISGLVAAGV--IPSPFE---YADVVTTTTHKSLRGPR--GAMIF 266 (356)
Q Consensus 199 ~-~~n-~g~~~~l---~~I~~la~~~g~~vivD~a~~~g~~~~~~--~~~~l~---~~D~~~~s~~K~l~gp~--gG~l~ 266 (356)
+ |+| +|.+.+. ++|.++|+++|+++|+|+++..-...... ....+. +..+++.|.+|.|+.|. .|+++
T Consensus 171 ~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~ 250 (395)
T PRK08175 171 GFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMV 250 (395)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeee
Confidence 8 788 8987776 68888999999999999997532211100 001111 23367899999874443 38888
Q ss_pred Eec
Q 018401 267 FRK 269 (356)
Q Consensus 267 ~~~ 269 (356)
.++
T Consensus 251 ~~~ 253 (395)
T PRK08175 251 GNP 253 (395)
T ss_pred CCH
Confidence 766
No 190
>PRK15029 arginine decarboxylase; Provisional
Probab=99.73 E-value=3.1e-17 Score=165.43 Aligned_cols=203 Identities=18% Similarity=0.103 Sum_probs=146.1
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++.+..|+.||++.. +.+++|+|.+|.+++++++++||+|++....|.|++. ++.+.|+..+.++-..+ +
T Consensus 209 eAq~~aA~~fgA~~t-~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~--------al~L~ga~Pvyl~P~~~-~ 278 (755)
T PRK15029 209 ESEKYAARVFGADRS-WSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ--------GLILTGAKPVYMVPSRN-R 278 (755)
T ss_pred HHHHHHHHHhCCCcE-EEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCCeEEEeccccc-c
Confidence 466889999999865 3338888899999999999999999999999988876 56677877665542222 2
Q ss_pred CC---CCC-----HHHHHHHhhhc-CCc--------EEEEc-CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccC
Q 018401 176 TG---YID-----YDQLEKSATLF-RPK--------LIVAG-ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 237 (356)
Q Consensus 176 ~~---~~d-----~~~l~~~i~~~-~~k--------~v~l~-~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~ 237 (356)
.+ .++ .+.+++++.++ .++ +++++ |+-.|.+.++++|+++|++++++|++|+||++......
T Consensus 279 ~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~ 358 (755)
T PRK15029 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNP 358 (755)
T ss_pred cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECccccccccCc
Confidence 21 334 88999988652 234 78887 55589999999999999999999999999976542211
Q ss_pred -CCC-CCC-------CCcc-EEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHH
Q 018401 238 -VIP-SPF-------EYAD-VVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTI 306 (356)
Q Consensus 238 -~~~-~~l-------~~~D-~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 306 (356)
+.. ..+ .|+| +++.|+||+|.+... ++|.++.+-. .+ + .++++....-...++|+++.+
T Consensus 359 ~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~-------~i--d-~~r~~~~l~~~qSTSPSY~Lm 428 (755)
T PRK15029 359 IYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRG-------AI--N-FSRFNQAYMMHATTSPLYAIC 428 (755)
T ss_pred cccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCcc-------cc--C-HHHHHHHHHHHcCCCcHHHHH
Confidence 111 222 3688 999999999988877 6777754200 00 1 123333322223478999999
Q ss_pred HHHHHHHHHHhc
Q 018401 307 TGLAVALKQVCT 318 (356)
Q Consensus 307 ~al~~Al~~~~~ 318 (356)
++|..|.+++..
T Consensus 429 ASLD~ar~~m~~ 440 (755)
T PRK15029 429 ASNDVAVSMMDG 440 (755)
T ss_pred HHHHHHHHHHhh
Confidence 999999998875
No 191
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.73 E-value=3.1e-16 Score=151.22 Aligned_cols=224 Identities=17% Similarity=0.138 Sum_probs=147.1
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC--CCCee
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK--PHDRI 136 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~--~gd~V 136 (356)
+|+|++++.+.+.. +..+..+++...++ .....++++.+++++|.+ ..++++||++++..++.++.. +||.|
T Consensus 61 ~p~v~~a~~~~~~~-~~~~~~~s~~~~~~---~~~~~~le~~la~~~g~~--~~~~~~SG~~An~~ai~~l~~~~~g~~I 134 (406)
T PRK13393 61 HPAVLAAMHEALDT-CGAGAGGTRNISGT---NHYHVLLEAELADLHGKE--AALLFTSGYVSNWAALSTLGSRLPGCVI 134 (406)
T ss_pred CHHHHHHHHHHHHH-cCCCCcccccccCC---hHHHHHHHHHHHHHhCCC--cEEEeCCcHHHHHHHHHHhhcCCCCCEE
Confidence 79999999999875 43333233222221 123345668999999974 335577888899988887754 78888
Q ss_pred eecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh---cCCcEEEEc-CCC-CCCcccHHH
Q 018401 137 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAG-ASA-YARLYDYER 211 (356)
Q Consensus 137 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~---~~~k~v~l~-~~n-~g~~~~l~~ 211 (356)
++....|+++..++ ...|.+...+ +. .|++++++.+.. .++++|+++ +.| +|.+.|+++
T Consensus 135 ~~~~~~H~s~~~~~--------~~~g~~~~~~--~~------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~ 198 (406)
T PRK13393 135 LSDELNHASMIEGI--------RHSRAEKRIF--RH------NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAE 198 (406)
T ss_pred EEccchhHHHHHHH--------HHcCCeEEEe--CC------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHH
Confidence 88888888776533 2334333323 22 267777776652 256788887 444 899999999
Q ss_pred HHHHHHHcCCEEEEeccchhhhcc-cCC---CCCCC-CCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHH
Q 018401 212 IRKVCNKQKAIMLADMAHISGLVA-AGV---IPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYE 286 (356)
Q Consensus 212 I~~la~~~g~~vivD~a~~~g~~~-~~~---~~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~ 286 (356)
|.++|+++|+++++|++|+.|... .+. ...++ ...|+++.++.|++++ .||+++.++ ++.
T Consensus 199 i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~-~GG~~~~~~--------------~~~ 263 (406)
T PRK13393 199 ICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGV-MGGYITGSA--------------ALC 263 (406)
T ss_pred HHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcc-cCceeeCCH--------------HHH
Confidence 999999999999999999977642 111 01111 1368888899998854 468777665 444
Q ss_pred HhhccccCCCCC-CCCcHHHHHHHHHHHHHHhcc
Q 018401 287 EKINQAVFPGLQ-GGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 287 ~~~~~~~~~~~~-gt~~~~~~~al~~Al~~~~~~ 319 (356)
+.+.....+..+ ++.+....+++.++++.+.+.
T Consensus 264 ~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~ 297 (406)
T PRK13393 264 DFIRSFASGFIFTTSLPPAVAAGALASVRHLKAS 297 (406)
T ss_pred HHHHHhCcCceecCccCHHHHHHHHHHHHHHhhC
Confidence 444332222222 455666677788999887653
No 192
>PRK06855 aminotransferase; Validated
Probab=99.72 E-value=6.7e-16 Score=149.92 Aligned_cols=205 Identities=15% Similarity=0.069 Sum_probs=138.4
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCch
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGS 119 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs 119 (356)
+.++|..+++ .+|+.+.+++.+.+..... ..|+...+..++++++.+++.+.+|+ ++++|++|+|++
T Consensus 33 ~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~------~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~ 106 (433)
T PRK06855 33 KITWENIGDPIAKGEKIPDWMKEIVAELVMDDKS------YGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLG 106 (433)
T ss_pred cccccccCCCcccCCCCCHHHHHHHHHHhhcCCC------CCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHH
Confidence 4577766555 5688888888887643211 22344456788998899999888775 677888899999
Q ss_pred HHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhh-cCCcEEE
Q 018401 120 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATL-FRPKLIV 197 (356)
Q Consensus 120 ~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~-~~~k~v~ 197 (356)
+++..++. +++|||.|++.+|+|..+... .....|..++.+ ++++ +++.+|+++|++++.. .++++++
T Consensus 107 ~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~-------~~~~~g~~~v~v--~~~~~~~~~~d~~~l~~~~~~~~~~~~i~ 176 (433)
T PRK06855 107 DAIAKIYG-LLRREARVIGPSPAYSTHSSA-------EAAHAGYPPVTY--RLDPENNWYPDLDDLENKVKYNPSIAGIL 176 (433)
T ss_pred HHHHHHHH-hcCCCCeEEEeCCCCchHHHH-------HHHhcCCeEEEE--ecccccCCCCCHHHHHHHHhcCCCceEEE
Confidence 88886764 789999999999776543210 011234444334 5543 3457899999999863 2578887
Q ss_pred Ec-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCC---C--CCccEEEeCCCCcCC--CCCceEE
Q 018401 198 AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---F--EYADVVTTTTHKSLR--GPRGAMI 265 (356)
Q Consensus 198 l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~---l--~~~D~~~~s~~K~l~--gp~gG~l 265 (356)
++ |+| ||.+.+ +++|.++|++||++||+|+++.--... +....+ + ++.-+++.|.+|.++ |-+.|++
T Consensus 177 l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~-~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~i 255 (433)
T PRK06855 177 LINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYN-GKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWI 255 (433)
T ss_pred EECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC-CCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEE
Confidence 76 888 997776 557778899999999999997422111 100001 1 112388899999874 4444999
Q ss_pred EEe
Q 018401 266 FFR 268 (356)
Q Consensus 266 ~~~ 268 (356)
+..
T Consensus 256 i~p 258 (433)
T PRK06855 256 EVY 258 (433)
T ss_pred EEe
Confidence 874
No 193
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.72 E-value=2.5e-16 Score=149.26 Aligned_cols=199 Identities=13% Similarity=0.040 Sum_probs=135.7
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.++|..++++ +||.+.+++.+.+... .+|+.. +... +|+.++++++++++++++++|+++++..
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~-------~~~~----lr~~ia~~~~~~~~~I~it~G~~~al~~ 97 (357)
T PRK14809 31 DLVKLSSNENPHGPSPAAVEAIREAAERV--HSYPKA-------SHAD----LTAALADRWDVSPEQVWLANGGDGALDY 97 (357)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhh--hcCCCC-------CHHH----HHHHHHHHhCCCcceEEECCCHHHHHHH
Confidence 56899888775 5788999988776542 234321 2333 4577788889999998889999999988
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n- 202 (356)
+++++++|||.|++++|+|..+ .......|..++.++++.+ +++.+|.+++++.. + ++|+|+++ ++|
T Consensus 98 ~~~~~~~~gd~V~v~~P~y~~~--------~~~~~~~g~~~~~~~l~~~-~~~~~~~~~~~~~~-~-~~k~i~l~~p~NP 166 (357)
T PRK14809 98 LARAMLDPGDTVLVPDPGFAYY--------GMSARYHHGEVREYPVSKA-DDFEQTADTVLDAY-D-GERIVYLTSPHNP 166 (357)
T ss_pred HHHHhcCCCCEEEEeCCChHHH--------HHHHHHcCCeEEEEecccC-cCCCcCHHHHHHhh-c-CCcEEEEeCCCCC
Confidence 8899999999999999655322 2233455666766655432 34577888877765 3 68899888 778
Q ss_pred CCCcccHHHHHHHHHHc--CCEEEEeccchhhhcccCC-CCCCCCCccEEEeCCCCcCC--CCCceEEEEec
Q 018401 203 YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGV-IPSPFEYADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~--g~~vivD~a~~~g~~~~~~-~~~~l~~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
||.+.+.+++.++++.. ++++|+|+++..-...... .......--+++.|++|.++ |.+-|+++.++
T Consensus 167 TG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~ 238 (357)
T PRK14809 167 TGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE 238 (357)
T ss_pred CCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCH
Confidence 99999988887777654 7899999997521110000 00000012377889999874 33349999876
No 194
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.72 E-value=2.4e-16 Score=147.37 Aligned_cols=256 Identities=11% Similarity=0.036 Sum_probs=162.4
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCC-Ccccc-CCCchHHHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP-EKWGG-SLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~-~~v~v-~~sgs~a~~~ 124 (356)
..+++++++..+|++|++++++.+.+....|..-...........++.+++.+.++++++++. -+++| ++|||.+..+
T Consensus 4 ~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea 83 (364)
T PRK12462 4 NQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSM 83 (364)
T ss_pred ccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHH
Confidence 357899999999999999999988763222211111111123355666788899999999943 35666 8889999999
Q ss_pred HHHhhcCCCCeee-ecCCCCCcccCcccccccccccccceeeEEEecccC-CCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 018401 125 VYTALLKPHDRIM-ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN-ESTGYIDYDQLEKSATLFRPKLIVAGASA 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~d~~~l~~~i~~~~~k~v~l~~~n 202 (356)
+...++.+||+++ +.. .+.++-.+ ...++..| .+..+.-... .....++.+++ .+.+ +.+.|.++.++
T Consensus 84 ~~~Nll~~g~~~~~~~~---tG~fg~r~---~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~-d~~~v~~t~NE 153 (364)
T PRK12462 84 IPMNFSRPGAAAPEYVT---TGYWSRKA---IGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDA-RAPFRHYVSNE 153 (364)
T ss_pred HHHHcCCCCCcEEEEEe---CCHHHHHH---HHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCC-CCcEEEEccCC
Confidence 9999999999765 333 11111111 11222223 3333311011 01124556654 2233 56777777444
Q ss_pred --CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCc
Q 018401 203 --YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGK 279 (356)
Q Consensus 203 --~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~ 279 (356)
+|...+ ++.+.+++++|+|++.+++..++++.. .|++.++++|+|+ |+| ++++++++........-
T Consensus 154 TstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~-----~dvi~agsQKnlg-P~Gltvvivs~~al~~~~~~~ 222 (364)
T PRK12462 154 TVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEA-----YGMVYAHAQKNLG-PAGVTVAIIRRALLERVPDTL 222 (364)
T ss_pred CCceEecC-----cccccCCCeEEEEcCchhhCCCCChHH-----ccEEEeeccccCC-CCceEEEEECHHHHhhccccC
Confidence 687765 333446899999999999988887765 4899999999996 999 99999986432211111
Q ss_pred chhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc-cccchhh
Q 018401 280 EVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL-ITFSHIH 326 (356)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~-~~~~~~~ 326 (356)
+..+++....... ..+.||++..+.++..+++++.++ .+.+.+.
T Consensus 223 p~~ldy~~~~~~~---s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~ 267 (364)
T PRK12462 223 PPMLDFRTHVEHR---SNYNTPPVFAIYVMALVLRWIRDEIGGVHAMR 267 (364)
T ss_pred CchhhHHHHHhcC---CCCCCchHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 2122333333322 234699999999999999999886 3655433
No 195
>PRK03321 putative aminotransferase; Provisional
Probab=99.72 E-value=1.1e-16 Score=151.47 Aligned_cols=197 Identities=15% Similarity=0.101 Sum_probs=137.0
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.|+|..++++ +++.+++++.+.+.. . ..|+. .+.. .+++.++++++++++++++++|+++++..
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~-------~g~~----~lr~~ia~~~~~~~~~I~~~~G~~~~l~~ 89 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG-V-NRYPD-------MGAV----ELRAALAEHLGVPPEHVAVGCGSVALCQQ 89 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh-c-CcCCC-------CcHH----HHHHHHHHHhCcCHHHEEECCCHHHHHHH
Confidence 35888877764 577899999887653 1 12321 2333 45588888889988888888888888887
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n- 202 (356)
++.++++|||+|+++.+.+..+ ...++..|.++..+ +.+ +++.+|++++++++.+ ++++|+++ ++|
T Consensus 90 ~~~~~~~~gd~Vli~~p~y~~~--------~~~~~~~g~~~~~v--~~~-~~~~~~~~~l~~~~~~-~~~~v~l~~p~NP 157 (352)
T PRK03321 90 LVQATAGPGDEVIFAWRSFEAY--------PILVQVAGATPVQV--PLT-PDHTHDLDAMAAAITD-RTRLIFVCNPNNP 157 (352)
T ss_pred HHHHhcCCCCEEEeCCCCHHHH--------HHHHHHcCCEEEEc--cCC-CCCCCCHHHHHHhhcc-CCCEEEEeCCCCC
Confidence 8888899999999987554322 11234456555444 554 3467899999999876 89999887 777
Q ss_pred CCCcccHHHHHHHHHH--cCCEEEEeccchhhhcccCCCCCCC---C--CccEEEeCCCCcCC--CCCceEEEEec
Q 018401 203 YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~--~g~~vivD~a~~~g~~~~~~~~~~l---~--~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
+|.+.+.++|.++|++ +++++|+|+++..-... +....++ . .--+++.|.+|.|+ |.+.|+++.++
T Consensus 158 tG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 232 (352)
T PRK03321 158 TGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRD-DDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP 232 (352)
T ss_pred cCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccC-cCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH
Confidence 8999999999999987 59999999997532211 1000000 0 12377889999874 23349988876
No 196
>PLN02880 tyrosine decarboxylase
Probab=99.72 E-value=9.8e-17 Score=157.07 Aligned_cols=173 Identities=12% Similarity=0.043 Sum_probs=123.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCC-------ccccCCCchHHHHHHHHhhcC-----------CCCeeeecCCCCCcccCc
Q 018401 88 EYIDMAESLCQKRALEAFRLDPE-------KWGGSLSGSPSNFQVYTALLK-----------PHDRIMALDLPHGGHLSH 149 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~-------~v~v~~sgs~a~~~~l~al~~-----------~gd~Vl~~~~~~~~~~~~ 149 (356)
....++|+.+.+|+++++|.+.. .-++++|||++|..++.+.-+ +.-.|++++..|.++..
T Consensus 118 p~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~K- 196 (490)
T PLN02880 118 PAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQK- 196 (490)
T ss_pred cccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHH-
Confidence 34568999999999999999653 234588999988766654311 11245556666766543
Q ss_pred cccccccccccccee---eEEEecccCC-CCCCCCHHHHHHHhhhcC-----CcEEEEc--CCCCCCcccHHHHHHHHHH
Q 018401 150 GYQTDTKKISAVSIF---FETMPYRLNE-STGYIDYDQLEKSATLFR-----PKLIVAG--ASAYARLYDYERIRKVCNK 218 (356)
Q Consensus 150 ~~~~~~~~~~~~g~~---~~~v~~~~~~-~~~~~d~~~l~~~i~~~~-----~k~v~l~--~~n~g~~~~l~~I~~la~~ 218 (356)
.+.+.|.. ++.|| .+. +++.+|++.|++++.+.+ +-+|+.+ .+++|.+.|+++|+++|++
T Consensus 197 -------aa~~lGlg~~~v~~Vp--~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~ 267 (490)
T PLN02880 197 -------ACQIAGIHPENCRLLK--TDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKS 267 (490)
T ss_pred -------HHHHcCCCHHHEEEee--cCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHH
Confidence 44455653 45564 442 356899999999986421 3344444 4458999999999999999
Q ss_pred cCCEEEEeccchhhhcccCC---CCCCCCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 219 QKAIMLADMAHISGLVAAGV---IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 219 ~g~~vivD~a~~~g~~~~~~---~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
||+|++||+||+.+.....- .-.++.++|.+++++|||++.|.+ |++++++.
T Consensus 268 ~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~ 323 (490)
T PLN02880 268 NGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDR 323 (490)
T ss_pred cCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCH
Confidence 99999999999877654321 112334699999999999999999 99999863
No 197
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.72 E-value=2.8e-16 Score=151.22 Aligned_cols=207 Identities=14% Similarity=0.043 Sum_probs=138.2
Q ss_pred cCCeeecCCC------CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC-CCCCccccCCCch
Q 018401 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGGSLSGS 119 (356)
Q Consensus 47 ~~i~L~~~~~------~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g-~~~~~v~v~~sgs 119 (356)
+.++|..+++ ++++.+++++.+.+......+ |+...+..++++++.+++.+..+ ++++++++++|++
T Consensus 32 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~ 105 (401)
T TIGR01264 32 PMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNG------YAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCS 105 (401)
T ss_pred CeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCC------CCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChH
Confidence 4588886554 467889999988776521112 23334456677666565554211 4777888899999
Q ss_pred HHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 018401 120 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 199 (356)
Q Consensus 120 ~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~ 199 (356)
+++..++.+++++||+|++++++|..+ ...+...|..+..++++.+ +++.+|++.+++.+.+ ++++|+++
T Consensus 106 ~al~~~~~~l~~~gd~v~i~~P~y~~~--------~~~~~~~g~~v~~~~~~~~-~~~~~d~~~l~~~~~~-~~~~v~~~ 175 (401)
T TIGR01264 106 HAIEMCIAALANAGQNILVPRPGFPLY--------ETLAESMGIEVKLYNLLPD-KSWEIDLKQLESLIDE-KTAALIVN 175 (401)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCChhH--------HHHHHHcCCEEEEeecCCc-cCCCCCHHHHHHHhcc-CceEEEEc
Confidence 999989999999999999998655433 2244456766655543222 3468999999998876 78999887
Q ss_pred -CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC-CCC-CCCCC--ccEEEeCCCCcCCC--CCceEEEEe
Q 018401 200 -ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-VIP-SPFEY--ADVVTTTTHKSLRG--PRGAMIFFR 268 (356)
Q Consensus 200 -~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~-~~~-~~l~~--~D~~~~s~~K~l~g--p~gG~l~~~ 268 (356)
|+| ||.+.+ +++|.++|+++|+++|+|+++.--..... ... ..+.. --+++.|++|.++. .+-|+++..
T Consensus 176 ~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~ 255 (401)
T TIGR01264 176 NPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIH 255 (401)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEec
Confidence 877 887765 77888899999999999999742111110 000 01111 13788999997543 333999986
Q ss_pred c
Q 018401 269 K 269 (356)
Q Consensus 269 ~ 269 (356)
+
T Consensus 256 ~ 256 (401)
T TIGR01264 256 D 256 (401)
T ss_pred C
Confidence 4
No 198
>PRK10534 L-threonine aldolase; Provisional
Probab=99.72 E-value=1.6e-16 Score=149.21 Aligned_cols=198 Identities=16% Similarity=0.177 Sum_probs=127.3
Q ss_pred CeeecCCCC-CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHH
Q 018401 49 LELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYT 127 (356)
Q Consensus 49 i~L~~~~~~-~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~ 127 (356)
|+|.+++++ ++|.+++++.+..... ..|++.....+ +++.+++++|+++. ++++||++++..++.
T Consensus 2 ~~~~~~~~~~p~~~~~~a~~~~~~~~--------~~Y~~~~~~~~----L~~~la~~~g~~~~--~v~~~g~~a~~~~l~ 67 (333)
T PRK10534 2 IDLRSDTVTRPSRAMLEAMMAAPVGD--------DVYGDDPTVNA----LQDYAAELSGKEAA--LFLPTGTQANLVALL 67 (333)
T ss_pred cccccccCCCCCHHHHHHHHhccCCC--------cccCCCHHHHH----HHHHHHHHhCCCeE--EEeCchHHHHHHHHH
Confidence 677777776 5788999987644331 11222233344 45888999998775 467777777777777
Q ss_pred hhcCCCCeeeecCCCCCcccCcccccccccccccc-eeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEcCC
Q 018401 128 ALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS-IFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAGAS 201 (356)
Q Consensus 128 al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~d~~~l~~~i~~~-----~~k~v~l~~~ 201 (356)
+++.+||+|+++.+.|...+... ++...+ ... ++++.+ +++.+|+++|++++.+. ++++|+++.+
T Consensus 68 ~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~~~~~--~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np 138 (333)
T PRK10534 68 SHCERGEEYIVGQAAHNYLYEAG------GAAVLGSIQP--QPIDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSLENT 138 (333)
T ss_pred HhcCCCCeeEEechhhhhHhcCC------chHHhcCceE--EeecCC-CCCCCCHHHHHHhhcccCcCcccceEEEEecC
Confidence 88999999998776554221110 111222 233 444555 45789999999988642 4889998844
Q ss_pred CCCCcccHHH---HHHHHHHcCCEEEEeccchhhhcc-cCCCCCCC-CCccEEEeCCCCcCCCCCceEEEEec
Q 018401 202 AYARLYDYER---IRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 269 (356)
Q Consensus 202 n~g~~~~l~~---I~~la~~~g~~vivD~a~~~g~~~-~~~~~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~ 269 (356)
++|.+.+.++ |.++|+++++++++|+|+..+... .+.....+ ...|.++.+++|.++.+.||+++.++
T Consensus 139 ~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~ 211 (333)
T PRK10534 139 HNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNR 211 (333)
T ss_pred CCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCH
Confidence 4697777654 567889999999999998754321 11110000 12476667899988766666676665
No 199
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=8.8e-17 Score=155.18 Aligned_cols=153 Identities=15% Similarity=0.122 Sum_probs=115.7
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.+.+.++++.|.+.. ++++||++++..++.+++++||+|+++.+.|++.+..+. ..+...|++++.+ +.
T Consensus 68 ~Le~~lA~leg~~~a--l~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~----~~~~~~Gv~v~~v--d~--- 136 (431)
T PRK08248 68 VFEKRIAALEGGIGA--LAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFA----HTLPKLGITVKFV--DP--- 136 (431)
T ss_pred HHHHHHHHHhCCCcE--EEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHH----HHHHhCCEEEEEE--CC---
Confidence 344889999997543 569999999998999999999999999987766543221 1223346555444 32
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
.|++++++++++ ++++|+++ ++| +|.+.|+++|+++|+++|+++|+|++++.+.....+ .+ ++|+++.|+
T Consensus 137 ---~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl-~~---gaDivv~S~ 208 (431)
T PRK08248 137 ---SDPENFEAAITD-KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLLRPI-EH---GADIVVHSA 208 (431)
T ss_pred ---CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccCChh-Hc---CCCEEEEcC
Confidence 378999999987 89999987 777 899999999999999999999999998754332221 23 499999999
Q ss_pred CCcCCCCCc--eEEEE
Q 018401 254 HKSLRGPRG--AMIFF 267 (356)
Q Consensus 254 ~K~l~gp~g--G~l~~ 267 (356)
||+++|+.. |.+++
T Consensus 209 tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 209 TKFIGGHGTSIGGVIV 224 (431)
T ss_pred ccccCCCCCceEEEEE
Confidence 999988753 44444
No 200
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.71 E-value=3.2e-16 Score=149.46 Aligned_cols=204 Identities=10% Similarity=0.005 Sum_probs=137.6
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccC-CCCCCCCccCCCchhHHHHHHHHHHHHHHHcC----CCCCccccCCCch
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKY-SEGYPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGGSLSGS 119 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g----~~~~~v~v~~sgs 119 (356)
+.++|..++++ +|+.+++++.+.+.... ..+|+ . .+...+++++.+++.+.++ +++++|++|+|++
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~------~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~ 101 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYP------D-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSD 101 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCC------C-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChH
Confidence 35788888885 68899999988766421 11232 1 3456677666666665542 6788888898999
Q ss_pred HHHHHHHHhhcCCCC-eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh---cCCcE
Q 018401 120 PSNFQVYTALLKPHD-RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKL 195 (356)
Q Consensus 120 ~a~~~~l~al~~~gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~---~~~k~ 195 (356)
+++..++.+++.+|| .|++++|+|. .+...++..|+++..+ +.+.+++.+|+++|++++.+ .++|+
T Consensus 102 ~al~~~~~~~~~~g~~~Vlv~~P~y~--------~~~~~~~~~g~~~~~~--~~~~~~~~~d~~~l~~~~~~~~~~~~k~ 171 (374)
T PRK02610 102 ELIRSLLIATCLGGEGSILVAEPTFS--------MYGILAQTLGIPVVRV--GRDPETFEIDLAAAQSAIEQTQNPPVRV 171 (374)
T ss_pred HHHHHHHHHHcCCCCCeEEEcCCChH--------HHHHHHHHcCCEEEEe--cCCcccCCCCHHHHHHHHHhhcCCCceE
Confidence 998877788888886 7999995553 3333455667666555 55534578999999998864 47999
Q ss_pred EEEc-CCC-CCCcccHHHHHHHHH-HcCCEEEEeccchhhhcccCCCCCCCCC--ccEEEeCCCCcCC--CCCceEEEEe
Q 018401 196 IVAG-ASA-YARLYDYERIRKVCN-KQKAIMLADMAHISGLVAAGVIPSPFEY--ADVVTTTTHKSLR--GPRGAMIFFR 268 (356)
Q Consensus 196 v~l~-~~n-~g~~~~l~~I~~la~-~~g~~vivD~a~~~g~~~~~~~~~~l~~--~D~~~~s~~K~l~--gp~gG~l~~~ 268 (356)
|+++ |+| ||...+.+++.++++ .+++++|+|+++.-- .. ......+.. --+++.|++|+++ |.+-|+++.+
T Consensus 172 i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~-~~-~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~ 249 (374)
T PRK02610 172 VFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEF-SQ-TTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGH 249 (374)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEecccccc-Cc-cchHHHHhcCCCEEEEEecchhccCcccceeeeecC
Confidence 9987 777 998888777666653 248999999997421 10 000000111 2377899999874 3444999876
Q ss_pred c
Q 018401 269 K 269 (356)
Q Consensus 269 ~ 269 (356)
+
T Consensus 250 ~ 250 (374)
T PRK02610 250 P 250 (374)
T ss_pred H
Confidence 6
No 201
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=6e-17 Score=156.24 Aligned_cols=157 Identities=15% Similarity=0.106 Sum_probs=116.2
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
+.+++.++++.|++.. ++++||++++.+++.+++++||+|++++.+|+++...+.. .+...|++++.+ + +
T Consensus 72 ~~le~~la~l~g~~~~--v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~----~l~~~Gi~v~~v--d-~- 141 (437)
T PRK05613 72 EALENRIASLEGGVHA--VAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLV----TLNRLGIEVTFV--E-N- 141 (437)
T ss_pred HHHHHHHHHHhCCCeE--EEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHH----HHHhcCeEEEEE--C-C-
Confidence 3455899999998533 4467777888778888899999999999899877432221 122346555444 3 2
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
. .|++++++++++ +|++|++. ++| ++.+.|+++|+++|+++|+++|+|++|+.|... ..... |+|++++|
T Consensus 142 ~---~d~e~l~~~l~~-~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~-~p~~~---GaDivv~S 213 (437)
T PRK05613 142 P---DDPESWQAAVQP-NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALV-RPLEL---GADVVVAS 213 (437)
T ss_pred C---CCHHHHHHhCCc-cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCcccccc-ChHHh---CCCEEEee
Confidence 1 278999999987 89988876 666 789999999999999999999999999877552 22233 49999999
Q ss_pred CCCcCCCCC---ceEEEEec
Q 018401 253 THKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 253 ~~K~l~gp~---gG~l~~~~ 269 (356)
+||+++|+. ||+++.+.
T Consensus 214 ~~K~l~G~gd~~gG~vv~~~ 233 (437)
T PRK05613 214 LTKFYTGNGSGLGGVLIDGG 233 (437)
T ss_pred ccceecCCCcceeEEEEecC
Confidence 999887753 35555443
No 202
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.71 E-value=7.9e-17 Score=153.43 Aligned_cols=154 Identities=14% Similarity=0.114 Sum_probs=114.1
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.+++.++++.|.+.. ++++||+.++.+++ ++++|||+|+++++.|++.+..+.. .+...|+.++.+ +
T Consensus 54 ~Le~~la~l~g~~~a--l~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~----~~~~~gi~v~~v--d---- 120 (380)
T PRK06176 54 ALEELIADLEGGVKG--FAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDK----VLVKNGLSCTII--D---- 120 (380)
T ss_pred HHHHHHHHHhCCCCE--EEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHH----HHHhcCeEEEEc--C----
Confidence 344889999998764 45788888887444 6789999999999877655432211 122334444333 2
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
..|++++++++++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++++.+.....+ .+ ++|++++|+
T Consensus 121 --~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p~-~~---gaDivv~S~ 193 (380)
T PRK06176 121 --TSDLSQIKKAIKP-NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPL-LL---GADIVVHSG 193 (380)
T ss_pred --CCCHHHHHHhcCc-CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCcc-cc---CCCEEEecC
Confidence 2389999999987 89999987 887 899999999999999999999999998765432211 22 499999999
Q ss_pred CCcCCCCC---ceEEEEec
Q 018401 254 HKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp~---gG~l~~~~ 269 (356)
+|+++||. ||++++++
T Consensus 194 tK~l~g~~d~~gG~vv~~~ 212 (380)
T PRK06176 194 TKYLGGHSDVVAGLVTTNN 212 (380)
T ss_pred ceeccCCccceeeEEEecH
Confidence 99998875 47777755
No 203
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.71 E-value=5.1e-17 Score=153.77 Aligned_cols=155 Identities=15% Similarity=0.172 Sum_probs=112.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEE
Q 018401 89 YIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 168 (356)
Q Consensus 89 ~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 168 (356)
...+++ +.++++.|.+ ++++++||++++.+++ .++++||+|+++...|++... ++.... ..+ .+
T Consensus 55 ~~~~le----~~lA~leg~~--~~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~-~~~~~~----~~~-~~--- 118 (364)
T PRK07269 55 TRAKLE----ETLAAIESAD--YALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFR-WFNQQE----KEG-RF--- 118 (364)
T ss_pred cHHHHH----HHHHHHhCCC--eEEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHH-HHHHHH----hcC-cE---
Confidence 345555 7888888765 3456999999998777 467999999999877665432 110000 000 01
Q ss_pred ecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC-C
Q 018401 169 PYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-Y 245 (356)
Q Consensus 169 ~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~-~ 245 (356)
.. .+..|++++++++++ +||+|+++ |+| +|.+.|+++|+++|+++|+++++|++++.+... .++. +
T Consensus 119 --~~---~~~~d~~~l~~~i~~-~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~-----~pl~~g 187 (364)
T PRK07269 119 --HF---TYANTEEELIAAIEE-DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ-----RPIELG 187 (364)
T ss_pred --EE---EecCCHHHHHHhcCc-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-----CchhhC
Confidence 01 123589999999987 89999887 888 899999999999999999999999997655322 1222 5
Q ss_pred ccEEEeCCCCcCCCCC---ceEEEEecC
Q 018401 246 ADVVTTTTHKSLRGPR---GAMIFFRKG 270 (356)
Q Consensus 246 ~D~~~~s~~K~l~gp~---gG~l~~~~~ 270 (356)
+|++++|++|+++|+. ||+++++++
T Consensus 188 aDivv~S~tK~l~g~~d~~gG~v~~~~~ 215 (364)
T PRK07269 188 ADIVLHSATKYLSGHNDVLAGVVVTNDL 215 (364)
T ss_pred CcEEEecCceeccCCCcccceEEEeCcH
Confidence 9999999999998865 477777653
No 204
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=1.3e-16 Score=154.03 Aligned_cols=153 Identities=20% Similarity=0.193 Sum_probs=116.3
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.+.+.++++.|.+.. ++++||++++.+++.++++|||+|+++.+.|++....+.. .+...|..++.+ +.
T Consensus 67 ~le~~lA~l~g~~~a--l~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~----~~~~~G~~v~~v--d~--- 135 (427)
T PRK05994 67 VLEERVAALEGGTAA--LAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGH----AFKSFGWQVRWA--DA--- 135 (427)
T ss_pred HHHHHHHHHhCCCcE--EEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHH----HHHhcCcEEEEE--CC---
Confidence 345889999998753 4588999999989999999999999999888765432211 122345444433 32
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
.|++++++++++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+..... ... ++|+++.|+
T Consensus 136 ---~d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~~p-l~~---gaDivv~S~ 207 (427)
T PRK05994 136 ---DDPASFERAITP-RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLIRP-IEH---GADIVVHSL 207 (427)
T ss_pred ---CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccCCc-ccc---CCcEEEEcC
Confidence 278999999987 89999997 777 89999999999999999999999999987653321 123 499999999
Q ss_pred CCcCCCCCc--eEEEE
Q 018401 254 HKSLRGPRG--AMIFF 267 (356)
Q Consensus 254 ~K~l~gp~g--G~l~~ 267 (356)
||+++|+.+ |.+++
T Consensus 208 tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 208 TKFLGGHGNSMGGIIV 223 (427)
T ss_pred ccccCCCCCcEEEEEE
Confidence 999988765 44444
No 205
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.71 E-value=4.7e-16 Score=149.31 Aligned_cols=207 Identities=14% Similarity=0.128 Sum_probs=141.8
Q ss_pred CCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHHHH
Q 018401 48 GLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPSNF 123 (356)
Q Consensus 48 ~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a~~ 123 (356)
.++|..+.+ ++++.+.+++.+.+.... .....|+...+...+++.+++++.+.++. +++++++++|+++++.
T Consensus 35 ~~~l~~g~p~~~~~~~v~~a~~~~~~~~~----~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~ 110 (394)
T PRK06836 35 VFDFSLGNPSVPPPAAVKEALRELAEEED----PGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALN 110 (394)
T ss_pred eEEecCcCCCCCCCHHHHHHHHHHHhcCC----cCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHH
Confidence 477765544 356889998887765421 11122333455677877777777766554 7788888999999988
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
.++.+++++||.|+++++.|..+.. ..+..|++++.+ +.+++++.+|++++++++++ ++++|+++ ++|
T Consensus 111 ~~~~~l~~~gd~Vli~~p~~~~~~~--------~~~~~g~~v~~v--~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~N 179 (394)
T PRK06836 111 VALKAILNPGDEVIVFAPYFVEYRF--------YVDNHGGKLVVV--PTDTDTFQPDLDALEAAITP-KTKAVIINSPNN 179 (394)
T ss_pred HHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCCEEEEE--ecCCccCcCCHHHHHhhcCc-CceEEEEeCCCC
Confidence 8889999999999999966654422 233456666555 45534468999999999976 89999887 777
Q ss_pred -CCCccc---HHHHHHHHHH------cCCEEEEeccchhhhcccC-CCC--CCCCCccEEEeCCCCcCCCC--CceEEEE
Q 018401 203 -YARLYD---YERIRKVCNK------QKAIMLADMAHISGLVAAG-VIP--SPFEYADVVTTTTHKSLRGP--RGAMIFF 267 (356)
Q Consensus 203 -~g~~~~---l~~I~~la~~------~g~~vivD~a~~~g~~~~~-~~~--~~l~~~D~~~~s~~K~l~gp--~gG~l~~ 267 (356)
+|...+ +++|+++|++ ||+++|+|+++.. ....+ ... .....-.+++.|++|.|+.| +-|+++.
T Consensus 180 PtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~ 258 (394)
T PRK06836 180 PTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYRE-IVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAV 258 (394)
T ss_pred CCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccc-cccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEec
Confidence 897776 6677778888 8999999999742 11111 000 00112468899999987534 3388888
Q ss_pred ecC
Q 018401 268 RKG 270 (356)
Q Consensus 268 ~~~ 270 (356)
++.
T Consensus 259 ~~~ 261 (394)
T PRK06836 259 NPE 261 (394)
T ss_pred CHH
Confidence 663
No 206
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.71 E-value=7.2e-16 Score=148.89 Aligned_cols=245 Identities=15% Similarity=0.121 Sum_probs=162.9
Q ss_pred cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC-ccccCCCchHHHHHHHHhh--
Q 018401 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE-KWGGSLSGSPSNFQVYTAL-- 129 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~-~v~v~~sgs~a~~~~l~al-- 129 (356)
.....+++.+.+.+...+.... +.++. | .....+++.+..+++++++.+.+ .-.||+|||++|+.++.+.
T Consensus 69 ~~~~~~~~~a~~~~~~~~~~nl--~d~~~--~---p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~ 141 (460)
T COG0076 69 FCPTRVPPVAAELLVSALNKNL--GDPDE--S---PAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARE 141 (460)
T ss_pred cCCCCCHHHHHHHHHHHHhhcC--CCccc--C---hhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHH
Confidence 3444567778888877776532 22222 1 34678888999999999999533 2345999999998766553
Q ss_pred -cC--C---CC------eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE-E
Q 018401 130 -LK--P---HD------RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL-I 196 (356)
Q Consensus 130 -~~--~---gd------~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~-v 196 (356)
.. . +. +|+++...|.++.. .+.+.|.+.+.++. ++.+..+|++++++++.+..... |
T Consensus 142 ~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~K--------aa~~lG~~~~~v~~--~~~~~~id~~~l~~~i~~~t~~g~v 211 (460)
T COG0076 142 RWRKRALAESGKPGGKPNIVCSETAHFSFEK--------AARYLGLGLRRVPT--VPTDYRIDVDALEEAIDENTIGGVV 211 (460)
T ss_pred HHHHHhhhcccccCCCCeEEecCcchhHHHH--------HHHHhCCCceeEEe--ccCccccCHHHHHHHHHhhccCceE
Confidence 11 1 11 58888766655543 55567877777753 32257999999999999844441 4
Q ss_pred EEc--CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCC----CCCCCCccEEEeCCCCcCCCCCc-eEEEEec
Q 018401 197 VAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHKSLRGPRG-AMIFFRK 269 (356)
Q Consensus 197 ~l~--~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~----~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~ 269 (356)
+.+ .+.+|.+.|+++|+++|++++++++||+|.+...+++.-. ..+++++|.+++++|||+..|.| |++++++
T Consensus 212 V~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd 291 (460)
T COG0076 212 VGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRD 291 (460)
T ss_pred EEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEEC
Confidence 444 4448999999999999999999999999965544443221 24455899999999999999999 9999998
Q ss_pred CcchhccCCcchhhhHHHhh--ccccCCC-------CCCCCcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 270 GVKEINKQGKEVFYDYEEKI--NQAVFPG-------LQGGPHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~--~~~~~~~-------~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
+- .+.+.+ ...+.++ ..|+.+....+++-+.++.+=. .++.++-.
T Consensus 292 ~e------------~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~-eGy~~l~~ 345 (460)
T COG0076 292 EE------------ALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGR-EGYRKLLD 345 (460)
T ss_pred HH------------HhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCH-hHHHHHHH
Confidence 51 122211 1222221 1266666666667677776632 24444443
No 207
>PLN02242 methionine gamma-lyase
Probab=99.71 E-value=1.1e-16 Score=154.10 Aligned_cols=156 Identities=13% Similarity=0.075 Sum_probs=114.9
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++++.+++++|.+.. ++++||++++..++.+++++||+|+++.+.|+++...... ......|..++.+ +.
T Consensus 80 ~LE~~lA~l~g~~~~--l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~---~~~~~~G~~~~~~--d~--- 149 (418)
T PLN02242 80 NLGRQMAALEGTEAA--YCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAH---FLPRKCNITTTFV--DI--- 149 (418)
T ss_pred HHHHHHHHHhCCCeE--EEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHH---hhhhccCceEEEc--CC---
Confidence 444889999998765 4689999999999999999999999998766544321110 0112234433222 22
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
.|++++++++++.++++|+++ ++| +|.+.|+++|+++|+++|+++|+|++|+.... +.... ++|+++.|+
T Consensus 150 ---~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~--~~~~~---g~divv~S~ 221 (418)
T PLN02242 150 ---TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVL--SPARL---GADVVVHSI 221 (418)
T ss_pred ---CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCC--CHHHc---CCcEEEEeC
Confidence 389999999976349999997 888 89999999999999999999999999854322 22222 389999999
Q ss_pred CCcCCCCC---ceEEEEec
Q 018401 254 HKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp~---gG~l~~~~ 269 (356)
+|+++|+. ||+++.++
T Consensus 222 SK~l~g~g~~~gG~iv~~~ 240 (418)
T PLN02242 222 SKFISGGADIIAGAVCGPA 240 (418)
T ss_pred ccccCCCCCceEEEEEcCH
Confidence 99997664 57777665
No 208
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.70 E-value=1.3e-16 Score=153.99 Aligned_cols=154 Identities=16% Similarity=0.093 Sum_probs=115.6
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.+++.+++++|.+.. ++++||++|+.+++.+++++||+|+++...|++....... .+...|.++..+ + +
T Consensus 73 ~Le~~lA~l~g~~~a--v~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~----~l~~~Gi~v~~v--d-d-- 141 (436)
T PRK07812 73 VVEQRIAALEGGVAA--LLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHY----TLPKLGIEVSFV--E-D-- 141 (436)
T ss_pred HHHHHHHHHhCCCeE--EEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHH----HhhcCeEEEEEE--C-C--
Confidence 444889999998764 5688999999989999999999999998777765432111 111234444333 2 2
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
..|++++++++++ ++++|++. ++| +|.+.|+++|+++|+++|+++|+|++|+.+.....+ .. ++|+++.|+
T Consensus 142 --~~d~e~l~~ai~~-~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl-~~---GaDivv~S~ 214 (436)
T PRK07812 142 --PDDLDAWRAAVRP-NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPL-EH---GADIVVHSA 214 (436)
T ss_pred --CCCHHHHHHhCCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCch-hc---CCCEEEEec
Confidence 1389999999987 89999887 777 899999999999999999999999999876553222 22 499999999
Q ss_pred CCcCCCCCc--eEEEE
Q 018401 254 HKSLRGPRG--AMIFF 267 (356)
Q Consensus 254 ~K~l~gp~g--G~l~~ 267 (356)
||+++|+.+ |.+++
T Consensus 215 tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 215 TKYLGGHGTAIAGVIV 230 (436)
T ss_pred ccccCCCCCeEEEEEE
Confidence 999977654 44444
No 209
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.70 E-value=1.1e-15 Score=147.41 Aligned_cols=219 Identities=12% Similarity=0.018 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHH--HHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC--
Q 018401 33 EIADIIEHEKAR--QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-- 106 (356)
Q Consensus 33 ~~~~~~~~~~~~--~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g-- 106 (356)
++..++.+..+. ..+.++|..++++ +++.+.+++.+.+.... .......|+...+..++++++.+++.+..|
T Consensus 19 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~ 96 (409)
T PRK07590 19 EIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMG--TAETFRGYGPEQGYDFLREKIAENDYQARGCD 96 (409)
T ss_pred HHHHHHHHHhhhcCCCceEEecCcCCCCCCCHHHHHHHHHHHhccc--ccCCccCCCCCCCCHHHHHHHHHHHHHhcCCc
Confidence 344444444322 1356888887775 57888999988776421 001112233445667888888787776665
Q ss_pred CCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccccccccee---------eEEEecccCCC-C
Q 018401 107 LDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF---------FETMPYRLNES-T 176 (356)
Q Consensus 107 ~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~~~v~~~~~~~-~ 176 (356)
+++++|++|+|+.+++.. +..++.|||+|++.+|+|..+. ..+...|.. .+.++++++.+ +
T Consensus 97 ~~~~~I~it~Ga~~al~~-l~~~~~~gd~V~v~~P~Y~~~~--------~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~ 167 (409)
T PRK07590 97 ISADEIFISDGAKCDTGN-ILDIFGPDNTIAVTDPVYPVYV--------DTNVMAGRTGEANEDGRYSGIVYLPCTAENN 167 (409)
T ss_pred CChhhEEECCCHHHHHHH-HHHhcCCCCEEEEeCCCCcchH--------HHHHHcCCcccccccccccceeEeecccccC
Confidence 478888889888888885 4566799999999996665443 233444543 01233455422 2
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCC--CCCCC---c
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPFEY---A 246 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~--~~l~~---~ 246 (356)
+.+|+++ .++|+|+++ |+| ||.+.+ +++|.++|++|++++|+|+++..-........ ..+.+ .
T Consensus 168 ~~~d~~~-------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~ 240 (409)
T PRK07590 168 FVPELPE-------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGAREC 240 (409)
T ss_pred CcccCcc-------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccc
Confidence 3444321 378999887 888 897776 55677889999999999999752111111000 01111 2
Q ss_pred cEEEeCCCCcCC--CCCceEEEEec
Q 018401 247 DVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 247 D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
-+++.|++|.++ |.+-|+++..+
T Consensus 241 vi~~~SfSK~~~~pGlRiG~~i~~~ 265 (409)
T PRK07590 241 AIEFRSFSKTAGFTGTRCAYTVVPK 265 (409)
T ss_pred eEEEecCccccCCcCceeEEEEcCH
Confidence 367889999874 33349999876
No 210
>PRK05839 hypothetical protein; Provisional
Probab=99.70 E-value=2.7e-15 Score=143.13 Aligned_cols=200 Identities=15% Similarity=0.030 Sum_probs=133.1
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC--CCCCccccCCCchHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGGSLSGSPSN 122 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~v~v~~sgs~a~ 122 (356)
..++|..++++ +++.+.+++.+.... ...| +...+..++++++++++++.+| +++++|++|+|+++++
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y------~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al 96 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNAHL--LNKY------PKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVL 96 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHhhc--cCCC------CCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 56888877764 567788887765432 1123 3335567888889899999888 5788888898988988
Q ss_pred HHHHHhhc--CCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 018401 123 FQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG 199 (356)
Q Consensus 123 ~~~l~al~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~l~ 199 (356)
..++.+++ ++||.|+++.|.|.. +...+...|++++.+ +.+. +++.+|+++. .+ + ++|+|+++
T Consensus 97 ~~~~~~~~~~~~gd~vlv~~P~y~~--------~~~~~~~~g~~v~~v--~~~~~~~~~~d~~~~--~~-~-~~k~v~i~ 162 (374)
T PRK05839 97 FNFPQFVLFDKQNPTIAYPNPFYQI--------YEGAAIASRAKVLLM--PLTKENDFTPSLNEK--EL-Q-EVDLVILN 162 (374)
T ss_pred HHHHHHHhcCCCCCEEEECCCCchh--------hHHHHHhcCCEEEEe--ecccccCCcCCcchh--hh-c-cccEEEEe
Confidence 87777764 589999999955543 333445667667555 4442 2356665543 23 3 68999988
Q ss_pred -CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc-CCCC-CC------CC--CccEEEeCCCCcC--CCCCc
Q 018401 200 -ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA-GVIP-SP------FE--YADVVTTTTHKSL--RGPRG 262 (356)
Q Consensus 200 -~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~-~~~~-~~------l~--~~D~~~~s~~K~l--~gp~g 262 (356)
|+| ||.+.+ +++|.++|+++|+++|+|+++.- .... .... .. .. .--+++.|.+|.+ .|-+-
T Consensus 163 nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~-~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRi 241 (374)
T PRK05839 163 SPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSE-IYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRS 241 (374)
T ss_pred CCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhh-cccCCCCCCHhhhhcccCccccCcEEEEeccccccCCcccee
Confidence 888 997765 56777788999999999999652 1110 0000 00 00 1238889999975 34444
Q ss_pred eEEEEec
Q 018401 263 AMIFFRK 269 (356)
Q Consensus 263 G~l~~~~ 269 (356)
|+++.++
T Consensus 242 G~ii~~~ 248 (374)
T PRK05839 242 GFIAGDA 248 (374)
T ss_pred EEEecCH
Confidence 9999866
No 211
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.69 E-value=1.4e-15 Score=144.63 Aligned_cols=216 Identities=14% Similarity=0.044 Sum_probs=143.2
Q ss_pred hcccccccChHHHHHHHHHHHHH-HcCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHH
Q 018401 23 LNAPLEVVDPEIADIIEHEKARQ-WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (356)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (356)
+++++..++...+..+.+..+.. .+.++|..+++ +.++.+++++.+.... . +| +...+...+++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~--~Y------~~~~G~~~lr~~ia~ 73 (364)
T PRK07865 3 VSARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA-P--GY------PTTAGTPELREAIVG 73 (364)
T ss_pred ccccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh-C--CC------CCccCCHHHHHHHHH
Confidence 45777888888888776654333 35688877654 2367788888765432 1 23 222455688888889
Q ss_pred HHHHHcC---CCCCccccCCCchHHHHHHHHhh-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 100 RALEAFR---LDPEKWGGSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 100 ~la~~~g---~~~~~v~v~~sgs~a~~~~l~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++.+.+| ++++++++|+|+++++..++..+ +++||.|+++++.|..+.. .+...|+++..+ +
T Consensus 74 ~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~--~---- 139 (364)
T PRK07865 74 WLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV--------GARLAGATVVRA--D---- 139 (364)
T ss_pred HHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH--------HHHhcCCEEEec--C----
Confidence 9888876 45778888999999988777777 7999999999966654432 344556555333 1
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC-CC---CC--CCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-VI---PS--PFE 244 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~-~~---~~--~l~ 244 (356)
++++++. .++++|+++ ++| ||.+.+ +++|.++|+++|+++|+|+++..-..... .. .. +..
T Consensus 140 ----~~~~l~~----~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 211 (364)
T PRK07865 140 ----SLTELGP----QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGD 211 (364)
T ss_pred ----ChhhCCc----ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCc
Confidence 2233322 378999987 777 897765 56788889999999999999863211100 00 00 000
Q ss_pred -CccEEEeCCCCcCC--CCCceEEEEec
Q 018401 245 -YADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 245 -~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
.-.+++.|++|.++ |.+.|+++.++
T Consensus 212 ~~~~i~~~S~SK~~~~~GlRiG~i~~~~ 239 (364)
T PRK07865 212 HTGLLAVHSLSKQSNLAGYRAGFVAGDP 239 (364)
T ss_pred cceEEEEeechhccCCCceeeEEEecCH
Confidence 12489999999874 44459888765
No 212
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.69 E-value=4.9e-16 Score=159.01 Aligned_cols=175 Identities=14% Similarity=0.071 Sum_probs=131.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCcccc-CCCchHHHHHHHHhhc--------CCCCeeeecCCCCCcccCcccccccccc
Q 018401 88 EYIDMAESLCQKRALEAFRLDPEKWGG-SLSGSPSNFQVYTALL--------KPHDRIMALDLPHGGHLSHGYQTDTKKI 158 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~v~v-~~sgs~a~~~~l~al~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~~~ 158 (356)
++..++..++.+|+++++|.+. ..+ +++|+.+..+.++++- ...++|+++...|+++.. . +
T Consensus 526 qG~lq~i~elq~~l~eltGmd~--~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa--s------a 595 (939)
T TIGR00461 526 EGYQELIAQLEKWLCSITGFDA--ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA--S------A 595 (939)
T ss_pred HHHHHHHHHHHHHHHHHHCCCC--cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH--H------H
Confidence 4456677788899999999984 345 7888876664444442 234679999999987743 2 3
Q ss_pred cccceeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCCCCCccc-HHHHHHHHHHcCCEEEEeccchhhhc
Q 018401 159 SAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASAYARLYD-YERIRKVCNKQKAIMLADMAHISGLV 234 (356)
Q Consensus 159 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~--~~~k~v~l~-~~n~g~~~~-l~~I~~la~~~g~~vivD~a~~~g~~ 234 (356)
...|.+++.+ +.+ +++.+|+++|++++++ .++++|+++ ++++|...+ +++|+++||++|.++++|+||..+..
T Consensus 596 ~~~G~~Vv~V--~~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~ 672 (939)
T TIGR00461 596 AMAGMQVVPV--NCD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQV 672 (939)
T ss_pred HHCCCEEEEe--ccC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCC
Confidence 3557667666 455 5689999999999974 378899888 777897776 99999999999999999999976554
Q ss_pred ccC-CCCCCCCCccEEEeCCCCcCC-----CCCc-eEEEEecCcchhccCC
Q 018401 235 AAG-VIPSPFEYADVVTTTTHKSLR-----GPRG-AMIFFRKGVKEINKQG 278 (356)
Q Consensus 235 ~~~-~~~~~l~~~D~~~~s~~K~l~-----gp~g-G~l~~~~~~~~~~~~g 278 (356)
... .... ++|+++++.||+|+ ||+| |++.+++.+.+..+++
T Consensus 673 ~l~~Pg~~---GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~ 720 (939)
T TIGR00461 673 GLTSPGDL---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKH 720 (939)
T ss_pred CCCCcccc---CCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCC
Confidence 332 1233 49999999999997 6777 8999998665554443
No 213
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.69 E-value=9.8e-16 Score=132.78 Aligned_cols=207 Identities=15% Similarity=0.156 Sum_probs=151.2
Q ss_pred HcCCeeecCC--CCCcHHHHHHHHhhhhccCCCCCCCCccCC-Cch-h--HHHHHHHHHHHHHHHcCCCCCccccCCCch
Q 018401 46 WKGLELIPSE--NFTSVSVMQAVGSVMTNKYSEGYPGARYYG-GNE-Y--IDMAESLCQKRALEAFRLDPEKWGGSLSGS 119 (356)
Q Consensus 46 ~~~i~L~~~~--~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~-~~~-~--~~~l~~~~~~~la~~~g~~~~~v~v~~sgs 119 (356)
++.||+++-. ..++++.++++.+. .+||+--.+.. |.- . .+.+. ...+.+++++|++.. -+|.++-
T Consensus 15 r~~iNv~PiQrGGiLt~eArkal~E~-----gDGYSvCD~C~~Grldei~kPpI~-~F~~dlaeFlg~D~~--R~t~GAR 86 (382)
T COG1103 15 RGFINVNPIQRGGILTEEARKALLEW-----GDGYSVCDFCLEGRLDEITKPPIK-DFLEDLAEFLGMDEV--RVTAGAR 86 (382)
T ss_pred cCccccChhhccCcCCHHHHHHHHHh-----cCCcchhhhhccCccccccCCcHH-HHHHHHHHHhCCcee--eecccch
Confidence 4567775332 35789999988763 44555443331 110 0 11111 233669999999864 4688888
Q ss_pred HHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh---c---CC
Q 018401 120 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---F---RP 193 (356)
Q Consensus 120 ~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~---~---~~ 193 (356)
++-.+++.+++++||-|++....|.+.+- .++.+|..+..|| ....+++.++++...+.+.+ . .+
T Consensus 87 e~KfavMhal~~~gd~vV~D~~aHYttyv--------AAEragl~v~eVp-~tg~Pey~i~~e~y~~viee~~~~~g~~~ 157 (382)
T COG1103 87 EAKFAVMHALCKEGDWVVVDSLAHYTTYV--------AAERAGLNVAEVP-NTGYPEYKITPEGYAEVIEEVKDEGGDPP 157 (382)
T ss_pred hhHHHHHHHhccCCCEEEEcCcchHHHHH--------HHHhcCCeEEecC-CCCCCceEecHHHHHHHHHHHHhccCCCc
Confidence 99998999999999999999887765543 4556787787786 33334567888877766642 1 25
Q ss_pred cEEEEc--CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 194 KLIVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 194 k~v~l~--~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
.+.+++ ..++|.+.|.++++++|+++|++++..+|.+.|.+|......+ +||+++|+||++.+... |++..+.+
T Consensus 158 ~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g---~DFiVgSGHKsmAAs~PiGvl~~~eE 234 (382)
T COG1103 158 ALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIG---ADFIVGSGHKSMAASAPIGVLAMSEE 234 (382)
T ss_pred eEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccC---CCEEEecCccchhccCCeeEEeehhH
Confidence 666776 4458999999999999999999999999999999998887777 99999999999865444 89999886
Q ss_pred cc
Q 018401 271 VK 272 (356)
Q Consensus 271 ~~ 272 (356)
|.
T Consensus 235 ~a 236 (382)
T COG1103 235 WA 236 (382)
T ss_pred HH
Confidence 54
No 214
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.69 E-value=1.3e-15 Score=148.10 Aligned_cols=199 Identities=10% Similarity=0.025 Sum_probs=130.1
Q ss_pred CCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHH
Q 018401 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 48 ~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~ 125 (356)
.++|..+.+. ++|.+.+++.+..... ..|+...+..++++.+.+++.+.++ .+++|++++|+++++..+
T Consensus 87 ~i~L~~g~p~~~~~p~~~~~~~~~~~~~--------~~Y~~~~g~~~lr~~ia~~~~~~~~-~~~~Iiit~G~~~al~~~ 157 (431)
T PRK15481 87 LHDLAGGNPDPQRLPDLSRYFARLSRTP--------RLYGDAPVSPELHAWAARWLRDDCP-VAFEIDLTSGAIDAIERL 157 (431)
T ss_pred hhhhhcCCCChhHhHHHHHHHHHhhhhh--------hhcCCcCCCHHHHHHHHHHHhhccC-CcCeEEEecCcHHHHHHH
Confidence 4666655432 2455666666544321 1223334445666555555544322 345777798999999989
Q ss_pred HHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc--CCC-
Q 018401 126 YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--ASA- 202 (356)
Q Consensus 126 l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~--~~n- 202 (356)
+.++++|||.|++.+|.|..+ ...+...|+++..+ +.+ ++ .+|+++|++++++ ++|+++++ ++|
T Consensus 158 ~~~l~~pgd~Vlv~~P~y~~~--------~~~~~~~g~~~~~v--~~~-~~-g~~~~~l~~~~~~-~~k~i~~~p~p~NP 224 (431)
T PRK15481 158 LCAHLLPGDSVAVEDPCFLSS--------INMLRYAGFSASPV--SVD-AE-GMQPEKLERALAQ-GARAVILTPRAHNP 224 (431)
T ss_pred HHHhCCCCCEEEEeCCCcHHH--------HHHHHHcCCeEEee--ccC-CC-CCCHHHHHHHHhc-CCCEEEECCCCCCC
Confidence 999999999999999555433 33555677767555 454 22 4899999999876 78988875 677
Q ss_pred CCCcccHH---HHHHHHHHc-CCEEEEeccchhhhcccCCCCCCCC-CccEEEeCCCCcCCCCCc--eEEEEec
Q 018401 203 YARLYDYE---RIRKVCNKQ-KAIMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSLRGPRG--AMIFFRK 269 (356)
Q Consensus 203 ~g~~~~l~---~I~~la~~~-g~~vivD~a~~~g~~~~~~~~~~l~-~~D~~~~s~~K~l~gp~g--G~l~~~~ 269 (356)
||.+.+.+ +|.++|+++ +++||+|+++..-.........+.. .--+++.|++|.++ |.- |+++.++
T Consensus 225 TG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~~ 297 (431)
T PRK15481 225 TGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDLRLAFVASDS 297 (431)
T ss_pred CCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCceeEEEeCCH
Confidence 89888865 889999999 9999999987522111000111111 13488999999886 422 9888766
No 215
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=2.8e-16 Score=148.56 Aligned_cols=187 Identities=16% Similarity=0.141 Sum_probs=129.9
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYT 127 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~ 127 (356)
.++|+.++|+.++... +.. .. ...||..+ ..++++++++++|+++++|++++|+++++..++.
T Consensus 30 ~~~l~~Nenp~~~~~~--~~~--~~--~~~Yp~~~-----------~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~ 92 (351)
T PRK01688 30 DVWLNANEYPTAVEFQ--LTQ--QT--LNRYPECQ-----------PKAVIENYAAYAGVKPEQVLVSRGADEGIELLIR 92 (351)
T ss_pred ceEecCCCCCCCCChh--hcc--cc--cccCCCCC-----------hHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHH
Confidence 4899999998543321 111 11 11344331 1356689999999999998889999999998999
Q ss_pred hhcCCC-CeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 128 ALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 128 al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
+++++| |.|+++.++| ..+...++..|++++.+ +.+ +++.+|++++++++ + ++++|+++ |+| ||
T Consensus 93 ~~~~~g~~~vli~~P~y--------~~y~~~~~~~G~~~~~v--~~~-~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG 159 (351)
T PRK01688 93 AFCEPGKDAILYCPPTY--------GMYSVSAETIGVEIRTV--PTL-DNWQLDLPAIADNL-D-GVKVVYVCSPNNPTG 159 (351)
T ss_pred HhcCCCCCEEEEcCCCH--------HHHHHHHHHcCCEEEEe--ecC-CCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCC
Confidence 999997 8999998555 33343455677777666 444 45789999999887 4 79999988 888 99
Q ss_pred CcccHHHHHHHHHHc--CCEEEEeccchhhhccc-C----CCCCCCCCccEEEeCCCCcCCCCCc---eEEEEec
Q 018401 205 RLYDYERIRKVCNKQ--KAIMLADMAHISGLVAA-G----VIPSPFEYADVVTTTTHKSLRGPRG---AMIFFRK 269 (356)
Q Consensus 205 ~~~~l~~I~~la~~~--g~~vivD~a~~~g~~~~-~----~~~~~l~~~D~~~~s~~K~l~gp~g---G~l~~~~ 269 (356)
...+.++|.++++.. +++||+|+++.- ..+. . +...+ --+++.|++|++ |..| |+++.++
T Consensus 160 ~~~~~~~l~~l~~~~~~~~~vivDEay~~-f~~~~s~~~~~~~~~---n~iv~rSfSK~~-glaGlRiGy~i~~~ 229 (351)
T PRK01688 160 NLINPQDLRTLLELTRGKAIVVADEAYIE-FCPQASLAGWLAEYP---HLVILRTLSKAF-ALAGLRCGFTLANE 229 (351)
T ss_pred CCCCHHHHHHHHHhCCCCcEEEEECchhh-cCCCCChHHHHhhCC---CEEEEecchHhh-cCHHHHHhHHhCCH
Confidence 999888777776542 689999999732 1110 0 00111 348899999976 4444 8888876
No 216
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=3.5e-16 Score=148.88 Aligned_cols=155 Identities=15% Similarity=0.147 Sum_probs=113.8
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
..+++.++++.|++.. +++++|++++..+ ..+++|||+|+++++.|++.+..+. ..+...|++++.+ +.
T Consensus 53 ~~Le~~lA~l~g~~~~--~~~~sG~aai~~~-~~~l~~Gd~Viv~~~~y~~~~~~~~----~~~~~~G~~v~~v--~~-- 121 (377)
T PRK07671 53 AALEELIAVLEGGHAG--FAFGSGMAAITAV-MMLFSSGDHVILTDDVYGGTYRVMT----KVLNRFGIEHTFV--DT-- 121 (377)
T ss_pred HHHHHHHHHHhCCCce--EEeCCHHHHHHHH-HHHhCCCCEEEECCCccchHHHHHH----HHHhcCCeEEEEE--CC--
Confidence 3455899999998764 4577888777744 4678999999999987765432211 1112245445434 22
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
.|++++++++++ ++++|+++ |+| +|.+.|+++|.++|+++|+++++|++++.+..... ... ++|++++|
T Consensus 122 ----~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p-~~~---g~Divv~S 192 (377)
T PRK07671 122 ----SNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQSP-ISL---GADIVLHS 192 (377)
T ss_pred ----CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCCh-hhh---CCeEEEec
Confidence 388999999987 89999997 777 89999999999999999999999999865433211 112 48999999
Q ss_pred CCCcCCCCC---ceEEEEec
Q 018401 253 THKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 253 ~~K~l~gp~---gG~l~~~~ 269 (356)
++|+++||. +|++++++
T Consensus 193 ~sK~l~G~~~~~~G~~v~~~ 212 (377)
T PRK07671 193 ATKYLGGHSDVVAGLVVVNS 212 (377)
T ss_pred CcccccCCccceeEEEEeCc
Confidence 999999885 37777765
No 217
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=7.3e-16 Score=146.87 Aligned_cols=197 Identities=16% Similarity=0.147 Sum_probs=136.0
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.|+|..++++ +++.+.+++.+..... ..|+.. .+ . .+|+.+++++|++++++++++|+++++..
T Consensus 37 ~~i~l~~~~~~~~~~~~~~~al~~~~~~~--~~Y~~~------~g-~----~lr~~ia~~~~~~~~~i~~t~G~~~~l~~ 103 (371)
T PRK05166 37 RIAKLGSNENPLGPSPAVRRAFADIAELL--RLYPDP------QG-R----ALREAIAARTGVPADRIILGNGSEDLIAV 103 (371)
T ss_pred ceEEcCCCCCCCCCCHHHHHHHHHHHHHh--hcCCCC------cH-H----HHHHHHHHHhCcCHHHEEEcCCHHHHHHH
Confidence 56889888775 6788888887654331 133322 22 2 35578888899988888889888899888
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n- 202 (356)
++.+++++||.|++..++|..+ ...+...|.+++.+ +.+ +++.+|++++++++.+ ++++++++ ++|
T Consensus 104 ~~~~~~~~gd~vli~~P~y~~~--------~~~~~~~g~~~~~v--~~~-~~~~~~~~~l~~~~~~-~~~~v~l~~p~NP 171 (371)
T PRK05166 104 ICRAVLRPGDRVVTLYPSFPLH--------EDYPTMMGARVERV--TVT-PDLGFDLDALCAAVAR-APRMLMFSNPSNP 171 (371)
T ss_pred HHHHhcCCCCEEEEcCCChHHH--------HHHHHHcCCeEEEe--ecC-CCCCCCHHHHHHhhhc-CCCEEEEeCCCCC
Confidence 8888999999999998665433 22344567666555 454 3468899999998876 88999887 888
Q ss_pred CCCcccHHHHHHHHHH--cCCEEEEeccchhhhcccCCCCCC---CC---CccEEEeCCCCcCC--CCCceEEEEec
Q 018401 203 YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSP---FE---YADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~--~g~~vivD~a~~~g~~~~~~~~~~---l~---~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
||.+.+.+++.++++. .++++|+|+++..-. ..+..... +. .--+++.|.+|.++ |.+-|++++.+
T Consensus 172 tG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~ 247 (371)
T PRK05166 172 VGSWLTADQLARVLDATPPETLIVVDEAYAEYA-AGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD 247 (371)
T ss_pred CCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhc-CCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC
Confidence 9999988777777654 478999999975222 11100000 00 12378899999763 34449887754
No 218
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.68 E-value=4e-16 Score=148.30 Aligned_cols=156 Identities=12% Similarity=0.020 Sum_probs=112.8
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
+.+++.++.+.+.+.. ++++||++|+..++.++++|||+|+++++.|+++..... ......|+.+..+ +.+
T Consensus 67 ~~Le~~la~le~~~~~--v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~----~~l~~~Gi~v~~v--d~~- 137 (395)
T PRK05967 67 DALCKAIDALEGSAGT--ILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCD----TMLKRLGVEVEYY--DPE- 137 (395)
T ss_pred HHHHHHHHHHhCCCCE--EEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHH----HHHHhcCeEEEEe--CCC-
Confidence 3445788877775543 457778999998999999999999999977765532111 1223346555444 221
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
+.+.+++++++ +||+|+++ ++| ++.+.|+++|+++|+++|+++++|++++.+.. .....+ |+|+++.|
T Consensus 138 -----~~e~l~~al~~-~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~-~~pl~~---GaDivv~S 207 (395)
T PRK05967 138 -----IGAGIAKLMRP-NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLY-FRPLDF---GVDISIHA 207 (395)
T ss_pred -----CHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCcee-cChhHc---CCCEEEEe
Confidence 35779999987 89999998 777 78999999999999999999999999865422 222223 49999999
Q ss_pred CCCcCCCCCc---eEEEEec
Q 018401 253 THKSLRGPRG---AMIFFRK 269 (356)
Q Consensus 253 ~~K~l~gp~g---G~l~~~~ 269 (356)
.+|+++|..+ |++..++
T Consensus 208 ~tKy~~Gh~d~~~G~v~~~~ 227 (395)
T PRK05967 208 ATKYPSGHSDILLGTVSANE 227 (395)
T ss_pred cccccCCCCCeeEEEEEcCH
Confidence 9999877543 6555444
No 219
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.68 E-value=5.3e-16 Score=149.66 Aligned_cols=155 Identities=13% Similarity=0.101 Sum_probs=114.6
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.+++.++++.|.+.. ++++||++++..++.+++++||+|+++.+.|++...... ..+...|+.+..+ +
T Consensus 62 ~Le~~lA~l~g~~~~--l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~----~~l~~~gi~v~~~--d---- 129 (425)
T PRK06084 62 VLEQRVAALEGGVGA--LAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLA----HTLPRIGIETRFA--A---- 129 (425)
T ss_pred HHHHHHHHHhCCCce--eEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHH----HhcccceeEEEEE--C----
Confidence 345889999987543 458899999998999999999999999877765432211 1112234333222 2
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
..|++++++++++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+..... ... ++|+++.|+
T Consensus 130 --~~d~e~le~ai~~-~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p-~~~---gaDivv~S~ 202 (425)
T PRK06084 130 --HDDIAALEALIDE-RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCRP-FEH---GADIVVHSL 202 (425)
T ss_pred --CCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCh-hhc---CCCEEEECc
Confidence 2389999999987 89999997 777 89999999999999999999999999986654211 122 499999999
Q ss_pred CCcCCCCCc---eEEEEec
Q 018401 254 HKSLRGPRG---AMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp~g---G~l~~~~ 269 (356)
+|+++|+.. |+++.+.
T Consensus 203 tK~l~G~g~~~gG~v~~~~ 221 (425)
T PRK06084 203 TKYIGGHGTSIGGIVVDSG 221 (425)
T ss_pred hhcccccccceeEEEEeCC
Confidence 999987654 5555433
No 220
>PLN02590 probable tyrosine decarboxylase
Probab=99.68 E-value=2.3e-15 Score=147.86 Aligned_cols=173 Identities=14% Similarity=0.066 Sum_probs=122.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCC-------ccccCCCchHHHHHHHHhhcC-----------CCCeeeecCCCCCcccCc
Q 018401 88 EYIDMAESLCQKRALEAFRLDPE-------KWGGSLSGSPSNFQVYTALLK-----------PHDRIMALDLPHGGHLSH 149 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~-------~v~v~~sgs~a~~~~l~al~~-----------~gd~Vl~~~~~~~~~~~~ 149 (356)
+...++|+.+.+|+++++|.+.. .-+|++|||++|..++.+.-. |.-.|++++..|.++..
T Consensus 166 Pa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~K- 244 (539)
T PLN02590 166 PAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRK- 244 (539)
T ss_pred chhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHH-
Confidence 44678999999999999999652 234588999888866654311 12234456666765533
Q ss_pred ccccccccccccce---eeEEEecccCC-CCCCCCHHHHHHHhhhc-----CCcEEEEc--CCCCCCcccHHHHHHHHHH
Q 018401 150 GYQTDTKKISAVSI---FFETMPYRLNE-STGYIDYDQLEKSATLF-----RPKLIVAG--ASAYARLYDYERIRKVCNK 218 (356)
Q Consensus 150 ~~~~~~~~~~~~g~---~~~~v~~~~~~-~~~~~d~~~l~~~i~~~-----~~k~v~l~--~~n~g~~~~l~~I~~la~~ 218 (356)
.+.+.|. .++.|| .+. +++.+|++.|++++.+. .+-+|+.+ .+++|.+.|+++|+++|++
T Consensus 245 -------Aa~ilGlg~~~vr~Vp--~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~ 315 (539)
T PLN02590 245 -------ACLIGGIHEENIRLLK--TDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKK 315 (539)
T ss_pred -------HHHHcCCCcccEEEEe--CCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHH
Confidence 4445555 255564 442 35689999999999642 13344444 4458999999999999999
Q ss_pred cCCEEEEeccchhhhcccCC---CCCCCCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 219 QKAIMLADMAHISGLVAAGV---IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 219 ~g~~vivD~a~~~g~~~~~~---~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
||+|++||+|++.......- ...+++.+|.+++++|||++.|.+ |++++++.
T Consensus 316 ~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~ 371 (539)
T PLN02590 316 YGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDR 371 (539)
T ss_pred hCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCH
Confidence 99999999998655433221 113455799999999999999999 99999874
No 221
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.68 E-value=4.4e-16 Score=150.32 Aligned_cols=155 Identities=16% Similarity=0.132 Sum_probs=115.9
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++++.+++++|.+. .++++||++++..++.+++++||+|+++++.|++....+. ..+...|++++.+ +.+
T Consensus 61 ~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~G~~v~~v--~~~-- 130 (418)
T TIGR01326 61 VLEQRIAALEGGVA--ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFK----HTLKRLGIEVRFV--DPD-- 130 (418)
T ss_pred HHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHH----HHHHHcCcEEEEE--CCC--
Confidence 45589999999753 3568999999998998999999999999877765433211 1223346555444 321
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
|++++++++++ ++++|+++ ++| +|.+.|+++|+++|+++|+++|+|++++.+..... ... ++|+++.|+
T Consensus 131 ----d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~~~-l~~---g~Divv~S~ 201 (418)
T TIGR01326 131 ----DPEEFEKAIDE-NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLCRP-IDH---GADIVVHSA 201 (418)
T ss_pred ----CHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcCCc-hhc---CCeEEEECc
Confidence 78999999987 89999987 777 78999999999999999999999999976632211 112 489999999
Q ss_pred CCcCCCCCc--eEEEEec
Q 018401 254 HKSLRGPRG--AMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp~g--G~l~~~~ 269 (356)
+|+++|+.. |.++++.
T Consensus 202 sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 202 TKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred cccccCCccceEEEEEec
Confidence 999976543 5555543
No 222
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.67 E-value=4.6e-16 Score=147.78 Aligned_cols=154 Identities=16% Similarity=0.172 Sum_probs=113.9
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.+++.++++.|++.. ++++||++++..+ .+++++||+|+++++.|++..... .......|++++.+ +.
T Consensus 56 ~le~~la~l~g~~~~--~~~~sG~~ai~~~-~~ll~~Gd~Vl~~~~~y~~t~~~~----~~~~~~~G~~v~~v--d~--- 123 (366)
T PRK08247 56 VLEQAIADLEGGDQG--FACSSGMAAIQLV-MSLFRSGDELIVSSDLYGGTYRLF----EEHWKKWNVRFVYV--NT--- 123 (366)
T ss_pred HHHHHHHHHhCCCcE--EEEcCHHHHHHHH-HHHhCCCCEEEEecCCcCcHHHHH----HHHhhccCceEEEE--CC---
Confidence 445899999999765 4588888888855 467899999999998776543211 11222345555444 22
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
.|++++++++++ ++++|+++ |+| ++...++++|+++|+++|+++|+|++++.+.....+ .. ++|+++.|+
T Consensus 124 ---~d~~~l~~~i~~-~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~-~~---g~di~i~S~ 195 (366)
T PRK08247 124 ---ASLKAIEQAITP-NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPL-EE---GADIVIHSA 195 (366)
T ss_pred ---CCHHHHHHhccc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCch-hc---CCcEEEeec
Confidence 388999999987 89999997 777 788899999999999999999999998654332111 12 489999999
Q ss_pred CCcCCCCC---ceEEEEec
Q 018401 254 HKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 254 ~K~l~gp~---gG~l~~~~ 269 (356)
+|+++|+. +|+++.++
T Consensus 196 sK~~~g~~d~~~G~iv~~~ 214 (366)
T PRK08247 196 TKYLGGHNDVLAGLVVAKG 214 (366)
T ss_pred ceeccCCCceeeeEEecCh
Confidence 99998863 47777654
No 223
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.67 E-value=1.8e-15 Score=143.90 Aligned_cols=207 Identities=14% Similarity=0.172 Sum_probs=135.0
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccccccccee
Q 018401 85 GGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 164 (356)
Q Consensus 85 ~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 164 (356)
++......++ +.+++++|.+.. +.+++|+.++.+++...++|||.| +..+|-.... ..+...|+.
T Consensus 75 agd~s~~~LE----~~vAe~lG~e~a--V~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~-------ahI~~~Ga~ 139 (460)
T PRK13237 75 AGSRNFYHLE----ETVQEYYGFKHV--VPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTR-------YHQELNGGI 139 (460)
T ss_pred cCCCcHHHHH----HHHHHHHCCCeE--EEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhH-------HHHHhCCcE
Confidence 4445566676 788889998863 458999988886655558999975 3322221111 113344543
Q ss_pred eEEEecc-------cCCCCCCCCHHHHHHHhhhc---CCcEEEEc-CCC-C-CCcc---cHHHHHHHHHHcCCEEEEecc
Q 018401 165 FETMPYR-------LNESTGYIDYDQLEKSATLF---RPKLIVAG-ASA-Y-ARLY---DYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 165 ~~~v~~~-------~~~~~~~~d~~~l~~~i~~~---~~k~v~l~-~~n-~-g~~~---~l~~I~~la~~~g~~vivD~a 228 (356)
+..+..+ .++.++.+|+++|++++++. ++++|.+. ++| . |... ++++|.++|++||+.||.|+|
T Consensus 140 fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaA 219 (460)
T PRK13237 140 FVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDAT 219 (460)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECc
Confidence 3222100 12345789999999999752 23344443 555 4 5544 689999999999999999999
Q ss_pred chhhhcc-c-----CCCCCC--------CCCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHhhccc--
Q 018401 229 HISGLVA-A-----GVIPSP--------FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQA-- 292 (356)
Q Consensus 229 ~~~g~~~-~-----~~~~~~--------l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~-- 292 (356)
|++|... + +....+ +..+|.+++|+||.+.++.||+++++++ ++.++++..
T Consensus 220 ra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~-------------eL~~~~r~~~~ 286 (460)
T PRK13237 220 RCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDE-------------ELFDEAKELVV 286 (460)
T ss_pred chhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCH-------------HHHHHHHHhcc
Confidence 9988431 1 111111 2258999999999999999999999986 677766654
Q ss_pred cCCCC--CCCCcHHHHHHHHHHHHHHhcc
Q 018401 293 VFPGL--QGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 293 ~~~~~--~gt~~~~~~~al~~Al~~~~~~ 319 (356)
.+++. .|....--+.|++.++++..+.
T Consensus 287 ~~eG~~tygg~~grd~~alAvgl~E~~~~ 315 (460)
T PRK13237 287 VYEGMPSYGGMAGRDMEAMAIGIEESVQY 315 (460)
T ss_pred ccCCCcCCCChhhhHHHHHHhHHHhhchH
Confidence 23332 2444445677888888776653
No 224
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=6.4e-16 Score=148.42 Aligned_cols=152 Identities=13% Similarity=0.126 Sum_probs=115.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEE
Q 018401 88 EYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 167 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 167 (356)
+....++ +.++++.|.... +.++||++|+.+++.+++++||+|+++.+.|++...... ..+...|+++..
T Consensus 61 Ptv~~lE----~~la~leg~~~a--v~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~----~~l~~~Gi~v~~ 130 (432)
T PRK06702 61 PTLAAFE----QKLAELEGGVGA--VATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFG----VSLRKLGIDVTF 130 (432)
T ss_pred cHHHHHH----HHHHHHhCCCcE--EEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHH----HHHHHCCCEEEE
Confidence 3445555 888999998764 459999999998999999999999999987775543211 112334555544
Q ss_pred EecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC-
Q 018401 168 MPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE- 244 (356)
Q Consensus 168 v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~- 244 (356)
+ + ..+|++++++++++ +||+|++. ++| ++.+.|+++|+++|+++|+++++|++.+.. ... .++.
T Consensus 131 v--d-----~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP---~~~--~pl~~ 197 (432)
T PRK06702 131 F--N-----PNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATP---YLC--QAFEH 197 (432)
T ss_pred E--C-----CCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCch---hhC--Chhhc
Confidence 4 2 23689999999987 89999987 777 788999999999999999999999996432 211 2232
Q ss_pred CccEEEeCCCCcCCCCCc
Q 018401 245 YADVVTTTTHKSLRGPRG 262 (356)
Q Consensus 245 ~~D~~~~s~~K~l~gp~g 262 (356)
|+|+++.|.+|+++|..+
T Consensus 198 GADIvv~S~TKy~~Ghsd 215 (432)
T PRK06702 198 GANIIVHSTTKYIDGHAS 215 (432)
T ss_pred CCCEEEEccccccCCCcc
Confidence 599999999999988766
No 225
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.67 E-value=3.8e-15 Score=143.20 Aligned_cols=224 Identities=13% Similarity=0.082 Sum_probs=141.0
Q ss_pred cccChHHHHHHHHHHHH--HHcCCeeecCC---C--CCc--HHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHH
Q 018401 28 EVVDPEIADIIEHEKAR--QWKGLELIPSE---N--FTS--VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (356)
Q Consensus 28 ~~~~~~~~~~~~~~~~~--~~~~i~L~~~~---~--~~~--~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (356)
..++++.+..+....+. ..+.|+|..+. + .+| +.+.+++.+.+..... ..|+...+..++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~------~~Y~~~~G~~~lR~aia 79 (396)
T PRK09257 6 EAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETT------KNYLPIEGLAAYRQAVQ 79 (396)
T ss_pred CCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccC------CCcCCCCCCHHHHHHHH
Confidence 34444444444433332 23578887663 1 223 6778887776543211 12444566788988888
Q ss_pred HHHHHHcCC--CCCcc--ccCCCchHHHHHHHHhh--cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEeccc
Q 018401 99 KRALEAFRL--DPEKW--GGSLSGSPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 172 (356)
Q Consensus 99 ~~la~~~g~--~~~~v--~v~~sgs~a~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 172 (356)
+++.+..+. +++++ ++|+|+++++..+++++ ++|||+|++++|.|. .+...+...|.+++.+++.
T Consensus 80 ~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~--------~~~~~~~~~g~~~v~v~~~- 150 (396)
T PRK09257 80 ELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWP--------NHRAIFEAAGLEVKTYPYY- 150 (396)
T ss_pred HHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcc--------cHHHHHHHcCCcEEEEecc-
Confidence 888766543 67776 66999999988787655 589999999995554 3333556678777666431
Q ss_pred CCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc-C--CCC--
Q 018401 173 NESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA-G--VIP-- 240 (356)
Q Consensus 173 ~~~~~~~d~~~l~~~i~~~--~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~-~--~~~-- 240 (356)
+.+++.+|++.+++++... ++++++++ ++| ||.+.+ +++|+++|++|++++|+|++..- .... + ...
T Consensus 151 ~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~-l~~~~~~~~~~~~ 229 (396)
T PRK09257 151 DAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQG-FGDGLEEDAYGLR 229 (396)
T ss_pred ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccc-cccchHHHHHHHH
Confidence 2234689999999988632 23445545 778 896665 66788889999999999998632 1110 0 000
Q ss_pred --CCCCCccEEEeCCCCcCC--CCCceEEEE
Q 018401 241 --SPFEYADVVTTTTHKSLR--GPRGAMIFF 267 (356)
Q Consensus 241 --~~l~~~D~~~~s~~K~l~--gp~gG~l~~ 267 (356)
.+...--+++.|++|.++ |-+-|++++
T Consensus 230 ~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~ 260 (396)
T PRK09257 230 AFAAAGLELLVASSFSKNFGLYGERVGALSV 260 (396)
T ss_pred HHHhcCCcEEEEEEcCCcCccccccceeEEE
Confidence 000012378899999774 333398874
No 226
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=2.3e-15 Score=141.56 Aligned_cols=195 Identities=15% Similarity=0.043 Sum_probs=133.1
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.++|..++++ +|+.+++++.+.+......+|+. .+... +|+++++++|++++++++++|+++++..
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-------~g~~~----lr~~ia~~~~~~~~~I~~t~G~~~~l~~ 87 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPH-------ITSDP----LREAIAEFYGLDAENIAVGNGSDELISY 87 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCC-------CCHHH----HHHHHHHHhCcCcceEEEcCCHHHHHHH
Confidence 45788877775 57889999988775321112321 23334 4578888889999988889899988876
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n- 202 (356)
++..+ +||+|+++.+.|..+ ...+...|..++.+ +.+ +++.+|++.+++.+ + ++++++++ |+|
T Consensus 88 ~~~~~--~gd~V~v~~P~y~~~--------~~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~~-~-~~~~v~~~~P~NP 152 (337)
T PRK03967 88 LVKLF--EGKHIVITPPTFGMY--------SFYAKLNGIPVIDV--PLK-EDFTIDGERIAEKA-K-NASAVFICSPNNP 152 (337)
T ss_pred HHHHh--CCCeEEEeCCChHHH--------HHHHHHcCCeEEEe--ecC-CCCCcCHHHHHHhc-c-CCCEEEEeCCCCC
Confidence 66655 799999999666422 22334566666555 454 34688999998865 3 68888887 888
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCC-CCCCCccEEEeCCCCcCC--CCCceEEEEec
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFEYADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~-~~l~~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
||.+.+.++|.++++ +++++|+|+++.- ........ .....--+++.|++|.++ |.+.|+++.++
T Consensus 153 tG~~~~~~~l~~i~~-~~~~ii~De~y~~-~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~ 220 (337)
T PRK03967 153 TGNLQPEEEILKVLE-TGKPVVLDEAYAE-FSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANE 220 (337)
T ss_pred CCCCCCHHHHHHHHh-cCCEEEEECchhh-hcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCH
Confidence 999999999999995 7999999999752 11100000 000012378899999874 33449999876
No 227
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.67 E-value=1.9e-15 Score=157.07 Aligned_cols=208 Identities=13% Similarity=0.054 Sum_probs=138.5
Q ss_pred CeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCC---chhHHHHHHHHHHHHHHHcCCCCCcccc-CCCchHHHHH
Q 018401 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG---NEYIDMAESLCQKRALEAFRLDPEKWGG-SLSGSPSNFQ 124 (356)
Q Consensus 49 i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~la~~~g~~~~~v~v-~~sgs~a~~~ 124 (356)
|.|.+....++|.+.+.+... ..|. .|. . |.+ .++..++..++.+++++++|.+. +.+ +++|+.++.+
T Consensus 502 i~lGsct~~~~p~~~~~~~~~--~~f~-~~h--P-~qp~e~~qG~l~~i~e~q~~l~eltG~d~--~sl~~~~ga~ge~a 573 (954)
T PRK05367 502 IPLGSCTMKLNAAAEMIPITW--PEFA-NLH--P-FAPAEQAAGYRELIDQLEAWLAEITGYDA--VSLQPNAGAQGEYA 573 (954)
T ss_pred eeCCcCCCcCCHHHHHHHHhC--cccc-ccC--C-CChHHHHHHHHHHHHHHHHHHHHHHCCCC--EEECccHHHHHHHH
Confidence 456565556666666655432 1121 111 1 111 23455677788899999999873 456 6677766644
Q ss_pred HHHhh----cCCCC----eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc--CCc
Q 018401 125 VYTAL----LKPHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPK 194 (356)
Q Consensus 125 ~l~al----~~~gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k 194 (356)
.+.++ .++|| +|++++..|+++... +...|.+++.+ +.+ .++.+|+++|++++.++ ++.
T Consensus 574 gL~a~r~~~~~~G~~~r~~vlis~~aH~snp~s--------a~~~G~~vv~v--~~d-~~G~iD~~~L~~~i~~~~~~la 642 (954)
T PRK05367 574 GLLAIRAYHESRGEGHRDVCLIPSSAHGTNPAS--------AVMAGMKVVVV--ACD-ENGNIDLDDLRAKAEEHADNLA 642 (954)
T ss_pred HHHHHHHHhhccCCCCCCEEEEEchhhhhhHHH--------HHHCCCEEEEE--CCC-CCCCcCHHHHHHHHhccCCCeE
Confidence 44333 35666 599999999887542 34567777666 444 45789999999999763 355
Q ss_pred EEEEc-CCCCCC-cccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCC-----c-eEEE
Q 018401 195 LIVAG-ASAYAR-LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR-----G-AMIF 266 (356)
Q Consensus 195 ~v~l~-~~n~g~-~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~-----g-G~l~ 266 (356)
+|+++ +++.|. ..|+++|+++||++|+++++|+||..+.+..... +-.|+|++++++||||++|. | |+++
T Consensus 643 ~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~p--g~~GADi~~~s~HK~f~~P~G~GGPg~G~l~ 720 (954)
T PRK05367 643 AIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARP--GDIGADVSHLNLHKTFCIPHGGGGPGVGPIG 720 (954)
T ss_pred EEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCCh--hhcCCCEEEecCcccCCCCcCCCCCceEEEe
Confidence 66666 554665 4689999999999999999999998766554321 11259999999999986544 4 5888
Q ss_pred EecCcchhccC
Q 018401 267 FRKGVKEINKQ 277 (356)
Q Consensus 267 ~~~~~~~~~~~ 277 (356)
+++.+.+.+++
T Consensus 721 vr~~l~p~lpg 731 (954)
T PRK05367 721 VKAHLAPFLPG 731 (954)
T ss_pred ecccccccCCC
Confidence 88754444333
No 228
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.67 E-value=1.5e-15 Score=144.20 Aligned_cols=208 Identities=15% Similarity=0.187 Sum_probs=138.0
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccce
Q 018401 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 163 (356)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 163 (356)
|.+......++ +.+++++|.+. ++.++||+.|+..+....++|||.| ++++|-... ...+...|+
T Consensus 67 yag~~s~~~lE----~~va~~~G~~~--av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt-------~ahIe~~Ga 131 (450)
T TIGR02618 67 YAGSRNFYHLE----RTVRELYGFKY--VVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTT-------RYHQEKNGA 131 (450)
T ss_pred hcCCCcHHHHH----HHHHHHHCCCe--EEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHH-------HHHHHhCCe
Confidence 44555566776 78888999886 3558999988665666668999987 333332111 112345565
Q ss_pred eeEEEecc------c-CCCCCCCCHHHHHHHhhhc---CCcEEEEc-CCC-C-CCc---ccHHHHHHHHHHcCCEEEEec
Q 018401 164 FFETMPYR------L-NESTGYIDYDQLEKSATLF---RPKLIVAG-ASA-Y-ARL---YDYERIRKVCNKQKAIMLADM 227 (356)
Q Consensus 164 ~~~~v~~~------~-~~~~~~~d~~~l~~~i~~~---~~k~v~l~-~~n-~-g~~---~~l~~I~~la~~~g~~vivD~ 227 (356)
.+..++.+ . ++.++.+|+++|++++++. ++++|.+. ++| . |.+ .++++|.++|++||+.||.|+
T Consensus 132 v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~Da 211 (450)
T TIGR02618 132 TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDA 211 (450)
T ss_pred EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 44333211 0 1245789999999999752 23455554 666 3 566 457899999999999999999
Q ss_pred cchhhhccc------CCCCCC--------CCCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHhhccc-
Q 018401 228 AHISGLVAA------GVIPSP--------FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQA- 292 (356)
Q Consensus 228 a~~~g~~~~------~~~~~~--------l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~- 292 (356)
||.+|...+ +....+ +.++|.+++|++|..++|.||+++++++ ++.++.+..
T Consensus 212 AR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~-------------~l~~k~r~~~ 278 (450)
T TIGR02618 212 TRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDD-------------EMFQSAKELV 278 (450)
T ss_pred cchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCH-------------HHHHHHHHHh
Confidence 999864221 111112 2368999999999999999999998885 566655443
Q ss_pred -cCCCC--CCCCcHHHHHHHHHHHHHHhcc
Q 018401 293 -VFPGL--QGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 293 -~~~~~--~gt~~~~~~~al~~Al~~~~~~ 319 (356)
.+.+. .|......+.|+..+|++..+.
T Consensus 279 ~~~eG~~tyGgla~r~~~ala~gL~e~~~~ 308 (450)
T TIGR02618 279 VVFEGMPSYGGLAGRDMEAMAIGIREAVDY 308 (450)
T ss_pred hhcCCccccCchhhhhHHHHHHHHHHhhhH
Confidence 22222 2555556778888888887653
No 229
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.67 E-value=4.7e-15 Score=144.14 Aligned_cols=213 Identities=11% Similarity=0.068 Sum_probs=143.2
Q ss_pred cCCeeecCCCCC-cHHHHHHHHhhhhcc-C----CCCCCCCccCCCchhHHHHHHHHHHHHHHHcC----CCCCccccCC
Q 018401 47 KGLELIPSENFT-SVSVMQAVGSVMTNK-Y----SEGYPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGGSL 116 (356)
Q Consensus 47 ~~i~L~~~~~~~-~~~V~~a~~~~l~~~-~----~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g----~~~~~v~v~~ 116 (356)
..|+|.-.||.+ ...+.+.+.+..... + ........+|.+..+...+++++.+++.+.+| +++++|++|+
T Consensus 48 g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~ 127 (447)
T PLN02607 48 GVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTA 127 (447)
T ss_pred ceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcC
Confidence 468999999875 556666666543210 0 00111223456666778899889899988876 5778888899
Q ss_pred CchHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccccc-ccceeeEEEecccCC-CCCCCCHHHHHHHhhh----
Q 018401 117 SGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLNE-STGYIDYDQLEKSATL---- 190 (356)
Q Consensus 117 sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~---- 190 (356)
|+++++.+++.++++|||.|+++.|.|+++.. .+. ..|++++.| +.+. +++.+|++.+++++.+
T Consensus 128 G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~--------~~~~~~g~~vv~v--~~~~~~~f~~~~~~le~a~~~a~~~ 197 (447)
T PLN02607 128 GATAANELLTFILADPGDALLVPTPYYPGFDR--------DLRWRTGVKIVPI--HCDSSNNFQVTPQALEAAYQEAEAA 197 (447)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCCcEEEEE--eCCCCCCCcCCHHHHHHHHHHHHHh
Confidence 99999998888899999999999976655532 222 235555444 4442 3357899999998864
Q ss_pred -cCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc-CC---C----CCC---CCCccEEEeCC
Q 018401 191 -FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA-GV---I----PSP---FEYADVVTTTT 253 (356)
Q Consensus 191 -~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~-~~---~----~~~---l~~~D~~~~s~ 253 (356)
.++|+|+++ |+| +|.+.+ +++|.++|+++++.+|+|++++.-.... .. . ..+ ...--+++.|.
T Consensus 198 ~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~ 277 (447)
T PLN02607 198 NIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSL 277 (447)
T ss_pred CCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcc
Confidence 368888887 888 997776 6678889999999999999975322211 00 0 000 00112677899
Q ss_pred CCcCC--CCCceEEEEec
Q 018401 254 HKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 254 ~K~l~--gp~gG~l~~~~ 269 (356)
+|.|+ |-+-|+++...
T Consensus 278 SK~fg~~GlRvG~ivs~n 295 (447)
T PLN02607 278 SKDLGLPGFRVGTIYSYN 295 (447)
T ss_pred hhcCCCCcceEEEEEEcC
Confidence 99774 33339988743
No 230
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.67 E-value=3.4e-15 Score=135.12 Aligned_cols=207 Identities=17% Similarity=0.082 Sum_probs=141.2
Q ss_pred cCCeeecCCC------CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCc
Q 018401 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSG 118 (356)
Q Consensus 47 ~~i~L~~~~~------~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sg 118 (356)
..|.|..+++ .+++.+.+|+..++...-.++|..+ .+....++++.+.+-+-+.. ++++|++|+|.
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps------~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC 135 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPS------VGILPARRAVAEYLNRDLPNKLTADDVVLTSGC 135 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCc------cccHHHHHHHHHHhhcCCCCccCcCceEEeccc
Confidence 3567765444 3689999999999987544444433 44554444443333222222 56677779999
Q ss_pred hHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 018401 119 SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 198 (356)
Q Consensus 119 s~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l 198 (356)
++|+..++.++.+||..||++. |+|+.|...+...|+.++...+ +...++.+|++.+|.++++ +|.++++
T Consensus 136 ~qAIe~~i~~LA~p~aNILlPr--------PGfp~Y~~~a~~~~lEVR~ydl-LPe~~weIDL~~veal~DE-NT~Aivv 205 (447)
T KOG0259|consen 136 SQAIELAISSLANPGANILLPR--------PGFPLYDTRAIYSGLEVRYYDL-LPEKDWEIDLDGVEALADE-NTVAIVV 205 (447)
T ss_pred hHHHHHHHHHhcCCCCceecCC--------CCCchHHHhhhhcCceeEeecc-cCcccceechHHHHHhhcc-CeeEEEE
Confidence 9999999999999999999999 6666555555566766655533 2234679999999999988 7776666
Q ss_pred c-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC-----CccEEEeCCCCcCCCC--CceEEE
Q 018401 199 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-----YADVVTTTTHKSLRGP--RGAMIF 266 (356)
Q Consensus 199 ~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~-----~~D~~~~s~~K~l~gp--~gG~l~ 266 (356)
. |+| .|.++. +++|+++|+++|+++|.|+...-- +..+-...+++ -.-+.+++-+|-|.-| +-|.++
T Consensus 206 iNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~-vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~ 284 (447)
T KOG0259|consen 206 INPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHT-VFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIA 284 (447)
T ss_pred eCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhccee-ecCCCCccchhhccccCceEeecccccccccCCceeeeEE
Confidence 4 888 886664 889999999999999999985311 11121112222 1236677889966544 339999
Q ss_pred EecC
Q 018401 267 FRKG 270 (356)
Q Consensus 267 ~~~~ 270 (356)
+++.
T Consensus 285 ~hD~ 288 (447)
T KOG0259|consen 285 LHDP 288 (447)
T ss_pred Eecc
Confidence 9884
No 231
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.67 E-value=4.7e-16 Score=136.14 Aligned_cols=220 Identities=20% Similarity=0.249 Sum_probs=161.4
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeee
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMA 138 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~ 138 (356)
+|+|+++-.+++.+ |..|..+.++.-|++... +.+...+|++.+-+.. ++..++-.+|..++.+++.|.|.|+.
T Consensus 83 hPeii~a~~~alee-yGaGlssvrfIcGtq~iH---k~LE~kiAqfh~rED~--ilypscfdANag~feail~pedAvfS 156 (417)
T KOG1359|consen 83 HPEIINAGQKALEE-YGAGLSSVRFICGTQDIH---KLLESKIAQFHGREDT--ILYPSCFDANAGAFEAILTPEDAVFS 156 (417)
T ss_pred ChHHHHHHHHHHHH-hCCCccceeEEecchHHH---HHHHHHHHHHhCCCce--EEeccccccchHHHHHhcChhhhhhc
Confidence 79999999999987 777777777766665533 2334889999887665 55778889999899999999999999
Q ss_pred cCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhh---hcCCcEEEEc--CCCCCCcccHHHHH
Q 018401 139 LDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT---LFRPKLIVAG--ASAYARLYDYERIR 213 (356)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~---~~~~k~v~l~--~~n~g~~~~l~~I~ 213 (356)
....|.+.+. ++.+.. ....+|+-+++..+. +.+-|+|+.. .|..|.+.|+++|.
T Consensus 157 DeLNhASIId--------GirLck------------ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei~ 216 (417)
T KOG1359|consen 157 DELNHASIID--------GIRLCK------------RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEIS 216 (417)
T ss_pred cccccchhhh--------hhHHHh------------hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHHH
Confidence 9999988876 333332 112455666665443 2356677665 67789999999999
Q ss_pred HHHHHcCCEEEEeccchhhhcccC---CC-CCC-CCCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHh
Q 018401 214 KVCNKQKAIMLADMAHISGLVAAG---VI-PSP-FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEK 288 (356)
Q Consensus 214 ~la~~~g~~vivD~a~~~g~~~~~---~~-~~~-l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~ 288 (356)
+++++||+++++|++|+.|..... .. ..+ ++.+|++..+..|.++|-.||+....+ .+...
T Consensus 217 ~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~--------------~li~l 282 (417)
T KOG1359|consen 217 QLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPK--------------PLISL 282 (417)
T ss_pred HHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCCh--------------hHHHH
Confidence 999999999999999998765321 11 111 235899999999999999999999888 46666
Q ss_pred hccccCCCCCCCCcHHHHHHH-HHHHHHHhc
Q 018401 289 INQAVFPGLQGGPHNHTITGL-AVALKQVCT 318 (356)
Q Consensus 289 ~~~~~~~~~~gt~~~~~~~al-~~Al~~~~~ 318 (356)
++...+|..|++.-.+.+.++ ..|++.+..
T Consensus 283 lrqr~RpylFSnslppavV~~a~ka~dllm~ 313 (417)
T KOG1359|consen 283 LRQRSRPYLFSNSLPPAVVGMAAKAYDLLMV 313 (417)
T ss_pred HHhcCCceeecCCCChhhhhhhHHHHHHHHh
Confidence 776667788765544444433 356666654
No 232
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.66 E-value=3.5e-16 Score=156.40 Aligned_cols=208 Identities=20% Similarity=0.153 Sum_probs=143.0
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccc-ccccceeeEEEecccCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK-ISAVSIFFETMPYRLNE 174 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~~~~ 174 (356)
++.+..|+.||++.. +.+++|+|.+|.+++++++.+||.||+....|.|++. + +.+.|+..+.+.-..+
T Consensus 178 eAq~~AA~~fgAd~t-yFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~h--------gaLiLsGa~PVYl~P~~n- 247 (720)
T PRK13578 178 DAQKHAAKVFNADKT-YFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHH--------GALIQAGATPVYLETARN- 247 (720)
T ss_pred HHHHHHHHHhCCCce-EEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHHcCCeEEEeecccc-
Confidence 456889999999876 3348888899999999999999999999999988765 3 4567766655532222
Q ss_pred CC---CCCCH-----HHHHHHhhhc--------C-CcEEEEc-CCCCCCcccHHHHHHH-HHHcCCEEEEeccchhhhcc
Q 018401 175 ST---GYIDY-----DQLEKSATLF--------R-PKLIVAG-ASAYARLYDYERIRKV-CNKQKAIMLADMAHISGLVA 235 (356)
Q Consensus 175 ~~---~~~d~-----~~l~~~i~~~--------~-~k~v~l~-~~n~g~~~~l~~I~~l-a~~~g~~vivD~a~~~g~~~ 235 (356)
.. +.++. +.+++++.++ + .++++++ ++-.|.+.++++|+++ ++.++ ++++|+||.+....
T Consensus 248 ~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F 326 (720)
T PRK13578 248 PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQF 326 (720)
T ss_pred ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchhhhcc
Confidence 22 23454 4488888763 1 4788888 4448999999999998 68888 99999999755432
Q ss_pred cC----CCCCCCC-Ccc----EEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHH
Q 018401 236 AG----VIPSPFE-YAD----VVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHT 305 (356)
Q Consensus 236 ~~----~~~~~l~-~~D----~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~ 305 (356)
.. +....+. |+| +++.|+||.+.+... ++|.++++. ..|.....+ .++++....-....+|+++.
T Consensus 327 ~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~----i~g~~~~v~-~~r~~~al~m~qSTSPsY~L 401 (720)
T PRK13578 327 IPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNH----IKGQARYCP-HKRLNNAFMLHASTSPFYPL 401 (720)
T ss_pred CcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcc----cccccccCC-HHHHHHHHHHHcCCChHHHH
Confidence 22 2212222 688 999999999988777 677776531 001000001 12333332222347899999
Q ss_pred HHHHHHHHHHHhcc
Q 018401 306 ITGLAVALKQVCTL 319 (356)
Q Consensus 306 ~~al~~Al~~~~~~ 319 (356)
+++|..|..++..+
T Consensus 402 mASLDva~~~m~~~ 415 (720)
T PRK13578 402 FAALDVNAKMHEGE 415 (720)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999998888753
No 233
>PLN02672 methionine S-methyltransferase
Probab=99.66 E-value=4.3e-15 Score=154.36 Aligned_cols=203 Identities=9% Similarity=0.015 Sum_probs=138.0
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC---ccccCCCchHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE---KWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~---~v~v~~sgs~a 121 (356)
+.|+|..++++ +|+.+++++.+.+.... + + .+..++++++++++++.+|++.+ ++++++|++++
T Consensus 698 ~vI~LsinE~d~ppPp~V~eAi~eal~~~~---~-----s---~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~el 766 (1082)
T PLN02672 698 SLIHMDVDESFLPVPSAVKASIFESFVRQN---I-----S---ESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLAL 766 (1082)
T ss_pred CEEEEeCCCCCCCCCHHHHHHHHHHHhhcC---C-----C---CCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHH
Confidence 56899888885 68899999988775411 1 0 11234577888999999999543 55557777788
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
+..+++++++|||.|+++.| .|..+...+...|++++.+++..+ +++.+|++++++++++.+.++|+++ |
T Consensus 767 L~lll~aLl~pGD~VLVp~P--------tY~~Y~~~a~~~Ga~vv~Vpl~~e-~gf~lD~d~Le~al~~~~~~~I~L~nP 837 (1082)
T PLN02672 767 FNKLVLCCVQEGGTLCFPAG--------SNGTYVSAAKFLKANFRRIPTKSS-DGFKLTAKTLASTLETVKKPWVYISGP 837 (1082)
T ss_pred HHHHHHHHcCCCCEEEEeCC--------ChHHHHHHHHHcCCEEEEEecccc-cCCCCCHHHHHHHhccCCCCEEEEECc
Confidence 88888999999999999994 444444466677877766654221 3568999999999865234456555 7
Q ss_pred C-C-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCC-CCCC-------CCC-----ccEEEeCCCCcCCC--C
Q 018401 201 S-A-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSP-------FEY-----ADVVTTTTHKSLRG--P 260 (356)
Q Consensus 201 ~-n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~-~~~~-------l~~-----~D~~~~s~~K~l~g--p 260 (356)
+ | ||.+++ +++|.++|++||++||+|++++.-...... .... +.. .-+++.|.+|.++. .
T Consensus 838 nhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGL 917 (1082)
T PLN02672 838 TINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGH 917 (1082)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHH
Confidence 6 7 897765 667788899999999999998521111100 0000 000 12577799986643 3
Q ss_pred CceEEEEec
Q 018401 261 RGAMIFFRK 269 (356)
Q Consensus 261 ~gG~l~~~~ 269 (356)
+-|+++..+
T Consensus 918 RIGylIap~ 926 (1082)
T PLN02672 918 EFGFLALND 926 (1082)
T ss_pred HheeEEeCC
Confidence 339999865
No 234
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.66 E-value=1.2e-14 Score=140.03 Aligned_cols=224 Identities=12% Similarity=0.045 Sum_probs=136.2
Q ss_pred cccccCh-HHHHHHHHHHHHH------HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHH
Q 018401 26 PLEVVDP-EIADIIEHEKARQ------WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (356)
Q Consensus 26 ~~~~~~~-~~~~~~~~~~~~~------~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (356)
.+..+++ .+|..+....+.. .+.++|..++++ +++.+.+++.+.+.+... . .....|+...+...++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~-~-~~~~~Y~p~~g~~~lr~a 83 (402)
T TIGR03542 6 HFLKLKSSYLFSEINRRVNEFRKKHPSADIIRLGIGDTTQPLPASVIEAFHNAVDELAS-E-ETFRGYGPEQGYPFLREA 83 (402)
T ss_pred CccccCcchHHHHHHHHHHHHHhccCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccc-c-ccccCCCCCCCCHHHHHH
Confidence 3444443 3455554443332 246888877775 578899999887765210 0 011223333455667755
Q ss_pred HHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccce-----------ee
Q 018401 97 CQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI-----------FF 165 (356)
Q Consensus 97 ~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-----------~~ 165 (356)
+++++.+. ++++++|++++|+++++.. +..++.+||+|++++|+|..+.. .++..|. .+
T Consensus 84 ia~~~~~~-~~~~d~I~it~Ga~~al~~-l~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~~~~~~~~~~ 153 (402)
T TIGR03542 84 IAENDYRG-RIDPEEIFISDGAKCDVFR-LQSLFGSDNTVAVQDPVYPAYVD--------SNVMAGRAGVLDDDGRYSKI 153 (402)
T ss_pred HHHHHHhc-CCCHHHEEECCCcHHHHHH-HHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCccccccccccceE
Confidence 55543221 5788888889888888885 45667899999999976654432 3334454 44
Q ss_pred EEEecccCCC-CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCC
Q 018401 166 ETMPYRLNES-TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVI 239 (356)
Q Consensus 166 ~~v~~~~~~~-~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~ 239 (356)
..+ +.+.+ ++..|++. .+ ++++|+++ |+| ||.+.+ +++|.++|+++++++|+|+++.--.......
T Consensus 154 ~~v--~~~~~~~~~~~~~~-----~~-~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~ 225 (402)
T TIGR03542 154 TYL--PCTKENNFIPDLPE-----EP-KIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLP 225 (402)
T ss_pred EEe--ecchhhCCCCCccc-----cC-CceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCC
Confidence 444 44322 23444321 13 78999888 888 897777 7788888999999999999975321111100
Q ss_pred C--CCCC---CccEEEeCCCCcCCCC--CceEEEEec
Q 018401 240 P--SPFE---YADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 240 ~--~~l~---~~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
. ..+. ..-+++.|++|.++.| +-|+++.++
T Consensus 226 ~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~ 262 (402)
T TIGR03542 226 HSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPK 262 (402)
T ss_pred cchhhCCCCcccEEEEecCccccCCCCcceEEEEecH
Confidence 0 0111 1236689999977433 339999876
No 235
>PRK07908 hypothetical protein; Provisional
Probab=99.66 E-value=4.6e-15 Score=140.20 Aligned_cols=190 Identities=12% Similarity=0.097 Sum_probs=126.2
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.++|..++++ +|+.+++++.+.+... .+|+.. .+... +|+.+++++|+++++|++|+|+++++..
T Consensus 23 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~------~g~~~----lr~aia~~~~~~~~~I~it~Ga~~al~~ 90 (349)
T PRK07908 23 GLLDFAVNVRHDTPPEWLRERLAARLGDL--AAYPST------EDERR----ARAAVAARHGRTPDEVLLLAGAAEGFAL 90 (349)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHhhHh--hcCCCc------cchHH----HHHHHHHHhCcChhhEEECCCHHHHHHH
Confidence 57888888875 5888999999877542 134332 23334 4578888889999998889999999886
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n- 202 (356)
+++ +++|+ +++..+++ ..+...+...|.++..+ +.+ +++.+|++.+ .+ ++++++++ ++|
T Consensus 91 ~~~--l~~~~-viv~~P~y--------~~~~~~~~~~G~~i~~v--~~~-~~~~~d~~~l----~~-~~~~i~l~np~NP 151 (349)
T PRK07908 91 LAR--LRPRR-AAVVHPSF--------TEPEAALRAAGIPVHRV--VLD-PPFRLDPAAV----PD-DADLVVIGNPTNP 151 (349)
T ss_pred HHh--cCCCe-EEEeCCCC--------hHHHHHHHHcCCEEEee--ccC-cccCcChhHh----cc-CCCEEEEcCCCCC
Confidence 666 57754 55555333 22222445567666555 455 3367788754 34 78998887 888
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEeccchhhh--cccCCCCCCCCCccEEEeCCCCcCC--CCCceEEEEec
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMAHISGL--VAAGVIPSPFEYADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a~~~g~--~~~~~~~~~l~~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
||...+.++|.++|++ +.++|+|++++.-. ....+..... .-.+++.|++|.++ |.+-|+++.++
T Consensus 152 TG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~-~~~i~i~S~SK~~~l~GlRiG~~~~~~ 220 (349)
T PRK07908 152 TSVLHPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDL-PGVLVLRSLTKTWSLAGLRVGYALGAP 220 (349)
T ss_pred CCCCcCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccC-CCEEEEeecccccCCccceeeeeecCH
Confidence 9999999999999964 78899999985211 1111111110 12366679999663 44449999876
No 236
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.65 E-value=2.6e-15 Score=142.45 Aligned_cols=206 Identities=15% Similarity=0.146 Sum_probs=129.6
Q ss_pred CCeeecCCCCC------cHHHHHHHHh-hhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCC-ccccCCC
Q 018401 48 GLELIPSENFT------SVSVMQAVGS-VMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPE-KWGGSLS 117 (356)
Q Consensus 48 ~i~L~~~~~~~------~~~V~~a~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~-~v~v~~s 117 (356)
.|+|..+++.. ++.+++++.+ ........+| +...+...+++++.+++.+..|. +++ ++++++|
T Consensus 3 ~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y------~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G 76 (363)
T PF00155_consen 3 VINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGY------PPPQGYPELREAIADFLGRRYGVPVDPEANILVTSG 76 (363)
T ss_dssp EEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSS------TCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESH
T ss_pred EEEEECCCCCCcccccchHHHHHHHHHHhhcccccccC------CCchhhHHHHHHHHHHhhhccCcccccceEEEEecc
Confidence 46777666543 3556666554 2221111233 33356777776666666544444 555 5544655
Q ss_pred chHHHHHHHHhh-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc-----
Q 018401 118 GSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF----- 191 (356)
Q Consensus 118 gs~a~~~~l~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~----- 191 (356)
+.+++..++..+ .++||.|+++++.|..+. ..+...|..+..+++... +++.+|+++|++.+++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~--------~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~ 147 (363)
T PF00155_consen 77 AQAALFLLLRLLKINPGDTVLVPDPCYPSYI--------EAARLLGAEVIPVPLDSE-NDFHLDPEALEEALDELPSKGP 147 (363)
T ss_dssp HHHHHHHHHHHHHSSTTSEEEEEESSSTHHH--------HHHHHTTSEEEEEEEEET-TTTEETHHHHHHHHHTSHTTTE
T ss_pred cccchhhhhhcccccccccceecCCcccccc--------ccccccCceeeecccccc-cccccccccccccccccccccc
Confidence 557777666777 789999999996555443 345566777666654333 45789999999998763
Q ss_pred CCcEEEEc-CCC-CCCcccHHHH---HHHHHHcCCEEEEeccchhhhcccC-CC--CCCCC-Cc-cEEEeCCCCcCCCCC
Q 018401 192 RPKLIVAG-ASA-YARLYDYERI---RKVCNKQKAIMLADMAHISGLVAAG-VI--PSPFE-YA-DVVTTTTHKSLRGPR 261 (356)
Q Consensus 192 ~~k~v~l~-~~n-~g~~~~l~~I---~~la~~~g~~vivD~a~~~g~~~~~-~~--~~~l~-~~-D~~~~s~~K~l~gp~ 261 (356)
++++|+++ ++| ||...+.+++ +++|+++++++|+|++|........ .. ...+. +. .+++.|++|.+ |.+
T Consensus 148 ~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~ 226 (363)
T PF00155_consen 148 RPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSF-GLP 226 (363)
T ss_dssp TEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTT-TSG
T ss_pred ccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccc-ccc
Confidence 35677777 777 8977765555 5559999999999999875443311 00 00001 12 48999999977 434
Q ss_pred c---eEEEEec
Q 018401 262 G---AMIFFRK 269 (356)
Q Consensus 262 g---G~l~~~~ 269 (356)
| |++++++
T Consensus 227 GlRvG~i~~~~ 237 (363)
T PF00155_consen 227 GLRVGYIVAPP 237 (363)
T ss_dssp GGTEEEEEEEH
T ss_pred ccccccccchh
Confidence 4 9999976
No 237
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.65 E-value=2.9e-15 Score=146.71 Aligned_cols=203 Identities=14% Similarity=0.093 Sum_probs=134.0
Q ss_pred cCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHH-HHcCC--CC---CccccCCCc
Q 018401 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL-EAFRL--DP---EKWGGSLSG 118 (356)
Q Consensus 47 ~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la-~~~g~--~~---~~v~v~~sg 118 (356)
+.|+|..++. ++|+.|.++. +.+.. . .| +...+..++++++.+.+. +.++. .+ ++|++|+|+
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~-~~~~~-~--~Y------~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga 170 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELV-DGIIG-D--NY------PVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGG 170 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHH-HHHhc-C--CC------CCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCH
Confidence 4577776665 3566777744 44432 1 23 333556778877776554 33332 22 367779999
Q ss_pred hHHHHHHHHh-----hcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC-CCCCCHHHHHHHhhhcC
Q 018401 119 SPSNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TGYIDYDQLEKSATLFR 192 (356)
Q Consensus 119 s~a~~~~l~a-----l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~i~~~~ 192 (356)
++++..++.+ +++|||+|++++|.|. .+...+.+.|..++.++++.+++ ++.+|.+++++++++ +
T Consensus 171 ~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~--------~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~-~ 241 (527)
T PRK09275 171 TAAMCYIFDSLKENGLLKAGDKIALMTPIFT--------PYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP-S 241 (527)
T ss_pred HHHHHHHHHHHhhhhcCCCCCEEEEeCCChH--------HHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC-C
Confidence 9998878776 6899999999995554 33334455665566676665533 478999999998876 8
Q ss_pred CcEEEEc-CCC-CCCccc---HHHHHHHHHH--cCCEEEEeccchhhhcccCCCC-CC-CCCccEEEeCCCCcCC--CCC
Q 018401 193 PKLIVAG-ASA-YARLYD---YERIRKVCNK--QKAIMLADMAHISGLVAAGVIP-SP-FEYADVVTTTTHKSLR--GPR 261 (356)
Q Consensus 193 ~k~v~l~-~~n-~g~~~~---l~~I~~la~~--~g~~vivD~a~~~g~~~~~~~~-~~-l~~~D~~~~s~~K~l~--gp~ 261 (356)
+|+|+++ |+| ||.+.+ +++|+++|++ ++++||+|+++.. ... .... .. +..--+++.|.+|.++ |-+
T Consensus 242 tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~-f~~-~~~s~~~~~~~~~I~v~SfSK~f~mtG~R 319 (527)
T PRK09275 242 IKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGT-FVD-DFRSLFAVLPYNTILVYSFSKYFGATGWR 319 (527)
T ss_pred CCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChh-hcc-cccCHHHhCCCCEEEEeehhhhccCcHhH
Confidence 9999987 888 997776 6677888854 5999999999742 111 1100 00 1123488899999873 333
Q ss_pred ceEEEEecC
Q 018401 262 GAMIFFRKG 270 (356)
Q Consensus 262 gG~l~~~~~ 270 (356)
-|+++.+++
T Consensus 320 lG~i~~~~~ 328 (527)
T PRK09275 320 LGVIALHED 328 (527)
T ss_pred HhhhhcCch
Confidence 399988764
No 238
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.65 E-value=4.6e-15 Score=142.95 Aligned_cols=208 Identities=14% Similarity=0.079 Sum_probs=131.9
Q ss_pred HcCCeeecCCC---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC--CCCCcccc--CCCc
Q 018401 46 WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGG--SLSG 118 (356)
Q Consensus 46 ~~~i~L~~~~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~v~v--~~sg 118 (356)
++.++|..+.. .++..+.+++.+++.... .......|+...+..++++++.+++.+..+ +++++|++ |.++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~ 106 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIA--EKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSG 106 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhc--cccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCc
Confidence 46688887652 334455566665543211 001113355557788899888888765543 46777773 7777
Q ss_pred hHHHHHHHH---hhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC-CCCCCCCHHHHHHHhhh--cC
Q 018401 119 SPSNFQVYT---ALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN-ESTGYIDYDQLEKSATL--FR 192 (356)
Q Consensus 119 s~a~~~~l~---al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~d~~~l~~~i~~--~~ 192 (356)
++++..++. ++++|||+|++++|+|..+ ...+...|++++.+ +.. .+++.+|++.+++++.+ .+
T Consensus 107 ~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~--------~~~~~~~G~~~~~v--~l~~~~~~~~d~~~l~~~~~~~~~~ 176 (404)
T PTZ00376 107 TGALRLGFEFLKRFLPAGTTVYVSNPTWPNH--------VNIFKSAGLNVKEY--RYYDPKTKGLDFDGMLEDLRTAPNG 176 (404)
T ss_pred chHHHHHHHHHHHhcCCCCEEEEcCCCchhH--------HHHHHHcCCceeec--cccCcccCCcCHHHHHHHHHhCCCC
Confidence 777765553 6689999999999555443 33556778777555 442 23478999999998863 13
Q ss_pred CcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC-------CCCC-CCCCccEEEeCCCCcCC-
Q 018401 193 PKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-------VIPS-PFEYADVVTTTTHKSLR- 258 (356)
Q Consensus 193 ~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~-------~~~~-~l~~~D~~~~s~~K~l~- 258 (356)
+++++++ |+| ||.+.+ +++|.++|++|++++|+|++.. +....+ +... ....--+++.|++|.++
T Consensus 177 ~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~ 255 (404)
T PTZ00376 177 SVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQ-GFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGL 255 (404)
T ss_pred CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhc-CccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccc
Confidence 5666666 888 996665 6677888999999999999853 111100 0000 00002378899999875
Q ss_pred -CCCceEEE
Q 018401 259 -GPRGAMIF 266 (356)
Q Consensus 259 -gp~gG~l~ 266 (356)
|-+-|+++
T Consensus 256 ~GlRvG~~~ 264 (404)
T PTZ00376 256 YGERIGALH 264 (404)
T ss_pred cccccceEE
Confidence 34448874
No 239
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.65 E-value=6.7e-15 Score=139.52 Aligned_cols=191 Identities=15% Similarity=0.049 Sum_probs=126.0
Q ss_pred cCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC---CCCCccccCCCchHH
Q 018401 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR---LDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g---~~~~~v~v~~sgs~a 121 (356)
..++|..+++ ++++.+.+++.+.... . .|+. ..+..++++++++++.+.+| ++++++++|+|++++
T Consensus 22 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~--~Y~~------~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~ 92 (357)
T TIGR03539 22 GIVDLSVGTPVDPVPPLIRAALAAAADA-P--GYPQ------TWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKEL 92 (357)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhh-C--CCCc------ccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHH
Confidence 4678876654 4567888888765432 1 2332 24456788888888888765 567888889999998
Q ss_pred HHHHHHhh-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 018401 122 NFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 122 ~~~~l~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~- 199 (356)
+..++..+ +++||.|++++++|.++.. .+...|++++.+ + |++.+ ...++++|+++
T Consensus 93 i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~v----~------~~~~l----~~~~~~~v~~~~ 150 (357)
T TIGR03539 93 VAWLPTLLGLGPGDTVVIPELAYPTYEV--------GALLAGATPVAA----D------DPTEL----DPVGPDLIWLNS 150 (357)
T ss_pred HHHHHHHHcCCCCCEEEECCCCcHHHHH--------HHHhcCCEEecc----C------Chhhc----CccCccEEEEeC
Confidence 88777777 7999999999966654432 334456544322 1 22322 22378999887
Q ss_pred CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC--CCCC-----CCC-CccEEEeCCCCcC--CCCCceEE
Q 018401 200 ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG--VIPS-----PFE-YADVVTTTTHKSL--RGPRGAMI 265 (356)
Q Consensus 200 ~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~--~~~~-----~l~-~~D~~~~s~~K~l--~gp~gG~l 265 (356)
++| +|...+ +++|.++|+++|+++|+|+++.. ....+ .... +.. .-.+++.|.+|.+ .|.+.|++
T Consensus 151 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~ 229 (357)
T TIGR03539 151 PGNPTGRVLSVDELRAIVAWARERGAVVASDECYLE-LGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFV 229 (357)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhh-hccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEE
Confidence 888 897775 66788899999999999999752 11111 0000 000 1238889999976 34455888
Q ss_pred EEec
Q 018401 266 FFRK 269 (356)
Q Consensus 266 ~~~~ 269 (356)
+.++
T Consensus 230 i~~~ 233 (357)
T TIGR03539 230 AGDP 233 (357)
T ss_pred ecCH
Confidence 8665
No 240
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.65 E-value=4.7e-15 Score=134.80 Aligned_cols=224 Identities=19% Similarity=0.156 Sum_probs=157.6
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchh-HHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh--cCCCCe
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEY-IDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL--LKPHDR 135 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al--~~~gd~ 135 (356)
+|+|++|+.+.+.. +..|-.+.|...|+.. ...|| +.+|++.+-+.. ++.+|..-||...+..+ .-||-+
T Consensus 187 Hp~V~~A~~~tl~~-hG~GAGGTRNIsG~s~~hv~LE----~eLA~LHqK~aA--LlFsSCfVANDstLftLak~lpgce 259 (570)
T KOG1360|consen 187 HPEVLDAMHDTLDR-HGAGAGGTRNISGHSKHHVRLE----AELADLHQKEAA--LLFSSCFVANDSTLFTLAKKLPGCE 259 (570)
T ss_pred ChHHHHHHHHHHHH-cCCCcCCccccCCCCchhhhHH----HHHHHHhcCcce--eeeeeeeeccchHHHHHHHHCCCcE
Confidence 79999999999986 4445555555555433 44555 788888887765 44677777787666665 459999
Q ss_pred eeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh---cCCcEEEEc--CCCCCCcccHH
Q 018401 136 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAG--ASAYARLYDYE 210 (356)
Q Consensus 136 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~---~~~k~v~l~--~~n~g~~~~l~ 210 (356)
|+.....|.+.+. +++-+++.-. + +. .-|+++|++++.. ..+|+|.+. .+..|.+.|++
T Consensus 260 i~SD~gNHASMI~--------GIrns~v~K~-I-Fr------HND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcple 323 (570)
T KOG1360|consen 260 IFSDEGNHASMIQ--------GIRNSRVPKH-I-FR------HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLE 323 (570)
T ss_pred EeccccchHHHHH--------HhhhcCCcce-e-ec------cCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHH
Confidence 9988888887765 4433332211 1 12 2378888888764 247888885 56689999999
Q ss_pred HHHHHHHHcCCEEEEeccchhhhccc---CCCC-CC-CCCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhH
Q 018401 211 RIRKVCNKQKAIMLADMAHISGLVAA---GVIP-SP-FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDY 285 (356)
Q Consensus 211 ~I~~la~~~g~~vivD~a~~~g~~~~---~~~~-~~-l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~ 285 (356)
+|++++++||++.++|++|++|.... ++.+ .+ +..+|+++++..|+| |--||++.... .+
T Consensus 324 elcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVGGYIAat~--------------~L 388 (570)
T KOG1360|consen 324 ELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVGGYIAATR--------------KL 388 (570)
T ss_pred HHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhc-ccccceehhhh--------------hH
Confidence 99999999999999999999997643 1211 12 235899999999987 55678888766 56
Q ss_pred HHhhccccCCCCC-CCCcHHHHHHHHHHHHHHhccc
Q 018401 286 EEKINQAVFPGLQ-GGPHNHTITGLAVALKQVCTLI 320 (356)
Q Consensus 286 ~~~~~~~~~~~~~-gt~~~~~~~al~~Al~~~~~~~ 320 (356)
.+.++.......| .+.+...+++..+|.+++..+.
T Consensus 389 vDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~e 424 (570)
T KOG1360|consen 389 VDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEE 424 (570)
T ss_pred HHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhh
Confidence 6666544323334 4555666777778999987763
No 241
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.65 E-value=7.7e-15 Score=141.68 Aligned_cols=244 Identities=12% Similarity=0.076 Sum_probs=147.9
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
+.|++..+.+ ..+|.|.+++.+.+.... .++.. ....++..++++.++++++.+.+++++++||+++
T Consensus 37 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~------~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea 108 (413)
T cd00610 37 RYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLT--HFSLG------FFYNEPAVELAELLLALTPEGLDKVFFVNSGTEA 108 (413)
T ss_pred EEEEcCccHHhhccCCCCHHHHHHHHHHHHhCc--CccCc------ccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHH
Confidence 4577765422 257999999999886421 11111 0112445567799999999777778889999999
Q ss_pred HHHHHHhh--cCCCCeeeecCCCCCcccCccccccc-----ccccccceeeEEEecccCC-----CCCCCCHHHHHHHhh
Q 018401 122 NFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDT-----KKISAVSIFFETMPYRLNE-----STGYIDYDQLEKSAT 189 (356)
Q Consensus 122 ~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~v~~~~~~-----~~~~~d~~~l~~~i~ 189 (356)
+..++..+ ..++++|++.+..|.+.......... .........+..+ +.+. .+...|+++|++.+.
T Consensus 109 ~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~l~~~l~ 186 (413)
T cd00610 109 VEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHV--PYPYRYRPPAELADDLEALEEALE 186 (413)
T ss_pred HHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEe--CCCccccchhhHHHHHHHHHHHHh
Confidence 99888876 46889999998766554321111100 0000011123233 2220 012348899999887
Q ss_pred h--cCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccC----CCCCCCCCccEEEeCCCCcC
Q 018401 190 L--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSPFEYADVVTTTTHKSL 257 (356)
Q Consensus 190 ~--~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~----~~~~~l~~~D~~~~s~~K~l 257 (356)
+ .+++++++.+.+ +|...+ +++|.++|++||+++|+|++|+ |....+ ....+ ...|++++| |++
T Consensus 187 ~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~-~~~d~~t~s--K~l 262 (413)
T cd00610 187 EHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFG-VEPDIVTLG--KGL 262 (413)
T ss_pred cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcC-CCCCeEEEc--ccc
Confidence 5 246677776443 577666 9999999999999999999986 221111 01111 125777665 999
Q ss_pred CCCCc-eEEEEecCcchhccCCcchhhhHHHhh--ccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 258 RGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKI--NQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 258 ~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+++.. |+++.++ ++.+.+ ........ .+.+...+++..++++.+.++
T Consensus 263 ~~g~~~g~~~~~~--------------~~~~~~~~~~~~~~~t-~~~~~~~~~a~~a~l~~l~~~ 312 (413)
T cd00610 263 GGGLPLGAVLGRE--------------EIMDAFPAGPGLHGGT-FGGNPLACAAALAVLEVLEEE 312 (413)
T ss_pred cCccccEEEEEcH--------------HHHHhhccCCCCCCCC-CCcCHHHHHHHHHHHHHHHhc
Confidence 76443 8777766 455553 11111112 234556677777889888763
No 242
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.65 E-value=2.3e-15 Score=142.07 Aligned_cols=242 Identities=9% Similarity=0.034 Sum_probs=151.2
Q ss_pred eeecCCCCCcHH-HHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC-cccc-CCCchHHHHHHH
Q 018401 50 ELIPSENFTSVS-VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE-KWGG-SLSGSPSNFQVY 126 (356)
Q Consensus 50 ~L~~~~~~~~~~-V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~-~v~v-~~sgs~a~~~~l 126 (356)
.+.+++....|. .++++.+.+-.. .|. .....++.+++.+.++++++.+.+ ++++ ++|||.++.+++
T Consensus 6 ~f~~gp~~~~~~~~~~~~~~~~~~~--------~HR--s~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~ 75 (374)
T TIGR01365 6 CFSSGPCAKRPGWSIEELKNAPLGR--------SHR--SKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMAL 75 (374)
T ss_pred CcCCCccCCCchhhHHHHhhhhccc--------CcC--CHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHH
Confidence 344555555666 555665433221 111 133556777888999999998533 3455 999999999999
Q ss_pred Hhhc-CCCCeeeecCCCCCcccCcccccccccccccce-eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCC
Q 018401 127 TALL-KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI-FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAY 203 (356)
Q Consensus 127 ~al~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n~ 203 (356)
..++ ++||+|++.. .++-.+ ....++..|. .+..+ ... .+..+|+++++. +..+.++. .+.|
T Consensus 76 ~nl~~~~g~~vLv~g-----~FG~r~--~~eia~~~g~~~v~~l--~~~-~g~~~~~~~ve~-----~~~v~~vhnETST 140 (374)
T TIGR01365 76 WSMLGCRGVDVLAWE-----SFGKGW--VTDVTKQLKLPDVRVL--EAE-YGKLPDLKKVDF-----KNDVVFTWNGTTS 140 (374)
T ss_pred HHcCCCCCCeEEEEC-----HHHHHH--HHHHHHhcCCCCcEEE--cCC-CCCCCCHHHcCC-----CCCEEEecCCCch
Confidence 9998 5899998743 111111 1022334565 24445 222 335789998862 12233222 5558
Q ss_pred CCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh-ccCC---
Q 018401 204 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI-NKQG--- 278 (356)
Q Consensus 204 g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~-~~~g--- 278 (356)
|...|+++|+..+ +++++++|++.++|..++++. . +|+++++++|+|++|+| ++++++++.... ...+
T Consensus 141 Gv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d--~---iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~ 213 (374)
T TIGR01365 141 GVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH--K---LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAW 213 (374)
T ss_pred heecccccccccc--CCCcEEEEccchhcCCCCChh--H---CcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCC
Confidence 9999997766332 589999999999999987765 3 99999999999999999 999999864222 1101
Q ss_pred -cchhhhHHHh---hccccCCCCCCCCcHHHHHHHHHHHHHHhcccccc
Q 018401 279 -KEVFYDYEEK---INQAVFPGLQGGPHNHTITGLAVALKQVCTLITFS 323 (356)
Q Consensus 279 -~~~~~~~~~~---~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~ 323 (356)
.+..+++... ...........||++..+.++..++++++++.+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle 262 (374)
T TIGR01365 214 PLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLK 262 (374)
T ss_pred CChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHH
Confidence 1111111000 00000112346888888899999998887754444
No 243
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.64 E-value=9.2e-15 Score=138.62 Aligned_cols=173 Identities=18% Similarity=0.172 Sum_probs=119.3
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCC-------ccccCCCchHHHHHHHHhhcC--------CC-----C-eeeecCCCCCc
Q 018401 87 NEYIDMAESLCQKRALEAFRLDPE-------KWGGSLSGSPSNFQVYTALLK--------PH-----D-RIMALDLPHGG 145 (356)
Q Consensus 87 ~~~~~~l~~~~~~~la~~~g~~~~-------~v~v~~sgs~a~~~~l~al~~--------~g-----d-~Vl~~~~~~~~ 145 (356)
.....++|.++.+|+++++|.+.. .-++|+|||++|..++.+.-+ .| . .|++++..|.+
T Consensus 74 ~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S 153 (373)
T PF00282_consen 74 SPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYS 153 (373)
T ss_dssp SHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-TH
T ss_pred ccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccH
Confidence 355778999999999999999721 124589999888876654311 12 2 45566666766
Q ss_pred ccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc--C---CcEEEEc--CCCCCCcccHHHHHHHHHH
Q 018401 146 HLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--R---PKLIVAG--ASAYARLYDYERIRKVCNK 218 (356)
Q Consensus 146 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~--~---~k~v~l~--~~n~g~~~~l~~I~~la~~ 218 (356)
... .+.+.|..++.| +.+ +++.+|+++|++++.+. + +-+|+.+ .+++|.+.|+++|.++|++
T Consensus 154 ~~K--------aa~~lGlg~~~I--~~~-~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~ 222 (373)
T PF00282_consen 154 IEK--------AARILGLGVRKI--PTD-EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEK 222 (373)
T ss_dssp HHH--------HHHHTTSEEEEE---BB-TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHH
T ss_pred HHH--------hcceeeeEEEEe--cCC-cchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccc
Confidence 543 556778777666 566 46899999999988642 2 2134444 4448999999999999999
Q ss_pred cCCEEEEeccchhhhcccC-C--CCCCCCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 219 QKAIMLADMAHISGLVAAG-V--IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 219 ~g~~vivD~a~~~g~~~~~-~--~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
+++|++||+|++....... . ...+++.+|.++.++|||++.|.+ |++++++.
T Consensus 223 ~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~ 278 (373)
T PF00282_consen 223 YNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDK 278 (373)
T ss_dssp CT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSG
T ss_pred cceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecc
Confidence 9999999999754333211 1 123445799999999999999999 99999885
No 244
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=2e-15 Score=142.93 Aligned_cols=160 Identities=16% Similarity=0.088 Sum_probs=113.6
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCC-CeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
.+++.+++++|+++++|++++|+++++..++.++++|| |+|+++.++| ..+...+...|++++.+ +.+
T Consensus 64 ~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y--------~~y~~~~~~~g~~v~~v--~~~- 132 (354)
T PRK04635 64 ELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTY--------GMYAISAETFNVGVKAL--PLT- 132 (354)
T ss_pred HHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCCh--------HHHHHHHHHcCCEEEEE--ecC-
Confidence 34578888899999998889999999998999999999 8999988554 33333445567777666 444
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHc-CCEEEEeccchhhhcccCCCCC-CCCCccEEE
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQ-KAIMLADMAHISGLVAAGVIPS-PFEYADVVT 250 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~-g~~vivD~a~~~g~~~~~~~~~-~l~~~D~~~ 250 (356)
+++.+|.+.+++ + + ++|+|+++ |+| ||.+.+.+++.++++.. +++||+|+++.--......... ....--+++
T Consensus 133 ~~~~~~~~~l~~-~-~-~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~ 209 (354)
T PRK04635 133 ADYQLPLDYIEQ-L-D-GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVL 209 (354)
T ss_pred CCCCCCHHHHHh-c-c-CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEE
Confidence 346789988863 4 4 79999998 888 99999999999998764 7999999997432110000000 000012678
Q ss_pred eCCCCcCC--CCCceEEEEec
Q 018401 251 TTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 251 ~s~~K~l~--gp~gG~l~~~~ 269 (356)
.|++|+++ |.+-|+++.++
T Consensus 210 ~S~SK~~~l~GlRlG~~i~~~ 230 (354)
T PRK04635 210 RTLSKAFALAGARCGFTLANE 230 (354)
T ss_pred echHHHhhhhHHHHhhhhCCH
Confidence 89999863 22239998876
No 245
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.64 E-value=1.8e-15 Score=143.62 Aligned_cols=148 Identities=16% Similarity=0.108 Sum_probs=103.3
Q ss_pred HHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCC
Q 018401 97 CQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 176 (356)
Q Consensus 97 ~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 176 (356)
+++.+++++ . ++.+++++|++++..++.+++++||+|+++++.|+++..... ......|++++.+ +.+ +.
T Consensus 56 Le~~lA~l~--~-~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~----~~l~~~G~~v~~v--~~~-~~ 125 (366)
T PRK07582 56 LEAALGELE--G-AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAR----EYLAPLGVTVREA--PTA-GM 125 (366)
T ss_pred HHHHHHHHc--C-CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHH----HHHhcCeEEEEEE--CCC-Ch
Confidence 447778777 2 234567888888888888999999999999876654422111 0112246555555 333 11
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchh--hhcccCCCCCCCCCccEEEeC
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHIS--GLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~--g~~~~~~~~~~l~~~D~~~~s 252 (356)
.+ .+.+ ++++|+++ ++| +|.+.|+++|+++|+++|+++++|++|+. |..+.+ . ++|+++.|
T Consensus 126 ----~~----~~~~-~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~---~---g~Divv~S 190 (366)
T PRK07582 126 ----AE----AALA-GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRPLE---L---GADLVVAS 190 (366)
T ss_pred ----HH----Hhcc-CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCchh---c---CCcEEEec
Confidence 11 2234 78999987 777 78889999999999999999999999853 222211 2 48999999
Q ss_pred CCCcCCCCCc---eEEEEec
Q 018401 253 THKSLRGPRG---AMIFFRK 269 (356)
Q Consensus 253 ~~K~l~gp~g---G~l~~~~ 269 (356)
+|||++|+.| |+++.++
T Consensus 191 ~sK~l~G~~g~~~G~v~~~~ 210 (366)
T PRK07582 191 DTKALTGHSDLLLGYVAGRD 210 (366)
T ss_pred ccccccCCCCeeEEEEEcCc
Confidence 9999999776 7777654
No 246
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.64 E-value=9.9e-15 Score=138.18 Aligned_cols=194 Identities=16% Similarity=0.147 Sum_probs=129.4
Q ss_pred CCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHH
Q 018401 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 48 ~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~ 125 (356)
.++|..++++ +|+.+++++.+.+... ..|+.. ... .+|+.++++++++++++++++|+++++..+
T Consensus 21 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~--~~Y~~~-------~~~----~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~ 87 (354)
T PRK06358 21 ILDFSANINPLGVPESLKQAITENLDKL--VEYPDP-------DYL----ELRKRIASFEQLDLENVILGNGATELIFNI 87 (354)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHhh--hcCCCc-------cHH----HHHHHHHHHhCCChhhEEECCCHHHHHHHH
Confidence 5788887775 5788999998876431 133322 122 456888888899999988899999998877
Q ss_pred HHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 018401 126 YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG-ASA- 202 (356)
Q Consensus 126 l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~l~-~~n- 202 (356)
+.++ .+ +.|+++.+.|+.+ ...+...|.+++.++ .+. .++.+| +++.+.+.+ ++++++++ |+|
T Consensus 88 ~~~~-~~-~~v~i~~P~y~~~--------~~~~~~~g~~~~~~~--~~~~~~~~~d-~~~~~~~~~-~~~~v~~~~P~NP 153 (354)
T PRK06358 88 VKVT-KP-KKVLILAPTFAEY--------ERALKAFDAEIEYAE--LTEETNFAAN-EIVLEEIKE-EIDLVFLCNPNNP 153 (354)
T ss_pred HHHh-CC-CcEEEecCChHHH--------HHHHHHcCCeeEEEe--CccccCCCcc-HHHHHhhcc-CCCEEEEeCCCCC
Confidence 7775 44 6888888555433 334445676665564 442 235788 666666665 78998777 888
Q ss_pred CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCC---CC--CccEEEeCCCCcCC--CCCceEEEEec
Q 018401 203 YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FE--YADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 203 ~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~---l~--~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
||...+ +++|.++|+++++++|+|+++. .....+..... +. .--+++.|.+|.++ |-+-|+++..+
T Consensus 154 tG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~ 229 (354)
T PRK06358 154 TGQLISKEEMKKILDKCEKRNIYLIIDEAFM-DFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN 229 (354)
T ss_pred CCCccCHHHHHHHHHHHHhcCCEEEEeCccc-ccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC
Confidence 897776 6778888999999999999964 21111100000 01 12378899999764 33349998754
No 247
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.63 E-value=9.3e-16 Score=140.09 Aligned_cols=190 Identities=18% Similarity=0.204 Sum_probs=130.4
Q ss_pred CCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCC
Q 018401 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPH 133 (356)
Q Consensus 54 ~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~g 133 (356)
+++ +.|++++++.+..... .-|+.......++ +.++++||.+.. +|+.+||.+|..+++++++|+
T Consensus 4 SD~-~~~~m~~a~~~a~~gd--------~~Yg~D~~~~~l~----~~i~~l~g~e~a--~f~~sGT~An~~al~~~~~~~ 68 (290)
T PF01212_consen 4 SDT-PTPAMLEAMAAANVGD--------DAYGEDPTTARLE----ERIAELFGKEAA--LFVPSGTMANQLALRAHLRPG 68 (290)
T ss_dssp -SS-S-HHEEHHHHHTTSB---------CCTTSSHHHHHHH----HHHHHHHTSSEE--EEESSHHHHHHHHHHHHHHTT
T ss_pred ccC-CCHHHHHHHHccccCC--------cccCCChhHHHHH----HHHHHHcCCCEE--EEeCCCChHHHHHHHHHHhcC
Confidence 455 7889999996554331 1244444455554 888999998765 577899999999999999999
Q ss_pred CeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh-----cCCcEEEEc-CCCC--CC
Q 018401 134 DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----FRPKLIVAG-ASAY--AR 205 (356)
Q Consensus 134 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~-----~~~k~v~l~-~~n~--g~ 205 (356)
+.|++....|......+. ...+.|.++..+ +.. +.+.+|+++|++.+.. .++++|.++ ++|. |.
T Consensus 69 ~~vi~~~~aHi~~~E~ga-----~~~~~G~~~~~l--~~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~ 140 (290)
T PF01212_consen 69 ESVICADTAHIHFDETGA-----IEELSGAKLIPL--PSD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGT 140 (290)
T ss_dssp EEEEEETTEHHHHSSTTH-----HHHHTTCEEEEE--BEC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB
T ss_pred Cceeccccceeeeeccch-----hhHhcCcEEEEC--CCc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCe
Confidence 999998765543333221 124567666544 443 2378999999999876 357899998 6666 76
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeccchhhh------cccCCCCCCCCCccEEEeCCCCcCCCCCceEEEEecC
Q 018401 206 LYD---YERIRKVCNKQKAIMLADMAHISGL------VAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 270 (356)
Q Consensus 206 ~~~---l~~I~~la~~~g~~vivD~a~~~g~------~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~ 270 (356)
+.+ +++|.++|++||+.|+.|+|..... .+.++. .++|++++|++|.++.|.|++++.+++
T Consensus 141 ~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~----~~~D~v~~~~tK~~g~~~Gavl~~~~~ 210 (290)
T PF01212_consen 141 VYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA----AGADSVSFGGTKNGGAPGGAVLAGNKE 210 (290)
T ss_dssp ---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH----TTSSEEEEETTSTT-SSSEEEEEESHH
T ss_pred eCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh----hhCCEEEEEEEcccccccceEEEechH
Confidence 664 6677888999999999999964322 222221 249999999999998998899999885
No 248
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.62 E-value=2e-14 Score=136.36 Aligned_cols=195 Identities=14% Similarity=0.102 Sum_probs=130.8
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.++|..++|+ +|+.+++++.+.+... .+|+.. ... .+|+.++++++++++++++++|+++++..
T Consensus 23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~~--~~Y~~~-------~~~----~Lr~aia~~~~v~~~~I~it~G~~~~i~~ 89 (360)
T PRK07392 23 AILDFSASINPLGPPESVIAAIQSALSAL--RHYPDP-------DYR----ELRLALAQHHQLPPEWILPGNGAAELLTW 89 (360)
T ss_pred cEEEeCCcCCCCCCCHHHHHHHHHHHHHh--hcCCCc-------CHH----HHHHHHHHHhCcChhhEEECCCHHHHHHH
Confidence 45888888775 5788999988766541 133322 122 34577778889999988889899999987
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCC----CCCHHHHHHHhhhcCCcEEEEc-
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG----YIDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~----~~d~~~l~~~i~~~~~k~v~l~- 199 (356)
+++++ .+||.|++++|+|. .+...+...|++++.++ .+.++. ..+++++++.. + ++++++++
T Consensus 90 ~~~~l-~~g~~vlv~~P~y~--------~~~~~~~~~g~~~~~v~--~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~l~n 156 (360)
T PRK07392 90 AGREL-AQLRAVYLITPAFG--------DYRRALRAFGATVKELP--LPLDQPSPGLTLRLQTLPPQL-T-PNDGLLLNN 156 (360)
T ss_pred HHHHh-CCCCeEEEECCCcH--------HHHHHHHHcCCeEEEEe--cccccCCcccccCHHHHHHhc-c-CCCEEEEeC
Confidence 77775 47899999995554 33435556777776664 442222 24677766543 3 67888887
Q ss_pred CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCC---CC--CccEEEeCCCCcCC--CCCceEEEEec
Q 018401 200 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FE--YADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 200 ~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~---l~--~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
|+| ||.+.+.++|.++++++++ +|+|+++.- ....+..... +. .--+++.|++|.++ |.+-|+++.++
T Consensus 157 P~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~-~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~ 232 (360)
T PRK07392 157 PHNPTGKLWSREAILPLLEQFAL-VVVDEAFMD-FLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP 232 (360)
T ss_pred CCCCCCCCcCHHHHHHHHHHCCE-EEEECchhh-hccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH
Confidence 888 9999999999999999985 667999742 1111100000 01 12378899999774 44449998876
No 249
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.62 E-value=1.8e-14 Score=139.37 Aligned_cols=214 Identities=11% Similarity=0.067 Sum_probs=130.0
Q ss_pred HcCCeeecCCCCC-c---HHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCch
Q 018401 46 WKGLELIPSENFT-S---VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGS 119 (356)
Q Consensus 46 ~~~i~L~~~~~~~-~---~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs 119 (356)
.+.|+|..+.+.. + +.+.+++.+.+...- .......|+...+..++++++.+++.+.+|. ++++|++|+|++
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~ 107 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGK--LTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQ 107 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcc--cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChH
Confidence 3568887665432 1 345566655544310 0011123444456678888888999888775 778888898999
Q ss_pred HHHHHHHHhhcC-----CCCeeee-cCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCC
Q 018401 120 PSNFQVYTALLK-----PHDRIMA-LDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRP 193 (356)
Q Consensus 120 ~a~~~~l~al~~-----~gd~Vl~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~ 193 (356)
+++..+++++++ +||.|++ ..|+|+.+...... .+ ...+.....++++.+...+.+|+++|+ +.+ ++
T Consensus 108 ~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~-~~ 180 (416)
T PRK09440 108 SAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLE---ED-LFVSYRPNIELLPEGQFKYHVDFEHLH--IDE-DT 180 (416)
T ss_pred HHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhc---cC-ceeecccccccccccccccCCCHHHcc--cCC-Cc
Confidence 999888888874 6899999 68777655321110 00 011111222322221012578999887 343 78
Q ss_pred cEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc---CCCCCCCCCccEEEeCCCCcC-CCCCceE
Q 018401 194 KLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA---GVIPSPFEYADVVTTTTHKSL-RGPRGAM 264 (356)
Q Consensus 194 k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~---~~~~~~l~~~D~~~~s~~K~l-~gp~gG~ 264 (356)
++++++ |+| ||.+.+ +++|.++|+++++++|+|+++....... +.... ...--+++.|++|+. .|.+-|+
T Consensus 181 ~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~-~~~~vI~~~SfSK~~~pGlRiG~ 259 (416)
T PRK09440 181 GAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPL-WNPNIILCMSLSKLGLPGVRCGI 259 (416)
T ss_pred eEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCcc-ccCCeEEEecccccCCCcceEEE
Confidence 888887 888 997776 6677888999999999999985211000 11000 011237789999952 2333399
Q ss_pred EEEec
Q 018401 265 IFFRK 269 (356)
Q Consensus 265 l~~~~ 269 (356)
++.++
T Consensus 260 ~i~~~ 264 (416)
T PRK09440 260 VIADE 264 (416)
T ss_pred EeCCH
Confidence 88766
No 250
>PRK07505 hypothetical protein; Provisional
Probab=99.62 E-value=5.6e-14 Score=135.34 Aligned_cols=234 Identities=12% Similarity=0.073 Sum_probs=139.9
Q ss_pred cCCeeecCCCCC----cHHHHHHHHhhhhccCC-CCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSENFT----SVSVMQAVGSVMTNKYS-EGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~~~----~~~V~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..+++.+. +++ +|+|++++.+.+.. +. .+....+. ....+...++++.++++++. + .++.++|+++
T Consensus 47 ~~ld~~s~-~~lgl~~~p~v~~A~~~~l~~-~g~~~~~~~~~----~~~~~~~~~l~~~la~~~~~--~-~~~~~sG~~a 117 (402)
T PRK07505 47 TFVNFVSC-SYLGLDTHPAIIEGAVDALKR-TGSLHLSSSRT----RVRSQILKDLEEALSELFGA--S-VLTFTSCSAA 117 (402)
T ss_pred eEEEeecC-CccCCCCCHHHHHHHHHHHHH-hCCCCCCccch----hhhhHHHHHHHHHHHHHhCC--C-EEEECChHHH
Confidence 35677554 333 89999999998875 31 01111110 11233445677999999987 3 3455577778
Q ss_pred HHHHHHhh----cCCCC-eeeec-CCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 018401 122 NFQVYTAL----LKPHD-RIMAL-DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 195 (356)
Q Consensus 122 ~~~~l~al----~~~gd-~Vl~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~ 195 (356)
+..++..+ ..+|+ .|++. ...|++... .. .....+..++.+ +. .|++++++++.+ ++++
T Consensus 118 ~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~-~~-----~~~~~~~~v~~~--~~------~d~~~l~~~~~~-~~~~ 182 (402)
T PRK07505 118 HLGILPLLASGHLTGGVPPHMVFDKNAHASLNI-LK-----GICADETEVETI--DH------NDLDALEDICKT-NKTV 182 (402)
T ss_pred HHHHHHHHHhcccCCCCCCEEEEchhhhHhHHh-hh-----hhhhcCCeEEEe--CC------CCHHHHHHHHhc-CCCE
Confidence 77666443 22233 24444 355554321 01 111112233333 32 388999998876 6777
Q ss_pred EEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcc-cC--C--CCCCC--CCccEEEeCCCCcCCCCCceEEE
Q 018401 196 IVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA-AG--V--IPSPF--EYADVVTTTTHKSLRGPRGAMIF 266 (356)
Q Consensus 196 v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~-~~--~--~~~~l--~~~D~~~~s~~K~l~gp~gG~l~ 266 (356)
++++ ++| +|.+.++++|.++|+++|+++|+|++|+.+.+. .+ . ...+. ....+++.|..|.++++ ||+++
T Consensus 183 ~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-Gg~~~ 261 (402)
T PRK07505 183 AYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-GGVIM 261 (402)
T ss_pred EEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-CeEEE
Confidence 7776 666 889999999999999999999999999653221 11 0 11111 12357778999988654 67766
Q ss_pred EecCcchhccCCcchhhhHHHhhccccCCCCC-CCCcHHHHHHHHHHHHHHhc
Q 018401 267 FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQ-GGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 267 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-gt~~~~~~~al~~Al~~~~~ 318 (356)
+.+. ++.+.+.....+..+ ++++.+.++++.++++.+.+
T Consensus 262 ~~~~-------------~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~ 301 (402)
T PRK07505 262 LGDA-------------EQIELILRYAGPLAFSQSLNVAALGAILASAEIHLS 301 (402)
T ss_pred eCCH-------------HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhc
Confidence 5332 444544433233334 56777888888888886653
No 251
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.61 E-value=1.5e-14 Score=141.46 Aligned_cols=205 Identities=14% Similarity=0.122 Sum_probs=128.8
Q ss_pred cCCeeecCCCC-CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC---CCC--ccccCCCchH
Q 018401 47 KGLELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL---DPE--KWGGSLSGSP 120 (356)
Q Consensus 47 ~~i~L~~~~~~-~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~---~~~--~v~v~~sgs~ 120 (356)
+.|+|..++.. .+++++.++.+.+... .|+.. .......++.+++++.+.++. +++ +|++|+|+++
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~---~Y~~p-----~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~ 166 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGIIGD---NYPVP-----DRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTA 166 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHhhcC---CCCCC-----CCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 45777766553 3455566666654321 23221 122344444455666665442 333 6777999999
Q ss_pred HHHHHHHh-----hcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC-C-----CCCCHHHHHHHhh
Q 018401 121 SNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-T-----GYIDYDQLEKSAT 189 (356)
Q Consensus 121 a~~~~l~a-----l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~-----~~~d~~~l~~~i~ 189 (356)
++..++.+ +++|||+|++++|.|..+ ...+.+.+..++.++++.+.+ . +.+|.++++++++
T Consensus 167 al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y--------~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~ 238 (521)
T TIGR03801 167 AMCYIFDSLKANELLKKGDKIALMTPIFTPY--------LEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD 238 (521)
T ss_pred HHHHHHHHHhHhhcCCCCCEEEEeCCCcHHH--------HHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC
Confidence 98877776 689999999999555433 333444433344454454421 2 6789999998877
Q ss_pred hcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHc--CCEEEEeccchhhhcccCCCC-CC-CCCccEEEeCCCCcCC--
Q 018401 190 LFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQ--KAIMLADMAHISGLVAAGVIP-SP-FEYADVVTTTTHKSLR-- 258 (356)
Q Consensus 190 ~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~--g~~vivD~a~~~g~~~~~~~~-~~-l~~~D~~~~s~~K~l~-- 258 (356)
+ ++|+|+++ |+| ||.+.+ +++|+++|++| +++||+|+++.. ... +... .. +..--+++.|.+|+++
T Consensus 239 ~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~-f~~-~~~sl~~~~~~~vI~v~SfSK~fg~~ 315 (521)
T TIGR03801 239 P-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGT-FVD-DFRSLFAELPYNTIGVYSFSKYFGAT 315 (521)
T ss_pred C-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchh-hcc-cccchhhhCCCCEEEEEcchhhccCc
Confidence 6 89999986 888 897776 66778889887 999999999752 111 1100 00 0113488899999774
Q ss_pred CCCceEEEEecC
Q 018401 259 GPRGAMIFFRKG 270 (356)
Q Consensus 259 gp~gG~l~~~~~ 270 (356)
|-+-|+++.+++
T Consensus 316 G~RlG~i~~~~~ 327 (521)
T TIGR03801 316 GWRLGTIALHKD 327 (521)
T ss_pred hhhhhhhhcCch
Confidence 333399988753
No 252
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.60 E-value=1e-14 Score=148.58 Aligned_cols=166 Identities=16% Similarity=0.114 Sum_probs=120.9
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCcccc-CCCchHHHHHHHHhhc--------CCCCeeeecCCCCCcccCcccccccccc
Q 018401 88 EYIDMAESLCQKRALEAFRLDPEKWGG-SLSGSPSNFQVYTALL--------KPHDRIMALDLPHGGHLSHGYQTDTKKI 158 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~v~v-~~sgs~a~~~~l~al~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~~~ 158 (356)
++..++-.++.+++++++|.+.. .+ .++|+.+..+.++++- ...++|+++...|+++..+ +
T Consensus 539 QG~lq~i~elq~~l~eLtGmd~~--Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas--------a 608 (954)
T PRK12566 539 EGYRAMIDELEAWLCAITGFDAI--CMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS--------A 608 (954)
T ss_pred cCHHHHHHHHHHHHHHHHCCCeE--eecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH--------H
Confidence 33444445677999999999875 45 7888877765665542 2346788999899888432 2
Q ss_pred cccceeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCCCC-CcccHHHHHHHHHHcCCEEEEeccchhhhc
Q 018401 159 SAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASAYA-RLYDYERIRKVCNKQKAIMLADMAHISGLV 234 (356)
Q Consensus 159 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k~v~l~-~~n~g-~~~~l~~I~~la~~~g~~vivD~a~~~g~~ 234 (356)
...|.+++.+ +.+ +++.+|+++|++++.+. ++.+|+++ +++.| ...++++|+++||++|+++++|++|..+..
T Consensus 609 ~~~GieVv~V--p~D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~ 685 (954)
T PRK12566 609 QMAGMRVVIV--ECD-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQV 685 (954)
T ss_pred HHCCCEEEEe--ccC-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhcc
Confidence 3457666666 555 46799999999999732 55666666 55555 445699999999999999999999987776
Q ss_pred ccCC-CCCCCCCccEEEeCCCCcCCCCCc-eEEEEec
Q 018401 235 AAGV-IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRK 269 (356)
Q Consensus 235 ~~~~-~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~ 269 (356)
.+.. ...+ +|++++++||||++|.| |..++..
T Consensus 686 ~l~~Pg~~G---ADi~~~s~HKtf~~P~G~GGP~vG~ 719 (954)
T PRK12566 686 GLARPADIG---ADVSHMNLHKTFCIPHGGGGPGMGP 719 (954)
T ss_pred CCCChhhcC---CCEEEecCCcccCcCccCCCCccch
Confidence 6542 3444 99999999999998888 6555443
No 253
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.59 E-value=6.1e-15 Score=140.08 Aligned_cols=157 Identities=17% Similarity=0.171 Sum_probs=108.5
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeE
Q 018401 87 NEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 166 (356)
Q Consensus 87 ~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 166 (356)
++....++ +.++++.|.+.. ++++||++|+.+++.+++++||+|+++...|+..+... ...+...|+.+.
T Consensus 63 ~P~~~~lE----~~la~leg~~~a--v~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~----~~~~~~~Gi~v~ 132 (384)
T PRK06434 63 NPTVQAFE----EKYAVLENAEHA--LSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFF----NKVLKTLGIHVD 132 (384)
T ss_pred ChhHHHHH----HHHHHHhCCCcE--EEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHH----HHHHHhcCcEEE
Confidence 34455665 778888888754 45889999999899999999999999876555544221 112334465554
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC
Q 018401 167 TMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE 244 (356)
Q Consensus 167 ~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~ 244 (356)
.+ +.++. ..++ +.+.++++|++. ++| ++.+.|+++|+++|++++ +++|++|+.+... .+++
T Consensus 133 fv--d~~~~-~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~-----~pl~ 195 (384)
T PRK06434 133 YI--DTDRL-NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQ-----NPLD 195 (384)
T ss_pred EE--CCCCh-hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccC-----Cchh
Confidence 44 44311 1122 222368999997 777 788999999999999998 4679998654331 1222
Q ss_pred -CccEEEeCCCCcCCCCC---ceEEEEecC
Q 018401 245 -YADVVTTTTHKSLRGPR---GAMIFFRKG 270 (356)
Q Consensus 245 -~~D~~~~s~~K~l~gp~---gG~l~~~~~ 270 (356)
++|++++|+||+++|+. ||+++++++
T Consensus 196 ~gaDivv~S~tK~i~G~~d~~gG~vv~~~~ 225 (384)
T PRK06434 196 LGADVVIHSATKYISGHSDVVMGVAGTNNK 225 (384)
T ss_pred cCCCEEEeecccccCCCCCceEEEEecCcH
Confidence 49999999999998866 477777553
No 254
>PRK07049 methionine gamma-lyase; Validated
Probab=99.59 E-value=2.5e-14 Score=138.23 Aligned_cols=156 Identities=18% Similarity=0.169 Sum_probs=109.8
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.+++.++++.|.+ ++++++||++++..++.+++++||+|+++.+.|+++..... ......|+++..+ + +
T Consensus 87 ~Le~~lA~leg~~--~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~----~~l~~~Gi~~v~~--~-~-- 155 (427)
T PRK07049 87 IVEDRLAVYEGAE--SAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLA----KTFRNFGVGAVGF--A-D-- 155 (427)
T ss_pred HHHHHHHHHhCCC--cEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHH----HHHHhcCcEEEEE--e-C--
Confidence 3448888998865 34668899999998999999999999999976665532110 0112235443223 2 1
Q ss_pred CCCCCHHHHHHHhh----hcCCcEEEEc-CCC-CCCcccHHHHHHHHHH------cCCEEEEeccchhhhcccCCCCCCC
Q 018401 176 TGYIDYDQLEKSAT----LFRPKLIVAG-ASA-YARLYDYERIRKVCNK------QKAIMLADMAHISGLVAAGVIPSPF 243 (356)
Q Consensus 176 ~~~~d~~~l~~~i~----~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~------~g~~vivD~a~~~g~~~~~~~~~~l 243 (356)
..|++++++++. +.++|+|+++ |+| +|.+.|+++|.++++. +++++++|++...... . .++
T Consensus 156 --~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~---~--~pl 228 (427)
T PRK07049 156 --GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVF---Q--KPL 228 (427)
T ss_pred --CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccccc---C--Ccc
Confidence 246777776664 2368999998 888 8999999999999988 8999999998532211 1 122
Q ss_pred C-CccEEEeCCCCcCCCCCc---eEEEEec
Q 018401 244 E-YADVVTTTTHKSLRGPRG---AMIFFRK 269 (356)
Q Consensus 244 ~-~~D~~~~s~~K~l~gp~g---G~l~~~~ 269 (356)
. ++|+++.|++|+++|..| |+++.++
T Consensus 229 ~~g~divv~S~SK~~gG~~glr~G~vv~~~ 258 (427)
T PRK07049 229 EHGADLSVYSLTKYVGGHSDLVAGAVLGRK 258 (427)
T ss_pred ccCCCEEEEcCceeecCCCCcEEEEEECCH
Confidence 2 489999999999986544 8777655
No 255
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.59 E-value=2.1e-14 Score=134.70 Aligned_cols=185 Identities=16% Similarity=0.083 Sum_probs=119.8
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVY 126 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l 126 (356)
+.++|..++++.++.+.+.....+. .|+.. . . .++|+++++++|++++++++++|+++++..+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~y~~~------~-~----~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~ 81 (330)
T TIGR01140 18 DWLDFSTGINPLGPPVPPIPASAWA-----RYPDP------E-Y----DELRAAAAAYYGLPAASVLPVNGAQEAIYLLP 81 (330)
T ss_pred heeEccccCCCCCCChhhcchHHHh-----hCCCc------c-H----HHHHHHHHHHhCCChhhEEECCCHHHHHHHHH
Confidence 4688888888765443332222111 22222 1 1 34568888899998888888988888888654
Q ss_pred HhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 127 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 127 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
. ++.+| .|++.+++|..+.. .....|.++..+ + |++++++.+. ++++++++ |+| +|
T Consensus 82 ~-~l~~g-~vl~~~p~y~~~~~--------~~~~~g~~~~~~--~--------d~~~l~~~~~--~~~~v~i~~p~NPtG 139 (330)
T TIGR01140 82 R-LLAPG-RVLVLAPTYSEYAR--------AWRAAGHEVVEL--P--------DLDRLPAALE--ELDVLVLCNPNNPTG 139 (330)
T ss_pred H-HhCCC-eEEEeCCCcHHHHH--------HHHHcCCEEEEe--C--------CHHHHHhhcc--cCCEEEEeCCCCCCC
Confidence 4 46788 68888866654432 233456555433 2 7888988884 57777776 888 89
Q ss_pred Cccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCC-CCCCccEEEeCCCCcCCCCCc--eEEEEec
Q 018401 205 RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFEYADVVTTTTHKSLRGPRG--AMIFFRK 269 (356)
Q Consensus 205 ~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~-~l~~~D~~~~s~~K~l~gp~g--G~l~~~~ 269 (356)
.+.+ +++|+++|+++|+++|+|+++........+... .....++++.|++|+++.|.- |+++.++
T Consensus 140 ~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~ 210 (330)
T TIGR01140 140 RLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP 210 (330)
T ss_pred CCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCH
Confidence 8888 556778889999999999998532211111110 001256999999998753422 8888877
No 256
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.59 E-value=4.4e-14 Score=134.26 Aligned_cols=164 Identities=13% Similarity=0.019 Sum_probs=113.8
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCC-CeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
.+|+.+++++|+++++|++++|+++++..++.+++.+| |.|+++++.|+ .+.......|.++..+++..+.
T Consensus 63 ~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~--------~~~~~~~~~g~~~~~v~~~~~~ 134 (364)
T PRK04781 63 GLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFG--------MYAVCARLQNAPLVEVPLVDGA 134 (364)
T ss_pred HHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChH--------HHHHHHHHcCCEEEEEecCCCc
Confidence 45688888899999888889888999998999999999 78998885443 2222334567667666432221
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHH--cCCEEEEeccchhhhcccCCCCCCC-C--Ccc
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF-E--YAD 247 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~--~g~~vivD~a~~~g~~~~~~~~~~l-~--~~D 247 (356)
+++.+|++++++.+...++++|+++ ++| ||.+.+.+++.++++. +++++|+|+++.- ... ......+ . .--
T Consensus 135 ~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~-f~~-~~~~~~~~~~~~~v 212 (364)
T PRK04781 135 DGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGE-FSD-VPSAVGLLARYDNL 212 (364)
T ss_pred cCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchh-hcC-CcchHHHHhhCCCE
Confidence 2346789988766543489999997 888 9999998888888764 4789999999742 111 0000000 0 123
Q ss_pred EEEeCCCCcCC--CCCceEEEEec
Q 018401 248 VVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 248 ~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
+++.|++|.++ |.+-|+++.++
T Consensus 213 i~~~SfSK~~gl~GlRvGy~v~~~ 236 (364)
T PRK04781 213 AVLRTLSKAHALAAARIGSLIANA 236 (364)
T ss_pred EEEecChhhcccccceeeeeeCCH
Confidence 88899999764 44449999876
No 257
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.58 E-value=3.1e-14 Score=129.26 Aligned_cols=196 Identities=18% Similarity=0.229 Sum_probs=132.2
Q ss_pred CCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC
Q 018401 54 SENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK 131 (356)
Q Consensus 54 ~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~ 131 (356)
+++. +.|+++++|.++-.. .. .-|+..+.. +++.+++++++|. +.+.|+.|||++|..++.+.++
T Consensus 6 SDn~~g~~~~m~eam~~a~~~-~~------~~YG~D~~~----~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~~ 72 (342)
T COG2008 6 SDNVAGPTPEMREALAAANAV-GD------DVYGEDPTT----NALEQRIAELFGK--EAALFVPSGTQANQLALAAHCQ 72 (342)
T ss_pred cCccCCCCHHHHHHHHhcccc-CC------CCCCCCHHH----HHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHhcC
Confidence 4443 579999999876532 11 223333334 4555889999998 4567799999999999999999
Q ss_pred CCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc------CCcEEEEcCCC-CC
Q 018401 132 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF------RPKLIVAGASA-YA 204 (356)
Q Consensus 132 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~------~~k~v~l~~~n-~g 204 (356)
||+.|++....|......+- +++.+. ...++. ....++.++++++++.+... ++.+++++.++ .|
T Consensus 73 ~~~~vi~~~~aHi~~~E~Ga------~~~~~~-~~~~~~-~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~G 144 (342)
T COG2008 73 PGESVICHETAHIYTDECGA------PEFFGG-GQKLPI-VPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGG 144 (342)
T ss_pred CCCeEEEeccccceecccCc------HHHHcC-Cceecc-CCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCc
Confidence 99999998877755544332 222221 111221 22256899999999977631 23455556444 68
Q ss_pred CcccHH---HHHHHHHHcCCEEEEeccchhhhcc-cCCCCCCC-CCccEEEeCCCCcCCCCCceEEEEecC
Q 018401 205 RLYDYE---RIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKG 270 (356)
Q Consensus 205 ~~~~l~---~I~~la~~~g~~vivD~a~~~g~~~-~~~~~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~~ 270 (356)
++.+++ +|.++||++|+.|+.|+|..+.... .+.....+ .++|+++++++|.++.|.|++++.+.+
T Consensus 145 tVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~ 215 (342)
T COG2008 145 TVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRD 215 (342)
T ss_pred eecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHH
Confidence 887755 6677899999999999997654432 22111111 269999999999988888788888874
No 258
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.58 E-value=9.4e-14 Score=128.60 Aligned_cols=267 Identities=13% Similarity=0.144 Sum_probs=160.3
Q ss_pred HcCCeeecCCCC-----CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchH
Q 018401 46 WKGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSP 120 (356)
Q Consensus 46 ~~~i~L~~~~~~-----~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~ 120 (356)
+++|++.++-.. .+|.+.+++.+.+..-+. .+..|+ .+...++.+.+.+..+ ..+.+.|++||++
T Consensus 42 ~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h---~sn~~~------~~~~~~la~~L~~~s~-~~d~vff~NSGaE 111 (404)
T COG4992 42 REYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH---VSNLFY------NEPQAELAEKLVELSP-FADRVFFCNSGAE 111 (404)
T ss_pred CEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhh---cccccC------ChHHHHHHHHHHhhCc-cccEEEEcCCcHH
Confidence 356887655442 489999999987765331 111122 1233455688888877 5667777999999
Q ss_pred HHHHHHHhhc--C--C-CCeeeecCCCCCcccC-c----ccccccccc--cccceeeEEEecccCCCCCCCCHHHHHHHh
Q 018401 121 SNFQVYTALL--K--P-HDRIMALDLPHGGHLS-H----GYQTDTKKI--SAVSIFFETMPYRLNESTGYIDYDQLEKSA 188 (356)
Q Consensus 121 a~~~~l~al~--~--~-gd~Vl~~~~~~~~~~~-~----~~~~~~~~~--~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i 188 (356)
|+.+++...- . | .-+|+.....|++.-. . +.+-|+... ..-| ++.+ ++ -|++++++++
T Consensus 112 A~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g--~~~v--pf------nDi~al~~ai 181 (404)
T COG4992 112 ANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPG--FRHV--PF------NDIEALEAAI 181 (404)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCC--ceec--CC------CCHHHHHHHh
Confidence 9999887652 2 2 2367766655433211 0 111111111 1111 2122 22 2899999999
Q ss_pred hhcCCcEEEEcCCC--CCCcc----cHHHHHHHHHHcCCEEEEeccchhhhcc-cCCC---CCCCCCccEEEeCCCCcCC
Q 018401 189 TLFRPKLIVAGASA--YARLY----DYERIRKVCNKQKAIMLADMAHISGLVA-AGVI---PSPFEYADVVTTTTHKSLR 258 (356)
Q Consensus 189 ~~~~~k~v~l~~~n--~g~~~----~l~~I~~la~~~g~~vivD~a~~~g~~~-~~~~---~~~l~~~D~~~~s~~K~l~ 258 (356)
++ +|.+|++.|-. .|... -++++.++|++||+++|.|++|+ |.-. ..+. ..+ -..|+++.+ |.|+
T Consensus 182 ~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQt-G~GRTGk~fA~e~~g-V~PDI~tla--K~Lg 256 (404)
T COG4992 182 DE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQT-GLGRTGKLFAYEHYG-VEPDILTLA--KALG 256 (404)
T ss_pred cc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecccc-CCCccchHHHHHHhC-CCCCEEEee--cccc
Confidence 98 89999997544 34333 38899999999999999999995 2111 1110 011 026999988 9997
Q ss_pred CCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHH
Q 018401 259 GPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFV 337 (356)
Q Consensus 259 gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~ 337 (356)
|.-. |+++.++ ...+.+.......++|. |..+.++..++++.+.++.-.++.++..-.....+.
T Consensus 257 GG~PigA~la~~--------------~~~~~~~~G~HgSTfGG-NpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~ 321 (404)
T COG4992 257 GGFPIGAMLATE--------------EIASAFTPGDHGSTFGG-NPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLR 321 (404)
T ss_pred CCccceeeEEch--------------hhhhcCCCCcccCCCCc-CHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHH
Confidence 6444 7777765 33443333322222332 556777777899999987555666655544444444
Q ss_pred hhhccccccccccCC
Q 018401 338 SNQNNSENIEEDKGR 352 (356)
Q Consensus 338 ~~~~~~~~~~~~~~~ 352 (356)
.-+..+..|-+.+||
T Consensus 322 ~l~~~~~~v~~vRG~ 336 (404)
T COG4992 322 ELKRRYPLVKEVRGR 336 (404)
T ss_pred HHhhcCCceeeeecc
Confidence 444444467777765
No 259
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.58 E-value=5e-14 Score=146.10 Aligned_cols=189 Identities=10% Similarity=0.012 Sum_probs=129.9
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCC-CchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCC--
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYG-GNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPH-- 133 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~g-- 133 (356)
+|+.|.+++.+...- + ..|. .|-. -.++..+...+.+..+++++|++++++.++.++|++..++++++ +.+|
T Consensus 117 ~P~~v~~~i~~~~~~-~-Tayt--PYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~ 192 (993)
T PLN02414 117 VPPVILRNILENPGW-Y-TQYT--PYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKK 192 (993)
T ss_pred CCHHHHHHHHhChHH-H-hhcC--CCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCC
Confidence 677777877764431 1 1111 1101 11333344447889999999999999999888887777677666 5654
Q ss_pred CeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCCcccHHHH
Q 018401 134 DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYARLYDYERI 212 (356)
Q Consensus 134 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n~g~~~~l~~I 212 (356)
|+|++++.+|+++..++... ++..|++++.++ .+ . .+ ...+ .+..+++. ++++|.+.|+++|
T Consensus 193 ~~VlVs~~~hP~~~~v~~t~----a~~~GieV~~v~--~~-~---~~------~~~~-~v~~vlvq~P~~~G~v~dv~~I 255 (993)
T PLN02414 193 KKFLIASNCHPQTIDVCQTR----ADGLGLEVVVAD--EK-D---FD------YSSG-DVCGVLVQYPATDGEVLDYAEF 255 (993)
T ss_pred CEEEEcCccCHhHHHHHHHh----hhhcCCEEEEec--ch-h---hc------cccC-ceEEEEEecCCCCeEEcCHHHH
Confidence 78999999998887665422 223465665553 22 1 01 1111 34344555 6669999999999
Q ss_pred HHHHHHcCCEEEEeccchhhhcccC-CCCCCCCCccEEEeCCCCcC-----CCCCceEEEEecCc
Q 018401 213 RKVCNKQKAIMLADMAHISGLVAAG-VIPSPFEYADVVTTTTHKSL-----RGPRGAMIFFRKGV 271 (356)
Q Consensus 213 ~~la~~~g~~vivD~a~~~g~~~~~-~~~~~l~~~D~~~~s~~K~l-----~gp~gG~l~~~~~~ 271 (356)
+++||++|+++++ ++|..+..++. ...++ +|++++++|||+ +||..|++++++++
T Consensus 256 ~~~ah~~GaL~iV-aad~lal~~l~~pge~G---ADi~vgsgqKwg~P~G~GGP~aGflavr~~~ 316 (993)
T PLN02414 256 VKNAHANGVKVVM-ATDLLALTMLKPPGEWG---ADIVVGSAQRFGVPMGYGGPHAAFLATSQEY 316 (993)
T ss_pred HHHHHHcCCEEEE-EECHHHhcCCCCHhhcc---CcEEEECCCccccCCCCCCCCeeEEEECHHH
Confidence 9999999999999 88888877663 44455 999999999997 56666999999875
No 260
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.58 E-value=3.9e-14 Score=138.15 Aligned_cols=175 Identities=16% Similarity=0.153 Sum_probs=129.3
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccc
Q 018401 83 YYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISA 160 (356)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 160 (356)
+|+...+..++++++.+++....|. ++++|++|+|+.+++.++++.+++|||.|++.+|+|.+... ..+.
T Consensus 127 ~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~--------~~~~ 198 (459)
T COG1167 127 QYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQ--------ALEA 198 (459)
T ss_pred cCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH--------HHHH
Confidence 4444467889998888888866676 67788889999999998999999999999999966655443 4556
Q ss_pred cceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc--CCC-CCCcccHH---HHHHHHHHcCCEEEEeccchhhhc
Q 018401 161 VSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--ASA-YARLYDYE---RIRKVCNKQKAIMLADMAHISGLV 234 (356)
Q Consensus 161 ~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~--~~n-~g~~~~l~---~I~~la~~~g~~vivD~a~~~g~~ 234 (356)
.|.++..| ++| +..+|+|.|++.+...++|+++++ .+| +|...+.+ +|.++|++|++++|.|...+.-..
T Consensus 199 ~g~~~~~v--p~d--~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~ 274 (459)
T COG1167 199 LGARVIPV--PVD--EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRY 274 (459)
T ss_pred cCCcEEec--CCC--CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhc
Confidence 67666545 565 346899999999987789999997 445 78777654 899999999999999998643221
Q ss_pred ccCCCCCCCC-----CccEEEeCCCCcCC-CCCceEEEEecC
Q 018401 235 AAGVIPSPFE-----YADVVTTTTHKSLR-GPRGAMIFFRKG 270 (356)
Q Consensus 235 ~~~~~~~~l~-----~~D~~~~s~~K~l~-gp~gG~l~~~~~ 270 (356)
.. ....++. +--++++|++|.+. |.+-|+++..++
T Consensus 275 ~~-~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~ 315 (459)
T COG1167 275 DG-PPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE 315 (459)
T ss_pred CC-CCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHH
Confidence 10 1111111 23489999999874 455599999873
No 261
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.57 E-value=1.3e-13 Score=127.47 Aligned_cols=234 Identities=13% Similarity=0.060 Sum_probs=145.3
Q ss_pred cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCc-hhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC
Q 018401 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGN-EYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK 131 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~ 131 (356)
-+.+..++++++++...+...... .++-.. .....+. .+.+......|+. ...++++.+++..+++.++..
T Consensus 34 lG~s~~~~e~iea~~~~~~~~v~L-----e~~l~~g~~~~R~~-~~~~~~~~~~~ae--a~~ivnnn~aAVll~~~al~~ 105 (395)
T COG1921 34 LGRSLYSPEAIEAMKEAMRAPVEL-----ETDLKTGKRGARLT-ELAELLCGLTGAE--AAAIVNNNAAAVLLTLNALAE 105 (395)
T ss_pred CCCccCCHHHHHHHHHHhccccee-----eeecccchhhHHHH-HHHHHHhcccchh--heeeECCcHHHHHHHHhhhcc
Confidence 356678999999999887653211 111111 1122222 2333333333333 345678888888867777766
Q ss_pred CCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCC--Cccc
Q 018401 132 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYA--RLYD 208 (356)
Q Consensus 132 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n~g--~~~~ 208 (356)
+.+|++... -....+-+.....+..+|++++.+ .. .+.....+++.++.+ ++++++=. .+|+| ...+
T Consensus 106 -~~EvVis~g---~lV~gg~~~v~d~~~~aG~~l~Ev--G~---tn~t~~~d~~~AIne-~ta~llkV~s~~~~f~~~l~ 175 (395)
T COG1921 106 -GKEVVVSRG---ELVEGGAFRVPDIIRLAGAKLVEV--GT---TNRTHLKDYELAINE-NTALLLKVHSSNYGFTGMLS 175 (395)
T ss_pred -CCeEEEEcc---ccccCCCCChhHHHHHcCCEEEEe--cc---cCcCCHHHHHHHhcc-CCeeEEEEeecccccccccc
Confidence 445554321 111112222234677889888666 32 346788999999998 88877655 56666 3447
Q ss_pred HHHHHHHHHHcCCEEEEeccchhhhc-ccCCCCCCCCCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHH
Q 018401 209 YERIRKVCNKQKAIMLADMAHISGLV-AAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEE 287 (356)
Q Consensus 209 l~~I~~la~~~g~~vivD~a~~~g~~-~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~ 287 (356)
+++++++||++|+++++|.+...-.- -.++....-.|+|++++|++|.|+||++|+|+.++ ++.+
T Consensus 176 ~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkK--------------elI~ 241 (395)
T COG1921 176 EEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKK--------------ELIE 241 (395)
T ss_pred HHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCccceEechH--------------HHHH
Confidence 88999999999999999998422110 11111111126999999999999999999999999 5666
Q ss_pred hhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 288 KINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 288 ~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+++...... .=...-..++++.+||+.....
T Consensus 242 ~lq~~~l~R-alrv~K~tla~l~~aLe~y~~~ 272 (395)
T COG1921 242 KLQSHPLKR-ALRVDKETLAALEAALELYLQP 272 (395)
T ss_pred HHHhhhhhh-hhhcCcHhHHHHHHHHHHHcCc
Confidence 665432211 1123346788899999988764
No 262
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.57 E-value=8.6e-14 Score=130.72 Aligned_cols=188 Identities=13% Similarity=0.063 Sum_probs=124.6
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC---CCCCccccCCCchHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR---LDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g---~~~~~v~v~~sgs~a 121 (356)
+.++|..++++ +|+.+++++.+.+.......|+ . .+...++ +.++++++ +++++|++++|++++
T Consensus 20 ~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~------~-~~~~~Lr----~aia~~~~~~~~~~~~i~it~Ga~~~ 88 (335)
T PRK14808 20 DRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYY------D-SPDEELI----EKILSYLDTDFLSKNNVSVGNGADEI 88 (335)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCC------C-CChHHHH----HHHHHHhCCCCCCcceEEEcCCHHHH
Confidence 56899888885 5889999998876532111122 1 1344555 55566655 788888889999999
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
+..++.++ |.|++.+| .|..+...+...|.+++.+ +.+ +++.++... + + ++++++++ |
T Consensus 89 i~~~~~~~----d~v~v~~P--------~y~~~~~~~~~~g~~~~~v--~~~-~~~~~~~~~----~-~-~~~~i~i~nP 147 (335)
T PRK14808 89 IYVMMLMF----DRSVFFPP--------TYSCYRIFAKAVGAKFLEV--PLT-KDLRIPEVN----V-G-EGDVVFIPNP 147 (335)
T ss_pred HHHHHHHh----CcEEECCC--------CHHHHHHHHHHcCCeEEEe--cCC-CcCCCChhH----c-c-CCCEEEEeCC
Confidence 99787776 67998884 4444444566778777655 454 334444322 2 2 56888887 8
Q ss_pred CC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC--CccEEEeCCCCcCC--CCCceEEEEec
Q 018401 201 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 201 ~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~--~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
+| ||...+.+++.+++ +++++||+|+++.- ........ .+. .--+++.|.+|.++ |.+-|+++.++
T Consensus 148 ~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~-f~~~~~~~-~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~ 218 (335)
T PRK14808 148 NNPTGHVFEREEIERIL-KTGAFVALDEAYYE-FHGESYVD-LLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE 218 (335)
T ss_pred CCCCCCCcCHHHHHHHH-hcCCEEEEECchhh-hcCCchHH-HHHhCCCEEEEEechhhccCcccceEEEEeCH
Confidence 88 99999999999998 58999999999642 11100000 000 12478899999875 33339999876
No 263
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.57 E-value=3.3e-14 Score=142.26 Aligned_cols=197 Identities=17% Similarity=0.090 Sum_probs=138.1
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++.+..|+.||++.. +.+++|+|.+|.+++++++.+||.||+....|.|++. ++.+.|+..+.++-..+ .
T Consensus 199 eAe~~aA~~fgAd~t-yfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~--------aLilsga~PVYl~P~~n-~ 268 (713)
T PRK15399 199 EAEEYIARTFGAEQS-YIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAH--------LLMMSDVVPIWLKPTRN-A 268 (713)
T ss_pred HHHHHHHHHhCCCcE-EEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCCeeEEeccccc-c
Confidence 455888999999876 3348888899999999999999999999999988765 55577766655431221 2
Q ss_pred CC---CCCH-----HHHHHHhhhc----CCcEEEEc-CCCCCCcccHHHHHHHHHHcCCEE-EEeccchhhhcccC-CC-
Q 018401 176 TG---YIDY-----DQLEKSATLF----RPKLIVAG-ASAYARLYDYERIRKVCNKQKAIM-LADMAHISGLVAAG-VI- 239 (356)
Q Consensus 176 ~~---~~d~-----~~l~~~i~~~----~~k~v~l~-~~n~g~~~~l~~I~~la~~~g~~v-ivD~a~~~g~~~~~-~~- 239 (356)
.+ .++. +.+++++.++ +++.++++ ++-.|.+.++++|.++| |+.+ ++|+||..-..... ..
T Consensus 269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~ 345 (713)
T PRK15399 269 LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQG 345 (713)
T ss_pred cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCC
Confidence 21 3444 8888888752 23577777 54489999999999998 6766 69999975432212 11
Q ss_pred CCCCC---CccEE---EeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHH
Q 018401 240 PSPFE---YADVV---TTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVA 312 (356)
Q Consensus 240 ~~~l~---~~D~~---~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~A 312 (356)
..++. ++|.+ +.|+||.+.+... ++|.++..+ + .++++....-....+|+++.++++..|
T Consensus 346 ~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~v------------d-~~~~n~a~~m~~STSPsY~LmASLD~a 412 (713)
T PRK15399 346 KSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEY------------D-EETFNEAFMMHTSTSPSYPIVASVETA 412 (713)
T ss_pred cChhhCCCCCCeeeeeeeehhccccccchheeeeecCCC------------C-HHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 12221 46766 9999999998877 777775531 1 223333322223478999999999999
Q ss_pred HHHHhc
Q 018401 313 LKQVCT 318 (356)
Q Consensus 313 l~~~~~ 318 (356)
..++..
T Consensus 413 ~~~m~~ 418 (713)
T PRK15399 413 AAMLRG 418 (713)
T ss_pred HHHHHh
Confidence 999975
No 264
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.57 E-value=1e-14 Score=145.85 Aligned_cols=199 Identities=16% Similarity=0.072 Sum_probs=140.2
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++.+..|+.||++.. +.+++|+|.+|.+++++++.+||.||+....|.|++. ++.+.|+..+.++-..+ .
T Consensus 199 eAe~~AA~~fgAd~t-yfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~h--------aLilsga~PVYl~P~rn-~ 268 (714)
T PRK15400 199 EAEEYIARVFNADRS-YMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTH--------LMMMSDVTPIYFRPTRN-A 268 (714)
T ss_pred HHHHHHHHHhCCCcE-EEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCCeEEEeccccc-c
Confidence 456889999999876 3348888899999999999999999999999988765 55577766655432221 2
Q ss_pred C---CCCC-----HHHHHHHhhhc-CCc---EEEEc-CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCC--C
Q 018401 176 T---GYID-----YDQLEKSATLF-RPK---LIVAG-ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI--P 240 (356)
Q Consensus 176 ~---~~~d-----~~~l~~~i~~~-~~k---~v~l~-~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~--~ 240 (356)
. +.++ .+.+++++.++ +.+ .++++ ++-.|.+.++++|.++|+.++ +++|+||..-....... .
T Consensus 269 ~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~ 346 (714)
T PRK15400 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGK 346 (714)
T ss_pred cCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCc
Confidence 1 1334 88999998752 223 66776 544899999999999999887 69999997543222221 2
Q ss_pred CCC-CCc---c--EEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHH
Q 018401 241 SPF-EYA---D--VVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVAL 313 (356)
Q Consensus 241 ~~l-~~~---D--~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al 313 (356)
.++ .++ | +++.|+||.+.+... ++|.++..+ + .++++....-....+|+++.++++..|.
T Consensus 347 sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~v------------d-~~~~n~a~~m~~STSPsY~l~ASLD~a~ 413 (714)
T PRK15400 347 CGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDV------------N-EETFNEAYMMHTTTSPHYGIVASTETAA 413 (714)
T ss_pred ChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCC------------C-HHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 333 245 5 999999999988766 666564421 1 2333333222334789999999999999
Q ss_pred HHHhcc
Q 018401 314 KQVCTL 319 (356)
Q Consensus 314 ~~~~~~ 319 (356)
.++..+
T Consensus 414 ~~m~~~ 419 (714)
T PRK15400 414 AMMKGN 419 (714)
T ss_pred HHHHhh
Confidence 998753
No 265
>PRK08354 putative aminotransferase; Provisional
Probab=99.56 E-value=8.9e-14 Score=129.33 Aligned_cols=180 Identities=12% Similarity=0.033 Sum_probs=119.4
Q ss_pred cCCeeecCCCCC-cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHH
Q 018401 47 KGLELIPSENFT-SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 47 ~~i~L~~~~~~~-~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~ 125 (356)
+.|+|..++|+. |+.+.+++.+.+.. . .+||. .. .+++++++++|. ++++|+|+++++..+
T Consensus 9 ~~i~l~~~~np~~p~~~~~a~~~~~~~-~-~~yp~---------~~----~l~~~ia~~~~~---~I~vt~G~~~al~~~ 70 (311)
T PRK08354 9 GLIDFSASVNPYPPEWLDEMFERAKEI-S-GRYTY---------YE----WLEEEFSKLFGE---PIVITAGITEALYLI 70 (311)
T ss_pred ceeEecCCCCCCCCHHHHHHHHHHHHH-h-hcCCC---------hH----HHHHHHHHHHCC---CEEECCCHHHHHHHH
Confidence 468898888875 67788888776543 1 13331 12 345888888883 567788889988856
Q ss_pred HHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-C
Q 018401 126 YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-Y 203 (356)
Q Consensus 126 l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~ 203 (356)
+ .++.+||.|++++|+|..+. ..+...|.++..+ .+|++.+++.+. ++++++++ |+| |
T Consensus 71 ~-~~~~~gd~vlv~~P~y~~~~--------~~~~~~g~~~~~~---------~~d~~~l~~~~~--~~~~vi~~~P~NPT 130 (311)
T PRK08354 71 G-ILALRDRKVIIPRHTYGEYE--------RVARFFAARIIKG---------PNDPEKLEELVE--RNSVVFFCNPNNPD 130 (311)
T ss_pred H-HhhCCCCeEEEeCCCcHHHH--------HHHHHcCCEEeec---------CCCHHHHHHhhc--CCCEEEEecCCCCC
Confidence 5 44459999999996665443 3445566555222 357888888775 45677776 888 8
Q ss_pred CCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCC--CCCceEEEE
Q 018401 204 ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR--GPRGAMIFF 267 (356)
Q Consensus 204 g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~--gp~gG~l~~ 267 (356)
|...+ +++|.++|+++|+++|+|+++.- ....+. ... ..--+++.|.+|+++ |-+-|+++.
T Consensus 131 G~~~~~~~l~~l~~~a~~~~~~li~De~y~~-f~~~~~-~~~-~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 131 GKFYNFKELKPLLDAVEDRNALLILDEAFID-FVKKPE-SPE-GENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred CCccCHHHHHHHHHHhhhcCcEEEEeCcchh-cccccc-ccC-CCcEEEEeccHhhcCCccceeeeeee
Confidence 97776 55667778899999999999742 121111 001 113588899999774 333488886
No 266
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.55 E-value=2.8e-13 Score=129.94 Aligned_cols=224 Identities=12% Similarity=0.092 Sum_probs=132.3
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh----cCCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL----LKPH 133 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al----~~~g 133 (356)
-+|.|.+++.+.+..... . +. .+ .++ ...++.++++++.+. +++.+++||++++..+++++ ..+|
T Consensus 48 ~~p~v~~a~~~~~~~~~~--~-~~-~~-~~~----~~~~la~~l~~~~~~--~~v~~~~sGseA~~~al~~ar~~~~~~G 116 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWH--V-SN-LY-RIP----EQERLAERLVENSFA--DKVFFTNSGAEAVECAIKTARRYHYGKG 116 (389)
T ss_pred CCHHHHHHHHHHHHhcCc--c-cc-cc-CCh----HHHHHHHHHHhhCCC--CEEEEcCCcHHHHHHHHHHHHHHHHhcC
Confidence 489999999998875221 1 11 11 112 223455777776643 46777999999999888765 4567
Q ss_pred C----eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCC----CCCHHHHHHHhhhcCCcEEEEcCCC--C
Q 018401 134 D----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG----YIDYDQLEKSATLFRPKLIVAGASA--Y 203 (356)
Q Consensus 134 d----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~----~~d~~~l~~~i~~~~~k~v~l~~~n--~ 203 (356)
| +|++.+..|++................+ + . +.. ++. ..|++++++++++ ++++|+++|.+ +
T Consensus 117 ~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~--~--~--~~~-~~~~~~~~~d~~~l~~~l~~-~~~avivep~~~~~ 188 (389)
T PRK01278 117 HPERYRIITFEGAFHGRTLATIAAGGQEKYLEG--F--G--PLV-PGFDQVPFGDIEALKAAITP-NTAAILIEPIQGEG 188 (389)
T ss_pred CCCCCEEEEECCCcCCCcHHHHhccCChhhccc--C--C--CCC-CCceEeCCCCHHHHHHhhCC-CeEEEEEecccCCC
Confidence 6 8998886665553222211000000000 0 0 000 111 2589999999976 89999998544 4
Q ss_pred C-Cc---ccHHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCCcCCC-CCceEEEEecCcchh
Q 018401 204 A-RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRG-PRGAMIFFRKGVKEI 274 (356)
Q Consensus 204 g-~~---~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K~l~g-p~gG~l~~~~~~~~~ 274 (356)
| .. ..+++|.++|++||+++|+|++|+ |....+. ...++ ..|++++| |.+++ .+.|+++.++
T Consensus 189 G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~-~pdi~t~s--K~l~~G~~ig~~~~~~----- 259 (389)
T PRK01278 189 GIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGV-TPDIMAVA--KGIGGGFPLGACLATE----- 259 (389)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCC-CCCEEEEe--hhccCCcceEEEEEcH-----
Confidence 5 22 368899999999999999999986 3211110 01111 25776654 98853 3347888776
Q ss_pred ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 275 NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
++.+.+........+ +.+.+..++..++++.+.++
T Consensus 260 ---------~~~~~~~~~~~~~t~-~~~~~~~aaa~a~l~~l~~~ 294 (389)
T PRK01278 260 ---------EAAKGMTPGTHGSTY-GGNPLAMAVGNAVLDVILAP 294 (389)
T ss_pred ---------HHHhccCCCCCCCCC-CccHHHHHHHHHHHHHHhhh
Confidence 444444332222222 34566677777889887543
No 267
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.55 E-value=2.3e-13 Score=129.96 Aligned_cols=233 Identities=13% Similarity=0.104 Sum_probs=139.0
Q ss_pred cCCeeecC--CC---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPS--EN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~--~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
+.|++..+ .+ ..+|.|.+++.+.+.... .... .|. .+...++++++++++|.+ ++++++||+++
T Consensus 28 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~-~~~-----~~~~~~l~~~la~~~g~~--~~~~~~sg~~a 96 (379)
T TIGR00707 28 EYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLV---HVSN-LYY-----TEPQEELAEKLVEHSGAD--RVFFCNSGAEA 96 (379)
T ss_pred EEEEcCcchhhccCCCCCHHHHHHHHHHHhhcc---cccc-ccC-----CHHHHHHHHHHHhhCCCC--EEEEeCCcHHH
Confidence 45676553 23 346899999999887521 1111 111 234455668999999876 56678999999
Q ss_pred HHHHHHhh---cC----CCCeeeecCCCCCcccCcccccccccccccceeeEE--EecccCCCC-C--CCCHHHHHHHhh
Q 018401 122 NFQVYTAL---LK----PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET--MPYRLNEST-G--YIDYDQLEKSAT 189 (356)
Q Consensus 122 ~~~~l~al---~~----~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--v~~~~~~~~-~--~~d~~~l~~~i~ 189 (356)
+..++.++ .. +||+|+++++.|.++..... ..+..... ...+...+. . ..|++++++.++
T Consensus 97 ~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~ 168 (379)
T TIGR00707 97 NEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGAL--------SATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID 168 (379)
T ss_pred HHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHH--------HhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh
Confidence 98777754 22 47999998876644322111 01100000 000111010 1 128999999988
Q ss_pred hcCCcEEEEcCCC--CCCc-c---cHHHHHHHHHHcCCEEEEeccchhhhcccC--C--CCCCCCCccEEEeCCCCcCCC
Q 018401 190 LFRPKLIVAGASA--YARL-Y---DYERIRKVCNKQKAIMLADMAHISGLVAAG--V--IPSPFEYADVVTTTTHKSLRG 259 (356)
Q Consensus 190 ~~~~k~v~l~~~n--~g~~-~---~l~~I~~la~~~g~~vivD~a~~~g~~~~~--~--~~~~l~~~D~~~~s~~K~l~g 259 (356)
+ ++++|+++++| +|.. . ++++|.++|+++|+++|+|++|+ +....+ . ...+ ...|++++ +|++++
T Consensus 169 ~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~~~~~~~-~~~d~~t~--sK~~~~ 243 (379)
T TIGR00707 169 D-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFFAYEHYG-IEPDIITL--AKGLGG 243 (379)
T ss_pred h-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhhHHhcC-CCCCEEEE--cccccC
Confidence 7 78999998444 3432 2 48899999999999999999985 221111 0 0111 12577655 599874
Q ss_pred CC-ceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 260 PR-GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 260 p~-gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
+. .|+++.++ ++.+.+........+ +.+.+..+++.++|+.+..
T Consensus 244 G~riG~~~~~~--------------~~~~~~~~~~~~~~~-~~~~~~~~aa~aaL~~~~~ 288 (379)
T TIGR00707 244 GVPIGATLAKE--------------EVAEAFTPGDHGSTF-GGNPLACAAALAVLEVIEK 288 (379)
T ss_pred CcccEEEEEcH--------------HHHhhhcCCCCCCCC-CCCHHHHHHHHHHHHHHHh
Confidence 33 38888876 455555432211222 3466778888888887754
No 268
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.54 E-value=4.7e-13 Score=128.85 Aligned_cols=222 Identities=13% Similarity=0.079 Sum_probs=133.3
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC-------
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK------- 131 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~------- 131 (356)
+|+|.+++.+.+.. +..... .+ .+... .++.+.++++++.+ .+++++||++|+..++..+..
T Consensus 59 ~~~i~~a~~~~~~~-~~~~~~---~~-~~~~~----~~l~~~l~~~~~~~--~~~~~~SGs~A~e~al~~a~~~~~~~~g 127 (401)
T PRK00854 59 HPKILAAMVEQAGR-LTLTSR---AF-RNDQL----APLYEELAALTGSH--KVLPMNSGAEAVETAIKAVRKWGYEVKG 127 (401)
T ss_pred CHHHHHHHHHHHhh-cccccc---cc-CCHHH----HHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHHHhccC
Confidence 89999999998876 211111 11 12223 34447788888754 566799999999988887632
Q ss_pred --CC-CeeeecCCCCCcccCcccccc-----cccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 132 --PH-DRIMALDLPHGGHLSHGYQTD-----TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 132 --~g-d~Vl~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
+| ++|++....|.+........- +.........+..+ + ..|++++++++.+ ++++|+++ +.|
T Consensus 128 ~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~d~~~le~~i~~-~~~aii~e~~~~ 198 (401)
T PRK00854 128 VPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVV--P------FGDAEALEAAITP-NTVAFLVEPIQG 198 (401)
T ss_pred CCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEe--C------CCCHHHHHHHhCC-CeEEEEEccccC
Confidence 23 677777654433221111000 00000000111112 1 2378999999986 89999998 545
Q ss_pred -CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccCC--CCCCCCCccEEEeCCCCcCCCC--CceEEEEecCcc
Q 018401 203 -YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVK 272 (356)
Q Consensus 203 -~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~~--~~~~l~~~D~~~~s~~K~l~gp--~gG~l~~~~~~~ 272 (356)
+|.+.| +++|+++|++||+++|+|++|+ +|..+... ...+. ..|+++++ |+|+|. +.|+++.++
T Consensus 199 ~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~-~~D~~~~~--K~l~gg~~~ig~v~~~~--- 272 (401)
T PRK00854 199 EAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGI-EADVTLIG--KALSGGFYPVSAVLSNS--- 272 (401)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCC-CCCEEEec--ccccCCccCeEEEEEcH---
Confidence 787665 9999999999999999999997 43322111 11111 26888875 999654 347788777
Q ss_pred hhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 273 EINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++.+.+........++ .+....++..++|+.+.+
T Consensus 273 -----------~~~~~l~~~~~~~t~~-~~~~~~aa~~a~L~~l~~ 306 (401)
T PRK00854 273 -----------EVLGVLKPGQHGSTFG-GNPLACAVARAALKVLTE 306 (401)
T ss_pred -----------HHHhcccCCCCCCCCC-cCHHHHHHHHHHHHHHHH
Confidence 4444443221112233 356667777788988765
No 269
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.54 E-value=1e-13 Score=130.27 Aligned_cols=161 Identities=20% Similarity=0.170 Sum_probs=114.7
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeE
Q 018401 87 NEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 166 (356)
Q Consensus 87 ~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 166 (356)
++..+.++ +.++.+-|.+.. +.++||.+|+..++.+++++||+|++++..|++.+...... ....|+++.
T Consensus 62 nPT~~~lE----~~~a~LEg~~~~--~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~----l~~~gi~~~ 131 (396)
T COG0626 62 NPTRDALE----EALAELEGGEDA--FAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKI----LQKFGVEVT 131 (396)
T ss_pred CccHHHHH----HHHHHhhCCCcE--EEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHH----HHhcCeEEE
Confidence 34455665 777777776654 34899999999889999999999999987666554322211 122344343
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC
Q 018401 167 TMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE 244 (356)
Q Consensus 167 ~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~ 244 (356)
.+ +. -+.+.+++++.+++||+|++. |+| +-.+.|+.+|+++|+++|+++++|.+.+.+... .|+.
T Consensus 132 ~~--d~------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q-----~PL~ 198 (396)
T COG0626 132 FV--DP------GDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQ-----RPLE 198 (396)
T ss_pred EE--CC------CChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccccccc-----Chhh
Confidence 22 21 245566666663489999997 888 679999999999999999999999996554432 3333
Q ss_pred -CccEEEeCCCCcCCCCCc---eEEEEecC
Q 018401 245 -YADVVTTTTHKSLRGPRG---AMIFFRKG 270 (356)
Q Consensus 245 -~~D~~~~s~~K~l~gp~g---G~l~~~~~ 270 (356)
|+|+++-|.+|+++|--. |+++.+++
T Consensus 199 ~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~ 228 (396)
T COG0626 199 LGADIVVHSATKYLGGHSDVLGGVVLTPNE 228 (396)
T ss_pred cCCCEEEEeccccccCCcceeeeEEecChH
Confidence 599999999999988544 65555553
No 270
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.53 E-value=4.5e-13 Score=128.86 Aligned_cols=232 Identities=13% Similarity=0.078 Sum_probs=136.5
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchHHHHHHHHhhcCCC-Ce
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSPSNFQVYTALLKPH-DR 135 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~a~~~~l~al~~~g-d~ 135 (356)
.+|.+.+++.+.+.... .... .|.. ....++.++++++++.+ ++++.+++||++++..+++.+..+| +.
T Consensus 60 ~~p~v~~ai~~~~~~~~---~~~~-~~~~-----~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ 130 (398)
T PRK03244 60 AHPAVVEAVTRQLATLG---HVSN-LFAT-----EPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTK 130 (398)
T ss_pred CCHHHHHHHHHHHHhcc---CccC-ccCC-----HHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCe
Confidence 37999999999887521 1111 1221 11235668889988864 4677779999999998888765566 45
Q ss_pred eeecCCCCCcccCcccccc-----cccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc
Q 018401 136 IMALDLPHGGHLSHGYQTD-----TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD 208 (356)
Q Consensus 136 Vl~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~ 208 (356)
|+..+..|.+......... .......+..+..+ +. .|++.+++.+.+ ++++|+++ ..| +|.+.|
T Consensus 131 ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~d~~~l~~~~~~-~~~aviiep~~~~~G~~~~ 201 (398)
T PRK03244 131 IVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHV--PY------GDVDALAAAVDD-DTAAVFLEPIQGEAGVVPP 201 (398)
T ss_pred EEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEe--CC------CCHHHHHHhhcC-CeEEEEEecccCCCCCcCC
Confidence 6666545544321111000 00000001111111 11 378999988865 78899888 434 787766
Q ss_pred ----HHHHHHHHHHcCCEEEEeccchhhhcccC----CCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCc
Q 018401 209 ----YERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGK 279 (356)
Q Consensus 209 ----l~~I~~la~~~g~~vivD~a~~~g~~~~~----~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~ 279 (356)
+++|.++|++||+++|+|++|+ |.-..+ ....++ ..|++++| |+|+++-. |+++.++
T Consensus 202 ~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~-~pDi~t~s--K~l~~G~~ig~~~~~~---------- 267 (398)
T PRK03244 202 PAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGV-TPDVVTLA--KGLGGGLPIGACLAFG---------- 267 (398)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecccc-CCcccchHHhhhhhCC-CCCEEEEc--hhhhCCcccEEEEEcH----------
Confidence 8899999999999999999985 321111 011111 26888775 99975333 7777776
Q ss_pred chhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 280 EVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
++.+.+........++ .+.+..++..++|+.+.++...++.+
T Consensus 268 ----~~~~~~~~~~~~~t~~-~~~~~~aaa~a~l~~~~~~~~~~~~~ 309 (398)
T PRK03244 268 ----PAADLLTPGLHGSTFG-GNPVACAAALAVLDTIASEGLLENAE 309 (398)
T ss_pred ----HHHhhccCCCCcCCCC-CCHHHHHHHHHHHHHHHhccHHHHHH
Confidence 4555544322222333 44566777778888776543233444
No 271
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.53 E-value=4.5e-14 Score=133.89 Aligned_cols=159 Identities=23% Similarity=0.212 Sum_probs=110.7
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeE
Q 018401 87 NEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 166 (356)
Q Consensus 87 ~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 166 (356)
++....++ +.++++.|.+. .++++||.+|+.+++.+++++||+|+++..-|++...... ......|+.+.
T Consensus 54 nPt~~~le----~~la~Le~g~~--a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~----~~l~~~gv~v~ 123 (386)
T PF01053_consen 54 NPTVRALE----QRLAALEGGED--ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLE----ELLPRFGVEVT 123 (386)
T ss_dssp -HHHHHHH----HHHHHHHT-SE--EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHH----HCHHHTTSEEE
T ss_pred cccHHHHH----HHHHHhhcccc--eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhh----hhhcccCcEEE
Confidence 34445554 78888888754 3458999999988999999999999999866655432211 11222354443
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcC-CEEEEeccchhhhcccCCCCCCC
Q 018401 167 TMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIPSPF 243 (356)
Q Consensus 167 ~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g-~~vivD~a~~~g~~~~~~~~~~l 243 (356)
.+ +. -|++++++++++ ++++|++. |+| +..+.|+++|+++|+++| +++++|.+.+.+.. . .|+
T Consensus 124 ~~--d~------~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~---~--~pL 189 (386)
T PF01053_consen 124 FV--DP------TDLEALEAALRP-NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYN---Q--NPL 189 (386)
T ss_dssp EE--ST------TSHHHHHHHHCT-TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTT---C---GG
T ss_pred Ee--Cc------hhHHHHHhhccc-cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceee---e--ccC
Confidence 33 22 389999999998 89999997 877 678999999999999998 99999999655422 1 233
Q ss_pred C-CccEEEeCCCCcCCCCC---ceEEEEec
Q 018401 244 E-YADVVTTTTHKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 244 ~-~~D~~~~s~~K~l~gp~---gG~l~~~~ 269 (356)
. |+|+++.|.+|+++|.. ||++++++
T Consensus 190 ~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~ 219 (386)
T PF01053_consen 190 ELGADIVVHSATKYLSGHSDVMGGAVVVNG 219 (386)
T ss_dssp GGT-SEEEEETTTTTTTSSSE-EEEEEESS
T ss_pred cCCceEEEeeccccccCCcceeeEEEEECc
Confidence 3 49999999999998876 37777765
No 272
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.53 E-value=9.1e-14 Score=125.89 Aligned_cols=158 Identities=17% Similarity=0.148 Sum_probs=117.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEE
Q 018401 88 EYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 167 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 167 (356)
+..+.+| ++++.+-|--.. +-+.||.+|...++..++++||+|+..+.-|++.+...... ....|++++.
T Consensus 62 PT~~vlE----~RiAaLEGG~aa--~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~t----l~~~Gi~v~f 131 (426)
T COG2873 62 PTTDVLE----ERIAALEGGVAA--LAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHT----LKRLGIEVRF 131 (426)
T ss_pred chHHHHH----HHHHHhhcchhh--hhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHH----HHhcCcEEEE
Confidence 3455565 788887776544 23889999999999999999999999998888776433222 2234655554
Q ss_pred EecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC-
Q 018401 168 MPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE- 244 (356)
Q Consensus 168 v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~- 244 (356)
+ +. .|++.+++++++ +||+|++. -.| -+.+.|+++|+++||++|+++|+|.+-+.+.. . .|++
T Consensus 132 v--d~------~d~~~~~~aI~~-nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl-~----rP~~h 197 (426)
T COG2873 132 V--DP------DDPENFEAAIDE-NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYL-C----RPIEH 197 (426)
T ss_pred e--CC------CCHHHHHHHhCc-ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCccee-c----chhhc
Confidence 4 22 379999999998 99999996 556 56899999999999999999999998544422 1 2333
Q ss_pred CccEEEeCCCCcCCCCCc--eEEEEec
Q 018401 245 YADVVTTTTHKSLRGPRG--AMIFFRK 269 (356)
Q Consensus 245 ~~D~~~~s~~K~l~gp~g--G~l~~~~ 269 (356)
|+|+++-|.+||++|-.. |.+++..
T Consensus 198 GADIVvHS~TK~igGhGt~iGG~iVD~ 224 (426)
T COG2873 198 GADIVVHSATKYIGGHGTAIGGVIVDG 224 (426)
T ss_pred CCCEEEEeecccccCCccccceEEEeC
Confidence 599999999999977433 5555554
No 273
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.53 E-value=9.2e-13 Score=125.35 Aligned_cols=279 Identities=14% Similarity=0.058 Sum_probs=161.8
Q ss_pred cCCeeecCCCC-----CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchH
Q 018401 47 KGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSP 120 (356)
Q Consensus 47 ~~i~L~~~~~~-----~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~ 120 (356)
..|++.++-+. .+|.|++++.+.+.... ....++.. + +...++.+++.+.+..+ ...+.|++||++
T Consensus 57 ~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~---h~~~~~~~-~----e~~v~~ae~L~~~~p~~~~~~~~f~~sGae 128 (447)
T COG0160 57 EYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLN---HTHTRDLY-Y----EPYVELAEKLTALAPGSGLKKVFFGNSGAE 128 (447)
T ss_pred EEEEcccCcchhccCCCCHHHHHHHHHHHHHhh---cccCCccc-c----hhHHHHHHHHHHhCCcccCCeEEecCCcHH
Confidence 45666654332 48999999999876521 11111111 1 22233446777766653 445566999999
Q ss_pred HHHHHHHhh--cCCCCeeeecCCCCCcc-cCcc-----cccccccccccceeeEEEecccCCCC---------CCCCHHH
Q 018401 121 SNFQVYTAL--LKPHDRIMALDLPHGGH-LSHG-----YQTDTKKISAVSIFFETMPYRLNEST---------GYIDYDQ 183 (356)
Q Consensus 121 a~~~~l~al--~~~gd~Vl~~~~~~~~~-~~~~-----~~~~~~~~~~~g~~~~~v~~~~~~~~---------~~~d~~~ 183 (356)
|+.+++... ...+..||.....|++. .... ...++.+.......+..+|++..... .....+.
T Consensus 129 A~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~ 208 (447)
T COG0160 129 AVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEY 208 (447)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHH
Confidence 999888754 34456677766554332 2111 01111111111111344555432111 0112344
Q ss_pred HHHHhhh-----cCCcEEEEcCC--CCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcc--cCCCCCCCCCccEE
Q 018401 184 LEKSATL-----FRPKLIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVA--AGVIPSPFEYADVV 249 (356)
Q Consensus 184 l~~~i~~-----~~~k~v~l~~~--n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~--~~~~~~~l~~~D~~ 249 (356)
+++.+.+ .++.++++.|- ..|.+.+ ++++.++|++||+++|+|++|+ +|-.. ......+. ..|++
T Consensus 209 ~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv-~PDiv 287 (447)
T COG0160 209 IERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIV 287 (447)
T ss_pred HHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCC-CCCEE
Confidence 5554432 13567777633 2453333 8899999999999999999995 22111 01111111 37999
Q ss_pred EeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcc
Q 018401 250 TTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVF 328 (356)
Q Consensus 250 ~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~ 328 (356)
+++ |.+++.-. |+++.++ ++.+ +......++++. |....++..+.|+.+.++.-.++.++.
T Consensus 288 t~a--K~ig~G~Pl~avv~r~--------------ei~~-~~~g~~~~Tf~G-Npva~Aaa~AvL~vie~e~L~~~a~~~ 349 (447)
T COG0160 288 TLA--KSLGGGLPLSAVVGRA--------------EIMD-WPPGGHGGTFGG-NPVACAAALAVLDVIEEENLLERAAEL 349 (447)
T ss_pred Eec--ccccCCCceeEEeccH--------------Hhcc-cCCcccCCCCCc-CHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 999 99976333 8888887 4444 333323333433 445566666889999887556677777
Q ss_pred cccchHHHHhhhccccccccccCC
Q 018401 329 SLHVYPAFVSNQNNSENIEEDKGR 352 (356)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~ 352 (356)
.-.+...+...|.....|+|.+||
T Consensus 350 G~~l~~~L~~l~~~~~~IgdVRG~ 373 (447)
T COG0160 350 GEYLRDRLEELQEKHPLIGDVRGL 373 (447)
T ss_pred HHHHHHHHHHHHhhcCceeccccc
Confidence 777778888889999999999986
No 274
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.52 E-value=8.2e-13 Score=126.95 Aligned_cols=242 Identities=14% Similarity=0.111 Sum_probs=136.5
Q ss_pred cCCeeecC--CC---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPS--EN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~--~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
+.|++..+ .+ .-+|+|.+++.+.+...+. .+.. + .+ +...++.+.++++++. +.+.|++||+++
T Consensus 36 ~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~---~~~~-~-~~----~~~~~la~~L~~~~~~--~~~~f~~SGseA 104 (397)
T TIGR03246 36 EYIDFAGGIAVNALGHAHPELVKALIEQADKLWH---IGNG-Y-TN----EPVLRLAKKLVDATFA--DKVFFCNSGAEA 104 (397)
T ss_pred EEEECCcCHhhccCCCCCHHHHHHHHHHHHhccc---ccCc-c-CC----HHHHHHHHHHHhhCCC--CEEEEeCCcHHH
Confidence 45666543 12 2489999999998875221 1110 1 11 2233455788887764 356679999999
Q ss_pred HHHHHHhhc--------CCCCeeeecCC-CCCcccCccccc----ccccccccceeeEEEecccCCCCCCCCHHHHHHHh
Q 018401 122 NFQVYTALL--------KPHDRIMALDL-PHGGHLSHGYQT----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 188 (356)
Q Consensus 122 ~~~~l~al~--------~~gd~Vl~~~~-~~~~~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i 188 (356)
+..++.... ...++|+..+. -|+.+....... ++....-....+..+ + ..|++++++.+
T Consensus 105 ~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~d~~~l~~~l 176 (397)
T TIGR03246 105 NEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHA--P------YNDLAAAKALI 176 (397)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEe--C------CCCHHHHHHHh
Confidence 998887651 12355666553 344432111000 000000000011111 1 13789999998
Q ss_pred hhcCCcEEEEcCCC--CCC----cccHHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCCcCC
Q 018401 189 TLFRPKLIVAGASA--YAR----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLR 258 (356)
Q Consensus 189 ~~~~~k~v~l~~~n--~g~----~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K~l~ 258 (356)
.+ ++++|++.|.+ .|. ...+++|.++|++||+++|+|++| .|.-..+. ...+. .+|++++| |.++
T Consensus 177 ~~-~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv-~pDi~t~~--K~lg 251 (397)
T TIGR03246 177 SD-KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGV-TPDILTSA--KALG 251 (397)
T ss_pred cc-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchhhhhcCC-CCCEEEee--hhhh
Confidence 76 78899988544 343 335999999999999999999998 44311111 11111 36888665 9985
Q ss_pred C-CCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 259 G-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 259 g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
| -+-|+++.++ ++.+.+........++ .+.+..++..++++.+.++...++.++
T Consensus 252 gG~pigav~~~~--------------~i~~~~~~~~~~~t~~-~~p~~~aaa~a~l~~~~~~~l~~~~~~ 306 (397)
T TIGR03246 252 GGFPIGAMLTTT--------------EIAAHLKVGTHGTTYG-GNPLACAVAGKVLDLVNTPELLAGVKQ 306 (397)
T ss_pred CCcceeEEEEcH--------------HHHHhccCCCcCCCCC-CCHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 3 2337777776 4555554322222333 344567777788988765433344443
No 275
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.52 E-value=5.5e-14 Score=123.52 Aligned_cols=191 Identities=19% Similarity=0.230 Sum_probs=131.7
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-CCCCee
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL-KPHDRI 136 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~-~~gd~V 136 (356)
+..+.+++|.++.... ..|+.......|| +.+|+++|-++. .|..|||.+|.++++.-+ ++|.+|
T Consensus 34 PTdeMr~am~eA~vgD--------dVyGeD~tt~rLE----~~vA~l~GKEAg--LFv~SGTmgNllaIm~Hc~~rg~ei 99 (384)
T KOG1368|consen 34 PTDEMRRAMAEASVGD--------DVYGEDPTTNRLE----QRVAELFGKEAG--LFVPSGTMGNLLAIMVHCHQRGSEI 99 (384)
T ss_pred ChHHHHHHHhhcccCc--------ccccCCccHHHHH----HHHHHHhCccce--eeecccccccHHHHHHHhcCCCceE
Confidence 4577888887765432 2233333455566 888999998887 677788888888888775 599999
Q ss_pred eecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc-------CCcEEEEc-CCC-CC-Cc
Q 018401 137 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-------RPKLIVAG-ASA-YA-RL 206 (356)
Q Consensus 137 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~-------~~k~v~l~-~~n-~g-~~ 206 (356)
++.+..|--.+..+- ...+.|+.++.+ ... +++.+|++++++++..+ -|++|.+. .+| .| .+
T Consensus 100 i~gd~~HI~~~E~gg-----~s~l~gv~~~tv--~~e-~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~v 171 (384)
T KOG1368|consen 100 IVGDRAHIHRYEQGG-----ISQLAGVHVRTV--KNE-NDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKV 171 (384)
T ss_pred EeccchheeehhccC-----hhhhccceeEee--eeC-CCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceE
Confidence 998876654433222 233556445444 333 56799999999998632 27888886 444 45 77
Q ss_pred ccHH---HHHHHHHHcCCEEEEeccchhhhc-ccCCCCCCC-CCccEEEeCCCCcCCCCCceEEEEecC
Q 018401 207 YDYE---RIRKVCNKQKAIMLADMAHISGLV-AAGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKG 270 (356)
Q Consensus 207 ~~l~---~I~~la~~~g~~vivD~a~~~g~~-~~~~~~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~~ 270 (356)
.|++ +|.++|++||+.++.|+|....+. ..++.-..+ ..+|.+..+.+|.|++|-|.+++.+++
T Consensus 172 lPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k~ 240 (384)
T KOG1368|consen 172 LPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVGSVIVGSKD 240 (384)
T ss_pred eeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcccEEEccHH
Confidence 7766 567889999999999998754432 122211000 147999999999999999999998884
No 276
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.52 E-value=2.8e-13 Score=141.09 Aligned_cols=163 Identities=12% Similarity=0.014 Sum_probs=119.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCC--CeeeecCCCCCcccCcccccccccccccceee
Q 018401 89 YIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPH--DRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 165 (356)
Q Consensus 89 ~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~g--d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 165 (356)
+.-+..-+.+..++++.|++..++.+..++|++..++++++ ++++ |+|++++.+|+++..++.. .++..|.++
T Consensus 118 G~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t----~a~~~G~ev 193 (954)
T PRK05367 118 GRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRT----RAEPLGIEV 193 (954)
T ss_pred HHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHH----HHHhCCCEE
Confidence 33344446889999999999988888888887777677776 5664 9999999999887765442 123356666
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC
Q 018401 166 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE 244 (356)
Q Consensus 166 ~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~ 244 (356)
+.++ .+ + |++ .+ ++..+++. ++++|.+.|+++|+++||++|+++++|+.|.+..........+
T Consensus 194 ~~~~--~~-~----d~~------~~-~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~G-- 257 (954)
T PRK05367 194 VVGD--AA-K----ALD------HD-DVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMG-- 257 (954)
T ss_pred EEec--Cc-c----CCC------cc-cEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcC--
Confidence 6663 32 1 111 12 45556666 5558999999999999999999999999885554444444455
Q ss_pred CccEEEeCCCCc-----CCCCCceEEEEecCcc
Q 018401 245 YADVVTTTTHKS-----LRGPRGAMIFFRKGVK 272 (356)
Q Consensus 245 ~~D~~~~s~~K~-----l~gp~gG~l~~~~~~~ 272 (356)
+|++++++||| ++||..|++++++++.
T Consensus 258 -aDi~vgs~qkfg~P~g~GGP~aGflavr~~~~ 289 (954)
T PRK05367 258 -ADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYK 289 (954)
T ss_pred -CCEEEeeCcccCCCCCCCCCCEEEEEECHHHH
Confidence 99999999998 6777449999998753
No 277
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.52 E-value=8.9e-13 Score=130.95 Aligned_cols=172 Identities=15% Similarity=0.035 Sum_probs=117.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC----C-----CC------------------------
Q 018401 88 EYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK----P-----HD------------------------ 134 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~----~-----gd------------------------ 134 (356)
.....+|+++-+++++++|.+...-.||+|||.+|..++.+.-+ | +.
T Consensus 119 P~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~ 198 (608)
T TIGR03811 119 PATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLL 198 (608)
T ss_pred chHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccc
Confidence 45678899999999999999654335699999888866544311 0 00
Q ss_pred -------------------------eeeecCCCCCcccCccccccccccccccee---eEEEecccCCCCCCCCHHHHHH
Q 018401 135 -------------------------RIMALDLPHGGHLSHGYQTDTKKISAVSIF---FETMPYRLNESTGYIDYDQLEK 186 (356)
Q Consensus 135 -------------------------~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~d~~~l~~ 186 (356)
+++++...|.++.. .+.+.|.. ++.| +++ +++++|++.|++
T Consensus 199 ~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~K--------Aa~ilGlG~~~vv~V--pvD-~~~rmd~~~L~~ 267 (608)
T TIGR03811 199 ESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLK--------AADIIGIGLDQVIPV--PVD-SNYRMDINELEK 267 (608)
T ss_pred cccccchhhhhhhccccccccccceEEEECCCccHHHHH--------HHHHcCCCcccEEEe--ecC-CCCcCCHHHHHH
Confidence 34555544544432 44556653 4445 566 568999999999
Q ss_pred Hhhhc---C--CcEEEEc--CCCCCCcccHHHHHHHH---HHcCC--EEEEeccchhhh--cccC---------------
Q 018401 187 SATLF---R--PKLIVAG--ASAYARLYDYERIRKVC---NKQKA--IMLADMAHISGL--VAAG--------------- 237 (356)
Q Consensus 187 ~i~~~---~--~k~v~l~--~~n~g~~~~l~~I~~la---~~~g~--~vivD~a~~~g~--~~~~--------------- 237 (356)
.+.+. . +-+|+.+ .+.+|.+.|+++|+++| +++|+ +++||+|++.-. +..+
T Consensus 268 ~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~ 347 (608)
T TIGR03811 268 IIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVH 347 (608)
T ss_pred HHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhccc
Confidence 88631 2 2233434 44489999999999998 67887 699999975321 1111
Q ss_pred ------------CC------CCCCCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 238 ------------VI------PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 238 ------------~~------~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
+. -.++..+|.++..+|||++.|.+ |++++++.
T Consensus 348 ~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~ 399 (608)
T TIGR03811 348 AEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI 399 (608)
T ss_pred ccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH
Confidence 00 01345799999999999999999 99999885
No 278
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.51 E-value=8.7e-14 Score=134.16 Aligned_cols=202 Identities=22% Similarity=0.198 Sum_probs=143.3
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++.+..|+.||++.. +.+++|+|.+|..++++++.+||.||++...|.|+.. ++.++|+..+...-..++.
T Consensus 74 eAqe~aA~~fgAd~t-yFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~--------glilaGa~Pvyl~p~~np~ 144 (557)
T COG1982 74 EAQELAARVFGADHT-YFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHH--------GLILAGATPVYLEPSRNPL 144 (557)
T ss_pred HHHHHHHHHhCCCce-EEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHH--------HHHHcCCceEEecCCCCcc
Confidence 455889999999986 3348888899999999999999999999999988865 4556675554332222321
Q ss_pred C---CCCCHHHHHHHhhhc-CC-cEEEEc-CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCC-CC-CCcc
Q 018401 176 T---GYIDYDQLEKSATLF-RP-KLIVAG-ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PF-EYAD 247 (356)
Q Consensus 176 ~---~~~d~~~l~~~i~~~-~~-k~v~l~-~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~-~l-~~~D 247 (356)
- +.++.+.+.+++.++ .. |+++++ ++-.|.+.++++|.+.++.+++|+.+|++|.+-.-..+.... .. .++|
T Consensus 145 ~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~ 224 (557)
T COG1982 145 YGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGAD 224 (557)
T ss_pred ccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCce
Confidence 1 468999999887653 24 677777 555899999999999999999999999998654332222211 12 3699
Q ss_pred EEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHh
Q 018401 248 VVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 317 (356)
Q Consensus 248 ~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~ 317 (356)
+++.|.||.+++..- ..|.++++- . -..++++.+..-...++|+++.++++..|-.+..
T Consensus 225 ~~tqS~HK~l~alSQaS~iHv~~~~--------~---~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~ 284 (557)
T COG1982 225 FVTQSTHKLLAALSQASMIHVKDGR--------A---VNHERFNEALMMHQSTSPSYPLMASLDVARMQEG 284 (557)
T ss_pred EEEechhhhhhhhhhhHHHhhCCCc--------c---CCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhh
Confidence 999999999877655 777777520 0 1123333333333347889999999998544443
No 279
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.50 E-value=4.5e-13 Score=125.65 Aligned_cols=149 Identities=10% Similarity=0.059 Sum_probs=97.1
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.+|+.+++++|. ++|++++|+++++..++ .+.|||+|++++| .|..+...++..|+++..+ +.
T Consensus 53 ~Lr~~ia~~~~~--~~I~it~Gs~~al~~~~--~~~~gd~v~v~~P--------~y~~~~~~~~~~g~~~~~v--~~--- 115 (330)
T PRK05664 53 GLEAAARAYYGA--PQLLPVAGSQAAIQALP--RLRAPGRVGVLSP--------CYAEHAHAWRRAGHQVREL--DE--- 115 (330)
T ss_pred HHHHHHHHHhCC--CCEEECcCHHHHHHHHH--HccCCCEEEEcCC--------ChHHHHHHHHHcCCeEEEe--ch---
Confidence 345888888885 46777888888887554 3689999999994 4444444556677666544 32
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHH---HHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEE
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYE---RIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 250 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~---~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~ 250 (356)
+++++++. ++++++++ |+| ||.+.+.+ +|.++|+++|+++|+|+++....-...+....-..--+++
T Consensus 116 ------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~ 187 (330)
T PRK05664 116 ------AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVL 187 (330)
T ss_pred ------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEE
Confidence 24555553 67777776 888 99777755 5556678899999999997422110111111000123889
Q ss_pred eCCCCcCC--CCCceEEEEec
Q 018401 251 TTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 251 ~s~~K~l~--gp~gG~l~~~~ 269 (356)
.|++|.++ |.+-|+++.++
T Consensus 188 ~SfSK~~gl~GlRiG~~v~~~ 208 (330)
T PRK05664 188 RSFGKFFGLAGARLGFVLAEP 208 (330)
T ss_pred eeccccccCCCcceEEEEeCH
Confidence 99999774 33339999876
No 280
>PLN02397 aspartate transaminase
Probab=99.50 E-value=8.8e-13 Score=127.72 Aligned_cols=174 Identities=18% Similarity=0.153 Sum_probs=107.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCC--CCCccc-c-CCCc--hHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccc
Q 018401 83 YYGGNEYIDMAESLCQKRALEAFRL--DPEKWG-G-SLSG--SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 156 (356)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~-v-~~sg--s~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~ 156 (356)
.|+...+..++++++.+++.+..+. +++++. . +.+| +..+...+..++.|||+|++++|.|..+ ..
T Consensus 86 ~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y--------~~ 157 (423)
T PLN02397 86 EYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNH--------HN 157 (423)
T ss_pred CCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhH--------HH
Confidence 3555677888988888877554332 122231 1 2233 3333435555667999999999555444 33
Q ss_pred cccccceeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccc
Q 018401 157 KISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAH 229 (356)
Q Consensus 157 ~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~--~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~ 229 (356)
.+...|++++.+++. +.+++.+|++.+++.+.+ .++++++++ |+| ||.+.+ +++|+++|++||+++|+|++.
T Consensus 158 ~~~~~g~~~~~v~l~-~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y 236 (423)
T PLN02397 158 IFRDAGVPVRTYRYY-DPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAY 236 (423)
T ss_pred HHHHcCCeEEEeecc-cCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccc
Confidence 556778777666431 223468999998887752 256777776 788 997665 567788899999999999996
Q ss_pred hhhhcccCC----CC-CCC--CC-ccEEEeCCCCcCC--CCCceEEE
Q 018401 230 ISGLVAAGV----IP-SPF--EY-ADVVTTTTHKSLR--GPRGAMIF 266 (356)
Q Consensus 230 ~~g~~~~~~----~~-~~l--~~-~D~~~~s~~K~l~--gp~gG~l~ 266 (356)
. +....+. .. ..+ .+ --+++.|++|.++ |-+-|+++
T Consensus 237 ~-~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v 282 (423)
T PLN02397 237 Q-GFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALS 282 (423)
T ss_pred C-CccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEE
Confidence 3 2111110 00 000 01 1377889999874 44449885
No 281
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.49 E-value=2.2e-12 Score=124.02 Aligned_cols=220 Identities=11% Similarity=0.057 Sum_probs=129.9
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK------ 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~------ 131 (356)
-+|.|.+++.+.+.. +... .. .+ .+ +...++.++++++.+. +.+.+++||++|+..++.....
T Consensus 57 ~~p~v~~ai~~~~~~-~~~~--~~-~~-~~----~~~~~l~~~l~~~~~~--~~~~~~~SGseA~e~Alk~a~~~~~~~~ 125 (396)
T PRK04073 57 RHPKIIQALKDQADK-VTLT--SR-AF-HS----DQLGPWYEKVAKLTGK--DMVLPMNTGAEAVETAIKAARRWAYDVK 125 (396)
T ss_pred CCHHHHHHHHHHHhh-cccc--cc-cc-CC----HHHHHHHHHHHhcCCC--CeEEEcCChHHHHHHHHHHHHHHhhhcc
Confidence 479999999998875 2111 11 11 11 2223455777777664 3556699999999988876521
Q ss_pred ---CC-CeeeecCCCCC-cccCccccc----ccc--cccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 018401 132 ---PH-DRIMALDLPHG-GHLSHGYQT----DTK--KISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 132 ---~g-d~Vl~~~~~~~-~~~~~~~~~----~~~--~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~- 199 (356)
+| ++|+..+..|. ......... +.. .....+ +..+ +. .|++++++++.+ ++++|+++
T Consensus 126 g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~------~d~~~l~~~i~~-~~~~viiep 194 (396)
T PRK04073 126 GVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPG--IKKI--PY------GDLEALKAAITP-NTAAFLVEP 194 (396)
T ss_pred CCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCC--ceEe--CC------CCHHHHHHhccc-CeEEEEEcC
Confidence 34 67777764443 332111000 000 000111 1112 11 278999998876 78999888
Q ss_pred CCC-CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhc----ccCCCCCCCCCccEEEeCCCCcCCCC--CceEEEE
Q 018401 200 ASA-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLV----AAGVIPSPFEYADVVTTTTHKSLRGP--RGAMIFF 267 (356)
Q Consensus 200 ~~n-~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~----~~~~~~~~l~~~D~~~~s~~K~l~gp--~gG~l~~ 267 (356)
+.| +|.+.| +++|.++|++||+++|+|++|+ +|.. ..+.... ..|++++| |.++++ +.|+++.
T Consensus 195 ~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~---~pdi~~~s--K~lg~gg~~ig~~~~ 269 (396)
T PRK04073 195 IQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNV---TPDMYILG--KALGGGVFPISCVAA 269 (396)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCC---CCCEEEec--ccccCCCCcceEEEE
Confidence 444 786654 8899999999999999999987 3211 1111111 26888875 988664 3488888
Q ss_pred ecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 268 RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 268 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
++ ++.+.+........++. +....++..++|+.+.++
T Consensus 270 ~~--------------~i~~~~~~~~~~~t~~~-~~~~~aaa~aaL~~~~~~ 306 (396)
T PRK04073 270 NR--------------DILGVFTPGSHGSTFGG-NPLACAVSIAALEVLEEE 306 (396)
T ss_pred cH--------------HHHhhhcCCCCCCCCCC-CHHHHHHHHHHHHHHHhc
Confidence 77 45555433222222333 455666666889887653
No 282
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.48 E-value=3.3e-12 Score=122.97 Aligned_cols=223 Identities=16% Similarity=0.121 Sum_probs=131.5
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------- 130 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------- 130 (356)
.+|+|++++.+.+.. +... +..++ + +..+.+++.++++++.+ .+.+++||++++..++..+.
T Consensus 48 ~~p~v~~a~~~~~~~-~~~~--~~~~~--~----~~~~~~~~~l~~~~~~~--~~~~~~SGs~A~e~al~~~~~~~~~~~ 116 (400)
T PTZ00125 48 CHPKILAALINQAQK-LTLT--SRAFY--N----DVLGLAEKYITDLFGYD--KVLPMNSGAEAGETALKFARKWGYEVK 116 (400)
T ss_pred CCHHHHHHHHHHHHh-cccc--ccccc--C----HHHHHHHHHHHhCCCCC--EEEEeCCcHHHHHHHHHHHHHHHHhcc
Confidence 489999999998764 2111 11111 1 23345667778877653 45679999999998887653
Q ss_pred ---CCCCeeeecCCCCCcccCcccccccc-ccc--cc--ceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 018401 131 ---KPHDRIMALDLPHGGHLSHGYQTDTK-KIS--AV--SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 201 (356)
Q Consensus 131 ---~~gd~Vl~~~~~~~~~~~~~~~~~~~-~~~--~~--g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~ 201 (356)
..+++|++.+..+.+........... ... .. ...+..+ + ..|++++++.+...++++|++. ..
T Consensus 117 ~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~d~~~le~~l~~~~~~~v~~ep~~ 188 (400)
T PTZ00125 117 GIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELV--D------YNDVEALEKLLQDPNVAAFIVEPIQ 188 (400)
T ss_pred CCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEe--C------CCCHHHHHHHhCCCCeEEEEEcCcc
Confidence 13467777764433322111100000 000 00 0001111 1 2389999999863378999887 33
Q ss_pred C-CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhc----ccCCCCCCCCCccEEEeCCCCcCCCCC-c-eEEEEec
Q 018401 202 A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLV----AAGVIPSPFEYADVVTTTTHKSLRGPR-G-AMIFFRK 269 (356)
Q Consensus 202 n-~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~----~~~~~~~~l~~~D~~~~s~~K~l~gp~-g-G~l~~~~ 269 (356)
| +|.+.+ +++|.++|++||+++|+|++|+ +|.. ....... ..|++++| |+|+++. . |+++.++
T Consensus 189 ~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~---~pd~~~~s--K~l~~g~~~ig~v~~~~ 263 (400)
T PTZ00125 189 GEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGV---KPDIVLLG--KALSGGLYPISAVLAND 263 (400)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCC---CCCEEEEc--ccccCCCcCcEEEEEcH
Confidence 4 787776 9999999999999999999985 3211 1111111 26888876 9997653 3 8888877
Q ss_pred CcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 270 GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
++.+.+........++ .+....++..++++.+.++
T Consensus 264 --------------~~~~~~~~~~~~~t~~-~~~~~~~aa~~~l~~i~~~ 298 (400)
T PTZ00125 264 --------------DVMLVIKPGEHGSTYG-GNPLACAVAVEALEVLKEE 298 (400)
T ss_pred --------------HHHhhccCCCCCCCCC-cCHHHHHHHHHHHHHHHhc
Confidence 4555543322122233 3345566667788888654
No 283
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.47 E-value=2.1e-12 Score=125.30 Aligned_cols=236 Identities=14% Similarity=0.068 Sum_probs=138.2
Q ss_pred HcCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchH
Q 018401 46 WKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSP 120 (356)
Q Consensus 46 ~~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~ 120 (356)
+..+++..+-. ..+|.|.+++.+.+.+.. . +...+.... ++++.+++.+... +++.|++||++
T Consensus 48 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~-----~~~~~~~~~----~lae~l~~~~~~~-~~v~~~~sGse 115 (423)
T TIGR00713 48 NEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT--S-----YGAPTEAEI----LLAKEIISRVPSV-EMVRFVNSGTE 115 (423)
T ss_pred CEEEEccccccccccCCCCHHHHHHHHHHHHhCC--c-----CCCCCHHHH----HHHHHHHHhCCcc-cEEEEeCCHHH
Confidence 34567664432 358999999999887621 1 111222233 4557777776543 46777999999
Q ss_pred HHHHHHHhh--cCCCCeeeecCCCCCcccCccccc-------c----cccc-cccceeeEEEecccCCCCCCCCHHHHHH
Q 018401 121 SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQT-------D----TKKI-SAVSIFFETMPYRLNESTGYIDYDQLEK 186 (356)
Q Consensus 121 a~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~-------~----~~~~-~~~g~~~~~v~~~~~~~~~~~d~~~l~~ 186 (356)
++..+++.. ...+++|++....|.+........ . ...+ ...+ ...+.++ ..|++++++
T Consensus 116 A~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~~d~~~l~~ 187 (423)
T TIGR00713 116 ATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFA--KLTLVLP------YNDLEALEE 187 (423)
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccc--cceEEeC------CCCHHHHHH
Confidence 999887754 345688998886665542100000 0 0000 0000 0011111 127899999
Q ss_pred Hhhh--cCCcEEEEc--CCCCCCccc----HHHHHHHHHHcCCEEEEeccchhhhccc-C--CCCCCCCCccEEEeCCCC
Q 018401 187 SATL--FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAA-G--VIPSPFEYADVVTTTTHK 255 (356)
Q Consensus 187 ~i~~--~~~k~v~l~--~~n~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~-~--~~~~~l~~~D~~~~s~~K 255 (356)
.+.+ .++++|++. ++|+|.+.+ +++|.++|++||+++|+|++|+ |.... . ....+. ..|+++ ..|
T Consensus 188 ~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~r~g~~~~~~~~~~-~pDi~t--~sK 263 (423)
T TIGR00713 188 VFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMT-GFRVALGGAQEYFGV-EPDLTT--LGK 263 (423)
T ss_pred HHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-ccccCcchhHHHhCC-Ccchhh--hhh
Confidence 8873 257788885 666775555 7899999999999999999984 32210 0 000111 257665 559
Q ss_pred cCCC-CCceEEEEecCcchhccCCcchhhhHHHhhcccc--CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 256 SLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 256 ~l~g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
.+++ -+.|+++.++ ++.+.+.... ........+....++..++|+.+.++
T Consensus 264 ~l~~G~pig~v~~~~--------------~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~ 316 (423)
T TIGR00713 264 IIGGGLPVGAFGGRR--------------EIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEE 316 (423)
T ss_pred hhcCCCceeeeeEHH--------------HHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcc
Confidence 8863 3458888877 5555554211 11111234566677777889988764
No 284
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.46 E-value=1e-12 Score=123.68 Aligned_cols=179 Identities=13% Similarity=0.049 Sum_probs=110.3
Q ss_pred cCCeeecCCCCCcHH--HHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchHHHH
Q 018401 47 KGLELIPSENFTSVS--VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~--V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~a~~ 123 (356)
+.++|+.|+||.+++ .... ..+. .||.. . ..+++.+++++|++ +++|++++|+++++.
T Consensus 25 ~~i~ls~Nenp~~~~~~~~~~--~~~~-----~Yp~~-----------~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~ 85 (339)
T PRK06959 25 AWLDLSTGINPHGYPVPPVPA--DAWR-----RLPED-----------D-DGLAACAARYYGAPDAAHVLPVAGSQAAIR 85 (339)
T ss_pred hhceeccCCCCCCCCCCCCCH--HHHH-----hCCCc-----------h-HHHHHHHHHHhCCCCcccEEECcCHHHHHH
Confidence 468999999985322 2211 1121 13322 1 35669999999996 578888888888887
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
.+ ..++++|| |++.+| .|..+...+...|.+++.+ +.+ + +. +.+ .+++++++ |+|
T Consensus 86 ~l-~~~~~~g~-v~v~~P--------~y~~y~~~~~~~g~~~~~v--~~~-~------~~----~~~-~~~~v~l~nPnN 141 (339)
T PRK06959 86 AL-PALLPRGR-VGIAPL--------AYSEYAPAFARHGHRVVPL--DEA-A------DT----LPA-ALTHLIVVNPNN 141 (339)
T ss_pred HH-HHhcCCCe-EEEcCC--------CcHHHHHHHHHCCCEEEee--ccc-c------hh----ccc-cCCEEEEeCCCC
Confidence 44 45678887 777874 4444444555667666444 443 1 22 222 45677776 888
Q ss_pred -CCCcccHHHHHHH---HHHcCCEEEEeccchhhhcccCCCCC-CCCCccEEEeCCCCcCC--CCCceEEEEec
Q 018401 203 -YARLYDYERIRKV---CNKQKAIMLADMAHISGLVAAGVIPS-PFEYADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 203 -~g~~~~l~~I~~l---a~~~g~~vivD~a~~~g~~~~~~~~~-~l~~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
||.+.+.+++.++ |++++.++|+|+++.--.....+... .. .--+++.|++|.++ |.+-|+++.++
T Consensus 142 PTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~-~~vi~l~SfSK~~gl~GlRiGy~v~~~ 214 (339)
T PRK06959 142 PTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDR-PGLVVLRSVGKFFGLAGVRAGFVLAAP 214 (339)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCC-CCEEEEecChhhcCCcchheEEEecCH
Confidence 9988887766655 56789999999997532111111110 00 01278899999764 33339999876
No 285
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.46 E-value=1e-12 Score=121.49 Aligned_cols=259 Identities=17% Similarity=0.135 Sum_probs=166.5
Q ss_pred chhhhcccccccChHHHHHHHHHHHHHH----------cCCee--------ecCCCCCcHHHHHHHHhhhhccCCCCCCC
Q 018401 19 WPKQLNAPLEVVDPEIADIIEHEKARQW----------KGLEL--------IPSENFTSVSVMQAVGSVMTNKYSEGYPG 80 (356)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~i~L--------~~~~~~~~~~V~~a~~~~l~~~~~~~~~~ 80 (356)
..++|++++-.++....+.+++..-..+ ..+|| ..+..+..+.+.+++..+-.. .-+
T Consensus 99 i~Dc~~RPi~~VPG~~v~l~dR~S~D~n~tfk~tG~~~~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~-----~cs 173 (519)
T KOG1357|consen 99 IRDCFERPICSVPGAWVDLMDRVSDDYNWTFKYTGTRSRCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLS-----RCS 173 (519)
T ss_pred HhHhhcCCCcCCCCceEEeeeeeccCCCceEEeccceeeeeeecccccccccccCCcCChHHHHHHHHhccc-----ccc
Confidence 3456666666666666555554321111 12333 244556678888888765332 112
Q ss_pred CccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccc
Q 018401 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISA 160 (356)
Q Consensus 81 ~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 160 (356)
++.-.|+ .++.+++.+.+|+++|++.. ++.+-|-+.|...+.+++.||.-|+.....|.+... ++.+
T Consensus 174 s~~e~G~---~~~hkelE~l~A~f~g~e~a--~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~~--------GaRL 240 (519)
T KOG1357|consen 174 SRHEAGT---TEEHKELEELVARFLGVEDA--IVFSMGFATNSMNIPSLLGKGSLIISDELNHASLIT--------GARL 240 (519)
T ss_pred cchhccc---HHHHHHHHHHHHHhcCCcce--EEEeccccccccCcceeecCCcceeeccccchheec--------cccc
Confidence 2222222 22334455999999999876 345556677777788999999999999999988866 7778
Q ss_pred cceeeEEEecccCCCCCCCCHHHHHHHhhh----c--CC-----cEEEEc---CCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 161 VSIFFETMPYRLNESTGYIDYDQLEKSATL----F--RP-----KLIVAG---ASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 161 ~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~----~--~~-----k~v~l~---~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
.|+..++. ..+ |.++||+.+.+ . +| |++++. .+.-|.+.++.++.++++++.++++.|
T Consensus 241 SgAtiRVf--kHN------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lD 312 (519)
T KOG1357|consen 241 SGATTRVF--RHN------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLD 312 (519)
T ss_pred cCceEEEE--ecC------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEee
Confidence 88877655 333 55666665533 1 22 344443 445689999999999999999999999
Q ss_pred ccchhhhccc-CC--CC-CCC--CCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCC-
Q 018401 227 MAHISGLVAA-GV--IP-SPF--EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQG- 299 (356)
Q Consensus 227 ~a~~~g~~~~-~~--~~-~~l--~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g- 299 (356)
+||+.|+++. +. .. ++. ..+|++.+.+.|++ |..||++..++ ++.+.+.........+
T Consensus 313 EAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSf-ga~GGyiagsk--------------~lid~lrt~s~~~~yat 377 (519)
T KOG1357|consen 313 EAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAGGYIAGSK--------------ELIDYLRTPSPSALYAT 377 (519)
T ss_pred ccccccccCCCCcceeeccCCCchhheeecceehhhc-ccccceecCcH--------------HHHhhhccCCCceeecc
Confidence 9999998842 21 11 111 25899999999976 45578998888 5666555443323333
Q ss_pred CCcHHHHHHHHHHHHHHhc
Q 018401 300 GPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 300 t~~~~~~~al~~Al~~~~~ 318 (356)
+.+.+.+.-...+++.+..
T Consensus 378 ~~sppvaqq~~ssl~~i~G 396 (519)
T KOG1357|consen 378 SLSPPVAQQILTSVKHIMG 396 (519)
T ss_pred cCChHHHHHHHHHHHhhcC
Confidence 3344444455577777764
No 286
>PRK12403 putative aminotransferase; Provisional
Probab=99.45 E-value=7.7e-12 Score=122.10 Aligned_cols=269 Identities=14% Similarity=0.020 Sum_probs=140.1
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------- 130 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------- 130 (356)
-+|.|.+++.+.+.. +...+ ..++. ..+...++.++++++++...+.+.|++||++|+..++....
T Consensus 71 ~hp~v~~A~~~q~~~-~~~~~---~~~~~---~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g 143 (460)
T PRK12403 71 GRKDLAAAAARQMEQ-LPYYN---MFFHT---THPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLG 143 (460)
T ss_pred CCHHHHHHHHHHHHh-CCCee---ccccc---CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhC
Confidence 479999999998876 21111 11111 11223345578888876544566779999999998887652
Q ss_pred CCCCeeeec-CCC-CCcccCccccc----ccc-cccccceeeEEEecccCC-CCCC--------CCHHHHHHHhhh---c
Q 018401 131 KPHDRIMAL-DLP-HGGHLSHGYQT----DTK-KISAVSIFFETMPYRLNE-STGY--------IDYDQLEKSATL---F 191 (356)
Q Consensus 131 ~~gd~Vl~~-~~~-~~~~~~~~~~~----~~~-~~~~~g~~~~~v~~~~~~-~~~~--------~d~~~l~~~i~~---~ 191 (356)
++++.+++. ... |+......... ++. .....+ +..+|.+... ..+. .+++++++.+.+ .
T Consensus 144 ~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~ 221 (460)
T PRK12403 144 KPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPD--VAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAE 221 (460)
T ss_pred CCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCC--CEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCC
Confidence 233444433 322 54433211100 000 000001 2223222100 0000 113556665532 2
Q ss_pred CCcEEEEcC--CCCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCCCCcCCCC--
Q 018401 192 RPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGP-- 260 (356)
Q Consensus 192 ~~k~v~l~~--~n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~~K~l~gp-- 260 (356)
++.+|++.| ++.|.+.+ +++|.++|++||+++|+|++|+ +|-.... ....++ ..|+++++ |.|+|.
T Consensus 222 ~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~~g--K~lggG~~ 298 (460)
T PRK12403 222 NVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGF-EPDTLSIA--KGLTSGYV 298 (460)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCC-CCCeEEEc--cccccccc
Confidence 456677763 33566666 9999999999999999999994 3222111 011121 26999866 999754
Q ss_pred CceEEEEecCcchhccCCcchhhhHHHhhccc---cC-CCCCCCCcHHHHHHHHHHHHHHhcccccchhh-cccccchHH
Q 018401 261 RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA---VF-PGLQGGPHNHTITGLAVALKQVCTLITFSHIH-VFSLHVYPA 335 (356)
Q Consensus 261 ~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~-~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~-~~~~~~~~~ 335 (356)
+-|++++++ ++.+.+... .. ..++ +.|....++..++|+.+.++.-.++.+ +..-.+...
T Consensus 299 Piga~v~~~--------------~i~~~~~~~~~~~~~~~T~-~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~ 363 (460)
T PRK12403 299 PMGGLVLSK--------------RIAEALVEQGGVFAHGLTY-SGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRC 363 (460)
T ss_pred ceEEEEECH--------------HHHHHHhcCCCccccCCCC-CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 235555666 444444221 11 1122 245677777778899997653334443 222222222
Q ss_pred HHhhhccccccccccCCc
Q 018401 336 FVSNQNNSENIEEDKGRP 353 (356)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~ 353 (356)
+-..+.....|++.+|+-
T Consensus 364 L~~l~~~~~~i~~vrG~G 381 (460)
T PRK12403 364 LREVFGDHPLVGEVQGAG 381 (460)
T ss_pred HHHHHhcCCCEEeEeecc
Confidence 222333445677777763
No 287
>PRK08637 hypothetical protein; Provisional
Probab=99.45 E-value=6.6e-12 Score=120.38 Aligned_cols=174 Identities=13% Similarity=0.013 Sum_probs=107.9
Q ss_pred CCchhHHHHHHHHHHHHHHHcC-CCC---CccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccc-c
Q 018401 85 GGNEYIDMAESLCQKRALEAFR-LDP---EKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKI-S 159 (356)
Q Consensus 85 ~~~~~~~~l~~~~~~~la~~~g-~~~---~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~-~ 159 (356)
+...+...+++++.+++.+..+ ..+ +++++|+|+++++..++.++++|||.|++++|.|+.+.. .+ .
T Consensus 41 ~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~ 112 (388)
T PRK08637 41 APPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKL--------TFNT 112 (388)
T ss_pred CCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHH
Confidence 3335567787777666665443 232 456679899999998889999999999999966644432 22 2
Q ss_pred ccceeeEEEecccCCCCCCCCHHHHHHHhh---hcCCcEEEEc-CCC-CCCccc---HHHHHHHHHH-----cCCEEEEe
Q 018401 160 AVSIFFETMPYRLNESTGYIDYDQLEKSAT---LFRPKLIVAG-ASA-YARLYD---YERIRKVCNK-----QKAIMLAD 226 (356)
Q Consensus 160 ~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~---~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~-----~g~~vivD 226 (356)
..|.+++.+ +...+++.+|++++++++. +...++++++ |+| ||...+ +++|+++|++ |++++|+|
T Consensus 113 ~~g~~vv~v--~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~D 190 (388)
T PRK08637 113 RRGAEIVTY--PIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVD 190 (388)
T ss_pred hcCCEEEEe--cccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEec
Confidence 356666555 4421345689999998886 2134456666 888 996665 5566666664 89999999
Q ss_pred ccchhhhcccCCC-----C-CCCC-Ccc-EEEeCCCCcCCC--CCceEEEEe
Q 018401 227 MAHISGLVAAGVI-----P-SPFE-YAD-VVTTTTHKSLRG--PRGAMIFFR 268 (356)
Q Consensus 227 ~a~~~g~~~~~~~-----~-~~l~-~~D-~~~~s~~K~l~g--p~gG~l~~~ 268 (356)
+++.--....... . .+.. .+- +.+.|++|.++. .+-|++++.
T Consensus 191 e~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 191 DAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred ccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEc
Confidence 9964211111000 0 0000 121 233488996543 344998865
No 288
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.45 E-value=5.2e-12 Score=121.36 Aligned_cols=235 Identities=11% Similarity=0.068 Sum_probs=135.6
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
+.|++..+-. +-+|.+.+++.+.+.... .... .| ..+++.++.++++++++. +++++++||+++
T Consensus 40 ~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~-~~-----~~~~~~~la~~l~~~~~~--~~v~~~~gg~eA 108 (396)
T PRK02627 40 EYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLI---HTSN-LY-----YIEPQEELAEKLVELSGM--DKVFFCNSGAEA 108 (396)
T ss_pred EEEECCccHHhccCCCCCHHHHHHHHHHHhhcc---cccc-cc-----CCHHHHHHHHHHHhhcCC--CEEEECCCcHHH
Confidence 4566654321 225899999998876521 1111 11 134556677888888765 567789999999
Q ss_pred HHHHHHhhcCCC-------CeeeecCCCCCcccCcccccccccccccceeeEEE-ecccCCCCC----CCCHHHHHHHhh
Q 018401 122 NFQVYTALLKPH-------DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM-PYRLNESTG----YIDYDQLEKSAT 189 (356)
Q Consensus 122 ~~~~l~al~~~g-------d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~----~~d~~~l~~~i~ 189 (356)
+.++++.+..++ ++|++....|.+...... ...+...... ..+.. .+. ..|++++++++.
T Consensus 109 ~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~ 180 (396)
T PRK02627 109 NEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATL-------SATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAIT 180 (396)
T ss_pred HHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHH-------HhcCCccccccCCCCC-CCceEeCCCCHHHHHHhcC
Confidence 998888665433 668877755543321111 0111000000 00111 111 228999999997
Q ss_pred hcCCcEEEEcCCC--CC-Ccc---cHHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCCCccEEEeCCCCcCCCC
Q 018401 190 LFRPKLIVAGASA--YA-RLY---DYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLRGP 260 (356)
Q Consensus 190 ~~~~k~v~l~~~n--~g-~~~---~l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~~~D~~~~s~~K~l~gp 260 (356)
+ ++++|++++++ +| ... .+++|.++|++||+++|+|++|+ +|.... .....+. ..|++++| |.+++.
T Consensus 181 ~-~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~-~pdi~t~s--K~~~~G 256 (396)
T PRK02627 181 D-KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGI-EPDIMTLA--KGLGGG 256 (396)
T ss_pred C-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCC-CCCEEEEc--chhhCC
Confidence 5 88999997433 45 232 48899999999999999999986 221110 0001110 25777655 988632
Q ss_pred -CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 261 -RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 261 -~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+-|+++.++ ++.+.+........+ +.+....++..++++.+.++
T Consensus 257 ~rig~~~~~~--------------~~~~~~~~~~~~~t~-~~~~~~~~aa~~~l~~~~~~ 301 (396)
T PRK02627 257 VPIGAVLAKE--------------KVADVFTPGDHGSTF-GGNPLACAAALAVIEIIEEE 301 (396)
T ss_pred cccEEEEEcH--------------HHHhccCCCCCCCCC-CCCHHHHHHHHHHHHHHhhc
Confidence 238888776 455544332111222 34556677777888877553
No 289
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.44 E-value=7.4e-13 Score=123.10 Aligned_cols=152 Identities=16% Similarity=0.106 Sum_probs=113.2
Q ss_pred HHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCC
Q 018401 99 KRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 178 (356)
Q Consensus 99 ~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 178 (356)
..++++.|+... ++.+||.+|+..++..++.+|++|+..+..|++........ ....|+....+ +.
T Consensus 84 ~~iaal~ga~~~--l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~----~~~~gie~~~v--d~------ 149 (409)
T KOG0053|consen 84 SGIAALEGAAHA--LLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKF----LPKFGGEGDFV--DV------ 149 (409)
T ss_pred HHHHHHhCCceE--EEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHH----HHHhCceeeee--ch------
Confidence 778888888763 44889998888899999999999999987777665432211 11234333222 22
Q ss_pred CCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCc
Q 018401 179 IDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 256 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~ 256 (356)
-|++++++++.+ ++++|++. |+| +..+.|+++|.++|+++|+++++|.+-+.+ ...+..+. |+|+++.|.+|+
T Consensus 150 ~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p-~~~~pL~l---GADIV~hSaTKy 224 (409)
T KOG0053|consen 150 DDLKKILKAIKE-NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP-YNQDPLPL---GADIVVHSATKY 224 (409)
T ss_pred hhHHHHHHhhcc-CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcc-cccChhhc---CCCEEEEeeeee
Confidence 267888888887 89999997 888 789999999999999999999999984333 12222233 399999999999
Q ss_pred CCCCCc---eEEEEec
Q 018401 257 LRGPRG---AMIFFRK 269 (356)
Q Consensus 257 l~gp~g---G~l~~~~ 269 (356)
|+|-.. |.++.+.
T Consensus 225 i~Ghsdvi~G~iv~n~ 240 (409)
T KOG0053|consen 225 IGGHSDVIGGSVVLNS 240 (409)
T ss_pred ecCCcceeeeEEecCc
Confidence 988654 7777763
No 290
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.43 E-value=6.8e-12 Score=120.28 Aligned_cols=231 Identities=13% Similarity=0.068 Sum_probs=130.5
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc------C
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------K 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------~ 131 (356)
-+|+|.+++.+.+.... .++. .+ ..+.+.++.+++.+..+ .+.+.|++||++++..++.... +
T Consensus 53 ~~p~v~~a~~~q~~~~~-~~~~--~~------~~~~~~~la~~l~~~~~--~~~v~f~~SGseA~e~Aik~ar~~~~~~~ 121 (395)
T PRK03715 53 CNPGMVEALAAQAEKLI-NPSP--AF------YNEPMAKLAGLLTQHSC--FDKVFFANSGAEANEGAIKLARKWGRKHK 121 (395)
T ss_pred CCHHHHHHHHHHHHhcc-cccc--cc------cCHHHHHHHHHHhhccC--CCEEEEeCCcHHHHHHHHHHHHHHhhccC
Confidence 37999999998876521 1111 11 12344445566665543 3456779999999998887663 1
Q ss_pred CC-CeeeecCCC-CCcccCccccccccccccccee-eEEEecccCC---CCCCCCHHHHHHHhhhcCCcEEEEcCCC--C
Q 018401 132 PH-DRIMALDLP-HGGHLSHGYQTDTKKISAVSIF-FETMPYRLNE---STGYIDYDQLEKSATLFRPKLIVAGASA--Y 203 (356)
Q Consensus 132 ~g-d~Vl~~~~~-~~~~~~~~~~~~~~~~~~~g~~-~~~v~~~~~~---~~~~~d~~~l~~~i~~~~~k~v~l~~~n--~ 203 (356)
+| .+|++.+.. |+...... .+.+.. ......+... .....|++++++.+.+ ++++|++.|.+ .
T Consensus 122 ~~r~~ii~~~~~yHG~t~~~~--------~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epv~~~g 192 (395)
T PRK03715 122 NGAYEIITFDHSFHGRTLATM--------SASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD-KTVAVMLEPVQGEG 192 (395)
T ss_pred CCCcEEEEECCCcCCChHHHH--------hhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC-CceEEEEeCCcCCC
Confidence 23 556666543 44332211 111100 0000000000 0012478999998876 78888887444 4
Q ss_pred CCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCCcCCCC-CceEEEEecCcchh
Q 018401 204 ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGP-RGAMIFFRKGVKEI 274 (356)
Q Consensus 204 g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K~l~gp-~gG~l~~~~~~~~~ 274 (356)
|...+ +++|.++|++||+++|+|++|+ |.-..+. ...++ ..|+++++ |.|+|. +.|+++.+++
T Consensus 193 G~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~GRtG~~~a~~~~gv-~PDi~t~g--K~lg~G~p~~av~~~~~---- 264 (395)
T PRK03715 193 GVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELSGI-EPDIMTLG--KGIGGGVPLAALLAKAE---- 264 (395)
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCcchhhHhhcCC-CCceeeeh--hhhhCCcceEEEEEccc----
Confidence 66655 9999999999999999999997 4211111 11111 27988876 999763 2366677763
Q ss_pred ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcc
Q 018401 275 NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVF 328 (356)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~ 328 (356)
+.. +.......+++ .+....++..++|+.+.++...++.++.
T Consensus 265 ----------i~~-~~~~~~~~T~~-g~pl~~aaala~L~~l~~~~l~~~~~~~ 306 (395)
T PRK03715 265 ----------VAV-FEAGDQGGTYN-GNPLMTAVGVAVISQLLAPGFLEGVRAR 306 (395)
T ss_pred ----------ccc-ccCCCcCCCCC-CCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 221 11111112222 3456677777889999765434444443
No 291
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.43 E-value=2.6e-13 Score=124.66 Aligned_cols=229 Identities=15% Similarity=0.143 Sum_probs=55.2
Q ss_pred CCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCC
Q 018401 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPH 133 (356)
Q Consensus 54 ~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~g 133 (356)
+-.++++++.+++.+...+....-|.- -.|..+.. ...+.+.++++.|++.. +++++..++..+++.++. +|
T Consensus 14 GRs~l~~~a~~a~~~~a~~Y~nLE~dl---~~G~Rg~R--~~~v~~ll~~ltgAeaA--~VvNnnaAAv~L~l~~la-~~ 85 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVASGYSNLEYDL---ETGKRGSR--YAHVEELLCELTGAEAA--LVVNNNAAAVLLALNTLA-KG 85 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccc---cccccccc--ccccccccccccccccc--cccccccccccccccccc-cc
Confidence 455789999999987665411101100 01111110 12344778889999765 456666677775666654 57
Q ss_pred CeeeecCCC---CCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCC---C--
Q 018401 134 DRIMALDLP---HGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAY---A-- 204 (356)
Q Consensus 134 d~Vl~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n~---g-- 204 (356)
.+|+++.-+ .++.+. ....+...|+.+++| ... ....++++++++++ +|.+++-. +||+ |
T Consensus 86 ~EvIvsRGelVeiGgsFR-----ip~vm~~sGa~lvEV--Gtt---N~t~~~Dye~AI~e-~Ta~ll~Vh~Sn~~i~GFt 154 (367)
T PF03841_consen 86 KEVIVSRGELVEIGGSFR-----IPDVMRQSGARLVEV--GTT---NRTHLSDYEKAITE-NTAALLKVHTSNFRIQGFT 154 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccc-----ccccccccccccccc--ccc---cccccccccccccc-ccccccccccccccccccc
Confidence 778876422 222211 112345567666555 433 35568888999998 88877554 6774 4
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhc-c---cCC------CCCCCCCccEEEeCCCCcCCCCCceEEEEecCcchh
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLV-A---AGV------IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 274 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~-~---~~~------~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~ 274 (356)
...+++++.+++++|++++++|.+. |.. + .++ ...--.|+|+++||+.|.|+||+.|+++.++
T Consensus 155 ~~~~~~el~~la~~~~lp~i~Dlgs--G~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~Gkk----- 227 (367)
T PF03841_consen 155 GEVSLEELAELAKEHGLPVIVDLGS--GLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGIIVGKK----- 227 (367)
T ss_dssp ------HHHHHHHHHT--EEEE-TT--HHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEEEEEH-----
T ss_pred ccccHHHHHHHHhhcCCcEEEECCC--CCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEEEeCH-----
Confidence 4457999999999999999999874 322 1 111 1111126999999999999999999999999
Q ss_pred ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 275 NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++.++++.... .+.--.+=..+++|.++|+...+
T Consensus 228 ---------~lI~~lk~~pl-~RalrvdK~tla~L~atL~~Y~~ 261 (367)
T PF03841_consen 228 ---------ELIEKLKKHPL-GRALRVDKLTLAALEATLRLYLD 261 (367)
T ss_dssp ---------HHHHHHHHHHH-TTT-B--HHHHHHHHHHHHH---
T ss_pred ---------HHHHHHhhCCC-cceEeeCHHHHHHHHHHHHHHHH
Confidence 56666554321 11123345678899999988774
No 292
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.43 E-value=1.2e-11 Score=119.72 Aligned_cols=262 Identities=11% Similarity=0.017 Sum_probs=143.3
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-----CC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL-----KP 132 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~-----~~ 132 (356)
-+|.|.+++.+.+.... .. .+++ . .+...++.+++.+.+....+.+.|++||++|+..+++... ..
T Consensus 92 ~hp~v~~Av~~ql~~l~---~~-~~~~-~----~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~g 162 (442)
T TIGR03372 92 RNPNVIAAVENQLAKQP---LH-SQEL-L----DPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRG 162 (442)
T ss_pred CCHHHHHHHHHHHHhCC---Cc-cccc-C----CHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcC
Confidence 48999999999887521 11 1111 1 1233345577777765444456669999999998887541 12
Q ss_pred CCeeeecCCCCCcccCccccc-----ccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh-----cCCcEEEEcC--
Q 018401 133 HDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----FRPKLIVAGA-- 200 (356)
Q Consensus 133 gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~-----~~~k~v~l~~-- 200 (356)
..+|+.....|.+........ ++....-....+..+| . .|.+.+++.+.+ .++.+|++.|
T Consensus 163 r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p--~------~d~~~~~~~l~~~~~~~~~vAavIvEpv~ 234 (442)
T TIGR03372 163 KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVA--F------GDIEAMLKALNECKKTGDDVAAIILEPIQ 234 (442)
T ss_pred CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeC--C------CCHHHHHHHHHHHhcCCCcEEEEEEeCcc
Confidence 456777765444332101100 0000000000111221 1 256777666642 2456777763
Q ss_pred CCCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCCCCcCCCC--CceEEEEecCc
Q 018401 201 SAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGV 271 (356)
Q Consensus 201 ~n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~~K~l~gp--~gG~l~~~~~~ 271 (356)
++.|...| +++|.++|++||+++|+|++|+ +|-.... ....++ ..|+++++ |.|++. +.|+++.++
T Consensus 235 g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~g--K~lg~G~~Pigavv~~~-- 309 (442)
T TIGR03372 235 GEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGV-QPDILCLA--KALGGGVMPIGATIATE-- 309 (442)
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCC-CCCeeeeh--hhhcCCcccceEEEecH--
Confidence 33566666 9999999999999999999994 3321110 111111 26998865 999753 346666666
Q ss_pred chhccCCcchhhhHHHhhccccCCCCCCCC--cHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhhcccc-cccc
Q 018401 272 KEINKQGKEVFYDYEEKINQAVFPGLQGGP--HNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSE-NIEE 348 (356)
Q Consensus 272 ~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~--~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 348 (356)
++.+.+....+ ...+|. |....++..++|+.+.++.-.++.++..-.+...+-..+.... .|++
T Consensus 310 ------------~i~~~~~~~~~-~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~ 376 (442)
T TIGR03372 310 ------------AVFSVLFDNPF-LHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIE 376 (442)
T ss_pred ------------HHHHhhhccCc-cccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 44444421110 112333 5677777778899997654344444433333333323333333 6777
Q ss_pred ccCCcc
Q 018401 349 DKGRPC 354 (356)
Q Consensus 349 ~~~~~~ 354 (356)
.+|+-+
T Consensus 377 vRG~Gl 382 (442)
T TIGR03372 377 ARGKGL 382 (442)
T ss_pred EecceE
Confidence 777644
No 293
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.42 E-value=2.7e-12 Score=120.49 Aligned_cols=182 Identities=13% Similarity=0.088 Sum_probs=117.7
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVY 126 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l 126 (356)
..|+|+.++||..+ ... ...||.. -...+++.+++++|.++++|++++|+++++..++
T Consensus 17 ~~i~l~~Nenp~~~---------~~~--~~~Yp~~-----------~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~ 74 (332)
T PRK06425 17 RIIDFSANINDFMD---------IGD--ISIYPEI-----------SYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLL 74 (332)
T ss_pred CEEEeccccCCCcC---------hhh--cccCcCc-----------CHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHH
Confidence 46899999998741 111 1123332 1234568999999999998888999999988777
Q ss_pred HhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 127 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 127 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
. +++||+ |++++ |.|..+...++..|++++.+| ++ + ...|.+.+++ .++|+|+++ |+| ||
T Consensus 75 ~-~~~~~~-vv~~~--------P~y~~y~~~~~~~G~~v~~vp--~~-~-~~~~~~~l~~----~~~k~v~l~nP~NPTG 136 (332)
T PRK06425 75 S-YINVGN-IIIVE--------PNFNEYKGYAFTHGIRISALP--FN-L-INNNPEILNN----YNFDLIFIVSPDNPLG 136 (332)
T ss_pred H-HhCCCc-EEEeC--------CChHHHHHHHHHcCCeEEEEe--CC-c-ccCcHHHHhh----cCCCEEEEeCCCCCcC
Confidence 6 567875 66667 444444445667787776664 44 1 3445554432 378999987 888 99
Q ss_pred Cccc---HHHHHHHHHHcCCEEEEeccchhhhcccCC-CCCCC-C--CccEEEeCCCCcCC--CCCceEEEEec
Q 018401 205 RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSPF-E--YADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 205 ~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~-~~~~l-~--~~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
.+.+ +++|.++|+++++++|+|++..- ...... ....+ . .--+++.|++|.++ |-+-|+++.++
T Consensus 137 ~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~-~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~ 209 (332)
T PRK06425 137 NLISRDSLLTISEICRKKGALLFIDEAFID-FVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD 209 (332)
T ss_pred CccCHHHHHHHHHHHHHcCCEEEEecchhc-cccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH
Confidence 7776 55667778899999999999531 111110 00000 0 13478899999764 23339999876
No 294
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.42 E-value=1.4e-11 Score=115.54 Aligned_cols=238 Identities=16% Similarity=0.090 Sum_probs=149.1
Q ss_pred cCCeeecCCCCC-----cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSENFT-----SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~~~-----~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
.+|++..+-.++ +|.|.+++.+.+.+...-+.|. +++-.+.+.+.++++.- +.|-|++|||+|
T Consensus 54 ~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pt-----------e~Ei~~Aell~~~~p~~-e~vrfvnSGTEA 121 (432)
T COG0001 54 EYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPT-----------ELEVELAELLIERVPSI-EKVRFVNSGTEA 121 (432)
T ss_pred EeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCCC-----------HHHHHHHHHHHHhcCcc-cEEEEecchhHH
Confidence 456666555553 7899999999998754222222 34445668888887753 456789999999
Q ss_pred HHHHHHhh--cCCCCeeeecCCCCCcccCcccccccccc------ccccee----eEEEecccCCCCCCCCHHHHHHHhh
Q 018401 122 NFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKI------SAVSIF----FETMPYRLNESTGYIDYDQLEKSAT 189 (356)
Q Consensus 122 ~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~------~~~g~~----~~~v~~~~~~~~~~~d~~~l~~~i~ 189 (356)
.+.+++.. ....|+|+...-.|.++...+......++ ...|.. -..+-++++ |++.+++++.
T Consensus 122 tmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN------D~~al~~~~~ 195 (432)
T COG0001 122 TMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN------DLEALEEAFE 195 (432)
T ss_pred HHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC------CHHHHHHHHH
Confidence 99888765 55678999888777766554433211111 111110 011111222 8999999998
Q ss_pred hc--CCcEEEEc--CCCCCCccc----HHHHHHHHHHcCCEEEEeccchhhhccc-CCCC-CCCCCccEEEeCCCCcCCC
Q 018401 190 LF--RPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAA-GVIP-SPFEYADVVTTTTHKSLRG 259 (356)
Q Consensus 190 ~~--~~k~v~l~--~~n~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~-~~~~-~~l~~~D~~~~s~~K~l~g 259 (356)
+. +...|++. ..|.|.+.| +++|.++|+++|+++|.|+++..--++. +-+. .+ -..|+.+++ |.++|
T Consensus 196 ~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~g-i~PDlttlG--KiIGG 272 (432)
T COG0001 196 EYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYG-VEPDLTTLG--KIIGG 272 (432)
T ss_pred HcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccC-cCcchhhhh--hhhcC
Confidence 64 56777876 556665444 8899999999999999999975222221 1111 01 026888877 98866
Q ss_pred CCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCC--cHHHHHHHHHHHHHHhcc
Q 018401 260 PRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGP--HNHTITGLAVALKQVCTL 319 (356)
Q Consensus 260 p~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~--~~~~~~al~~Al~~~~~~ 319 (356)
.-. |++-.++ ++++.+.+.-.-...||. |...++|-.++++.+.+.
T Consensus 273 GlP~ga~gGr~--------------eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~ 321 (432)
T COG0001 273 GLPIGAFGGRA--------------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTE 321 (432)
T ss_pred CcceeeeccHH--------------HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhc
Confidence 444 7777777 566654432211111443 456677777889888764
No 295
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.41 E-value=1.5e-11 Score=117.44 Aligned_cols=235 Identities=12% Similarity=0.077 Sum_probs=134.4
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..+++.++.. ..+|+|.+++.+.+.+.. ..+.. ...+++.++.+++.+.++. +.+.+++||+++
T Consensus 30 ~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~------~~~~~~~~la~~l~~~~~~--~~~~~~~sG~~a 98 (377)
T PRK02936 30 TYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIW---HVSNL------FTNSLQEEVASLLAENSAG--DLVFFCNSGAEA 98 (377)
T ss_pred EEEECCcchhhccCCCCCHHHHHHHHHHHHhcc---ccccc------cCCHHHHHHHHHHHhcCCC--CEEEEeCCcHHH
Confidence 4566655542 358999999999887621 11111 1134555566777766553 356669999999
Q ss_pred HHHHHHhh-cCCC-CeeeecCCCCC-cccCccccccccccccccee---eEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 018401 122 NFQVYTAL-LKPH-DRIMALDLPHG-GHLSHGYQTDTKKISAVSIF---FETMPYRLNESTGYIDYDQLEKSATLFRPKL 195 (356)
Q Consensus 122 ~~~~l~al-~~~g-d~Vl~~~~~~~-~~~~~~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~ 195 (356)
+..++... ..+| ++|++.+..|+ +............. ..+.. ...+.++ ..|++++++.+.+ ++++
T Consensus 99 ~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~d~~~l~~~~~~-~~~~ 170 (377)
T PRK02936 99 NEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKI-KEGFGPLLPGFTHVP------FNDIKALKEVMNE-EVAA 170 (377)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccc-cccCCCCCCCceEeC------CCCHHHHHHhccC-CeEE
Confidence 99888754 2344 56777765443 33221110000000 00000 0000001 1278999998876 7888
Q ss_pred EEEc-CCC-CCCc----ccHHHHHHHHHHcCCEEEEeccchhhhcccC----CCCCCCCCccEEEeCCCCcCCC-CCceE
Q 018401 196 IVAG-ASA-YARL----YDYERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSPFEYADVVTTTTHKSLRG-PRGAM 264 (356)
Q Consensus 196 v~l~-~~n-~g~~----~~l~~I~~la~~~g~~vivD~a~~~g~~~~~----~~~~~l~~~D~~~~s~~K~l~g-p~gG~ 264 (356)
|++. ..+ .|.. ..+++|.++|++||+++|+|++|+ |....+ ....++ ..|++++ +|++++ -+.|+
T Consensus 171 ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~~~~~~~~-~~di~t~--sK~l~~G~~ig~ 246 (377)
T PRK02936 171 VMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT-GIGRTGTLFAYEQFGL-DPDIVTV--AKGLGNGIPVGA 246 (377)
T ss_pred EEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhhCC-CCcEEEE--cccccCCCccEE
Confidence 8887 333 3432 349999999999999999999984 321111 111111 2577654 599863 24588
Q ss_pred EEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 265 IFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 265 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
++.++ ++.+.+........+ +.+.+..++..++++.+.++
T Consensus 247 v~~~~--------------~~~~~~~~~~~~~t~-~~~~~~~aaa~a~l~~~~~~ 286 (377)
T PRK02936 247 MIGKK--------------ELGTAFGPGSHGSTF-GGNPLAMAAAKEVLQVIKQP 286 (377)
T ss_pred EEEcH--------------HHHhhccCCCCCCCC-CCCHHHHHHHHHHHHHHHhc
Confidence 87776 455555432222222 35667778888889887543
No 296
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.40 E-value=4e-12 Score=117.40 Aligned_cols=174 Identities=14% Similarity=0.104 Sum_probs=124.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCcccc-CCCchHHHH---HHHHhh-cC----CCCeeeecCCCCCcccCcccccccccc
Q 018401 88 EYIDMAESLCQKRALEAFRLDPEKWGG-SLSGSPSNF---QVYTAL-LK----PHDRIMALDLPHGGHLSHGYQTDTKKI 158 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~v~v-~~sgs~a~~---~~l~al-~~----~gd~Vl~~~~~~~~~~~~~~~~~~~~~ 158 (356)
++..++-..+.+|+++..|.+. +.+ +++|+++-. ++|++. -. ..+.+|+++..|+.+.- .+
T Consensus 105 qG~l~li~~Lq~~L~~ITG~Da--vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA--------SA 174 (496)
T COG1003 105 QGYLELIYELQEWLKEITGMDA--VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA--------SA 174 (496)
T ss_pred HHHHHHHHHHHHHHHHhcCCce--eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh--------hH
Confidence 3445566678899999999875 356 777774322 256655 22 34689999999988843 34
Q ss_pred cccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CC-CcccHHHHHHHHHHcCCEEEEeccchhhhccc
Q 018401 159 SAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YA-RLYDYERIRKVCNKQKAIMLADMAHISGLVAA 236 (356)
Q Consensus 159 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g-~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~ 236 (356)
.+.|.++++| +.+ +++.+|+++|++++.+ ++.++.++.+| .| ...++.+|+++.|++|..|..|+|..-..+.
T Consensus 175 am~G~~VV~V--~~~-~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG- 249 (496)
T COG1003 175 AMAGFKVVVV--KCD-ENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVG- 249 (496)
T ss_pred hhcCceEEEE--ecC-CCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhc-
Confidence 5678666655 566 6789999999999987 89999998444 67 5557999999999999999999997544332
Q ss_pred CCCCCCCCCccEEEeCCCCcCCCCCc------eEEEEecCcchhccC
Q 018401 237 GVIPSPFEYADVVTTTTHKSLRGPRG------AMIFFRKGVKEINKQ 277 (356)
Q Consensus 237 ~~~~~~l~~~D~~~~s~~K~l~gp~g------G~l~~~~~~~~~~~~ 277 (356)
+..-+-.|+|++-...||+|+.|.| |-+.++..+.+..++
T Consensus 250 -~~rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~ 295 (496)
T COG1003 250 -LARPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPG 295 (496)
T ss_pred -cccccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCC
Confidence 2222222699999999999955444 567777655544443
No 297
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.40 E-value=9.8e-12 Score=113.90 Aligned_cols=178 Identities=12% Similarity=0.105 Sum_probs=121.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHcCC----CCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccc
Q 018401 83 YYGGNEYIDMAESLCQKRALEAFRL----DPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKI 158 (356)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~la~~~g~----~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~ 158 (356)
.|...++...+++++++.+.+.-|. +|+++++++++|+++..+.-.+.+|||.-+++.|-|++.-. .+
T Consensus 116 ~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdr--------dl 187 (471)
T KOG0256|consen 116 MFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDR--------DL 187 (471)
T ss_pred hcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccc--------cc
Confidence 4455566788888888888877664 78898889999999997777889999999999976655432 22
Q ss_pred c-ccceeeEEEecccCC-CCCCCCHHHHHHHhhh-----cCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEe
Q 018401 159 S-AVSIFFETMPYRLNE-STGYIDYDQLEKSATL-----FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 159 ~-~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~-----~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD 226 (356)
. ..|.++ +|+.+.. ++++++.+.||+++.+ .++|.|+++ |+| .|+..+ +..+.++|.++++-||+|
T Consensus 188 ~~rTgvei--vpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~D 265 (471)
T KOG0256|consen 188 RWRTGVEI--VPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISD 265 (471)
T ss_pred eeccCceE--EEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEee
Confidence 1 235445 4445543 3459999999988754 256777776 998 886665 556667788999999999
Q ss_pred ccchhhhcccC-------CCCCCCCCcc--EEEeCCCCcCCCCCc--eEEEEecC
Q 018401 227 MAHISGLVAAG-------VIPSPFEYAD--VVTTTTHKSLRGPRG--AMIFFRKG 270 (356)
Q Consensus 227 ~a~~~g~~~~~-------~~~~~l~~~D--~~~~s~~K~l~gp~g--G~l~~~~~ 270 (356)
+..+....... +...+-...| -++.|.+|-|+-|.= |+|+..++
T Consensus 266 EIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne 320 (471)
T KOG0256|consen 266 EIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNE 320 (471)
T ss_pred hhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecCh
Confidence 99643322111 0001100112 467788897643322 99998774
No 298
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.39 E-value=2.2e-11 Score=117.41 Aligned_cols=228 Identities=14% Similarity=0.139 Sum_probs=129.1
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------- 130 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------- 130 (356)
-+|+|.+++.+.+..... .+.. +. + +...++.+.++++++. +.+.|++||++++..+++...
T Consensus 56 ~~p~v~~A~~~~~~~~~~---~~~~-~~-~----~~~~~la~~l~~~~~~--~~v~~~~sGseA~e~Alk~ar~~~~~~~ 124 (406)
T PRK12381 56 AHPALREALNEQASKFWH---TGNG-YT-N----EPVLRLAKKLIDATFA--DRVFFCNSGAEANEAALKLARKYAHDRY 124 (406)
T ss_pred CCHHHHHHHHHHHhhccc---ccCc-cC-C----HHHHHHHHHHHhhCCC--CeEEEcCCcHHHHHHHHHHHHHHHhhcC
Confidence 389999999998865211 1111 11 1 1223455777777654 466779999999998887641
Q ss_pred -CCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CC----
Q 018401 131 -KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YA---- 204 (356)
Q Consensus 131 -~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g---- 204 (356)
..+.+|+..+..|++........-... ... ..+...+-.+. .....|++++++.+.+ ++++|++.|.+ +|
T Consensus 125 ~~~r~~ii~~~~~yHG~t~~~~~~~~~~-~~~-~~~~~~~~~~~-~~~~~d~~~l~~~l~~-~~aaviiEPv~~~gg~~~ 200 (406)
T PRK12381 125 GSHKSGIVAFKNAFHGRTLFTVSAGGQP-KYS-QDFAPLPPDIR-HAAYNDLNSASALIDD-QTCAVIVEPIQGEGGVIP 200 (406)
T ss_pred CCCCCeEEEECCCcCCcchhHHhhcCCc-ccc-cCCCCCCCCee-EeCCCCHHHHHHhccC-CeeEEEEeCCcCCCCCcC
Confidence 245677777655443321110000000 000 00000000000 0012478999998876 78888888655 43
Q ss_pred -CcccHHHHHHHHHHcCCEEEEeccchhhhcccCC-C---CCCCCCccEEEeCCCCcCCCC-CceEEEEecCcchhccCC
Q 018401 205 -RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV-I---PSPFEYADVVTTTTHKSLRGP-RGAMIFFRKGVKEINKQG 278 (356)
Q Consensus 205 -~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~-~---~~~l~~~D~~~~s~~K~l~gp-~gG~l~~~~~~~~~~~~g 278 (356)
....+++|.++|++||+++|+|++| .|....+. . ..++ ..|++++| |.++|. +-|+++.++
T Consensus 201 ~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~~~~~~~~v-~pDi~t~s--K~l~gG~~ig~~~~~~--------- 267 (406)
T PRK12381 201 ADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGV-TPDVLTTA--KALGGGFPIGAMLTTE--------- 267 (406)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcchhhhHhhCC-CCCEEEeh--hhhhCCCceEEEEEcH---------
Confidence 2345899999999999999999998 34321111 0 1111 26776555 998532 337777776
Q ss_pred cchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 279 KEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
++.+.+........+ +.+....++..++++.+.++
T Consensus 268 -----~~~~~~~~~~~~~t~-~~~pl~~aaa~a~l~~l~~~ 302 (406)
T PRK12381 268 -----KCASVMTVGTHGTTY-GGNPLASAVAGKVLELINTP 302 (406)
T ss_pred -----HHHhhcCCCCCCCCC-CCCHHHHHHHHHHHHHHhhc
Confidence 555555432222223 34556677777888888654
No 299
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.39 E-value=1.1e-11 Score=116.93 Aligned_cols=232 Identities=15% Similarity=0.156 Sum_probs=145.8
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC-CCCe
Q 018401 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK-PHDR 135 (356)
Q Consensus 57 ~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~-~gd~ 135 (356)
.+++..+++|.. .+ ..|++.+....|+ +.++++||.+.. +.+.+|..++..++..+++ |||+
T Consensus 54 apS~~m~aAM~~--GD---------D~Y~gdpSv~~Le----e~vael~G~E~a--lpthqGRgaE~Il~~~~~~~~g~e 116 (467)
T TIGR02617 54 AVTQSMQAAMMR--GD---------EAYSGSRSYYALA----ESVKNIFGYQYT--IPTHQGRGAEQIYIPVLIKKREQE 116 (467)
T ss_pred CCCHHHHHHHHc--CC---------cccccCchHHHHH----HHHHHHhCCceE--EECCCCchHHHHHHHhhccccccc
Confidence 467888888875 11 1234444455666 788889998864 4588889999888888888 7898
Q ss_pred eeecCC----CCCcccCcccccccccccccceeeEEEecc------cC-CCCCCCCHHHHHHHhhhc---CCcEEEEc-C
Q 018401 136 IMALDL----PHGGHLSHGYQTDTKKISAVSIFFETMPYR------LN-ESTGYIDYDQLEKSATLF---RPKLIVAG-A 200 (356)
Q Consensus 136 Vl~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------~~-~~~~~~d~~~l~~~i~~~---~~k~v~l~-~ 200 (356)
+.+... .|..++.-+ +-.+.+.|+..+.++.+ .+ +..+.+|+++|++++.+. +...+..+ .
T Consensus 117 ~g~~~~~~~v~hn~~fett----~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt 192 (467)
T TIGR02617 117 KGLDRSKMVAFSNYFFDTT----QGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATIT 192 (467)
T ss_pred ccccccccccceEEEEecc----hHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEE
Confidence 885443 233322211 11345666555443211 11 124689999999999752 23333333 3
Q ss_pred CC--CCCccc---HHHHHHHHHHcCCEEEEeccchhh-hc--------ccCCCCCC-----CCCccEEEeCCCCcCCCCC
Q 018401 201 SA--YARLYD---YERIRKVCNKQKAIMLADMAHISG-LV--------AAGVIPSP-----FEYADVVTTTTHKSLRGPR 261 (356)
Q Consensus 201 ~n--~g~~~~---l~~I~~la~~~g~~vivD~a~~~g-~~--------~~~~~~~~-----l~~~D~~~~s~~K~l~gp~ 261 (356)
+| .|.+.+ +.++.++|++||+.++.|+|-.+. +. ..+..... +..+|.+++|+.|.++.|-
T Consensus 193 ~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApv 272 (467)
T TIGR02617 193 CNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPM 272 (467)
T ss_pred EecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCcc
Confidence 34 355555 557888999999999999987653 32 11221100 2358999999999999999
Q ss_pred ceEEEEecCcchhccCCcchhhhHHHhhccccCC--C--CCCCCcHHHHHHHHHHHHHHhcc
Q 018401 262 GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFP--G--LQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 262 gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~--~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
||+++.+++- ++++..+.+..... + ++|....--+.|++..|++..++
T Consensus 273 Gg~Lag~d~~----------~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~ 324 (467)
T TIGR02617 273 GGLLCFKDDS----------FFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNL 324 (467)
T ss_pred cceEEecchh----------HHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccH
Confidence 9999998840 00222332222111 1 13777777788888888877654
No 300
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.37 E-value=1.3e-11 Score=119.77 Aligned_cols=245 Identities=14% Similarity=0.076 Sum_probs=140.2
Q ss_pred HcCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchH
Q 018401 46 WKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSP 120 (356)
Q Consensus 46 ~~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~ 120 (356)
++.+++..+.. ..+|.|.+++.+.+.... . ++..+ .....+++++.+.+. ..+.+.+++||++
T Consensus 50 ~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~--~-----~~~~~----~~~~~la~~L~~~~~-~~~~v~~~~sGse 117 (426)
T PRK00062 50 NEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL--S-----FGAPT----ELEVELAELVIELVP-SIEMVRMVNSGTE 117 (426)
T ss_pred CEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC--c-----CCCCC----HHHHHHHHHHHHhCC-CCCEEEEecCHHH
Confidence 34677765431 358999999999887621 1 11111 222345577777653 2346677999999
Q ss_pred HHHHHHHhhc--CCCCeeeecCCCCCcccCccccc-----ccccccccceeeE-----EEecccCCCCCCCCHHHHHHHh
Q 018401 121 SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFE-----TMPYRLNESTGYIDYDQLEKSA 188 (356)
Q Consensus 121 a~~~~l~al~--~~gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~-----~v~~~~~~~~~~~d~~~l~~~i 188 (356)
++..+++... ..+++|+..+..|.+........ ...+....+.... .+.++ ..|++++++.+
T Consensus 118 A~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~i 191 (426)
T PRK00062 118 ATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP------YNDLEAVEELF 191 (426)
T ss_pred HHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC------CCCHHHHHHHH
Confidence 9998888653 34678888876665542111000 0000000010000 01111 13788998888
Q ss_pred hh--cCCcEEEEc--CCCCCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCCC---CCCCCCccEEEeCCCCcC
Q 018401 189 TL--FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI---PSPFEYADVVTTTTHKSL 257 (356)
Q Consensus 189 ~~--~~~k~v~l~--~~n~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~~---~~~l~~~D~~~~s~~K~l 257 (356)
.. .++++|++. +++.|.+.+ +++|.++|++||+++|+|++|+ |....... ..+. ..|++++ +|.+
T Consensus 192 ~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~-~pDi~~~--gK~l 267 (426)
T PRK00062 192 EEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVALGGAQGYYGV-TPDLTTL--GKII 267 (426)
T ss_pred HhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccCCccHHHHhCC-CcchHhh--hhHh
Confidence 53 256677776 555787776 8999999999999999999996 43211110 0110 2576555 5988
Q ss_pred CCC-CceEEEEecCcchhccCCcchhhhHHHhhcccc--CCCCCCCCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 258 RGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 258 ~gp-~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
++. +.|+++.++ ++.+.+.... ......+.+.+..++..++|+.+.++...++.+
T Consensus 268 ~~G~p~ga~~~~~--------------~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~ 325 (426)
T PRK00062 268 GGGLPVGAFGGRR--------------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELE 325 (426)
T ss_pred hCCCcceeeeEHH--------------HHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHH
Confidence 643 346677766 4555553211 111112355666777778899987653333444
No 301
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.37 E-value=7.5e-11 Score=114.65 Aligned_cols=251 Identities=13% Similarity=0.070 Sum_probs=136.2
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
+.|++..+-. .-+|+|.+++.+.+.. ........ + .+ +...++.+++++++.-..+.+.|++||++|
T Consensus 44 ~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~-~~~~~~~~-~--~~----~~~~~la~~L~~~~~~~~~~v~f~~SGseA 115 (433)
T PRK08117 44 EYLDFTSGIAVANVGHRHPKVVQAIKEQADK-LMHGPSGV-I--YY----ESILKLAEELAEITPGGLDCFFFSNSGAEA 115 (433)
T ss_pred EEEECCcchhhccCCCCCHHHHHHHHHHHHh-ccCccccc-c--CC----HHHHHHHHHHHHhCCCCCCEEEEeCcHHHH
Confidence 4566654422 2479999999998875 21111111 1 11 233445678888874333456668999999
Q ss_pred HHHHHHhh--cCCCCeeeecCCC-CCcccCccc-----ccccc--cccccceeeEEEecccCC---CCC------CCCHH
Q 018401 122 NFQVYTAL--LKPHDRIMALDLP-HGGHLSHGY-----QTDTK--KISAVSIFFETMPYRLNE---STG------YIDYD 182 (356)
Q Consensus 122 ~~~~l~al--~~~gd~Vl~~~~~-~~~~~~~~~-----~~~~~--~~~~~g~~~~~v~~~~~~---~~~------~~d~~ 182 (356)
+..++... .....+|+..... |+......- ..++. .....+ +..+|++... ... ..|++
T Consensus 116 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (433)
T PRK08117 116 IEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGS--VYQAPYPYCDRCPKGEDPEVCFLECLR 193 (433)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCC--cEEeCCCccccccccCchhHHHHHHHH
Confidence 99888753 2233566666543 443321100 00000 000111 2223322110 000 02566
Q ss_pred HHHHHhhh----cCCcEEEEc--CCCCCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccE
Q 018401 183 QLEKSATL----FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADV 248 (356)
Q Consensus 183 ~l~~~i~~----~~~k~v~l~--~~n~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~ 248 (356)
++++.+.+ .++.+|++. .++.|.+.+ +++|.++|++||+++|+|++|+ |.-..+. ...+. ..|+
T Consensus 194 ~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv-~pDi 271 (433)
T PRK08117 194 DLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGV-VPDI 271 (433)
T ss_pred HHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCC-CCCE
Confidence 67776642 246677776 334566666 9999999999999999999997 4322111 11111 2577
Q ss_pred EEeCCCCcCCC-CCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 249 VTTTTHKSLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 249 ~~~s~~K~l~g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
+++ .|.+++ -+.|+++.++ ++.+.+........+ +.+....++..++|+.+.++.-.++++
T Consensus 272 ~t~--sK~lg~G~pigav~~~~--------------~i~~~~~~~~~~~T~-~~np~~~aaa~a~L~~l~~~~l~~~~~ 333 (433)
T PRK08117 272 MTI--AKGIASGLPLSAVVASK--------------ELMEQWPLGSHGTTF-GGNPVACAAALATLEVIKEEKLLDNAN 333 (433)
T ss_pred eeh--hhhccCCCcceeEEEcH--------------HHHhhccCCCCCCCC-CcCHHHHHHHHHHHHHHHhccHHHHHH
Confidence 655 499864 2337777776 455544322222222 346677788888999886543334444
No 302
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.37 E-value=3.4e-11 Score=117.32 Aligned_cols=261 Identities=11% Similarity=0.043 Sum_probs=141.8
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc--C--C-
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL--K--P- 132 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~--~--~- 132 (356)
-+|+|.+++.+.+.... .. .+++ ..+...++.+++.+++....+.+.|++||++|+..+++... . .
T Consensus 99 ~~p~v~~Ai~~ql~~l~---~~-~~~~-----~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~g 169 (459)
T PRK11522 99 RNPVVVSAVQNQLAKQP---LH-SQEL-----LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRG 169 (459)
T ss_pred CCHHHHHHHHHHHhhCc---cc-cccc-----CCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCC
Confidence 47999999999887521 11 1111 11233345577777765444566679999999998887542 1 2
Q ss_pred CCeeeecCCCCCcccCcccc-----cccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh-----cCCcEEEEc--C
Q 018401 133 HDRIMALDLPHGGHLSHGYQ-----TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----FRPKLIVAG--A 200 (356)
Q Consensus 133 gd~Vl~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~-----~~~k~v~l~--~ 200 (356)
...|+.....|.+.-..... .++....-..-.+..+ + ..|.+++++.+.+ .++.+|++. .
T Consensus 170 r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~--~------~~d~~~l~~~l~~~~~~~~~iAavIvEpv~ 241 (459)
T PRK11522 170 KFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHV--P------FGNIEAMRTALSECKKTGDDVAAVILEPIQ 241 (459)
T ss_pred CcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCccc--C------CCCHHHHHHHHHHhhccCCcEEEEEEeccc
Confidence 23577665444333110000 0000000000001111 1 1267888887752 235566776 3
Q ss_pred CCCCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccC----CCCCCCCCccEEEeCCCCcCCCC--CceEEEEecC
Q 018401 201 SAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKG 270 (356)
Q Consensus 201 ~n~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~----~~~~~l~~~D~~~~s~~K~l~gp--~gG~l~~~~~ 270 (356)
++.|...| ++++.++|++||+++|+|++|+ |.-..+ ....++ ..|+++++ |.|+|. +-|+++.++
T Consensus 242 g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv-~PDivt~g--K~lggG~~Pigav~~~~- 316 (459)
T PRK11522 242 GEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-GMGRTGKMFACEHENV-QPDILCLA--KALGGGVMPIGATIATE- 316 (459)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-cCCccchhhhhhccCC-CCCEEEec--hhhhCCCccceeEEEcH-
Confidence 33566665 9999999999999999999994 321111 011111 26988776 999763 235555555
Q ss_pred cchhccCCcchhhhHHHhhccccCCCCCCCC--cHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhhcccc-ccc
Q 018401 271 VKEINKQGKEVFYDYEEKINQAVFPGLQGGP--HNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSE-NIE 347 (356)
Q Consensus 271 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~--~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 347 (356)
++.+.+....+ ...+|. |....++..++|+.+.++.-.++.++..-.+...+-..+.... .|+
T Consensus 317 -------------~i~~~~~~~~~-~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~ 382 (459)
T PRK11522 317 -------------EVFSVLFDNPF-LHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQ 382 (459)
T ss_pred -------------HHHHHhccCCc-ccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCcee
Confidence 34443321111 112344 6677777778899998764445555443333333332232333 567
Q ss_pred cccCCcc
Q 018401 348 EDKGRPC 354 (356)
Q Consensus 348 ~~~~~~~ 354 (356)
+.+|+-+
T Consensus 383 ~VrG~Gl 389 (459)
T PRK11522 383 EARGKGM 389 (459)
T ss_pred eEEecee
Confidence 7777644
No 303
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.37 E-value=7.6e-11 Score=113.64 Aligned_cols=235 Identities=12% Similarity=0.107 Sum_probs=131.6
Q ss_pred cCCeeecC--CC---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPS--EN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~--~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+ .. .-+|+|.+++.+.+.... .. .. . ..+.. ..++.+.++++++. +.+.+++||+++
T Consensus 41 ~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~--~~-~~-~-~~~~~----~~~l~~~l~~~~~~--~~~~~~~sGseA 109 (403)
T PRK05093 41 EYIDFAGGIAVTALGHCHPALVKALKEQGEKLW--HI-SN-V-FTNEP----ALRLAKKLIDATFA--ERVFFANSGAEA 109 (403)
T ss_pred EEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcC--cc-cC-c-cCCHH----HHHHHHHHHhhCCC--CEEEEeCchHHH
Confidence 34666543 11 248999999999887522 11 11 1 11111 23455777777654 356779999999
Q ss_pred HHHHHHhhc--------CCCCeeeecCC-CCCcccCccccc----ccccccccceeeEEEecccCCCCCCCCHHHHHHHh
Q 018401 122 NFQVYTALL--------KPHDRIMALDL-PHGGHLSHGYQT----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 188 (356)
Q Consensus 122 ~~~~l~al~--------~~gd~Vl~~~~-~~~~~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i 188 (356)
+..++.... ...+.|+..+. -|+......... +..+.......+..+ + ..|++++++.+
T Consensus 110 ~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~d~~~l~~~l 181 (403)
T PRK05093 110 NEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHV--P------FNDLAAVKAVI 181 (403)
T ss_pred HHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEe--C------CCCHHHHHHHh
Confidence 998887541 12345666554 344433111000 000000001111111 1 12789999988
Q ss_pred hhcCCcEEEEcCCC-CC-Ccc----cHHHHHHHHHHcCCEEEEeccchhhhcccCCC-CC-CCC-CccEEEeCCCCcCCC
Q 018401 189 TLFRPKLIVAGASA-YA-RLY----DYERIRKVCNKQKAIMLADMAHISGLVAAGVI-PS-PFE-YADVVTTTTHKSLRG 259 (356)
Q Consensus 189 ~~~~~k~v~l~~~n-~g-~~~----~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~-~~-~l~-~~D~~~~s~~K~l~g 259 (356)
.+ ++++|+++|.+ +| ... .+++|.++|++||+++|+|++|+ |....+.. .. ... ..|+.++ .|.+++
T Consensus 182 ~~-~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~s~--sK~l~~ 257 (403)
T PRK05093 182 DD-HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDLFAYMHYGVTPDILTS--AKALGG 257 (403)
T ss_pred cC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchhhhhcCCCCCEEEe--cccccC
Confidence 76 78999998655 44 332 38999999999999999999987 43222210 00 001 2576665 498863
Q ss_pred -CCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 260 -PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 260 -p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
-+.|+++.++ ++.+.+........++ .+.+..++..++|+.+.++
T Consensus 258 G~rig~vv~~~--------------~i~~~l~~~~~~~t~~-~~~~~~~aa~a~L~~~~~~ 303 (403)
T PRK05093 258 GFPIGAMLTTA--------------EIASHFKVGTHGSTYG-GNPLACAVAEAVFDIINTP 303 (403)
T ss_pred CcceEEEEEcH--------------HHHhhcCCCCCCCCCC-CCHHHHHHHHHHHHHHhhc
Confidence 2338888877 5555554322222333 3445566666778887543
No 304
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.37 E-value=4.1e-11 Score=115.27 Aligned_cols=272 Identities=14% Similarity=0.124 Sum_probs=146.8
Q ss_pred cCCeeecCC-----CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~-----~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+- ..-+|.|.+++.+.+.... +....++ + +...++.+++.+..... +.+.|++||+++
T Consensus 41 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~~~~~--~----~~~~~la~~L~~~~~~~-~~v~f~~sGseA 110 (408)
T PRK04612 41 EYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLW---HTSNVFY--S----APPLKLAEELVTASRFA-EKVFLCNSGTEA 110 (408)
T ss_pred EEEEcCccHhhccCCCCCHHHHHHHHHHHHhcc---ccccccC--C----HHHHHHHHHHHhhCCCC-CEEEEcCchHHH
Confidence 356664332 2348999999999887521 1111111 1 12223446666665322 456679999999
Q ss_pred HHHHHHhhc------C--C-CCeeeecCCCCCcccCcccc-----cccccccccceeeEEEecccCCCCCCCCHHHHHHH
Q 018401 122 NFQVYTALL------K--P-HDRIMALDLPHGGHLSHGYQ-----TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKS 187 (356)
Q Consensus 122 ~~~~l~al~------~--~-gd~Vl~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~ 187 (356)
+..+++... . + ..+|+.....|.+....... .++....-.-..+..+ + ..|++.+++.
T Consensus 111 ~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~--~------~~d~~~l~~~ 182 (408)
T PRK04612 111 NEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYV--D------FNDVEALEAA 182 (408)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEc--C------CCCHHHHHHh
Confidence 998886542 1 1 23577766544433210000 0000000000001111 1 2378889888
Q ss_pred hhhcCCcEEEEcCCC-CC-Ccc----cHHHHHHHHHHcCCEEEEeccchhhhcccC-CCC-CCCC-CccEEEeCCCCcCC
Q 018401 188 ATLFRPKLIVAGASA-YA-RLY----DYERIRKVCNKQKAIMLADMAHISGLVAAG-VIP-SPFE-YADVVTTTTHKSLR 258 (356)
Q Consensus 188 i~~~~~k~v~l~~~n-~g-~~~----~l~~I~~la~~~g~~vivD~a~~~g~~~~~-~~~-~~l~-~~D~~~~s~~K~l~ 258 (356)
+...++.++++.|.+ +| ... -+++|.++|++||+++|+|++|+ |.-..+ ... ...+ ..|++++| |.++
T Consensus 183 ~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t~~--K~l~ 259 (408)
T PRK04612 183 MAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLA--KALG 259 (408)
T ss_pred hCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEEEc--chhc
Confidence 864356666776655 44 222 28899999999999999999986 321111 100 0001 25777776 9986
Q ss_pred CC-CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHH
Q 018401 259 GP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFV 337 (356)
Q Consensus 259 gp-~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~ 337 (356)
+. +-|+++.++ ++.+.+........++ .+....++..++|+.+.++...++.++..-.....+-
T Consensus 260 ~G~piga~~~~~--------------~~~~~~~~~~~~~t~~-~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~ 324 (408)
T PRK04612 260 GGFPIGAMLAGP--------------KVAETMQFGAHGTTFG-GNPLAAAVARVALRKLASPQIAANVARQSAALRAGLE 324 (408)
T ss_pred CCCceEEEEECH--------------HHHhhhcCCCcCCCCC-CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 42 237777665 4444443322222333 4567777777889998765444455544333333333
Q ss_pred hhhccccccccccCCcc
Q 018401 338 SNQNNSENIEEDKGRPC 354 (356)
Q Consensus 338 ~~~~~~~~~~~~~~~~~ 354 (356)
..+.....+++.+|+.+
T Consensus 325 ~l~~~~~~i~~vrg~Gl 341 (408)
T PRK04612 325 ALNAEFGVFAQVRGRGL 341 (408)
T ss_pred HHHhhCCCeeeeeccce
Confidence 33444567778877754
No 305
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.37 E-value=2.7e-11 Score=119.22 Aligned_cols=279 Identities=16% Similarity=0.083 Sum_probs=146.3
Q ss_pred cCCeeecCC--C---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC-CCCCccccCCCchH
Q 018401 47 KGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGGSLSGSP 120 (356)
Q Consensus 47 ~~i~L~~~~--~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g-~~~~~v~v~~sgs~ 120 (356)
..|++..+- . .-+|+|.+++.+.+... ..... .+. ...+...++.+.+.+++. .+.+.+.|++||++
T Consensus 90 ~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~-~~~~~---~~~---~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsE 162 (504)
T PLN02760 90 KYLDALAGLWCTALGGSEPRLVAAATEQLNKL-PFYHS---FWN---RTTKPSLDLAKELLEMFTARKMGKVFFTNSGSE 162 (504)
T ss_pred EEEEcCcCHHhcccCCCCHHHHHHHHHHHhhc-cceec---ccc---cCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHH
Confidence 456665432 1 24899999999988752 11111 000 011223344567666643 33345667999999
Q ss_pred HHHHHHHhhc-------CCC-CeeeecCCC-CCcccCccc----cccccc--ccccceeeEEEecccC-----CCCC---
Q 018401 121 SNFQVYTALL-------KPH-DRIMALDLP-HGGHLSHGY----QTDTKK--ISAVSIFFETMPYRLN-----ESTG--- 177 (356)
Q Consensus 121 a~~~~l~al~-------~~g-d~Vl~~~~~-~~~~~~~~~----~~~~~~--~~~~g~~~~~v~~~~~-----~~~~--- 177 (356)
|+..++.... .++ .+|+..+.. |+..+.... ..++.. ....+ +..++++.. +...
T Consensus 163 A~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~ 240 (504)
T PLN02760 163 ANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPF--VLHTDCPHYWRFHLPGETEEE 240 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCC--cEEeCCCcccccCCCCCcHHH
Confidence 9998887652 122 567766644 433321100 000000 00000 111221110 0000
Q ss_pred --CCCHHHHHHHhhh---cCCcEEEEcCC--CCCCccc----HHHHHHHHHHcCCEEEEeccc-hhhhcccC--CCCCCC
Q 018401 178 --YIDYDQLEKSATL---FRPKLIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADMAH-ISGLVAAG--VIPSPF 243 (356)
Q Consensus 178 --~~d~~~l~~~i~~---~~~k~v~l~~~--n~g~~~~----l~~I~~la~~~g~~vivD~a~-~~g~~~~~--~~~~~l 243 (356)
....+++++.+.. .++.+|++.|. +.|.+.| +++|.++|++||+++|+|++| ++|-.... ....++
T Consensus 241 ~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv 320 (504)
T PLN02760 241 FSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNI 320 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCC
Confidence 0112456666642 24567777643 3566666 999999999999999999999 45543211 111121
Q ss_pred CCccEEEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhccc-------cCCCCCCCCcHHHHHHHHHHHH
Q 018401 244 EYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA-------VFPGLQGGPHNHTITGLAVALK 314 (356)
Q Consensus 244 ~~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~~gt~~~~~~~al~~Al~ 314 (356)
..|+++++ |.|+|. +-|++++++ ++.+.+... ....+++. +..+.++..++|+
T Consensus 321 -~PDivtlg--K~lggG~~PigAv~~~~--------------~i~d~~~~~~~~~~~~~h~~T~~g-nPl~~Aaala~Le 382 (504)
T PLN02760 321 -KPDLVSLA--KALSSAYMPIGAVLVSP--------------EISDVIHSQSNKLGSFAHGFTYSG-HPVSCAVALEALK 382 (504)
T ss_pred -CCcEEEec--ccccCCccccceEeecH--------------HHHhhhhcccccccCcccCCCCCC-CHHHHHHHHHHHH
Confidence 27998887 999763 235567776 455544321 11223333 5666777778899
Q ss_pred HHhcccccchhhcccccchHHHHhhhccccccccccCCc
Q 018401 315 QVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKGRP 353 (356)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (356)
.+.++.-.++.++..-.+...+-.. ...-+|++.+|+-
T Consensus 383 ~i~~~~l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~G 420 (504)
T PLN02760 383 IYKERNIPEHVNKIAPRFQDGIKAF-SGSPIIGEIRGTG 420 (504)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHH-hcCCCeeeEEeCc
Confidence 9987644455554333332222221 2344677776664
No 306
>PLN02624 ornithine-delta-aminotransferase
Probab=99.36 E-value=5.9e-11 Score=116.42 Aligned_cols=219 Identities=17% Similarity=0.106 Sum_probs=125.1
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC-------
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK------- 131 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~------- 131 (356)
+|+|.+++.+.+.. +... ...+ . ++ ...++.+.++++++. +.+.|++||++++..++.....
T Consensus 93 ~p~v~~ai~~ql~~-~~~~--~~~~-~-~~----~~~~la~~L~~~~~~--~~~~f~~SGseA~e~AlklAr~~~~~~~g 161 (474)
T PLN02624 93 HPKIIKALTEQAEK-LTLS--SRAF-Y-ND----KFPEFAEYLTSMFGY--DMVLPMNTGAEGVETAIKLARKWGYEKKG 161 (474)
T ss_pred CHHHHHHHHHHHHh-cCCc--cccc-C-CH----HHHHHHHHHHhhcCC--CeEEEeCChHHHHHHHHHHHHHHHHhhcC
Confidence 89999999998876 2111 1111 1 12 223455778887764 3566799999999988864321
Q ss_pred -C-CC-eeeecCCCCCcc-cCccccc----ccc--cccccceeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEEc
Q 018401 132 -P-HD-RIMALDLPHGGH-LSHGYQT----DTK--KISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG 199 (356)
Q Consensus 132 -~-gd-~Vl~~~~~~~~~-~~~~~~~----~~~--~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~--~~~k~v~l~ 199 (356)
+ +. .|+.....|.+. ....... ... .....+ +..+ +. .|++.+++.+.. .++++|++.
T Consensus 162 ~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~--~~~~--~~------~d~~~l~~~l~~~~~~iaaiiiE 231 (474)
T PLN02624 162 IPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPG--HLKV--DF------GDLDALEKIFEEDGDRIAAFLFE 231 (474)
T ss_pred CCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCC--ceEe--CC------CCHHHHHHHHHhCCCCEEEEEEC
Confidence 1 33 355544333222 1100000 000 000011 1112 11 268889888863 256778887
Q ss_pred -CCC-CCCccc----HHHHHHHHHHcCCEEEEeccchhhhccc------CCCCCCCCCccEEEeCCCCcCCCC--CceEE
Q 018401 200 -ASA-YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAA------GVIPSPFEYADVVTTTTHKSLRGP--RGAMI 265 (356)
Q Consensus 200 -~~n-~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~------~~~~~~l~~~D~~~~s~~K~l~gp--~gG~l 265 (356)
..+ +|.+.| +++|.++|++||+++|+|++|+ |.-.. +.... ..|++++| |.++++ +.|++
T Consensus 232 pv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i---~pDiv~ls--K~lggG~~pigav 305 (474)
T PLN02624 232 PIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEV---RPDVVILG--KALGGGVIPVSAV 305 (474)
T ss_pred CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCC---CCCEEEec--ccccCCCCcceee
Confidence 333 677666 9999999999999999999996 32111 11111 26888876 988764 33777
Q ss_pred EEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 266 FFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+.++ ++.+.+........+ +.+....++..++++.+.++
T Consensus 306 ~~~~--------------~i~~~~~~~~~~~T~-~g~pl~~aaa~aaLe~l~~~ 344 (474)
T PLN02624 306 LADK--------------DVMLCIKPGEHGSTF-GGNPLASAVAMAALQVVQDE 344 (474)
T ss_pred eecH--------------HHHhHhccCCcCCCC-CCCHHHHHHHHHHHHHHHhc
Confidence 7766 444444322111222 34556677777888887653
No 307
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.35 E-value=4.1e-11 Score=116.12 Aligned_cols=242 Identities=12% Similarity=0.052 Sum_probs=132.8
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------- 130 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------- 130 (356)
-+|+|.+++.+.+.... ..... .+ ..+...++.+.+.+.+....+.+.|++||++++..+++...
T Consensus 59 ~~p~v~~ai~~q~~~~~-~~~~~--~~-----~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~ 130 (423)
T PRK05964 59 NHPYIDQAIREQLDRLD-HVIFA--GF-----THEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRG 130 (423)
T ss_pred CCHHHHHHHHHHHhhCC-Ccccc--cc-----CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcC
Confidence 37999999998887521 00100 01 11233345677777765333466779999999998887542
Q ss_pred -CCCCeeeecCCCCCcccCcccccccccc---cccc--eeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEEcC--
Q 018401 131 -KPHDRIMALDLPHGGHLSHGYQTDTKKI---SAVS--IFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAGA-- 200 (356)
Q Consensus 131 -~~gd~Vl~~~~~~~~~~~~~~~~~~~~~---~~~g--~~~~~v~~~~~~~~~~~d~~~l~~~i~~--~~~k~v~l~~-- 200 (356)
....+|+.....|.+............. ...+ .....++++.+ +....+++.+++.+.+ .++.+|++.|
T Consensus 131 ~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i 209 (423)
T PRK05964 131 EPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPD-GYEQATLDALEALLEKHAGEIAAFIVEPLV 209 (423)
T ss_pred CCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcc-hhHHHHHHHHHHHHHhCCCcEEEEEEeccc
Confidence 1235788777555443211111000000 0000 01223433322 1112237888888853 2455677665
Q ss_pred CC-CCCcc----cHHHHHHHHHHcCCEEEEeccchhhhcccC-C---CCCCCCCccEEEeCCCCcCCCC--CceEEEEec
Q 018401 201 SA-YARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAG-V---IPSPFEYADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 201 ~n-~g~~~----~l~~I~~la~~~g~~vivD~a~~~g~~~~~-~---~~~~l~~~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
.. .|... .+++|.++|++||+++|+|++|+ |.-..+ . ...+. .+|+++++ |+|+|+ +.|+++.++
T Consensus 210 ~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~G~~~a~~~~~v-~pDi~~~~--K~l~gG~~p~~av~~~~ 285 (423)
T PRK05964 210 QGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIAT-GFGRTGTLFACEQAGV-SPDIMCLS--KGLTGGYLPLAATLCTA 285 (423)
T ss_pred ccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCcchhHHHhcCC-CCCeeeee--hhhhcCcccceEEEEcH
Confidence 22 34333 38899999999999999999994 321111 1 11111 27888776 999665 337777776
Q ss_pred CcchhccCCcchhhhHHHhhccc--cCCCCC-C--CCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 270 GVKEINKQGKEVFYDYEEKINQA--VFPGLQ-G--GPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~-g--t~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
++.+.+... ...... + +.+..++++..++++.+.++.-.++.+
T Consensus 286 --------------~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~ 333 (423)
T PRK05964 286 --------------EIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVA 333 (423)
T ss_pred --------------HHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 455544321 001111 2 356777888889999887643333333
No 308
>PRK06062 hypothetical protein; Provisional
Probab=99.35 E-value=7.7e-11 Score=114.80 Aligned_cols=252 Identities=10% Similarity=0.018 Sum_probs=138.0
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+-. .-+|+|.+++.+.+.... ...+ . + ..+...++.+++.++.....+.+.|++||++|
T Consensus 54 ~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~-~~~~--~-~-----~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA 124 (451)
T PRK06062 54 RYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLC-TVAP--A-H-----ANDARSEAARLIAERAPGDLSKVFFTNGGADA 124 (451)
T ss_pred EEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcC-CcCC--c-c-----CCHHHHHHHHHHHHhCCCCCCEEEEcCChHHH
Confidence 4566654322 247999999999887521 1111 1 1 11223345577777765434567779999999
Q ss_pred HHHHHHhh--cCCCCeeeecCCCCCcccCccccc-----ccc-cccccceeeEEEecccCCC-CC--CCC-------HHH
Q 018401 122 NFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQT-----DTK-KISAVSIFFETMPYRLNES-TG--YID-------YDQ 183 (356)
Q Consensus 122 ~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~-----~~~-~~~~~g~~~~~v~~~~~~~-~~--~~d-------~~~ 183 (356)
+..+++.. .....+|+.....|++........ .+. .....| +..++.+.... .+ .-| +++
T Consensus 125 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 202 (451)
T PRK06062 125 NEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAG--VVHFFGPFLYRSEFHATTEEEECERALAH 202 (451)
T ss_pred HHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCC--CEEeCCCCccccccCCCChHHHHHHHHHH
Confidence 99888754 233466777664444332100000 000 000111 11122111100 00 012 677
Q ss_pred HHHHhhh---cCCcEEEEcC--CCCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEe
Q 018401 184 LEKSATL---FRPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTT 251 (356)
Q Consensus 184 l~~~i~~---~~~k~v~l~~--~n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~ 251 (356)
+++.+.. .++.+|++.| .+.|.+.| +++|.++|++||+++|+|++|+ +|-.... ....++ ..|++++
T Consensus 203 le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PDi~t~ 281 (451)
T PRK06062 203 LERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPDLITF 281 (451)
T ss_pred HHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCCeeee
Confidence 7887753 2456777763 33566666 9999999999999999999996 2211100 111111 3798887
Q ss_pred CCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhccccC--CCCCCCCcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 252 TTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVF--PGLQGGPHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 252 s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
+ |.|+|. +-|+++.++ ++.+.+....+ ..+++ -+..+.++..++|+.+.++.-.++.++
T Consensus 282 g--K~lggG~~Pigav~~~~--------------~i~~~~~~~~~~~~~T~~-gnpl~~Aaa~a~L~~l~~~~l~~~~~~ 344 (451)
T PRK06062 282 A--KGVNSGYVPLGGVAISE--------------AIAATFADRPYPGGLTYS-GHPLACAAAVATINAMEEEGIVENAAR 344 (451)
T ss_pred c--hhhhcCCcCcEEEEEcH--------------HHHHHhccCCCCCCCCCC-CCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 6 999763 235566666 45554432211 12233 346677777788999977644444443
No 309
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.35 E-value=1.1e-10 Score=113.49 Aligned_cols=280 Identities=11% Similarity=0.048 Sum_probs=148.6
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+-. .-+|.|.+++.+.+.... +....+ .. .+...++.+.+.+.+....+.+.|++||+++
T Consensus 42 ~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~---~~~~~~-~~----~~~~~~la~~L~~~~p~~~~~v~f~~sGsEA 113 (443)
T PRK08360 42 EYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLI---HYTPIY-GF----PVEPLLLAEKLIEIAPGDNPKVSFGLSGSDA 113 (443)
T ss_pred EEEEccccHhhcccCCCCHHHHHHHHHHHHhcc---Cccccc-cC----cHHHHHHHHHHHHhCCCCCCEEEEcCCHHHH
Confidence 4566654422 248999999999887521 111111 11 1223345577777776544566779999999
Q ss_pred HHHHHHhh--cCCCCeeeecCCCCCcc-cCcccc-----ccccccc-ccceeeEEEecccCCC-CC--------CCCHHH
Q 018401 122 NFQVYTAL--LKPHDRIMALDLPHGGH-LSHGYQ-----TDTKKIS-AVSIFFETMPYRLNES-TG--------YIDYDQ 183 (356)
Q Consensus 122 ~~~~l~al--~~~gd~Vl~~~~~~~~~-~~~~~~-----~~~~~~~-~~g~~~~~v~~~~~~~-~~--------~~d~~~ 183 (356)
+..+++.. .....+|+.....|.+. ...... ..+.... ..+ +..++++.... .+ ..+++.
T Consensus 114 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (443)
T PRK08360 114 NDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSD--VHYIPYPDCYRCPFGKEPGSCKMECVEY 191 (443)
T ss_pred HHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCC--cEEEeCCccccccccCchhhhHHHHHHH
Confidence 99888754 23345666655443332 111100 0000000 111 22233221100 00 023455
Q ss_pred HHHHhhh----cCCcEEEEcCC-C-CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEE
Q 018401 184 LEKSATL----FRPKLIVAGAS-A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVT 250 (356)
Q Consensus 184 l~~~i~~----~~~k~v~l~~~-n-~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~ 250 (356)
+++.+.. .++++|++.|. + +|...+ +++|.++|++||+++|+|++|+ +|..... ....++ ..|+++
T Consensus 192 ~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~pDiit 270 (443)
T PRK08360 192 IKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EPDIIT 270 (443)
T ss_pred HHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CCCEEE
Confidence 6666642 36788888843 3 664443 8899999999999999999986 2221110 001111 268887
Q ss_pred eCCCCcCCCC-CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhccc
Q 018401 251 TTTHKSLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFS 329 (356)
Q Consensus 251 ~s~~K~l~gp-~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~ 329 (356)
+ .|.+++. +.|+++.++ ++.+.+........++ .+....++..++++.+.++.-.++.++..
T Consensus 271 l--sK~l~~G~pigav~~~~--------------~i~~~~~~~~~~~T~~-~~p~~~aaa~a~l~~l~~~~l~~~~~~~g 333 (443)
T PRK08360 271 L--GKPLGGGLPISATIGRA--------------EIMDSLPPLAHAFTLS-GNPVASAAALAVIEEIEEKNLLKRAEKLG 333 (443)
T ss_pred e--cccccCCceeEEEEEcH--------------HHHhhhcCCCCCCCCC-cCHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 6 5998642 348888776 4555543221122223 34455777778899887654344544433
Q ss_pred ccchHHHHhhhccccccccccCCcc
Q 018401 330 LHVYPAFVSNQNNSENIEEDKGRPC 354 (356)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (356)
..+...+-..+.....+++.+|+.+
T Consensus 334 ~~l~~~L~~l~~~~~~v~~vrg~Gl 358 (443)
T PRK08360 334 NYTKKRLEEMKKKHELIGDVRGIGL 358 (443)
T ss_pred HHHHHHHHHHHHhCCCeeeeeccce
Confidence 3332222222233446777777764
No 310
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.35 E-value=9.4e-11 Score=112.91 Aligned_cols=224 Identities=13% Similarity=0.108 Sum_probs=127.8
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------- 130 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------- 130 (356)
.+|+|.+++.+.+.. +.... . .+ .+. ...++.+.+++++|. +.+.+++||++++..++..+.
T Consensus 54 ~~p~v~~a~~~~~~~-~~~~~--~-~~-~~~----~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~ai~~a~~~~~~~~ 122 (401)
T TIGR01885 54 CHPKIVKALTEQAQK-LTLSS--R-AF-YND----VFGEFAEYVTKLFGY--DKVLPMNTGAEAVETAIKLARKWGYKVK 122 (401)
T ss_pred CCHHHHHHHHHHHHh-ccccc--c-cc-CCH----HHHHHHHHHHhhcCC--CEEEEeCccHHHHHHHHHHHHHHhhhhc
Confidence 389999999998865 21111 1 11 112 223455788888874 345669999999998888641
Q ss_pred --CC-CCeeeecCCCCCc-ccCcccccccccc-cccc---eeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-
Q 018401 131 --KP-HDRIMALDLPHGG-HLSHGYQTDTKKI-SAVS---IFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG- 199 (356)
Q Consensus 131 --~~-gd~Vl~~~~~~~~-~~~~~~~~~~~~~-~~~g---~~~~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k~v~l~- 199 (356)
.+ .+.|+.....|++ ............. ...+ ..+..+ +. .|+++|++++.+. ++.+|++.
T Consensus 123 ~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~d~~~le~~l~~~~~~~~avi~E~ 194 (401)
T TIGR01885 123 GIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKI--PY------NNLEALEEALEDHGPNVCAFIVEP 194 (401)
T ss_pred CCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEe--CC------CCHHHHHHHHHhcCCCEEEEEEeC
Confidence 13 4566666655443 2211110000000 0000 001111 11 2788999888632 45566665
Q ss_pred C-CCCCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccC----CCCCCCCCccEEEeCCCCcCCCC--CceEEEEe
Q 018401 200 A-SAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSPFEYADVVTTTTHKSLRGP--RGAMIFFR 268 (356)
Q Consensus 200 ~-~n~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~----~~~~~l~~~D~~~~s~~K~l~gp--~gG~l~~~ 268 (356)
. +++|...+ +++|.++|++||+++|+|++|. |.-..+ ....+ ...|++++| |.+++. +-|+++.+
T Consensus 195 v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~g~~G~~~~~~~~~-~~~di~~~g--K~l~~g~~~ig~v~~~ 270 (401)
T TIGR01885 195 IQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-GLGRTGKLLCVDHEN-VKPDIVLLG--KALSGGVYPVSAVLAD 270 (401)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHHhhcC-CCCCEEEee--ccccCCCCCcEEEEEc
Confidence 2 33676665 9999999999999999999984 422111 11111 136888876 998653 22667776
Q ss_pred cCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 269 KGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 269 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+ ++.+.+........++ .+.+..++..++|+.+.++
T Consensus 271 ~--------------~i~~~~~~~~~~~t~~-~~p~~~~aa~a~L~~i~~~ 306 (401)
T TIGR01885 271 D--------------DVMLTIKPGEHGSTYG-GNPLACAVAVAALEVLEEE 306 (401)
T ss_pred H--------------HHHhhccCCCCCCCCC-CCHHHHHHHHHHHHHHHhc
Confidence 6 4555544322222333 3456677777889988763
No 311
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.35 E-value=3e-11 Score=110.00 Aligned_cols=170 Identities=19% Similarity=0.288 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHcCCCCCcccc-CCCchHHHHHHHHhhcCCCCeeeecC-CCCCcccCc-cccc-ccccccccceeeEEE
Q 018401 93 AESLCQKRALEAFRLDPEKWGG-SLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSH-GYQT-DTKKISAVSIFFETM 168 (356)
Q Consensus 93 l~~~~~~~la~~~g~~~~~v~v-~~sgs~a~~~~l~al~~~gd~Vl~~~-~~~~~~~~~-~~~~-~~~~~~~~g~~~~~v 168 (356)
=++.+.+-+|+.||++..-|-- ..|||.|+..++.++++|||+.+... ..|...-.. +... ......-.|+.++.+
T Consensus 55 GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v 134 (403)
T PF06838_consen 55 GRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREV 134 (403)
T ss_dssp HHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE-
T ss_pred cHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEE
Confidence 3344558899999998763333 56999999999999999999998643 112111000 0000 011223456777777
Q ss_pred ecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CC-----CcccHHHHHHHHHHc--CCEEEEeccchhhhcccCCCC
Q 018401 169 PYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YA-----RLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIP 240 (356)
Q Consensus 169 ~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g-----~~~~l~~I~~la~~~--g~~vivD~a~~~g~~~~~~~~ 240 (356)
+ +. +++.+|++.+++++++ ++|+|.+.-|. +. .+.+++++++++|+. +++++||.+.. -.- ...
T Consensus 135 ~--L~-~dg~~D~~~i~~~~~~-~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYG--EFv-E~~- 206 (403)
T PF06838_consen 135 P--LT-EDGTIDWEAIKKALKP-NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYG--EFV-ETQ- 206 (403)
T ss_dssp ---B--TTSSB-HHHHHHHHHT-TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTT--TTT-SSS-
T ss_pred e--ec-CCCCcCHHHHHHhhcc-CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcc--eec-ccc-
Confidence 4 54 5589999999999997 89999996332 22 455677777777765 78999999853 221 111
Q ss_pred CCCC-CccEEEeCCCCcCCC---CCceEEEEecC
Q 018401 241 SPFE-YADVVTTTTHKSLRG---PRGAMIFFRKG 270 (356)
Q Consensus 241 ~~l~-~~D~~~~s~~K~l~g---p~gG~l~~~~~ 270 (356)
.|.+ |+|++.+|.-|..+| |.||+++.+++
T Consensus 207 EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~ 240 (403)
T PF06838_consen 207 EPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKD 240 (403)
T ss_dssp -GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHH
T ss_pred CccccchhheeccceeCCCCCccCcCCEEechHH
Confidence 1222 699999999998865 77899999985
No 312
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.34 E-value=1.5e-10 Score=112.47 Aligned_cols=252 Identities=15% Similarity=0.058 Sum_probs=134.9
Q ss_pred cCCeeecCC-----CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~-----~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+- ..-+|.|.+++.+.+.... .... . . ..+ +...++.+++++++....+.+.|++||+++
T Consensus 47 ~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~-~~~~-~-~-~~~----~~~~~la~~l~~~~p~~~~~v~f~~sGseA 118 (442)
T PRK13360 47 RVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELD-YAPA-F-Q-MGH----PKAFELANRIAEIAPGGLNHVFFTNSGSES 118 (442)
T ss_pred EEEECchhHHHhccCCCCHHHHHHHHHHHHhCC-Cccc-C-C-cCC----HHHHHHHHHHHHhCCCCCCEEEEeCCcHHH
Confidence 456654332 2348999999998887521 1111 0 0 111 223345577777764333466679999999
Q ss_pred HHHHHHhhcC-------C-CCeeeecCCCCCccc-Ccc----cccccccc--cccceeeEEEecccCCCC--CC------
Q 018401 122 NFQVYTALLK-------P-HDRIMALDLPHGGHL-SHG----YQTDTKKI--SAVSIFFETMPYRLNEST--GY------ 178 (356)
Q Consensus 122 ~~~~l~al~~-------~-gd~Vl~~~~~~~~~~-~~~----~~~~~~~~--~~~g~~~~~v~~~~~~~~--~~------ 178 (356)
+..++..... + ..+|+.....|.+.- ... ....+... ...+ +..+|.+.+... +.
T Consensus 119 ~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~ 196 (442)
T PRK13360 119 VDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPG--VDHLPHTLDLARNAFSKGQPEH 196 (442)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCC--CEEeCCCchhhccccCCChHHH
Confidence 9988775321 2 357887765544431 100 00001000 0011 222332211000 00
Q ss_pred --CCHHHHHHHhhh---cCCcEEEEcC--CCCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCC
Q 018401 179 --IDYDQLEKSATL---FRPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFE 244 (356)
Q Consensus 179 --~d~~~l~~~i~~---~~~k~v~l~~--~n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~ 244 (356)
-.++++++.+.. .++.+|++.| ++.|...+ +++|.++|++||+++|+|++|+ +|..... ....++
T Consensus 197 ~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv- 275 (442)
T PRK13360 197 GAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV- 275 (442)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-
Confidence 024577777752 2455677763 33566666 9999999999999999999994 4432211 111111
Q ss_pred CccEEEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhccc-------cCCCCCCCCcHHHHHHHHHHHHH
Q 018401 245 YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA-------VFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 245 ~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
..|+++++ |.|+|. +-|++++++ ++.+.+... ....+++ .+....++..++|+.
T Consensus 276 ~PDivt~g--K~l~gG~~P~gav~~~~--------------~i~~~~~~~~~~~~~~~~~~T~~-g~pl~~aaa~a~L~~ 338 (442)
T PRK13360 276 TPDLLTCA--KGLTNGAIPMGAVFVSS--------------EIHDAFMQGPEAGIEFFHGYTYS-GHPLACAAALATLDL 338 (442)
T ss_pred CCceeeee--eccccCccceEEEEEcH--------------HHHHHhhcCCccccccccCCCCC-CCHHHHHHHHHHHHH
Confidence 26888776 999653 235566666 344433221 1122333 366677888889999
Q ss_pred Hhcccccchhh
Q 018401 316 VCTLITFSHIH 326 (356)
Q Consensus 316 ~~~~~~~~~~~ 326 (356)
+.++.-.++.+
T Consensus 339 l~~~~l~~~~~ 349 (442)
T PRK13360 339 YEREGLLTRAA 349 (442)
T ss_pred HHhCCHHHHHH
Confidence 97653333333
No 313
>PRK07046 aminotransferase; Validated
Probab=99.34 E-value=9.2e-11 Score=114.22 Aligned_cols=245 Identities=13% Similarity=0.133 Sum_probs=138.7
Q ss_pred cCCeeecCCCC-----CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~~-----~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
+.|++..+-.+ -+|.|.+++.+.+......+ .. .+.+.++.+.+.+.++ .+.+.|++|||++
T Consensus 76 ~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~-------~~----~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA 142 (453)
T PRK07046 76 RYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTM-------LP----SEDAAWVGEELARRFG--LPYWQVATTATDA 142 (453)
T ss_pred EEEEecccccccccCCCCHHHHHHHHHHHHhCCCCC-------CC----CHHHHHHHHHHHHHhC--CCEEEEECCHHHH
Confidence 35666544332 37999999999887632111 11 1333456677777775 4567789999999
Q ss_pred HHHHHHhh--cCCCCeeeecCCCCCcccCccccccccc-----ccccceee----EEEecccCCCCCCCCHHHHHHHhhh
Q 018401 122 NFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKK-----ISAVSIFF----ETMPYRLNESTGYIDYDQLEKSATL 190 (356)
Q Consensus 122 ~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~----~~v~~~~~~~~~~~d~~~l~~~i~~ 190 (356)
+..+++.. ....++|+...-.|.+...........+ ....|... ..+.++. -|++.+++.+..
T Consensus 143 ~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------nd~~~l~~~l~~ 216 (453)
T PRK07046 143 NRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF------NDLAALEAALAD 216 (453)
T ss_pred HHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC------CCHHHHHHHhCC
Confidence 99888754 3345678877655544321111000000 00011000 0011111 278999988854
Q ss_pred cCCcEEEEcCC--CCCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCCCC-CCCCCccEEEeCCCCcCCCCCc-
Q 018401 191 FRPKLIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFEYADVVTTTTHKSLRGPRG- 262 (356)
Q Consensus 191 ~~~k~v~l~~~--n~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~-~~l~~~D~~~~s~~K~l~gp~g- 262 (356)
.++.+|++.|- +.|.+.+ +++|.++|++||+++|+|++++++.-..+... .++ ..|+++++ |.++|.-.
T Consensus 217 ~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~gv-~PDi~t~g--K~lggG~Pi 293 (453)
T PRK07046 217 GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTRAHGL-EPDFLVVG--KPIAGGVPC 293 (453)
T ss_pred CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhHHhCC-Cccceeeh--hhhcCCCcc
Confidence 46778888743 3454433 89999999999999999999862211111111 111 26999876 99875433
Q ss_pred eEEEEecCcchhccCCcchhhhHHHhhcccc---CCC---CCCC--CcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 263 AMIFFRKGVKEINKQGKEVFYDYEEKINQAV---FPG---LQGG--PHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 263 G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~---~~gt--~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
|++..++ ++.+.+.... ..+ ..+| .|...+++..+.|+.+.++...++.++
T Consensus 294 ~av~g~~--------------~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~ 352 (453)
T PRK07046 294 AVYGFSA--------------ELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLA 352 (453)
T ss_pred eeeeehH--------------HHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 7777777 4555443210 011 1122 356667777788998876543444443
No 314
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.34 E-value=7.5e-11 Score=111.55 Aligned_cols=243 Identities=12% Similarity=0.096 Sum_probs=141.3
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCC-Ce
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPH-DR 135 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~g-d~ 135 (356)
-+|+|.+++.+.+.+.. .....+ . + +...++.+.++++.+.+ .+.+++||++++..++... ...| ++
T Consensus 41 ~~p~v~~ai~~ql~~~~---~~~~~~-~-~----~~~~~la~~l~~~~~~~--~v~~~~SGseA~e~Alklar~~~gr~~ 109 (364)
T PRK04013 41 NHPEWVEEMSEQLEKLV---VAGPMF-E-H----EEKEEMLEELSKWVNYE--YVYMGNSGTEAVEAALKFARLYTGRKE 109 (364)
T ss_pred CCHHHHHHHHHHHHhcC---CccCCc-C-C----HHHHHHHHHHHhhcCCC--EEEEeCchHHHHHHHHHHHHHHhCCCE
Confidence 47999999999887621 111111 1 1 22234557777777543 5566999999999888765 3345 88
Q ss_pred eeecCCCCCcccCccccc-----ccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC--CC-Ccc
Q 018401 136 IMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA--YA-RLY 207 (356)
Q Consensus 136 Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n--~g-~~~ 207 (356)
|++....|.+........ ++....-.-..+..+ + ..|++.+++.+.+ ++++|++.|.. .| ...
T Consensus 110 Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~--~------~~d~~~l~~~i~~-~~aAvivEpi~g~gG~~~~ 180 (364)
T PRK04013 110 IIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHI--P------FNDVEAAKEAITK-ETAAVIFEPIQGEGGIVPA 180 (364)
T ss_pred EEEECCccccCchhhccCCCCcccccCCCCCCCCcEEe--c------CCCHHHHHHHhcC-CcEEEEEcCCcCCCCCcCC
Confidence 988876655442211110 000000000001111 1 1267888888876 78888887443 34 334
Q ss_pred c---HHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCCcCCCCC-ceEEEEecCcchhccCCc
Q 018401 208 D---YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGPR-GAMIFFRKGVKEINKQGK 279 (356)
Q Consensus 208 ~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K~l~gp~-gG~l~~~~~~~~~~~~g~ 279 (356)
| +++|.++|++||+++|.|++|+ |. ..+. ...++ ..|+++++ |.++|.- -|+++.+.+
T Consensus 181 ~~~yl~~lr~lc~~~gillI~DEv~t-G~-RtG~~~a~~~~gv-~PDiv~~g--K~lggG~P~~a~~~~~~--------- 246 (364)
T PRK04013 181 KEEFVKTLRDLTEDVGALLIADEVQS-GL-RTGKFLAIEHYKV-EPDIVTMG--KGIGNGVPVSLTLTNFD--------- 246 (364)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhh-cC-CCCchhHHHhcCC-CCCEEEec--ccccCCceeEEEEeccc---------
Confidence 4 9999999999999999999986 33 2221 11111 37999987 9986532 266666652
Q ss_pred chhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhhccccccccccCCc
Q 018401 280 EVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKGRP 353 (356)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (356)
+. ......++ .-|..+.++..+.|+.++++.-.++.++. +.. ..+ ..|+|.+|+-
T Consensus 247 -----~~----~~~~~~T~-~gnp~~~aaa~a~l~~i~~~~l~~~~~~~----l~~----l~~-~~v~~vRG~G 301 (364)
T PRK04013 247 -----VE----RGKHGSTF-GGNPLACKAVAVTLRILRRERLVEKAGEK----FIE----IKG-ERVVTTRGRG 301 (364)
T ss_pred -----cc----CCCcCCCC-CcCHHHHHHHHHHHHHHHhccHHHHHHHH----HHH----hcc-CcceeeeeCc
Confidence 21 11111223 23456666677889999886545555542 111 111 4678888774
No 315
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.33 E-value=1.2e-10 Score=113.51 Aligned_cols=268 Identities=11% Similarity=0.044 Sum_probs=144.3
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchHHHHHHHHhh--cCCCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSPSNFQVYTAL--LKPHD 134 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~a~~~~l~al--~~~gd 134 (356)
-+|+|.+++.+.+.... .+... .. ..+...++.+++.+.+... .+.+.|++||++|+..+++.. ....+
T Consensus 73 ~~p~v~~ai~~q~~~~~--~~~~~--~~----~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~ 144 (443)
T PRK06058 73 SAPRVVEAVREQVARFT--HTCFM--VT----PYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQ 144 (443)
T ss_pred CCHHHHHHHHHHHHhcc--Ccccc--cc----CCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCC
Confidence 47999999999887521 01100 00 1123334567787777543 245667999999999888743 23447
Q ss_pred eeeecCCCCCcccCcccc------cccccc--cccceeeEEEecc--cCCC-CCCC--------CHHHHHHHhhhcCCcE
Q 018401 135 RIMALDLPHGGHLSHGYQ------TDTKKI--SAVSIFFETMPYR--LNES-TGYI--------DYDQLEKSATLFRPKL 195 (356)
Q Consensus 135 ~Vl~~~~~~~~~~~~~~~------~~~~~~--~~~g~~~~~v~~~--~~~~-~~~~--------d~~~l~~~i~~~~~k~ 195 (356)
+|+.....|++....... .++.+. ...+ +..++++ .+.. .... .++.+++.+...++.+
T Consensus 145 ~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAa 222 (443)
T PRK06058 145 AVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPE--VYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAA 222 (443)
T ss_pred eEEEECCCcCcChHHHHhhcCCCcccccccCCCCCC--ceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEE
Confidence 788777555444210000 001000 0111 1112211 1100 0001 1233444443236778
Q ss_pred EEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccC-C---CCCCCCCccEEEeCCCCcCCCCC-ceE
Q 018401 196 IVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG-V---IPSPFEYADVVTTTTHKSLRGPR-GAM 264 (356)
Q Consensus 196 v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~-~---~~~~l~~~D~~~~s~~K~l~gp~-gG~ 264 (356)
|++.|.. .|...+ +++|.++|++||+++|+|++++ |.-..+ . ...++ ..|+++++ |.++|.- -|+
T Consensus 223 vi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi~a 298 (443)
T PRK06058 223 VIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQT-GFARTGAWFACEHEGI-VPDLITTA--KGIAGGLPLSA 298 (443)
T ss_pred EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcChhhhHHHhcCC-CCCEEEEc--ccccCCCccEE
Confidence 8877544 344433 8999999999999999999985 321111 0 11111 26999887 9986432 377
Q ss_pred EEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhhcccc
Q 018401 265 IFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSE 344 (356)
Q Consensus 265 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (356)
++.++ ++.+.+.......++ +.|..+.++..++|+.+.++.-.++.++..-.+...+-..+.+..
T Consensus 299 v~~~~--------------~i~~~~~~~~~~~T~-~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 363 (443)
T PRK06058 299 VTGRA--------------EIMDAPHPGGLGGTY-GGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDD 363 (443)
T ss_pred EEEcH--------------HHHhhccCCCCCCCC-CCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 88777 455554432222223 345666777778899887654345555443333333333334445
Q ss_pred ccccccCCcc
Q 018401 345 NIEEDKGRPC 354 (356)
Q Consensus 345 ~~~~~~~~~~ 354 (356)
.+++.+|+.+
T Consensus 364 ~i~~vrg~G~ 373 (443)
T PRK06058 364 RIGDVRGRGA 373 (443)
T ss_pred cEEeeeccce
Confidence 6777777654
No 316
>PRK06105 aminotransferase; Provisional
Probab=99.31 E-value=2.5e-10 Score=111.51 Aligned_cols=278 Identities=12% Similarity=0.029 Sum_probs=149.1
Q ss_pred cCCeeecCC-----CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~-----~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+- ..-+|+|.+++.+.+.... .......+ ..+...++.+.+.+++..+.+.+.|++||+++
T Consensus 49 ~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~-~~~~~~~~------~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA 121 (460)
T PRK06105 49 RYIEGMAGLWSVALGFSEQRLVEAAARQMKKLP-FYHTFSHK------SHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEA 121 (460)
T ss_pred EEEEcchhHHhccCCCCCHHHHHHHHHHHHhCC-Ceeccccc------CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHH
Confidence 456665432 1348999999999887521 01111111 11222345577777775444566679999999
Q ss_pred HHHHHHhhc------C-C-CCeeeecCCCC-CcccCccccc----ccc--cccccceeeEEEecccCCCC---C------
Q 018401 122 NFQVYTALL------K-P-HDRIMALDLPH-GGHLSHGYQT----DTK--KISAVSIFFETMPYRLNEST---G------ 177 (356)
Q Consensus 122 ~~~~l~al~------~-~-gd~Vl~~~~~~-~~~~~~~~~~----~~~--~~~~~g~~~~~v~~~~~~~~---~------ 177 (356)
+.++++... . + ..+|+.....| +......... .+. +....+ +..++++..... +
T Consensus 122 ve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~ 199 (460)
T PRK06105 122 NDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDR--ILHTGCPHYYRFGLPGESEEAF 199 (460)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCC--CEEcCCCcccccccCCCChHHH
Confidence 998887642 1 2 35677665443 3332211100 000 000111 222322211000 0
Q ss_pred -CCCHHHHHHHhhh---cCCcEEEEcCC--CCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCC
Q 018401 178 -YIDYDQLEKSATL---FRPKLIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFE 244 (356)
Q Consensus 178 -~~d~~~l~~~i~~---~~~k~v~l~~~--n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~ 244 (356)
...++++++.+.. .++.+|++.|- +.|...+ +++|.++|++||+++|+|++|+ +|.... .....++
T Consensus 200 ~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v- 278 (460)
T PRK06105 200 ATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI- 278 (460)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-
Confidence 0124567777642 24677777643 3465555 8999999999999999999993 553321 1111111
Q ss_pred CccEEEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhcccc-------CCCCCCCCcHHHHHHHHHHHHH
Q 018401 245 YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV-------FPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 245 ~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~~gt~~~~~~~al~~Al~~ 315 (356)
..|+++++ |.|+|. +.|+++.++ ++.+.+.... ...++ +.|..+.++..++|+.
T Consensus 279 ~PDi~~~g--K~lggG~~P~~av~~~~--------------~i~~~~~~~~~~~~~~~h~~T~-~gnpl~~aaa~a~L~~ 341 (460)
T PRK06105 279 KPDILVMS--KQLSSSYQPLSAVLMNE--------------KVYDPIADESGKIGTFGHGFTA-SGHPVAAAVALENLAI 341 (460)
T ss_pred CCCeeeee--cccccCcccceEEEEcH--------------HHHHHHhcccccCcccccCCCC-CCCHHHHHHHHHHHHH
Confidence 27999887 999764 457777776 4554443211 01122 3345566666678999
Q ss_pred HhcccccchhhcccccchHHHHhhhccccccccccCC
Q 018401 316 VCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKGR 352 (356)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (356)
+.++.-.++.++..-.+...+... .....|++.+|+
T Consensus 342 i~~~~l~~~v~~~g~~l~~~L~~l-~~~~~v~~vrG~ 377 (460)
T PRK06105 342 IEERDLVGNAAERGARLQARLRAL-ADHPLVGEVRGV 377 (460)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEec
Confidence 987644555555444443333322 334456666665
No 317
>PRK07482 hypothetical protein; Provisional
Probab=99.30 E-value=2.1e-10 Score=112.06 Aligned_cols=282 Identities=13% Similarity=0.006 Sum_probs=149.6
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++.++-. .-+|+|.+++.+.+.... ...... .+ ..+...++.+.+.+.+..+.+.+.|++||++|
T Consensus 51 ~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~-~~~~~~-~~-----~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEA 123 (461)
T PRK07482 51 RYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELA-YYHTYV-GH-----GTEASITLSKRIIDRAPAGMSKVYYGLSGSDA 123 (461)
T ss_pred EEEEcccchhhhcCCCCCHHHHHHHHHHHHhcC-cccccc-cc-----CCHHHHHHHHHHHHhCCCCcCEEEEeCchHHH
Confidence 4566654422 238999999999887621 000000 01 11233345577777765444566679999999
Q ss_pred HHHHHHhhc------C-C-CCeeeecCCCCCccc-Cccc----ccccc--cccccceeeEEEecccCCC----C------
Q 018401 122 NFQVYTALL------K-P-HDRIMALDLPHGGHL-SHGY----QTDTK--KISAVSIFFETMPYRLNES----T------ 176 (356)
Q Consensus 122 ~~~~l~al~------~-~-gd~Vl~~~~~~~~~~-~~~~----~~~~~--~~~~~g~~~~~v~~~~~~~----~------ 176 (356)
+..+++... . + ..+|+.....|++.- .... ..++. +....+ +..++++.... +
T Consensus 124 ve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~ 201 (461)
T PRK07482 124 NETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIAR--VLHTEAPHYYRRADAGMSEEQF 201 (461)
T ss_pred HHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCC--CEEcCCCccccccccCCCHHHH
Confidence 998887542 1 2 356777665544421 1000 00000 000111 11122121000 0
Q ss_pred CCCCHHHHHHHhhh---cCCcEEEEcCCC--CCCcc----cHHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCC
Q 018401 177 GYIDYDQLEKSATL---FRPKLIVAGASA--YARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFE 244 (356)
Q Consensus 177 ~~~d~~~l~~~i~~---~~~k~v~l~~~n--~g~~~----~l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~ 244 (356)
...+++.+++.+.. .++.+|++.|.. .|.+. -+++|.++|++||+++|+|++++ +|-... .....+.
T Consensus 202 ~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv- 280 (461)
T PRK07482 202 SAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI- 280 (461)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-
Confidence 01146777887742 246777776433 34333 28899999999999999999985 332210 0111111
Q ss_pred CccEEEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhccc------cCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 245 YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA------VFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 245 ~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
..|+++++ |.|+|. +-|++++++ ++.+.+... ...+...+-|..+.++..++|+.+
T Consensus 281 ~PDiv~~g--Kgl~gG~~Pi~av~~~~--------------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~ 344 (461)
T PRK07482 281 EPDLITVA--KGLTSAYAPLSGSIVGE--------------KVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDIL 344 (461)
T ss_pred CCCEEEEc--cccccCccccceeeecH--------------HHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHH
Confidence 27999987 999654 236666666 344433211 011111234566777777889999
Q ss_pred hcccccchhhcccccchHHHHhhhccccccccccCCcc
Q 018401 317 CTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKGRPC 354 (356)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (356)
.++.-.++.++..-.+...+...+.....|++.+|+-+
T Consensus 345 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl 382 (461)
T PRK07482 345 ERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGM 382 (461)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecee
Confidence 87644455554433333333333344456777777643
No 318
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.30 E-value=4.6e-10 Score=108.62 Aligned_cols=250 Identities=14% Similarity=0.075 Sum_probs=135.3
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchH
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSP 120 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~ 120 (356)
..|++..+-. .-+|+|.+++.+.+.... +..... .. .+...++.+++.+.+.-. .+.+.|++||++
T Consensus 41 ~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~---~~~~~~-~~----~~~~~~la~~l~~~~p~~~~~~v~f~~SGse 112 (425)
T PRK07495 41 RYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFT---HTCHQV-VP----YENYVRLAERLNALVPGDFAKKTIFVTTGAE 112 (425)
T ss_pred EEEEccccHHhhccCCCCHHHHHHHHHHHhhcc---CcccCc-cC----CHHHHHHHHHHHHhCCCCCCCEEEECCchHH
Confidence 4566654322 248999999999887521 111000 11 122233557777776543 246667999999
Q ss_pred HHHHHHHhh--cCCCCeeeecCCCCCcccCccc------ccccccc--cccceeeEEEecccCCCCCC---CCHHHHHHH
Q 018401 121 SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGY------QTDTKKI--SAVSIFFETMPYRLNESTGY---IDYDQLEKS 187 (356)
Q Consensus 121 a~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~------~~~~~~~--~~~g~~~~~v~~~~~~~~~~---~d~~~l~~~ 187 (356)
++..++... .....+|+.....|++...-.. ..++.+. ...+ +..+|++.+ ..+. -+++++++.
T Consensus 113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~g~~~~~~~~~l~~~ 189 (425)
T PRK07495 113 AVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPD--VYHVPFPVE-LHGVSVEQSLAALDKL 189 (425)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCC--eEEecCCcc-cccccHHHHHHHHHHH
Confidence 999888754 2344567776654443311000 0011110 0112 233443332 1111 124556766
Q ss_pred hhh----cCCcEEEEcCC--CCCCcc----cHHHHHHHHHHcCCEEEEeccchhhhcccC-C---CCCCCCCccEEEeCC
Q 018401 188 ATL----FRPKLIVAGAS--AYARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAG-V---IPSPFEYADVVTTTT 253 (356)
Q Consensus 188 i~~----~~~k~v~l~~~--n~g~~~----~l~~I~~la~~~g~~vivD~a~~~g~~~~~-~---~~~~l~~~D~~~~s~ 253 (356)
+.. .++++|++.|. +.|... -+++|.++|++||+++|.|++|+ |.-..+ . ...+ -..|++++|
T Consensus 190 ~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~g-v~pDi~tls- 266 (425)
T PRK07495 190 FKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-GFARTGKLFAMEHHE-VAADLTTMA- 266 (425)
T ss_pred HHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-cCCcCCCceeecccC-CCCCEEeeh-
Confidence 642 25678888743 355332 38899999999999999999986 321111 1 1111 136887776
Q ss_pred CCcCCCC-CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 254 HKSLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 254 ~K~l~gp-~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
|.+++. +.|+++.++ ++.+.+........++ .+.+..++..++++++.++.-.++.+
T Consensus 267 -K~l~~G~pigav~~~~--------------~i~~~~~~~~~~~T~~-~~pl~~aaa~a~l~~l~~~~l~~~~~ 324 (425)
T PRK07495 267 -KGLAGGFPLAAVTGRA--------------EIMDAPGPGGLGGTYG-GNPLGIAAAHAVLDVIEEEDLCERAN 324 (425)
T ss_pred -hhhcCCccceEEEEcH--------------HHHhccCCCCcCCCCC-CCHHHHHHHHHHHHHHHhchHHHHHH
Confidence 988643 347788876 4555443322222333 34555666668899997653333333
No 319
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.30 E-value=3.1e-10 Score=110.87 Aligned_cols=232 Identities=14% Similarity=0.072 Sum_probs=130.9
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh--cCCCCee
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL--LKPHDRI 136 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al--~~~gd~V 136 (356)
+|+|.+++.+.+.... .+ ... .+.+.++.+.+.+.+.. .+.+.|++||++++..+++.. ....++|
T Consensus 117 ~p~v~~av~~ql~~~~--~~-----~~~----~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e~AlklAR~~tgr~~I 184 (474)
T PLN02482 117 DDEVLAALAETMKKGT--SF-----GAP----CLLENVLAEMVIDAVPS-VEMVRFVNSGTEACMGVLRLARAYTGREKI 184 (474)
T ss_pred CHHHHHHHHHHHhhCC--CC-----CCC----CHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHHHHHHHHHHhcCCCEE
Confidence 7999999999887622 11 011 12334456777777643 356777999999999888754 2344677
Q ss_pred eecCCCCCcccCccccccccc------ccccceee----EEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc--CCC
Q 018401 137 MALDLPHGGHLSHGYQTDTKK------ISAVSIFF----ETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG--ASA 202 (356)
Q Consensus 137 l~~~~~~~~~~~~~~~~~~~~------~~~~g~~~----~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k~v~l~--~~n 202 (356)
+.....|.+...........+ ....|... ..+.++. -|++.+++.+..+ ++.+|++. .++
T Consensus 185 i~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------nd~~~l~~~l~~~~~~iAavI~Epv~g~ 258 (474)
T PLN02482 185 IKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY------NDLEAVKKLFEANKGEIAAVILEPVVGN 258 (474)
T ss_pred EEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC------CChHHHHHHHHhCCCceEEEEECCCCCC
Confidence 776655444321100000000 00001000 0011111 2788898888642 45677776 344
Q ss_pred CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCCcCCCCC-ceEEEEecCcch
Q 018401 203 YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGPR-GAMIFFRKGVKE 273 (356)
Q Consensus 203 ~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K~l~gp~-gG~l~~~~~~~~ 273 (356)
.|.+.| +++|.++|++||+++|+|++| .|. ..+. ...++ ..|+++++ |.++|.- -|++..++
T Consensus 259 ~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGf-R~g~~ga~~~~gv-~PDi~t~g--K~lggG~Pigav~g~~---- 329 (474)
T PLN02482 259 SGFIVPKKEFLEGLREITKENGALLVFDEVM-TGF-RIAYGGAQEYFGI-TPDLTTLG--KVIGGGLPVGAYGGRR---- 329 (474)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCe-ecCcchHhHHhCC-CCCEEEec--chhhCCCceEEEEEcH----
Confidence 565444 678999999999999999999 454 2211 00111 36888776 9997532 25567776
Q ss_pred hccCCcchhhhHHHhhccccCCCCCCC--CcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 274 INKQGKEVFYDYEEKINQAVFPGLQGG--PHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 274 ~~~~g~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
++.+.+.........+| .+.+.+++..++|+.+.++..++++++
T Consensus 330 ----------ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~ 375 (474)
T PLN02482 330 ----------EIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDK 375 (474)
T ss_pred ----------HHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 55555532110011233 355667777788999976544444443
No 320
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.29 E-value=1.6e-10 Score=110.23 Aligned_cols=242 Identities=13% Similarity=0.134 Sum_probs=132.4
Q ss_pred cCCeeecCC-----CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCc-cccCCCchH
Q 018401 47 KGLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEK-WGGSLSGSP 120 (356)
Q Consensus 47 ~~i~L~~~~-----~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~-v~v~~sgs~ 120 (356)
..|++..+- .. +|+|++++.+.+.... .++.. ....++ +.+++.+...+.. +.|++||++
T Consensus 30 ~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~--~~~~~-------~~~~~~----~~la~~l~~~~~~~~~~~~SGse 95 (375)
T PRK04260 30 KYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIW--HSPNL-------YLNSLQ----EEVAQKLIGDKDYLAFFCNSGAE 95 (375)
T ss_pred EEEECCCCcccccCCC-CHHHHHHHHHHHHhcC--cccCc-------cCCHHH----HHHHHHHhcCcCCEEEEcCccHH
Confidence 356665442 23 7889999999886522 12211 112333 4444443333333 355999999
Q ss_pred HHHHHHHhh--cCCCCeeeecCCC-CCcccCcccccccccc-cccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEE
Q 018401 121 SNFQVYTAL--LKPHDRIMALDLP-HGGHLSHGYQTDTKKI-SAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 196 (356)
Q Consensus 121 a~~~~l~al--~~~gd~Vl~~~~~-~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v 196 (356)
++..+++.. ...+++|++.+.. |++............. ...+..+..++ .. ...|++.+++.+.+ ++++|
T Consensus 96 A~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~dl~~l~~~l~~-~~a~v 169 (375)
T PRK04260 96 ANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFS--YA---IFNDLNSVKALVNK-NTAAV 169 (375)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeE--Ee---CCCCHHHHHHhcCC-CeEEE
Confidence 999877765 3456778777654 4433322110000000 00010010011 00 12488999988865 77788
Q ss_pred EEc-CCC-CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccC-CC---CCCCCCccEEEeCCCCcCC-CCCceEE
Q 018401 197 VAG-ASA-YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG-VI---PSPFEYADVVTTTTHKSLR-GPRGAMI 265 (356)
Q Consensus 197 ~l~-~~n-~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~-~~---~~~l~~~D~~~~s~~K~l~-gp~gG~l 265 (356)
++. ..+ +|...+ +++|.++|+++|+++|+|++|. |.-..+ .. ..++ ..|++++ +|.|+ |-+.|++
T Consensus 170 i~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~-~pdi~t~--sK~l~~G~~ig~~ 245 (375)
T PRK04260 170 MLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGI-EPDIFTL--AKGLANGVPVGAM 245 (375)
T ss_pred EECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCC-CCCEEEe--cccccCCcceEEE
Confidence 887 333 565543 8999999999999999999985 432221 10 1111 2577654 59986 3345888
Q ss_pred EEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 266 FFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
+.++ ++.+.+........+ +.+.+..++..++++.+..+...++.++
T Consensus 246 ~~~~--------------~~~~~~~~~~~~~t~-~~~~~~~~aa~a~l~~~~~~~~~~~~~~ 292 (375)
T PRK04260 246 LAKS--------------SLGGAFGYGSHGSTF-GGNKLSMAAASATLDIMLTAGFLEQALE 292 (375)
T ss_pred EEcH--------------HHHhhcCCCCCCCCC-CcCHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 8877 455554432222222 3345566777778888765432334343
No 321
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.28 E-value=3.4e-10 Score=110.17 Aligned_cols=267 Identities=14% Similarity=0.044 Sum_probs=140.3
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCC-CccccCCCchHHHHHHHHhh--cCCCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP-EKWGGSLSGSPSNFQVYTAL--LKPHD 134 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~-~~v~v~~sgs~a~~~~l~al--~~~gd 134 (356)
-+|+|.+++.+.+.... +....++ .+ +...++.+.+++.+.... +.+.|++||++++..+++.. .....
T Consensus 59 ~~p~v~~Ai~~ql~~~~---~~~~~~~-~~----~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~ 130 (445)
T PRK08593 59 APPRVVEAIKAQADKFI---HYTPAYM-YH----EPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRP 130 (445)
T ss_pred CCHHHHHHHHHHHHhcc---Ccccccc-CC----HHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCC
Confidence 48999999999887521 1111111 11 223345577887775432 46677999999999888753 22335
Q ss_pred eeeecCCCCCcc-cCccccc-----ccc--cccccceeeEEEecccCCC--CCCCC-------HHHHHHHhhh----cCC
Q 018401 135 RIMALDLPHGGH-LSHGYQT-----DTK--KISAVSIFFETMPYRLNES--TGYID-------YDQLEKSATL----FRP 193 (356)
Q Consensus 135 ~Vl~~~~~~~~~-~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~--~~~~d-------~~~l~~~i~~----~~~ 193 (356)
+|+.....|.+. ....... .+. .....| +..+|++.... ....+ ++++++.+.+ .++
T Consensus 131 ~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 208 (445)
T PRK08593 131 YIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPG--FVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEV 208 (445)
T ss_pred eEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCC--cEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCce
Confidence 566665444332 2111000 000 011112 22233221100 00011 2445544431 256
Q ss_pred cEEEEcCC--CCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCCCCcCCC-CCce
Q 018401 194 KLIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRG-PRGA 263 (356)
Q Consensus 194 k~v~l~~~--n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~~K~l~g-p~gG 263 (356)
.+|++.|. +.|...+ +++|.++|++||+++|+|++|+ +|..... ....+. ..|+++++ |.+++ -+.|
T Consensus 209 AavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~t~g--K~l~~G~p~g 285 (445)
T PRK08593 209 ACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLMSFG--KSLAGGMPMS 285 (445)
T ss_pred EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEeeec--ccccCCcccE
Confidence 77777643 2455544 8999999999999999999984 3321100 011111 26888776 99864 3457
Q ss_pred EEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhhccc
Q 018401 264 MIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS 343 (356)
Q Consensus 264 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (356)
+++.++ ++.+.+........+ ..+....++..++++.+.++.-.++.+.....+...+-..+...
T Consensus 286 av~~~~--------------~i~~~~~~~~~~~T~-~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~ 350 (445)
T PRK08593 286 AIVGRK--------------EIMESLEAPAHLFTT-GANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKY 350 (445)
T ss_pred EEEEcH--------------HHHhhhccCCCCCCC-CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 888877 455554321111122 34456677777889999775434444433332223232223334
Q ss_pred cccccccCC
Q 018401 344 ENIEEDKGR 352 (356)
Q Consensus 344 ~~~~~~~~~ 352 (356)
..|++.+|+
T Consensus 351 ~~v~~vrG~ 359 (445)
T PRK08593 351 NFVGDVRGY 359 (445)
T ss_pred CcEEEEecc
Confidence 556666665
No 322
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.27 E-value=5.5e-10 Score=108.10 Aligned_cols=244 Identities=12% Similarity=0.077 Sum_probs=136.4
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+-. .-+|+|.+++.+.+.... .+ . ..+ +.+.++.+.+.+.++...+.+.|++||+++
T Consensus 54 ~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~----~-~~~----~~~~~la~~L~~~~~~~~~~v~f~~SGsEA 122 (433)
T PRK00615 54 TFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT--SY----G-LTS----EQEILFAEELFSYLGLEDHKIRFVSSGTEA 122 (433)
T ss_pred EEEEcccchhccccCCCCHHHHHHHHHHHHhCC--CC----C-CCC----HHHHHHHHHHHHhCCCCcCEEEEeCchHHH
Confidence 4566654322 248999999999887521 10 0 111 223345577777775443466779999999
Q ss_pred HHHHHHhh--cCCCCeeeecCCCCCcccCc-ccccccccc------ccccee---eEEEecccCCCCCCCCHHHHHHHhh
Q 018401 122 NFQVYTAL--LKPHDRIMALDLPHGGHLSH-GYQTDTKKI------SAVSIF---FETMPYRLNESTGYIDYDQLEKSAT 189 (356)
Q Consensus 122 ~~~~l~al--~~~gd~Vl~~~~~~~~~~~~-~~~~~~~~~------~~~g~~---~~~v~~~~~~~~~~~d~~~l~~~i~ 189 (356)
+..+++.. .....+|+.....|.+.... ...+...+. ...+.. ...+.++ .-|++++++.+.
T Consensus 123 ~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~ 196 (433)
T PRK00615 123 TMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLP------YNDFQIFQTVMN 196 (433)
T ss_pred HHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCC------CCCHHHHHHHHH
Confidence 99888754 22345677666544443211 000000000 000000 0001001 126888888885
Q ss_pred hc--CCcEEEEc--CCCCCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCCcC
Q 018401 190 LF--RPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSL 257 (356)
Q Consensus 190 ~~--~~k~v~l~--~~n~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K~l 257 (356)
.. ++.+|++. .++.|...| +++|.++|++||+++|+|++|. |. ..+. ...++ ..|+++++ |.+
T Consensus 197 ~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~-R~G~~ga~~~~gv-~PDi~~~g--K~l 271 (433)
T PRK00615 197 SLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GF-RVAQGGAAAIYHV-KPDITVYG--KIL 271 (433)
T ss_pred hcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-cc-cccHhHHHHhcCC-CCCeEEEc--ccc
Confidence 32 45677776 344565555 5699999999999999999994 44 1111 11111 36888865 999
Q ss_pred CC-CCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCC--CcHHHHHHHHHHHHHHhcccccchhh
Q 018401 258 RG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGG--PHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 258 ~g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
+| -++|++++++ ++.+.+.........+| .+...+++..++|+.+.++..+++.+
T Consensus 272 ggG~p~~av~~~~--------------~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~ 329 (433)
T PRK00615 272 GGGLPAAAVVAHK--------------SIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLS 329 (433)
T ss_pred cCCcceeeeeecH--------------HHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHH
Confidence 74 3468888877 45555432111111233 35667788888999987653344443
No 323
>PRK05965 hypothetical protein; Provisional
Probab=99.27 E-value=3e-10 Score=110.97 Aligned_cols=280 Identities=12% Similarity=0.040 Sum_probs=148.3
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+-. .-+|+|.+++.+.+.... +....+... .+...++.+.+.+.+..+.+.+.|++||++|
T Consensus 47 ~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~---~~~~~~~~~----~~~~~~lae~L~~~~p~~~~~v~f~~sGSEA 119 (459)
T PRK05965 47 QLLDAFAGLWCVNVGYGQESIVEAAAEQMRELP---YATGYFHFG----SEPAIRLAAKLAERAPGSLNHVYFTLGGSDA 119 (459)
T ss_pred EEEECcccHHhccCCCCCHHHHHHHHHHHHhcC---CcccccccC----CHHHHHHHHHHHhhCCCCcCEEEEeCChhHH
Confidence 4566654322 238999999999887521 111100001 1222345577777764344566679999999
Q ss_pred HHHHHHhhc------C-C-CCeeeecCCCCCcccCc-----ccccccc--cccccceeeEEEecccCCC-CCCCC-----
Q 018401 122 NFQVYTALL------K-P-HDRIMALDLPHGGHLSH-----GYQTDTK--KISAVSIFFETMPYRLNES-TGYID----- 180 (356)
Q Consensus 122 ~~~~l~al~------~-~-gd~Vl~~~~~~~~~~~~-----~~~~~~~--~~~~~g~~~~~v~~~~~~~-~~~~d----- 180 (356)
+..+++... . + ..+|+.....|++.-.. +...++. +....+ ...++.+.... ....|
T Consensus 120 ve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 197 (459)
T PRK05965 120 VDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPW--QHKIPSPYPYRNPVGDDPQAII 197 (459)
T ss_pred HHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCC--CEEcCCCcccccccCCChHHHH
Confidence 998887532 1 2 35688776555443210 0000010 100111 12232221100 00112
Q ss_pred ---HHHHHHHhhh---cCCcEEEEcCCC--CCCcc----cHHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCCC
Q 018401 181 ---YDQLEKSATL---FRPKLIVAGASA--YARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEY 245 (356)
Q Consensus 181 ---~~~l~~~i~~---~~~k~v~l~~~n--~g~~~----~l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~~ 245 (356)
++++++.+.. .++.+|++.|-. .|... -+++|.++|++||+++|+|++++ +|-... .....+. .
T Consensus 198 ~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~ 276 (459)
T PRK05965 198 AASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGV-V 276 (459)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCC-C
Confidence 3567777753 246777776433 34333 28899999999999999999985 332210 1111111 3
Q ss_pred ccEEEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhccc------cCCCCCCCCcHHHHHHHHHHHHHHh
Q 018401 246 ADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA------VFPGLQGGPHNHTITGLAVALKQVC 317 (356)
Q Consensus 246 ~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~gt~~~~~~~al~~Al~~~~ 317 (356)
.|+++++ |.|+|. +-|++++++ ++.+.+... ...+...+-|..+.++..++|+.+.
T Consensus 277 PDiv~~g--Kgl~gG~~Pi~av~~~~--------------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~ 340 (459)
T PRK05965 277 PDLMTVA--KGLTSGYVPMGAVLMSD--------------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYH 340 (459)
T ss_pred CCeEEec--hhhccCCcceeEEEEcH--------------HHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHH
Confidence 7999998 999765 237777777 444443221 1111122345566777778899998
Q ss_pred cccccchhhcccccchHHHHhhhccccccccccCCc
Q 018401 318 TLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKGRP 353 (356)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (356)
++.-.++.++..-.+...+-..+ ....|++.+|+-
T Consensus 341 ~~~l~~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~G 375 (459)
T PRK05965 341 EGGLLANGQKAGPRFAAGLDALR-AHPLVGDVRGRG 375 (459)
T ss_pred hccHHHHHHHHHHHHHHHHHhhc-cCCCEEEEeecc
Confidence 76545555544433333333323 244677777664
No 324
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.27 E-value=3.9e-10 Score=109.94 Aligned_cols=267 Identities=12% Similarity=0.061 Sum_probs=142.9
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh--cCCCCe
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL--LKPHDR 135 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al--~~~gd~ 135 (356)
-+|+|.+++.+.+.... +....+ ..+ +...++.+.+.+.+....+.+.|++||++|+..+++.. .....+
T Consensus 70 ~~p~i~~Ai~~ql~~~~---~~~~~~-~~~----~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ 141 (457)
T PRK05639 70 SHPKLVKAVQEQVALIQ---HSMIGY-THS----ERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPW 141 (457)
T ss_pred CCHHHHHHHHHHHHhcc---ccccCc-cCC----HHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCe
Confidence 48999999999887521 111111 111 22234557777776644456677999999999888754 234456
Q ss_pred eeecCCCCCcccCcccc------ccccc--ccccceeeEEEecccCCC-----CCCCCH--------HHHHHHhh-----
Q 018401 136 IMALDLPHGGHLSHGYQ------TDTKK--ISAVSIFFETMPYRLNES-----TGYIDY--------DQLEKSAT----- 189 (356)
Q Consensus 136 Vl~~~~~~~~~~~~~~~------~~~~~--~~~~g~~~~~v~~~~~~~-----~~~~d~--------~~l~~~i~----- 189 (356)
|+.....|.+....... .++.+ ....+ +..+|++.... +...|. +.+++.+.
T Consensus 142 ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~ 219 (457)
T PRK05639 142 ILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPN--VVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVP 219 (457)
T ss_pred EEEECCCcCCccHHHHHHcCCCcccccCCCCCCCC--ceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 77766444432110000 00100 00111 23343331100 000122 23554442
Q ss_pred hcCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCCcCCC
Q 018401 190 LFRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRG 259 (356)
Q Consensus 190 ~~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K~l~g 259 (356)
..++.+|++.|-. .|.+.| +++|.++|++||+++|+|++|+ |.-..+. ...++ ..|+++++ |.++|
T Consensus 220 ~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv-~PDiv~~g--K~l~g 295 (457)
T PRK05639 220 PDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-GIGRTGKWFASEWFEV-KPDLIIFG--KGVAS 295 (457)
T ss_pred CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcCchHHHHHhcCC-CCCEEEec--hhhcC
Confidence 2356778886433 343332 8899999999999999999996 4211111 11111 37999975 99975
Q ss_pred CCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHh
Q 018401 260 PRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVS 338 (356)
Q Consensus 260 p~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (356)
..+ |+++.++ ++.+..... ...+++ .+....++..++|+.+.++...++.+...-.+...+-.
T Consensus 296 G~pi~av~~~~--------------~i~~~~~~~-~~~T~~-g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~ 359 (457)
T PRK05639 296 GMGLSGVIGRK--------------ELMDLTSGS-ALLTPA-ANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLE 359 (457)
T ss_pred CCcceeEEehH--------------HHHhhcCCC-cccCCC-cCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHH
Confidence 455 8888877 444421111 112223 34555677778899997764445555433333333333
Q ss_pred hhccccccccccCCcc
Q 018401 339 NQNNSENIEEDKGRPC 354 (356)
Q Consensus 339 ~~~~~~~~~~~~~~~~ 354 (356)
.+.....+++.+|+-+
T Consensus 360 l~~~~~~~~~VrG~Gl 375 (457)
T PRK05639 360 MKESFEVIGDVRGKGL 375 (457)
T ss_pred HHHhCCCEEeecccee
Confidence 3344567788877754
No 325
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.27 E-value=4e-10 Score=109.07 Aligned_cols=243 Identities=10% Similarity=0.007 Sum_probs=131.4
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC-CCCccccCCCchHHHHHHHHhh--cCCCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGGSLSGSPSNFQVYTAL--LKPHD 134 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~v~v~~sgs~a~~~~l~al--~~~gd 134 (356)
-+|+|.+++.+.+.... +.....+ . .+...++.+.+.+.... ..+.+.|++||++|+..++... .....
T Consensus 57 ~~p~v~~ai~~ql~~~~---~~~~~~~-~----~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~ 128 (421)
T PRK09792 57 RHPDLVAAVEQQLQQFT---HTAYQIV-P----YESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRP 128 (421)
T ss_pred CCHHHHHHHHHHHHhcc---CcccCcc-C----CHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCC
Confidence 48999999999887521 1111000 1 12223455667776643 2246677889999999887754 23345
Q ss_pred eeeecCCCCCcccCcccc------cccccccccceeeEEEecccCCCCC--CCCHHHHHHHhhh----cCCcEEEEcCCC
Q 018401 135 RIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLNESTG--YIDYDQLEKSATL----FRPKLIVAGASA 202 (356)
Q Consensus 135 ~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~~~~~--~~d~~~l~~~i~~----~~~k~v~l~~~n 202 (356)
+|+.....|.+....... .++.+....-..+..+|++.+.... .-+++.+++.+.+ .++++|++.|..
T Consensus 129 ~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq 208 (421)
T PRK09792 129 GVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQ 208 (421)
T ss_pred eEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEcccc
Confidence 677766544433210000 0011100000112334444321100 1235778887752 357788887443
Q ss_pred --CCCc-cc---HHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCCCccEEEeCCCCcCCCC-CceEEEEecCcc
Q 018401 203 --YARL-YD---YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLRGP-RGAMIFFRKGVK 272 (356)
Q Consensus 203 --~g~~-~~---l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~~~D~~~~s~~K~l~gp-~gG~l~~~~~~~ 272 (356)
.|.. .| +++|.++|++||+++|+|++++ +|.... .....+ ...|+++++ |.|++. +-|+++.++
T Consensus 209 ~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~-~~pDi~t~g--K~l~~G~pigav~~~~--- 282 (421)
T PRK09792 209 GEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYA-DKPDLMTMA--KSLAGGMPLSGVVGNA--- 282 (421)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcC-CCCcEEEee--hhhcCCCceEEEEEcH---
Confidence 5533 35 8899999999999999999985 222110 011111 136887775 998643 337788876
Q ss_pred hhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 273 EINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
++.+.+........++ .|....++..++++++.++.-.++.+
T Consensus 283 -----------~i~~~~~~~~~~~T~~-gnpl~~aaa~a~l~~l~~~~~~~~~~ 324 (421)
T PRK09792 283 -----------NIMDAPAPGGLGGTYA-GNPLAVAAAHAVLNIIDKESLCERAN 324 (421)
T ss_pred -----------HHHhccCCCCcCCCCC-CCHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 4555443322222333 34455666667888887653334444
No 326
>PRK06541 hypothetical protein; Provisional
Probab=99.27 E-value=4.5e-10 Score=109.69 Aligned_cols=254 Identities=11% Similarity=0.042 Sum_probs=133.6
Q ss_pred cCCeeecCC-----CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~-----~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+- ..-+|.|.+++.+.+.... +.....+ .+ +...++.+++.+.+..+.+.+.|++||+++
T Consensus 53 ~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~---~~~~~~~-~~----~~~~~la~~l~~~~p~~~~~v~f~~sGseA 124 (460)
T PRK06541 53 RYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLA---FFPLWSY-AH----PPAIELAERLAALAPGDLNRVFFTTGGSEA 124 (460)
T ss_pred EEEECCccHHhccCCCCCHHHHHHHHHHHhhCc---Ccccccc-CC----HHHHHHHHHHHHhCCCCcCEEEEcCCcHHH
Confidence 456665432 1247999999999887521 1111001 11 222345577777765444566679999999
Q ss_pred HHHHHHhhc-----C---CCCeeeecCCCCCcccCccccc-----ccc--cccccceeeEEEecccCCC--CCCCC----
Q 018401 122 NFQVYTALL-----K---PHDRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNES--TGYID---- 180 (356)
Q Consensus 122 ~~~~l~al~-----~---~gd~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~--~~~~d---- 180 (356)
+..++.... . ...+|+.....|.+........ ++. .....| +..+|.+.... .+.-+
T Consensus 125 ve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~ 202 (460)
T PRK06541 125 VESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPG--GFRVPNTNFYRAPELGDDPEAF 202 (460)
T ss_pred HHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCC--cEEeCCCccccccccCCCHHHH
Confidence 998776432 1 2466777665443332111100 000 001112 22232221000 00011
Q ss_pred ----HHHHHHHhhh---cCCcEEEEcC--CCCCCccc----HHHHHHHHHHcCCEEEEeccc-hhhhcccC--CCCCCCC
Q 018401 181 ----YDQLEKSATL---FRPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAH-ISGLVAAG--VIPSPFE 244 (356)
Q Consensus 181 ----~~~l~~~i~~---~~~k~v~l~~--~n~g~~~~----l~~I~~la~~~g~~vivD~a~-~~g~~~~~--~~~~~l~ 244 (356)
++.+++.+.. .++.+|++.| ++.|.+.+ +++|.++|++||+++|+|++| ++|..... ....++
T Consensus 203 ~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv- 281 (460)
T PRK06541 203 GRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY- 281 (460)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-
Confidence 3667777752 2355666654 23566666 999999999999999999999 45532211 111111
Q ss_pred CccEEEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhccccC---CCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 245 YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVF---PGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 245 ~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
..|+++++ |.|++. +-|+++.++ ++.+.+..... .......+...+++..++++.+.++
T Consensus 282 ~PDivt~g--K~l~~G~~pigav~~~~--------------~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~ 345 (460)
T PRK06541 282 VPDIITCA--KGITSGYSPLGAMIASD--------------RLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFERE 345 (460)
T ss_pred CCCEEEec--ccccCCccceeEEEEcH--------------HHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 26888865 999753 236666666 34444332111 1111223446667777889888765
Q ss_pred cccchhhc
Q 018401 320 ITFSHIHV 327 (356)
Q Consensus 320 ~~~~~~~~ 327 (356)
.-.++.++
T Consensus 346 ~~~~~~~~ 353 (460)
T PRK06541 346 GLLDHVRD 353 (460)
T ss_pred cHHHHHHH
Confidence 33344443
No 327
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.26 E-value=4.1e-10 Score=108.90 Aligned_cols=265 Identities=11% Similarity=0.022 Sum_probs=140.0
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------- 130 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------- 130 (356)
-+|+|.+++.+.+.... ...... ..+ +...++.+++++++....+.+.|++||++++..+++...
T Consensus 60 ~~p~i~~Ai~~q~~~~~-~~~~~~---~~~----~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g 131 (428)
T PRK07986 60 NHPQLNAAMKSQIDAMS-HVMFGG---ITH----PPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKG 131 (428)
T ss_pred CCHHHHHHHHHHHhhcC-Cccccc---cCC----HHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcC
Confidence 47999999998887521 011100 011 223345577777765444566679999999998877542
Q ss_pred CCCCeeeecCCCCCccc-Cccccc-----ccc--cccccceeeEEEecccCCC--CC-CCCHHHHHHHhhhc--CCcEEE
Q 018401 131 KPHDRIMALDLPHGGHL-SHGYQT-----DTK--KISAVSIFFETMPYRLNES--TG-YIDYDQLEKSATLF--RPKLIV 197 (356)
Q Consensus 131 ~~gd~Vl~~~~~~~~~~-~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~--~~-~~d~~~l~~~i~~~--~~k~v~ 197 (356)
....+|+.....|.+.. ...... ++. .....+ ...++.+.... .. .-|++++++.+... ++.+|+
T Consensus 132 ~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi 209 (428)
T PRK07986 132 EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPE--NLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVI 209 (428)
T ss_pred CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCC--CEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEE
Confidence 23467887765544321 111000 000 000011 11222221100 00 23567888877531 455666
Q ss_pred EcC--CCC-CCc----ccHHHHHHHHHHcCCEEEEeccchhhhcccC-C---CCCCCCCccEEEeCCCCcCCCC--CceE
Q 018401 198 AGA--SAY-ARL----YDYERIRKVCNKQKAIMLADMAHISGLVAAG-V---IPSPFEYADVVTTTTHKSLRGP--RGAM 264 (356)
Q Consensus 198 l~~--~n~-g~~----~~l~~I~~la~~~g~~vivD~a~~~g~~~~~-~---~~~~l~~~D~~~~s~~K~l~gp--~gG~ 264 (356)
+.| ... |.. ..+++|.++|++||+++|+|++| .|.-..+ . ...+. ..|+++++ |.|+|. +.|+
T Consensus 210 ~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv-~PDi~t~g--K~l~gG~~p~~a 285 (428)
T PRK07986 210 LEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TGFGRTGKLFACEHAGI-APDILCLG--KALTGGTMTLSA 285 (428)
T ss_pred EechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCCeeeecccCC-CCCEEEec--hhhhCCcccCcc
Confidence 654 233 322 33899999999999999999999 4431111 1 11111 36888765 998643 3366
Q ss_pred EEEecCcchhccCCcchhhhHHHhhcccc-----CCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhh
Q 018401 265 IFFRKGVKEINKQGKEVFYDYEEKINQAV-----FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSN 339 (356)
Q Consensus 265 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (356)
+++++ ++.+.+.... ....+ +.|....++..++|+.+.++.-.++.++........+...
T Consensus 286 v~~~~--------------~i~~~~~~~~~~~~~~~~T~-~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l 350 (428)
T PRK07986 286 TLTTR--------------EVAETISNGEAGCFMHGPTF-MGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPL 350 (428)
T ss_pred hhchH--------------HHHHHhhcCCCCccccCCCC-CcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 66666 4555543311 11222 3456777777788999976533344443332222222211
Q ss_pred hccccccccccCC
Q 018401 340 QNNSENIEEDKGR 352 (356)
Q Consensus 340 ~~~~~~~~~~~~~ 352 (356)
+ ....|++.+|+
T Consensus 351 ~-~~~~i~~vRg~ 362 (428)
T PRK07986 351 R-DAPMVADVRVL 362 (428)
T ss_pred h-cCCCEEeEecc
Confidence 2 23456776665
No 328
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.25 E-value=6.3e-10 Score=107.90 Aligned_cols=246 Identities=12% Similarity=0.068 Sum_probs=135.4
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+-. .-+|+|.+++.+.+......+ ..+ +...++.+++.+.+. ..+.+.|++||+++
T Consensus 54 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-------~~~----~~~~~la~~l~~~~p-~~~~v~f~~sGseA 121 (428)
T PRK12389 54 KYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYG-------TPT----ELEIEFAKMLKEAIP-SLEKVRFVNSGTEA 121 (428)
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCCccC-------CCC----HHHHHHHHHHHHhCC-CCcEEEEeCCHHHH
Confidence 4566654433 237999999999887521001 111 222345577766664 23466679999999
Q ss_pred HHHHHHhh--cCCCCeeeecCCCCCcccCccccccccc-c-----ccccee----eEEEecccCCCCCCCCHHHHHHHhh
Q 018401 122 NFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKK-I-----SAVSIF----FETMPYRLNESTGYIDYDQLEKSAT 189 (356)
Q Consensus 122 ~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~-~-----~~~g~~----~~~v~~~~~~~~~~~d~~~l~~~i~ 189 (356)
+..+++.. .....+|+.....|.+............ . ...+.. ...+.++ ..|++.+++.+.
T Consensus 122 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~ 195 (428)
T PRK12389 122 VMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVP------FNDIEALKEALD 195 (428)
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcC------CCCHHHHHHHHH
Confidence 99888754 2344667776654444321100000000 0 000000 0001111 127888888886
Q ss_pred hc--CCcEEEEcC--CCCCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccC--CCCCCCCCccEEEeCCCCcCCC
Q 018401 190 LF--RPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG--VIPSPFEYADVVTTTTHKSLRG 259 (356)
Q Consensus 190 ~~--~~k~v~l~~--~n~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~--~~~~~l~~~D~~~~s~~K~l~g 259 (356)
+. ++.+|++.| .+.|.+.| +++|.++|++||+++|+|++|+..-.... ....+. ..|+++++ |.++|
T Consensus 196 ~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv-~PDivt~g--K~lgg 272 (428)
T PRK12389 196 KWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGV-EPDLTALG--KIIGG 272 (428)
T ss_pred hcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCC-CCCeeeec--hhhcC
Confidence 32 456677763 33566666 99999999999999999999863211111 001111 36988776 99965
Q ss_pred CC-ceEEEEecCcchhccCCcchhhhHHHhhccc--cCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 260 PR-GAMIFFRKGVKEINKQGKEVFYDYEEKINQA--VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 260 p~-gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
.- -|+++.++ ++.+.+... ...+..-+.|....++..++|+.+.++.-.++.++
T Consensus 273 G~Pi~av~~~~--------------~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~ 329 (428)
T PRK12389 273 GLPIGAYGGRK--------------DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDR 329 (428)
T ss_pred CCceeEEeEHH--------------HHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 32 26667776 455544321 11111113455667777788999976543444443
No 329
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.24 E-value=9.8e-10 Score=106.86 Aligned_cols=265 Identities=14% Similarity=0.052 Sum_probs=139.3
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchHHHHHHHHhh--cCCCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSPSNFQVYTAL--LKPHD 134 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~a~~~~l~al--~~~gd 134 (356)
-+|+|.+++.+.+.... +.....+ ..+...++.+.+.+.+... .+.+.|++||++|+..+++.. ....+
T Consensus 71 ~~p~v~~Ai~~ql~~~~---~~~~~~~-----~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~ 142 (441)
T PRK05769 71 AHPKVVKAVKEQAEKFL---HYSLTDF-----YYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRK 142 (441)
T ss_pred CCHHHHHHHHHHHHhcc---CccCccc-----CCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCC
Confidence 37999999999887521 1111000 1123345567777776532 246667999999999888754 23346
Q ss_pred eeeecCCCCCccc-Cccc-----ccccc--cccccceeeEEEecccCC------CCC----CCCHHHHHHHh-h----hc
Q 018401 135 RIMALDLPHGGHL-SHGY-----QTDTK--KISAVSIFFETMPYRLNE------STG----YIDYDQLEKSA-T----LF 191 (356)
Q Consensus 135 ~Vl~~~~~~~~~~-~~~~-----~~~~~--~~~~~g~~~~~v~~~~~~------~~~----~~d~~~l~~~i-~----~~ 191 (356)
+|+.....|.+.. .... ...+. .....| +..++++... .+. .-+++.+++.+ . ..
T Consensus 143 ~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~ 220 (441)
T PRK05769 143 YIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPG--VIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPE 220 (441)
T ss_pred eEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCC--eEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCC
Confidence 6777664443322 1100 00000 011112 2223322100 000 01234455522 2 12
Q ss_pred CCcEEEEcC--CCCCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCCcCCCCC
Q 018401 192 RPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGPR 261 (356)
Q Consensus 192 ~~k~v~l~~--~n~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K~l~gp~ 261 (356)
++.+|++.| ++.|...+ +++|.++|++||+++|+|++|+ |.-..+. ...++ ..|+++++ |.+++..
T Consensus 221 ~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv-~pDivt~~--K~l~~G~ 296 (441)
T PRK05769 221 EVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGV-EPDIITLA--KAIAGGL 296 (441)
T ss_pred ceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCC-CCCEEEEc--ccccCCc
Confidence 466777763 33567666 9999999999999999999997 3211111 11121 25898876 9886533
Q ss_pred -ceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhh
Q 018401 262 -GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQ 340 (356)
Q Consensus 262 -gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (356)
.|+++.++ ++.+... ......++. +....++..++|+.+.+ .-.++.++........+-..+
T Consensus 297 p~gav~~~~--------------~i~~~~~-~~~~~T~~g-~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~ 359 (441)
T PRK05769 297 PLGAVIGRA--------------ELMFLPP-GSHANTFGG-NPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELK 359 (441)
T ss_pred ccEEEEEeh--------------hhhhcCC-CCCCCCCCc-CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 37777777 3333221 111222333 55666777788998876 444555543333323232223
Q ss_pred ccccccccccCCc
Q 018401 341 NNSENIEEDKGRP 353 (356)
Q Consensus 341 ~~~~~~~~~~~~~ 353 (356)
.+...+++.+|+.
T Consensus 360 ~~~~~~~~vrg~G 372 (441)
T PRK05769 360 EKYEFIGDVRGLG 372 (441)
T ss_pred HhCCCeeeeecce
Confidence 3344566666653
No 330
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.24 E-value=8.5e-10 Score=107.54 Aligned_cols=278 Identities=8% Similarity=-0.015 Sum_probs=148.6
Q ss_pred cCCeeecC-----CCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPS-----ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~-----~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+ -..-+|+|.+++.+.+.... ...... ..+ +...++.+.+.+.++...+.+.|++||+++
T Consensus 55 ~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~-~~~~~~---~~~----~~~~~lAe~L~~~~p~~~~~v~f~~sGseA 126 (453)
T PRK06943 55 RYLDAISSWWVNLFGHANPRINAALKDQLDTLE-HAMLAG---CTH----EPAIELAERLAALTGGTLGHAFFASDGASA 126 (453)
T ss_pred EEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcC-Cccccc---cCC----HHHHHHHHHHHHhCCCCCCEEEEeCCCHHH
Confidence 45666433 12348999999999887521 011100 111 223345577777776443466679999999
Q ss_pred HHHHHHhhc-------C-CCCeeeecCCCCCccc-Cccccc----ccc--cccccceeeEEEecccCCC--CC-------
Q 018401 122 NFQVYTALL-------K-PHDRIMALDLPHGGHL-SHGYQT----DTK--KISAVSIFFETMPYRLNES--TG------- 177 (356)
Q Consensus 122 ~~~~l~al~-------~-~gd~Vl~~~~~~~~~~-~~~~~~----~~~--~~~~~g~~~~~v~~~~~~~--~~------- 177 (356)
+..+++... . ...+|+.....|.+.. ...... ++. ...+.+ +..++.+.... ..
T Consensus 127 ve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~ 204 (453)
T PRK06943 127 VEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRH--AHVVASPDARGARPGETAADVA 204 (453)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCC--CEEECCCCccccccCCCHHHHH
Confidence 998887641 1 2356877765554432 100000 000 000111 11233221100 00
Q ss_pred CCCHHHHHHHhhh--cCCcEEEEcCC-C--CCCcc----cHHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCC
Q 018401 178 YIDYDQLEKSATL--FRPKLIVAGAS-A--YARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEY 245 (356)
Q Consensus 178 ~~d~~~l~~~i~~--~~~k~v~l~~~-n--~g~~~----~l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~ 245 (356)
.-+++++++.+.. .++.+|++.|- . .|... -+++|.++|++||+++|.|++++ +|-.... ....++ .
T Consensus 205 ~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv-~ 283 (453)
T PRK06943 205 ARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGV-W 283 (453)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCC-C
Confidence 1135677777753 25677777762 2 44333 28899999999999999999984 3322110 011111 3
Q ss_pred ccEEEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhcccc-----CCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 246 ADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV-----FPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 246 ~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
.|+++++ |.++|. +-|+++.++ ++.+.+.... .....-+-|..+.++..++|+.+.+
T Consensus 284 PDivt~g--Kgl~gG~~Pi~av~~~~--------------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~ 347 (453)
T PRK06943 284 PDFLCLS--KGISGGYLPLSLVLSRD--------------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAE 347 (453)
T ss_pred CCeEeee--hhhccCcccceEEEEcH--------------HHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 7999997 998765 347777777 4444433210 1111112356677777888999987
Q ss_pred ccccchhhcccccchHHHHhhhccccccccccCC
Q 018401 319 LITFSHIHVFSLHVYPAFVSNQNNSENIEEDKGR 352 (356)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (356)
+.-.++.++..-.+...+-..+. ...|++.+|+
T Consensus 348 ~~l~~~~~~~G~~l~~~L~~l~~-~~~v~~vrG~ 380 (453)
T PRK06943 348 DDVLARNARKSARLRAALAPLAA-HPQVRHLRQR 380 (453)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhc-CCCEEeEecc
Confidence 64445555443333333322222 2356777665
No 331
>PLN00144 acetylornithine transaminase
Probab=99.24 E-value=8.6e-10 Score=105.44 Aligned_cols=230 Identities=10% Similarity=0.033 Sum_probs=128.7
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc---C---
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL---K--- 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~---~--- 131 (356)
-+|+|.+++.+.+.... +....+ . + +...++.+.+.+..+ .+.+.|++||++++..++.... .
T Consensus 32 ~~p~v~~ai~~q~~~~~---~~~~~~-~-~----~~~~~la~~l~~~~~--~~~v~f~~sGseA~e~AlklAr~~~~~~~ 100 (382)
T PLN00144 32 GDPDWVKAVAEQAGTLA---HVSNVY-H-T----IPQVELAKRLVASSF--ADRVFFCNSGTEANEAAIKFARKYQRVRA 100 (382)
T ss_pred CCHHHHHHHHHHHHhcC---Cccccc-c-C----HHHHHHHHHHHhcCC--CCeEEEeCCcHHHHHHHHHHHHHHHhccC
Confidence 47999999999887521 111111 1 1 122334466666654 3466679999999998877542 1
Q ss_pred ---C------CCeeeecCCCCCccc-Cccccc----cccc--ccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 018401 132 ---P------HDRIMALDLPHGGHL-SHGYQT----DTKK--ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 195 (356)
Q Consensus 132 ---~------gd~Vl~~~~~~~~~~-~~~~~~----~~~~--~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~ 195 (356)
+ ..+|+.....|.+.- ...... ++.. ....+ +..+ +. .|++.+++.+...++++
T Consensus 101 ~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~--~~~~--~~------~d~~~l~~~~~~~~~aa 170 (382)
T PLN00144 101 PDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPG--VTFV--EY------GNLEAARKLIQKGKTAA 170 (382)
T ss_pred CCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCC--eEEe--CC------CCHHHHHHhcCCCCeEE
Confidence 1 246777665443332 100000 0000 00000 1111 11 27899998886546788
Q ss_pred EEEcCCC-C-CCc--cc--HHHHHHHHHHcCCEEEEeccch-hhhccc----CCCCCCCCCccEEEeCCCCcCCC-CCce
Q 018401 196 IVAGASA-Y-ARL--YD--YERIRKVCNKQKAIMLADMAHI-SGLVAA----GVIPSPFEYADVVTTTTHKSLRG-PRGA 263 (356)
Q Consensus 196 v~l~~~n-~-g~~--~~--l~~I~~la~~~g~~vivD~a~~-~g~~~~----~~~~~~l~~~D~~~~s~~K~l~g-p~gG 263 (356)
|++.|.. . |.. .. +++|.++|++||+++|.|++|+ +|.... ..... ..|++++| |.+++ -+.|
T Consensus 171 vi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~---~PDi~t~s--K~l~~G~pig 245 (382)
T PLN00144 171 VFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV---EPDIMTLA--KPLAGGLPIG 245 (382)
T ss_pred EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCC---CCCEEEec--ccccCCcceE
Confidence 8887543 2 322 23 8899999999999999999985 221110 01111 26877776 99854 3348
Q ss_pred EEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcc
Q 018401 264 MIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVF 328 (356)
Q Consensus 264 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~ 328 (356)
+++.++ ++.+.+........++ .+....++..++++++.+..-.++++..
T Consensus 246 ~v~~~~--------------~~~~~~~~~~~~~T~~-~~pl~~aaa~a~l~~i~~~~~~~~~~~~ 295 (382)
T PLN00144 246 AVLVTE--------------KVASAINPGDHGSTFA-GGPLVCNAALAVLDKISKPGFLASVAKK 295 (382)
T ss_pred EEEEcH--------------HHHhccCCCCCCCCCC-CCHHHHHHHHHHHHHHhhchHHHHHHHH
Confidence 888876 4555554322222333 4455566777888999765433444443
No 332
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.23 E-value=8.4e-10 Score=107.76 Aligned_cols=267 Identities=12% Similarity=0.075 Sum_probs=141.0
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh--cCCCCe
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL--LKPHDR 135 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al--~~~gd~ 135 (356)
-+|.|.+++.+.+.. .. +.... +. + +...++.++++++++...+.+.|++||++++..++... .....+
T Consensus 88 ~~p~v~~Ai~~ql~~-~~--~~~~~-~~-~----~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ 158 (459)
T PRK06082 88 GHPHVIEKVKEQMAK-LP--FSPRR-FT-N----ETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFK 158 (459)
T ss_pred CCHHHHHHHHHHHHh-CC--CccCc-cC-C----HHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCE
Confidence 479999999998875 21 11111 11 1 23344567888887643356677999999999877654 233467
Q ss_pred eeecCCCCCc-ccCcccc----cccc--cccccceeeEEEecccCCC--CCCC------CHHHHHHHhhh-cCCcEEEEc
Q 018401 136 IMALDLPHGG-HLSHGYQ----TDTK--KISAVSIFFETMPYRLNES--TGYI------DYDQLEKSATL-FRPKLIVAG 199 (356)
Q Consensus 136 Vl~~~~~~~~-~~~~~~~----~~~~--~~~~~g~~~~~v~~~~~~~--~~~~------d~~~l~~~i~~-~~~k~v~l~ 199 (356)
|+.....|.+ ....... .++. .....+ +..+|.+.... .... +++.+++.+.. .++.+|++.
T Consensus 159 ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvE 236 (459)
T PRK06082 159 VVSLWDSFHGASLDAISVGGEACFRQGMGPLMAG--VERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAE 236 (459)
T ss_pred EEEEeCCCcCccHHHHhhcCCcccccCCCCCCCC--CEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEEC
Confidence 7776544333 2211100 0000 000111 12232111000 0001 13557777753 245667776
Q ss_pred CCC-CC-Cccc---HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCCCCcCCCC--CceEEEEec
Q 018401 200 ASA-YA-RLYD---YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 200 ~~n-~g-~~~~---l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
|.. .| ...| +++|.++|++||+++|+|++|+ +|-.... ....++ ..|+++++ |.++|. +-|+++.++
T Consensus 237 Pv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~~g--Kgl~gG~~P~~av~~~~ 313 (459)
T PRK06082 237 AVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILCIG--KGLGGGLVPIAAMITKD 313 (459)
T ss_pred CccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEEec--ccccCCCCcceEEEEcH
Confidence 432 34 2334 8999999999999999999986 2211100 011111 37999865 999764 336677666
Q ss_pred CcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhhccccccccc
Q 018401 270 GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEED 349 (356)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (356)
++...........+++ .|..+.++..++|+.+.++...++.++....+...+-..+.....|++.
T Consensus 314 --------------~i~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v 378 (459)
T PRK06082 314 --------------KYNTAAQISLGHYTHE-KSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDV 378 (459)
T ss_pred --------------HHHhhccCCCCCCCCC-cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeee
Confidence 3333221111112233 3555667777889998765444555544433333333333334567777
Q ss_pred cCCc
Q 018401 350 KGRP 353 (356)
Q Consensus 350 ~~~~ 353 (356)
+|+-
T Consensus 379 rG~G 382 (459)
T PRK06082 379 RGIG 382 (459)
T ss_pred eecc
Confidence 7764
No 333
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.22 E-value=1.1e-09 Score=106.50 Aligned_cols=251 Identities=15% Similarity=0.051 Sum_probs=132.4
Q ss_pred cCCeeecCC-----CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~-----~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+- ..-+|+|.+++.+.+.... .... . .+ .+ +...++.+++.+++....+.+.|++||+++
T Consensus 50 ~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~-~~~~-~-~~-~~----~~~~~la~~L~~~~p~~~~~v~f~~sGseA 121 (445)
T PRK09221 50 KILDGTAGLWCCNAGHGRPEIVEAVARQAATLD-YAPA-F-QM-GH----PLAFELAERLAELAPGGLDHVFFTNSGSES 121 (445)
T ss_pred EEEEccccHhhccCCCCCHHHHHHHHHHHHhcc-Cccc-c-cc-CC----HHHHHHHHHHHHhCCCCCCEEEEeCCcHHH
Confidence 456665332 1248999999998887521 1111 0 01 11 222345577777765434566779999999
Q ss_pred HHHHHHhhc------C-C-CCeeeecCCCCCccc-Cccc----ccccccc--cccceeeEEEecccCCCC--C-------
Q 018401 122 NFQVYTALL------K-P-HDRIMALDLPHGGHL-SHGY----QTDTKKI--SAVSIFFETMPYRLNEST--G------- 177 (356)
Q Consensus 122 ~~~~l~al~------~-~-gd~Vl~~~~~~~~~~-~~~~----~~~~~~~--~~~g~~~~~v~~~~~~~~--~------- 177 (356)
+..++.... . + ..+|+.....|.+.. .... ...+... ...+ +..+|++.+... +
T Consensus 122 ve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 199 (445)
T PRK09221 122 VDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPG--VDHLPHTLDLPENAFSKGQPEH 199 (445)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCC--CeEeCCCccccccccCCChHHH
Confidence 998876542 1 1 356777665544321 1000 0000000 0011 222332210000 0
Q ss_pred -CCCHHHHHHHhhh---cCCcEEEEcC--CCCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCC
Q 018401 178 -YIDYDQLEKSATL---FRPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFE 244 (356)
Q Consensus 178 -~~d~~~l~~~i~~---~~~k~v~l~~--~n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~ 244 (356)
....+++++.+.. .++.+|++.| ++.|...+ +++|.++|++||+++|+|++|+ +|-... .....+.
T Consensus 200 ~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv- 278 (445)
T PRK09221 200 GAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV- 278 (445)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCC-
Confidence 0113567777753 2456777763 33577666 9999999999999999999984 332111 0111111
Q ss_pred CccEEEeCCCCcCCC--CCceEEEEecCcchhccCCcchhhhHHHhhccc-------cCCCCCCCCcHHHHHHHHHHHHH
Q 018401 245 YADVVTTTTHKSLRG--PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQA-------VFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 245 ~~D~~~~s~~K~l~g--p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
..|+++++ |.++| .+.|+++.++ ++.+.+... ....++++ +...+++..++|+.
T Consensus 279 ~PDi~~~g--K~l~gG~~Pi~av~~~~--------------~i~~~~~~~~~~~~~~~~~~T~~~-~pl~~aaa~a~L~~ 341 (445)
T PRK09221 279 TPDIITFA--KGLTNGAIPMGAVIASD--------------EIYDAFMQGPEYAIEFFHGYTYSA-HPVACAAGLATLDI 341 (445)
T ss_pred CCCEEEec--cccccCcccceeeEEcH--------------HHHHhhccCcccccccccccCCCc-CHHHHHHHHHHHHH
Confidence 25888887 98864 2346677766 344433211 01223443 44556666688999
Q ss_pred Hhcccccchh
Q 018401 316 VCTLITFSHI 325 (356)
Q Consensus 316 ~~~~~~~~~~ 325 (356)
+.++.-+++.
T Consensus 342 i~~~~l~~~~ 351 (445)
T PRK09221 342 YREEDLFERA 351 (445)
T ss_pred HHhccHHHHH
Confidence 9765333333
No 334
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.22 E-value=1.1e-09 Score=106.09 Aligned_cols=267 Identities=12% Similarity=0.077 Sum_probs=140.0
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC-CCCccccCCCchHHHHHHHHhh--cCCCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGGSLSGSPSNFQVYTAL--LKPHD 134 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~v~v~~sgs~a~~~~l~al--~~~gd 134 (356)
-+|+|.+++.+.+.... +.....+ .+ +...++.+.+.+++.. ..+.+.|++||++++..+++.. .....
T Consensus 57 ~~p~v~~ai~~ql~~~~---~~~~~~~-~~----~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~ 128 (421)
T PRK06777 57 RHPKVVAAVRQQLDQFT---HTAYQIV-PY----ASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRP 128 (421)
T ss_pred CCHHHHHHHHHHHhhcc---ccccccc-CC----hHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCC
Confidence 48999999999887521 1111000 11 1223345777777653 2346677899999999887754 23345
Q ss_pred eeeecCCCCCcccCcccc------ccccc--ccccceeeEEEecccCCC--CCCCCHHHHHHHhhh----cCCcEEEEcC
Q 018401 135 RIMALDLPHGGHLSHGYQ------TDTKK--ISAVSIFFETMPYRLNES--TGYIDYDQLEKSATL----FRPKLIVAGA 200 (356)
Q Consensus 135 ~Vl~~~~~~~~~~~~~~~------~~~~~--~~~~g~~~~~v~~~~~~~--~~~~d~~~l~~~i~~----~~~k~v~l~~ 200 (356)
+|+.....|++...-... .++.. ....+ +..++++.... ....+++.+++.+.+ .++.+|++.|
T Consensus 129 ~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Ep 206 (421)
T PRK06777 129 GVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGS--IFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEP 206 (421)
T ss_pred eEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCC--cEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECC
Confidence 677766544433211000 00000 00001 11122221100 001236677777752 2466777763
Q ss_pred CC--CC-Cccc---HHHHHHHHHHcCCEEEEeccchhhhcccCC-CC-CCCC-CccEEEeCCCCcCCCC-CceEEEEecC
Q 018401 201 SA--YA-RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV-IP-SPFE-YADVVTTTTHKSLRGP-RGAMIFFRKG 270 (356)
Q Consensus 201 ~n--~g-~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~-~~-~~l~-~~D~~~~s~~K~l~gp-~gG~l~~~~~ 270 (356)
.. .| .+.+ +++|.++|++||+++|+|++|+ |....+. .. ..++ ..|++++ .|.+++. +.|+++.++
T Consensus 207 v~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv~~--sK~l~~G~pigav~~~~- 282 (421)
T PRK06777 207 IQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLITM--AKSLGGGMPISAVVGRA- 282 (421)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEEee--ehhhcCCCceEEEEEcH-
Confidence 32 45 2344 8899999999999999999986 3311111 00 0011 3687765 4988632 338888876
Q ss_pred cchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhhcccccccccc
Q 018401 271 VKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDK 350 (356)
Q Consensus 271 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (356)
++.+.+........++ .+....++..++|+.+.++.-.++.++....+...+-..+.....+.+.+
T Consensus 283 -------------~i~~~~~~~~~~~T~~-~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr 348 (421)
T PRK06777 283 -------------EVMDAPAPGGLGGTYA-GNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIR 348 (421)
T ss_pred -------------HHHhccCCCCCCCCCC-cCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEec
Confidence 4555444322222333 46666777778898887643334444443333333322223333455555
Q ss_pred CC
Q 018401 351 GR 352 (356)
Q Consensus 351 ~~ 352 (356)
|+
T Consensus 349 g~ 350 (421)
T PRK06777 349 AR 350 (421)
T ss_pred Cc
Confidence 54
No 335
>PRK06149 hypothetical protein; Provisional
Probab=99.22 E-value=2e-09 Score=114.12 Aligned_cols=277 Identities=10% Similarity=0.011 Sum_probs=144.5
Q ss_pred cCCeeecCCC---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHH
Q 018401 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~ 123 (356)
..|++..+-. .-+|+|.+++.+.+.... ...++. + +...++.+++++++....+.+.|++||++|+.
T Consensus 586 ~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~----~~~~~~--~----~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e 655 (972)
T PRK06149 586 SYLDMVNNVTVLGHGHPRLAAAAARQWSLLN----TNSRFH--Y----AAVAEFSERLAALAPDGLDTVFLVNSGSEAND 655 (972)
T ss_pred EEEECCCCccccCCCCHHHHHHHHHHHHhcc----cccccc--C----HHHHHHHHHHHHhCCCCcCEEEEeCCchHHHH
Confidence 3455543322 237999999988876521 111111 1 22334557788777433345666999999999
Q ss_pred HHHHhh--cCCCCeeeecCCCCCc-ccCcccc-cc---cccc--cccceeeEEEecccCCC-CC-CCC-----HHHHHHH
Q 018401 124 QVYTAL--LKPHDRIMALDLPHGG-HLSHGYQ-TD---TKKI--SAVSIFFETMPYRLNES-TG-YID-----YDQLEKS 187 (356)
Q Consensus 124 ~~l~al--~~~gd~Vl~~~~~~~~-~~~~~~~-~~---~~~~--~~~g~~~~~v~~~~~~~-~~-~~d-----~~~l~~~ 187 (356)
.+++.. .....+|+.....|.+ ....... .. .... ...+ .+..++.+.... .+ ..+ .+++++.
T Consensus 656 ~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~-~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 734 (972)
T PRK06149 656 LAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPD-WVHPVESPNTYRGRFRGADSAADYVRDVVAQ 734 (972)
T ss_pred HHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCC-CeEEeCCCcccCCcCCCcccHHHHHHHHHHH
Confidence 888733 2234556666544332 2111000 00 0000 0000 011222111000 01 011 2344433
Q ss_pred hh-----hcCCcEEEEc--CCCCCCccc----HHHHHHHHHHcCCEEEEeccc-hhhhccc---CCCCCCCCCccEEEeC
Q 018401 188 AT-----LFRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAH-ISGLVAA---GVIPSPFEYADVVTTT 252 (356)
Q Consensus 188 i~-----~~~~k~v~l~--~~n~g~~~~----l~~I~~la~~~g~~vivD~a~-~~g~~~~---~~~~~~l~~~D~~~~s 252 (356)
+. ..++.+|++. ..+.|.+.+ +++|.++|++||+++|+|++| ++|.... .....+. ..|+++++
T Consensus 735 l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDivt~g 813 (972)
T PRK06149 735 LEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDIITMA 813 (972)
T ss_pred HHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEEEec
Confidence 32 1245667765 344566666 999999999999999999999 4544321 1111111 37999886
Q ss_pred CCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhcc-ccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccc
Q 018401 253 THKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQ-AVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSL 330 (356)
Q Consensus 253 ~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~ 330 (356)
|.++|... |++++++ ++.+.+.. ..+...+ +-|..+.++..++|+.+.++.-.++.++..-
T Consensus 814 --K~lg~G~Pl~av~~~~--------------~i~~~~~~~~~~~sT~-~gnP~~~aaala~L~~i~~e~l~~~~~~~G~ 876 (972)
T PRK06149 814 --KGMGNGHPLGAVITRR--------------EIAEALEAEGYFFSST-GGSPVSCRIGMAVLDVLREEKLQENARRVGD 876 (972)
T ss_pred --ccccCCeeeEEEEEcH--------------HHHhhhccCCcccCCC-CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99975433 8888877 45554432 1111122 3355666677788999987644455544333
Q ss_pred cchHHHHhhhccccccccccCC
Q 018401 331 HVYPAFVSNQNNSENIEEDKGR 352 (356)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~ 352 (356)
.+...+-..+...-.|++.+|+
T Consensus 877 ~l~~~L~~l~~~~~~i~~vrG~ 898 (972)
T PRK06149 877 HLKARLEALADRHPLIGAVHGM 898 (972)
T ss_pred HHHHHHHHHHHhCCCeEEEeec
Confidence 3333333333344567776655
No 336
>PRK07678 aminotransferase; Validated
Probab=99.21 E-value=1.5e-09 Score=105.84 Aligned_cols=277 Identities=12% Similarity=0.060 Sum_probs=143.2
Q ss_pred cCCeeecCC-----CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~-----~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+- ..-+|+|.+++.+.+.... +... .+ .+ +...++.+.+.+.++.. +.+.|++||++|
T Consensus 48 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~~-~~-~~----~~~~~lae~l~~~~~~~-~~v~f~~sGseA 117 (451)
T PRK07678 48 RYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLS---YFPL-TQ-SH----EPAIKLAEKLNEWLGGE-YVIFFSNSGSEA 117 (451)
T ss_pred EEEEccccHHhhcCCCCCHHHHHHHHHHHHhcC---cccc-cc-CC----HHHHHHHHHHHHhCCCC-CEEEEeCCcHHH
Confidence 456654332 1247999999998887521 1111 11 11 22234557777777653 356669999999
Q ss_pred HHHHHHhhcC-------CC-CeeeecCCCCCcccCccccc-----ccc--cccccceeeEEEecccCCCC-C-----CCC
Q 018401 122 NFQVYTALLK-------PH-DRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNEST-G-----YID 180 (356)
Q Consensus 122 ~~~~l~al~~-------~g-d~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~~-~-----~~d 180 (356)
+..++..... +| .+|+.....|.+........ .+. .....| +..++.+..... + ..|
T Consensus 118 ~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 195 (451)
T PRK07678 118 NETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPG--FLHVPPPDCYRMPGIESEDIYD 195 (451)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCC--CEEeCCCccccccccCChHHHH
Confidence 9988775421 23 56777665444332111000 000 000111 222322111000 0 011
Q ss_pred ---HHHHHHHhh---hcCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcc--cCCCCCCCCC
Q 018401 181 ---YDQLEKSAT---LFRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVA--AGVIPSPFEY 245 (356)
Q Consensus 181 ---~~~l~~~i~---~~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~--~~~~~~~l~~ 245 (356)
++.+++.+. ..++.+|++.|-. .|.+.+ +++|.++|++||+++|+|++|+ +|-.. ......++ .
T Consensus 196 ~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~ 274 (451)
T PRK07678 196 LECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-K 274 (451)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-C
Confidence 233566664 1256778887432 454443 8899999999999999999984 44321 11111111 3
Q ss_pred ccEEEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhcccc-----CCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 246 ADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV-----FPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 246 ~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
.|+++++ |.|+|. +-|++++++ ++.+.+.... .....-+-|....++..++|+.+.+
T Consensus 275 PDivt~g--K~lggG~~Pi~av~~~~--------------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~ 338 (451)
T PRK07678 275 PDIITMA--KGITSAYLPLSATAVKK--------------EIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMEN 338 (451)
T ss_pred CCEEEee--cccccCCcceeEEEEcH--------------HHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHh
Confidence 7999987 999764 337777777 4444443211 1111123345666677788999977
Q ss_pred ccccchhhcccccchHHHHhhhccccccccccCC
Q 018401 319 LITFSHIHVFSLHVYPAFVSNQNNSENIEEDKGR 352 (356)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (356)
+.-.++.++..-.+...+-........+++.+|+
T Consensus 339 ~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~ 372 (451)
T PRK07678 339 ENLIERSAQLGELLLEQLKEELGEHPLVGDIRGK 372 (451)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEee
Confidence 5333444433322222221122223456666655
No 337
>PRK07481 hypothetical protein; Provisional
Probab=99.20 E-value=1.7e-09 Score=105.46 Aligned_cols=269 Identities=12% Similarity=0.055 Sum_probs=141.7
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC-CCCccccCCCchHHHHHHHHhhcC-----
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGGSLSGSPSNFQVYTALLK----- 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~v~v~~sgs~a~~~~l~al~~----- 131 (356)
-+|+|.+++.+.+.... +... + .+. ..+.+.++.+++.++++- ..+.+.|++||++|+..+++....
T Consensus 59 ~~p~v~~Ai~~ql~~~~---~~~~-~-~~~--~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~ 131 (449)
T PRK07481 59 NREEVKEAIVRQLDELE---YYST-F-DGT--THPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVR 131 (449)
T ss_pred CCHHHHHHHHHHHHhcc---ceec-c-ccc--CCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhc
Confidence 47999999998887521 1000 0 000 112233455777777642 234566799999999988875421
Q ss_pred --C-CCeeeecCCCCCcccCccccc-----ccc--cccccceeeEEEecccCCC-CC-CCCHHH--------HHHHhh--
Q 018401 132 --P-HDRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNES-TG-YIDYDQ--------LEKSAT-- 189 (356)
Q Consensus 132 --~-gd~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~-~~-~~d~~~--------l~~~i~-- 189 (356)
+ ..+|+.....|.+.-...... ++. .....| +..++.+.... .+ ..|.+. +++.+.
T Consensus 132 g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~ 209 (449)
T PRK07481 132 GQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPG--CFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQ 209 (449)
T ss_pred CCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCC--CEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhc
Confidence 2 356777765544321100000 000 000112 21222221000 00 013333 344443
Q ss_pred -hcCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCCCccEEEeCCCCcCCC
Q 018401 190 -LFRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLRG 259 (356)
Q Consensus 190 -~~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~~~D~~~~s~~K~l~g 259 (356)
..++.+|++.|.. .|...+ +++|.++|++||+++|.|++++ +|-... .....++ ..|+++++ |.++|
T Consensus 210 ~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~g 286 (449)
T PRK07481 210 GPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCLA--KGITS 286 (449)
T ss_pred CCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEEe--ecccC
Confidence 1256777877433 454433 8899999999999999999985 332110 0111111 27999997 99976
Q ss_pred C--CceEEEEecCcchhccCCcchhhhHHHhhcccc------C-CCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccc
Q 018401 260 P--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV------F-PGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSL 330 (356)
Q Consensus 260 p--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~-~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~ 330 (356)
. +-|++++++ ++.+.+.... . ..++ +-|....++..++|+.+.++.-.++.++..-
T Consensus 287 G~~Pi~av~~~~--------------~i~~~~~~~~~~~~~~~h~~T~-~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~ 351 (449)
T PRK07481 287 GYVPLGATMVNA--------------RIADAFEANADFGGAIMHGYTY-SGHPVACAAALATLDIVVREDLPANAAKRGA 351 (449)
T ss_pred CCcCceEEEEcH--------------HHHHHHhccCccccccccCCCC-CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4 346677776 4444443211 1 1122 2355667777788999977644555555544
Q ss_pred cchHHHHhhhccccccccccCCc
Q 018401 331 HVYPAFVSNQNNSENIEEDKGRP 353 (356)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~ 353 (356)
.+...+-..+.....|++.+|+-
T Consensus 352 ~l~~~L~~l~~~~~~i~~vrG~G 374 (449)
T PRK07481 352 YLLEGLQPLKERFELVGDVRGKG 374 (449)
T ss_pred HHHHHHHHHhhcCCCeEEEeecc
Confidence 44444433344445677776654
No 338
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.20 E-value=8.6e-10 Score=106.59 Aligned_cols=265 Identities=14% Similarity=0.060 Sum_probs=137.2
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK------ 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~------ 131 (356)
-+|+|.+++.+.+.... ...... ..+ +...++.+.+.+......+.+.|++||++|+..++.....
T Consensus 57 ~~p~i~~ai~~q~~~~~-~~~~~~---~~~----~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g 128 (422)
T PRK05630 57 GHPRLKAAAHKQIDTMS-HVMFGG---LTH----EPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQG 128 (422)
T ss_pred CCHHHHHHHHHHHHhCC-CcccCC---cCC----HHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcC
Confidence 47999999999887521 011100 011 2223455777777643345667799999999988775421
Q ss_pred -C-CCeeeecCCCCCcc-cCcccccc-----cc--cccccceeeEEEecccCCCCCCCC----HHHHHHHhhhcCCcEEE
Q 018401 132 -P-HDRIMALDLPHGGH-LSHGYQTD-----TK--KISAVSIFFETMPYRLNESTGYID----YDQLEKSATLFRPKLIV 197 (356)
Q Consensus 132 -~-gd~Vl~~~~~~~~~-~~~~~~~~-----~~--~~~~~g~~~~~v~~~~~~~~~~~d----~~~l~~~i~~~~~k~v~ 197 (356)
+ ..+|+.....|++. ........ +. .....+ ...+|.+.......-+ .+.+++.+.+ ++.+|+
T Consensus 129 ~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~iAAvi 205 (422)
T PRK05630 129 HPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPE--QIFAPAPPVRGSSPQEISEYLRSLELLIDE-TVAAII 205 (422)
T ss_pred CCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCC--CeEcCCCcccCCChHHHHHHHHHHHHHHhh-ceEEEE
Confidence 2 35677776554432 11110000 00 000001 1123222110000001 2445555554 788888
Q ss_pred EcCC-C--CCC----cccHHHHHHHHHHcCCEEEEeccchhhhcccC-C---CCCCCCCccEEEeCCCCcCCC--CCceE
Q 018401 198 AGAS-A--YAR----LYDYERIRKVCNKQKAIMLADMAHISGLVAAG-V---IPSPFEYADVVTTTTHKSLRG--PRGAM 264 (356)
Q Consensus 198 l~~~-n--~g~----~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~-~---~~~~l~~~D~~~~s~~K~l~g--p~gG~ 264 (356)
+.|- . .|. ...+++|.++|++||+++|+|++|. |.-..+ . ...+. ..|+++++ |.++| ++.|+
T Consensus 206 ~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv-~PDi~t~g--K~l~gG~~p~~a 281 (422)
T PRK05630 206 IEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIAT-GFGRTGELFATLAAGV-TPDIMCVG--KALTGGFMSFAA 281 (422)
T ss_pred EechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccee-CCCcCchhhHHHhcCC-CCCeeeee--chhhcCccccce
Confidence 8763 2 343 3348899999999999999999984 321111 1 01110 26899776 99955 56688
Q ss_pred EEEecCcchhccCCcchhhhHHHhhccc-----cCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhh
Q 018401 265 IFFRKGVKEINKQGKEVFYDYEEKINQA-----VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSN 339 (356)
Q Consensus 265 l~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (356)
+++++ ++.+.+... ......-+.|....++..++|+.+.++...++.++..-.. .+.+..
T Consensus 282 v~~~~--------------~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l-~~~L~~ 346 (422)
T PRK05630 282 TLCTD--------------KVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAEL-IAGLSP 346 (422)
T ss_pred eeccH--------------HHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH-HHHHHH
Confidence 88877 444443211 0111122345667777778899997653333333322111 111222
Q ss_pred hccccccccccCC
Q 018401 340 QNNSENIEEDKGR 352 (356)
Q Consensus 340 ~~~~~~~~~~~~~ 352 (356)
......|++.+|+
T Consensus 347 l~~~~~v~~vRg~ 359 (422)
T PRK05630 347 LAHLPGVADVRVL 359 (422)
T ss_pred hhcCCCeeeeecc
Confidence 2223456776665
No 339
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.19 E-value=4e-10 Score=102.83 Aligned_cols=196 Identities=18% Similarity=0.205 Sum_probs=132.1
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHHHHHHHHhh-cCCCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPSNFQVYTAL-LKPHD 134 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a~~~~l~al-~~~gd 134 (356)
.|..+++.....+.... |..+. |+.+++..-+++.+++.+.++=|. +|++|.+|+|+|.++..++..+ ..+.+
T Consensus 87 fp~Dai~RA~~~L~~~g--Gs~Ga--YS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~ 162 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCG--GSLGA--YSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKT 162 (475)
T ss_pred CCHHHHHHHHHHHHhcC--Ccccc--cccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCC
Confidence 57778887777776532 33333 555677888888888888888775 5666666999998888677766 46889
Q ss_pred eeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhc----CCcE-EEEcCCC-CCCcc
Q 018401 135 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLF----RPKL-IVAGASA-YARLY 207 (356)
Q Consensus 135 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~----~~k~-v~l~~~n-~g~~~ 207 (356)
.|+++- |-|++|.-.+.+.|... |+|-+++ .+|.+|.++|++.+.+. ++++ ++++|-| ||.+.
T Consensus 163 GvliPi--------PQYPLYsAti~l~~~~~--v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvl 232 (475)
T KOG0258|consen 163 GVLIPI--------PQYPLYSATISLLGGTQ--VPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVL 232 (475)
T ss_pred ceEeec--------CCCchhHHHHHHhCCcc--cceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhh
Confidence 999998 45555554555666555 5555553 35799999999988653 3554 4556888 88444
Q ss_pred ---cHHHHHHHHHHcCCEEEEeccchhhhcccCCC---------CCCCCCcc----EEEeCCCCcC---CCCCceEEEE
Q 018401 208 ---DYERIRKVCNKQKAIMLADMAHISGLVAAGVI---------PSPFEYAD----VVTTTTHKSL---RGPRGAMIFF 267 (356)
Q Consensus 208 ---~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~---------~~~l~~~D----~~~~s~~K~l---~gp~gG~l~~ 267 (356)
.+++|..+|++.|++++.|++.--.....+-. ..+-.+.| +.+.|.||.. +|.+||++=+
T Consensus 233 s~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv 311 (475)
T KOG0258|consen 233 SEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMES 311 (475)
T ss_pred cHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeec
Confidence 58899999999999999999864433322100 00000121 4455677866 5788887754
No 340
>PRK07483 hypothetical protein; Provisional
Probab=99.19 E-value=1.4e-09 Score=105.73 Aligned_cols=270 Identities=12% Similarity=0.082 Sum_probs=142.3
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK------ 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~------ 131 (356)
-+|.|.+++.+.+.... +.....+ .+ +...++.+++.+++....+.+.|++||++++..+++....
T Consensus 47 ~~p~v~~av~~ql~~~~---~~~~~~~-~~----~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g 118 (443)
T PRK07483 47 SHPRVIAAIHAQIDRLA---YAHTSFF-TT----EPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIG 118 (443)
T ss_pred CCHHHHHHHHHHHHhcc---Ccccccc-CC----HHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcC
Confidence 48999999999887521 1111011 11 2233455777777643335667799999999988775421
Q ss_pred -CC-CeeeecCCCCCcccCccccc-----ccc--cccccceeeEEEecccCCCCC--CC--------CHHHHHHHhhh--
Q 018401 132 -PH-DRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNESTG--YI--------DYDQLEKSATL-- 190 (356)
Q Consensus 132 -~g-d~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~~~--~~--------d~~~l~~~i~~-- 190 (356)
+| .+|+.....|++...-.... .+. .....+ +..++.+...... .. .++++++.+..
T Consensus 119 ~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 196 (443)
T PRK07483 119 QPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIE--AHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELG 196 (443)
T ss_pred CCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCC--CEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcC
Confidence 23 46777664444332100000 000 000111 1222221110000 00 12566665542
Q ss_pred -cCCcEEEEcCCC---CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCCCccEEEeCCCCcCCC
Q 018401 191 -FRPKLIVAGASA---YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLRG 259 (356)
Q Consensus 191 -~~~k~v~l~~~n---~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~~~D~~~~s~~K~l~g 259 (356)
.++.+|++.|-. .|...+ +++|.++|++||+++|+|++|+ +|-... .....++ ..|+++++ |.++|
T Consensus 197 ~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--K~l~g 273 (443)
T PRK07483 197 PDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV-APDLVTIA--KGLGA 273 (443)
T ss_pred CCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC-CCCeeeeh--hhhcc
Confidence 246677776432 243333 8899999999999999999985 332110 0011111 27999997 99976
Q ss_pred C--CceEEEEecCcchhccCCcchhhhHHHhhcccc---CCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchH
Q 018401 260 P--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV---FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYP 334 (356)
Q Consensus 260 p--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~ 334 (356)
. +-|++++++ ++.+.+.... ..+..-+-|..+.++..+.++.+.++.-.++.++..-.+..
T Consensus 274 G~~Pi~av~~~~--------------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~ 339 (443)
T PRK07483 274 GYQPIGAVLASD--------------RIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRA 339 (443)
T ss_pred CccccEEEEEcH--------------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 5 347777777 4444443211 11111223556677777889999876545555544333333
Q ss_pred HHHhhhccccccccccCCcc
Q 018401 335 AFVSNQNNSENIEEDKGRPC 354 (356)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~ 354 (356)
.+-..+.....|++.+|+-|
T Consensus 340 ~L~~l~~~~~~i~~vRG~Gl 359 (443)
T PRK07483 340 RLRERLGQHPHVGDIRGRGL 359 (443)
T ss_pred HHHHHHhcCCCeeeEeeccc
Confidence 33222333456777777644
No 341
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.19 E-value=1e-10 Score=103.60 Aligned_cols=269 Identities=12% Similarity=0.120 Sum_probs=167.3
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCC--
Q 018401 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHD-- 134 (356)
Q Consensus 57 ~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd-- 134 (356)
.+|..+...+...++. |+.--...++.+-..|. ...+.+...++...|+..+++.+.++-|.-+..++..+.+|-.
T Consensus 78 LmPK~t~~~~~~eLDk-Wak~av~gH~~GkvPW~-~~De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR 155 (465)
T KOG3846|consen 78 LMPKSTRNSINAELDK-WAKCAVEGHFKGKVPWV-SIDEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKR 155 (465)
T ss_pred cCchhhHhHHHHHHHH-HHhhhhhccccccccee-ecchhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchh
Confidence 3578888888777765 21000001111212222 1123455889999999888888877777555556677777643
Q ss_pred -eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCC--CCCCHHHHHHHhhhcC--CcEEEEcCCC--CCCcc
Q 018401 135 -RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST--GYIDYDQLEKSATLFR--PKLIVAGASA--YARLY 207 (356)
Q Consensus 135 -~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~d~~~l~~~i~~~~--~k~v~l~~~n--~g~~~ 207 (356)
+|+.-.-.++ +-.|..+ ..+++.|..++..-+.+.+.+ ..+-.+++.+.|.++. ..+|.++... ||...
T Consensus 156 ~KILlE~kaFP---SDhYAie-sQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~F 231 (465)
T KOG3846|consen 156 FKILLEKKAFP---SDHYAIE-SQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYF 231 (465)
T ss_pred hhhhhccCCCC---chHHHHH-hhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeeccccc
Confidence 4664432232 2222221 134555655433322333233 3566778877776532 3445555333 79999
Q ss_pred cHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCC-CCCc-eEEEEecCc----chhccCCcch
Q 018401 208 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR-GPRG-AMIFFRKGV----KEINKQGKEV 281 (356)
Q Consensus 208 ~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~-gp~g-G~l~~~~~~----~~~~~~g~~~ 281 (356)
++.+|...-+..|++|=.|-||++|.+++.+..|+ +|+.+.+++|+++ |+.| |.++++... .+.+.|++.-
T Consensus 232 di~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWg---VDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh 308 (465)
T KOG3846|consen 232 DIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWG---VDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGH 308 (465)
T ss_pred chhhhhhcccCCCcEechhhhhhhcCCceEEeecC---CceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhccC
Confidence 99999966666799999999999999999988888 9999999999995 5555 778887754 2345554432
Q ss_pred hhhHHHhhcc----ccCCC----CCCCCcHHHHHHHHHHHHHHhcccccchhhcccc--cchHHHH
Q 018401 282 FYDYEEKINQ----AVFPG----LQGGPHNHTITGLAVALKQVCTLITFSHIHVFSL--HVYPAFV 337 (356)
Q Consensus 282 ~~~~~~~~~~----~~~~~----~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~--~~~~~~~ 337 (356)
+...+++. ...|+ +.++|++...+|+..+|+.+.+ ..++.+|..++ .-|.+++
T Consensus 309 --~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q-~~~~~lRkrS~lLTgYleyL 371 (465)
T KOG3846|consen 309 --DPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQ-FNINELRKRSLLLTGYLEYL 371 (465)
T ss_pred --CcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHH-hhHHHHhhhhhhHHhHHHHH
Confidence 22222211 12233 3489999999999999998876 34666776544 4466665
No 342
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.18 E-value=1.7e-09 Score=104.96 Aligned_cols=243 Identities=14% Similarity=0.099 Sum_probs=132.6
Q ss_pred HcCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchH
Q 018401 46 WKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSP 120 (356)
Q Consensus 46 ~~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~ 120 (356)
+..|++..+-. .-+|.|.+++.+.+.... .+ . .. ...+.++.+.+.+++.. .+.+.|++||++
T Consensus 48 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~--~~------~-~~--~~~~~~la~~l~~~~p~-~~~v~f~~sGse 115 (431)
T PRK06209 48 NEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC--NF------T-RP--SAIELDAAESFLELIDG-ADMVKFCKNGSD 115 (431)
T ss_pred CEEEEccccccchhcCCCCHHHHHHHHHHHHhCc--CC------C-CC--CHHHHHHHHHHHHhCCc-cceEEEecCHHH
Confidence 34567654432 247999999999887622 11 1 01 12222345777777642 245667999999
Q ss_pred HHHHHHHhh--cCCCCeeeec-CCCCCcccCccccccccccccccee----eEEEecccCCCCCCCCHHHHHHHhhhc--
Q 018401 121 SNFQVYTAL--LKPHDRIMAL-DLPHGGHLSHGYQTDTKKISAVSIF----FETMPYRLNESTGYIDYDQLEKSATLF-- 191 (356)
Q Consensus 121 a~~~~l~al--~~~gd~Vl~~-~~~~~~~~~~~~~~~~~~~~~~g~~----~~~v~~~~~~~~~~~d~~~l~~~i~~~-- 191 (356)
++..+++.. .....+|+.. ...+.+.. .++...... ..+.. ...+.++ .-|++++++++...
T Consensus 116 A~e~AlklAr~~tgr~~i~~~~~~~~h~~~-~~~~g~~~~--~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~ 186 (431)
T PRK06209 116 ATSAAVRLARAYTGRDLVARCADHPFFSTD-DWFIGTTPM--SAGIPASVSALTVTFR------YNDIASLEALFEDHPG 186 (431)
T ss_pred HHHHHHHHHHHHhCCCeEEEeccCcccccc-ccccccCCC--CCCCChhHhccccccC------CCCHHHHHHHHHhCCC
Confidence 999888754 2223445544 11111100 111100000 00100 0011111 23789999888642
Q ss_pred CCcEEEEcCCC--CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccC--CCC-CCCCCccEEEeCCCCcCCCC-CceEE
Q 018401 192 RPKLIVAGASA--YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG--VIP-SPFEYADVVTTTTHKSLRGP-RGAMI 265 (356)
Q Consensus 192 ~~k~v~l~~~n--~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~--~~~-~~l~~~D~~~~s~~K~l~gp-~gG~l 265 (356)
++.+|++.+.. .+....+++|.++|++||+++|+|++| .|..... ... .++ ..|+++++ |.|+|. ++|++
T Consensus 187 ~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv-~PDi~t~g--K~lggG~p~~av 262 (431)
T PRK06209 187 RIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGI-VPDLSCFG--KALGNGFAVSAL 262 (431)
T ss_pred CEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCC-Ccceeeeh--hhhcCCcccEEE
Confidence 35566665332 345556999999999999999999999 5543211 111 111 36887776 999753 45777
Q ss_pred EEecCcchhccCCcchhhhHHHh--hccc--cCC---CCCCCCcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 266 FFRKGVKEINKQGKEVFYDYEEK--INQA--VFP---GLQGGPHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~~~~~--~~~~--~~~---~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
+.++ ++.+. +... ... ...-++|...+++..++|+.+.++...++.++
T Consensus 263 ~~~~--------------~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~ 317 (431)
T PRK06209 263 AGKR--------------EYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHE 317 (431)
T ss_pred EEHH--------------HHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 7776 34443 1110 011 11234566778888899999987643444443
No 343
>PRK07480 putative aminotransferase; Validated
Probab=99.17 E-value=1.9e-09 Score=105.12 Aligned_cols=242 Identities=12% Similarity=0.020 Sum_probs=128.1
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK------ 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~------ 131 (356)
-+|+|.+++.+.+.... ... . ++. ...+...++.+++++.+....+.+.|++||++++..++.....
T Consensus 67 ~~p~v~~Ai~~q~~~~~-~~~--~-~~~---~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g 139 (456)
T PRK07480 67 GRKELADAAARQMRELP-YYN--T-FFK---TTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKG 139 (456)
T ss_pred CCHHHHHHHHHHHHhcC-Ccc--c-ccc---cCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcC
Confidence 47999999999887521 011 0 000 0112333456778777754445667799999999988765421
Q ss_pred -C-CCeeeecCCCCCcc-cCcccc----cccc--cccccceeeEEEecccCCC---CC-CCC-----HHHHHHHhhh---
Q 018401 132 -P-HDRIMALDLPHGGH-LSHGYQ----TDTK--KISAVSIFFETMPYRLNES---TG-YID-----YDQLEKSATL--- 190 (356)
Q Consensus 132 -~-gd~Vl~~~~~~~~~-~~~~~~----~~~~--~~~~~g~~~~~v~~~~~~~---~~-~~d-----~~~l~~~i~~--- 190 (356)
+ ..+|+.....|.+. +..... ..+. +....+ +..++.+.... +. ..+ .+.+++.+..
T Consensus 140 ~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 217 (456)
T PRK07480 140 KPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPG--IVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGA 217 (456)
T ss_pred CCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCC--CeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCC
Confidence 2 34577666444332 211000 0000 000111 11122111000 00 001 2566655532
Q ss_pred cCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCCCccEEEeCCCCcCCCC-
Q 018401 191 FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLRGP- 260 (356)
Q Consensus 191 ~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~~~D~~~~s~~K~l~gp- 260 (356)
.++.+|++.|.. .|...+ +++|.++|++||+++|+|++|+ +|-... .....++ ..|+++++ |.++|.
T Consensus 218 ~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~ 294 (456)
T PRK07480 218 DNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLMTIA--KGLTSGY 294 (456)
T ss_pred CcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCeeeee--hhhccCC
Confidence 246677776433 455444 8899999999999999999984 432211 0111111 36999887 999763
Q ss_pred -CceEEEEecCcchhccCCcchhhhHHHhhc--ccc-CCCCCCCCcHHHHHHHHHHHHHHhcccccchh
Q 018401 261 -RGAMIFFRKGVKEINKQGKEVFYDYEEKIN--QAV-FPGLQGGPHNHTITGLAVALKQVCTLITFSHI 325 (356)
Q Consensus 261 -~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~ 325 (356)
+-|+++.++ ++.+.+. ... ..+..-+-|..+.++..++|+.+.++.-.++.
T Consensus 295 ~Pi~av~~~~--------------~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~ 349 (456)
T PRK07480 295 IPMGAVGVGD--------------RVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERV 349 (456)
T ss_pred ccceEEEEcH--------------HHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 236666666 4444441 111 11112234567777778899999875434444
No 344
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.17 E-value=4.2e-09 Score=102.06 Aligned_cols=241 Identities=10% Similarity=-0.041 Sum_probs=127.6
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC-CCCccccCCCchHHHHHHHHhh--cCCCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGGSLSGSPSNFQVYTAL--LKPHD 134 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~v~v~~sgs~a~~~~l~al--~~~gd 134 (356)
-+|+|.+++.+.+.... +..... .. .+...++.+.+.+.+.. ..+.+.|++||++++..++... .....
T Consensus 50 ~~p~v~~a~~~ql~~~~---~~~~~~-~~----~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~ 121 (420)
T TIGR00700 50 SHPRVVDAVRTQVAEFT---HTCFMV-TP----YEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRP 121 (420)
T ss_pred CCHHHHHHHHHHHHhcc---Cccccc-cC----ChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCC
Confidence 47999999999887521 111100 01 11223455677776643 2346677999999999887754 23345
Q ss_pred eeeecCCCCCcccCccccc------ccccc--cccceeeEEEecccCCCC--------CCCCHHHHHHHhh----hcCCc
Q 018401 135 RIMALDLPHGGHLSHGYQT------DTKKI--SAVSIFFETMPYRLNEST--------GYIDYDQLEKSAT----LFRPK 194 (356)
Q Consensus 135 ~Vl~~~~~~~~~~~~~~~~------~~~~~--~~~g~~~~~v~~~~~~~~--------~~~d~~~l~~~i~----~~~~k 194 (356)
+|+.....|++.-...... ++.+. ...+ +..++++..... ..-+++.+++.+. ..++.
T Consensus 122 ~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iA 199 (420)
T TIGR00700 122 GVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPE--VYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVA 199 (420)
T ss_pred cEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCC--cEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEE
Confidence 6776665444332100000 00000 0111 222332211000 0012556666653 12567
Q ss_pred EEEEcCC--CCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcc--cCCCCCCCCCccEEEeCCCCcCCCC-CceE
Q 018401 195 LIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVA--AGVIPSPFEYADVVTTTTHKSLRGP-RGAM 264 (356)
Q Consensus 195 ~v~l~~~--n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~--~~~~~~~l~~~D~~~~s~~K~l~gp-~gG~ 264 (356)
+|++.|- ++|...+ +++|.++|++||+++|+|++++ +|... ......+. ..|++++| |.+++. +-|+
T Consensus 200 avi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~-~pDi~~ls--K~l~~G~pig~ 276 (420)
T TIGR00700 200 ALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGP-EPDLITTA--KSLADGLPLSG 276 (420)
T ss_pred EEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCC-CCCEEEee--ccccCCcceEE
Confidence 7777633 3564444 8899999999999999999975 22111 00011111 37888765 988642 3388
Q ss_pred EEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 265 IFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 265 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
++.++ ++.+.+........++ .+.+..++..++++.+.++.-.++.+
T Consensus 277 v~~~~--------------~i~~~~~~~~~~~T~~-~~pl~~aaa~a~l~~l~~~~~~~~~~ 323 (420)
T TIGR00700 277 VTGRA--------------EIMDAPAPGGLGGTYA-GNPLACAAALAVLAIIESEGLIERAR 323 (420)
T ss_pred EEecH--------------HHHhhcCCCCcCCCCC-cCHHHHHHHHHHHHHHHhccHHHHHH
Confidence 88876 4555543322222333 34566667778888876643333333
No 345
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.16 E-value=1.8e-09 Score=105.66 Aligned_cols=267 Identities=9% Similarity=0.026 Sum_probs=140.9
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc------C
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------K 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------~ 131 (356)
-+|+|.+++.+.+.... ...... + ..+...++.+.+++++....+.+.|++||++++..+++... .
T Consensus 64 ~~p~v~~Ai~~ql~~l~-~~~~~~--~-----~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g 135 (466)
T PRK07030 64 ANPRINQRIKDQVDQLE-HVILAG--F-----SHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRG 135 (466)
T ss_pred CCHHHHHHHHHHHHhcC-Cccccc--c-----CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhC
Confidence 47999999999887521 011100 1 11223345577777765333466679999999998887542 1
Q ss_pred -C-CCeeeecCCCCCcccCcccc-----cccc--cccccceeeEEEecccCC--CCC-------CCCHHHHHHHhhh--c
Q 018401 132 -P-HDRIMALDLPHGGHLSHGYQ-----TDTK--KISAVSIFFETMPYRLNE--STG-------YIDYDQLEKSATL--F 191 (356)
Q Consensus 132 -~-gd~Vl~~~~~~~~~~~~~~~-----~~~~--~~~~~g~~~~~v~~~~~~--~~~-------~~d~~~l~~~i~~--~ 191 (356)
+ ..+|+.....|++....... .++. .....+ +..+|++... ..+ .-+++.+++.+.. .
T Consensus 136 ~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~ 213 (466)
T PRK07030 136 KPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLD--TIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHD 213 (466)
T ss_pred CCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCC--CEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 2 35677766554432110000 0000 000011 1223222110 000 1135667777753 2
Q ss_pred CCcEEEEcC-CC--CCCcc----cHHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCCCccEEEeCCCCcCCCC-
Q 018401 192 RPKLIVAGA-SA--YARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLRGP- 260 (356)
Q Consensus 192 ~~k~v~l~~-~n--~g~~~----~l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~~~D~~~~s~~K~l~gp- 260 (356)
++.+|++.| .. .|.+. -+++|.++|++||+++|+|++++ +|-... .....++ ..|+++++ |.|+|.
T Consensus 214 ~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~ 290 (466)
T PRK07030 214 EIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-RPDFLCLS--KALTGGY 290 (466)
T ss_pred ceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-CCCEEeee--hhccCCc
Confidence 566777766 32 34333 28899999999999999999985 332211 0011111 27999997 999765
Q ss_pred -CceEEEEecCcchhccCCcchhhhHHHhhccc------cCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccch
Q 018401 261 -RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA------VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVY 333 (356)
Q Consensus 261 -~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~ 333 (356)
+-|+++.++ ++.+.+... ...+..-+.|....++..++|+.+.++.-.++.++..-.+.
T Consensus 291 ~Pi~av~~~~--------------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~ 356 (466)
T PRK07030 291 LPLAAVLTTD--------------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMA 356 (466)
T ss_pred ccceEEEecH--------------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 347777777 444443211 01111122356677777788999987644455543332222
Q ss_pred HHHHhhhccccccccccCC
Q 018401 334 PAFVSNQNNSENIEEDKGR 352 (356)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~ 352 (356)
..+-... ....|++.+|+
T Consensus 357 ~~L~~l~-~~~~v~~vrG~ 374 (466)
T PRK07030 357 EATAHLA-DHPHVAEVRQT 374 (466)
T ss_pred HHHHHHh-cCCCEEEeEec
Confidence 2222222 23456666665
No 346
>PRK06917 hypothetical protein; Provisional
Probab=99.16 E-value=2.4e-09 Score=104.31 Aligned_cols=268 Identities=13% Similarity=0.051 Sum_probs=142.2
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------- 130 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------- 130 (356)
-+|+|.+++.+.+.... ..+... +. .+...++.+++.+.+....+.+.|++||++++..+++...
T Consensus 48 ~hp~v~~Ai~~ql~~~~-~~~~~~--~~-----~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~rg 119 (447)
T PRK06917 48 GVKEIADAIKEQAEEVS-FVYRSQ--FT-----SEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERG 119 (447)
T ss_pred CCHHHHHHHHHHHhhCc-Cccccc--cC-----CHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcC
Confidence 48999999999887521 111100 11 1233456677777765433455669999999998887551
Q ss_pred CC-CCeeeecCCCCCcccCccccc-----ccc--cccccceeeEEEecccCC-----CC-C---CCCHHHHHHHhhhc--
Q 018401 131 KP-HDRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNE-----ST-G---YIDYDQLEKSATLF-- 191 (356)
Q Consensus 131 ~~-gd~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~-----~~-~---~~d~~~l~~~i~~~-- 191 (356)
.+ ..+|+.....|.+...-.... .+. ...+.+ +..++.+... +. . .-+++.+++.+...
T Consensus 120 ~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~ 197 (447)
T PRK06917 120 IQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLED--YPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGA 197 (447)
T ss_pred CCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCC--CeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCC
Confidence 12 366777665444332111000 000 000001 1112211110 00 0 01345677777532
Q ss_pred -CCcEEEEcCCC--C-CCcc----cHHHHHHHHHHcCCEEEEeccchhhhcccC-C---CCCCCCCccEEEeCCCCcCCC
Q 018401 192 -RPKLIVAGASA--Y-ARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAG-V---IPSPFEYADVVTTTTHKSLRG 259 (356)
Q Consensus 192 -~~k~v~l~~~n--~-g~~~----~l~~I~~la~~~g~~vivD~a~~~g~~~~~-~---~~~~l~~~D~~~~s~~K~l~g 259 (356)
++.+|++.|-. . |.+. -+++|.++|++||+++|+|++|+ |.-..+ . ...++ ..|+++++ |.++|
T Consensus 198 ~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv-~PDi~~~g--K~l~~ 273 (447)
T PRK06917 198 EHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGV-EPDIMTLG--KGLGA 273 (447)
T ss_pred CceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCC-CCCEEEee--ehhcc
Confidence 46777776432 2 3333 28899999999999999999986 321111 1 11111 26998886 99976
Q ss_pred C--CceEEEEecCcchhccCCcchhhhHHHhhcccc---CCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchH
Q 018401 260 P--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV---FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYP 334 (356)
Q Consensus 260 p--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~ 334 (356)
. +.|++++++ ++.+.+.... +.+..-+.|...+++..++|+.+.++.-.++.++..-.+..
T Consensus 274 G~~Pi~a~~~~~--------------~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~ 339 (447)
T PRK06917 274 GYTPIAATVVSD--------------RVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIK 339 (447)
T ss_pred CCcceEEEEEcH--------------HHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 4 347777776 4555443211 11111233566677788889999765434454444333333
Q ss_pred HHHhhhccccccccccCCc
Q 018401 335 AFVSNQNNSENIEEDKGRP 353 (356)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~ 353 (356)
.+-..+.....+++.+|+-
T Consensus 340 ~L~~l~~~~~~i~~vrG~G 358 (447)
T PRK06917 340 GLQKVQQQSTIIGDVRGKG 358 (447)
T ss_pred HHHHHHhcCCCEEEEeecc
Confidence 3322233344667776653
No 347
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.16 E-value=2e-09 Score=104.26 Aligned_cols=240 Identities=10% Similarity=-0.009 Sum_probs=128.9
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK------ 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~------ 131 (356)
-+|+|.+++.+.+.+.. +.....+ . .+...++.+.+.+.+....+.+.|++||++|+..++.....
T Consensus 61 ~~p~v~~ai~~q~~~~~---~~~~~~~-~----~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g 132 (429)
T PRK06173 61 NHPRLNAAATNQLAKMS---HIMFGGF-T----HEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKG 132 (429)
T ss_pred CCHHHHHHHHHHHHhcC---Ccccccc-C----CHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhC
Confidence 47999999999887521 1111001 1 12223455777777654345666799999999988775421
Q ss_pred -C-CCeeeecCCCCCcc-cCcccc-----cccccc--cccceeeEEEecccCCC--C-CCCCHHHHHHHhhh--cCCcEE
Q 018401 132 -P-HDRIMALDLPHGGH-LSHGYQ-----TDTKKI--SAVSIFFETMPYRLNES--T-GYIDYDQLEKSATL--FRPKLI 196 (356)
Q Consensus 132 -~-gd~Vl~~~~~~~~~-~~~~~~-----~~~~~~--~~~g~~~~~v~~~~~~~--~-~~~d~~~l~~~i~~--~~~k~v 196 (356)
+ ..+|+.....|++. ...... .++... ...+ ...+|.+.... . ..-+++.|++.+.. .++.+|
T Consensus 133 ~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAv 210 (429)
T PRK06173 133 EVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPV--QYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAAL 210 (429)
T ss_pred CCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCC--CeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEE
Confidence 3 35677766554432 111100 000000 0011 12232221100 0 01246667777752 256777
Q ss_pred EEcCC--C-CCCcc----cHHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCCcCCCC--Cce
Q 018401 197 VAGAS--A-YARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGP--RGA 263 (356)
Q Consensus 197 ~l~~~--n-~g~~~----~l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K~l~gp--~gG 263 (356)
++.|- . .|... -+++|.++|++||+++|+|++| .|.-..+. ...+. ..|+++++ |.|+|. +.+
T Consensus 211 i~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv-~PDiv~~g--K~l~gG~~p~~ 286 (429)
T PRK06173 211 ILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGV-VPDIMCIG--KALTGGYLTLS 286 (429)
T ss_pred EEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCC-CCCEEEee--hhhhCCccccc
Confidence 77763 3 34332 2889999999999999999999 55311111 11111 37888865 998543 346
Q ss_pred EEEEecCcchhccCCcchhhhHHHhhccc----c-CCCCCCCCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 264 MIFFRKGVKEINKQGKEVFYDYEEKINQA----V-FPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 264 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~----~-~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
.++.++ ++.+.+... . ...++ ..+...+++..++|+.+.++.-.++.+
T Consensus 287 a~~~~~--------------~i~~~~~~~~~~~~~~~~T~-~g~p~~~aaa~a~l~~i~~~~~~~~~~ 339 (429)
T PRK06173 287 ATITTE--------------AIAQTICSGEAKCFMHGPTF-MANPLACAIAAESIRLLLESPWQQNIQ 339 (429)
T ss_pred eEEecH--------------HHHHHHhcCCCCccccCCCC-CcCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 666666 444444211 0 11112 245677778888999997653233333
No 348
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.16 E-value=1.7e-09 Score=105.78 Aligned_cols=268 Identities=12% Similarity=0.032 Sum_probs=141.0
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc------
Q 018401 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------ 130 (356)
Q Consensus 57 ~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------ 130 (356)
.-+|+|.+++.+.+.... .... .. ..+ +...++.+.+++++....+.+.|++||++++..+++...
T Consensus 72 h~~p~v~~Ai~~ql~~l~-~~~~--~~-~~~----~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~ 143 (460)
T PRK06916 72 HQVPELDEAIREQLNKIA-HSTL--LG-LAN----VPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNK 143 (460)
T ss_pred CCCHHHHHHHHHHHHhCC-Cccc--cc-cCC----HHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhc
Confidence 348999999999887521 1111 00 111 223345677877775433566679999999998877542
Q ss_pred -CC-CCeeeecCCCCCcccCccccc-----cccc--ccccceeeEEEecccCC---CCC------CCCHHHHHHHhhh--
Q 018401 131 -KP-HDRIMALDLPHGGHLSHGYQT-----DTKK--ISAVSIFFETMPYRLNE---STG------YIDYDQLEKSATL-- 190 (356)
Q Consensus 131 -~~-gd~Vl~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~~~v~~~~~~---~~~------~~d~~~l~~~i~~-- 190 (356)
.+ ..+|+.....|.+........ ++.. ....+ ...+|++... ... ..+++.+++.+..
T Consensus 144 g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~--~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 221 (460)
T PRK06916 144 GKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFE--AIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKH 221 (460)
T ss_pred CCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCC--CEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCC
Confidence 23 357777765544432100000 0000 00011 1223222100 000 1235667777752
Q ss_pred cCCcEEEEcC-CC--CCCcc----cHHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCCCCcCCCC
Q 018401 191 FRPKLIVAGA-SA--YARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGP 260 (356)
Q Consensus 191 ~~~k~v~l~~-~n--~g~~~----~l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~~K~l~gp 260 (356)
.++.+|++.| .. .|.+. -+++|.++|++||+++|+|++|. +|-.... ....++ ..|+++++ |.|+|.
T Consensus 222 ~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv-~PDiv~~g--K~l~gG 298 (460)
T PRK06916 222 EEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENV-TPDIMTAG--KGLTGG 298 (460)
T ss_pred CcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCC-CCCeeeee--hhhhcC
Confidence 2566777766 22 34332 28899999999999999999984 2221100 001111 27999886 988654
Q ss_pred --CceEEEEecCcchhccCCcchhhhHHHhhccc------cC-CCCCCCCcHHHHHHHHHHHHHHhcccccchhhccccc
Q 018401 261 --RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA------VF-PGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLH 331 (356)
Q Consensus 261 --~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~-~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~ 331 (356)
+-|+++.++ ++.+.+... .+ ..+++ .|...+++..++|+.+.++.-.++.++..-.
T Consensus 299 ~~Pi~av~~~~--------------ei~~~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~ 363 (460)
T PRK06916 299 YLPIAITVTTD--------------EIYNAFYGDYEEQKTFFHGHSYT-GNPLGCAVALANLELYEKTNLIEQVARKTEY 363 (460)
T ss_pred ccccceeeecH--------------HHHHHhhccccccCccccCCCCC-CCHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 237777776 344433211 11 11232 2566677777889988765434444443332
Q ss_pred chHHHHhhhccccccccccCCc
Q 018401 332 VYPAFVSNQNNSENIEEDKGRP 353 (356)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~ 353 (356)
....+-..+. ...+++.+|+-
T Consensus 364 l~~~l~~l~~-~~~v~~vrG~G 384 (460)
T PRK06916 364 VATQLEDLFA-LKHVGDIRQLG 384 (460)
T ss_pred HHHHHHHhhc-CCCeEEeecCC
Confidence 2222222122 34567776653
No 349
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.15 E-value=2.9e-09 Score=104.13 Aligned_cols=267 Identities=9% Similarity=-0.002 Sum_probs=138.2
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC-----CCCccccCCCchHHHHHHHHhhcC-
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-----DPEKWGGSLSGSPSNFQVYTALLK- 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-----~~~~v~v~~sgs~a~~~~l~al~~- 131 (356)
-+|+|.+++.+.+.. ....... .+. .+...++.+++.+.+.. +.+.+.|++||++|+..++.....
T Consensus 81 ~~p~i~~Ai~~q~~~-l~~~~~~--~~~-----~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~ 152 (472)
T PRK08742 81 AEPRIGAAIAAQAGE-LEQVMLA--GFT-----HEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHY 152 (472)
T ss_pred CCHHHHHHHHHHHHh-CCCcccc--ccC-----CHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHH
Confidence 489999999988764 1111110 011 12233455777776643 234666799999999988875421
Q ss_pred ------C-CCeeeecCCCCCccc-Cccccc----ccc--cccccceeeEEEecccCCC--CC-------CCCHHHHHHHh
Q 018401 132 ------P-HDRIMALDLPHGGHL-SHGYQT----DTK--KISAVSIFFETMPYRLNES--TG-------YIDYDQLEKSA 188 (356)
Q Consensus 132 ------~-gd~Vl~~~~~~~~~~-~~~~~~----~~~--~~~~~g~~~~~v~~~~~~~--~~-------~~d~~~l~~~i 188 (356)
+ ..+|+.....|.+.. ...... ++. .....+ +..+|.+.... .+ ..+++.+++.+
T Consensus 153 ~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~ 230 (472)
T PRK08742 153 FHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLE--SLFAPSPDAYLAEPGQSAEDYALQAADALQALF 230 (472)
T ss_pred HHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCC--CEEeCCCCccccccCCCHHHHHHHHHHHHHHHH
Confidence 2 357777765544332 111000 000 000001 12232221000 00 11356677777
Q ss_pred hh--cCCcEEEEcC-CC--CCCcc----cHHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCCCCc
Q 018401 189 TL--FRPKLIVAGA-SA--YARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKS 256 (356)
Q Consensus 189 ~~--~~~k~v~l~~-~n--~g~~~----~l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~~K~ 256 (356)
.. .++.+|++.| .. .|.+. -++++.++|++||+++|+|++++ +|-.... ....++ ..|+++++ |.
T Consensus 231 ~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~PDiv~~g--Kg 307 (472)
T PRK08742 231 EQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-MPDLLCLS--KG 307 (472)
T ss_pred HhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-CCCEEEEc--cc
Confidence 42 2567777766 22 45333 28899999999999999999985 4322110 111111 37999997 99
Q ss_pred CCCC--CceEEEEecCcchhccCCcchhhhHHHhhcccc-----CCCCCCCCcHHHHHHHHHHHHHHhcccccchhhccc
Q 018401 257 LRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV-----FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFS 329 (356)
Q Consensus 257 l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~ 329 (356)
|+|. +-|+++.++ ++.+.+.... ..+..-+.|....++..++|+.+.++.-.++.++..
T Consensus 308 l~gG~~Plaav~~~~--------------ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g 373 (472)
T PRK08742 308 LTGGFLPLSAVLATQ--------------QLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTA 373 (472)
T ss_pred ccCCCCCcceeeccH--------------HHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 9654 236677776 3444332111 111112235667777778899998764344444332
Q ss_pred ccchHHHHhhhccccccccccCC
Q 018401 330 LHVYPAFVSNQNNSENIEEDKGR 352 (356)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~ 352 (356)
-.+. ..+........|++.+|+
T Consensus 374 ~~l~-~~~~~~~~~~~i~dvRG~ 395 (472)
T PRK08742 374 ARMT-QLAAQIGEHPHVADVRQA 395 (472)
T ss_pred HHHH-HHHHHHhcCCCeeeEecc
Confidence 2111 222222223456666665
No 350
>PRK06148 hypothetical protein; Provisional
Probab=99.15 E-value=4.6e-09 Score=111.57 Aligned_cols=268 Identities=12% Similarity=0.073 Sum_probs=144.4
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh--cCCCCe
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL--LKPHDR 135 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al--~~~gd~ 135 (356)
-+|.|.+++.+.+.... ....+. .+...++.+++.+.+....+.+.|++||++|+..+++.. .....+
T Consensus 639 ~hp~v~~Ai~~q~~~l~----~~~~~~------~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ 708 (1013)
T PRK06148 639 AHPRVVAAAARQAARLN----TNTRYL------HDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRD 708 (1013)
T ss_pred CCHHHHHHHHHHHhhcC----CcCCcC------CHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCe
Confidence 37999999999887521 111111 123334557777776543355666999999999888754 233456
Q ss_pred eeecCCCCCcccCcccc----ccccc-ccccceeeEEEecc--cCCCCCCCC-------HHHHHHHhh---h--cCCcEE
Q 018401 136 IMALDLPHGGHLSHGYQ----TDTKK-ISAVSIFFETMPYR--LNESTGYID-------YDQLEKSAT---L--FRPKLI 196 (356)
Q Consensus 136 Vl~~~~~~~~~~~~~~~----~~~~~-~~~~g~~~~~v~~~--~~~~~~~~d-------~~~l~~~i~---~--~~~k~v 196 (356)
|++....|.+...-... .++.. .......+..++.+ ........+ .+.+++.+. . .++.+|
T Consensus 709 ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAv 788 (1013)
T PRK06148 709 AIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFF 788 (1013)
T ss_pred EEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEE
Confidence 77766544433211000 00000 00000001111111 000000011 134554443 1 246677
Q ss_pred EEcC--CCCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhccc---CCCCCCCCCccEEEeCCCCcCCCCCc-eEE
Q 018401 197 VAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA---GVIPSPFEYADVVTTTTHKSLRGPRG-AMI 265 (356)
Q Consensus 197 ~l~~--~n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~---~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l 265 (356)
++.| .+.|.+.+ +++|.++|++||+++|+|++|+ +|-... .....+. ..|+++++ |.++|... |++
T Consensus 789 I~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~PDivt~g--K~lggG~Plgav 865 (1013)
T PRK06148 789 IAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VPDIVTMG--KPIGNGHPMGAV 865 (1013)
T ss_pred EEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Ccceeeec--ccccCCcceEEE
Confidence 7763 33454444 8999999999999999999984 443221 1111111 37999987 99976433 778
Q ss_pred EEecCcchhccCCcchhhhHHHhhcccc-CCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhhcccc
Q 018401 266 FFRKGVKEINKQGKEVFYDYEEKINQAV-FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSE 344 (356)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (356)
++++ ++.+.+.... ...+++ -|..+.++..++|+.+.++.-.++.++..-.+...+-..+....
T Consensus 866 ~~~~--------------ei~~~~~~g~~~~~Tf~-gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~ 930 (1013)
T PRK06148 866 VTTR--------------EIADSFDNGMEYFNTFG-GNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFD 930 (1013)
T ss_pred EEcH--------------HHHhhccCCCccccCCC-CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7777 4555443321 122333 34556666778899998765455566554444444444444455
Q ss_pred ccccccCCc
Q 018401 345 NIEEDKGRP 353 (356)
Q Consensus 345 ~~~~~~~~~ 353 (356)
.|++.+|+-
T Consensus 931 ~i~~VrG~G 939 (1013)
T PRK06148 931 IIGDVRGMG 939 (1013)
T ss_pred CceEEeeec
Confidence 677777664
No 351
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.14 E-value=7e-10 Score=101.12 Aligned_cols=264 Identities=11% Similarity=0.003 Sum_probs=154.5
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC-cccc-CCCchHHHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE-KWGG-SLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~-~v~v-~~sgs~a~~~ 124 (356)
...|+.+++..+|++|++.+++.+.+....|.+-...-........+-..+++.++++++++.+ +|.| .+|+++...+
T Consensus 5 ~~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~ 84 (365)
T COG1932 5 RVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAM 84 (365)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHH
Confidence 3568888998899999999999887744323321111111133445556788999999999665 6777 7888888887
Q ss_pred HHHhhcCCCCe--eeecCCCCCcccCcccccccccccccceeeEEEecc-cCCCC-CCCCHHHHHHHhhhcCCcEEEEcC
Q 018401 125 VYTALLKPHDR--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR-LNEST-GYIDYDQLEKSATLFRPKLIVAGA 200 (356)
Q Consensus 125 ~l~al~~~gd~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~-~~~d~~~l~~~i~~~~~k~v~l~~ 200 (356)
+...++..+.. |.+-..+.. .+. .++..+......... ...+. ..++++... +.+ +...|.+|+
T Consensus 85 ~p~nLl~~~~~~yv~~g~Ws~~--------a~~-eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~-~~ayv~~~~ 152 (365)
T COG1932 85 APMNLLGKRGTDYVDTGAWSEF--------AIK-EAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD-NDAYVHFCW 152 (365)
T ss_pred HHHhhhcccCceeEeeeehhHh--------HHH-HHHHhcccccccccceeccCccCCCChhhcc--cCC-CccEEEEec
Confidence 88888766543 443321111 111 111111100001001 11111 234444432 333 344466775
Q ss_pred CC--CCCccc-HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhcc
Q 018401 201 SA--YARLYD-YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 276 (356)
Q Consensus 201 ~n--~g~~~~-l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 276 (356)
++ .|...+ ...+. . +.++++|.+..+...++|+.. .|++.++.+|.+ ||.| +++++++++-....
T Consensus 153 NeTi~Gv~v~~~p~~~---~--~~~~v~D~SS~ilsr~iDvsk-----~dviyagaQKnl-GpaGltvvIvr~~~l~r~~ 221 (365)
T COG1932 153 NETISGVEVPELPDIG---S--DGLLVADASSAILSRPIDVSK-----YDVIYAGAQKNL-GPAGLTVVIVRPDLLERAE 221 (365)
T ss_pred CCcccceEccCCCCCC---C--CceEEEecccHHhcCCCChhH-----cceEEEehhhcc-CccceEEEEEcHHHHhccc
Confidence 55 474443 22221 1 278999999888888877765 689999999987 7888 99999985321111
Q ss_pred CC-cchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHH
Q 018401 277 QG-KEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAF 336 (356)
Q Consensus 277 ~g-~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~ 336 (356)
.- .+ ...+..........+.||++..+.-+...++++.+..+.+.+.+..-..-..+
T Consensus 222 ~~~~P---~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~L 279 (365)
T COG1932 222 SYTLP---SIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLL 279 (365)
T ss_pred ccCCc---hHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 00 11 11111112222234589999999999999999999888776665544443333
No 352
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.14 E-value=7.9e-10 Score=103.94 Aligned_cols=266 Identities=11% Similarity=0.043 Sum_probs=137.7
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------- 130 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------- 130 (356)
-+|++.+++.+.+.... ...... ...+...++.+++.+.++-..+.+.+++||++|+..++....
T Consensus 33 ~~p~i~~ai~~~~~~~~-~~~~~~-------~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~~~ 104 (339)
T PF00202_consen 33 NHPEIAEAIAEQANKLN-YVSFSG-------FTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNKRA 104 (339)
T ss_dssp T-HHHHHHHHHHHHHCS-SCSTTT-------SEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTH
T ss_pred CccccchhHHHHhhhcc-cccccc-------eeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhccccccc
Confidence 47899999998876521 111011 011223345688888885444566779999999998887554
Q ss_pred -CCCCeeeecCCCCCcccCcccc-----cccc--cccccceeeEEEecccCCC--CCCCCHHHHHHH---hhhcCCcEEE
Q 018401 131 -KPHDRIMALDLPHGGHLSHGYQ-----TDTK--KISAVSIFFETMPYRLNES--TGYIDYDQLEKS---ATLFRPKLIV 197 (356)
Q Consensus 131 -~~gd~Vl~~~~~~~~~~~~~~~-----~~~~--~~~~~g~~~~~v~~~~~~~--~~~~d~~~l~~~---i~~~~~k~v~ 197 (356)
....+|+.....|.+....... ..+. .....+ +..+|++.... ...-..+++++. ....++.+|+
T Consensus 105 ~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi 182 (339)
T PF00202_consen 105 YTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPG--VVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVI 182 (339)
T ss_dssp HHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTT--EEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEE
T ss_pred ccCCceEEEeeeeeeccCcccccccCCccccccccccccc--cccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 2446788776555443210110 0010 111111 22233221100 000011122222 2223567778
Q ss_pred EcCCC--CCCcc----cHHHHHHHHHHcCCEEEEeccch-hhhcccCC--CCCCCCCccEEEeCCCCcCCCCCc-eEEEE
Q 018401 198 AGASA--YARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLRGPRG-AMIFF 267 (356)
Q Consensus 198 l~~~n--~g~~~----~l~~I~~la~~~g~~vivD~a~~-~g~~~~~~--~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~ 267 (356)
+.|-. .|... -+++|.++|++||+++|+|++++ +|-..... ...++ ..|+++++ |.|+|.-. |++++
T Consensus 183 vEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~p~sav~~ 259 (339)
T PF00202_consen 183 VEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVTFG--KGLGGGLPISAVLG 259 (339)
T ss_dssp EESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEEEE--GGGGTTSSEEEEEE
T ss_pred EeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccc-cCcccccc--cchhhhhhcccccc
Confidence 87543 35333 28899999999999999999985 32211100 00111 26999998 99965444 88888
Q ss_pred ecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhhccccccc
Q 018401 268 RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIE 347 (356)
Q Consensus 268 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (356)
++ ++.+.+.......+++ -+..+.++..+.|+.++++.-.++.++........+-..+.+...|.
T Consensus 260 ~~--------------~i~~~~~~~~~~~T~~-g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~ 324 (339)
T PF00202_consen 260 SE--------------EIMEAFQPGSHGSTFG-GNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELAARYPLIG 324 (339)
T ss_dssp EH--------------HHHTTSCTTSSTCTTT-T-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred cc--------------hhhccccccccccccc-cchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 87 4555443322222222 34456677778899998764444555443333333322233334555
Q ss_pred cccC
Q 018401 348 EDKG 351 (356)
Q Consensus 348 ~~~~ 351 (356)
+.+|
T Consensus 325 ~vrg 328 (339)
T PF00202_consen 325 EVRG 328 (339)
T ss_dssp EEEE
T ss_pred EEee
Confidence 4443
No 353
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.14 E-value=2.5e-09 Score=104.57 Aligned_cols=279 Identities=10% Similarity=0.109 Sum_probs=146.5
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCC---Ccccc-CCC
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP---EKWGG-SLS 117 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~---~~v~v-~~s 117 (356)
..|++..+-. .-+|.|.+++.+.+..... +... .+. + +.+.++.+.+.+.+...- +.+.| ++|
T Consensus 64 ~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~--~~~~-~~~-~----~~~~~la~~L~~~~p~~~~~~~~v~f~~~S 135 (464)
T PRK06938 64 QFIDCLAGAGTLALGHNHPVVIEAIQQVLADELP--LHTL-DLT-T----PVKDQFVQDLFASLPEAFAREAKIQFCGPT 135 (464)
T ss_pred EEEEccCCccccccCCCCHHHHHHHHHHHHhhhc--cccc-ccC-C----HHHHHHHHHHHHhCcccccccceEEEeCCC
Confidence 3456544422 2489999999998864221 1110 111 1 222234456666543221 24556 479
Q ss_pred chHHHHHHHHhh--cCCCCeeeecCCCCCcccCccccc-----ccccc--cccceeeEEEecccCCCC--C-------CC
Q 018401 118 GSPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQT-----DTKKI--SAVSIFFETMPYRLNEST--G-------YI 179 (356)
Q Consensus 118 gs~a~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~-----~~~~~--~~~g~~~~~v~~~~~~~~--~-------~~ 179 (356)
|++++..+++.. .....+|+.....|++........ ++... ...+ +..++++..... + ..
T Consensus 136 GSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~ 213 (464)
T PRK06938 136 GTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPG--VQFLPYPYDYRCPFGLGGEAGVRA 213 (464)
T ss_pred cHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCC--cEEeCCCccccccccCchhhHHHH
Confidence 999999888754 233467777665444332111100 00000 0011 223433321000 0 12
Q ss_pred CHHHHHHHhhhc-----CCcEEEEcCCC--CCCcc----cHHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCCC
Q 018401 180 DYDQLEKSATLF-----RPKLIVAGASA--YARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEY 245 (356)
Q Consensus 180 d~~~l~~~i~~~-----~~k~v~l~~~n--~g~~~----~l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~~ 245 (356)
+++.+++.+.+. ++.+|++.|-. .|.+. -+++|.++|++||+++|.|++++ +|-... .....++ .
T Consensus 214 ~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv-~ 292 (464)
T PRK06938 214 NLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI-I 292 (464)
T ss_pred HHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC-C
Confidence 367778877531 36677776433 34333 28899999999999999999985 332110 0011111 2
Q ss_pred ccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccch
Q 018401 246 ADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSH 324 (356)
Q Consensus 246 ~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~ 324 (356)
.|+++++ |.++|.-. |+++.++ ++ +.+.......+++ -|..+.++..+.|+.+.++.-.++
T Consensus 293 PDiv~~g--KglggG~PlsAv~~~~--------------~~-~~~~~~~~~~T~~-gnpla~Aaa~a~L~~l~~~~l~~~ 354 (464)
T PRK06938 293 PDVVVLS--KAIGGSLPLAVVVYRE--------------WL-DTWQPGAHAGTFR-GNQMAMAAGSATLRYIKEHRLAEH 354 (464)
T ss_pred CCEEEee--ccccCCCceEEEeehh--------------Hh-hccCCCCCCCCCC-cCHHHHHHHHHHHHHHHHhHHHHH
Confidence 7999997 99865433 7777766 32 3222111122233 345567777788999987654555
Q ss_pred hhcccccchHHHHhhhccccccccccCCcc
Q 018401 325 IHVFSLHVYPAFVSNQNNSENIEEDKGRPC 354 (356)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (356)
.++..-.+...+-..+...-.|++.+|+.+
T Consensus 355 ~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl 384 (464)
T PRK06938 355 AAAMGERLREHLRQLQRDYPQLGDVRGRGL 384 (464)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeeeeccce
Confidence 555443333333333333456888887754
No 354
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.13 E-value=6.5e-09 Score=101.24 Aligned_cols=279 Identities=11% Similarity=0.053 Sum_probs=141.9
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC--CCcccc-CCCc
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGG-SLSG 118 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~--~~~v~v-~~sg 118 (356)
..|++..+-. .-+|+|.+++.+.+.... +....++ ..+...++.+++.+++... ...++| ++||
T Consensus 40 ~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~---~~~~~~~-----~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sG 111 (442)
T TIGR00709 40 EYLDFLAGAGTLALGHNHPNMKQKILDYLQSGL---PLHTLDL-----TTPLKDAFIEALLNIIPKRKMDYKLQFPGPSG 111 (442)
T ss_pred EEEEccccHhhhcCCCCCHHHHHHHHHHHHhcc---Ccccccc-----CcHHHHHHHHHHHHhCCCcCCCccEEEeCCCH
Confidence 4566654422 248999999999887521 0111111 1133334557777776532 124455 6899
Q ss_pred hHHHHHHHHhh--cCCCCeeeecCCCCCcccCccccc-----ccc--cccccceeeEEEecccCCC-----CCCCCH---
Q 018401 119 SPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNES-----TGYIDY--- 181 (356)
Q Consensus 119 s~a~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~-----~~~~d~--- 181 (356)
++++..+++.. .....+|+.....|.+........ ++. .....+ +..++++.... ....+.
T Consensus 112 sEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (442)
T TIGR00709 112 ADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPG--VQFMPYPHEYRCPFGIGGEAGSNAS 189 (442)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCC--cEEeCCCccccccccCCchhHHHHH
Confidence 99999888754 233456777665444332111100 000 001111 22232221100 000011
Q ss_pred -HHHHHHhhh-----cCCcEEEEcC--CCCCCc-c---cHHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCCCc
Q 018401 182 -DQLEKSATL-----FRPKLIVAGA--SAYARL-Y---DYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYA 246 (356)
Q Consensus 182 -~~l~~~i~~-----~~~k~v~l~~--~n~g~~-~---~l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~~~ 246 (356)
+.+++.+.. .++.+|++.| .+.|.. . -+++|.++|++||+++|+|++++ +|.... .....+. ..
T Consensus 190 ~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~P 268 (442)
T TIGR00709 190 IEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGI-EP 268 (442)
T ss_pred HHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCC-CC
Confidence 223333321 2466777763 233433 2 38899999999999999999985 332110 0011111 36
Q ss_pred cEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchh
Q 018401 247 DVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHI 325 (356)
Q Consensus 247 D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~ 325 (356)
|+++++ |.+++.-- |+++.++ ++ +.+.......+ .+.|....++..++|+.+.++.-.++.
T Consensus 269 Div~~g--K~l~~G~Pigav~~~~--------------~~-~~~~~~~~~~T-~~gnpla~aaa~a~L~~i~~~~l~~~~ 330 (442)
T TIGR00709 269 DFVVMS--KAVGGGLPLAVLLIAP--------------EF-DAWQPAGHTGT-FRGNQLAMVTGTEALNYWKDDNLAQNA 330 (442)
T ss_pred cEEEEc--ccccCCcccEEEEEch--------------HH-hccCCCcCCCC-CCcCHHHHHHHHHHHHHHHhcCHHHHH
Confidence 999976 99865322 7777776 32 22221111122 235566777778889988765433444
Q ss_pred hcccccchHHHHhhhccccccccccCCcc
Q 018401 326 HVFSLHVYPAFVSNQNNSENIEEDKGRPC 354 (356)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (356)
++..-.+...+-..+.....|++.+|+-+
T Consensus 331 ~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl 359 (442)
T TIGR00709 331 QERGERITSFLDDMIKEHPCIGNVRGRGL 359 (442)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeeeeccce
Confidence 43333333333222334456778777643
No 355
>PRK07036 hypothetical protein; Provisional
Probab=99.13 E-value=7e-09 Score=101.50 Aligned_cols=270 Identities=11% Similarity=0.059 Sum_probs=139.5
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc------C
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------K 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------~ 131 (356)
-+|+|.+++.+.+... ..... + . ....+...++.+++.+.+....+.+.|++||++++..+++... .
T Consensus 68 ~~p~v~~Ai~~q~~~~-~~~~~---~-~--~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g 140 (466)
T PRK07036 68 GREEMADAIADQARRL-PYYTP---F-G--DMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRG 140 (466)
T ss_pred CCHHHHHHHHHHHHhC-ccccc---c-c--ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcC
Confidence 3799999999887652 10110 0 0 0011223345577777765434566679999999998877531 1
Q ss_pred -C-CCeeeecCCCCCccc-Cccc----ccccccccccceeeEEEecccCCC-CCCC--------CHHHHHHHhhh---cC
Q 018401 132 -P-HDRIMALDLPHGGHL-SHGY----QTDTKKISAVSIFFETMPYRLNES-TGYI--------DYDQLEKSATL---FR 192 (356)
Q Consensus 132 -~-gd~Vl~~~~~~~~~~-~~~~----~~~~~~~~~~g~~~~~v~~~~~~~-~~~~--------d~~~l~~~i~~---~~ 192 (356)
+ ..+|+.....|.+.. .... ..++....-....+..++.+.... .... .++.+++.+.. .+
T Consensus 141 ~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 220 (466)
T PRK07036 141 RPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADN 220 (466)
T ss_pred CCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCc
Confidence 2 356777665444321 1000 000000000000111222221000 0011 12445555532 24
Q ss_pred CcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcc--cCCC-CCCCCCccEEEeCCCCcCCCC--
Q 018401 193 PKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVA--AGVI-PSPFEYADVVTTTTHKSLRGP-- 260 (356)
Q Consensus 193 ~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~--~~~~-~~~l~~~D~~~~s~~K~l~gp-- 260 (356)
+.+|++.|.. .|...+ +++|.++|++||+++|+|++|+ +|-.. .... ..++ ..|+++++ |.++|.
T Consensus 221 iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~PDivt~g--K~l~gG~~ 297 (466)
T PRK07036 221 IAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QPDIITFA--KGLTSGYQ 297 (466)
T ss_pred eEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CCCEEEEc--cccccCcc
Confidence 6677776433 465554 8999999999999999999984 43321 1111 1111 26999987 999764
Q ss_pred CceEEEEecCcchhccCCcchhhhHHHhhccc------cCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchH
Q 018401 261 RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA------VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYP 334 (356)
Q Consensus 261 ~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~ 334 (356)
+-|++++++ ++.+.+... ...+..-+-|....++..++|+.+.++.-.++.++..-.+..
T Consensus 298 Pi~av~~~~--------------~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~ 363 (466)
T PRK07036 298 PLGAVIISE--------------RLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEE 363 (466)
T ss_pred ccEEEEEcH--------------HHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 346677776 454444321 111111233566677788889999765444555544333333
Q ss_pred HHHhhhccccccccccCC
Q 018401 335 AFVSNQNNSENIEEDKGR 352 (356)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~ 352 (356)
.+-. ..+...|++.+|+
T Consensus 364 ~L~~-l~~~~~v~~vrG~ 380 (466)
T PRK07036 364 RLAS-LRELPLVGDVRGD 380 (466)
T ss_pred HHHH-hccCCCEEEEEee
Confidence 3321 1223456666654
No 356
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.13 E-value=3.3e-09 Score=102.90 Aligned_cols=241 Identities=13% Similarity=0.018 Sum_probs=127.2
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCC-CccccCCCchHHHHHHHHhh--cCCCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP-EKWGGSLSGSPSNFQVYTAL--LKPHD 134 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~-~~v~v~~sgs~a~~~~l~al--~~~gd 134 (356)
-+|.+.+++.+.+.+.. +..... ..+ . ...++.+.+.+..+.+. +.+.|++||++++..++... ...+.
T Consensus 58 ~~~~i~~a~~~~~~~~~---~~~~~~-~~~---~-~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~ 129 (425)
T PRK08088 58 LHPKVVAAVEAQLKKLS---HTCFQV-LAY---E-PYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRS 129 (425)
T ss_pred CCHHHHHHHHHHHhhCC---Cccccc-cCC---H-HHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCC
Confidence 38999999999887521 111100 011 1 12245577777776543 35667889998888766543 22334
Q ss_pred eeeecCCCCCcccCccccc------ccccc--cccceeeEEEecccCCCCCCC--CHHHHHHHhh----hcCCcEEEEcC
Q 018401 135 RIMALDLPHGGHLSHGYQT------DTKKI--SAVSIFFETMPYRLNESTGYI--DYDQLEKSAT----LFRPKLIVAGA 200 (356)
Q Consensus 135 ~Vl~~~~~~~~~~~~~~~~------~~~~~--~~~g~~~~~v~~~~~~~~~~~--d~~~l~~~i~----~~~~k~v~l~~ 200 (356)
.|+.....|.+........ +..+. ...+ +..++++.+..+... +++++++.+. ..+..+|++.|
T Consensus 130 ~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Ep 207 (425)
T PRK08088 130 GVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGH--VYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEP 207 (425)
T ss_pred eEEEECCccCCccHHHHHhhCCCCccccCCCCCCCC--cEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECc
Confidence 5665565544432111110 00000 0011 111222322111111 1556888775 22566777764
Q ss_pred CC--CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccC-CC---CCCCCCccEEEeCCCCcCCCC-CceEEEEec
Q 018401 201 SA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG-VI---PSPFEYADVVTTTTHKSLRGP-RGAMIFFRK 269 (356)
Q Consensus 201 ~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~-~~---~~~l~~~D~~~~s~~K~l~gp-~gG~l~~~~ 269 (356)
.. -|...+ +++|.++|++||+++|.|++|+ |....+ .. ..+ ...|+.++ +|.+++. +-|+++.++
T Consensus 208 i~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~~~~~~~~-~~pdi~s~--sK~l~~G~rig~v~~~~ 283 (425)
T PRK08088 208 VQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTLFAMEQMG-VAADLTTF--AKSIAGGFPLAGVTGRA 283 (425)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhHHhhcC-CCCCEEEE--eccccCCCcceeeEecH
Confidence 33 344333 8899999999999999999986 221111 10 111 02566555 5988632 238888876
Q ss_pred CcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 270 GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
++.+.+........++ .+.+..++..+.++.+..+.-.++.|.
T Consensus 284 --------------~~~~~~~~~~~~~t~~-~~~~~~~a~~~~l~~~~~~~~~~~~~~ 326 (425)
T PRK08088 284 --------------EVMDAIAPGGLGGTYA-GNPIACAAALAVLKVFEQENLLQKANA 326 (425)
T ss_pred --------------HHHhhcCCCCCCCCCC-cCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 5555554432222233 455667777778887755433334443
No 357
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.11 E-value=7.2e-09 Score=100.08 Aligned_cols=233 Identities=12% Similarity=0.051 Sum_probs=121.7
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC--C-Ccccc-CCCchHHHHHHHHhh--cC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--P-EKWGG-SLSGSPSNFQVYTAL--LK 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~--~-~~v~v-~~sgs~a~~~~l~al--~~ 131 (356)
-+|+|.+++.+.+... ++.....+ ..+...++.+++++....+ . ..+.| ++||++++..+++.. ..
T Consensus 52 ~~p~v~~ai~~ql~~~---~~~~~~~~-----~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~t 123 (412)
T TIGR02407 52 NNPKLKQALIDYLADD---GIIHSLDM-----ATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVT 123 (412)
T ss_pred CCHHHHHHHHHHHhhc---cceecccc-----CcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhc
Confidence 4899999999988642 11111000 1122234456666654211 1 23556 589999999888765 23
Q ss_pred CCCeeeecCCCCCcccCcccc-----cccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh-----cCCcEEEEcC-
Q 018401 132 PHDRIMALDLPHGGHLSHGYQ-----TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----FRPKLIVAGA- 200 (356)
Q Consensus 132 ~gd~Vl~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~-----~~~k~v~l~~- 200 (356)
...+|+.....|++.-.-... .++.........+..+|++.......-+++.+++.+.+ .++.+|++.|
T Consensus 124 gr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi 203 (412)
T TIGR02407 124 GRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETV 203 (412)
T ss_pred CCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccc
Confidence 346787766554433211000 01111000000122233221000001247778888753 1456777763
Q ss_pred -CCCCCc----ccHHHHHHHHHHcCCEEEEeccch-hhhc----ccCCCCCCCCCccEEEeCCCCcCCC-C-CceEEEEe
Q 018401 201 -SAYARL----YDYERIRKVCNKQKAIMLADMAHI-SGLV----AAGVIPSPFEYADVVTTTTHKSLRG-P-RGAMIFFR 268 (356)
Q Consensus 201 -~n~g~~----~~l~~I~~la~~~g~~vivD~a~~-~g~~----~~~~~~~~l~~~D~~~~s~~K~l~g-p-~gG~l~~~ 268 (356)
.+.|.. .-+++|.++|++||+++|.|++|+ +|.. ....... ..|+++++ |++++ . +-|+++.+
T Consensus 204 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v---~PDi~~~~--K~lg~~G~pigav~~~ 278 (412)
T TIGR02407 204 QGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGI---EPDIVCLS--KSISGYGLPLALTLIK 278 (412)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCC---CCCEEEec--hhccCCccceeEEEEc
Confidence 234542 238899999999999999999986 3321 1111112 27988876 99854 2 23888887
Q ss_pred cCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH-Hhcc
Q 018401 269 KGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ-VCTL 319 (356)
Q Consensus 269 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~-~~~~ 319 (356)
++ + +.+........+ +.+....++..++++. +.++
T Consensus 279 ~~--------------~-~~~~~~~~~~T~-~gnpl~~aaa~a~l~~~i~~~ 314 (412)
T TIGR02407 279 PE--------------L-DVWKPGEHNGTF-RGNNLAFVTATAALEYYWSDD 314 (412)
T ss_pred hh--------------h-hccCCCccCCCC-CccHHHHHHHHHHHHHHhccc
Confidence 63 2 222211111122 3355566666788885 5543
No 358
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.11 E-value=7.6e-09 Score=100.33 Aligned_cols=208 Identities=14% Similarity=0.103 Sum_probs=110.8
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC--CC-cccc-CCC
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PE-KWGG-SLS 117 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~--~~-~v~v-~~s 117 (356)
..|++..+-. .-+|+|.+++.+.+... ++.....+ . .+...++.+.+.+.+..+ .+ .+.| ++|
T Consensus 40 ~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~---~~~~~~~~-~----~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s 111 (425)
T PRK09264 40 EYIDFFAGAGALNYGHNNPVLKQALIDYLQRD---GITHGLDM-H----TTAKREFLETFEETILKPRGLDYKVQFTGPT 111 (425)
T ss_pred EeeecccchhhccCCCCCHHHHHHHHHHHHhc---cccccccc-C----cHHHHHHHHHHHHhhcCCcCCCceEEEeCCC
Confidence 3566543322 24899999999887641 11111001 1 122233446666654221 22 4556 589
Q ss_pred chHHHHHHHHhh--cCCCCeeeecCCCCCcccC-ccc----ccccc--cccccceeeEEEecccCCCCCCCCHHHHHHHh
Q 018401 118 GSPSNFQVYTAL--LKPHDRIMALDLPHGGHLS-HGY----QTDTK--KISAVSIFFETMPYRLNESTGYIDYDQLEKSA 188 (356)
Q Consensus 118 gs~a~~~~l~al--~~~gd~Vl~~~~~~~~~~~-~~~----~~~~~--~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i 188 (356)
|++|+..+++.. .....+|+.....|++.-. ... ..++. +.... .+..+|++.......-|++++++.+
T Consensus 112 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~l~~~l 189 (425)
T PRK09264 112 GTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLN--NVTRMPYDGYFGGDVDTLAYLEKLL 189 (425)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCC--CeEEeCCCCccccchhHHHHHHHHH
Confidence 999999888754 2334567776654443311 000 00111 11111 1233433211000113678888888
Q ss_pred hhc-----CCcEEEEcC--CCCCCcc----cHHHHHHHHHHcCCEEEEeccch-hhh---c-ccCCCCCCCCCccEEEeC
Q 018401 189 TLF-----RPKLIVAGA--SAYARLY----DYERIRKVCNKQKAIMLADMAHI-SGL---V-AAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 189 ~~~-----~~k~v~l~~--~n~g~~~----~l~~I~~la~~~g~~vivD~a~~-~g~---~-~~~~~~~~l~~~D~~~~s 252 (356)
.+. ++.+|++.| .+.|... .+++|.++|++||+++|+|++|+ +|- . ....... ..|+++++
T Consensus 190 ~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v---~PDi~t~~ 266 (425)
T PRK09264 190 EDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGI---TPDIVTLS 266 (425)
T ss_pred HhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCC---CCCEEEec
Confidence 532 355777763 3345322 59999999999999999999995 221 1 1111111 26888876
Q ss_pred CCCcCCC-C-CceEEEEec
Q 018401 253 THKSLRG-P-RGAMIFFRK 269 (356)
Q Consensus 253 ~~K~l~g-p-~gG~l~~~~ 269 (356)
|.|++ . +-|++++++
T Consensus 267 --K~l~~~G~pigav~~~~ 283 (425)
T PRK09264 267 --KSISGYGLPMALVLIKP 283 (425)
T ss_pred --cccCCCccceEEEEEch
Confidence 98854 2 227888876
No 359
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.11 E-value=6.9e-09 Score=100.57 Aligned_cols=243 Identities=10% Similarity=0.028 Sum_probs=129.5
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC-----
Q 018401 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK----- 131 (356)
Q Consensus 57 ~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~----- 131 (356)
.-+|+|.+++.+.+.. ........ + . + +....+.++++++++..-+.+.+++||++++..++.....
T Consensus 61 h~~p~v~~ai~~~~~~-~~~~~~~~-~-~-~----~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~ 132 (427)
T TIGR00508 61 YNHPRLNAAAQKQIDK-MSHVMFGG-F-T-H----KPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAK 132 (427)
T ss_pred CCCHHHHHHHHHHHHh-cCCccccc-c-C-C----HHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhh
Confidence 3489999999998875 21011100 0 1 1 1123355777777654445667799999999887775421
Q ss_pred --C-CCeeeecCCCCCcccCccccccc-cc-cc--ccce--eeEEEecccCCC--C-CCCCHHHHHHHhhhc--CCcEEE
Q 018401 132 --P-HDRIMALDLPHGGHLSHGYQTDT-KK-IS--AVSI--FFETMPYRLNES--T-GYIDYDQLEKSATLF--RPKLIV 197 (356)
Q Consensus 132 --~-gd~Vl~~~~~~~~~~~~~~~~~~-~~-~~--~~g~--~~~~v~~~~~~~--~-~~~d~~~l~~~i~~~--~~k~v~ 197 (356)
+ ..+|+.....|.+.......+-. .. .. ..+. ....++.+.... . ..-|++++++.+... ++.+|+
T Consensus 133 ~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavi 212 (427)
T TIGR00508 133 GEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVI 212 (427)
T ss_pred CCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEE
Confidence 2 35677777555443211110000 00 00 0000 011122111100 0 012567777777532 455667
Q ss_pred EcC--CCCC-----CcccHHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCCcCCCC--CceE
Q 018401 198 AGA--SAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGP--RGAM 264 (356)
Q Consensus 198 l~~--~n~g-----~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K~l~gp--~gG~ 264 (356)
+.| ...| ...++++|.++|++||+++|+|++| .|.-..+. ...++ ..|++++ .|.|+|. +.++
T Consensus 213 vEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v-~pDi~~~--gK~l~gG~~p~~a 288 (427)
T TIGR00508 213 LEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGV-VPDILCV--GKALTGGYMTLSA 288 (427)
T ss_pred EechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCC-CCCEEEe--chhhhcCcccceE
Confidence 665 3443 3456899999999999999999999 44311111 01111 3788886 5998543 3366
Q ss_pred EEEecCcchhccCCcchhhhHHHhhcccc-----CCCCCCCCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 265 IFFRKGVKEINKQGKEVFYDYEEKINQAV-----FPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 265 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
++.++ ++.+.+.... ....++ .+..++++..++|+.+.++.-.++.+
T Consensus 289 ~~~~~--------------~~~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~~l~~~~~~~~~~ 340 (427)
T TIGR00508 289 TVTTD--------------KVAQTISSGEAGCFMHGPTFM-GNPLACAVAEASLAILLEGEWQKQVS 340 (427)
T ss_pred EEEcH--------------HHHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 77766 4545443211 111222 35677777888899887643233343
No 360
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.09 E-value=1.2e-09 Score=94.83 Aligned_cols=157 Identities=16% Similarity=0.102 Sum_probs=106.3
Q ss_pred HHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCC-CeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCC
Q 018401 99 KRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 177 (356)
Q Consensus 99 ~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 177 (356)
..++.--+..++++.+..|+.+.+.++++..+.|| ++|+..+|+| .+|...+.+.++.++.+ +.+ .++
T Consensus 76 ~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPty--------sMY~v~A~iNd~eVvkv--pl~-pdF 144 (375)
T KOG0633|consen 76 DALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTY--------SMYVVDAAINDAEVVKV--PLN-PDF 144 (375)
T ss_pred hhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcc--------eeEEEEeecCCceEEEe--cCC-CCc
Confidence 34444456677776665566689998999999999 8999998554 44444556677777666 454 358
Q ss_pred CCCHHHHHHHhhhc-CCcEEEEc-CCC-CCCcccHHHHHHHHHHc-CCEEEEeccch--hhhc--ccCCCCCCCCCccEE
Q 018401 178 YIDYDQLEKSATLF-RPKLIVAG-ASA-YARLYDYERIRKVCNKQ-KAIMLADMAHI--SGLV--AAGVIPSPFEYADVV 249 (356)
Q Consensus 178 ~~d~~~l~~~i~~~-~~k~v~l~-~~n-~g~~~~l~~I~~la~~~-g~~vivD~a~~--~g~~--~~~~~~~~l~~~D~~ 249 (356)
.+|.|.+.+.+... .+|+++++ |.| +|.....+.|.++..-- +.+|++|+|.. .|.. ..-+...+ -=++
T Consensus 145 ~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYp---NLiv 221 (375)
T KOG0633|consen 145 SLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYP---NLIV 221 (375)
T ss_pred cccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCC---ceee
Confidence 99999999888643 68999998 777 88877777777776543 68999999952 1100 00011222 3467
Q ss_pred EeCCCCcCC--CCCceEEEEec
Q 018401 250 TTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 250 ~~s~~K~l~--gp~gG~l~~~~ 269 (356)
+.+.+|.++ |-+-|+-++..
T Consensus 222 lqTlSKsfGLAGiRvG~~~~~~ 243 (375)
T KOG0633|consen 222 LQTLSKSFGLAGIRVGYGAFPL 243 (375)
T ss_pred hhhhhhhcCcceeEeecccccH
Confidence 788889762 33337777766
No 361
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.05 E-value=2.2e-08 Score=97.83 Aligned_cols=242 Identities=10% Similarity=0.006 Sum_probs=124.7
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCC-CccccCCCchHHHHHHHHhh--cCCCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP-EKWGGSLSGSPSNFQVYTAL--LKPHD 134 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~-~~v~v~~sgs~a~~~~l~al--~~~gd 134 (356)
-+|.|.+++.+.+.... +.....+ ..+...++.+.+.+++.... +.+.|++||++++..++... .....
T Consensus 71 ~~p~v~~ai~~q~~~~~---~~~~~~~-----~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~ 142 (451)
T PRK06918 71 SHPKVKEALHKQVDQYI---HTGFNVM-----MYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQ 142 (451)
T ss_pred CCHHHHHHHHHHHHhcc---Ccccccc-----ccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCC
Confidence 38999999999887521 1111000 11233445677888776432 46667999999999888754 23345
Q ss_pred eeeecCCCCCcccCccccc------ccc--cccccceeeEEEecccCC--CCCCCC-------HHHHHHHhh----hcCC
Q 018401 135 RIMALDLPHGGHLSHGYQT------DTK--KISAVSIFFETMPYRLNE--STGYID-------YDQLEKSAT----LFRP 193 (356)
Q Consensus 135 ~Vl~~~~~~~~~~~~~~~~------~~~--~~~~~g~~~~~v~~~~~~--~~~~~d-------~~~l~~~i~----~~~~ 193 (356)
+|+.....|++........ ++. +....+ +..+|++... ..+..+ ++.+++.+. ..++
T Consensus 143 ~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (451)
T PRK06918 143 GIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPE--VYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETI 220 (451)
T ss_pred cEEEECCCcCccchhhhhhcCCCccccccCCCCCCC--cEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCce
Confidence 6776664444332111100 000 000011 1223322110 001000 223443331 2256
Q ss_pred cEEEEcCCC--CCCcc----cHHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCCCccEEEeCCCCcCCCC-Cce
Q 018401 194 KLIVAGASA--YARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLRGP-RGA 263 (356)
Q Consensus 194 k~v~l~~~n--~g~~~----~l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~~~D~~~~s~~K~l~gp-~gG 263 (356)
.+|++.|.. .|.+. -+++|.++|++||+++|.|+++. +|.... .....+. ..|++++| |.+++. +-|
T Consensus 221 Aavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~t~s--K~l~~G~pig 297 (451)
T PRK06918 221 AAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLITVS--KSLGAGVPIS 297 (451)
T ss_pred EEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEEeee--hhhcCCCccE
Confidence 677776443 34323 28899999999999999999974 222110 0011110 26877654 988632 228
Q ss_pred EEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 264 MIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 264 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
+++.++ ++.+.+........+ ..+.+..++..++++.+.+..-.++.++
T Consensus 298 ~v~~~~--------------~i~~~~~~~~~~~T~-~g~~l~~aaa~a~l~~i~~~~~~~~~~~ 346 (451)
T PRK06918 298 GVIGRK--------------EIMDESAPGELGGTY-AGSPLGCAAALAVLDIIEKENLNDRAIE 346 (451)
T ss_pred EEEEcH--------------HHHhccCCCCcCcCC-CcCHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 888876 455544332222223 3445556666678888865433344443
No 362
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.05 E-value=2.2e-08 Score=97.83 Aligned_cols=278 Identities=13% Similarity=0.079 Sum_probs=143.0
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CC-cccc-CCCc
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PE-KWGG-SLSG 118 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~-~v~v-~~sg 118 (356)
..|++..+-. .-+|+|.+++.+.+.... ..... .+ ..+...++.+.+.+.+... .. .++| ++||
T Consensus 59 ~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~--~~~~~-~~-----~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SG 130 (459)
T PRK06931 59 QYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGL--PLHTL-DL-----TTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSG 130 (459)
T ss_pred EEEEcccchhhccCCCCCHHHHHHHHHHHhhhc--ccccc-cc-----CCHHHHHHHHHHHHhCCCccccceEEEeCCCc
Confidence 4566654432 248999999998876421 00000 01 1133334557777776532 11 3445 6899
Q ss_pred hHHHHHHHHhh--cCCCCeeeecCCCCCcccCccccc-----cccc--ccccceeeEEEecccCC---CC--CCCCHHHH
Q 018401 119 SPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQT-----DTKK--ISAVSIFFETMPYRLNE---ST--GYIDYDQL 184 (356)
Q Consensus 119 s~a~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~~~v~~~~~~---~~--~~~d~~~l 184 (356)
++++..+++.. ....++|+.....|++........ .+.. ....+ +..+|++... .+ ..-+.+.+
T Consensus 131 sEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (459)
T PRK06931 131 ADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPG--VQFMPYPHEYRCPLGIGGEAGVKAL 208 (459)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCC--cEEeCCCccccccccCCchhHHHHH
Confidence 99999888754 334567777765544432111100 0000 00112 2223322110 00 00122332
Q ss_pred ----HHHhhh-----cCCcEEEEcCC--CCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCCCc
Q 018401 185 ----EKSATL-----FRPKLIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYA 246 (356)
Q Consensus 185 ----~~~i~~-----~~~k~v~l~~~--n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~~~ 246 (356)
++.+.. .++.+|++.|- +.|...+ +++|.++|++||+++|+|++++ +|-... .....++ ..
T Consensus 209 ~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~P 287 (459)
T PRK06931 209 TYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EP 287 (459)
T ss_pred HHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CC
Confidence 333321 13567777633 2443332 8899999999999999999985 332110 0111111 27
Q ss_pred cEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchh
Q 018401 247 DVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHI 325 (356)
Q Consensus 247 D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~ 325 (356)
|+++++ |.++|.-- |++..++ ++ +.+.......++ +.|..+.++..+.|+.+.++.-.++.
T Consensus 288 Divt~g--K~l~gG~Pi~av~~~~--------------~~-~~~~~~~~~~T~-~gnpla~aaala~L~~l~~~~l~~~~ 349 (459)
T PRK06931 288 DIIVMS--KAVGGGLPLAVLGIKK--------------EF-DAWQPGGHTGTF-RGNQLAMATGLTTLKILKEENLAQNA 349 (459)
T ss_pred CEEEec--ccccCCcceeeeeeHH--------------HH-hhccCCCCCCCC-CCCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 999997 99865433 6666665 32 333221112223 24556677777889988776545555
Q ss_pred hcccccchHHHHhhhccccccccccCCc
Q 018401 326 HVFSLHVYPAFVSNQNNSENIEEDKGRP 353 (356)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (356)
++..-.+...+-..+...-.|++.+|+-
T Consensus 350 ~~~G~~l~~~L~~l~~~~~~i~~vrG~G 377 (459)
T PRK06931 350 AERGEWLKAQLAELQKRYPCIGNVRGRG 377 (459)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEeEecCc
Confidence 5544444444433333344677777653
No 363
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.05 E-value=9.5e-09 Score=99.79 Aligned_cols=155 Identities=12% Similarity=0.116 Sum_probs=85.3
Q ss_pred HHHHHHHhhh--cCCcEEEEcC--CCCCCc----ccHHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEE
Q 018401 181 YDQLEKSATL--FRPKLIVAGA--SAYARL----YDYERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVV 249 (356)
Q Consensus 181 ~~~l~~~i~~--~~~k~v~l~~--~n~g~~----~~l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~ 249 (356)
++++++.+.. .++.+|++.| .+.|.+ ..+++|.++|++||+++|+|++|+ +|..... ....++ ..|++
T Consensus 205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv-~PDi~ 283 (431)
T TIGR03251 205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-QPDIV 283 (431)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCC-CCCEE
Confidence 4556666642 2577788863 334543 358999999999999999999997 4332100 001111 37999
Q ss_pred EeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHH-hhc-cccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 250 TTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEE-KIN-QAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 250 ~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~-~~~-~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
+++ |.+ |.+|++..++ +. +..+ .+. ......++ +.+...+++..++|+.+.++.-.++.++
T Consensus 284 ~~g--K~~--~~~g~~~~~~-i~-----------~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a~L~~l~~~~l~~~~~~ 346 (431)
T TIGR03251 284 AFG--KKT--QVCGIMAGRR-VD-----------EVADNVFAVPSRLNSTW-GGNLVDMVRATRILEIIEEERLVDNARV 346 (431)
T ss_pred Eec--ccC--ccceEEecch-HH-----------HhhhhcccCccccCCCC-CCCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 876 865 4456665432 10 1111 011 00111122 2355677777888999876543455555
Q ss_pred ccccchHHHHhhhcccc-ccccccCCc
Q 018401 328 FSLHVYPAFVSNQNNSE-NIEEDKGRP 353 (356)
Q Consensus 328 ~~~~~~~~~~~~~~~~~-~~~~~~~~~ 353 (356)
....+...+-..+.... .+.+.+|+-
T Consensus 347 ~g~~l~~~L~~l~~~~~~~i~~vrg~G 373 (431)
T TIGR03251 347 QGAHLLARLHELAAEFPHLVSNPRGRG 373 (431)
T ss_pred HHHHHHHHHHHHHHhCccceecccccc
Confidence 44444433333333334 566666653
No 364
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.99 E-value=3.8e-08 Score=88.29 Aligned_cols=254 Identities=14% Similarity=0.126 Sum_probs=140.4
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc------C
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------K 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------~ 131 (356)
.+|.+++++++..+.-+ ..++-+| ..+..+..+.+.++||.+.- +-.++|.+++..++...- +
T Consensus 76 chpki~~aLqeq~~kLt---lssrafY------nd~~~~f~~~vt~lf~~~kv--lpmnTGaEa~Eta~KLaR~wgy~~K 144 (427)
T KOG1402|consen 76 CHPKIIKALQEQADKLT---LSSRAFY------NDVLGEFAEYVTKLFGYDKV--LPMNTGAEAVETACKLARKWGYRKK 144 (427)
T ss_pred CCHHHHHHHHHHHhHhh---hhhHHHh------hhhHHHHHHHHHHhcCccee--eecccchhHHHHHHHHHHHHHHhhc
Confidence 48999999988776421 1222222 23334566889999998642 226777888887665432 2
Q ss_pred --CCCe-eeec-CCC-CCcccCccccccc------ccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 018401 132 --PHDR-IMAL-DLP-HGGHLSHGYQTDT------KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 200 (356)
Q Consensus 132 --~gd~-Vl~~-~~~-~~~~~~~~~~~~~------~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~ 200 (356)
|.|+ ++++ ... |+-.+......-. .+.-+-| .+..| + .-|.++|+.+++..+.+.+++.|
T Consensus 145 ~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~-~~~~v--~------Y~d~eale~~l~~~~vaaFivEP 215 (427)
T KOG1402|consen 145 NIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPG-VVDKV--P------YGDAEALEVALKSPNVAAFIVEP 215 (427)
T ss_pred cCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCC-cceee--c------cCCHHHHHHHhcCCCeeEEEeec
Confidence 4343 2322 211 2222111110000 0000000 01112 1 12789999999876777777764
Q ss_pred CC--CCCccc----HHHHHHHHHHcCCEEEEeccchhhhccc------CCCCCCCCCccEEEeCCCCcCCCC-Cc-eEEE
Q 018401 201 SA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAA------GVIPSPFEYADVVTTTTHKSLRGP-RG-AMIF 266 (356)
Q Consensus 201 ~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~------~~~~~~l~~~D~~~~s~~K~l~gp-~g-G~l~ 266 (356)
-. -|.+.| +++..++|++|++++|.|+.|+ |.... +...- -.|+++.+ |.|.|. .. .+++
T Consensus 216 IQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQT-Gl~RTGk~la~d~env---~PDivilg--KalSGG~~Pvsavl 289 (427)
T KOG1402|consen 216 IQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQT-GLARTGKLLACDYENV---RPDIVILG--KALSGGVYPVSAVL 289 (427)
T ss_pred cccccceEeCCchhHHHHHHHHHhhcEEEEehhhhh-cccccCcEEEeehhhc---CCCeEEEe--ccccCCeeeeEEEE
Confidence 44 465554 8899999999999999999995 32211 11122 26899987 988652 22 4555
Q ss_pred EecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhhccc-cc
Q 018401 267 FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNS-EN 345 (356)
Q Consensus 267 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 345 (356)
+++ +++..+++.....++ .-|.++.+...+||+.+.++.-.++.+...--+..++..-|..+ .+
T Consensus 290 ~~~--------------~im~~~~pgeHgsTy-ggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~ 354 (427)
T KOG1402|consen 290 ADD--------------DIMLNIKPGEHGSTY-GGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHV 354 (427)
T ss_pred ecH--------------HHHhccCCCcccccc-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 555 344444433222222 23556777777999999887555555544434444444444442 34
Q ss_pred cccccCC
Q 018401 346 IEEDKGR 352 (356)
Q Consensus 346 ~~~~~~~ 352 (356)
|-+.+||
T Consensus 355 v~~VRGr 361 (427)
T KOG1402|consen 355 VKEVRGR 361 (427)
T ss_pred hheeecc
Confidence 5566555
No 365
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.98 E-value=5.3e-09 Score=95.74 Aligned_cols=125 Identities=18% Similarity=0.196 Sum_probs=76.8
Q ss_pred HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC----CccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhh
Q 018401 209 YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE----YADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFY 283 (356)
Q Consensus 209 l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~----~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~ 283 (356)
+++..++|+++|.++|.|++|+. .-..+ .-++++ -.|+++.+ |++++... |++++.+
T Consensus 235 lka~~~~v~k~Ggl~IaDEVqtG-fGRtG-~~wgfe~h~v~PDIvTmA--KgiGnG~Pl~AVvtt~-------------- 296 (442)
T KOG1404|consen 235 LKAAYKVVRKRGGLFIADEVQTG-FGRTG-HMWGFESHGVVPDIVTMA--KGIGNGFPLGAVVTTP-------------- 296 (442)
T ss_pred HHHHHHHHHHcCCEEEehhhhhc-ccccc-ccccccccCCCccHHHHH--hhccCCCcceeeecCH--------------
Confidence 89999999999999999999852 11112 223333 25888877 99965444 7777777
Q ss_pred hHHHhhcccc-CCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhhccccccccccCC
Q 018401 284 DYEEKINQAV-FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNNSENIEEDKGR 352 (356)
Q Consensus 284 ~~~~~~~~~~-~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (356)
++++-+.... .-.++|..++...+++ +.|+-+.++.--++..+-.-.+...+..-+....+|||.+||
T Consensus 297 EIa~v~~~~~~~fnTyggnP~a~avg~-aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~ 365 (442)
T KOG1404|consen 297 EIADVLNQKSSHFNTYGGNPVACAVGL-AVLKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGR 365 (442)
T ss_pred HHHHHHHhccccccccCCCchhHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccc
Confidence 4555444333 2223455555555554 668877765322222222222223334447788999999997
No 366
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.97 E-value=1.8e-08 Score=98.12 Aligned_cols=150 Identities=11% Similarity=0.097 Sum_probs=81.4
Q ss_pred CHHHHHHHhhhc--CCcEEEEcCC--CCCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCC-Cc
Q 018401 180 DYDQLEKSATLF--RPKLIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFE-YA 246 (356)
Q Consensus 180 d~~~l~~~i~~~--~~k~v~l~~~--n~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~-~~ 246 (356)
+++.+++++.++ ++.+|++.|- +.|.+.+ +++|.++|++||+++|+|++|+ |.-..+. ...++. ..
T Consensus 237 ~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGrtG~~fa~e~~gv~~~P 315 (464)
T TIGR00699 237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQT-GVGATGKFWAHEHWNLDDPP 315 (464)
T ss_pred HHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeee-CCCCCcchhHHHhcCCCCCC
Confidence 456677777532 4677777633 3466665 9999999999999999999984 3211110 111221 27
Q ss_pred cEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 247 DVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 247 D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
|+++++ |.+++ ||+++.++ .+ ...... ..+...+.|....++..++|+.+.++.-.++.+
T Consensus 316 Di~t~g--K~lg~--gG~~~~~~--------------~~-~~~~~~-~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~ 375 (464)
T TIGR00699 316 DMVTFS--KKFQT--AGYFFHDP--------------AF-RPNKPY-RQFNTWMGDPSRALILREIIQEIKRKDLLENVA 375 (464)
T ss_pred CEEEeh--hhhcc--CCccccch--------------hc-cCCCCc-ccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 998887 98842 24433322 11 000000 111122345566777778899997664445544
Q ss_pred cccccchHHHHhhhcccc-cccccc
Q 018401 327 VFSLHVYPAFVSNQNNSE-NIEEDK 350 (356)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~-~~~~~~ 350 (356)
+........+-....... .|++.+
T Consensus 376 ~~g~~l~~~L~~l~~~~~~~i~~vR 400 (464)
T TIGR00699 376 HVGDYLYTGLEDLQKKYPEFIQNLR 400 (464)
T ss_pred HHHHHHHHHHHHHHHhCCCceeeec
Confidence 333333222222222233 455555
No 367
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.95 E-value=1.8e-08 Score=104.15 Aligned_cols=161 Identities=12% Similarity=0.051 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-c--CCCCeeeecCCCCCcccCcccccccccccccceeeEEE
Q 018401 92 MAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-L--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 168 (356)
Q Consensus 92 ~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 168 (356)
+..-+.+..++++.|.+..+..+..++|++..+++++. . +++++|++++..|+.....+.. .+...|.+++.+
T Consensus 109 e~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t----~a~~~g~~v~~~ 184 (939)
T TIGR00461 109 EALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHT----RAKPFGIEVIVV 184 (939)
T ss_pred HHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHH----HHHhcCcEEEEE
Confidence 33336779999999999877777777776666566554 2 3458999999888766533321 123345444333
Q ss_pred ecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCcc
Q 018401 169 PYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAD 247 (356)
Q Consensus 169 ~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D 247 (356)
|+++|++.+ ++.++++..+| +|.+.|+++|.+++|++|++++++.-..+........++ |+|
T Consensus 185 -----------~~~~l~~~~---~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~---GaD 247 (939)
T TIGR00461 185 -----------DCSDIKKAV---DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHY---GAD 247 (939)
T ss_pred -----------cHHHHhhcC---CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHc---CCc
Confidence 445565554 35677777444 898889999999999999999997654443332222223 599
Q ss_pred EEEeCCCCcC-----CCCCceEEEEecCcch
Q 018401 248 VVTTTTHKSL-----RGPRGAMIFFRKGVKE 273 (356)
Q Consensus 248 ~~~~s~~K~l-----~gp~gG~l~~~~~~~~ 273 (356)
+++++++++. +||..|++.+++.+..
T Consensus 248 i~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r 278 (939)
T TIGR00461 248 IVLGSSQRFGVPMGYGGPHAAFFAVKDEYNR 278 (939)
T ss_pred EEeeCCCccCCCCCCCCCceeeeeecHhhHh
Confidence 9988877743 4666699999997643
No 368
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.93 E-value=4.3e-08 Score=93.28 Aligned_cols=271 Identities=12% Similarity=0.077 Sum_probs=139.5
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC-CCCccccCCCchHHHHHHHHhhc-----
Q 018401 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGGSLSGSPSNFQVYTALL----- 130 (356)
Q Consensus 57 ~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~v~v~~sgs~a~~~~l~al~----- 130 (356)
.-.+++.+++.+.+..-. ...+. .+.+ . . ..++.++++++..- +-+.+.|++|||+++..++...+
T Consensus 60 h~~~~i~~Ai~~Q~~~l~-~~~~~--~~t~---~-P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~ 131 (449)
T COG0161 60 HGRPEIAEAIKKQLDKLP-HVMFG--GFTH---E-P-AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRA 131 (449)
T ss_pred cCCHHHHHHHHHHHHhCC-chhhc--ccCC---c-h-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHh
Confidence 447999999998887621 01111 1111 1 2 22355788888773 35566669999999998776432
Q ss_pred --CCCC-eeeecCCC-CCcccCcccccc------c-ccccccceeeEEEecccCC-C--CCC----CCHHHHHHHhhhc-
Q 018401 131 --KPHD-RIMALDLP-HGGHLSHGYQTD------T-KKISAVSIFFETMPYRLNE-S--TGY----IDYDQLEKSATLF- 191 (356)
Q Consensus 131 --~~gd-~Vl~~~~~-~~~~~~~~~~~~------~-~~~~~~g~~~~~v~~~~~~-~--~~~----~d~~~l~~~i~~~- 191 (356)
+|.. +++.-... |+..+......- . ....+.+......|+.... . .+. -..++|++++..+
T Consensus 132 ~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g 211 (449)
T COG0161 132 RGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHG 211 (449)
T ss_pred cCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcC
Confidence 2433 35554433 333332111100 0 0000111111111111000 1 111 2367788888763
Q ss_pred --CCcEEEEcCCC---CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcc--cCCCCCCCCCccEEEeCCCCcCCC
Q 018401 192 --RPKLIVAGASA---YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVA--AGVIPSPFEYADVVTTTTHKSLRG 259 (356)
Q Consensus 192 --~~k~v~l~~~n---~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~--~~~~~~~l~~~D~~~~s~~K~l~g 259 (356)
+..++++.|-- .|.+.+ ++++.++|++||+++|.|++-+ +|-.. +.....+ -..|+++.+ |.|.|
T Consensus 212 ~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~g-i~PDi~~~a--KGLT~ 288 (449)
T COG0161 212 PETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAG-IVPDILCLA--KGLTG 288 (449)
T ss_pred cccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcC-CCCCeeeec--ccccc
Confidence 34566665332 344433 8899999999999999999832 22111 0001111 026999998 98865
Q ss_pred CCc--eEEEEecCcchhccCCcchhhhHHHhhccc----cCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccch
Q 018401 260 PRG--AMIFFRKGVKEINKQGKEVFYDYEEKINQA----VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVY 333 (356)
Q Consensus 260 p~g--G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~ 333 (356)
..- |+++++++ +.+.+... .+.+...+-|..+.++..+.|+.++++.-.++.++..-...
T Consensus 289 GY~Pl~a~l~~~~--------------I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~ 354 (449)
T COG0161 289 GYLPLSAVLTSDR--------------IYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQ 354 (449)
T ss_pred cchhhHhHhhhHH--------------HHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 333 55666663 33333221 22333344455566666678999987644455554443333
Q ss_pred HHHHhhhccccccccccCC
Q 018401 334 PAFVSNQNNSENIEEDKGR 352 (356)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~ 352 (356)
..+-+.+...-.++|.+++
T Consensus 355 ~~L~~~l~~~p~VgdVR~~ 373 (449)
T COG0161 355 AGLQAALADHPLVGDVRGL 373 (449)
T ss_pred HHHHHhcccCCcEEEeecc
Confidence 3333223333577777664
No 369
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.93 E-value=3.4e-08 Score=91.76 Aligned_cols=160 Identities=15% Similarity=0.158 Sum_probs=109.9
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cC--CCCeeeecCCCCCcccCcccccccccccccceeeEEEeccc
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 172 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 172 (356)
+.+..++++.|.+-.+-.+...+|++-.+++++. .. +..+++++...|+.+..... ..++-.|.+++.+ +.
T Consensus 124 efQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~----Tra~~~g~~i~~~--~~ 197 (450)
T COG0403 124 EFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLR----TRAEGLGIEIEVV--DA 197 (450)
T ss_pred HHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHH----hhcccCceEEEEe--cc
Confidence 4678899999998766667778887766666655 33 36899999988877654332 1222234444333 22
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CC-CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC-CccEE
Q 018401 173 NESTGYIDYDQLEKSATLFRPKLIVAGASA-YA-RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVV 249 (356)
Q Consensus 173 ~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g-~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~-~~D~~ 249 (356)
+ |++++++. .+..+..+++..+| +| ...++.+|.+.+|++|+++++= +..+.+.+...|.+ |+|++
T Consensus 198 ~------d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~----aDplaL~LL~pPGe~GADIv 266 (450)
T COG0403 198 D------DLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVA----ADPLALGLLKPPGEFGADIV 266 (450)
T ss_pred c------hhhhhhhc-cccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEE----echhHhhccCCccccCCceE
Confidence 2 77888877 44367888888555 78 7777999999999999987762 22233333333433 69999
Q ss_pred EeCCCC-----cCCCCCceEEEEecCcc
Q 018401 250 TTTTHK-----SLRGPRGAMIFFRKGVK 272 (356)
Q Consensus 250 ~~s~~K-----~l~gp~gG~l~~~~~~~ 272 (356)
+++++- +|+||.-|++.+++++.
T Consensus 267 vG~~QrfGvPmgfGGPhag~fA~~~~~~ 294 (450)
T COG0403 267 VGSAQRFGVPMGFGGPHAGYFAVKDEFK 294 (450)
T ss_pred EecCcccCCCcCCCCcceeeeeEhHhHh
Confidence 999998 45677779999999763
No 370
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.91 E-value=6.5e-08 Score=85.81 Aligned_cols=208 Identities=11% Similarity=0.099 Sum_probs=126.9
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCC-CCC-CccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEG-YPG-ARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPSN 122 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~-~~~-~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a~ 122 (356)
..|+|..+.+.--|++.+...+...+...++ +.. .-.|.+.++.+.+-+++.+.+.+.+|+ .+.++.+|+++..+.
T Consensus 31 g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~f 110 (417)
T COG3977 31 GAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAF 110 (417)
T ss_pred CceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchH
Confidence 4567766665556777777665444322222 111 123566677888888899999999998 566777787777666
Q ss_pred HHHHHhhc---CCCC--eeeec-CCCCCcccCcccc-----cccccccccceeeEEEecccCCC---CCCCCHHHHHHHh
Q 018401 123 FQVYTALL---KPHD--RIMAL-DLPHGGHLSHGYQ-----TDTKKISAVSIFFETMPYRLNES---TGYIDYDQLEKSA 188 (356)
Q Consensus 123 ~~~l~al~---~~gd--~Vl~~-~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~v~~~~~~~---~~~~d~~~l~~~i 188 (356)
.-++..+. ..|+ +|+.+ .++|.++-..+.. .++-.+ +..+. .+.+|+++|. +
T Consensus 111 FYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~i------------el~~~g~FKY~vDF~~l~--i 176 (417)
T COG3977 111 FYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNI------------ELLPAGQFKYHVDFEHLH--I 176 (417)
T ss_pred HHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCc------------ccccccceeeccCHHHcc--c
Confidence 65665552 3444 34444 5677665443321 111111 11111 2467888874 4
Q ss_pred hhcCCcEEEEc-CCC-CCCcc---cHHHHHHHHHHcCCEEEEeccchhhhcccCCC-CCCCC-CccEEEeCCCCcCCCC-
Q 018401 189 TLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVI-PSPFE-YADVVTTTTHKSLRGP- 260 (356)
Q Consensus 189 ~~~~~k~v~l~-~~n-~g~~~---~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~-~~~l~-~~D~~~~s~~K~l~gp- 260 (356)
.+ .+.+|+++ |+| ||.+. ++.+|.++|++||+++++|.|.+...-.+... ..+++ .--+.|+|.+| ++-|
T Consensus 177 ~e-~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK-~GLPG 254 (417)
T COG3977 177 GE-STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSK-LGLPG 254 (417)
T ss_pred cc-ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhh-cCCCC
Confidence 44 78899999 888 89554 46678888999999999999975432111111 12222 24488999999 4333
Q ss_pred -CceEEEEecC
Q 018401 261 -RGAMIFFRKG 270 (356)
Q Consensus 261 -~gG~l~~~~~ 270 (356)
+.|+++.+++
T Consensus 255 ~R~GIiIane~ 265 (417)
T COG3977 255 SRCGIIIANEK 265 (417)
T ss_pred cceeEEEccHH
Confidence 3388877774
No 371
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.91 E-value=4.1e-08 Score=87.07 Aligned_cols=168 Identities=18% Similarity=0.241 Sum_probs=110.5
Q ss_pred HHHHHHHHHcCCCCCcccc-CCCchHHHHHHHHhhcCCCCeeeecCC-CCCcccC-cccccccc-cccccceeeEEEecc
Q 018401 96 LCQKRALEAFRLDPEKWGG-SLSGSPSNFQVYTALLKPHDRIMALDL-PHGGHLS-HGYQTDTK-KISAVSIFFETMPYR 171 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v-~~sgs~a~~~~l~al~~~gd~Vl~~~~-~~~~~~~-~~~~~~~~-~~~~~g~~~~~v~~~ 171 (356)
.+.+-+|+.||++..-+-. .-|||.|+..++..+++|||+.+...- .|..... .+...... ...-.|++++.++
T Consensus 69 tLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~-- 146 (416)
T COG4100 69 TLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVP-- 146 (416)
T ss_pred HHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeecc--
Confidence 3448889999998764444 568899999899999999999886531 1110000 00000011 1223456676674
Q ss_pred cCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CC-----CcccHHHHHHHHHHc--CCEEEEeccchhhhcccCCCCCCC
Q 018401 172 LNESTGYIDYDQLEKSATLFRPKLIVAGASA-YA-----RLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPF 243 (356)
Q Consensus 172 ~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g-----~~~~l~~I~~la~~~--g~~vivD~a~~~g~~~~~~~~~~l 243 (356)
+. .++.+|++.+..++++ +||+|.+.-|. ++ .+.+++++..+.|+. +++++||.+.. -.--... |.
T Consensus 147 Lt-~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYG--EFvE~~E--Pt 220 (416)
T COG4100 147 LT-ADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYG--EFVEEKE--PT 220 (416)
T ss_pred cc-cCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccch--hhhhccC--cc
Confidence 44 4589999999999998 99999996332 33 455677777777775 68999999853 2221111 22
Q ss_pred C-CccEEEeCCCCcCCCC---CceEEEEecCc
Q 018401 244 E-YADVVTTTTHKSLRGP---RGAMIFFRKGV 271 (356)
Q Consensus 244 ~-~~D~~~~s~~K~l~gp---~gG~l~~~~~~ 271 (356)
. |+|++.+|.-|.-+|. .||++..+.++
T Consensus 221 ~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ 252 (416)
T COG4100 221 HVGADLIAGSLIKNPGGGIAKTGGYIAGKAEL 252 (416)
T ss_pred ccchhhhccceeeCCCCceeeccceeechHHH
Confidence 2 5999999999987653 34788887764
No 372
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.88 E-value=2.7e-08 Score=91.13 Aligned_cols=197 Identities=19% Similarity=0.171 Sum_probs=126.3
Q ss_pred CCeeecCCCCC----cHHHHHHHHhhhhccCCCCCCCCccCCCc-hhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHH
Q 018401 48 GLELIPSENFT----SVSVMQAVGSVMTNKYSEGYPGARYYGGN-EYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 48 ~i~L~~~~~~~----~~~V~~a~~~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~ 122 (356)
.+|+ ++.|++ .+++.+.....++. |+-|.-+.+.+.|+ +-..+++ +.+++++|++.. ++.+-|-.++
T Consensus 96 ~~N~-aS~NfL~l~~~~~ike~a~~~lrk-yGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~a--ivYs~gF~ti 167 (467)
T KOG1358|consen 96 VLNF-ASANFLGLIENEEIKEEASFTLRK-YGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTEDA--IVYSYGFSTI 167 (467)
T ss_pred eecc-cchhhhhhcccHHHHHHHHHHHHH-hCCCCcCCCcccccceeecccH----HHHHHhhCCcce--eeeccccchh
Confidence 3443 455653 68888888888876 55455555443333 3344555 889999999875 4555666666
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc------C----
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF------R---- 192 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~------~---- 192 (356)
..++.++.+.||.|.+... .......++++..-.. +.+. ..|.+++++.+.+. +
T Consensus 168 ~S~ipafsKrGDIi~~de~--------~nfaIq~GlqlSRS~i--~~Fk------hndm~~lerll~E~~~~~~K~~k~~ 231 (467)
T KOG1358|consen 168 ESAIPAFSKRGDIIFVDEA--------VNFAIQKGLQLSRSTI--SYFK------HNDMEDLERLLPEQEDEDQKNPKKA 231 (467)
T ss_pred hhcchhhhccCcEEEEehh--------hhHHHHHHHhhhhhee--EEec------CCCHHHHHHhccCcchhhhhccccc
Confidence 6689999999999998762 2222222444443222 2112 33677777665331 1
Q ss_pred -Cc-EEEEc--CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhccc---CC---CCCCCCCccEEEeCCCCcCCCCCc
Q 018401 193 -PK-LIVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAA---GV---IPSPFEYADVVTTTTHKSLRGPRG 262 (356)
Q Consensus 193 -~k-~v~l~--~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~---~~---~~~~l~~~D~~~~s~~K~l~gp~g 262 (356)
|+ .|++. ..|+|.+.|+.+|.++..+|..-+|+|++.++|.... ++ ..-+...+|++++|..-++++ .|
T Consensus 232 ~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas-~G 310 (467)
T KOG1358|consen 232 LTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALAS-GG 310 (467)
T ss_pred cceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccc-cC
Confidence 12 33443 7889999999999999999999999999999887653 11 111223689999998776643 34
Q ss_pred eEEEEec
Q 018401 263 AMIFFRK 269 (356)
Q Consensus 263 G~l~~~~ 269 (356)
|+...+.
T Consensus 311 gFc~G~~ 317 (467)
T KOG1358|consen 311 GFCAGKS 317 (467)
T ss_pred ceeecce
Confidence 6555533
No 373
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.86 E-value=3.1e-09 Score=98.17 Aligned_cols=168 Identities=20% Similarity=0.178 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHcCCCCC-ccccCCCchHHHHHHHHhh-c--CCC----------Ceee-ecCCCCCcccCcccccccc
Q 018401 92 MAESLCQKRALEAFRLDPE-KWGGSLSGSPSNFQVYTAL-L--KPH----------DRIM-ALDLPHGGHLSHGYQTDTK 156 (356)
Q Consensus 92 ~l~~~~~~~la~~~g~~~~-~v~v~~sgs~a~~~~l~al-~--~~g----------d~Vl-~~~~~~~~~~~~~~~~~~~ 156 (356)
.++.++-..+.+..|.+.+ .-+|..||+-+|.-++.+. - -|+ +-|+ +++..|.|+..
T Consensus 141 lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~k-------- 212 (510)
T KOG0629|consen 141 LMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKK-------- 212 (510)
T ss_pred eehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHH--------
Confidence 3455677888889999664 4466667775555444432 1 122 2333 33444555543
Q ss_pred cccccc---eeeEEEecccCCCCCCCCHHHHHHHhhhcCC-----cEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEe
Q 018401 157 KISAVS---IFFETMPYRLNESTGYIDYDQLEKSATLFRP-----KLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 157 ~~~~~g---~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~-----k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD 226 (356)
.+.+.| -.++.| +.+ +.+.+++++||+.|...+. -.|..+ .+. .|...|++.|+++|++|+.|+++|
T Consensus 213 aAa~lg~gtd~c~~v--~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvD 289 (510)
T KOG0629|consen 213 AAAFLGLGTDHCIKV--KTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVD 289 (510)
T ss_pred HHHHhccCCceeEEe--ccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEee
Confidence 222333 223334 555 6789999999998864332 233334 333 689999999999999999999999
Q ss_pred ccchhhhcccCCCC---CCCCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 227 MAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 227 ~a~~~g~~~~~~~~---~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
+|...|.+-..... .+.+.+|.++.++||+++.|.. ++++++.+
T Consensus 290 AAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~ 337 (510)
T KOG0629|consen 290 AAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREE 337 (510)
T ss_pred cccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHH
Confidence 99877665432221 3344689999999999888877 77776663
No 374
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.82 E-value=2.4e-07 Score=95.61 Aligned_cols=156 Identities=15% Similarity=0.035 Sum_probs=88.5
Q ss_pred HHHHHHhhh-------cCCcEEEEcCC--C-CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCC
Q 018401 182 DQLEKSATL-------FRPKLIVAGAS--A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFE 244 (356)
Q Consensus 182 ~~l~~~i~~-------~~~k~v~l~~~--n-~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~ 244 (356)
+.+++.+.. .++.+|++.|. . .|.+.+ +++|.++|++||+++|.||+++ +|-.... ....+.
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv- 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC- 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC-
Confidence 456666642 24567777663 3 354432 8899999999999999999974 2221100 011110
Q ss_pred CccEEEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhcc-----ccCCCCCCCCcHHHHHHHHHHHHHHh
Q 018401 245 YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQ-----AVFPGLQGGPHNHTITGLAVALKQVC 317 (356)
Q Consensus 245 ~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~gt~~~~~~~al~~Al~~~~ 317 (356)
..|+++++ |.|.|. +-|++++++ ++.+.+.. ....+...+-|..+.++..++|+.++
T Consensus 646 ~PDIi~~g--KgLtgG~~Plaa~l~~~--------------~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~ 709 (817)
T PLN02974 646 KPDIACYA--KLLTGGLVPLAATLATE--------------EVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYK 709 (817)
T ss_pred CCCEEeec--ccccCCCCccEEEEEcH--------------HHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHH
Confidence 27999999 999765 337777777 44444421 11122223455677777778899998
Q ss_pred cccccchhhccc--ccch--HHHHhhhccccccccccCCcc
Q 018401 318 TLITFSHIHVFS--LHVY--PAFVSNQNNSENIEEDKGRPC 354 (356)
Q Consensus 318 ~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~ 354 (356)
++.-.+++.+.. +..+ ..+.........|++.+|+-|
T Consensus 710 ~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl 750 (817)
T PLN02974 710 DPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGT 750 (817)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeee
Confidence 753223322221 1111 122122334567788877754
No 375
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.81 E-value=5.5e-08 Score=92.51 Aligned_cols=164 Identities=16% Similarity=0.141 Sum_probs=95.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh---cCCCCeeeecCCCCCcccCccccccccccccccee
Q 018401 88 EYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 164 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 164 (356)
++.-+..-+....++++.|.+..+..+..+++++-.+++++. -+.+++|+++...|+.+..... .-+...|.+
T Consensus 106 QG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~----t~a~~~g~~ 181 (429)
T PF02347_consen 106 QGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLR----TYAAPLGIE 181 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHH----HHCCHCCEE
T ss_pred HHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHH----HhhhhCCeE
Confidence 444444446779999999998766566666665444444433 3345699999988876643111 122334655
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCC
Q 018401 165 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF 243 (356)
Q Consensus 165 ~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l 243 (356)
++.+ +.+ +++..| .+ ++..|++..+| .|.+.++++|++++|++|+++++ ++- ...+.+...|.
T Consensus 182 iv~~--~~~-~~~~~d--------~~-~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad---~~aL~~l~~Pg 245 (429)
T PF02347_consen 182 IVEV--PLD-EDGTTD--------DD-DTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GAD---PNALGGLKSPG 245 (429)
T ss_dssp EEEE---BB-TTCSB---------ST-TEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGG---CCGCCTC--GG
T ss_pred EEEe--ccc-ccCCcc--------cc-CeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecC---HHHHhCcCChh
Confidence 6555 444 334444 33 78899998445 89999999999999999999887 543 22333333333
Q ss_pred C-CccEEEeCCCCcC------CCCCceEEEEecCcc
Q 018401 244 E-YADVVTTTTHKSL------RGPRGAMIFFRKGVK 272 (356)
Q Consensus 244 ~-~~D~~~~s~~K~l------~gp~gG~l~~~~~~~ 272 (356)
+ |+|++++. ||.| +||..|++.+++.+.
T Consensus 246 e~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~ 280 (429)
T PF02347_consen 246 EYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLV 280 (429)
T ss_dssp GGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGG
T ss_pred hcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhh
Confidence 3 69999666 8866 344448999999763
No 376
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.80 E-value=5.5e-08 Score=91.08 Aligned_cols=170 Identities=15% Similarity=0.200 Sum_probs=114.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCcccc-CCCchHHHHHHHHhh---cCC--C---CeeeecCCCCCcccCccccccccccc
Q 018401 89 YIDMAESLCQKRALEAFRLDPEKWGG-SLSGSPSNFQVYTAL---LKP--H---DRIMALDLPHGGHLSHGYQTDTKKIS 159 (356)
Q Consensus 89 ~~~~l~~~~~~~la~~~g~~~~~v~v-~~sgs~a~~~~l~al---~~~--g---d~Vl~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
....+++++-..++.+|+.+.+.+-. |.|+|++..++.... ... | ..++++...| ..+. ....
T Consensus 117 ~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~-----~a~e---K~a~ 188 (491)
T KOG1383|consen 117 VVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVH-----AAFE---KAAR 188 (491)
T ss_pred hhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHH-----HHHH---HHHh
Confidence 35678888889999999998664444 778887755444332 111 1 1233333222 1221 1233
Q ss_pred ccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHH-cCCEEEEeccchhhhcc-
Q 018401 160 AVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNK-QKAIMLADMAHISGLVA- 235 (356)
Q Consensus 160 ~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~-~g~~vivD~a~~~g~~~- 235 (356)
..+.+++.|+ +++.++.+|+..+.+.+++ +|.+++.. ++. +|...|+++|.++..+ +++.+++|++-+.-..|
T Consensus 189 yf~v~l~~V~--~~~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~ 265 (491)
T KOG1383|consen 189 YFEVELREVP--LDEGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPA 265 (491)
T ss_pred hEEEEEEeee--ccccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccc
Confidence 4455566674 4545689999999999998 89988887 444 7899999999999988 99999999984322222
Q ss_pred cCCC--CCCC--CCccEEEeCCCCcCCCCCc-eEEEEec
Q 018401 236 AGVI--PSPF--EYADVVTTTTHKSLRGPRG-AMIFFRK 269 (356)
Q Consensus 236 ~~~~--~~~l--~~~D~~~~s~~K~l~gp~g-G~l~~~~ 269 (356)
.... .++| .++-.++.++||+-..|.| +.++.+.
T Consensus 266 ~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~ 304 (491)
T KOG1383|consen 266 GYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRN 304 (491)
T ss_pred cccCccccccCCCCceeEeeccceeeeeecCcEEEEEcc
Confidence 1111 2222 2678999999998788999 7777665
No 377
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.80 E-value=2.8e-07 Score=84.74 Aligned_cols=220 Identities=15% Similarity=0.128 Sum_probs=126.9
Q ss_pred ChHHHHHHHHHHHHHH-cCCeeec-------CCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHH
Q 018401 31 DPEIADIIEHEKARQW-KGLELIP-------SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (356)
Q Consensus 31 ~~~~~~~~~~~~~~~~-~~i~L~~-------~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la 102 (356)
+.-+........+..+ +.|||.. +..|.-+.|.++-...+.+.. ...|-+-.+.+.+.+++. +
T Consensus 10 ~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~------~k~Yl~i~G~~~f~~~~~---~ 80 (396)
T COG1448 10 ADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEK------TKNYLPIEGLPEFLEAVQ---K 80 (396)
T ss_pred CCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcccc------ccccCCcCCcHHHHHHHH---H
Confidence 3334454444433332 6788863 333455667776666555432 233444455566654333 3
Q ss_pred HHcCCC-----CCccc-c-CCCchHHHHHHHHhh--cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 103 EAFRLD-----PEKWG-G-SLSGSPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 103 ~~~g~~-----~~~v~-v-~~sgs~a~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
-+||.+ ...+. + |.|||+|+..+..-+ ..|...|.+++|+.+.|.. -.+..|.++...|| .+
T Consensus 81 llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~--------If~~aGl~v~~Y~Y-yd 151 (396)
T COG1448 81 LLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA--------IFEAAGLEVETYPY-YD 151 (396)
T ss_pred HhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH--------HHHhcCCceeeeec-cc
Confidence 357743 33333 4 889998888544333 5677889999966555532 33456766766654 34
Q ss_pred CCCCCCCHHHHHHHhhhc-CCcEEEE--cCCC-CC---CcccHHHHHHHHHHcCCEEEEeccchhhhcc-cCCCCCCCC-
Q 018401 174 ESTGYIDYDQLEKSATLF-RPKLIVA--GASA-YA---RLYDYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPFE- 244 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~~~-~~k~v~l--~~~n-~g---~~~~l~~I~~la~~~g~~vivD~a~~~g~~~-~~~~~~~l~- 244 (356)
.++..+|++.+.+.+++- ...+|++ |.+| || +....++|.++.++.|.+.++|.|. -|.-. ++-...++.
T Consensus 152 ~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AY-QGF~~GleeDa~~lR~ 230 (396)
T COG1448 152 AETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAY-QGFADGLEEDAYALRL 230 (396)
T ss_pred cccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhh-hhhccchHHHHHHHHH
Confidence 455679999988888653 2345555 3677 88 3444678888999999999999884 22111 110000000
Q ss_pred ----C-ccEEEeCCCCcC--CCCCceE-EEEec
Q 018401 245 ----Y-ADVVTTTTHKSL--RGPRGAM-IFFRK 269 (356)
Q Consensus 245 ----~-~D~~~~s~~K~l--~gp~gG~-l~~~~ 269 (356)
+ --+++.|++|.| .|-+-|+ .++..
T Consensus 231 ~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~ 263 (396)
T COG1448 231 FAEVGPELLVASSFSKNFGLYGERVGALSVVAE 263 (396)
T ss_pred HHHhCCcEEEEehhhhhhhhhhhccceeEEEeC
Confidence 1 148899999976 3444444 44433
No 378
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.80 E-value=1.5e-07 Score=91.55 Aligned_cols=248 Identities=8% Similarity=0.019 Sum_probs=121.5
Q ss_pred CcHHHHH--HHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC-CCCCccccCCCchHHHHHHHHhhc----
Q 018401 58 TSVSVMQ--AVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGGSLSGSPSNFQVYTALL---- 130 (356)
Q Consensus 58 ~~~~V~~--a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g-~~~~~v~v~~sgs~a~~~~l~al~---- 130 (356)
-+|+|.+ ++.+.+..... ..+....+. . +...++.+.++++.+ -..+.+.|++||++++..+++...
T Consensus 62 ~~p~v~~~~ai~~ql~~l~~-~~~~~~~~~----~-~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~ 135 (443)
T PRK08297 62 NHPALADDPEFRAELGRAAL-NKPSNSDVY----T-VEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKS 135 (443)
T ss_pred CChHHhhHHHHHHHHHHhhh-hccccCCcC----C-HHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhh
Confidence 4789998 88887754110 001110111 1 122234466666652 223466779999999998887552
Q ss_pred ----CC------CCeeeecCCCCCcccCcccccc-----ccc-cccccee-e--EEEecccCCCC----C---CCCHHHH
Q 018401 131 ----KP------HDRIMALDLPHGGHLSHGYQTD-----TKK-ISAVSIF-F--ETMPYRLNEST----G---YIDYDQL 184 (356)
Q Consensus 131 ----~~------gd~Vl~~~~~~~~~~~~~~~~~-----~~~-~~~~g~~-~--~~v~~~~~~~~----~---~~d~~~l 184 (356)
.. ..+|+.....|++.-....... ... ....+.. + ..++++....+ . .-+++++
T Consensus 136 ~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (443)
T PRK08297 136 RKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQA 215 (443)
T ss_pred ccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHH
Confidence 01 2568777655443321111000 000 0000000 0 00010100000 0 0134566
Q ss_pred HHHhhh--cCCcEEEEcC--CCCCCc----ccHHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCC
Q 018401 185 EKSATL--FRPKLIVAGA--SAYARL----YDYERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTT 253 (356)
Q Consensus 185 ~~~i~~--~~~k~v~l~~--~n~g~~----~~l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~ 253 (356)
++.+.. .++.+|++.| .+.|.+ ..+++|.++|++||+++|+|++|+ +|..... ....+. ..|+++++
T Consensus 216 ~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g- 293 (443)
T PRK08297 216 RAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-RPDIVAFG- 293 (443)
T ss_pred HHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCC-CCCEEEec-
Confidence 666753 2567777763 334533 348899999999999999999985 3332110 001111 27999876
Q ss_pred CCcCCCCCceEEEEecCcchhccCCcchhhhHH-Hhhc-cccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhccc
Q 018401 254 HKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYE-EKIN-QAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFS 329 (356)
Q Consensus 254 ~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~-~~~~-~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~ 329 (356)
|.+ |.+|++..++ +. +.. ..+. ......++ +.|....++..++++.+.++.-.++.++..
T Consensus 294 -K~l--~~~a~l~~~~-i~-----------~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g 355 (443)
T PRK08297 294 -KKT--QVCGIMAGRR-VD-----------EVEDNVFAVSSRINSTW-GGNLVDMVRARRILEVIEEDGLVENAARQG 355 (443)
T ss_pred -ccc--cccceecchH-HH-----------HhhhhhccCccccCCCC-CccHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 986 3456554432 10 111 1111 00011122 235566777778899887654345555433
No 379
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=98.72 E-value=5e-07 Score=84.07 Aligned_cols=138 Identities=13% Similarity=0.162 Sum_probs=96.9
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHcCCC-CC--ccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccc
Q 018401 82 RYYGGNEYIDMAESLCQKRALEAFRLD-PE--KWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKI 158 (356)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~la~~~g~~-~~--~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~ 158 (356)
-+|+.+.+..++...+++.....+..+ .. .+++|+|.+.++..+++.++++||.|++..+++.+.+. .+
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~--------s~ 165 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ--------SM 165 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHH--------hc
Confidence 356777778888755555333233332 22 34558888888888999999999999999977776655 44
Q ss_pred cccceeeEEEecccCCCCCCCCHHHHHHHhhh--------cCCcEEEEc--CCC-CCCccc---HHHHHHHHHHcCCEEE
Q 018401 159 SAVSIFFETMPYRLNESTGYIDYDQLEKSATL--------FRPKLIVAG--ASA-YARLYD---YERIRKVCNKQKAIML 224 (356)
Q Consensus 159 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~--------~~~k~v~l~--~~n-~g~~~~---l~~I~~la~~~g~~vi 224 (356)
+..|+++ +|++.+ ...+++|.|++.+.. .++++++.- ..| ||.... -++|.+||++|++++|
T Consensus 166 ~a~gv~~--ipv~md--~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIV 241 (472)
T KOG0634|consen 166 EALGVKI--IPVKMD--QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIV 241 (472)
T ss_pred cccCceE--Eecccc--CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEE
Confidence 4556444 655665 346899999987742 236677664 445 785555 4589999999999999
Q ss_pred Eeccchh
Q 018401 225 ADMAHIS 231 (356)
Q Consensus 225 vD~a~~~ 231 (356)
.|+...+
T Consensus 242 eDdpYy~ 248 (472)
T KOG0634|consen 242 EDDPYYF 248 (472)
T ss_pred ecCccce
Confidence 9988654
No 380
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.72 E-value=6.6e-07 Score=82.77 Aligned_cols=247 Identities=14% Similarity=0.099 Sum_probs=135.9
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC-CCCccccCCCchHHHHHHHHhhcC----
Q 018401 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGGSLSGSPSNFQVYTALLK---- 131 (356)
Q Consensus 57 ~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~v~v~~sgs~a~~~~l~al~~---- 131 (356)
...|++.+++.+.+.. ..+. ..-++ ..+.+ .+.+.+.+..+- ..+.+.|++|||+|++.++....+
T Consensus 72 hanpev~ral~~q~~k-~~hs--~~~~~----t~eav--~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~ 142 (433)
T KOG1401|consen 72 HANPEVARALAEQAKK-LGHS--SNGYF----TLEAV--ELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGK 142 (433)
T ss_pred CCCHHHHHHHHHHHhh-heec--cCccc----cHHHH--HHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcc
Confidence 3479999999887765 2111 11111 11211 244566665544 456666799999999987765421
Q ss_pred --CCC--eeeecCCCCCcc-cCccccccccccccccee-----eEEEecccCCCCCCCCHHHHHHHhhhcC--CcEEEEc
Q 018401 132 --PHD--RIMALDLPHGGH-LSHGYQTDTKKISAVSIF-----FETMPYRLNESTGYIDYDQLEKSATLFR--PKLIVAG 199 (356)
Q Consensus 132 --~gd--~Vl~~~~~~~~~-~~~~~~~~~~~~~~~g~~-----~~~v~~~~~~~~~~~d~~~l~~~i~~~~--~k~v~l~ 199 (356)
+-+ .++.....|++. +.... ..+....+.. ...+.. ..-|..++++.+..++ ..+|++.
T Consensus 143 ~~~~~~t~~Iaf~nsyHG~tlgals---~~~~s~y~~~~~p~~p~v~~~------~ynd~t~l~k~~~~h~~~IaAVIvE 213 (433)
T KOG1401|consen 143 KHPEKKTKFIAFENSYHGRTLGALS---VTGNSKYGLPFDPIAPDVVTA------EYNDSTALEKLFESHKGEIAAVIVE 213 (433)
T ss_pred cCCccceeEEEEecCcCCcchhHHH---hhcccccCCCCCCCCCceeec------ccCCHHHHHHHHHhCCCceEEEEEe
Confidence 222 377665444332 21111 0011111110 111111 1237899999998744 4677776
Q ss_pred CCC-C-C----CcccHHHHHHHHHHcCCEEEEeccchh-hhccc----CCCCCCCCCccEEEeCCCCcCCCCCc-eEEEE
Q 018401 200 ASA-Y-A----RLYDYERIRKVCNKQKAIMLADMAHIS-GLVAA----GVIPSPFEYADVVTTTTHKSLRGPRG-AMIFF 267 (356)
Q Consensus 200 ~~n-~-g----~~~~l~~I~~la~~~g~~vivD~a~~~-g~~~~----~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~ 267 (356)
|-. . | ....+..|..+|+++|+++|.|+++.- |-... ..... ..|+++.. |.|+|.-. |+..+
T Consensus 214 PiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~---~PDI~t~a--K~L~gGlPigA~~v 288 (433)
T KOG1401|consen 214 PIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGV---TPDITTVA--KPLGGGLPIGATGV 288 (433)
T ss_pred cccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCc---CCcceeeh--hhccCCceeEEEee
Confidence 443 2 3 233477899999999999999999852 21110 01111 26999888 98865433 88888
Q ss_pred ecCcchhccCCcchhhhHHHhhccccC--CCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHHhhh
Q 018401 268 RKGVKEINKQGKEVFYDYEEKINQAVF--PGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQ 340 (356)
Q Consensus 268 ~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (356)
++ +..+.+..... .+..-.-|.....+...+++.+.+..-.+++......++..+.+.+
T Consensus 289 ~~--------------kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~ 349 (433)
T KOG1401|consen 289 RD--------------KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYL 349 (433)
T ss_pred hH--------------HHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 87 45555543321 1111222445666677889988876544555555555554444333
No 381
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.61 E-value=1.1e-06 Score=81.26 Aligned_cols=210 Identities=18% Similarity=0.085 Sum_probs=107.0
Q ss_pred HHcCCeeecCCCCCcHHHHHHHHhhhhc---c-CCCCCCCCccC-CCchhHHHHHHHHHHHHHHHcCCCCCccccCCCch
Q 018401 45 QWKGLELIPSENFTSVSVMQAVGSVMTN---K-YSEGYPGARYY-GGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGS 119 (356)
Q Consensus 45 ~~~~i~L~~~~~~~~~~V~~a~~~~l~~---~-~~~~~~~~~~~-~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs 119 (356)
+...++|+-+-.-++++-++--...+.- . +.....+.|.| ++..+..+++ +.+++++|++++++++.+++|
T Consensus 21 ka~~L~LdmtRGKPs~eQLdLS~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe~r----~l~a~llgv~~~~viv~gNSS 96 (425)
T PF12897_consen 21 KAKGLKLDMTRGKPSPEQLDLSNPLLDLPGSSDYLADGTDCRNYPGGLDGIPEAR----ELFAELLGVPPENVIVGGNSS 96 (425)
T ss_dssp HHTT--EES---S--HHHHHGGGGGGGSSTTCCBECTTEBTTSS-S-SS--HHHH----HHHHHHHTS-GGGEEE-SS-H
T ss_pred HHcCCCcccCCCCCCHHHHhhhHHHhcCCCCccccCCCccccCCCCccCChHHHH----HHHHHHhCCCHHHEEEeccch
Confidence 3468888877777777766643333321 1 11112234667 7777777655 899999999999988865555
Q ss_pred -HHHHHHH-Hhhc----C--------CCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHH
Q 018401 120 -PSNFQVY-TALL----K--------PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLE 185 (356)
Q Consensus 120 -~a~~~~l-~al~----~--------~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~ 185 (356)
..+.-++ .+++ . +.-+.|++.|.|.-|+. .++..|.+...| +.+ + ..+|+|.++
T Consensus 97 L~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa--------i~E~~Giemi~V--pM~-~-dGPDmD~Ve 164 (425)
T PF12897_consen 97 LNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA--------ITEHFGIEMIPV--PMT-E-DGPDMDMVE 164 (425)
T ss_dssp HHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH--------HHHHCT-EEEEE--EEE-T-TEE-HHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH--------HHHhhCcEEEec--CCC-C-CCCCHHHHH
Confidence 3333222 2221 1 12356788844443332 445567666555 554 2 357999999
Q ss_pred HHhh-hcCCcEEEEc--CCC-CCCcccHHHHHHHH----HHcCCEEEEeccchhhhcccCCCCCC-C---------CCcc
Q 018401 186 KSAT-LFRPKLIVAG--ASA-YARLYDYERIRKVC----NKQKAIMLADMAHISGLVAAGVIPSP-F---------EYAD 247 (356)
Q Consensus 186 ~~i~-~~~~k~v~l~--~~n-~g~~~~l~~I~~la----~~~g~~vivD~a~~~g~~~~~~~~~~-l---------~~~D 247 (356)
+++. +..+|.|++. .+| +|..+.-+.+.+++ ...+..+++|.|.++.+...+..... + +..|
T Consensus 165 ~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpd 244 (425)
T PF12897_consen 165 ELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPD 244 (425)
T ss_dssp HHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TT
T ss_pred HHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCC
Confidence 9985 3467999887 788 89888777777766 35689999999988877632211111 0 0122
Q ss_pred --EEEeCCCCcCCCCCc-eEEEEecC
Q 018401 248 --VVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 248 --~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
+++.|++|--....| +++..++.
T Consensus 245 rv~~F~STSKITf~GaGva~~aaS~~ 270 (425)
T PF12897_consen 245 RVYVFASTSKITFPGAGVAFFAASEA 270 (425)
T ss_dssp SEEEEEESTTTS-TTSS-EEEEE-HH
T ss_pred eEEEEecccccccCCcceeeeecCHH
Confidence 788899993333344 77777763
No 382
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.54 E-value=1.1e-06 Score=85.36 Aligned_cols=166 Identities=17% Similarity=0.154 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccc-CCCchHHH---HHHHHhhc-CCCC----eeeecCCCCCcccCccccccccccccc
Q 018401 91 DMAESLCQKRALEAFRLDPEKWGG-SLSGSPSN---FQVYTALL-KPHD----RIMALDLPHGGHLSHGYQTDTKKISAV 161 (356)
Q Consensus 91 ~~l~~~~~~~la~~~g~~~~~v~v-~~sgs~a~---~~~l~al~-~~gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 161 (356)
.++-..+.+++.+..|.+. +.+ ++||.++- ..++++.+ ..|+ .-+++...|+.+.. .+.++
T Consensus 581 ~~lf~~Le~~Lc~iTG~D~--~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA--------SA~Ma 650 (1001)
T KOG2040|consen 581 QQLFTELEKDLCEITGFDS--FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA--------SAAMA 650 (1001)
T ss_pred HHHHHHHHHHhheeecccc--eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh--------hHHhc
Confidence 3444456678888877763 467 77877432 23667763 3443 35667777877643 34567
Q ss_pred ceeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCCCC-CcccHHHHHHHHHHcCCEEEEeccchhhhcccC
Q 018401 162 SIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASAYA-RLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 237 (356)
Q Consensus 162 g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k~v~l~-~~n~g-~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~ 237 (356)
|.++++| ..+ .++.+|+.+|+++..++ +-.++.++ ||..| ....+++++++.++||.-|..|+|.--. ..+
T Consensus 651 gmkvvpV--~~~-~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNA--qVG 725 (1001)
T KOG2040|consen 651 GMKVVPV--GCD-ANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNA--QVG 725 (1001)
T ss_pred CCEEEEe--ecc-CCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccc--eec
Confidence 8666544 666 66899999999887653 35677888 66678 4456999999999999999999985321 122
Q ss_pred CCCCCCCCccEEEeCCCCcCCCC-----Cc-eEEEEecCc
Q 018401 238 VIPSPFEYADVVTTTTHKSLRGP-----RG-AMIFFRKGV 271 (356)
Q Consensus 238 ~~~~~l~~~D~~~~s~~K~l~gp-----~g-G~l~~~~~~ 271 (356)
+..-+.-|+|+.-...||+|+-| +| |-|.+++-+
T Consensus 726 lc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HL 765 (1001)
T KOG2040|consen 726 LCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL 765 (1001)
T ss_pred ccCCccccccceeecccceeeecCCCCCCCCCccchhhhc
Confidence 32222226999999999998433 33 667776644
No 383
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.48 E-value=1.5e-06 Score=89.73 Aligned_cols=154 Identities=18% Similarity=0.120 Sum_probs=96.9
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cC--CCCeeeecCCCCCcccCcccccccccccccceeeEEEeccc
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 172 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 172 (356)
+.+..++++.|.+-.+-.+...+|++-.+++++. .. ...+|+++...|+.+..... .-++..|.++ +
T Consensus 128 e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~----t~~~~~g~~i--~---- 197 (954)
T PRK12566 128 NFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLR----TRAEGFGFEL--V---- 197 (954)
T ss_pred HHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHH----HhhhcCCcEE--E----
Confidence 5778999999998665456666665555444443 22 25689898877754432111 1122233222 2
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC-CccEEE
Q 018401 173 NESTGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 250 (356)
Q Consensus 173 ~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~-~~D~~~ 250 (356)
.+++++.+.+ ++..|++..+| .|.+.|+++|.+++|+.|++++ +++- .+.+.+...|.+ |+|+++
T Consensus 198 --------~~~~~~~~~~-~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~-~~~d---~laL~ll~~Pge~GADI~v 264 (954)
T PRK12566 198 --------VDAVDNLAAH-AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALAC-VAAD---LLSLLVLTPPGELGADVVL 264 (954)
T ss_pred --------EcchhhcCCC-CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEE-EEeC---HHHHhCCCChhhcCCcEEe
Confidence 1334444544 67788887545 8999999999999999999865 4432 223333333433 699998
Q ss_pred eCCCC-----cCCCCCceEEEEecCcc
Q 018401 251 TTTHK-----SLRGPRGAMIFFRKGVK 272 (356)
Q Consensus 251 ~s~~K-----~l~gp~gG~l~~~~~~~ 272 (356)
++++- +++||..|++.+++++.
T Consensus 265 G~~Q~fGvp~~~GGP~ag~~a~~~~~~ 291 (954)
T PRK12566 265 GSTQRFGVPMGYGGPHAAYFACRDDYK 291 (954)
T ss_pred eCCCcCCCCCCCCCCCeeeeeehHHHH
Confidence 87654 45677779999998753
No 384
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.45 E-value=2.9e-06 Score=75.53 Aligned_cols=265 Identities=15% Similarity=0.134 Sum_probs=132.1
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh--cCCCC
Q 018401 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL--LKPHD 134 (356)
Q Consensus 57 ~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al--~~~gd 134 (356)
-.+|+|.++....+.. .+...|+. .+++.+-++...+.+-+.+. ..|++||+++|.++++.. .....
T Consensus 61 hchp~VV~A~~kQmat----~~tN~RFl-----hd~lv~cA~~l~stlPeLsv--c~F~NSGSEANDLALRLAR~ftkhq 129 (452)
T KOG1403|consen 61 HCHPEVVRAGAKQMAT----ISTNNRFL-----HDELVQCARTLTSTLPELSV--CFFVNSGSEANDLALRLARNFTKHQ 129 (452)
T ss_pred cCCHHHHHHHHHHHhH----hcccchhh-----HHHHHHHHHHHhhcCCCceE--EEEecCCchhhHHHHHHHHhhcccC
Confidence 3578898888776654 12222222 34555444444444444332 245999999999888754 34445
Q ss_pred eeeecCCCCCcccCccccc--cc--ccccccc-eeeEEEecccC------------CCCCCCCHHHHHHHhhhc--CCcE
Q 018401 135 RIMALDLPHGGHLSHGYQT--DT--KKISAVS-IFFETMPYRLN------------ESTGYIDYDQLEKSATLF--RPKL 195 (356)
Q Consensus 135 ~Vl~~~~~~~~~~~~~~~~--~~--~~~~~~g-~~~~~v~~~~~------------~~~~~~d~~~l~~~i~~~--~~k~ 195 (356)
.|++.+..|.+++...... |+ .+-.... -.+.+.|+|-. .+.+..=.+.+++.+.+. +-..
T Consensus 130 DvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~g 209 (452)
T KOG1403|consen 130 DVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQG 209 (452)
T ss_pred ceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCc
Confidence 5666666666665422211 11 1100010 01122222210 000111123444444331 1111
Q ss_pred E--EE--c-CCCCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccCCCCCCCC----CccEEEeCCCCcCC-CC
Q 018401 196 I--VA--G-ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPSPFE----YADVVTTTTHKSLR-GP 260 (356)
Q Consensus 196 v--~l--~-~~n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~~~~~~l~----~~D~~~~s~~K~l~-gp 260 (356)
| ++ + .|..|.+.| ++++++.++.+|.+.|.|+.|. +|-+. ..-|.++ -.|+++.+ |-++ |.
T Consensus 210 vAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG--~hyWafq~y~fiPDIVtmg--KpmGNGh 285 (452)
T KOG1403|consen 210 VAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVG--SHYWAFQTYNFIPDIVTMG--KPMGNGH 285 (452)
T ss_pred HHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccc--hhhhhhhhhccccchheec--ccCCCCC
Confidence 1 22 2 344566555 6788999999999999999983 33222 2212221 25888876 8775 33
Q ss_pred CceEEEEecCcchhccCCcchhhhHHHhhcc---ccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHHH
Q 018401 261 RGAMIFFRKGVKEINKQGKEVFYDYEEKINQ---AVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFV 337 (356)
Q Consensus 261 ~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~~ 337 (356)
+-+++.+.++ +.+.+.. .++ ..+|.-++...+++ +.++.++++.--++...-.-.+-..+.
T Consensus 286 PVa~Vattke--------------IA~Af~atgv~YF-NTyGGnPVsCAv~l-aVm~v~e~E~Lq~ha~~vG~~L~~lL~ 349 (452)
T KOG1403|consen 286 PVAAVATTKE--------------IAQAFHATGVEYF-NTYGGNPVSCAVGL-AVMRVCEDENLQEHAQQVGEKLEVLLR 349 (452)
T ss_pred eeeEEeccHH--------------HHHHhccccceeh-hccCCCchhHHHHH-HHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 3378887773 4444332 112 12344444444444 456666654322222221111222233
Q ss_pred hhhccccccccccCC
Q 018401 338 SNQNNSENIEEDKGR 352 (356)
Q Consensus 338 ~~~~~~~~~~~~~~~ 352 (356)
..+.+.+.|||.+|.
T Consensus 350 ~~k~kh~~IGDvRGv 364 (452)
T KOG1403|consen 350 RLKQKHECIGDVRGV 364 (452)
T ss_pred HHhhhccceeccccc
Confidence 446677888888763
No 385
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.39 E-value=1.3e-06 Score=81.83 Aligned_cols=171 Identities=16% Similarity=0.105 Sum_probs=110.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCc---------cccCCCchHHHHHHHHhh-------cCCCC------------eeeec
Q 018401 88 EYIDMAESLCQKRALEAFRLDPEK---------WGGSLSGSPSNFQVYTAL-------LKPHD------------RIMAL 139 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~---------v~v~~sgs~a~~~~l~al-------~~~gd------------~Vl~~ 139 (356)
+...+||..+.+|++++++.+..- -++.+++++++..++.+. ++.+. .+..+
T Consensus 109 Pa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~S 188 (511)
T KOG0628|consen 109 PACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCS 188 (511)
T ss_pred cchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEec
Confidence 446788888999999999975321 112344555555444332 12221 23344
Q ss_pred CCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCc-----EEEEc--CCCCCCcccHHHH
Q 018401 140 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK-----LIVAG--ASAYARLYDYERI 212 (356)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k-----~v~l~--~~n~g~~~~l~~I 212 (356)
+..|.++-. ++.+.+.+.+.+ +.+ +++.++-+.|++++.+...+ +++.+ .+++-...++++|
T Consensus 189 Dqahssvek--------a~~i~~VklR~l--~td-~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~el 257 (511)
T KOG0628|consen 189 DQAHSSVEK--------ACLIAGVKLRAL--PTD-ENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEEL 257 (511)
T ss_pred CcccchHHH--------hHhhcceeEEEe--ecc-cCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHh
Confidence 556665544 444667777666 455 47889999999999763322 22333 2223366689999
Q ss_pred HHHHHHcCCEEEEeccchhhhccc----CCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 213 RKVCNKQKAIMLADMAHISGLVAA----GVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 213 ~~la~~~g~~vivD~a~~~g~~~~----~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
..+|+++|+|+++|+|.+ |...+ +-.-.|++.+|.+.+.+|||+..--. ..|+++++
T Consensus 258 g~Vc~~~glWLHVDAAYA-Gsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~ 319 (511)
T KOG0628|consen 258 GPVCREEGLWLHVDAAYA-GSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDG 319 (511)
T ss_pred cchhhhcCEEEEeehhhc-cccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecC
Confidence 999999999999999974 43322 12224556799999999999876555 77888886
No 386
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.36 E-value=3.6e-07 Score=85.14 Aligned_cols=172 Identities=17% Similarity=0.060 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCc-cccCCCch-HHHHHHHHhhc--CCCCeeeecCCCCCcccCcccccccccccccceee
Q 018401 90 IDMAESLCQKRALEAFRLDPEK-WGGSLSGS-PSNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 165 (356)
Q Consensus 90 ~~~l~~~~~~~la~~~g~~~~~-v~v~~sgs-~a~~~~l~al~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 165 (356)
...|...+...+-+..|+.... .+++.-+| ..+.+.+.++- ..++.|+.+..+|.+.+- .+..+|.++
T Consensus 54 ~~~ltn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~k--------ai~~AGl~~ 125 (389)
T PF05889_consen 54 LAKLTNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFK--------AIERAGLEP 125 (389)
T ss_dssp HHHHHHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHH--------HHHHTT-EE
T ss_pred HHHHHHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHH--------HHHhcCCeE
Confidence 3445555555556678885332 23344444 33333455552 567899998887775543 566778888
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCC-CCCccc-HHHHHHHHHHcCCEEEEeccchhhhccc--CC
Q 018401 166 ETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARLYD-YERIRKVCNKQKAIMLADMAHISGLVAA--GV 238 (356)
Q Consensus 166 ~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k~v~l~-~~n-~g~~~~-l~~I~~la~~~g~~vivD~a~~~g~~~~--~~ 238 (356)
+.|+.....+.-..|++.+++.+.+. ...+.+++ .+. .|...| +++|+++|++||++.++-.|.+.=.... .+
T Consensus 126 ~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i 205 (389)
T PF05889_consen 126 VVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLI 205 (389)
T ss_dssp EEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHH
T ss_pred EEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHH
Confidence 77864444233356888888888652 23455666 444 687777 9999999999999999999976500000 00
Q ss_pred -CCCCCCCccEEEeCCCCcCCCCCceEEEEec
Q 018401 239 -IPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 269 (356)
Q Consensus 239 -~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~ 269 (356)
.....+-+|+++.|+.|.|..|-||.++...
T Consensus 206 ~~a~~~GRvda~vqS~dkNF~VPvGgai~As~ 237 (389)
T PF05889_consen 206 QQAWRVGRVDAFVQSTDKNFMVPVGGAIMASF 237 (389)
T ss_dssp HHHHHHSTCSEEEEEHHHHHCEESSHEEEEES
T ss_pred HHHHhcCCcceeeeecCCCEEecCCCcEEEec
Confidence 0000012788899999999988884444433
No 387
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.31 E-value=1.4e-05 Score=72.95 Aligned_cols=232 Identities=17% Similarity=0.161 Sum_probs=129.7
Q ss_pred cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCC
Q 018401 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKP 132 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~ 132 (356)
++.+.++..-..+|..- -+.|.++ .....|. +.+++.||.+.. +-+.-|-+|-..++..++++
T Consensus 55 SGTgams~~qwaamm~G-----DEAYags------rs~~~L~----~avkdifGfq~~--iPthQGRgAE~Il~~i~ik~ 117 (471)
T COG3033 55 SGTGAMTDKQWAAMMRG-----DEAYAGS------RSYYALA----DAVKDIFGFQYT--IPTHQGRGAENILIPILIKK 117 (471)
T ss_pred CCcccccHHHHHHHhcc-----chhhccc------ccHHHHH----HHHHHhcCceee--eeccCCccHHHHHHHHHhhh
Confidence 55556666666666431 1123333 3333444 677788887543 22666666555455666666
Q ss_pred CCeee-----ecCCCCCcccCcccccccccccccceeeEEEeccc------C-CCCCCCCHHHHHHHhhhc---CCcEEE
Q 018401 133 HDRIM-----ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL------N-ESTGYIDYDQLEKSATLF---RPKLIV 197 (356)
Q Consensus 133 gd~Vl-----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~------~-~~~~~~d~~~l~~~i~~~---~~k~v~ 197 (356)
|+.+. +++..|-. .-+..+...|+.++.++.+- + +-.+.+|++.|++.+++. ++-.|+
T Consensus 118 ~~~~pg~~~~~~sN~~Fd-------TTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~ 190 (471)
T COG3033 118 GEQEPGSKMVAFSNYHFD-------TTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIV 190 (471)
T ss_pred ccccCCccccccccceec-------chhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEE
Confidence 65543 23222111 11112333444444343221 1 012578999999999753 355666
Q ss_pred Ec-CCC--CC---CcccHHHHHHHHHHcCCEEEEeccchhhhcc-cC-----CCCCC--------CCCccEEEeCCCCcC
Q 018401 198 AG-ASA--YA---RLYDYERIRKVCNKQKAIMLADMAHISGLVA-AG-----VIPSP--------FEYADVVTTTTHKSL 257 (356)
Q Consensus 198 l~-~~n--~g---~~~~l~~I~~la~~~g~~vivD~a~~~g~~~-~~-----~~~~~--------l~~~D~~~~s~~K~l 257 (356)
++ .+| -| ...+++++.+||++|++.++.|++..+--.. +. ...+. +..+|-++.|+-|--
T Consensus 191 ~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~ 270 (471)
T COG3033 191 LTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDG 270 (471)
T ss_pred EEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccc
Confidence 66 445 24 3446789999999999999999987543221 11 11222 125899999999976
Q ss_pred CCCCceEEEEecCcchhccCCcchhhhHHHhhccc--cCCC--CCCCCcHHHHHHHHHHHHHHhc
Q 018401 258 RGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQA--VFPG--LQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 258 ~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~--~~gt~~~~~~~al~~Al~~~~~ 318 (356)
..+-||++.++++- .+++....+.. ...+ .+|...--.+.+++..|.+-.+
T Consensus 271 lvnmGGfl~~~D~~----------~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~ 325 (471)
T COG3033 271 LVNMGGFLCFKDDS----------FFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVN 325 (471)
T ss_pred eeccccEEEecCcc----------HHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcC
Confidence 67888999999851 00222221110 0111 1255555567788888877665
No 388
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=98.25 E-value=7.3e-06 Score=72.42 Aligned_cols=258 Identities=13% Similarity=0.044 Sum_probs=143.1
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC-cccc-CCCchHHHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE-KWGG-SLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~-~v~v-~~sgs~a~~~ 124 (356)
..+|+.+++..+|.+|+..+++.+-+.-..|-.-..+.........+-+.....+.++++++.. +|+| .+|||+-..+
T Consensus 7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFaA 86 (370)
T KOG2790|consen 7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFAA 86 (370)
T ss_pred ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccccc
Confidence 5789999999999999999998877632222221111111122334445666888999999554 6777 7788754443
Q ss_pred HHHhh--cCCC---CeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCC--CCCCHHHHHHHhhhcCCcEEE
Q 018401 125 VYTAL--LKPH---DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST--GYIDYDQLEKSATLFRPKLIV 197 (356)
Q Consensus 125 ~l~al--~~~g---d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~d~~~l~~~i~~~~~k~v~ 197 (356)
+...+ ++.| |-|++-. |..-....+.-.|....++ .+..... ..+|.+.++ +++ +.+.|.
T Consensus 87 v~lNL~glK~g~~AdYiVTGs---------WS~KA~~EAkk~~~~~~V~-~~~k~y~ygkvPd~~~w~--~~~-da~yvy 153 (370)
T KOG2790|consen 87 VPLNLIGLKHGRCADYVVTGS---------WSAKAAEEAKKYGTPNIVI-PKLKSYTYGKVPDPSTWE--LNP-DASYVY 153 (370)
T ss_pred cchhhhccccCCccceEEecc---------ccHHHHHHHHhhCCceEEe-ccccccccCcCCChhhcc--cCC-CccEEE
Confidence 44444 3555 4455433 2111111111122111112 1222111 134444432 222 456777
Q ss_pred EcCCCC--CCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh
Q 018401 198 AGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 274 (356)
Q Consensus 198 l~~~n~--g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 274 (356)
.|.+.| |..++.-- +-.-+|++++.|.+.-+-.-|+|+... +++..+.+|.+ ||.| -++++|+++...
T Consensus 154 yCaNETVHGVEf~~~P---~~~~~~~vlVaDmSSnflSrpvDvsk~-----gvi~aGAQKN~-G~aG~Tvvivr~dllg~ 224 (370)
T KOG2790|consen 154 YCANETVHGVEFDFIP---VNDPKGAVLVADMSSNFLSRPVDVSKF-----GVIFAGAQKNV-GPAGVTVVIVRKDLLGN 224 (370)
T ss_pred EecCceeeceecCCCC---CCCCCCceEEEecccchhcCCccchhc-----ceEEecccccc-CccccEEEEEehhhhcc
Confidence 774443 53332111 122358899999987666667777664 48899999986 7888 788888864211
Q ss_pred ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhccc
Q 018401 275 NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFS 329 (356)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~ 329 (356)
...-.+.. .++.........+.||+..++..+...++++.+..+...+.+.+
T Consensus 225 ~~~~tP~v---~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n 276 (370)
T KOG2790|consen 225 ALDITPSV---LDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLN 276 (370)
T ss_pred cccCCccc---cceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHH
Confidence 11112211 11111111122358999999999999999999877665554433
No 389
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.04 E-value=9.7e-06 Score=66.96 Aligned_cols=60 Identities=12% Similarity=-0.012 Sum_probs=50.7
Q ss_pred CCchhHHHHHHHHHHHHHHHcC----CCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCC
Q 018401 85 GGNEYIDMAESLCQKRALEAFR----LDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHG 144 (356)
Q Consensus 85 ~~~~~~~~l~~~~~~~la~~~g----~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~ 144 (356)
+...+..++++++++++.+.+| +++++|++++|+++++..++.++++|||.|+++.|.|+
T Consensus 89 ~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 89 QDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred CCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 3345678899999999999988 36788888999999999899999999999999996553
No 390
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.39 E-value=0.0017 Score=63.89 Aligned_cols=154 Identities=12% Similarity=0.134 Sum_probs=94.0
Q ss_pred HHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 97 CQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 97 ~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.+..++++.|.+-.+-.+..-||++..++..+. ..++.+.++....|+..++.... ...-.|++++.
T Consensus 168 yQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~T----Ra~~~~i~v~~-------- 235 (1001)
T KOG2040|consen 168 YQTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKT----RAKGFGIKVVV-------- 235 (1001)
T ss_pred hHHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhc----cccccceeEEe--------
Confidence 557788888887666566666776655444433 56777788888888777653321 11222322211
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC-CccEEEeCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVTTTT 253 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~-~~D~~~~s~ 253 (356)
.|+.+... ..+ .+..+++..+. .|.+.|.+++++.+++.|..+++- .....+.+...|.+ |+|++++|+
T Consensus 236 ---~~~~~~~~-s~~-~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~a----tDLLaLtiLrpPgefGaDIavGSs 306 (1001)
T KOG2040|consen 236 ---SDIKEADY-SSK-DVSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMA----TDLLALTILRPPGEFGADIAVGSS 306 (1001)
T ss_pred ---cCHHHhhc-ccc-ceeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEe----ehhhHHHccCChhhcCceeeeccc
Confidence 13333222 122 56777888555 799999999999999999876652 22233333333333 699999999
Q ss_pred CCc-----CCCCCceEEEEecCc
Q 018401 254 HKS-----LRGPRGAMIFFRKGV 271 (356)
Q Consensus 254 ~K~-----l~gp~gG~l~~~~~~ 271 (356)
+.. .+||..||+.+++++
T Consensus 307 QRFGVPlGYGGPHAaFfAv~~~l 329 (1001)
T KOG2040|consen 307 QRFGVPLGYGGPHAAFFAVSESL 329 (1001)
T ss_pred cccCccccCCCchHHHHHHHHHH
Confidence 982 134444677666643
No 391
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=96.94 E-value=0.0021 Score=59.00 Aligned_cols=76 Identities=17% Similarity=0.210 Sum_probs=50.1
Q ss_pred CHHHHHHHhhhcC-----CcEEEEcC--CCCC----CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCC---CCCCC-
Q 018401 180 DYDQLEKSATLFR-----PKLIVAGA--SAYA----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI---PSPFE- 244 (356)
Q Consensus 180 d~~~l~~~i~~~~-----~k~v~l~~--~n~g----~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~---~~~l~- 244 (356)
.+++++++|.+.+ +.++++.| +.-| ....+.+|.+++++||+.+|+|++|..|..-..+. .+.++
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 4677777776532 34555542 2233 55568999999999999999999997554433321 23333
Q ss_pred CccEEEeCCCCcC
Q 018401 245 YADVVTTTTHKSL 257 (356)
Q Consensus 245 ~~D~~~~s~~K~l 257 (356)
-+|+++|| |-|
T Consensus 334 PpD~vTFS--KK~ 344 (484)
T KOG1405|consen 334 PPDVVTFS--KKF 344 (484)
T ss_pred Cccceehh--hhh
Confidence 38999998 645
No 392
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=95.59 E-value=0.023 Score=50.25 Aligned_cols=169 Identities=15% Similarity=0.154 Sum_probs=91.5
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCC-Cc-ccc-CCCchHHHHHHHHhh--cCCCC-eeeecCCCCCcccCccccccccccc
Q 018401 86 GNEYIDMAESLCQKRALEAFRLDP-EK-WGG-SLSGSPSNFQVYTAL--LKPHD-RIMALDLPHGGHLSHGYQTDTKKIS 159 (356)
Q Consensus 86 ~~~~~~~l~~~~~~~la~~~g~~~-~~-v~v-~~sgs~a~~~~l~al--~~~gd-~Vl~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
|+.....+..+.....-.+.|+-. .+ +++ ...|.+... .+..+ -+|.. -|+.+..+..+.+...+
T Consensus 51 gssll~~isne~a~~~i~l~glhav~nc~vvpl~tgmslsl-c~~s~r~krpkakyiiw~ridqks~~ksi~-------- 121 (432)
T KOG3843|consen 51 GSSLLACISNEFAKDAIHLAGLHAVANCFVVPLATGMSLSL-CFLSLRHKRPKAKYIIWLRIDQKSCFKSII-------- 121 (432)
T ss_pred chHHHHHHHHHHHHHHHHHhhhhhhhceeEEeccccccHHH-HHHHHhhcCCcccEEEEEecchHHHHHHHH--------
Confidence 333444555555555666777621 22 233 344443333 44444 23433 35545544443332111
Q ss_pred ccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc---CCCC-C-CcccHHHHHHHHHHcCCEEEEeccchhh--
Q 018401 160 AVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG---ASAY-A-RLYDYERIRKVCNKQKAIMLADMAHISG-- 232 (356)
Q Consensus 160 ~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~---~~n~-g-~~~~l~~I~~la~~~g~~vivD~a~~~g-- 232 (356)
-+|-....+.--.+.+.-.-|++.+++.+.+.....|++. .+.. + ....+++|+.+|..|+++-++..|.+.-
T Consensus 122 ~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqse 201 (432)
T KOG3843|consen 122 HAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSE 201 (432)
T ss_pred hcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchH
Confidence 2232232232112222235688999988877455544442 2222 3 4445999999999999999998774321
Q ss_pred -h---cccCCCCCCCCCccEEEeCCCCcCCCCCceEEE
Q 018401 233 -L---VAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 266 (356)
Q Consensus 233 -~---~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~ 266 (356)
. +.... ..+.+|.++.|..|.|..|-||+++
T Consensus 202 e~i~~iaa~~---~~grida~vqsldknf~vpvggaii 236 (432)
T KOG3843|consen 202 ECIHKIAAAA---ECGRIDAFVQSLDKNFMVPVGGAII 236 (432)
T ss_pred HHHHHHHHHh---hhccHHHHHHHhhhcceeecchhHh
Confidence 1 11111 1123899999999999999997665
No 393
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=94.67 E-value=0.41 Score=44.23 Aligned_cols=192 Identities=16% Similarity=0.164 Sum_probs=107.1
Q ss_pred cCCeeecC-------CCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC-----CCCccc-
Q 018401 47 KGLELIPS-------ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-----DPEKWG- 113 (356)
Q Consensus 47 ~~i~L~~~-------~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-----~~~~v~- 113 (356)
..|||..+ -+++-|.|++|-.+.+.... ...| .+-.+..++.+...+. .||. ....++
T Consensus 53 ~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~l-----dKEY-lpI~Gl~eF~k~sakL---a~G~~s~~ik~~Ri~t 123 (427)
T KOG1411|consen 53 KKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSL-----DKEY-LPITGLAEFNKLSAKL---ALGDNSPVIKEKRIVT 123 (427)
T ss_pred ceeeecccceecCCCCeeeeHHHHHHHHHHhhhcc-----cchh-ccccchHHHHHHHHHH---hhcCCchhhhccceeE
Confidence 46777643 22456788888776554211 1111 2223445555333222 2444 222333
Q ss_pred c-CCCchHHHH--HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh
Q 018401 114 G-SLSGSPSNF--QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 190 (356)
Q Consensus 114 v-~~sgs~a~~--~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~ 190 (356)
+ +-|||+++. +.+.+..-++..|.+++|+.+.+.. ....+|..+....+ .++....+|++.+.+.+.+
T Consensus 124 vQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~--------if~~ag~~~~~yrY-yd~~t~gld~~g~ledl~~ 194 (427)
T KOG1411|consen 124 VQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKN--------IFKDAGLPVKFYRY-YDPKTRGLDFKGMLEDLGE 194 (427)
T ss_pred EEeccCcchhhHHHHHHHhhccccceeecCCcccccCc--------cccccCcceeeeee-ccccccccchHHHHHHHhc
Confidence 2 667776655 2344556679999999988776643 22345544444432 2335567888887776664
Q ss_pred cCC-cEEEE--cCCC-CC---CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCC--C-----CCcc-EEEeCCCC
Q 018401 191 FRP-KLIVA--GASA-YA---RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP--F-----EYAD-VVTTTTHK 255 (356)
Q Consensus 191 ~~~-k~v~l--~~~n-~g---~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~--l-----~~~D-~~~~s~~K 255 (356)
... ..|++ |.+| || +....++|.++.++.+.+-+.|.|. -|....++...- + +|.+ +++.|.-|
T Consensus 195 ~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAY-QGfaSG~~d~DA~avR~F~~~g~~~~laQSyAK 273 (427)
T KOG1411|consen 195 APEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAY-QGFASGDLDKDAQAVRLFVEDGHEILLAQSYAK 273 (427)
T ss_pred CCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhh-cccccCCchhhHHHHHHHHHcCCceEeehhhhh
Confidence 222 33444 3666 76 5555788999999999999999884 222222221110 0 0122 68888899
Q ss_pred cC
Q 018401 256 SL 257 (356)
Q Consensus 256 ~l 257 (356)
.+
T Consensus 274 NM 275 (427)
T KOG1411|consen 274 NM 275 (427)
T ss_pred hc
Confidence 75
No 394
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=93.57 E-value=0.33 Score=44.20 Aligned_cols=142 Identities=14% Similarity=0.116 Sum_probs=81.5
Q ss_pred CCCchHHHHHHH--HhhcCCCCeeeecCCCCCcccCcccccccccccccc-eeeEEEecccCCCCCCCCHHHHHHHhhhc
Q 018401 115 SLSGSPSNFQVY--TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS-IFFETMPYRLNESTGYIDYDQLEKSATLF 191 (356)
Q Consensus 115 ~~sgs~a~~~~l--~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~d~~~l~~~i~~~ 191 (356)
+-|||+|+.... .+-+-+...|.++.|+...|...+. -+| ..+...++ .+.++..+|++.+...+...
T Consensus 105 slsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~--------~aGf~tv~~Y~y-Wd~~~k~~d~e~~Lsdl~~A 175 (410)
T KOG1412|consen 105 SLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFE--------KAGFTTVATYPY-WDAENKCVDLEGFLSDLESA 175 (410)
T ss_pred eccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHH--------HcCCceeeeeee-ecCCCceecHHHHHHHHhhC
Confidence 668887777432 2223456678888877665543221 223 12333332 23345578999998888752
Q ss_pred CCcE-EEE--cCCC-CC---CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCC-------CCc-cEEEeCCCCc
Q 018401 192 RPKL-IVA--GASA-YA---RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-------EYA-DVVTTTTHKS 256 (356)
Q Consensus 192 ~~k~-v~l--~~~n-~g---~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l-------~~~-D~~~~s~~K~ 256 (356)
..+. +++ |.+| || +..-...|++..++.+...+.|.|. -|....|+..... .+. -+++.|+.|.
T Consensus 176 Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAY-QGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKN 254 (410)
T KOG1412|consen 176 PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAY-QGFASGDLDADAWAIRYFVEQGFELFVCQSFAKN 254 (410)
T ss_pred CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhh-cccccCCccccHHHHHHHHhcCCeEEEEhhhhhh
Confidence 2333 344 3566 77 3334667888888889999999874 3333333322111 022 2789999997
Q ss_pred C--CCCCceEEE
Q 018401 257 L--RGPRGAMIF 266 (356)
Q Consensus 257 l--~gp~gG~l~ 266 (356)
+ .+++-|.+.
T Consensus 255 fGlYneRvGnlt 266 (410)
T KOG1412|consen 255 FGLYNERVGNLT 266 (410)
T ss_pred cccccccccceE
Confidence 6 456556443
No 395
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=89.07 E-value=0.11 Score=47.99 Aligned_cols=49 Identities=20% Similarity=0.241 Sum_probs=27.8
Q ss_pred HHcCCEEEEeccchhhhc-ccCCCCCCCCCccEEEeCCCCcCCCCCc---eEEEEecC
Q 018401 217 NKQKAIMLADMAHISGLV-AAGVIPSPFEYADVVTTTTHKSLRGPRG---AMIFFRKG 270 (356)
Q Consensus 217 ~~~g~~vivD~a~~~g~~-~~~~~~~~l~~~D~~~~s~~K~l~gp~g---G~l~~~~~ 270 (356)
+..+..+|.|-|..-.+. |+.- + .+-|++.|+.+| +.|..| |..+++++
T Consensus 159 ~g~~~k~I~D~AYYWPhyTpI~~---~-aD~DiMLFT~SK-~TGHAGSR~GWAlVKD~ 211 (363)
T PF04864_consen 159 NGSSGKVIHDLAYYWPHYTPITA---P-ADHDIMLFTLSK-LTGHAGSRFGWALVKDE 211 (363)
T ss_dssp TTTEEEEEEE-TT-STTTS---S-----B--SEEEEEHHH-HCS-GGG-EEEEEES-H
T ss_pred CCCCcceeeeeeeecccccccCC---C-CCCceEEEEEec-ccCccccccceeeecCH
Confidence 445567899988643322 2211 1 135899999999 566666 98889885
No 396
>PLN02672 methionine S-methyltransferase
Probab=76.65 E-value=45 Score=36.49 Aligned_cols=164 Identities=11% Similarity=0.033 Sum_probs=88.0
Q ss_pred HcCCeeecCCCCCcHH---HHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchH
Q 018401 46 WKGLELIPSENFTSVS---VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSP 120 (356)
Q Consensus 46 ~~~i~L~~~~~~~~~~---V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~ 120 (356)
...++|...+...+++ .+..+...+.+.. -.| |....+...++..+...+..+++. .+++|++..+-..
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1082)
T PLN02672 387 SGSLDLSFEDESVADEKIPFLAYLASALKGLS--YFP----CEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAV 460 (1082)
T ss_pred hhhccccccccccchhhccHHHHHHHHHccCC--CCC----CCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHH
Confidence 3457776555444432 3455555555421 011 111233456777888999999998 5778888667667
Q ss_pred HHHHHHHh------hcCCCCeeeecCCCCCcccCcccc-cccc---cccccceeeEEEecccCCCCCCCCHHHHHHHhhh
Q 018401 121 SNFQVYTA------LLKPHDRIMALDLPHGGHLSHGYQ-TDTK---KISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 190 (356)
Q Consensus 121 a~~~~l~a------l~~~gd~Vl~~~~~~~~~~~~~~~-~~~~---~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~ 190 (356)
++..+++. ++..+...-.+. .|.. +... ...-.+..+.++.-|. + -+.+.+++++
T Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~ 525 (1082)
T PLN02672 461 AIENALRLFSPRLAIVDEHLTRWLPK--------KWLTSLAIENATSDSKSDDVITVIEAPR-----Q--SDLVIELIKK 525 (1082)
T ss_pred HHHHHHHhhChHHHhhhhhhhccCCH--------HHHhHhhhhcccccCccCCeEEEEeCCC-----c--chHHHHHHHh
Confidence 77655543 333332222211 1110 0000 1111112222221111 1 2355666766
Q ss_pred cCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccch
Q 018401 191 FRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHI 230 (356)
Q Consensus 191 ~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~ 230 (356)
.++++|+.+ ..- .-+..-++.|.+.+++.|+.++.|.+..
T Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (1082)
T PLN02672 526 LKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDH 567 (1082)
T ss_pred CCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhh
Confidence 688888876 222 2244468899999999999999998743
No 397
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=70.07 E-value=9 Score=36.50 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=30.7
Q ss_pred CCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 192 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 192 ~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
+.++++++.-+-|.+.+.+++.++|++.|+++++|
T Consensus 143 ~~~~vVLSDY~KG~L~~~q~~I~~ar~~~~pVLvD 177 (467)
T COG2870 143 SFDALVLSDYAKGVLTNVQKMIDLAREAGIPVLVD 177 (467)
T ss_pred cCCEEEEeccccccchhHHHHHHHHHHcCCcEEEC
Confidence 57899998555678888999999999999999999
No 398
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=57.99 E-value=26 Score=35.50 Aligned_cols=100 Identities=15% Similarity=0.052 Sum_probs=52.3
Q ss_pred CCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccc---ccccccceeeEEEecccCCCCCCCCH---HHHHHHh
Q 018401 115 SLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT---KKISAVSIFFETMPYRLNESTGYIDY---DQLEKSA 188 (356)
Q Consensus 115 ~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~~~d~---~~l~~~i 188 (356)
|++|-++.. =+-+++.+|-.+++++ ...+-+ ......|+.... ++ ..++. ..+...+
T Consensus 41 TGgGKSlCy-QiPAll~~G~TLVVSP---------LiSLM~DQV~~l~~~Gi~A~~----ln---S~l~~~e~~~v~~~l 103 (590)
T COG0514 41 TGGGKSLCY-QIPALLLEGLTLVVSP---------LISLMKDQVDQLEAAGIRAAY----LN---STLSREERQQVLNQL 103 (590)
T ss_pred CCCCcchHh-hhHHHhcCCCEEEECc---------hHHHHHHHHHHHHHcCceeeh----hh---cccCHHHHHHHHHHH
Confidence 788878777 5667777897777654 332211 122333422211 12 22333 3344444
Q ss_pred hhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhc
Q 018401 189 TLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLV 234 (356)
Q Consensus 189 ~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~ 234 (356)
...+.++++++|-..-...-++.|. +-.=.++++|+||++--+
T Consensus 104 ~~g~~klLyisPErl~~~~f~~~L~---~~~i~l~vIDEAHCiSqW 146 (590)
T COG0514 104 KSGQLKLLYISPERLMSPRFLELLK---RLPISLVAIDEAHCISQW 146 (590)
T ss_pred hcCceeEEEECchhhcChHHHHHHH---hCCCceEEechHHHHhhc
Confidence 4445788988753321112223332 223458999999986544
No 399
>PRK09375 quinolinate synthetase; Provisional
Probab=57.86 E-value=74 Score=29.66 Aligned_cols=111 Identities=10% Similarity=0.091 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCc
Q 018401 32 PEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEK 111 (356)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~ 111 (356)
.++..++.+.+++ ++.+.| ..++..++|.+ +..+..+ .-+|. .. |+- .+.+.
T Consensus 19 ~~~~~~I~~lk~e-~~a~IL--aH~Yq~~eiq~-~AD~~GD-----------------Sl~Ls----~~-A~~--~~a~~ 70 (319)
T PRK09375 19 ADLKERIKRLKKE-RNAVIL--AHYYQRPEIQD-LADFTGD-----------------SLELA----RF-AAE--TDADT 70 (319)
T ss_pred HHHHHHHHHHHHh-cCcEEE--EecCCCHHHHH-HHHhhcc-----------------HHHHH----HH-HHh--CCCCE
Confidence 4455566654333 344444 68888999854 3333221 01221 22 221 25544
Q ss_pred cccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc
Q 018401 112 WGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 191 (356)
Q Consensus 112 v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~ 191 (356)
|+|++---.|-. ..+++|+.+|+++++.- |+ ++. ...+.+++++..++
T Consensus 71 IvfcGV~FMaEt---AkIL~p~k~VllP~~~A------------------gC-------~mA---d~~~~~~i~~lk~~- 118 (319)
T PRK09375 71 IVFCGVHFMAET---AKILSPEKTVLLPDLEA------------------GC-------SLA---DMCPAEEFRAFKEA- 118 (319)
T ss_pred EEEecceehhhh---HHhcCCCCeEECCCCCC------------------CC-------ccc---ccCCHHHHHHHHHH-
Confidence 444544334444 24577999999988322 21 111 24678888887766
Q ss_pred CCcEEEEcCCC
Q 018401 192 RPKLIVAGASA 202 (356)
Q Consensus 192 ~~k~v~l~~~n 202 (356)
.+.++++++.|
T Consensus 119 ~p~a~vVaYvN 129 (319)
T PRK09375 119 HPDATVVTYVN 129 (319)
T ss_pred CCCCEEEEEeC
Confidence 67788887655
No 400
>KOG0352 consensus ATP-dependent DNA helicase [Replication, recombination and repair]
Probab=56.51 E-value=28 Score=33.61 Aligned_cols=46 Identities=11% Similarity=0.125 Sum_probs=26.5
Q ss_pred CCcEEEEcCCCCCCcccHHHHHHHHHHcC--CEEEEeccchhhhcccCC
Q 018401 192 RPKLIVAGASAYARLYDYERIRKVCNKQK--AIMLADMAHISGLVAAGV 238 (356)
Q Consensus 192 ~~k~v~l~~~n~g~~~~l~~I~~la~~~g--~~vivD~a~~~g~~~~~~ 238 (356)
++|+++++|-.-. ...++.+..-.+.++ .+++||+||++.-+.-|+
T Consensus 113 ~~K~LYITPE~AA-t~~FQ~lLn~L~~r~~L~Y~vVDEAHCVSQWGHDF 160 (641)
T KOG0352|consen 113 TIKMLYITPEGAA-TDGFQKLLNGLANRDVLRYIVVDEAHCVSQWGHDF 160 (641)
T ss_pred ceeEEEEchhhhh-hhhHHHHHHHHhhhceeeeEEechhhhHhhhcccc
Confidence 5788998754311 112344333333344 379999999876554443
No 401
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=56.15 E-value=44 Score=25.75 Aligned_cols=52 Identities=8% Similarity=-0.037 Sum_probs=37.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHc---CCEEEEeccc
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ---KAIMLADMAH 229 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~---g~~vivD~a~ 229 (356)
.+..+++.+.+.+.++++|.++.+++.....+.++.+.+++. ++.+++=+.+
T Consensus 36 ~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~ 90 (119)
T cd02067 36 DVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAI 90 (119)
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCC
Confidence 356778877777768999999876666667788888888876 4556664443
No 402
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=50.94 E-value=54 Score=28.01 Aligned_cols=72 Identities=14% Similarity=0.187 Sum_probs=45.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCC
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHK 255 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K 255 (356)
.+.++++++.+.. ...+|.+..++-....+++++.+-+|+...+++.|.+..-.... ....+ +|++.++.+=
T Consensus 51 TPT~~ev~~l~~a-GadIIAlDaT~R~Rp~~l~~li~~i~~~~~l~MADist~ee~~~--A~~~G---~D~I~TTLsG 122 (192)
T PF04131_consen 51 TPTLKEVDALAEA-GADIIALDATDRPRPETLEELIREIKEKYQLVMADISTLEEAIN--AAELG---FDIIGTTLSG 122 (192)
T ss_dssp S-SHHHHHHHHHC-T-SEEEEE-SSSS-SS-HHHHHHHHHHCTSEEEEE-SSHHHHHH--HHHTT----SEEE-TTTT
T ss_pred CCCHHHHHHHHHc-CCCEEEEecCCCCCCcCHHHHHHHHHHhCcEEeeecCCHHHHHH--HHHcC---CCEEEccccc
Confidence 5678999888876 78899998666333378999999899888999999874322221 12234 8999987443
No 403
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=50.93 E-value=44 Score=25.71 Aligned_cols=48 Identities=21% Similarity=0.243 Sum_probs=39.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
.++++++++.+.. ++.+|++..-.+|.+.-.++..+++++.++-|++-
T Consensus 48 kl~~eEle~~lee-~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 48 KLALEELEELLEE-GPEVIVVGTGQSGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred ccCHHHHHHHHhc-CCcEEEEecCceeEEEeCHHHHHHHHhcCCeEEEe
Confidence 6899999999987 89999887545777776788889999999776654
No 404
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=48.54 E-value=1.7e+02 Score=24.97 Aligned_cols=51 Identities=6% Similarity=0.094 Sum_probs=38.2
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcC----CEEEEecc
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK----AIMLADMA 228 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g----~~vivD~a 228 (356)
.+..+++.+.+.+.++++|.++.+++.....+.++.+..++.+ +.+++=+.
T Consensus 119 ~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~ 173 (201)
T cd02070 119 DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGA 173 (201)
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECC
Confidence 3578888888887789999998766666777888888777763 56666544
No 405
>smart00642 Aamy Alpha-amylase domain.
Probab=48.02 E-value=20 Score=29.90 Aligned_cols=26 Identities=8% Similarity=0.344 Sum_probs=23.4
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.|...+++++++-||++|+-|+.|.+
T Consensus 66 ~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 66 FGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 57778899999999999999999976
No 406
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=47.84 E-value=46 Score=25.48 Aligned_cols=51 Identities=14% Similarity=0.207 Sum_probs=39.1
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHc--CCEEEEeccch
Q 018401 180 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ--KAIMLADMAHI 230 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~--g~~vivD~a~~ 230 (356)
+.+++.+.+.+.++++|.++.+.+.......++++.+++. ++.+++=+.|.
T Consensus 39 ~~~~l~~~~~~~~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 39 PPEELVEALRAERPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp -HHHHHHHHHHTTCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred CHHHHHHHHhcCCCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 4588888887778999999755556666778888888776 78999988773
No 407
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=47.42 E-value=97 Score=24.87 Aligned_cols=42 Identities=12% Similarity=0.109 Sum_probs=31.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHc
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ 219 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~ 219 (356)
.+.++++.+++.+.++++|.++..++.....+.++.+.+++.
T Consensus 40 ~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 40 MTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEA 81 (137)
T ss_pred CCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhc
Confidence 356788888887778999999866655666677777777766
No 408
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=47.24 E-value=71 Score=24.92 Aligned_cols=48 Identities=17% Similarity=0.076 Sum_probs=35.2
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
.++.++++..+.. ++.+|+++.-..+....-.++.+..++.|+-+.+-
T Consensus 45 ~l~~~~l~~ll~~-~peivliGTG~~~~~~~~~~~~~~l~~~Gi~ve~m 92 (117)
T cd05126 45 GLQPEELEELLEE-GVEVIVIGTGQSGALKVPPETVEKLEKRGVEVLVL 92 (117)
T ss_pred cCCHHHHHHHHhc-CCCEEEEcCCCCccccCCHHHHHHHHhcCCEEEEc
Confidence 5789999999886 78998887333444344567777888899877664
No 409
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=46.90 E-value=58 Score=32.42 Aligned_cols=53 Identities=17% Similarity=0.189 Sum_probs=40.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHc--CCEEEEeccchh
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ--KAIMLADMAHIS 231 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~--g~~vivD~a~~~ 231 (356)
.++.+++.+.+.+.++++|.++.. ++......++++.+++. ++.+|+=+.|..
T Consensus 49 ~~~~~~~~~~l~~~~pdvVgis~~-t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 49 PLTDEKLVERLRAHCPDLVLITAI-TPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred CCCHHHHHHHHHhcCcCEEEEecC-cccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 456788888887668999988632 45555677888888887 899999888753
No 410
>KOG1546 consensus Metacaspase involved in regulation of apoptosis [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=46.72 E-value=1.6e+02 Score=27.52 Aligned_cols=113 Identities=16% Similarity=0.078 Sum_probs=59.0
Q ss_pred HHHHHHHHHcCCCCCcccc-CCCch-------HHHH-HHHHhh---cCCCCeeeecCCCCCcccCcccccccccccccce
Q 018401 96 LCQKRALEAFRLDPEKWGG-SLSGS-------PSNF-QVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 163 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v-~~sgs-------~a~~-~~l~al---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 163 (356)
..++.+-+.||.+.+.|++ +..-+ ..|+ .++.-+ .++||..++--.-|++.... + .+-+..|.
T Consensus 89 ~M~~~Lv~rfGFs~ddI~~LtDt~~s~~~~PT~~Nir~Al~wLV~~aq~gD~LvfHYSGHGtr~~~-~----~gDe~dG~ 163 (362)
T KOG1546|consen 89 RMRKLLVERFGFSEDDILMLTDTDESPVRIPTGKNIRRALRWLVESAQPGDSLVFHYSGHGTRQPD-T----NGDEVDGY 163 (362)
T ss_pred HHHHHHHHhhCCChhheEEEecCCCcccccCcHHHHHHHHHHHHhcCCCCCEEEEEecCCCCcCCC-C----CCCCCCCC
Confidence 4678888999997776665 42211 2333 344444 47898877655555554432 1 12333343
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCCCCCcccHHHHH
Q 018401 164 FFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASAYARLYDYERIR 213 (356)
Q Consensus 164 ~~~~v~~~~~~~~~~~d~~~l~~~i~~--~~~k~v~l~-~~n~g~~~~l~~I~ 213 (356)
.-..+|++.+..+-.+|=|..+.++++ +.+++-++. .-+.|.+.|+.+|.
T Consensus 164 DE~I~P~D~~t~G~iIdDe~~r~lV~plp~G~~lt~I~DSCHSGgliDlp~i~ 216 (362)
T KOG1546|consen 164 DETIVPCDHNTQGPIIDDEIFRILVRPLPKGCKLTAISDSCHSGGLIDLPEIE 216 (362)
T ss_pred cceeecccccccccccchHHHHHHHhccCCCceEEEEeecccCCCcccchhhe
Confidence 333354444322224555555555543 245665555 33456666655543
No 411
>PF13378 MR_MLE_C: Enolase C-terminal domain-like; PDB: 3FCP_B 3P0W_D 3VFC_A 3VDG_A 3FJ4_B 3CT2_B 3DGB_A 3V3W_A 3V4B_A 3NO1_E ....
Probab=46.42 E-value=38 Score=25.70 Aligned_cols=50 Identities=4% Similarity=0.069 Sum_probs=38.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEec
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 227 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~ 227 (356)
..++.++++.+...-..++.+.+...|-+....+|+++|+++|+.+..=.
T Consensus 4 ~~~~~~~~~li~~~a~d~~~~~~~~~GGit~~~~i~~~A~~~gi~~~~h~ 53 (111)
T PF13378_consen 4 LFSLHDFRRLIEAGAVDIVQIDPTRCGGITEALRIAALAEAHGIPVMPHS 53 (111)
T ss_dssp SSSHHHHHHHHHTTSCSEEEEBHHHHTSHHHHHHHHHHHHHTT-EEEEBS
T ss_pred CCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHhCCCEEecC
Confidence 35778888888764567777766566777889999999999999888755
No 412
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=45.31 E-value=81 Score=25.10 Aligned_cols=49 Identities=10% Similarity=0.118 Sum_probs=35.3
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCC---EEEEec
Q 018401 179 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKA---IMLADM 227 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~---~vivD~ 227 (356)
...+++-++..++++.+|.++.-++.....++++.+.+++.|+ .+++=+
T Consensus 37 v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG 88 (128)
T cd02072 37 SPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGG 88 (128)
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEEC
Confidence 4677777777666899998876556677778888888888753 455533
No 413
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=45.01 E-value=48 Score=31.31 Aligned_cols=57 Identities=18% Similarity=0.188 Sum_probs=39.2
Q ss_pred CCCHHHHHHHhh----hcCCcEEEEcC-----C-CCC-CcccHHHHHHHHHHcCCEEEEeccchhhhc
Q 018401 178 YIDYDQLEKSAT----LFRPKLIVAGA-----S-AYA-RLYDYERIRKVCNKQKAIMLADMAHISGLV 234 (356)
Q Consensus 178 ~~d~~~l~~~i~----~~~~k~v~l~~-----~-n~g-~~~~l~~I~~la~~~g~~vivD~a~~~g~~ 234 (356)
..+++++..++. ..+.+++++.. . .++ ...++..|..+-+..+.++|+|.+|+.|..
T Consensus 218 ~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~s 285 (352)
T PRK13396 218 AATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKS 285 (352)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcH
Confidence 447887776553 22445666532 2 233 666899999887777999999999998754
No 414
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=43.80 E-value=30 Score=32.27 Aligned_cols=84 Identities=12% Similarity=0.192 Sum_probs=52.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEc----CCC-CCCcccHHHHHHHHHHcC------CEEEEeccchhhhccc-CC--CCCCC
Q 018401 178 YIDYDQLEKSATLFRPKLIVAG----ASA-YARLYDYERIRKVCNKQK------AIMLADMAHISGLVAA-GV--IPSPF 243 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~----~~n-~g~~~~l~~I~~la~~~g------~~vivD~a~~~g~~~~-~~--~~~~l 243 (356)
.+-++.++.+..+ +..+|++. -+| .....++++|.+++++.. ++++.|+..+-..+.- .. ...+
T Consensus 208 aVafDAi~~Akar-~~DvvliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~- 285 (340)
T COG0552 208 AVAFDAIQAAKAR-GIDVVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVG- 285 (340)
T ss_pred HHHHHHHHHHHHc-CCCEEEEeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcC-
Confidence 3556777777776 78899885 233 345667999999998864 6777798844322210 00 1122
Q ss_pred CCccEEEeCCCCcCCCCCceEEEE
Q 018401 244 EYADVVTTTTHKSLRGPRGAMIFF 267 (356)
Q Consensus 244 ~~~D~~~~s~~K~l~gp~gG~l~~ 267 (356)
+|-++.+ |.=+...||+++.
T Consensus 286 --l~GiIlT--KlDgtAKGG~il~ 305 (340)
T COG0552 286 --LDGIILT--KLDGTAKGGIILS 305 (340)
T ss_pred --CceEEEE--ecccCCCcceeee
Confidence 5655555 7336678877664
No 415
>TIGR00629 uvde UV damage endonuclease UvdE. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=43.47 E-value=26 Score=32.54 Aligned_cols=33 Identities=15% Similarity=0.188 Sum_probs=27.7
Q ss_pred EcCCCCCCcccHHHHHHHHHHcCCEEEEeccch
Q 018401 198 AGASAYARLYDYERIRKVCNKQKAIMLADMAHI 230 (356)
Q Consensus 198 l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~ 230 (356)
+++-|+|....++++..+|++.++++++|..|.
T Consensus 190 L~lEnd~k~~sl~evL~lc~e~~iP~v~D~hHh 222 (312)
T TIGR00629 190 LVLENDDVTWTVEDLLPVCEELNIPFVLDFHHH 222 (312)
T ss_pred EEeccCCCcCCHHHHHHHHHhcCCCEEEEhHHh
Confidence 444567777899999999999999999997764
No 416
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=41.89 E-value=66 Score=27.88 Aligned_cols=71 Identities=15% Similarity=0.117 Sum_probs=47.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcc-cHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCC
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLY-DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 254 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~-~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~ 254 (356)
...+++++++... ...+|.+..+.-.... +++++.+-.|..|.+++.|++..-... .-...+ +|++-++.+
T Consensus 85 TptlkeVd~L~~~-Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~~~l~MAD~St~ee~l--~a~~~G---~D~IGTTLs 156 (229)
T COG3010 85 TPTLKEVDALAEA-GADIIAFDATDRPRPDGDLEELIARIKYPGQLAMADCSTFEEGL--NAHKLG---FDIIGTTLS 156 (229)
T ss_pred cccHHHHHHHHHC-CCcEEEeecccCCCCcchHHHHHHHhhcCCcEEEeccCCHHHHH--HHHHcC---CcEEecccc
Confidence 4467888877766 7788888654422222 889988888888999999987422111 112244 899887743
No 417
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=41.67 E-value=20 Score=32.36 Aligned_cols=28 Identities=11% Similarity=0.360 Sum_probs=24.6
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+..|+..+++++++.||++|+-||+|.+
T Consensus 46 ~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 46 PRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp TTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cccchhhhhhhhhhccccccceEEEeee
Confidence 3467778899999999999999999977
No 418
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=40.90 E-value=26 Score=34.60 Aligned_cols=28 Identities=11% Similarity=0.121 Sum_probs=25.5
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+..|+..+++++++.||++|+.||+|.+
T Consensus 75 ~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 75 TKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4478888999999999999999999987
No 419
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=40.64 E-value=51 Score=26.29 Aligned_cols=49 Identities=14% Similarity=0.093 Sum_probs=29.2
Q ss_pred CHHHHHHHhhhcCCcEEEEc-CCC------CCCcc-----cHHHHHHHHHHcCCEEEEeccc
Q 018401 180 DYDQLEKSATLFRPKLIVAG-ASA------YARLY-----DYERIRKVCNKQKAIMLADMAH 229 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~-~~n------~g~~~-----~l~~I~~la~~~g~~vivD~a~ 229 (356)
|++-+.+.+++..++++++. |.| +|... -.++|..+|+++|+ =+.|.++
T Consensus 37 Dl~l~L~~~k~~g~~~lfVi~PvNg~wydytG~~~~~r~~~y~kI~~~~~~~gf-~v~D~s~ 97 (130)
T PF04914_consen 37 DLQLLLDVCKELGIDVLFVIQPVNGKWYDYTGLSKEMRQEYYKKIKYQLKSQGF-NVADFSD 97 (130)
T ss_dssp HHHHHHHHHHHTT-EEEEEE----HHHHHHTT--HHHHHHHHHHHHHHHHTTT---EEE-TT
T ss_pred HHHHHHHHHHHcCCceEEEecCCcHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-EEEeccc
Confidence 56666667777678888877 665 24222 25688999999998 8888775
No 420
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=40.00 E-value=1.2e+02 Score=20.54 Aligned_cols=46 Identities=20% Similarity=0.188 Sum_probs=30.1
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEE
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 224 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vi 224 (356)
+...++++.+...+.+.+.+.++.++ ......++.++++++|+.++
T Consensus 13 ~~~~~~~~~~~a~~~g~~~v~iTDh~--~~~~~~~~~~~~~~~gi~~i 58 (67)
T smart00481 13 GALSPEELVKRAKELGLKAIAITDHG--NLFGAVEFYKAAKKAGIKPI 58 (67)
T ss_pred ccCCHHHHHHHHHHcCCCEEEEeeCC--cccCHHHHHHHHHHcCCeEE
Confidence 45567777776666578889888444 12233466677778887665
No 421
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=39.96 E-value=1e+02 Score=24.75 Aligned_cols=43 Identities=14% Similarity=0.163 Sum_probs=32.2
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCC
Q 018401 179 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKA 221 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~ 221 (356)
..++++-++..++++.+|.++.-++.....++++.+.+++.|.
T Consensus 39 v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 39 SPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred CCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCC
Confidence 4678877777766889988875555566678888888888763
No 422
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=39.83 E-value=30 Score=31.01 Aligned_cols=92 Identities=12% Similarity=0.034 Sum_probs=47.5
Q ss_pred cccCCCchHHHHHHHHhhcCCCCeeeecC-CCCCcccCcccccccccccccceeeEEEecccCCCCCCC-CHHHHHHHhh
Q 018401 112 WGGSLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI-DYDQLEKSAT 189 (356)
Q Consensus 112 v~v~~sgs~a~~~~l~al~~~gd~Vl~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-d~~~l~~~i~ 189 (356)
|.+.+|++++-. +...+.+.|. |+++. .++++-.. . ....+ ..+ . .+.+ |.+++++.+.
T Consensus 3 ILvlgGTtE~r~-la~~L~~~g~-v~~sv~t~~g~~~~------~--~~~~~---~~v--~----~G~lg~~~~l~~~l~ 63 (249)
T PF02571_consen 3 ILVLGGTTEGRK-LAERLAEAGY-VIVSVATSYGGELL------K--PELPG---LEV--R----VGRLGDEEGLAEFLR 63 (249)
T ss_pred EEEEechHHHHH-HHHHHHhcCC-EEEEEEhhhhHhhh------c--cccCC---ceE--E----ECCCCCHHHHHHHHH
Confidence 455677778888 6677777777 55443 22221110 0 00000 001 1 1455 7888888887
Q ss_pred hcCCcEEEEcCCCCCCcccHH-HHHHHHHHcCCEEE
Q 018401 190 LFRPKLIVAGASAYARLYDYE-RIRKVCNKQKAIML 224 (356)
Q Consensus 190 ~~~~k~v~l~~~n~g~~~~l~-~I~~la~~~g~~vi 224 (356)
+++.++|+ ..++ |.-..+. .+.+.|++.|+..+
T Consensus 64 ~~~i~~vI-DATH-PfA~~is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 64 ENGIDAVI-DATH-PFAAEISQNAIEACRELGIPYL 97 (249)
T ss_pred hCCCcEEE-ECCC-chHHHHHHHHHHHHhhcCcceE
Confidence 65555543 3222 4333333 35567777777655
No 423
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=39.03 E-value=31 Score=35.23 Aligned_cols=31 Identities=10% Similarity=0.225 Sum_probs=26.8
Q ss_pred cCCC-CCCcccHHHHHHHHHHcCCEEEEeccc
Q 018401 199 GASA-YARLYDYERIRKVCNKQKAIMLADMAH 229 (356)
Q Consensus 199 ~~~n-~g~~~~l~~I~~la~~~g~~vivD~a~ 229 (356)
.+++ +|...+++++++-||++||-||+|-+.
T Consensus 205 Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~ 236 (628)
T COG0296 205 APTSRYGTPEDFKALVDAAHQAGIGVILDWVP 236 (628)
T ss_pred cccccCCCHHHHHHHHHHHHHcCCEEEEEecC
Confidence 3444 788889999999999999999999773
No 424
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=38.95 E-value=67 Score=29.77 Aligned_cols=52 Identities=15% Similarity=0.158 Sum_probs=33.6
Q ss_pred CCCHHHHHHHhh---h--cCCcEEEEc---CCCCCCcccHHHHHHHHHHcCCEEEEeccch
Q 018401 178 YIDYDQLEKSAT---L--FRPKLIVAG---ASAYARLYDYERIRKVCNKQKAIMLADMAHI 230 (356)
Q Consensus 178 ~~d~~~l~~~i~---~--~~~k~v~l~---~~n~g~~~~l~~I~~la~~~g~~vivD~a~~ 230 (356)
.++.++++..++ . ..-.+|+++ |++.+ ...+.+|.++|++.|+.+++|.+..
T Consensus 110 ~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~-~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 110 EISEAELEQFLEQLKALLESDDIVVLSGSLPPGVP-PDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred CCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCC-HHHHHHHHHHHHhcCCeEEEECChH
Confidence 555555554332 2 124567775 33333 3348899999999999999998754
No 425
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=38.39 E-value=1.2e+02 Score=24.23 Aligned_cols=54 Identities=15% Similarity=0.113 Sum_probs=36.7
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc----HHHHH-HHHHHc-CCE-EEEeccch
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD----YERIR-KVCNKQ-KAI-MLADMAHI 230 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~----l~~I~-~la~~~-g~~-vivD~a~~ 230 (356)
...+++.|.+.+.+.++..++++ |.+ .|...+ +.+.+ ++.++. ++. ..+||-.+
T Consensus 36 ~~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 36 REKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CCCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred CchHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 46789999999998889999998 766 565444 23333 344454 774 67898754
No 426
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=37.10 E-value=80 Score=28.30 Aligned_cols=50 Identities=8% Similarity=0.003 Sum_probs=40.5
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...+.+++++.+......+|.+.++..|-+.+..+++++|+++|+.++.=
T Consensus 188 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~~~~~A~~~gi~~~~~ 237 (265)
T cd03315 188 SAFTPHDAFRELALGAADAVNIKTAKTGGLTKAQRVLAVAEALGLPVMVG 237 (265)
T ss_pred CCCCHHHHHHHHHhCCCCEEEEecccccCHHHHHHHHHHHHHcCCcEEec
Confidence 35678888888876457888777777888888999999999999987764
No 427
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=37.03 E-value=1.1e+02 Score=27.48 Aligned_cols=55 Identities=11% Similarity=0.147 Sum_probs=38.3
Q ss_pred CCCHHHHHHHhhh----cCCcEEEEc--CCCC-C---CcccHHHHHHHHHHcCCEEEEeccchhh
Q 018401 178 YIDYDQLEKSATL----FRPKLIVAG--ASAY-A---RLYDYERIRKVCNKQKAIMLADMAHISG 232 (356)
Q Consensus 178 ~~d~~~l~~~i~~----~~~k~v~l~--~~n~-g---~~~~l~~I~~la~~~g~~vivD~a~~~g 232 (356)
..++++++.++.. .+..++++. .+.+ | ...++..|..+.+.++.+|+.|..|+.|
T Consensus 142 ~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 142 GNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 3478887776532 223555553 3334 4 4567889998888889999999999877
No 428
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=36.51 E-value=66 Score=29.71 Aligned_cols=50 Identities=10% Similarity=-0.075 Sum_probs=39.9
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...+.+++++.+.....++|.+.++..|-+.+..+++++|+++|+.++.=
T Consensus 236 ~~~~~~~~~~~~~~~~~d~v~~~~~~~GGi~~~~~~~~~a~~~gi~~~~~ 285 (316)
T cd03319 236 SCFSAADAARLAGGGAYDGINIKLMKTGGLTEALRIADLARAAGLKVMVG 285 (316)
T ss_pred CCCCHHHHHHHHhcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCCEEEE
Confidence 35678888888876456777777777888888999999999999977764
No 429
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=36.40 E-value=96 Score=22.52 Aligned_cols=45 Identities=11% Similarity=0.057 Sum_probs=31.5
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 182 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 182 ~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
++..+++...+.++|++. .+.+ ..-.+.|.++|+.++++++...+
T Consensus 14 ~~vlkaIk~gkakLViiA-~Da~-~~~~k~i~~~c~~~~Vpv~~~~t 58 (82)
T PRK13601 14 KQTLKAITNCNVLQVYIA-KDAE-EHVTKKIKELCEEKSIKIVYIDT 58 (82)
T ss_pred HHHHHHHHcCCeeEEEEe-CCCC-HHHHHHHHHHHHhCCCCEEEeCC
Confidence 455667776578888885 2223 23467899999999999876554
No 430
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=36.15 E-value=90 Score=22.58 Aligned_cols=45 Identities=13% Similarity=-0.027 Sum_probs=30.8
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEec
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 227 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~ 227 (356)
.++..+++.+.+.++|++. .+.+. .-.+.|..+|++++++++.-.
T Consensus 16 ~~~v~kai~~gkaklViiA-~D~~~-~~~~~i~~~c~~~~Vp~~~~~ 60 (82)
T PRK13602 16 TKQTVKALKRGSVKEVVVA-EDADP-RLTEKVEALANEKGVPVSKVD 60 (82)
T ss_pred HHHHHHHHHcCCeeEEEEE-CCCCH-HHHHHHHHHHHHcCCCEEEEC
Confidence 4566777776678888885 22222 246788899999999876543
No 431
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=35.66 E-value=64 Score=27.05 Aligned_cols=48 Identities=15% Similarity=0.178 Sum_probs=35.4
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcC--CEEEEeccchh
Q 018401 180 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK--AIMLADMAHIS 231 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g--~~vivD~a~~~ 231 (356)
|..++++++.. ....+++= +|.+..++++.+..+++| +++++|-..+.
T Consensus 12 ~~~~le~~les-~~~~vflL---~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl 61 (181)
T COG1954 12 DNKDLEKALES-ESQYVFLL---TGHILNIKEIVKKLKNRGKTVFIHVDLVEGL 61 (181)
T ss_pred hHHHHHHHhcC-CCeEEEEE---echhhhHHHHHHHHHhCCcEEEEEeHHhccc
Confidence 56788888876 66766653 466778999999999887 46777776543
No 432
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=35.61 E-value=1.7e+02 Score=25.28 Aligned_cols=95 Identities=13% Similarity=0.041 Sum_probs=50.3
Q ss_pred CCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHH
Q 018401 108 DPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKS 187 (356)
Q Consensus 108 ~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~ 187 (356)
+...++|.++|..+.. -+..+++.|-.|.+.+++...-+. ...-.| .+..+. .....+++
T Consensus 8 ~gk~vlVvGgG~va~r-k~~~Ll~~ga~VtVvsp~~~~~l~--------~l~~~~-~i~~~~-------~~~~~~dl--- 67 (205)
T TIGR01470 8 EGRAVLVVGGGDVALR-KARLLLKAGAQLRVIAEELESELT--------LLAEQG-GITWLA-------RCFDADIL--- 67 (205)
T ss_pred CCCeEEEECcCHHHHH-HHHHHHHCCCEEEEEcCCCCHHHH--------HHHHcC-CEEEEe-------CCCCHHHh---
Confidence 3345677888888777 667778888777776644321111 000011 122221 11222332
Q ss_pred hhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEE-EEecc
Q 018401 188 ATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIM-LADMA 228 (356)
Q Consensus 188 i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~v-ivD~a 228 (356)
. ...+|++++ +....-+.|...|++.++++ ++|..
T Consensus 68 -~--~~~lVi~at---~d~~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 68 -E--GAFLVIAAT---DDEELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred -C--CcEEEEECC---CCHHHHHHHHHHHHHcCCEEEECCCc
Confidence 2 345555542 32323468999999999877 35544
No 433
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=35.17 E-value=94 Score=29.52 Aligned_cols=54 Identities=13% Similarity=0.238 Sum_probs=38.4
Q ss_pred CCHHHHHHHhhh----cCCcEEEEc--CCCCC----CcccHHHHHHHHHHcCCEEEEeccchhh
Q 018401 179 IDYDQLEKSATL----FRPKLIVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHISG 232 (356)
Q Consensus 179 ~d~~~l~~~i~~----~~~k~v~l~--~~n~g----~~~~l~~I~~la~~~g~~vivD~a~~~g 232 (356)
.++++++.++.. .+.+++++. .++++ ...++..|..+-++++++|++|..|+.|
T Consensus 236 ~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 236 ATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 578887776532 234677663 33333 3358889988888899999999999877
No 434
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=34.68 E-value=1.3e+02 Score=24.31 Aligned_cols=50 Identities=18% Similarity=0.176 Sum_probs=34.2
Q ss_pred CCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHH-HHHHHH----HHcCC-EEEEecc
Q 018401 179 IDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYE-RIRKVC----NKQKA-IMLADMA 228 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~-~I~~la----~~~g~-~vivD~a 228 (356)
.|++.|.+.+.+.++..|++. |-| .|...+.. .+.+++ ++.++ ++++|+-
T Consensus 40 ~~~~~l~~li~~~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DER 97 (141)
T COG0816 40 QDFNALLKLVKEYQVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDER 97 (141)
T ss_pred hhHHHHHHHHHHhCCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 589999999988889999998 776 56555533 233333 33455 4678875
No 435
>PRK09590 celB cellobiose phosphotransferase system IIB component; Reviewed
Probab=34.52 E-value=71 Score=24.35 Aligned_cols=57 Identities=9% Similarity=0.038 Sum_probs=33.6
Q ss_pred cEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCC
Q 018401 194 KLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 254 (356)
Q Consensus 194 k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~ 254 (356)
+++++|.+..++-.=.+++.++|+++|+-+-++.+-. +-......... +|+++.++|
T Consensus 3 kILlvCg~G~STSlla~k~k~~~~e~gi~~~i~a~~~-~e~~~~~~~~~---~DvIll~PQ 59 (104)
T PRK09590 3 KALIICAAGMSSSMMAKKTTEYLKEQGKDIEVDAITA-TEGEKAIAAAE---YDLYLVSPQ 59 (104)
T ss_pred EEEEECCCchHHHHHHHHHHHHHHHCCCceEEEEecH-HHHHHhhccCC---CCEEEEChH
Confidence 3556664333333447888999999999888876632 22221111122 788887764
No 436
>COG2877 KdsA 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase [Cell envelope biogenesis, outer membrane]
Probab=34.46 E-value=68 Score=28.44 Aligned_cols=40 Identities=15% Similarity=0.272 Sum_probs=26.6
Q ss_pred CCcEEEEc-CCCCC---CcccHHHHHHHHHHcCCEEEEeccchhh
Q 018401 192 RPKLIVAG-ASAYA---RLYDYERIRKVCNKQKAIMLADMAHISG 232 (356)
Q Consensus 192 ~~k~v~l~-~~n~g---~~~~l~~I~~la~~~g~~vivD~a~~~g 232 (356)
+.+++++. .++.| .+.|+..+. +-++.|.+||.|++|+.-
T Consensus 159 n~~v~lcERG~sFGYnnLV~DMrsl~-iM~~~~~PViFDaTHSvQ 202 (279)
T COG2877 159 NNKVILCERGASFGYNNLVVDMRSLP-IMKEFGAPVIFDATHSVQ 202 (279)
T ss_pred CCcEEEEeccCccCcchhHHHhhhhH-HHHHcCCCeEEeccccee
Confidence 45666655 66666 344555443 457789999999999753
No 437
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=34.41 E-value=39 Score=30.28 Aligned_cols=90 Identities=12% Similarity=-0.049 Sum_probs=51.6
Q ss_pred cccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCC-CHHHHHHHhhh
Q 018401 112 WGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI-DYDQLEKSATL 190 (356)
Q Consensus 112 v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-d~~~l~~~i~~ 190 (356)
+.+.+|++++-. +...+.+.|-.|+++..+..+... ..+ + ++ ..+.+ |.+.+++.+.+
T Consensus 5 IlvlgGT~egr~-la~~L~~~g~~v~~Svat~~g~~~-----------~~~-----~--~v--~~G~l~~~~~l~~~l~~ 63 (248)
T PRK08057 5 ILLLGGTSEARA-LARALAAAGVDIVLSLAGRTGGPA-----------DLP-----G--PV--RVGGFGGAEGLAAYLRE 63 (248)
T ss_pred EEEEechHHHHH-HHHHHHhCCCeEEEEEccCCCCcc-----------cCC-----c--eE--EECCCCCHHHHHHHHHH
Confidence 455677778777 556666677777765422211100 011 1 11 12566 88999999987
Q ss_pred cCCcEEEEcCCCCCCcccHH-HHHHHHHHcCCEEE
Q 018401 191 FRPKLIVAGASAYARLYDYE-RIRKVCNKQKAIML 224 (356)
Q Consensus 191 ~~~k~v~l~~~n~g~~~~l~-~I~~la~~~g~~vi 224 (356)
++.++| +..+ -|.-..+. .+.+.|++.|+..+
T Consensus 64 ~~i~~V-IDAT-HPfA~~is~~a~~ac~~~~ipyi 96 (248)
T PRK08057 64 EGIDLV-IDAT-HPYAAQISANAAAACRALGIPYL 96 (248)
T ss_pred CCCCEE-EECC-CccHHHHHHHHHHHHHHhCCcEE
Confidence 666665 3332 25433343 45678888888655
No 438
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=34.35 E-value=1.4e+02 Score=23.19 Aligned_cols=49 Identities=4% Similarity=0.024 Sum_probs=33.9
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHc---CCEEEEec
Q 018401 179 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ---KAIMLADM 227 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~---g~~vivD~ 227 (356)
...+++.+.+.+.++++|.+|.++......++++.+..++. ++.+++=+
T Consensus 37 vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG 88 (122)
T cd02071 37 QTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGG 88 (122)
T ss_pred CCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 56777777776668999999866544555677877777776 45555543
No 439
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=33.61 E-value=1.8e+02 Score=24.84 Aligned_cols=51 Identities=12% Similarity=0.181 Sum_probs=38.7
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcC----CEEEEecc
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK----AIMLADMA 228 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g----~~vivD~a 228 (356)
.+..+++.+.+.+.++++|.++.+++.....+.++.+.+++.+ +.+++=+.
T Consensus 121 ~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~ 175 (197)
T TIGR02370 121 DVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGA 175 (197)
T ss_pred CCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEECh
Confidence 4578888888887789999998766666667888888888774 56666443
No 440
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=33.26 E-value=1.1e+02 Score=27.47 Aligned_cols=56 Identities=13% Similarity=0.263 Sum_probs=38.5
Q ss_pred CCCHHHHHHHhhh----cCCcEEEEc--CCCCC----CcccHHHHHHHHHHcCCEEEEeccchhhh
Q 018401 178 YIDYDQLEKSATL----FRPKLIVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHISGL 233 (356)
Q Consensus 178 ~~d~~~l~~~i~~----~~~k~v~l~--~~n~g----~~~~l~~I~~la~~~g~~vivD~a~~~g~ 233 (356)
..++++++.++.. .+.+++++. .+.++ ...++..|..+.+..+.+|++|.+|+.|.
T Consensus 132 ~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 132 MATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 5677777765532 234666663 22233 25678888888877899999999998774
No 441
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=33.19 E-value=1.8e+02 Score=23.19 Aligned_cols=47 Identities=13% Similarity=0.094 Sum_probs=31.8
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcC---CEEEE
Q 018401 179 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK---AIMLA 225 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g---~~viv 225 (356)
...+++-++..+.++.+|.+|...+....-+.++.+..++.+ +.+++
T Consensus 40 ~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~viv 89 (132)
T TIGR00640 40 QTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVV 89 (132)
T ss_pred CCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 456777666655588999988655555656788888777764 34444
No 442
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=32.97 E-value=1.8e+02 Score=23.18 Aligned_cols=46 Identities=11% Similarity=-0.004 Sum_probs=27.8
Q ss_pred CHHHHHHHhhhcCCcEEEEc----------CCCCCC------cccHHHHHHHHHHcCCEEEE
Q 018401 180 DYDQLEKSATLFRPKLIVAG----------ASAYAR------LYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~----------~~n~g~------~~~l~~I~~la~~~g~~viv 225 (356)
|.+++.+.+++.++..+++. |+..|. ..-+.++.+.||+.|+-+++
T Consensus 1 D~~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L~~Dllge~v~a~h~~Girv~a 62 (132)
T PF14871_consen 1 DPEQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGLKRDLLGEQVEACHERGIRVPA 62 (132)
T ss_pred CHHHHHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCCCcCHHHHHHHHHHHCCCEEEE
Confidence 45556666655455555541 222232 22378999999999987664
No 443
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=32.49 E-value=88 Score=27.22 Aligned_cols=36 Identities=19% Similarity=0.024 Sum_probs=26.8
Q ss_pred CCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCC
Q 018401 107 LDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPH 143 (356)
Q Consensus 107 ~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~ 143 (356)
.+...+++.+||+.+.. =+..+++.|..|.+..++.
T Consensus 10 l~~k~VlvvGgG~va~r-Ka~~ll~~ga~v~Vvs~~~ 45 (210)
T COG1648 10 LEGKKVLVVGGGSVALR-KARLLLKAGADVTVVSPEF 45 (210)
T ss_pred cCCCEEEEECCCHHHHH-HHHHHHhcCCEEEEEcCCc
Confidence 34445677999998877 5677788999988877555
No 444
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=32.20 E-value=88 Score=28.02 Aligned_cols=22 Identities=18% Similarity=0.297 Sum_probs=9.5
Q ss_pred cHHHHHHHHHHc--CCEEEEeccc
Q 018401 208 DYERIRKVCNKQ--KAIMLADMAH 229 (356)
Q Consensus 208 ~l~~I~~la~~~--g~~vivD~a~ 229 (356)
++++.++.+.+. +-+++.=+++
T Consensus 117 ~~~eA~~~l~~~~~~~iflttGsk 140 (249)
T PF02571_consen 117 SYEEAAELLKELGGGRIFLTTGSK 140 (249)
T ss_pred CHHHHHHHHhhcCCCCEEEeCchh
Confidence 455555554322 3344444443
No 445
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=31.60 E-value=58 Score=26.67 Aligned_cols=42 Identities=19% Similarity=0.372 Sum_probs=25.5
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcC
Q 018401 179 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK 220 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g 220 (356)
-+.+.|.+.+.++++.+|+++..+.....-.+.|.++.++..
T Consensus 50 ~~~~~l~~~i~~~kP~vI~v~g~~~~s~~l~~~v~~~v~~~~ 91 (150)
T PF14639_consen 50 EDMERLKKFIEKHKPDVIAVGGNSRESRKLYDDVRDIVEELD 91 (150)
T ss_dssp HHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHHHHHHHhh
Confidence 456777788888899999997544433333566777777654
No 446
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=31.48 E-value=1.1e+02 Score=26.82 Aligned_cols=43 Identities=19% Similarity=0.370 Sum_probs=31.1
Q ss_pred HHHHHhhhcCCcEEEEcCCCC---C-CcccHHHHHHHHHHcCC-EEEEe
Q 018401 183 QLEKSATLFRPKLIVAGASAY---A-RLYDYERIRKVCNKQKA-IMLAD 226 (356)
Q Consensus 183 ~l~~~i~~~~~k~v~l~~~n~---g-~~~~l~~I~~la~~~g~-~vivD 226 (356)
++.+++.. +|+.+++..+-. | .+.++++|....+..|+ ++|.|
T Consensus 149 EIARaLa~-~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITD 196 (243)
T COG1137 149 EIARALAA-NPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITD 196 (243)
T ss_pred HHHHHHhc-CCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEcc
Confidence 45566666 799999983332 3 66788888888888887 66777
No 447
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=31.27 E-value=93 Score=27.89 Aligned_cols=23 Identities=17% Similarity=0.182 Sum_probs=21.2
Q ss_pred cHHHHHHHHHHcCCEEEEeccch
Q 018401 208 DYERIRKVCNKQKAIMLADMAHI 230 (356)
Q Consensus 208 ~l~~I~~la~~~g~~vivD~a~~ 230 (356)
+.+++.++.+++++-+++|++|=
T Consensus 54 ~~e~l~~~l~e~~i~llIDATHP 76 (257)
T COG2099 54 GAEGLAAFLREEGIDLLIDATHP 76 (257)
T ss_pred CHHHHHHHHHHcCCCEEEECCCh
Confidence 68899999999999999999983
No 448
>cd05564 PTS_IIB_chitobiose_lichenan PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB d
Probab=31.12 E-value=1.1e+02 Score=22.79 Aligned_cols=54 Identities=13% Similarity=0.107 Sum_probs=32.4
Q ss_pred EEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCC
Q 018401 195 LIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 254 (356)
Q Consensus 195 ~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~ 254 (356)
++++|.+-.++-.=.+++.+.++++|+.+-++.+.... +.. ... ..|+++.++|
T Consensus 2 Il~~Cg~G~sTS~~~~ki~~~~~~~~~~~~v~~~~~~~-~~~--~~~---~~Diil~~Pq 55 (96)
T cd05564 2 ILLVCSAGMSTSILVKKMKKAAEKRGIDAEIEAVPESE-LEE--YID---DADVVLLGPQ 55 (96)
T ss_pred EEEEcCCCchHHHHHHHHHHHHHHCCCceEEEEecHHH-HHH--hcC---CCCEEEEChh
Confidence 45566433222223779999999999988777664222 211 111 2788887764
No 449
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=30.73 E-value=1.9e+02 Score=25.18 Aligned_cols=50 Identities=12% Similarity=0.159 Sum_probs=37.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHc--CCEEEEec
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ--KAIMLADM 227 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~--g~~vivD~ 227 (356)
.+..+++.+.+.+.++++|.++...+.....++++.+..++. ++.+++=+
T Consensus 125 ~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~vGG 176 (213)
T cd02069 125 MVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLIGG 176 (213)
T ss_pred CCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 357888888888878999999866666666788887777766 45555543
No 450
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=30.38 E-value=2.5e+02 Score=21.45 Aligned_cols=53 Identities=11% Similarity=0.081 Sum_probs=36.2
Q ss_pred CCCHHHHHHHhhhcC-CcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE-eccchhh
Q 018401 178 YIDYDQLEKSATLFR-PKLIVAGASAYARLYDYERIRKVCNKQKAIMLA-DMAHISG 232 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~-~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv-D~a~~~g 232 (356)
.++.++|...+.. . +.+|+++.-..+ ..+-.++.+..+++|+-+-+ |-..+..
T Consensus 38 ~l~~~~l~~~~~~-~~peiliiGTG~~~-~~~~~~~~~~l~~~gI~vE~m~T~aAcr 92 (109)
T cd00248 38 DLDPEALLPLLAE-DRPDILLIGTGAEI-AFLPRALRAALRAAGIGVEVMSTGAACR 92 (109)
T ss_pred cCCHHHHHHHHhh-CCCCEEEEcCCCCC-CcCCHHHHHHHHHcCCeEEEeCcHHHHH
Confidence 6789999888775 5 889998733334 33556788888999986554 4433333
No 451
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=30.07 E-value=1.3e+02 Score=22.08 Aligned_cols=46 Identities=9% Similarity=0.152 Sum_probs=30.4
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHH-HHHHHHHcCCEEEEecc
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYER-IRKVCNKQKAIMLADMA 228 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~-I~~la~~~g~~vivD~a 228 (356)
..+..+.+...+.++|++..... ...... |..+|++++++++.=..
T Consensus 20 ~~~v~k~l~~~~~~lvilA~d~~--~~~~~~~l~~~c~~~~Ip~~~~~s 66 (95)
T PF01248_consen 20 IKEVLKALKKGKAKLVILAEDCS--PDSIKKHLPALCEEKNIPYVFVPS 66 (95)
T ss_dssp HHHHHHHHHTTCESEEEEETTSS--SGHHHHHHHHHHHHTTEEEEEESH
T ss_pred hHHHHHHHHcCCCcEEEEcCCCC--hhhhcccchhheeccceeEEEECC
Confidence 45667777765778888852211 223555 88899999998765443
No 452
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=29.94 E-value=2.3e+02 Score=25.41 Aligned_cols=94 Identities=14% Similarity=0.069 Sum_probs=47.8
Q ss_pred cccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc
Q 018401 112 WGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 191 (356)
Q Consensus 112 v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~ 191 (356)
|++.++++++.. +...+.+.|..|+++.-+-.+.. ...-.| ...+ . .+.+|.+.+.+.+.+.
T Consensus 3 ILvlGGT~egr~-la~~L~~~g~~v~~s~~t~~~~~---------~~~~~g--~~~v--~----~g~l~~~~l~~~l~~~ 64 (256)
T TIGR00715 3 VLLMGGTVDSRA-IAKGLIAQGIEILVTVTTSEGKH---------LYPIHQ--ALTV--H----TGALDPQELREFLKRH 64 (256)
T ss_pred EEEEechHHHHH-HHHHHHhCCCeEEEEEccCCccc---------cccccC--CceE--E----ECCCCHHHHHHHHHhc
Confidence 444656566555 56666677877776542211110 000011 1111 1 1457888888888876
Q ss_pred CCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEE
Q 018401 192 RPKLIVAGASAYARLYDYERIRKVCNKQKAIML 224 (356)
Q Consensus 192 ~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vi 224 (356)
++++|+-..+-+-... -+.+.+.|++.|+..+
T Consensus 65 ~i~~VIDAtHPfA~~i-s~~a~~a~~~~~ipyl 96 (256)
T TIGR00715 65 SIDILVDATHPFAAQI-TTNATAVCKELGIPYV 96 (256)
T ss_pred CCCEEEEcCCHHHHHH-HHHHHHHHHHhCCcEE
Confidence 7776654322222111 2245567777776433
No 453
>PLN00196 alpha-amylase; Provisional
Probab=29.93 E-value=51 Score=32.13 Aligned_cols=27 Identities=11% Similarity=0.234 Sum_probs=23.8
Q ss_pred CCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 202 AYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 202 n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
..|...+++++++-||++|+-||.|.+
T Consensus 87 ~fGt~~elk~Lv~~aH~~GIkVilDvV 113 (428)
T PLN00196 87 KYGNEAQLKSLIEAFHGKGVQVIADIV 113 (428)
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 467777899999999999999999977
No 454
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=29.82 E-value=1.8e+02 Score=23.06 Aligned_cols=53 Identities=15% Similarity=0.166 Sum_probs=35.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHH----HHH-HHHHHcCC-EEEEeccch
Q 018401 178 YIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYE----RIR-KVCNKQKA-IMLADMAHI 230 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~----~I~-~la~~~g~-~vivD~a~~ 230 (356)
..+++.|.+.+.+.++..|+++ |-| .|...+.. +.+ +|.+++++ +..+||-.+
T Consensus 34 ~~~~~~l~~~i~~~~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~T 94 (130)
T TIGR00250 34 EPDWSRIEELLKEWTPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLS 94 (130)
T ss_pred cHHHHHHHHHHHHcCCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 3568889998888789999998 777 67665522 222 33344565 577888754
No 455
>PRK06806 fructose-bisphosphate aldolase; Provisional
Probab=29.30 E-value=1.9e+02 Score=26.43 Aligned_cols=51 Identities=8% Similarity=0.240 Sum_probs=38.9
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCC---CcccHHHHHHHHHHcCCEEEEeccch
Q 018401 179 IDYDQLEKSATLFRPKLIVAGASAYA---RLYDYERIRKVCNKQKAIMLADMAHI 230 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~~~n~g---~~~~l~~I~~la~~~g~~vivD~a~~ 230 (356)
-|++.+++++.. ....|.+..++.+ .+.--.++.++|+++|+.+=.|..|-
T Consensus 85 ~~~e~i~~Al~~-G~tsVm~d~s~~~~~eni~~t~~v~~~a~~~gv~veaE~ghl 138 (281)
T PRK06806 85 MTFEKIKEALEI-GFTSVMFDGSHLPLEENIQKTKEIVELAKQYGATVEAEIGRV 138 (281)
T ss_pred CCHHHHHHHHHc-CCCEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeE
Confidence 488999999986 7788888766644 22235588999999999987787764
No 456
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=29.11 E-value=80 Score=24.93 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=21.6
Q ss_pred HHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 184 LEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 184 l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
+++.+.. ++-+|+++-.. .+.+.+.++|++++++++.=
T Consensus 74 l~~l~~~-~~P~iIvt~~~----~~p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 74 LEKLFSY-NPPCIIVTRGL----EPPPELIELAEKYNIPLLRT 111 (127)
T ss_dssp HHHHCTT-T-S-EEEETTT-------HHHHHHHHHCT--EEEE
T ss_pred HHHHhCC-CCCEEEEECcC----CCCHHHHHHHHHhCCcEEEc
Confidence 4445554 67777776322 46789999999999987754
No 457
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=28.83 E-value=1.4e+02 Score=28.99 Aligned_cols=45 Identities=9% Similarity=0.053 Sum_probs=30.9
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEE
Q 018401 180 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 224 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vi 224 (356)
++.++++.+...-..++.+.++..|.+.+..+++++|+++|+.++
T Consensus 317 ~~~~~~~~i~~~a~d~v~ik~~~iGGItea~~ia~lA~~~Gi~~v 361 (425)
T TIGR01060 317 NTEILREGIEMGVANSILIKPNQIGTLTETLDAVELAKKAGYTAV 361 (425)
T ss_pred CHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEE
Confidence 466666666553345665556667778888888888988888644
No 458
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=28.78 E-value=2e+02 Score=23.11 Aligned_cols=53 Identities=19% Similarity=0.222 Sum_probs=34.9
Q ss_pred CCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc----HHHHHH-HHHHcCC-EEEEeccchh
Q 018401 179 IDYDQLEKSATLFRPKLIVAG-ASA-YARLYD----YERIRK-VCNKQKA-IMLADMAHIS 231 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~----l~~I~~-la~~~g~-~vivD~a~~~ 231 (356)
.+++.|.+.+.+.++..|+++ |-+ .|...+ +.+.++ +.++.++ +..+||-.+.
T Consensus 41 ~~~~~l~~~i~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~TT 101 (138)
T PRK00109 41 PDWDRLEKLIKEWQPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERLST 101 (138)
T ss_pred hHHHHHHHHHHHhCCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 468889888888789999998 766 675544 222222 3333455 5778987653
No 459
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=28.59 E-value=78 Score=28.53 Aligned_cols=45 Identities=20% Similarity=0.254 Sum_probs=32.3
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCC----CcccHHHHHHHHHHcCCEEEEec
Q 018401 180 DYDQLEKSATLFRPKLIVAGASAYA----RLYDYERIRKVCNKQKAIMLADM 227 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~~~n~g----~~~~l~~I~~la~~~g~~vivD~ 227 (356)
+.+.+++.+. |..++++.|- .| ..-.+++|.+++++.++++++|+
T Consensus 91 av~~i~k~L~--RlhavVIGPG-LGRdp~~~k~i~~iley~~~~dvP~VIDa 139 (306)
T KOG3974|consen 91 AVDIIEKLLQ--RLHAVVIGPG-LGRDPAILKEIAKILEYLRGKDVPLVIDA 139 (306)
T ss_pred hHhHHHHHHh--heeEEEECCC-CCCCHHHHHHHHHHHHHHhcCCCcEEEcC
Confidence 4555566554 6778888743 33 33357889999999999999996
No 460
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=28.38 E-value=2.7e+02 Score=21.15 Aligned_cols=52 Identities=8% Similarity=0.038 Sum_probs=35.1
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHc--CCEEEEeccchh
Q 018401 180 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ--KAIMLADMAHIS 231 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~--g~~vivD~a~~~ 231 (356)
..+++.+.+.+.++++|.++.+.......++.+.++.+++ ++.+++=+.|..
T Consensus 38 ~~~~~~~~i~~~~pdiV~iS~~~~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~t 91 (125)
T cd02065 38 PPEEIVEAAKEEDADVVGLSALSTTHMEAMKLVIEALKELGIDIPVVVGGAHPT 91 (125)
T ss_pred CHHHHHHHHHHcCCCEEEEecchHhHHHHHHHHHHHHHhcCCCCeEEEeCCcCC
Confidence 4566666666568999999754433444566777777777 488888776544
No 461
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=28.19 E-value=51 Score=23.97 Aligned_cols=20 Identities=25% Similarity=0.326 Sum_probs=17.9
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 018401 209 YERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 209 l~~I~~la~~~g~~vivD~a 228 (356)
-++|.++|+++|++++.|..
T Consensus 29 A~~I~~~A~e~~VPi~~~~~ 48 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPD 48 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 56899999999999999965
No 462
>PRK06683 hypothetical protein; Provisional
Probab=27.96 E-value=1.5e+02 Score=21.49 Aligned_cols=44 Identities=7% Similarity=-0.132 Sum_probs=29.9
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEec
Q 018401 182 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 227 (356)
Q Consensus 182 ~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~ 227 (356)
.+..+++...+.++|++.. +.+ ..-.+.|.++|+.++++++.-.
T Consensus 17 ~~v~kaik~gkaklViiA~-Da~-~~~~~~i~~~~~~~~Vpv~~~~ 60 (82)
T PRK06683 17 KRTLEAIKNGIVKEVVIAE-DAD-MRLTHVIIRTALQHNIPITKVE 60 (82)
T ss_pred HHHHHHHHcCCeeEEEEEC-CCC-HHHHHHHHHHHHhcCCCEEEEC
Confidence 4556677766788888852 222 1136788999999999876544
No 463
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=27.62 E-value=5.8e+02 Score=24.81 Aligned_cols=56 Identities=18% Similarity=0.330 Sum_probs=32.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCC
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 240 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~ 240 (356)
.+.++++...+.+ .++|+.+.+..-.+.+.+.+.+..+...-++++|-+ +|-++.+
T Consensus 226 ~~~l~el~~~l~~--~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDia-----vPRdie~ 281 (414)
T COG0373 226 AVALEELLEALAE--ADVVISSTSAPHPIITREMVERALKIRKRLLIVDIA-----VPRDVEP 281 (414)
T ss_pred eecHHHHHHhhhh--CCEEEEecCCCccccCHHHHHHHHhcccCeEEEEec-----CCCCCCc
Confidence 3467777777764 677776533222233444554444332229999987 6766543
No 464
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=27.57 E-value=1e+02 Score=22.97 Aligned_cols=70 Identities=11% Similarity=0.093 Sum_probs=38.2
Q ss_pred cEEEEcCCCCCCcccH-HHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCC--cCCCCCceEEEEec
Q 018401 194 KLIVAGASAYARLYDY-ERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHK--SLRGPRGAMIFFRK 269 (356)
Q Consensus 194 k~v~l~~~n~g~~~~l-~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K--~l~gp~gG~l~~~~ 269 (356)
|.+++|.+-.|+-.=+ .+|.++++++|+.+-+|..+ .+.... ...++|+++.|.|= .|...+.|.++.-.
T Consensus 3 KIL~aCG~GvgSS~~ik~kve~~l~~~gi~~~~~~~~-v~~~~~-----~~~~aDiiv~s~~l~~~~~~~~~~~v~~~~ 75 (93)
T COG3414 3 KILAACGNGVGSSTMIKMKVEEVLKELGIDVDVEQCA-VDEIKA-----LTDGADIIVTSTKLADEFEDIPKGYVVITG 75 (93)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHHcCCCceeeeEE-eccccc-----CCCcccEEEEehHhhhhcCcCCCceEEEEc
Confidence 5666665445533333 47888999999984444432 222221 12248999988643 34222225555433
No 465
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=27.56 E-value=1.4e+02 Score=26.86 Aligned_cols=55 Identities=5% Similarity=0.156 Sum_probs=33.7
Q ss_pred CCCCHHHHHHHh----hhcCCcEEEEc-CCCCC---CcccHHHHHHHHHHcCCEEEEeccchhh
Q 018401 177 GYIDYDQLEKSA----TLFRPKLIVAG-ASAYA---RLYDYERIRKVCNKQKAIMLADMAHISG 232 (356)
Q Consensus 177 ~~~d~~~l~~~i----~~~~~k~v~l~-~~n~g---~~~~l~~I~~la~~~g~~vivD~a~~~g 232 (356)
....+++...++ ...+.+++++. ...+| .+.|+..|.-+ ++.+.+||+|.+|++.
T Consensus 125 ~~~t~~e~l~aaeyi~~~Gn~~viLcERG~tf~y~r~~~D~~~ip~~-k~~~~PVi~DpSHsvq 187 (258)
T TIGR01362 125 QFLSPWDMKNVVEKVLSTGNKNILLCERGTSFGYNNLVVDMRSLPIM-RELGCPVIFDATHSVQ 187 (258)
T ss_pred CcCCHHHHHHHHHHHHHcCCCcEEEEeCCCCcCCCCcccchhhhHHH-HhcCCCEEEeCCcccc
Confidence 345666654332 33356666664 33333 35677777655 4458999999999743
No 466
>PLN03244 alpha-amylase; Provisional
Probab=27.34 E-value=62 Score=34.01 Aligned_cols=29 Identities=21% Similarity=0.402 Sum_probs=26.2
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEEeccc
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLADMAH 229 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~vivD~a~ 229 (356)
+.+|...+++.+++.||+.|+-||.|-++
T Consensus 435 sRYGTPeDLK~LVD~aH~~GI~VILDvV~ 463 (872)
T PLN03244 435 SRYGTPDDFKRLVDEAHGLGLLVFLDIVH 463 (872)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEecC
Confidence 33889999999999999999999999886
No 467
>PRK05583 ribosomal protein L7Ae family protein; Provisional
Probab=27.04 E-value=1.7e+02 Score=22.21 Aligned_cols=44 Identities=16% Similarity=0.283 Sum_probs=29.4
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
.+.+++++...+.++|++. ++. ...-.++|.+.|+.+++.++.-
T Consensus 22 ~~~v~~aik~gk~~lVI~A-~D~-s~~~kkki~~~~~~~~vp~~~~ 65 (104)
T PRK05583 22 YNKCEEAIKKKKVYLIIIS-NDI-SENSKNKFKNYCNKYNIPYIEG 65 (104)
T ss_pred HHHHHHHHHcCCceEEEEe-CCC-CHhHHHHHHHHHHHcCCCEEEe
Confidence 4566777776677888774 222 2223678888999888887554
No 468
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=26.96 E-value=1.6e+02 Score=26.89 Aligned_cols=55 Identities=13% Similarity=0.216 Sum_probs=32.6
Q ss_pred CCCHHHHHHHh----hhcCCcEEEEc-CCCCC---CcccHHHHHHHHHH-cCCEEEEeccchhh
Q 018401 178 YIDYDQLEKSA----TLFRPKLIVAG-ASAYA---RLYDYERIRKVCNK-QKAIMLADMAHISG 232 (356)
Q Consensus 178 ~~d~~~l~~~i----~~~~~k~v~l~-~~n~g---~~~~l~~I~~la~~-~g~~vivD~a~~~g 232 (356)
.+.+++...+. ...+.+++++. ...+| .+.|+..|..+-+. .+.+||+|.+|++.
T Consensus 140 f~s~~e~~~aae~i~~~Gn~~vilcERG~~fgy~~~~~D~~~ip~mk~~~t~lPVi~DpSHsvq 203 (281)
T PRK12457 140 FMSPTQMKHVVSKCREAGNDRVILCERGSSFGYDNLVVDMLGFRQMKRTTGDLPVIFDVTHSLQ 203 (281)
T ss_pred cCCHHHHHHHHHHHHHcCCCeEEEEeCCCCCCCCCcccchHHHHHHHhhCCCCCEEEeCCcccc
Confidence 45555554333 23355666664 32223 45577777655443 39999999999743
No 469
>cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase.
Probab=26.66 E-value=1.6e+02 Score=25.62 Aligned_cols=49 Identities=8% Similarity=0.046 Sum_probs=37.1
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
..+.+++.+.+.....+++.+.++..|-+.+..+++++|+++|+.+..=
T Consensus 154 ~~~~~~~~~~~~~~~~d~~~~k~~~~GGi~~~~~i~~~a~~~gi~~~~~ 202 (229)
T cd00308 154 VTTVDDALEALELGAVDILQIKPTRVGGLTESRRAADLAEAFGIRVMVH 202 (229)
T ss_pred CCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 4567777776665346676666666777888999999999999987764
No 470
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=26.54 E-value=2.6e+02 Score=21.41 Aligned_cols=54 Identities=13% Similarity=0.106 Sum_probs=36.3
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE-eccchhhh
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA-DMAHISGL 233 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv-D~a~~~g~ 233 (356)
.++.++|+..+.. ++.+++++.-.++.. +-.++.+.++++|+-+-+ |-..+...
T Consensus 39 ~l~~e~l~~l~~~-~peiliiGTG~~~~~-~~~~~~~~l~~~gi~vE~m~T~~AcrT 93 (109)
T cd05560 39 DLTAAHFEALLAL-QPEVILLGTGERQRF-PPPALLAPLLARGIGVEVMDTQAACRT 93 (109)
T ss_pred cCCHHHHHHHHhc-CCCEEEEecCCCCCc-CCHHHHHHHHHcCCeEEEECHHHHHHH
Confidence 6788999988876 789888873334433 347777888889986544 44433433
No 471
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=26.08 E-value=1.7e+02 Score=22.43 Aligned_cols=47 Identities=9% Similarity=-0.053 Sum_probs=26.8
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEE
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIML 224 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vi 224 (356)
+.++.+++.++-.. ..|-|+.. +.+ .+.....+++.+.|++.|+-.+
T Consensus 13 ~Q~~~~d~~~la~~-GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~ 61 (110)
T PF04273_consen 13 GQPSPEDLAQLAAQ-GFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYV 61 (110)
T ss_dssp CS--HHHHHHHHHC-T--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEE
T ss_pred CCCCHHHHHHHHHC-CCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEE
Confidence 47788898876554 77877776 554 3344456778889999997544
No 472
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=25.96 E-value=4.4e+02 Score=24.55 Aligned_cols=95 Identities=14% Similarity=-0.006 Sum_probs=52.3
Q ss_pred cccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc
Q 018401 112 WGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 191 (356)
Q Consensus 112 v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~ 191 (356)
|+||+++--.-......+++.|-.|++.+.-..++..... ....++ + .....|-+.|.+.+.++
T Consensus 3 iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~--------~~~~~f--~------~gDi~D~~~L~~vf~~~ 66 (329)
T COG1087 3 VLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALL--------KLQFKF--Y------EGDLLDRALLTAVFEEN 66 (329)
T ss_pred EEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhh--------hccCce--E------EeccccHHHHHHHHHhc
Confidence 4455544433333667778899888877744444422111 000111 1 12345888899999887
Q ss_pred CCcEEEEc-CC-CCC--Cccc----------HHHHHHHHHHcCCE
Q 018401 192 RPKLIVAG-AS-AYA--RLYD----------YERIRKVCNKQKAI 222 (356)
Q Consensus 192 ~~k~v~l~-~~-n~g--~~~~----------l~~I~~la~~~g~~ 222 (356)
++..|+-- .. ..| ...| --.|.+.++++|+.
T Consensus 67 ~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~ 111 (329)
T COG1087 67 KIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK 111 (329)
T ss_pred CCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCC
Confidence 88877642 11 133 2223 23677888888874
No 473
>PRK00077 eno enolase; Provisional
Probab=25.95 E-value=1.9e+02 Score=28.13 Aligned_cols=45 Identities=9% Similarity=0.048 Sum_probs=31.4
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEE
Q 018401 180 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 224 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vi 224 (356)
++.++++.+...-..++.+.++..|.+.+.-+++++|+++|+.++
T Consensus 316 ~~~~~~~~i~~~a~d~v~ik~~~~GGitea~~ia~lA~~~gi~~~ 360 (425)
T PRK00077 316 NTKRLKKGIEKGAANSILIKVNQIGTLTETLDAIELAKRAGYTAV 360 (425)
T ss_pred CHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEE
Confidence 466666666553455666656667778888888888888888554
No 474
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=25.82 E-value=1.6e+02 Score=26.57 Aligned_cols=56 Identities=9% Similarity=0.084 Sum_probs=37.5
Q ss_pred CCHHHHHHH----hhhcCCcEEEEc-----CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhc
Q 018401 179 IDYDQLEKS----ATLFRPKLIVAG-----ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLV 234 (356)
Q Consensus 179 ~d~~~l~~~----i~~~~~k~v~l~-----~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~ 234 (356)
-.++++..+ +...+..+|++. .-. |....|+..+..+-+....++|+|-+|+.|--
T Consensus 163 aTieEwL~AAEYI~s~GN~~vILCERGIRtfe~~TRntLDi~aV~~~kq~THLPVivDpSH~~Grr 228 (286)
T COG2876 163 ATIEEWLNAAEYILSHGNGNVILCERGIRTFEKATRNTLDISAVPILKQETHLPVIVDPSHATGRR 228 (286)
T ss_pred ccHHHHHHHHHHHHhCCCCcEEEEecccccccccccceechHHHHHHHhhcCCCEEECCCCcccch
Confidence 345554432 233356666652 111 45677899998888888999999999988854
No 475
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=25.78 E-value=1.7e+02 Score=21.90 Aligned_cols=43 Identities=16% Similarity=0.097 Sum_probs=29.6
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
..+..+++.+.+.++|++. ++.+. .-.+.+..+|++++++++.
T Consensus 21 ~~~v~kai~~gkaklViiA-~D~~~-~~~~~i~~~c~~~~Ip~~~ 63 (99)
T PRK01018 21 SKRTIKAIKLGKAKLVIVA-SNCPK-DIKEDIEYYAKLSGIPVYE 63 (99)
T ss_pred HHHHHHHHHcCCceEEEEe-CCCCH-HHHHHHHHHHHHcCCCEEE
Confidence 3456677776578888885 22332 2357888999999998755
No 476
>PRK07714 hypothetical protein; Provisional
Probab=25.47 E-value=1.9e+02 Score=21.62 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=29.4
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
.+..++++...+.++|++. ++.+ ..-.+++..+|+.++++++.-
T Consensus 23 ~~~v~~al~~g~~~lViiA-~D~s-~~~~~ki~~~~~~~~vp~~~~ 66 (100)
T PRK07714 23 EELVLKEVRSGKAKLVLLS-EDAS-VNTTKKITDKCTYYNVPMRKV 66 (100)
T ss_pred HHHHHHHHHhCCceEEEEe-CCCC-HHHHHHHHHHHHhcCCCEEEe
Confidence 4566777776577887774 2222 223678888899999987643
No 477
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=25.45 E-value=1.2e+02 Score=26.04 Aligned_cols=34 Identities=3% Similarity=0.148 Sum_probs=27.0
Q ss_pred CCcEEEEcCCC-CCCcccHHHHHHHHHHcCCEEEE
Q 018401 192 RPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 192 ~~k~v~l~~~n-~g~~~~l~~I~~la~~~g~~viv 225 (356)
.+..|++.--| .|.....+++.++|++||+.++.
T Consensus 156 ~Pa~VicEi~~~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 156 KPAGVICEIMNDDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCcEEEEEEeCCCccccChHHHHHHHHHcCCcEEE
Confidence 56666665444 78888999999999999998774
No 478
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=25.28 E-value=2.1e+02 Score=28.41 Aligned_cols=92 Identities=17% Similarity=0.163 Sum_probs=56.1
Q ss_pred CCCCHHHHHHHhhh----cCCcEEEEc---CCCCCCcccHHHHHHHHHHcC-CEEEEeccchhhhcccCCCCCCCC----
Q 018401 177 GYIDYDQLEKSATL----FRPKLIVAG---ASAYARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIPSPFE---- 244 (356)
Q Consensus 177 ~~~d~~~l~~~i~~----~~~k~v~l~---~~n~g~~~~l~~I~~la~~~g-~~vivD~a~~~g~~~~~~~~~~l~---- 244 (356)
+++|.-.+++.+.+ .++-++++. .+-.|....+-+|.++|++|. .|++.-+ |+..+....-..+.+.
T Consensus 272 griDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakfWLHasG-haiAALt~aepnnil~HV~e 350 (838)
T KOG0630|consen 272 GRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKFWLHASG-HAIAALTCAEPNNILGHVEE 350 (838)
T ss_pred ccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeecc-chhhheeecCcccchhHHHH
Confidence 47899888888754 245566654 333688888999999999996 7777654 4433222111111111
Q ss_pred CccEEEeCCCCcCCCCCceEEEEec
Q 018401 245 YADVVTTTTHKSLRGPRGAMIFFRK 269 (356)
Q Consensus 245 ~~D~~~~s~~K~l~gp~gG~l~~~~ 269 (356)
..|.++....-||+-|..-++..++
T Consensus 351 qldSMal~ialWLGiPSaPiV~LHR 375 (838)
T KOG0630|consen 351 QLDSMALNIALWLGIPSAPIVLLHR 375 (838)
T ss_pred HHhhccchhHHHhCCCCCceEEeec
Confidence 2567777766777666554444444
No 479
>TIGR03586 PseI pseudaminic acid synthase.
Probab=25.14 E-value=1.9e+02 Score=27.03 Aligned_cols=55 Identities=16% Similarity=0.302 Sum_probs=37.1
Q ss_pred CCCCHHHHHHHhh---h-cCCcEEEE-cCCCCC---CcccHHHHHHHHHHcCCEE-EEeccchhhh
Q 018401 177 GYIDYDQLEKSAT---L-FRPKLIVA-GASAYA---RLYDYERIRKVCNKQKAIM-LADMAHISGL 233 (356)
Q Consensus 177 ~~~d~~~l~~~i~---~-~~~k~v~l-~~~n~g---~~~~l~~I~~la~~~g~~v-ivD~a~~~g~ 233 (356)
+.-++++++.++. + ...+++++ |.++++ ...++..|..+.++++.+| ++| |+.|.
T Consensus 142 G~~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~ 205 (327)
T TIGR03586 142 GIATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGI 205 (327)
T ss_pred CCCCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCch
Confidence 4457888777653 2 12356655 355554 4557889998888899988 888 87774
No 480
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=25.13 E-value=14 Score=31.13 Aligned_cols=44 Identities=14% Similarity=0.063 Sum_probs=29.2
Q ss_pred HHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCC--EEEEeccchh
Q 018401 184 LEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKA--IMLADMAHIS 231 (356)
Q Consensus 184 l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~--~vivD~a~~~ 231 (356)
|++++.. +...+++- +|.+..++++.+.++++|- +|++|-..+.
T Consensus 12 l~~al~s-~~~~vfLl---~g~I~~l~~~v~~~~~~gK~vfVHiDli~Gl 57 (175)
T PF04309_consen 12 LEKALES-DVEVVFLL---TGDIGNLKDIVKRLKAAGKKVFVHIDLIEGL 57 (175)
T ss_dssp CCCCCCS-SSSEEEE----SEECCCHHHHHHHHHHTT-EEEEECCGEETB
T ss_pred HHHHHcC-CCCEEEEE---cCcHHHHHHHHHHHHHcCCEEEEEehhcCCC
Confidence 3445544 56777764 3567789999999999974 5667766543
No 481
>TIGR03677 rpl7ae 50S ribosomal protein L7Ae. Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, box H/ACA, box C/D and box C'/D' sRNAs. Interacts with protein L15e.
Probab=25.10 E-value=1.8e+02 Score=22.65 Aligned_cols=46 Identities=11% Similarity=0.071 Sum_probs=30.1
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEec
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 227 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~ 227 (356)
..+..+++.+.+.++|++. ++.....-.+.+..+|++++++++.-.
T Consensus 31 ~~~v~kaikkgka~LVilA-~D~s~~~~~~~i~~lc~~~~Ip~~~~~ 76 (117)
T TIGR03677 31 TNEVTKAVERGIAKLVVIA-EDVEPPEIVAHLPALCEEKGIPYVYVK 76 (117)
T ss_pred HHHHHHHHHcCCccEEEEe-CCCCcHHHHHHHHHHHHHcCCCEEEeC
Confidence 4566777776578888885 222211124788889999999866544
No 482
>cd03320 OSBS o-Succinylbenzoate synthase (OSBS) catalyzes the conversion of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 4-(2'-carboxyphenyl)-4-oxobutyrate (o-succinylbenzoate or OSB), a reaction in the menaquinone biosynthetic pathway. Menaquinone is an essential cofactor for anaerobic growth in eubacteria and some archaea. OSBS belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=25.04 E-value=1.1e+02 Score=27.37 Aligned_cols=49 Identities=6% Similarity=-0.105 Sum_probs=37.3
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
..++.++.+.+.....+++.+.+...|-+....+++++|+++|+.+.+-
T Consensus 185 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~ 233 (263)
T cd03320 185 LRRLDDPLALAAAGALGALVLKPALLGGPRALLELAEEARARGIPAVVS 233 (263)
T ss_pred cccccCHHHHHhcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCCEEEE
Confidence 3456667777765456777777777787888999999999999987664
No 483
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=24.89 E-value=3e+02 Score=25.84 Aligned_cols=23 Identities=13% Similarity=0.062 Sum_probs=19.3
Q ss_pred cHHHHHHHHHHcCCEEEEeccch
Q 018401 208 DYERIRKVCNKQKAIMLADMAHI 230 (356)
Q Consensus 208 ~l~~I~~la~~~g~~vivD~a~~ 230 (356)
....+.++|+++|+.+|+.+.+.
T Consensus 148 ~~~~l~~~A~~~gi~~Il~G~~~ 170 (343)
T TIGR03573 148 IFASVYQVALKFNIPLIIWGENI 170 (343)
T ss_pred HHHHHHHHHHHhCCCEEEeCCCH
Confidence 46678899999999999998764
No 484
>PRK10785 maltodextrin glucosidase; Provisional
Probab=24.86 E-value=67 Score=32.81 Aligned_cols=49 Identities=12% Similarity=0.124 Sum_probs=33.7
Q ss_pred CHHHHHHHhh---hcCCcEEEEcC-----CC--------------CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 180 DYDQLEKSAT---LFRPKLIVAGA-----SA--------------YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 180 d~~~l~~~i~---~~~~k~v~l~~-----~n--------------~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
|++.+.+.|. +-.+.+|.++| ++ .|...+++++++.||++|+-||+|.+
T Consensus 177 Dl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V 247 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGV 247 (598)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 6666655542 33566777752 11 23445688999999999999999987
No 485
>PTZ00106 60S ribosomal protein L30; Provisional
Probab=24.69 E-value=1.6e+02 Score=22.62 Aligned_cols=43 Identities=12% Similarity=-0.027 Sum_probs=29.0
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 182 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 182 ~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
++..+++...+.++|++. ++.+ ..-.+++...|+.++++++..
T Consensus 31 ~~vlkalk~gkaklViiA-~D~~-~~~kkki~~~~~~~~Vpv~~~ 73 (108)
T PTZ00106 31 KSTLKALRNGKAKLVIIS-NNCP-PIRRSEIEYYAMLSKTGVHHY 73 (108)
T ss_pred HHHHHHHHcCCeeEEEEe-CCCC-HHHHHHHHHHHhhcCCCEEEe
Confidence 455666765578888874 2222 223678888999999998763
No 486
>PLN00191 enolase
Probab=24.55 E-value=2.1e+02 Score=28.25 Aligned_cols=47 Identities=4% Similarity=-0.034 Sum_probs=32.8
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 179 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
.+++++++.+...-...+.+-.+..|.+.+..+++++|+++|+.+++
T Consensus 347 tn~~~l~~~I~~~aad~i~iKl~qiGGITea~~~a~lA~~~G~~~~i 393 (457)
T PLN00191 347 TNPKRVAKAIQEKACNALLLKVNQIGTVTESIEAVKMSKAAGWGVMT 393 (457)
T ss_pred CCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHCCCEEEe
Confidence 34666666665533455555566678788888888999999988776
No 487
>TIGR01928 menC_lowGC/arch o-succinylbenzoic acid (OSB) synthetase. This model describes the enzyme o-succinylbenzoic acid synthetase (menC) that is involved in one of the steps of the menaquinone biosynthesis pathway. It takes SHCHC and makes it into 2-succinylbenzoate. Included in this model are low GC gram positive bacteria and archaea. Also included in the seed and in the model are enzymes with the com-name of N-acylamino acid racemase (or the more general term, racemase / racemase family), which refers to the enzyme's industrial application as racemases, and not to its biological function as o-succinylbenzoic acid synthetase.
Probab=24.55 E-value=1.9e+02 Score=26.83 Aligned_cols=50 Identities=14% Similarity=0.160 Sum_probs=38.4
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...++.++.+.+...-+.++.+.++..|-+.+..+++++|+++|+.++.-
T Consensus 231 s~~~~~~~~~~~~~~~~dvi~~d~~~~GGit~~~~~~~~A~~~gi~~~~~ 280 (324)
T TIGR01928 231 SITSLDDARNLIELGNVKVINIKPGRLGGLTEVQKAIETCREHGAKVWIG 280 (324)
T ss_pred CcCCHHHHHHHHHcCCCCEEEeCcchhcCHHHHHHHHHHHHHcCCeEEEc
Confidence 34577788887765446677776777787888999999999999988764
No 488
>PLN02361 alpha-amylase
Probab=24.49 E-value=75 Score=30.69 Aligned_cols=27 Identities=15% Similarity=0.176 Sum_probs=24.0
Q ss_pred CCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 202 AYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 202 n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.+|...+++++++.||++|+-+|.|.+
T Consensus 71 ~~Gt~~el~~li~~~h~~gi~vi~D~V 97 (401)
T PLN02361 71 AYGSEHLLKSLLRKMKQYNVRAMADIV 97 (401)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEEEc
Confidence 367778899999999999999999977
No 489
>PRK04175 rpl7ae 50S ribosomal protein L7Ae; Validated
Probab=24.46 E-value=2e+02 Score=22.57 Aligned_cols=47 Identities=13% Similarity=0.060 Sum_probs=30.4
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.++..+++.+.+.++|++.. +.....-.+.+..+|+++++.++.-+.
T Consensus 35 ~~~v~kaikkgkakLVilA~-D~s~~~i~~~~~~lc~~~~Vp~~~~~t 81 (122)
T PRK04175 35 TNETTKAVERGIAKLVVIAE-DVDPEEIVAHLPLLCEEKKIPYVYVPS 81 (122)
T ss_pred HHHHHHHHHcCCccEEEEeC-CCChHHHHHHHHHHHHHcCCCEEEECC
Confidence 45666777765678888852 221111146888999999998766543
No 490
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=24.22 E-value=1.4e+02 Score=26.80 Aligned_cols=45 Identities=13% Similarity=0.154 Sum_probs=31.1
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.+.+++.+. +.++++++++ .|...++.++.+.+++++..+++|..
T Consensus 83 ~~~~~~~~~--~~davvig~G-l~~~~~~~~l~~~~~~~~~pvVlDa~ 127 (272)
T TIGR00196 83 VDEDEELLE--RYDVVVIGPG-LGQDPSFKKAVEEVLELDKPVVLDAD 127 (272)
T ss_pred HHHHHhhhc--cCCEEEEcCC-CCCCHHHHHHHHHHHhcCCCEEEEhH
Confidence 455555443 4678888744 33333478888889999999999964
No 491
>PLN03033 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=24.15 E-value=2.4e+02 Score=25.83 Aligned_cols=54 Identities=15% Similarity=0.264 Sum_probs=33.7
Q ss_pred CCCCHHHHHHHhh----hcCCcEEEEc-CCCCC---CcccHHHHHHHHHHcCCEEEEeccchh
Q 018401 177 GYIDYDQLEKSAT----LFRPKLIVAG-ASAYA---RLYDYERIRKVCNKQKAIMLADMAHIS 231 (356)
Q Consensus 177 ~~~d~~~l~~~i~----~~~~k~v~l~-~~n~g---~~~~l~~I~~la~~~g~~vivD~a~~~ 231 (356)
...++++...+.. ..+.+++++. ...+| .+.|+..+.-+ ++.+.+||+|.+|++
T Consensus 139 q~~t~~e~~~aaeki~~~GN~~viLcERG~tFgy~~lv~D~r~ip~m-k~~~lPVI~DpSHsv 200 (290)
T PLN03033 139 QFCAPSVMRNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWM-REANCPVVADITHSL 200 (290)
T ss_pred CCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCcCCCCcccchhhhHHH-HhcCCCEEEeCCccc
Confidence 4567776654432 2345666664 33333 44577776655 468999999999973
No 492
>TIGR01502 B_methylAsp_ase methylaspartate ammonia-lyase. This model describes methylaspartate ammonia-lyase, also called beta-methylaspartase (EC 4.3.1.2). It follows methylaspartate mutase (composed of S and E subunits) in one of several possible pathways of glutamate fermentation.
Probab=24.12 E-value=2.1e+02 Score=27.73 Aligned_cols=52 Identities=4% Similarity=-0.053 Sum_probs=41.3
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEec
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 227 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~ 227 (356)
+...+++++++.+...-..+|-+-.+..|-+.+..+|.++|+++|+.+.+-+
T Consensus 304 Es~~t~~d~~~~i~~~a~d~v~iK~~k~GGIt~a~kia~lA~~~Gi~~~~g~ 355 (408)
T TIGR01502 304 EWCNTVEDVKFFTDAKAGHMVQIKTPDVGGVNNIARAIMYCKANGMGAYVGG 355 (408)
T ss_pred CCCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEEeC
Confidence 3456789999988764566776666667888899999999999999888743
No 493
>TIGR01927 menC_gamma/gm+ o-succinylbenzoic acid (OSB) synthetase. This model describes the enzyme o-succinylbenzoic acid synthetase (menC) that is involved in one of the steps of the menaquinone biosynthesis pathway. It takes SHCHC and makes it into 2-succinylbenzoate. Included in this model are gamma proteobacteria and archaea. Many of the com-names of the proteins identified by the model are identified as O-succinylbenzoyl-CoA synthase in error.
Probab=23.87 E-value=1.6e+02 Score=27.13 Aligned_cols=49 Identities=6% Similarity=-0.048 Sum_probs=38.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
..+..++.+.+...-.++|.+.++..|-+....+++++|+++|+.+++-
T Consensus 215 ~~~~~d~~~~~~~~~~d~i~ik~~~~GGi~~~~~i~~~a~~~gi~~~~~ 263 (307)
T TIGR01927 215 LWELPQLADEYGPGWRGALVIKPAIIGSPAKLRDLAQKAHRLGLQAVFS 263 (307)
T ss_pred cCChHHHHHHHhcCCCceEEECchhcCCHHHHHHHHHHHHHcCCCEEEE
Confidence 4567888888865335677777777887888999999999999988875
No 494
>PTZ00081 enolase; Provisional
Probab=23.81 E-value=2.2e+02 Score=27.93 Aligned_cols=46 Identities=7% Similarity=0.026 Sum_probs=30.0
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 180 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
+++.+.+.+...-...+.+-++..|.+.+.-+++++|+++|+.+++
T Consensus 336 n~~~l~~~I~~~aad~i~iKvnqiGGITe~l~~a~lA~~~Gi~~ii 381 (439)
T PTZ00081 336 NPTRIKKAIEKKACNALLLKVNQIGTVTEAIEAAKLAQKNGWGVMV 381 (439)
T ss_pred CHHHHHHHHHhCCCCEEEeccccccCHHHHHHHHHHHHHcCCcEEE
Confidence 3555555554423345555555567777888888999999877666
No 495
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=23.79 E-value=3.5e+02 Score=23.36 Aligned_cols=88 Identities=3% Similarity=0.010 Sum_probs=47.2
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc----CCcEEEEcC
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF----RPKLIVAGA 200 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~----~~k~v~l~~ 200 (356)
.....-..|-+|++..+....-+...... ...|.+...+.++ +-.++.+.+... .+..|++..
T Consensus 24 r~~~~~~~g~~v~vfkp~iD~R~~~~~V~-----Sr~G~~~~A~~i~--------~~~~i~~~i~~~~~~~~~~~v~IDE 90 (201)
T COG1435 24 RARRYKEAGMKVLVFKPAIDTRYGVGKVS-----SRIGLSSEAVVIP--------SDTDIFDEIAALHEKPPVDCVLIDE 90 (201)
T ss_pred HHHHHHHcCCeEEEEecccccccccceee-----eccCCcccceecC--------ChHHHHHHHHhcccCCCcCEEEEeh
Confidence 45555567888888776555444333322 2233333333222 112233333221 256888875
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
...-...-+..+.+++.+.|+.|++
T Consensus 91 aQF~~~~~v~~l~~lad~lgi~Vi~ 115 (201)
T COG1435 91 AQFFDEELVYVLNELADRLGIPVIC 115 (201)
T ss_pred hHhCCHHHHHHHHHHHhhcCCEEEE
Confidence 5522223367788888889999997
No 496
>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).
Probab=23.79 E-value=1.5e+02 Score=27.72 Aligned_cols=50 Identities=4% Similarity=0.009 Sum_probs=38.6
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...+++++++.+.....++|.+.++..|-+.+..+++++|+++|+.+++=
T Consensus 248 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~i~~~a~~~g~~~~~~ 297 (357)
T cd03316 248 NLYTRWEFRDLLEAGAVDIIQPDVTKVGGITEAKKIAALAEAHGVRVAPH 297 (357)
T ss_pred ccccHHHHHHHHHhCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEecc
Confidence 34578888888876456676666666777888899999999999877654
No 497
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=23.78 E-value=3.1e+02 Score=24.49 Aligned_cols=22 Identities=14% Similarity=0.193 Sum_probs=11.0
Q ss_pred cHHHHHHHHHHcCCEEEEeccc
Q 018401 208 DYERIRKVCNKQKAIMLADMAH 229 (356)
Q Consensus 208 ~l~~I~~la~~~g~~vivD~a~ 229 (356)
++++.++++.+.+-+++.=++.
T Consensus 116 s~~~a~~~l~~~~~vllttGsk 137 (248)
T PRK08057 116 DIEEAAEALAPFRRVLLTTGRQ 137 (248)
T ss_pred CHHHHHHHhhccCCEEEecCcc
Confidence 4555555554444444444443
No 498
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=23.64 E-value=2.1e+02 Score=23.26 Aligned_cols=48 Identities=8% Similarity=0.056 Sum_probs=35.7
Q ss_pred HHHHHHhhhcCCcEEEE-c-CCC-CCCcccHHHHHHHHHHcCCEEEEeccc
Q 018401 182 DQLEKSATLFRPKLIVA-G-ASA-YARLYDYERIRKVCNKQKAIMLADMAH 229 (356)
Q Consensus 182 ~~l~~~i~~~~~k~v~l-~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~ 229 (356)
+++-+.+...+..+|++ - |-+ -+.-.|++.|.++|.-|++++-...+-
T Consensus 63 qQIga~Ia~g~id~vIFf~DPl~~~phepDi~aLlRlc~v~nIP~AtN~aT 113 (143)
T TIGR00160 63 QQIGALIAEGKIDAVIFFWDPLNAQPHEPDVKALLRLCTVWNIPLATNVAT 113 (143)
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCCCCcCHHHHHHHHHhhCcccccCHHH
Confidence 45566666657777665 3 434 567779999999999999999887663
No 499
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=23.61 E-value=1.7e+02 Score=25.09 Aligned_cols=34 Identities=6% Similarity=0.189 Sum_probs=25.5
Q ss_pred CCcEEEEc-CCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 192 RPKLIVAG-ASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 192 ~~k~v~l~-~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
++..+++. -+-.|...+.+++.+++++||+.++.
T Consensus 152 ~p~avi~eil~~dG~~~~~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 152 SPVAVICEILDDDGDMARRDELEEFAKKHGLPIVS 186 (194)
T ss_dssp -SBEEEEEBBETTSSBHCHHHHHHHHHHTT-EEEE
T ss_pred CCcEEEEEEeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 46666665 33388999999999999999988774
No 500
>PRK09505 malS alpha-amylase; Reviewed
Probab=23.52 E-value=78 Score=32.90 Aligned_cols=25 Identities=12% Similarity=0.143 Sum_probs=21.7
Q ss_pred CCcccHHHHHHHHHHcCCEEEEecc
Q 018401 204 ARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 204 g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
|...+++++++.||++|+-||+|.+
T Consensus 289 Gt~~dfk~Lv~~aH~~Gi~VilD~V 313 (683)
T PRK09505 289 GTEADLRTLVDEAHQRGIRILFDVV 313 (683)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4555789999999999999999977
Done!