Query 018401
Match_columns 356
No_of_seqs 298 out of 2989
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 14:41:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018401.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018401hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 2.5E-45 8.4E-50 344.6 24.8 296 24-319 32-331 (490)
2 1rv3_A Serine hydroxymethyltra 100.0 1.5E-39 5.2E-44 318.6 26.3 302 17-318 15-320 (483)
3 2a7v_A Serine hydroxymethyltra 100.0 1.7E-39 5.8E-44 316.7 24.0 294 25-318 33-330 (490)
4 3h7f_A Serine hydroxymethyltra 100.0 7.7E-33 2.6E-37 268.5 25.6 283 16-318 15-297 (447)
5 3n0l_A Serine hydroxymethyltra 100.0 1.4E-32 4.8E-37 263.3 25.0 272 26-317 5-276 (417)
6 3gbx_A Serine hydroxymethyltra 100.0 1.8E-31 6E-36 255.8 22.0 280 20-317 2-283 (420)
7 2vi8_A Serine hydroxymethyltra 100.0 1.7E-30 5.8E-35 247.9 25.3 273 26-318 3-275 (405)
8 3ecd_A Serine hydroxymethyltra 100.0 9.6E-31 3.3E-35 251.0 23.3 279 21-318 7-285 (425)
9 2dkj_A Serine hydroxymethyltra 100.0 2.4E-29 8.1E-34 240.1 25.0 271 29-318 6-276 (407)
10 3zrp_A Serine-pyruvate aminotr 99.9 5.9E-26 2E-30 214.4 18.0 245 49-318 4-261 (384)
11 3nnk_A Ureidoglycine-glyoxylat 99.9 1.7E-25 5.9E-30 213.4 20.4 248 48-319 14-286 (411)
12 3lvm_A Cysteine desulfurase; s 99.9 7.2E-26 2.5E-30 217.1 16.7 246 46-318 21-280 (423)
13 3isl_A Purine catabolism prote 99.9 3.3E-25 1.1E-29 211.8 21.2 248 48-319 12-286 (416)
14 2huf_A Alanine glyoxylate amin 99.9 6.1E-25 2.1E-29 208.5 20.2 247 48-318 20-278 (393)
15 2z9v_A Aspartate aminotransfer 99.9 4.3E-25 1.5E-29 209.5 19.0 242 53-318 15-265 (392)
16 3f0h_A Aminotransferase; RER07 99.9 3.2E-25 1.1E-29 209.2 17.9 256 47-327 19-281 (376)
17 4hvk_A Probable cysteine desul 99.9 1.2E-25 4E-30 211.9 14.8 237 53-318 7-252 (382)
18 1kmj_A Selenocysteine lyase; p 99.9 4E-25 1.4E-29 210.2 18.2 243 48-318 24-296 (406)
19 1vjo_A Alanine--glyoxylate ami 99.9 8.4E-25 2.9E-29 207.7 20.3 233 48-318 35-290 (393)
20 1iug_A Putative aspartate amin 99.9 1.6E-25 5.6E-30 209.1 14.7 242 49-319 3-249 (352)
21 2dr1_A PH1308 protein, 386AA l 99.9 7.9E-25 2.7E-29 207.0 19.5 244 49-318 22-275 (386)
22 3kgw_A Alanine-glyoxylate amin 99.9 1.1E-24 3.8E-29 206.3 19.1 247 48-318 24-282 (393)
23 1t3i_A Probable cysteine desul 99.9 6.9E-25 2.4E-29 209.7 16.8 241 48-318 29-300 (420)
24 2yrr_A Aminotransferase, class 99.9 5.5E-25 1.9E-29 205.3 15.7 242 49-318 2-250 (353)
25 4eb5_A Probable cysteine desul 99.9 4.2E-25 1.5E-29 208.5 15.0 235 55-318 9-252 (382)
26 3cai_A Possible aminotransfera 99.9 7.2E-25 2.5E-29 209.0 16.2 243 48-318 27-284 (406)
27 2ch1_A 3-hydroxykynurenine tra 99.9 2.9E-24 9.9E-29 204.1 20.2 247 48-318 19-277 (396)
28 3vax_A Putative uncharacterize 99.9 3.3E-25 1.1E-29 210.9 12.4 243 47-318 20-280 (400)
29 1elu_A L-cysteine/L-cystine C- 99.9 2.2E-24 7.4E-29 204.2 17.2 260 47-319 16-292 (390)
30 3f9t_A TDC, L-tyrosine decarbo 99.9 7.9E-24 2.7E-28 200.4 20.8 204 49-270 33-262 (397)
31 1eg5_A Aminotransferase; PLP-d 99.9 4.5E-24 1.5E-28 201.5 18.7 235 56-318 11-256 (384)
32 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.1E-24 3.7E-29 205.1 13.7 240 47-318 8-266 (371)
33 3e77_A Phosphoserine aminotran 99.9 2.2E-25 7.6E-30 210.3 8.3 258 53-336 19-285 (377)
34 2bkw_A Alanine-glyoxylate amin 99.9 1.4E-23 4.8E-28 198.3 20.5 246 47-318 5-276 (385)
35 1m32_A 2-aminoethylphosphonate 99.9 7.8E-24 2.7E-28 198.4 17.4 247 48-319 5-261 (366)
36 3e9k_A Kynureninase; kynurenin 99.9 4.3E-25 1.5E-29 214.9 8.8 230 93-332 112-364 (465)
37 3qm2_A Phosphoserine aminotran 99.9 5.7E-26 1.9E-30 215.3 1.7 262 47-333 27-297 (386)
38 1gd9_A Aspartate aminotransfer 99.9 1.6E-23 5.3E-28 198.8 17.3 258 25-315 5-280 (389)
39 3a9z_A Selenocysteine lyase; P 99.9 3.9E-24 1.3E-28 205.8 13.2 250 47-318 18-302 (432)
40 3m5u_A Phosphoserine aminotran 99.9 5.4E-24 1.9E-28 200.0 12.4 259 47-336 5-273 (361)
41 3ffr_A Phosphoserine aminotran 99.9 1.1E-23 3.8E-28 197.2 14.1 248 47-319 4-262 (362)
42 1o4s_A Aspartate aminotransfer 99.9 6.8E-23 2.3E-27 194.7 13.9 231 21-269 12-262 (389)
43 1v2d_A Glutamine aminotransfer 99.9 4.4E-23 1.5E-27 195.2 12.2 255 24-316 4-270 (381)
44 1u08_A Hypothetical aminotrans 99.9 1.2E-22 4E-27 192.6 15.0 259 24-316 9-284 (386)
45 3h14_A Aminotransferase, class 99.9 2.8E-22 9.6E-27 190.3 16.9 248 32-314 17-276 (391)
46 2o0r_A RV0858C (N-succinyldiam 99.9 8.8E-23 3E-27 195.2 13.4 229 24-269 4-249 (411)
47 3dzz_A Putative pyridoxal 5'-p 99.9 8.5E-23 2.9E-27 193.4 12.9 239 47-315 28-283 (391)
48 3ffh_A Histidinol-phosphate am 99.9 6.1E-22 2.1E-26 186.0 17.7 249 24-314 7-269 (363)
49 1yiz_A Kynurenine aminotransfe 99.9 3.9E-22 1.3E-26 191.7 16.7 261 24-315 16-302 (429)
50 1j32_A Aspartate aminotransfer 99.9 5.9E-22 2E-26 187.8 17.7 206 46-269 30-253 (388)
51 1b5p_A Protein (aspartate amin 99.9 4.4E-22 1.5E-26 188.8 16.6 227 24-269 5-250 (385)
52 2dgk_A GAD-beta, GADB, glutama 99.9 8.7E-22 3E-26 190.9 18.7 195 57-270 53-278 (452)
53 1qz9_A Kynureninase; kynurenin 99.9 2.5E-22 8.4E-27 192.1 14.5 249 48-318 29-300 (416)
54 3tqx_A 2-amino-3-ketobutyrate 99.9 2E-22 6.7E-27 191.5 13.2 233 48-316 45-293 (399)
55 3ly1_A Putative histidinol-pho 99.9 9E-22 3.1E-26 184.1 17.3 228 47-315 17-258 (354)
56 3kki_A CAI-1 autoinducer synth 99.9 3.5E-22 1.2E-26 190.9 14.7 255 28-319 24-306 (409)
57 2w8t_A SPT, serine palmitoyltr 99.9 6E-22 2E-26 190.6 16.2 234 48-318 66-313 (427)
58 3get_A Histidinol-phosphate am 99.9 2.8E-22 9.7E-27 188.4 13.6 228 46-315 30-272 (365)
59 3mad_A Sphingosine-1-phosphate 99.9 1.7E-21 5.9E-26 191.9 19.7 206 87-318 134-372 (514)
60 2z61_A Probable aspartate amin 99.9 7.4E-22 2.5E-26 186.0 16.3 229 46-315 29-269 (370)
61 3ke3_A Putative serine-pyruvat 99.9 7.4E-22 2.5E-26 187.1 16.2 225 89-326 32-277 (379)
62 4dq6_A Putative pyridoxal phos 99.9 5.1E-22 1.8E-26 188.1 14.6 252 30-315 17-287 (391)
63 3mc6_A Sphingosine-1-phosphate 99.9 5.5E-22 1.9E-26 194.5 15.2 232 59-318 77-340 (497)
64 2c0r_A PSAT, phosphoserine ami 99.9 2.3E-22 7.9E-27 188.9 11.7 244 48-318 5-257 (362)
65 3hbx_A GAD 1, glutamate decarb 99.9 1.5E-21 5.2E-26 191.7 17.8 197 56-270 66-293 (502)
66 3euc_A Histidinol-phosphate am 99.9 2.6E-21 8.8E-26 182.0 18.3 230 46-315 30-271 (367)
67 1fc4_A 2-amino-3-ketobutyrate 99.9 7.2E-22 2.5E-26 188.0 14.3 236 47-318 46-297 (401)
68 3fvs_A Kynurenine--oxoglutarat 99.9 5.3E-22 1.8E-26 190.2 13.3 262 23-315 6-294 (422)
69 3vp6_A Glutamate decarboxylase 99.9 3.4E-21 1.2E-25 189.6 19.1 174 86-270 129-332 (511)
70 3l8a_A METC, putative aminotra 99.9 5.6E-22 1.9E-26 190.4 13.1 241 46-316 61-318 (421)
71 1c7n_A Cystalysin; transferase 99.9 1E-21 3.5E-26 186.8 14.7 237 47-315 32-287 (399)
72 1xi9_A Putative transaminase; 99.9 5.4E-22 1.8E-26 189.5 12.6 206 46-269 38-263 (406)
73 3jtx_A Aminotransferase; NP_28 99.9 1.4E-21 4.7E-26 185.6 15.3 255 25-314 4-291 (396)
74 2gb3_A Aspartate aminotransfer 99.9 6.5E-22 2.2E-26 189.2 12.9 246 34-314 31-290 (409)
75 2dou_A Probable N-succinyldiam 99.9 9.1E-22 3.1E-26 185.8 13.5 253 30-315 4-277 (376)
76 2zc0_A Alanine glyoxylate tran 99.9 5.7E-21 1.9E-25 182.2 19.0 260 23-315 7-293 (407)
77 3hvy_A Cystathionine beta-lyas 99.9 1E-21 3.5E-26 188.4 13.8 226 29-269 15-261 (427)
78 3a2b_A Serine palmitoyltransfe 99.9 1.1E-21 3.9E-26 186.6 14.0 234 47-317 44-291 (398)
79 1bs0_A Protein (8-amino-7-oxon 99.9 3.4E-21 1.2E-25 182.3 16.9 234 47-318 40-285 (384)
80 3ele_A Amino transferase; RER0 99.9 3.5E-21 1.2E-25 183.1 16.3 210 46-270 35-265 (398)
81 2x5d_A Probable aminotransfera 99.9 2.4E-21 8.2E-26 185.3 15.2 261 23-315 10-292 (412)
82 3b46_A Aminotransferase BNA3; 99.9 1E-21 3.6E-26 190.1 12.6 255 30-316 33-323 (447)
83 3kax_A Aminotransferase, class 99.9 8.6E-22 2.9E-26 186.0 11.6 238 47-315 25-279 (383)
84 2o1b_A Aminotransferase, class 99.9 2.9E-22 1E-26 191.4 8.2 260 24-315 23-300 (404)
85 3e2y_A Kynurenine-oxoglutarate 99.9 9.3E-22 3.2E-26 187.7 11.3 259 26-315 4-287 (410)
86 3ju7_A Putative PLP-dependent 99.9 2.9E-21 9.9E-26 183.0 14.5 196 48-270 4-206 (377)
87 3p1t_A Putative histidinol-pho 99.9 7.5E-21 2.6E-25 176.5 17.0 223 45-315 15-243 (337)
88 3dr4_A Putative perosamine syn 99.9 3.8E-21 1.3E-25 182.5 15.2 197 47-270 23-221 (391)
89 1d2f_A MALY protein; aminotran 99.9 6E-21 2.1E-25 181.0 16.2 239 46-315 28-283 (390)
90 1b9h_A AHBA synthase, protein 99.9 8.9E-21 3.1E-25 179.7 17.3 186 59-270 16-203 (388)
91 1svv_A Threonine aldolase; str 99.9 4.7E-21 1.6E-25 179.1 15.2 203 46-270 13-231 (359)
92 1w23_A Phosphoserine aminotran 99.9 2.4E-22 8.1E-27 188.4 6.2 239 48-318 4-256 (360)
93 2z67_A O-phosphoseryl-tRNA(SEC 99.9 4.7E-22 1.6E-26 193.1 8.3 169 90-269 131-313 (456)
94 3i16_A Aluminum resistance pro 99.9 3.4E-21 1.2E-25 184.7 14.2 221 34-269 22-261 (427)
95 1o69_A Aminotransferase; struc 99.9 1.4E-20 4.8E-25 179.1 18.2 188 56-269 8-198 (394)
96 3ezs_A Aminotransferase ASPB; 99.9 1.3E-20 4.5E-25 177.6 17.2 249 31-315 5-278 (376)
97 3cq5_A Histidinol-phosphate am 99.9 4.1E-20 1.4E-24 174.2 20.4 233 48-315 32-276 (369)
98 3g0t_A Putative aminotransfera 99.8 1.2E-20 4E-25 181.7 16.5 209 46-270 44-277 (437)
99 3nra_A Aspartate aminotransfer 99.8 4.7E-21 1.6E-25 182.5 13.5 207 48-269 41-269 (407)
100 2jis_A Cysteine sulfinic acid 99.8 2E-20 7E-25 184.3 17.8 173 87-270 143-343 (515)
101 3fdb_A Beta C-S lyase, putativ 99.8 1.7E-20 5.9E-25 176.8 16.2 234 46-316 23-272 (377)
102 2fnu_A Aminotransferase; prote 99.8 7.9E-21 2.7E-25 178.8 13.2 185 54-268 7-195 (375)
103 2okj_A Glutamate decarboxylase 99.8 1.3E-19 4.4E-24 178.1 21.7 172 88-270 128-329 (504)
104 3jzl_A Putative cystathionine 99.8 1.3E-20 4.4E-25 180.1 14.1 198 59-269 31-244 (409)
105 3nyt_A Aminotransferase WBPE; 99.8 5E-21 1.7E-25 180.4 11.0 191 49-269 5-200 (367)
106 3dyd_A Tyrosine aminotransfera 99.8 1.8E-20 6.1E-25 180.3 14.4 240 47-315 55-316 (427)
107 1wyu_B Glycine dehydrogenase s 99.8 8.1E-20 2.8E-24 178.2 19.0 202 49-271 69-288 (474)
108 2aeu_A Hypothetical protein MJ 99.8 8E-20 2.7E-24 172.9 17.5 217 47-316 29-254 (374)
109 3frk_A QDTB; aminotransferase, 99.8 4.2E-21 1.4E-25 181.1 8.0 192 49-270 6-202 (373)
110 2oga_A Transaminase; PLP-depen 99.8 3.5E-20 1.2E-24 176.6 14.3 193 47-269 31-228 (399)
111 1vp4_A Aminotransferase, putat 99.8 1.6E-21 5.4E-26 187.5 5.0 260 23-316 21-307 (425)
112 1v72_A Aldolase; PLP-dependent 99.8 3.3E-20 1.1E-24 173.2 13.8 201 47-270 8-227 (356)
113 3aow_A Putative uncharacterize 99.8 2.2E-20 7.4E-25 181.0 12.8 233 19-269 50-304 (448)
114 3b8x_A WBDK, pyridoxamine 5-ph 99.8 1.7E-19 5.7E-24 171.3 18.6 192 49-269 4-204 (390)
115 3ht4_A Aluminum resistance pro 99.8 2.3E-20 7.7E-25 179.7 12.6 198 59-269 37-250 (431)
116 2x3l_A ORN/Lys/Arg decarboxyla 99.8 4.1E-21 1.4E-25 185.9 7.3 198 95-319 60-264 (446)
117 1bw0_A TAT, protein (tyrosine 99.8 2.9E-20 9.9E-25 177.9 12.7 241 47-315 34-305 (416)
118 2zyj_A Alpha-aminodipate amino 99.8 4.1E-21 1.4E-25 182.7 6.4 226 20-269 7-253 (397)
119 1e5e_A MGL, methionine gamma-l 99.8 4.6E-20 1.6E-24 176.3 13.2 156 95-269 65-226 (404)
120 4e1o_A HDC, histidine decarbox 99.8 4.4E-20 1.5E-24 180.4 13.2 194 59-270 92-325 (481)
121 2qma_A Diaminobutyrate-pyruvat 99.8 9.4E-20 3.2E-24 178.8 15.6 198 56-270 110-341 (497)
122 3uwc_A Nucleotide-sugar aminot 99.8 2.6E-20 9E-25 175.4 11.1 190 48-269 8-202 (374)
123 2c81_A Glutamine-2-deoxy-scyll 99.8 7E-20 2.4E-24 175.5 14.2 194 56-269 12-206 (418)
124 3hdo_A Histidinol-phosphate am 99.8 1.4E-19 4.7E-24 169.9 15.6 224 47-315 27-259 (360)
125 2rfv_A Methionine gamma-lyase; 99.8 5.4E-20 1.8E-24 175.3 12.9 192 92-316 64-261 (398)
126 3tcm_A Alanine aminotransferas 99.8 2.8E-19 9.5E-24 175.6 18.3 241 45-314 94-366 (500)
127 1c4k_A Protein (ornithine deca 99.8 2.3E-20 8E-25 189.6 10.7 210 95-318 176-414 (730)
128 1js3_A DDC;, DOPA decarboxylas 99.8 5.3E-20 1.8E-24 180.0 12.9 193 59-270 87-319 (486)
129 1lc5_A COBD, L-threonine-O-3-p 99.8 2.6E-19 8.8E-24 168.3 17.1 225 47-315 25-262 (364)
130 1gc0_A Methionine gamma-lyase; 99.8 6.1E-20 2.1E-24 175.0 12.6 158 93-269 66-228 (398)
131 2vyc_A Biodegradative arginine 99.8 9.7E-20 3.3E-24 186.4 14.8 205 95-319 208-441 (755)
132 3op7_A Aminotransferase class 99.8 1E-19 3.5E-24 171.6 13.4 194 97-316 68-270 (375)
133 3k40_A Aromatic-L-amino-acid d 99.8 5.7E-20 2E-24 179.3 11.9 174 85-270 106-318 (475)
134 1mdo_A ARNB aminotransferase; 99.8 1.5E-19 5.1E-24 171.4 13.7 191 47-269 9-202 (393)
135 3if2_A Aminotransferase; YP_26 99.8 7E-20 2.4E-24 176.7 11.6 219 46-269 31-291 (444)
136 1pff_A Methionine gamma-lyase; 99.8 1.5E-19 5.1E-24 167.6 13.3 189 96-316 2-196 (331)
137 3ftb_A Histidinol-phosphate am 99.8 4.8E-19 1.6E-23 165.9 16.7 223 46-314 26-260 (361)
138 1iay_A ACC synthase 2, 1-amino 99.8 3.9E-19 1.3E-23 170.8 16.5 243 47-314 37-313 (428)
139 3qgu_A LL-diaminopimelate amin 99.8 3E-19 1E-23 172.6 13.3 203 47-270 70-299 (449)
140 1jg8_A L-ALLO-threonine aldola 99.8 2.3E-19 7.8E-24 167.3 11.8 200 47-269 4-217 (347)
141 2r2n_A Kynurenine/alpha-aminoa 99.8 1.3E-18 4.3E-23 167.2 17.2 258 19-316 3-310 (425)
142 1fg7_A Histidinol phosphate am 99.8 2.6E-19 8.8E-24 168.1 11.9 219 47-315 30-259 (356)
143 3piu_A 1-aminocyclopropane-1-c 99.8 9.4E-19 3.2E-23 168.5 16.1 212 48-269 40-289 (435)
144 2bwn_A 5-aminolevulinate synth 99.8 5.7E-19 1.9E-23 168.0 14.2 231 49-318 49-297 (401)
145 3rq1_A Aminotransferase class 99.8 2E-18 7E-23 165.2 17.9 223 27-267 14-276 (418)
146 3ei9_A LL-diaminopimelate amin 99.8 5.5E-19 1.9E-23 169.9 13.8 230 23-270 26-287 (432)
147 3n75_A LDC, lysine decarboxyla 99.8 1.6E-19 5.5E-24 182.1 10.3 197 96-318 199-418 (715)
148 2fq6_A Cystathionine beta-lyas 99.8 3.3E-19 1.1E-23 170.8 11.7 158 94-270 84-248 (415)
149 1qgn_A Protein (cystathionine 99.8 8.1E-19 2.8E-23 169.4 14.3 158 93-269 115-278 (445)
150 1s0a_A Adenosylmethionine-8-am 99.8 7.6E-18 2.6E-22 161.9 20.7 248 47-319 44-330 (429)
151 2po3_A 4-dehydrase; external a 99.8 1.2E-18 4.2E-23 167.2 14.7 191 50-269 20-214 (424)
152 1vef_A Acetylornithine/acetyl- 99.8 2E-18 6.8E-23 163.9 15.9 236 47-318 46-303 (395)
153 2cb1_A O-acetyl homoserine sul 99.8 2.6E-18 8.8E-23 164.5 16.6 157 94-269 58-218 (412)
154 4f4e_A Aromatic-amino-acid ami 99.8 9.5E-19 3.3E-23 167.8 13.6 228 24-267 25-283 (420)
155 3b1d_A Betac-S lyase; HET: PLP 99.7 1.2E-20 4.2E-25 179.2 0.0 237 47-315 32-287 (392)
156 3asa_A LL-diaminopimelate amin 99.8 1.7E-18 5.7E-23 164.9 14.8 240 47-316 34-292 (400)
157 3ruy_A Ornithine aminotransfer 99.8 1.2E-18 4.2E-23 165.2 13.7 234 47-318 37-301 (392)
158 3ihj_A Alanine aminotransferas 99.8 1.9E-18 6.6E-23 169.4 15.5 197 58-267 102-331 (498)
159 1cs1_A CGS, protein (cystathio 99.8 1E-18 3.5E-23 165.7 13.0 157 94-269 54-215 (386)
160 2fyf_A PSAT, phosphoserine ami 99.8 7.8E-19 2.7E-23 167.1 11.9 240 47-319 40-293 (398)
161 3qhx_A Cystathionine gamma-syn 99.8 9.1E-19 3.1E-23 166.7 12.3 157 94-269 68-229 (392)
162 3ndn_A O-succinylhomoserine su 99.8 7.7E-19 2.6E-23 168.3 11.8 159 93-270 82-245 (414)
163 1ibj_A CBL, cystathionine beta 99.8 1.7E-18 5.8E-23 168.2 13.8 198 47-269 90-295 (464)
164 2eh6_A Acoat, acetylornithine 99.8 4.7E-18 1.6E-22 160.0 15.7 233 48-317 30-289 (375)
165 1n8p_A Cystathionine gamma-lya 99.8 8.5E-19 2.9E-23 166.9 10.3 155 94-269 57-220 (393)
166 2x5f_A Aspartate_tyrosine_phen 99.8 1E-18 3.4E-23 168.0 10.5 239 46-314 47-324 (430)
167 3t18_A Aminotransferase class 99.8 3.3E-18 1.1E-22 163.5 14.0 221 29-267 15-275 (413)
168 3ez1_A Aminotransferase MOCR f 99.8 1.5E-18 5.2E-23 166.3 11.6 223 25-269 5-268 (423)
169 1yaa_A Aspartate aminotransfer 99.8 3.7E-18 1.3E-22 163.0 14.1 264 25-316 6-313 (412)
170 3cog_A Cystathionine gamma-lya 99.8 2.2E-18 7.6E-23 164.6 12.4 155 95-269 70-230 (403)
171 3g7q_A Valine-pyruvate aminotr 99.8 7.4E-19 2.5E-23 167.9 8.8 227 33-269 16-265 (417)
172 3pj0_A LMO0305 protein; struct 99.8 1.4E-18 4.7E-23 162.7 10.3 197 47-269 14-222 (359)
173 1uu1_A Histidinol-phosphate am 99.8 3.7E-18 1.3E-22 158.6 13.2 216 47-315 20-247 (335)
174 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 1.5E-17 5.1E-22 160.4 16.8 191 49-270 34-235 (437)
175 1wyu_A Glycine dehydrogenase ( 99.8 3.6E-18 1.2E-22 164.8 12.0 166 88-271 104-278 (438)
176 3fsl_A Aromatic-amino-acid ami 99.8 5.4E-18 1.8E-22 160.8 13.0 206 47-268 27-262 (397)
177 2eo5_A 419AA long hypothetical 99.7 3.1E-17 1.1E-21 157.3 17.7 241 47-318 43-329 (419)
178 3acz_A Methionine gamma-lyase; 99.7 5.9E-18 2E-22 160.8 12.1 157 94-269 61-222 (389)
179 1ajs_A Aspartate aminotransfer 99.7 1.8E-17 6.2E-22 158.2 15.4 227 23-267 5-272 (412)
180 2ez2_A Beta-tyrosinase, tyrosi 99.7 2.9E-17 1E-21 158.9 16.8 193 49-269 45-271 (456)
181 3ri6_A O-acetylhomoserine sulf 99.7 4.3E-18 1.5E-22 163.7 10.7 157 94-269 84-245 (430)
182 2q7w_A Aspartate aminotransfer 99.7 1.7E-17 5.9E-22 157.3 14.7 204 46-267 26-260 (396)
183 3d6k_A Putative aminotransfera 99.7 3.4E-18 1.2E-22 164.0 9.5 225 24-269 11-273 (422)
184 3fkd_A L-threonine-O-3-phospha 99.7 2.7E-17 9.1E-22 153.6 15.1 219 46-316 15-243 (350)
185 3ppl_A Aspartate aminotransfer 99.7 6E-18 2.1E-22 162.5 10.8 223 26-269 14-275 (427)
186 2ay1_A Aroat, aromatic amino a 99.7 1.8E-17 6.2E-22 157.2 13.7 202 47-267 27-257 (394)
187 3dxv_A Alpha-amino-epsilon-cap 99.7 4E-17 1.4E-21 157.3 16.2 242 47-319 44-319 (439)
188 3n5m_A Adenosylmethionine-8-am 99.7 3.7E-16 1.3E-20 151.2 22.7 253 48-327 51-349 (452)
189 2ctz_A O-acetyl-L-homoserine s 99.7 1.9E-17 6.5E-22 159.0 13.5 157 94-268 60-221 (421)
190 7aat_A Aspartate aminotransfer 99.7 4.2E-17 1.4E-21 155.1 15.5 220 33-268 14-265 (401)
191 3nx3_A Acoat, acetylornithine 99.7 1E-16 3.4E-21 152.2 17.9 235 47-319 37-299 (395)
192 3lws_A Aromatic amino acid bet 99.7 1.5E-17 5.1E-22 155.6 11.9 197 50-269 14-220 (357)
193 3gju_A Putative aminotransfera 99.7 9.1E-17 3.1E-21 155.9 17.7 245 58-326 68-355 (460)
194 4adb_A Succinylornithine trans 99.7 3.2E-17 1.1E-21 156.0 14.0 222 58-318 56-301 (406)
195 1z7d_A Ornithine aminotransfer 99.7 1.4E-16 4.9E-21 153.4 18.6 224 58-319 82-332 (433)
196 3i4j_A Aminotransferase, class 99.7 8.1E-17 2.8E-21 154.7 16.2 237 58-319 46-316 (430)
197 1ax4_A Tryptophanase; tryptoph 99.7 3.9E-17 1.3E-21 158.5 14.0 187 60-268 55-279 (467)
198 2oat_A Ornithine aminotransfer 99.7 8E-17 2.7E-21 155.5 15.6 234 48-319 78-343 (439)
199 3l44_A Glutamate-1-semialdehyd 99.7 1.8E-16 6.2E-21 152.5 17.9 234 47-319 56-323 (434)
200 3a8u_X Omega-amino acid--pyruv 99.7 1.6E-16 5.5E-21 153.6 17.4 235 58-319 67-348 (449)
201 1sff_A 4-aminobutyrate aminotr 99.7 2E-16 6.9E-21 151.5 17.8 244 48-319 43-318 (426)
202 3f6t_A Aspartate aminotransfer 99.7 3.7E-17 1.3E-21 161.6 12.5 203 48-270 105-330 (533)
203 3meb_A Aspartate aminotransfer 99.7 3.7E-16 1.3E-20 151.1 18.4 215 32-265 34-289 (448)
204 4eu1_A Mitochondrial aspartate 99.7 8E-17 2.7E-21 153.7 13.5 230 21-269 14-276 (409)
205 3tfu_A Adenosylmethionine-8-am 99.7 1.5E-16 5.2E-21 154.3 15.6 247 47-319 76-359 (457)
206 3k7y_A Aspartate aminotransfer 99.7 4.9E-16 1.7E-20 148.3 18.5 225 25-267 6-263 (405)
207 4e77_A Glutamate-1-semialdehyd 99.7 5.5E-16 1.9E-20 148.9 18.9 234 47-319 54-321 (429)
208 1zod_A DGD, 2,2-dialkylglycine 99.7 1.5E-16 5.3E-21 152.8 14.6 234 58-319 60-324 (433)
209 4a6r_A Omega transaminase; tra 99.7 6.8E-17 2.3E-21 156.8 12.0 242 58-326 67-349 (459)
210 3i5t_A Aminotransferase; pyrid 99.7 1.6E-15 5.4E-20 147.9 21.7 235 58-319 71-349 (476)
211 3nmy_A Xometc, cystathionine g 99.7 8.8E-17 3E-21 153.3 12.4 156 95-269 70-231 (400)
212 3fq8_A Glutamate-1-semialdehyd 99.7 6E-16 2E-20 148.5 18.2 234 47-319 53-320 (427)
213 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 1.7E-17 6E-22 158.4 7.3 172 90-269 96-281 (450)
214 3dod_A Adenosylmethionine-8-am 99.7 6.7E-16 2.3E-20 149.3 18.4 234 58-319 61-338 (448)
215 2oqx_A Tryptophanase; lyase, p 99.7 4.9E-17 1.7E-21 157.8 10.2 190 60-270 53-281 (467)
216 3hmu_A Aminotransferase, class 99.7 7E-16 2.4E-20 150.2 18.2 242 58-326 72-352 (472)
217 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 1.1E-17 3.9E-22 158.1 5.3 166 96-270 121-300 (501)
218 2epj_A Glutamate-1-semialdehyd 99.7 9.5E-16 3.3E-20 147.5 16.8 234 47-319 57-324 (434)
219 2pb2_A Acetylornithine/succiny 99.7 3.7E-16 1.3E-20 149.8 13.3 233 47-318 58-319 (420)
220 3k28_A Glutamate-1-semialdehyd 99.7 7.1E-16 2.4E-20 148.2 15.0 232 47-317 54-319 (429)
221 2ord_A Acoat, acetylornithine 99.7 7E-16 2.4E-20 146.5 14.7 224 48-318 42-300 (397)
222 2e7u_A Glutamate-1-semialdehyd 99.7 2.5E-15 8.6E-20 144.1 17.5 234 47-318 53-318 (424)
223 2cy8_A D-phgat, D-phenylglycin 99.6 2E-15 6.7E-20 146.1 16.1 232 47-316 58-322 (453)
224 4ffc_A 4-aminobutyrate aminotr 99.6 3.3E-15 1.1E-19 144.7 17.4 244 58-327 81-352 (453)
225 2zy4_A L-aspartate beta-decarb 99.6 3E-16 1E-20 155.4 9.4 225 25-270 72-332 (546)
226 3oks_A 4-aminobutyrate transam 99.6 4.4E-15 1.5E-19 143.7 16.9 236 58-319 78-346 (451)
227 2cjg_A L-lysine-epsilon aminot 99.6 2.4E-15 8.1E-20 145.5 13.5 231 58-319 71-351 (449)
228 4ao9_A Beta-phenylalanine amin 99.6 4.8E-14 1.6E-18 135.8 15.2 231 58-328 104-350 (454)
229 2yky_A Beta-transaminase; tran 99.3 4.8E-16 1.6E-20 150.5 0.0 241 46-326 100-362 (465)
230 4h51_A Aspartate aminotransfer 99.5 5.7E-14 1.9E-18 134.4 11.6 236 17-270 15-282 (420)
231 1ohv_A 4-aminobutyrate aminotr 99.5 3.3E-13 1.1E-17 131.3 14.3 236 58-319 80-374 (472)
232 3bwn_A AT1G70560, L-tryptophan 99.4 9.8E-14 3.4E-18 131.7 8.0 222 47-316 23-266 (391)
233 2hox_A ALLIIN lyase 1; cystein 99.4 1.3E-13 4.3E-18 132.6 3.0 193 47-269 57-267 (427)
234 4atq_A 4-aminobutyrate transam 99.4 4.5E-11 1.5E-15 115.3 20.6 244 58-327 81-353 (456)
235 4e3q_A Pyruvate transaminase; 99.1 8.2E-10 2.8E-14 106.9 16.1 245 58-328 84-372 (473)
236 4a0g_A Adenosylmethionine-8-am 99.0 7.5E-09 2.6E-13 106.8 17.1 127 182-325 577-727 (831)
237 2yxb_A Coenzyme B12-dependent 44.0 30 0.001 27.4 4.8 48 178-225 55-105 (161)
238 4f6o_A Metacaspase-1; rossmann 42.9 36 0.0012 30.9 5.6 46 95-140 78-135 (350)
239 4gqr_A Pancreatic alpha-amylas 42.0 15 0.00051 34.5 3.2 28 201-228 71-98 (496)
240 3keo_A Redox-sensing transcrip 41.1 74 0.0025 26.5 7.0 44 181-229 137-181 (212)
241 2lbw_A H/ACA ribonucleoprotein 37.8 73 0.0025 23.8 5.9 52 181-233 25-77 (121)
242 1y80_A Predicted cobalamin bin 37.5 60 0.002 26.7 5.9 51 178-228 125-179 (210)
243 1nu0_A Hypothetical protein YQ 36.9 71 0.0024 24.6 5.8 53 177-229 38-98 (138)
244 3ghf_A Septum site-determining 36.8 54 0.0018 24.6 5.0 46 179-224 25-78 (120)
245 1ht6_A AMY1, alpha-amylase iso 36.3 24 0.0008 32.6 3.5 28 201-228 63-90 (405)
246 1xrs_B D-lysine 5,6-aminomutas 36.1 1.2E+02 0.004 26.2 7.6 51 178-228 166-223 (262)
247 1lwj_A 4-alpha-glucanotransfer 35.7 25 0.00084 32.8 3.5 26 203-228 66-91 (441)
248 3bh4_A Alpha-amylase; calcium, 35.5 25 0.00085 33.2 3.6 27 202-228 74-100 (483)
249 1iv0_A Hypothetical protein; r 35.0 81 0.0028 22.6 5.5 50 178-228 37-94 (98)
250 1ud2_A Amylase, alpha-amylase; 34.8 26 0.00089 33.1 3.6 27 202-228 76-102 (480)
251 1wpc_A Glucan 1,4-alpha-maltoh 34.6 26 0.00089 33.1 3.6 27 202-228 78-104 (485)
252 2rdx_A Mandelate racemase/muco 34.6 56 0.0019 29.7 5.7 50 177-226 245-294 (379)
253 1hvx_A Alpha-amylase; hydrolas 34.2 27 0.00091 33.4 3.6 28 201-228 76-103 (515)
254 1g94_A Alpha-amylase; beta-alp 34.2 24 0.00081 33.0 3.2 27 202-228 60-86 (448)
255 3i4k_A Muconate lactonizing en 33.6 74 0.0025 29.0 6.4 50 177-226 253-302 (383)
256 3j21_Z 50S ribosomal protein L 33.6 82 0.0028 22.4 5.4 43 181-225 20-62 (99)
257 3v7e_A Ribosome-associated pro 33.4 48 0.0017 22.8 3.9 44 181-226 16-59 (82)
258 1mxg_A Alpha amylase; hyperthe 32.5 30 0.001 32.2 3.6 28 201-228 81-108 (435)
259 2ab1_A Hypothetical protein; H 32.4 1.1E+02 0.0036 23.0 6.0 48 178-226 48-95 (122)
260 4aie_A Glucan 1,6-alpha-glucos 32.3 29 0.001 33.1 3.5 26 203-228 76-101 (549)
261 1sjd_A N-acylamino acid racema 32.3 63 0.0021 29.2 5.6 48 178-225 242-289 (368)
262 1gcy_A Glucan 1,4-alpha-maltot 32.1 32 0.0011 33.0 3.7 28 201-228 87-114 (527)
263 2guy_A Alpha-amylase A; (beta- 31.8 31 0.0011 32.5 3.5 28 201-228 92-119 (478)
264 1r0m_A N-acylamino acid racema 31.5 67 0.0023 29.1 5.7 48 178-225 248-295 (375)
265 3qvo_A NMRA family protein; st 31.0 1.8E+02 0.0061 23.8 8.0 92 111-221 25-117 (236)
266 4a18_G RPL30; ribosome, eukary 31.0 1.1E+02 0.0038 22.0 5.8 43 181-225 27-69 (104)
267 3q45_A Mandelate racemase/muco 31.0 69 0.0023 29.0 5.6 50 177-226 243-292 (368)
268 2ovl_A Putative racemase; stru 31.0 52 0.0018 29.8 4.8 50 177-226 250-299 (371)
269 3bzy_B ESCU; auto cleavage pro 30.9 27 0.00091 24.5 2.2 20 209-228 29-48 (83)
270 3u5e_c L32, RP73, YL38, 60S ri 30.4 1.1E+02 0.0037 22.1 5.6 42 181-224 27-68 (105)
271 3on1_A BH2414 protein; structu 30.3 83 0.0028 22.5 4.9 43 181-225 23-65 (101)
272 1w41_A 50S ribosomal protein L 30.2 94 0.0032 22.2 5.2 43 181-225 21-63 (101)
273 2xzm_U Ribosomal protein L7AE 30.1 1E+02 0.0034 23.3 5.5 52 181-233 29-81 (126)
274 3kts_A Glycerol uptake operon 30.0 61 0.0021 26.6 4.5 45 180-228 18-64 (192)
275 3cpq_A 50S ribosomal protein L 29.9 91 0.0031 22.7 5.2 42 181-224 26-67 (110)
276 3v7q_A Probable ribosomal prot 29.7 90 0.0031 22.4 5.0 44 181-226 24-67 (101)
277 1chr_A Chloromuconate cycloiso 29.4 85 0.0029 28.4 6.0 49 178-226 248-296 (370)
278 3u9i_A Mandelate racemase/muco 29.4 2.3E+02 0.0078 25.8 8.9 50 177-227 278-327 (393)
279 1wza_A Alpha-amylase A; hydrol 29.1 31 0.0011 32.6 3.0 26 203-228 78-103 (488)
280 1kko_A 3-methylaspartate ammon 28.9 74 0.0025 29.4 5.5 49 177-225 309-357 (413)
281 2fym_A Enolase; RNA degradosom 28.9 75 0.0026 29.6 5.6 48 178-225 320-367 (431)
282 1ccw_A Protein (glutamate muta 28.8 53 0.0018 25.1 3.8 49 179-227 41-92 (137)
283 1vhx_A Putative holliday junct 28.7 78 0.0027 24.7 4.8 54 177-230 40-101 (150)
284 2aaa_A Alpha-amylase; glycosid 28.6 35 0.0012 32.2 3.3 28 201-228 92-119 (484)
285 1kcz_A Beta-methylaspartase; b 28.0 83 0.0028 29.0 5.7 49 177-225 309-357 (413)
286 1wuf_A Hypothetical protein LI 28.0 86 0.0029 28.6 5.8 49 178-226 261-309 (393)
287 1tks_A 3,4-dihydroxy-2-butanon 27.9 87 0.003 25.9 5.1 34 192-225 159-194 (204)
288 2z1k_A (NEO)pullulanase; hydro 27.9 33 0.0011 32.3 2.9 26 203-228 93-118 (475)
289 3mio_A DHBP synthase, 3,4-dihy 27.5 1.1E+02 0.0038 25.3 5.7 34 192-225 158-194 (206)
290 2dh2_A 4F2 cell-surface antige 27.5 35 0.0012 31.7 3.0 26 203-228 78-103 (424)
291 1zja_A Trehalulose synthase; s 27.1 41 0.0014 32.5 3.5 26 203-228 76-101 (557)
292 3noy_A 4-hydroxy-3-methylbut-2 26.2 50 0.0017 29.9 3.6 50 177-227 91-140 (366)
293 2ale_A SNU13, NHP2/L7AE family 26.2 81 0.0028 24.1 4.4 44 181-225 37-80 (134)
294 3edf_A FSPCMD, cyclomaltodextr 26.2 43 0.0015 32.7 3.5 26 203-228 195-220 (601)
295 3dhu_A Alpha-amylase; structur 25.8 38 0.0013 31.5 3.0 26 203-228 80-105 (449)
296 1cyg_A Cyclodextrin glucanotra 25.6 44 0.0015 33.2 3.5 28 201-228 106-133 (680)
297 3t7y_A YOP proteins translocat 25.4 36 0.0012 24.6 2.1 20 209-228 44-63 (97)
298 1b93_A Protein (methylglyoxal 25.4 1.1E+02 0.0038 24.0 5.1 46 183-228 73-121 (152)
299 1qho_A Alpha-amylase; glycosid 25.3 45 0.0015 33.2 3.5 28 201-228 102-129 (686)
300 3dip_A Enolase; structural gen 25.2 1E+02 0.0035 28.4 5.8 50 177-226 273-322 (410)
301 1jae_A Alpha-amylase; glycosid 25.2 30 0.001 32.6 2.1 26 203-228 71-96 (471)
302 1d3c_A Cyclodextrin glycosyltr 25.2 45 0.0016 33.1 3.5 28 201-228 110-137 (686)
303 2qdd_A Mandelate racemase/muco 25.0 58 0.002 29.6 4.0 49 178-226 246-294 (378)
304 3iz5_f 60S ribosomal protein L 25.0 1.3E+02 0.0045 22.1 5.2 43 181-225 31-73 (112)
305 2vt1_B Surface presentation of 24.9 39 0.0013 24.2 2.2 20 209-228 29-48 (93)
306 3qtp_A Enolase 1; glycolysis, 24.9 1.2E+02 0.004 28.4 5.9 45 181-225 334-378 (441)
307 1j0h_A Neopullulanase; beta-al 24.8 47 0.0016 32.3 3.5 25 204-228 220-244 (588)
308 1m53_A Isomaltulose synthase; 24.6 40 0.0014 32.6 3.0 26 203-228 89-114 (570)
309 3aj7_A Oligo-1,6-glucosidase; 24.4 49 0.0017 32.2 3.5 26 203-228 84-109 (589)
310 2wc7_A Alpha amylase, catalyti 24.4 33 0.0011 32.5 2.2 26 203-228 99-124 (488)
311 2ps2_A Putative mandelate race 24.4 57 0.0019 29.5 3.8 50 177-226 247-296 (371)
312 2xw6_A MGS, methylglyoxal synt 24.3 88 0.003 24.0 4.2 46 183-228 65-113 (134)
313 2okt_A OSB synthetase, O-succi 24.3 78 0.0027 28.3 4.7 50 178-227 223-272 (342)
314 1uok_A Oligo-1,6-glucosidase; 24.3 41 0.0014 32.4 3.0 26 203-228 75-100 (558)
315 3bmv_A Cyclomaltodextrin gluca 24.2 49 0.0017 32.9 3.5 28 201-228 111-138 (683)
316 3c01_E Surface presentation of 24.2 39 0.0013 24.5 2.1 20 209-228 29-48 (98)
317 1vr6_A Phospho-2-dehydro-3-deo 24.1 87 0.003 28.3 4.9 55 179-233 224-288 (350)
318 1n8f_A DAHP synthetase; (beta/ 24.1 1.1E+02 0.0038 27.6 5.5 29 205-233 242-272 (350)
319 2pgw_A Muconate cycloisomerase 23.8 50 0.0017 30.1 3.3 51 177-227 249-299 (384)
320 2qgy_A Enolase from the enviro 23.7 71 0.0024 29.2 4.3 51 177-227 253-303 (391)
321 2p8b_A Mandelate racemase/muco 23.5 66 0.0022 29.1 4.0 49 178-226 246-294 (369)
322 3bc9_A AMYB, alpha amylase, ca 23.4 47 0.0016 32.5 3.2 26 203-228 205-230 (599)
323 2ze0_A Alpha-glucosidase; TIM 23.4 44 0.0015 32.2 2.9 26 203-228 75-100 (555)
324 3jva_A Dipeptide epimerase; en 23.4 65 0.0022 29.0 3.9 51 177-227 242-292 (354)
325 1wzl_A Alpha-amylase II; pullu 23.3 49 0.0017 32.1 3.3 25 204-228 217-241 (585)
326 1ua7_A Alpha-amylase; beta-alp 22.9 37 0.0013 31.4 2.3 26 203-228 71-96 (422)
327 1vmd_A MGS, methylglyoxal synt 22.9 1.5E+02 0.005 24.0 5.5 46 183-228 89-137 (178)
328 3igs_A N-acetylmannosamine-6-p 22.9 2.1E+02 0.0071 23.9 6.8 67 180-252 90-156 (232)
329 4aef_A Neopullulanase (alpha-a 22.9 45 0.0015 32.9 2.9 49 180-228 237-307 (645)
330 2zic_A Dextran glucosidase; TI 22.8 43 0.0015 32.2 2.7 25 204-228 76-100 (543)
331 1g57_A DHBP synthase, 3,4-dihy 22.8 1.5E+02 0.005 24.8 5.6 34 192-225 167-201 (217)
332 1rvk_A Isomerase/lactonizing e 22.7 54 0.0019 29.8 3.3 50 177-226 259-309 (382)
333 3q58_A N-acetylmannosamine-6-p 22.4 2.2E+02 0.0074 23.8 6.8 67 180-252 90-156 (229)
334 1g5a_A Amylosucrase; glycosylt 22.3 56 0.0019 32.1 3.5 26 203-228 159-184 (628)
335 1nu5_A Chloromuconate cycloiso 22.3 65 0.0022 29.1 3.7 50 177-226 247-296 (370)
336 3eez_A Putative mandelate race 22.0 69 0.0023 29.2 3.8 50 177-226 245-294 (378)
337 3ezx_A MMCP 1, monomethylamine 21.7 1.1E+02 0.0037 25.4 4.7 51 178-228 129-185 (215)
338 1zco_A 2-dehydro-3-deoxyphosph 21.7 1.2E+02 0.0042 26.0 5.2 55 179-233 141-205 (262)
339 2poz_A Putative dehydratase; o 21.6 59 0.002 29.7 3.3 48 178-225 259-306 (392)
340 2hzg_A Mandelate racemase/muco 21.6 72 0.0025 29.2 3.9 50 177-226 255-304 (401)
341 1snn_A DHBP synthase, 3,4-dihy 21.4 1.2E+02 0.0042 25.5 4.9 34 192-225 178-212 (227)
342 4e84_A D-beta-D-heptose 7-phos 21.2 1.9E+02 0.0063 25.8 6.6 37 192-228 186-222 (352)
343 2aif_A Ribosomal protein L7A; 21.2 1.2E+02 0.0041 23.1 4.5 44 181-225 46-89 (135)
344 1mdl_A Mandelate racemase; iso 21.1 47 0.0016 29.9 2.5 50 177-226 248-297 (359)
345 1w6t_A Enolase; bacterial infe 20.9 95 0.0033 29.0 4.6 48 178-225 332-379 (444)
346 1ea9_C Cyclomaltodextrinase; h 20.9 54 0.0019 31.8 3.0 25 204-228 216-240 (583)
347 4aee_A Alpha amylase, catalyti 20.9 52 0.0018 32.8 3.0 25 204-228 309-333 (696)
348 1xbi_A 50S ribosomal protein L 20.8 1.2E+02 0.0041 22.5 4.4 44 181-225 34-77 (120)
349 3czg_A Sucrose hydrolase; (alp 20.8 53 0.0018 32.4 3.0 25 204-228 153-177 (644)
350 3ozy_A Putative mandelate race 20.5 71 0.0024 29.2 3.6 49 178-226 256-304 (389)
351 4dxk_A Mandelate racemase / mu 20.3 92 0.0031 28.6 4.3 49 178-226 270-318 (400)
352 1tkk_A Similar to chloromucona 20.2 67 0.0023 29.0 3.3 48 178-225 247-294 (366)
353 1wue_A Mandelate racemase/muco 20.1 84 0.0029 28.6 4.0 49 178-226 261-309 (386)
354 2zc8_A N-acylamino acid racema 20.0 69 0.0024 28.9 3.4 48 178-225 241-288 (369)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=2.5e-45 Score=344.60 Aligned_cols=296 Identities=65% Similarity=1.087 Sum_probs=236.7
Q ss_pred cccccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHH
Q 018401 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (356)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~ 103 (356)
++.|+..||+++..+.++..+|+..|+|+++||++++.|++++...+.++|++|||+.|||+|++..+++|..++++.++
T Consensus 32 ~~~l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~ 111 (490)
T 3ou5_A 32 QESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE 111 (490)
T ss_dssp CCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHH
T ss_pred ccchhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcc--cc-CCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCC
Q 018401 104 AFRLDPEKW--GG-SLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 180 (356)
Q Consensus 104 ~~g~~~~~v--~v-~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 180 (356)
+||+++.+| -| +-||+.||.+++.++++|||+|+..+..|++|+++++......+.+.|..+..++|+++++++.+|
T Consensus 112 lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~ID 191 (490)
T 3ou5_A 112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLID 191 (490)
T ss_dssp HTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETTTTEEC
T ss_pred HhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCccc
Confidence 999998765 35 899999999999999999999999999999999988755444566778888889999998888999
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCC
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 260 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp 260 (356)
+|++++...+++||+|+++.|.++...|++++++||++.|+++++|.||.+|++..++.++|+.++|++++++||+|.||
T Consensus 192 yd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTLrGP 271 (490)
T 3ou5_A 192 YNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGA 271 (490)
T ss_dssp HHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTTCSC
T ss_pred HHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccccCC
Confidence 99999999888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEecCcchh-ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 261 RGAMIFFRKGVKEI-NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 261 ~gG~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+||+|+++++.... ...|....+++.++++...||+.+|.|..+.++|++.|+.+...+
T Consensus 272 rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p 331 (490)
T 3ou5_A 272 RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTP 331 (490)
T ss_dssp SCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSH
T ss_pred CceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhH
Confidence 99999999865332 223333344678899999999999999999999999999998765
No 2
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=100.00 E-value=1.5e-39 Score=318.56 Aligned_cols=302 Identities=62% Similarity=1.036 Sum_probs=252.4
Q ss_pred CCchhhhcccccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHH
Q 018401 17 VTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (356)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (356)
.++.+++++++..++++++..+.++.+.+.+.|+|+++++++|+.|++++.+.+.+.|.+|||+.++|++....+++++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~ 94 (483)
T 1rv3_A 15 SSHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETL 94 (483)
T ss_dssp TTHHHHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHH
T ss_pred hhHHHHHhhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHH
Confidence 45677888889999999999999988888899999999999999999999999988787889999999988889999999
Q ss_pred HHHHHHHHcCCCCCcc---ccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 97 CQKRALEAFRLDPEKW---GGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 97 ~~~~la~~~g~~~~~v---~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
+++++++++|++++++ +++++|++++.+++.++++|||+|++++++|++++.+++..++.++.+.|..++.++++++
T Consensus 95 ~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~ 174 (483)
T 1rv3_A 95 CQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVN 174 (483)
T ss_dssp HHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBC
T ss_pred HHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccc
Confidence 9999999999987541 3355666899988999999999999999999999999988777677888877777877777
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC
Q 018401 174 ESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~ 253 (356)
++++.+|+++|++++++.+||+|+++++|++.+.|+++|+++|+++|+++++|++|+.|.++.++...++.++|++++|+
T Consensus 175 ~~~~~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~ 254 (483)
T 1rv3_A 175 PDTGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTT 254 (483)
T ss_dssp TTTCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEES
T ss_pred cCCCcCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecC
Confidence 56688999999999984489999997777668889999999999999999999999999988777766555699999999
Q ss_pred CCcCCCCCceEEEEecCcchh-ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 254 HKSLRGPRGAMIFFRKGVKEI-NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 254 ~K~l~gp~gG~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
||+|.||+||++++++++... ..+|....|++.+.+....+++..|+++.+.++|+.+|++++.+
T Consensus 255 ~K~l~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~ 320 (483)
T 1rv3_A 255 HKTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMT 320 (483)
T ss_dssp SGGGCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTS
T ss_pred cccCCCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhC
Confidence 999999999999999864211 12233322345555555556777899999999999999998864
No 3
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=100.00 E-value=1.7e-39 Score=316.74 Aligned_cols=294 Identities=65% Similarity=1.098 Sum_probs=213.0
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~ 104 (356)
+.+..++|+++..+.++..+|.+.|+|++++|++++.|++++...+.+.|.+||+++++|+|+...+.+++.++++++++
T Consensus 33 ~~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l 112 (490)
T 2a7v_A 33 ESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEA 112 (490)
T ss_dssp CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHH
T ss_pred chhhhcCHHHHHHHHHHHHHHHcCceEECCCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999998889899999999999888889998999999999
Q ss_pred cCCCCCcc---ccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCH
Q 018401 105 FRLDPEKW---GGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 181 (356)
Q Consensus 105 ~g~~~~~v---~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~ 181 (356)
||++++++ ++++||+++|.+++.++++|||+|++++++|++++..++......+.+.|..++.++++++++++.+|+
T Consensus 113 ~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~ 192 (490)
T 2a7v_A 113 FDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDY 192 (490)
T ss_dssp TTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCH
T ss_pred cCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCH
Confidence 99987543 347799999999999999999999999999998876554322223445666666677777756789999
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCC
Q 018401 182 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR 261 (356)
Q Consensus 182 ~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~ 261 (356)
++|++++.+.++|+|+++.+++|...|+++|+++|++||+++++|++|++|.+..+..+.++.++|++++|+||+|+||+
T Consensus 193 d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp~ 272 (490)
T 2a7v_A 193 NQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGAR 272 (490)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSCS
T ss_pred HHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCcccc
Confidence 99999997658999988877788888999999999999999999999999987666555555579999999999999999
Q ss_pred ceEEEEecCcchhc-cCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 262 GAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 262 gG~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
||++++++++.... ..|....+++.++++...+++.+|+|+.+.++|+.+|++++.+
T Consensus 273 GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~ 330 (490)
T 2a7v_A 273 SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACT 330 (490)
T ss_dssp CEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHS
T ss_pred chheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhh
Confidence 99999988531110 0111122245666666667888899999999999999988864
No 4
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.7e-33 Score=268.48 Aligned_cols=283 Identities=46% Similarity=0.738 Sum_probs=223.8
Q ss_pred CCCchhhhcccccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHH
Q 018401 16 GVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAES 95 (356)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 95 (356)
.++-+..+.+.+..++++++..+.++.+.+.+.|+|.+++++++|.|++++.+.+.+.|..+|++.++|.+....+.+++
T Consensus 15 ~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~ 94 (447)
T 3h7f_A 15 QTQGPGSMSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVEN 94 (447)
T ss_dssp -----CGGGCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHH
T ss_pred hccCchhhHHHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHH
Confidence 34445677888999999999999988787889999999999999999999999987667778888888888877777776
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
.+++++++++|++... ++++||++++..++.++++|||+|++++++|++++..+. .+...|..+..++++++++
T Consensus 95 ~a~~~la~~~g~~~~~-v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~ 168 (447)
T 3h7f_A 95 LARDRAKALFGAEFAN-VQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGM-----RLNFSGKLYENGFYGVDPA 168 (447)
T ss_dssp HHHHHHHHHHTCSEEE-CCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHSSEEEEECCCTT
T ss_pred HHHHHHHHHcCCCceE-EEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhh-----hhhhcCCeeEEEEcCcCcc
Confidence 6669999999998642 337788999998999999999999999998887654333 2233444455566676655
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHK 255 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K 255 (356)
++.+|+++|++++.+.++++|+++.+++|...++++|+++|++||+++|+|++|+.|....+....++.++|++++|+||
T Consensus 169 ~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK 248 (447)
T 3h7f_A 169 THLIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHK 248 (447)
T ss_dssp TCSCCHHHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSG
T ss_pred cCCcCHHHHHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCc
Confidence 67899999999997558999998744556555999999999999999999999988876544443444568999999999
Q ss_pred cCCCCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 256 SLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 256 ~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
+|+||+||+++.++ ++.+.+.....++.+|+++...++|+.+|+..+.+
T Consensus 249 ~l~G~~gG~i~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~ 297 (447)
T 3h7f_A 249 TLGGGRSGLIVGKQ--------------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAAT 297 (447)
T ss_dssp GGCCCSCEEEEECG--------------GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTS
T ss_pred CCCCCCeEEEEECH--------------HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhC
Confidence 99999999999887 45555554445666788888888888888887654
No 5
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=1.4e-32 Score=263.29 Aligned_cols=272 Identities=48% Similarity=0.812 Sum_probs=211.9
Q ss_pred cccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHc
Q 018401 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 105 (356)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~ 105 (356)
.++.+++++++.+.++...+.+.++|.++++++++.|++++.+.+.+.+..+|++.++|.+....+.+++.+++++++++
T Consensus 5 ~~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 84 (417)
T 3n0l_A 5 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLF 84 (417)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCHHHHHHHHHHHHHHhcCeeeecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHh
Confidence 45778999999998877777889999999999999999999999866676778888888888888889888999999999
Q ss_pred CCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHH
Q 018401 106 RLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLE 185 (356)
Q Consensus 106 g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~ 185 (356)
|+++++++++ +|++++..++.++++|||+|++++++|.++..++.. +...|..+..++++.+ +++.+|+++|+
T Consensus 85 g~~~~~i~~~-sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~d~~~l~ 157 (417)
T 3n0l_A 85 NCKFANVQPN-SGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAK-----VSSSGKMYESCFYGVE-LDGRIDYEKVR 157 (417)
T ss_dssp TCSEEECCCS-SHHHHHHHHHHHHSCTTCEEEEECC---------------------CCSEEEEECCC-TTSSCCHHHHH
T ss_pred CCCCcceEec-cHHHHHHHHHHHhcCCCCEEEecccccccccchhhh-----hhhhcceeeeEeccCC-CCCCcCHHHHH
Confidence 9987765554 558999989999999999999999999877654442 2233444555666666 66789999999
Q ss_pred HHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCceEE
Q 018401 186 KSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 265 (356)
Q Consensus 186 ~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l 265 (356)
+++++.++++|+++.+|+|...|+++|.++|++||+++|+|++|+.|....+.....+.++|++++|+||+|+||+||++
T Consensus 158 ~~i~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~ 237 (417)
T 3n0l_A 158 EIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRGGII 237 (417)
T ss_dssp HHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCSCEEE
T ss_pred HHHHhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCCeeEE
Confidence 99984489999988666799999999999999999999999999888775544343444579999999999999999999
Q ss_pred EEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHh
Q 018401 266 FFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 317 (356)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~ 317 (356)
+++++ ++.+.+.....++..++++...++++.+++....
T Consensus 238 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~ 276 (417)
T 3n0l_A 238 MTNDE-------------ELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNL 276 (417)
T ss_dssp EESCH-------------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHT
T ss_pred EECCH-------------HHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHH
Confidence 98842 4555555444455567888888888888887754
No 6
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.98 E-value=1.8e-31 Score=255.75 Aligned_cols=280 Identities=47% Similarity=0.781 Sum_probs=199.9
Q ss_pred hhhhccc--ccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHH
Q 018401 20 PKQLNAP--LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (356)
Q Consensus 20 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 97 (356)
++||++. ++.++++++..+.++.+.+.+.+.+.+++++++|.|++++.+.+.+.+..++++.+++.+....+.+++.+
T Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (420)
T 3gbx_A 2 NAMLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLA 81 (420)
T ss_dssp CCBCTTTCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHH
T ss_pred chHHhhhcchhhcCHHHHHHHHHHHHhhhcceeeeccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHH
Confidence 3456666 78899999999988777777889999999999999999999998665666788777777666667777788
Q ss_pred HHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCC
Q 018401 98 QKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 177 (356)
Q Consensus 98 ~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 177 (356)
++++++++|+++++++ +++|++++..++.+++++||+|++..++|+++..++. .+...|..+..++++.+ +++
T Consensus 82 ~~~la~~~~~~~~~v~-~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~ 154 (420)
T 3gbx_A 82 IDRAKELFGADYANVQ-PHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGS-----PVNFSGKLYNIVPYGID-ESG 154 (420)
T ss_dssp HHHHHHHHTCSEEECC-CSSHHHHHHHHHHHHCCTTCEEEEEEEC-----------------CHHHHSEEEEEEEC-TTC
T ss_pred HHHHHHHhCCCCceeE-ecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccch-----hhhhcccceeEEeccCC-ccC
Confidence 8999999999876554 4566889998999999999999999999988654444 22234444555666666 567
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcC
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 257 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l 257 (356)
.+|+++|++++++.++++|+++.+|+|...++++|.++|++||+++|+|++|+.|....+.....+..+|++++|+||++
T Consensus 155 ~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~ 234 (420)
T 3gbx_A 155 KIDYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTL 234 (420)
T ss_dssp SCCHHHHHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGG
T ss_pred CcCHHHHHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCC
Confidence 89999999999875799999986667888899999999999999999999998887654433333345899999999999
Q ss_pred CCCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHh
Q 018401 258 RGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 317 (356)
Q Consensus 258 ~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~ 317 (356)
+||.||+++.++.+. ++.+.+....+++..++++...++++..++..+.
T Consensus 235 ~g~~gg~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~ 283 (420)
T 3gbx_A 235 AGPRGGLILAKGGDE-----------ELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAM 283 (420)
T ss_dssp CSCSCEEEEESSCCH-----------HHHHHHHHHHC----CCCCHHHHHHHHHHHHHTT
T ss_pred CCCCceEEEEcCCcH-----------HHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHH
Confidence 899999999876210 3444444444455567888888888888876654
No 7
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.97 E-value=1.7e-30 Score=247.85 Aligned_cols=273 Identities=46% Similarity=0.807 Sum_probs=208.7
Q ss_pred cccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHc
Q 018401 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 105 (356)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~ 105 (356)
.+.++++.++..+.++.+.+.+.+.+.+++++.|+.|++++.+.+.+.+..+|++.+++.+.....++++.+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~ 82 (405)
T 2vi8_A 3 YLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF 82 (405)
T ss_dssp SHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhhCHHHHHHHHHHHHHhhcceeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh
Confidence 45678899999998877766677777788899999999999998864454456666666665667788888899999999
Q ss_pred CCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHH
Q 018401 106 RLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLE 185 (356)
Q Consensus 106 g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~ 185 (356)
|++++. +++++|++++..++.+++++||+|+++.++|+++...+. .+...|..+..++++++++++.+|+++|+
T Consensus 83 g~~~~~-i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~~l~ 156 (405)
T 2vi8_A 83 GAEHAN-VQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGS-----PVNFSGVQYNFVAYGVDPETHVIDYDDVR 156 (405)
T ss_dssp TCSEEE-CCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTC-----TTSHHHHHSEEEEECBCTTTCSBCHHHHH
T ss_pred CCCceE-EEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccc-----hhhhccceeEEEecccccccCCcCHHHHH
Confidence 998653 345566999998999999999999999988877754222 11233432344555554345789999999
Q ss_pred HHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCceEE
Q 018401 186 KSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 265 (356)
Q Consensus 186 ~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l 265 (356)
+++++.++++|+++++++|...++++|.++|++||+++|+|++|+.|..+.+....++..+|++++|+||+++||.||++
T Consensus 157 ~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~ 236 (405)
T 2vi8_A 157 EKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMI 236 (405)
T ss_dssp HHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSCEEE
T ss_pred HHHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCCeEE
Confidence 99975478999887777887778999999999999999999999987765554443333589999999999988888999
Q ss_pred EEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 266 FFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++++ ++.+.+.....++..|+++...++++.++++.+.+
T Consensus 237 ~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~ 275 (405)
T 2vi8_A 237 LCQE--------------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQ 275 (405)
T ss_dssp EECH--------------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHS
T ss_pred EEcH--------------HHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHh
Confidence 9886 45555544333445678888899998889987754
No 8
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=9.6e-31 Score=251.00 Aligned_cols=279 Identities=44% Similarity=0.690 Sum_probs=197.5
Q ss_pred hhhcccccccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHH
Q 018401 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (356)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 100 (356)
.++++.+..++++++..+.++...+.+.++|.+++++++|.|++++.+.+.+.+..++++.++|.+....+.+++.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 86 (425)
T 3ecd_A 7 PFFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIER 86 (425)
T ss_dssp HHHHCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHH
T ss_pred hHHHHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHH
Confidence 46788899999999999988777777889999999999999999999998766666777777776655445666667788
Q ss_pred HHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCC
Q 018401 101 ALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 180 (356)
Q Consensus 101 la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 180 (356)
+++++|++... ++++||++++..++.+++++||+|++.+++|.++...+. .....|..++.++++.+++++.+|
T Consensus 87 ~~~~~~~~~~~-v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d 160 (425)
T 3ecd_A 87 VKRLFNAGHAN-VQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGA-----KPALSGKWFNALQYGVSRDTMLID 160 (425)
T ss_dssp HHHHHTCSEEE-CCCSSHHHHHHHHHHHHCCTTCEEEEECC-----------------------CEEEEECCCTTTSSCC
T ss_pred HHHHhCCCCce-eecCchHHHHHHHHHHccCCCCEEEEcccccccceecch-----hhhhcccceeeeecCCCcccCccC
Confidence 99999987642 348889999998999999999999999998877432222 122345545556666665567899
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCC
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 260 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp 260 (356)
+++|++++.+.++++|+++.+++|...++++|.++|++||+++|+|++|+.|....+.....+..+|++++|+||+|+||
T Consensus 161 ~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~ 240 (425)
T 3ecd_A 161 YDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGP 240 (425)
T ss_dssp HHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCCC
T ss_pred HHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccCCC
Confidence 99999999755899999985566888999999999999999999999999887754433333334799999999999999
Q ss_pred CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 261 RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 261 ~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
+||+++.+++ .+.+.+.....++..++++...++++..|+..+.+
T Consensus 241 ~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~ 285 (425)
T 3ecd_A 241 RGGFVLTNDE-------------EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALT 285 (425)
T ss_dssp SCEEEEESCH-------------HHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTS
T ss_pred CcEEEEeCCH-------------HHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHH
Confidence 9999998753 34555544444555578888888888888766543
No 9
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.97 E-value=2.4e-29 Score=240.07 Aligned_cols=271 Identities=46% Similarity=0.784 Sum_probs=205.3
Q ss_pred ccChHHHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC
Q 018401 29 VVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD 108 (356)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~ 108 (356)
..++.++..+.++.+.+++.|++.++++++++.|++++.+.+.+.+..+|++..++.+......+++.+++++++++|++
T Consensus 6 ~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~ 85 (407)
T 2dkj_A 6 KRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAA 85 (407)
T ss_dssp CCCHHHHHHHHHHHHHHHTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS
T ss_pred ccCHHHHHHHHHHHHHhhcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 45689999999988777899999999999999999999998865344456655544454444566666788999999998
Q ss_pred CCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHh
Q 018401 109 PEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 188 (356)
Q Consensus 109 ~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i 188 (356)
++++ ++++|++++..++.+++++||+|++++++|+++..+.. .+...|..++.++++++++++.+|+++|++++
T Consensus 86 ~~~i-~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l 159 (407)
T 2dkj_A 86 WANV-QPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHGS-----RVNFSGKLYKVVSYGVRPDTELIDLEEVRRLA 159 (407)
T ss_dssp EEEC-CCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHHSEEEEECCCTTTSSCCHHHHHHHH
T ss_pred cceE-EecchHHHHHHHHHHhcCCCCEEEEecccccCccchHH-----HHHhcCceEEEEecCCCcccCccCHHHHHHHH
Confidence 6543 44566778888999999999999999988877743222 23344554455665555345789999999999
Q ss_pred hhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCceEEEEe
Q 018401 189 TLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFR 268 (356)
Q Consensus 189 ~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~ 268 (356)
++.++++|+++.+++|...|+++|.++|++||+++|+|++|+.|..+.+.....+...|++++|+||+++|++||+++++
T Consensus 160 ~~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~~~~ 239 (407)
T 2dkj_A 160 LEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGLILSN 239 (407)
T ss_dssp HHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEEEEES
T ss_pred hhcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCceEEEEC
Confidence 75479999997455688889999999999999999999999987766554333233479999999999999999999998
Q ss_pred cCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 269 KGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 269 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++ ++.+.+.....++..++++...++++.++++.+.+
T Consensus 240 ~~-------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 276 (407)
T 2dkj_A 240 DP-------------ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQ 276 (407)
T ss_dssp CH-------------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHS
T ss_pred CH-------------HHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHH
Confidence 32 45555544333455578888888888888888643
No 10
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.94 E-value=5.9e-26 Score=214.41 Aligned_cols=245 Identities=16% Similarity=0.102 Sum_probs=176.6
Q ss_pred CeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCC--CccccCCCchHHHHHHH
Q 018401 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP--EKWGGSLSGSPSNFQVY 126 (356)
Q Consensus 49 i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~--~~v~v~~sgs~a~~~~l 126 (356)
+.+.+++.++++.|++++.+.+...+ .....++.+++++++++++|+++ +++++++||++++. ++
T Consensus 4 ~~~~~gp~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~ 70 (384)
T 3zrp_A 4 LLLHVGPTTIKEDVLVAGLENNVGFT------------SKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SV 70 (384)
T ss_dssp --CCSSCSCCCHHHHHHTTCCSCCTT------------SHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HG
T ss_pred eeccCCCCCCCHHHHHHhhccccccc------------cHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HH
Confidence 56778888899999999987654311 12234566788899999999987 77778999999999 99
Q ss_pred HhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 127 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 127 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
.+++++||+|++++++|.+. ++. ..+...|.+++.+ +.+ .++.+|+++|++++++.++++|+++ ++| +|
T Consensus 71 ~~~~~~gd~vi~~~~~~~~~--~~~----~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 141 (384)
T 3zrp_A 71 TSLLKPNDKILVVSNGVFGD--RWE----QIFKRYPVNVKVL--RPS-PGDYVKPGEVEEEVRKSEYKLVALTHVETSTG 141 (384)
T ss_dssp GGGCCTTCEEEEECSSHHHH--HHH----HHHTTSSCEEEEE--CCS-TTCCCCHHHHHHHHHHSCEEEEEEESEETTTT
T ss_pred HhhcCCCCEEEEecCCcchH--HHH----HHHHHcCCcEEEe--cCC-CCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCc
Confidence 99999999999998766442 111 1223456666555 555 4567999999999987578999888 666 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhc--cCCcch
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN--KQGKEV 281 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~--~~g~~~ 281 (356)
.+.|+++|.++|++||+++|+|++|+.|..+.++...+ +|++++|+||+++||.| |+++++++..... ......
T Consensus 142 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~ 218 (384)
T 3zrp_A 142 VREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWN---VDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAG 218 (384)
T ss_dssp EECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTT---CSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCC
T ss_pred eECcHHHHHHHHHhcCCEEEEECcccccCccccccccC---CCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCc
Confidence 99999999999999999999999999888776665555 89999999999988888 9999887531111 001000
Q ss_pred hh-hHHHhh---cc-cc-CCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 282 FY-DYEEKI---NQ-AV-FPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 282 ~~-~~~~~~---~~-~~-~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++ +..... .. .. ....+|+++...++++.++++.+.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~ 261 (384)
T 3zrp_A 219 YYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEK 261 (384)
T ss_dssp STTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHh
Confidence 00 111110 00 00 1222379999999999999988765
No 11
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.94 E-value=1.7e-25 Score=213.44 Aligned_cols=248 Identities=15% Similarity=0.136 Sum_probs=178.4
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCc-cccCCCchHHHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEK-WGGSLSGSPSNFQVY 126 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~-v~v~~sgs~a~~~~l 126 (356)
.+.+++++..+++.|++++.+.+.. + + ......+.+++++++++++|++.++ +++++||++++..++
T Consensus 14 ~~~~~pgp~~~~~~v~~a~~~~~~~-----~-----~--~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~ 81 (411)
T 3nnk_A 14 RLLMGPGPINADPRVLRAMSSQLIG-----Q-----Y--DPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAIL 81 (411)
T ss_dssp CEEESSSCCCCCHHHHHHHTSCCCC-----T-----T--CHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHH
T ss_pred ceeecCCCCCCCHHHHHHhhccccc-----c-----c--cHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHH
Confidence 4567777778899999999764322 0 1 1223356677889999999998765 455889999999899
Q ss_pred HhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 127 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 127 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
.+++++||+|++++++|.+.. +...+...|.+++.++ .+ +++.+|+++|++++++.++++|+++ ++| +|
T Consensus 82 ~~~~~~gd~Vl~~~~~~~~~~------~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 152 (411)
T 3nnk_A 82 VSAIRPGDKVLVPVFGRFGHL------LCEIARRCRAEVHTIE--VP-WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTT 152 (411)
T ss_dssp HHHCCTTCEEEEEECSHHHHH------HHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHhcCCCCEEEEecCCchHHH------HHHHHHHcCCeEEEEe--cC-CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcc
Confidence 999999999999997664421 1113345576666664 44 4578899999999985589999998 566 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh---------
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI--------- 274 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~--------- 274 (356)
.+.|+++|.++|++||+++|+|++|+.|..+.+....+ +|++++|+||+|+||.| |++++++++...
T Consensus 153 ~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~---~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~ 229 (411)
T 3nnk_A 153 MLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWG---LDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEE 229 (411)
T ss_dssp EECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTT---CSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCG
T ss_pred eeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccC---CcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccc
Confidence 99999999999999999999999999988877666555 89999999999989888 999988753211
Q ss_pred -ccCCc---------chh-hhHHHhhcc-ccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 275 -NKQGK---------EVF-YDYEEKINQ-AVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 275 -~~~g~---------~~~-~~~~~~~~~-~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+.+|+ ..+ .+....... .......++++...++++.++++.+.+.
T Consensus 230 ~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 286 (411)
T 3nnk_A 230 GIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQE 286 (411)
T ss_dssp GGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 00100 000 011110000 0111234899999999999999887653
No 12
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.93 E-value=7.2e-26 Score=217.14 Aligned_cols=246 Identities=16% Similarity=0.171 Sum_probs=178.8
Q ss_pred HcCCeee-cCCCCCcHHHHHHHHhhhh--ccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHH
Q 018401 46 WKGLELI-PSENFTSVSVMQAVGSVMT--NKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 46 ~~~i~L~-~~~~~~~~~V~~a~~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~ 122 (356)
++.+-|+ ++..++++.|++++.+.+. ..+ +++....+.......+..+++++++++++|++++++++++||++++
T Consensus 21 ~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~ 98 (423)
T 3lvm_A 21 KLPIYLDYSATTPVDPRVAEKMMQFMTMDGTF--GNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESD 98 (423)
T ss_dssp CSSEECBTTTCCCCCHHHHHHHTTSSSTTSCC--SCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHH
T ss_pred CCCEeecCCCcCCCCHHHHHHHHHHHhhcccc--cCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHH
Confidence 4556665 3334779999999999887 433 3333201111122345667788999999999888888899999999
Q ss_pred HHHHHhhcC----CCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 018401 123 FQVYTALLK----PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 198 (356)
Q Consensus 123 ~~~l~al~~----~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l 198 (356)
.+++.++.+ +||+|+++.++|+++...+. .+...|.+++.+ +.+ +++.+|+++|++++++ ++++|++
T Consensus 99 ~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~-~~~~v~~ 169 (423)
T 3lvm_A 99 NLAIKGAANFYQKKGKHIITSKTEHKAVLDTCR-----QLEREGFEVTYL--APQ-RNGIIDLKELEAAMRD-DTILVSI 169 (423)
T ss_dssp HHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHH-----HHHHTTCEEEEE--CCC-TTSCCCHHHHHHHCCT-TEEEEEC
T ss_pred HHHHHHHHHhhccCCCEEEECCccchHHHHHHH-----HHHHcCCEEEEe--ccC-CCCccCHHHHHHhcCC-CcEEEEE
Confidence 988888763 89999999988876654322 112346556555 555 4578899999999987 8899988
Q ss_pred c-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh-
Q 018401 199 G-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI- 274 (356)
Q Consensus 199 ~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~- 274 (356)
+ ++| +|.+.|+++|.++|+++|+++|+|++|+.|..+.+....+ +|++++|+||+ .||.| |+++++++....
T Consensus 170 ~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~---~di~~~s~sK~-~g~~g~G~~~~~~~~~~~~ 245 (423)
T 3lvm_A 170 MHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLK---VDLMSFSGHKI-YGPKGIGALYVRRKPRVRI 245 (423)
T ss_dssp CSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSC---CSEEEEESTTT-TSCSSCEEEEECBTTBCCC
T ss_pred eCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcC---CCEEEechHHh-cCCCCeEEEEEeccccCCC
Confidence 8 666 8999999999999999999999999999887766655555 89999999994 56777 999988743111
Q ss_pred ---ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 275 ---NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 275 ---~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
..+++. ......++++...++++.++++.+.+
T Consensus 246 ~~~~~~~~~------------~~~~~~~~~~~~~~~a~~~al~~~~~ 280 (423)
T 3lvm_A 246 EAQMHGGGH------------ERGMRSGTLPVHQIVGMGEAYRIAKE 280 (423)
T ss_dssp CCSSCSSCT------------TTTTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred CccccCCcc------------cccccCCCCCHHHHHHHHHHHHHHHH
Confidence 111110 00122478899999999999988765
No 13
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.93 E-value=3.3e-25 Score=211.76 Aligned_cols=248 Identities=13% Similarity=0.113 Sum_probs=177.1
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccc-cCCCchHHHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG-GSLSGSPSNFQVY 126 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~-v~~sgs~a~~~~l 126 (356)
.+.+.+++..+++.+++++.+.... ++. ....++.+++++++++++|+++++++ +++|+++++..++
T Consensus 12 ~~~~~p~p~~~~~~v~~a~~~~~~~----------~~~--~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~ 79 (416)
T 3isl_A 12 RTIMTPGPVEVDPRVLRVMSTPVVG----------QFD--PAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVL 79 (416)
T ss_dssp CEECSSSSCCCCHHHHHHTTSCCCC----------TTS--HHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHH
T ss_pred ceeecCCCcCcCHHHHHHhcccCCC----------Ccc--HHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHH
Confidence 4556677777888888887653211 011 22355667888999999999887666 5889999999899
Q ss_pred HhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 127 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 127 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
.++++|||+|++++++|.+.. +...+...|.+++.+ +.+ .++.+|+++|++++++.++++|+++ ++| +|
T Consensus 80 ~~l~~~gd~Vl~~~~~~~~~~------~~~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 150 (416)
T 3isl_A 80 ASVIEPEDDVLIPIYGRFGYL------LTEIAERYGANVHML--ECE-WGTVFDPEDIIREIKKVKPKIVAMVHGETSTG 150 (416)
T ss_dssp HHHCCTTCEEEEEESSHHHHH------HHHHHHHTTCEEEEE--ECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHhcCCCCEEEEecCCcccHH------HHHHHHhcCCeeEEE--ecC-CCCCCCHHHHHHHHhhCCCcEEEEEccCCCCc
Confidence 999999999999997765421 111234557666666 444 4468899999999984489999998 666 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhc--------
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-------- 275 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~-------- 275 (356)
.+.|+++|.++|++||+++|+|++|+.|..+.+....+ +|++++|+||+++||.| |++++++++...+
T Consensus 151 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~ 227 (416)
T 3isl_A 151 RIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWK---IDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVER 227 (416)
T ss_dssp EECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTT---CSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC-----
T ss_pred eecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcC---CCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccc
Confidence 99999999999999999999999999988877666555 89999999999999988 9999887532110
Q ss_pred -----------cCCcch--h-hhHHHhhcc-ccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 276 -----------KQGKEV--F-YDYEEKINQ-AVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 276 -----------~~g~~~--~-~~~~~~~~~-~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
.+|... + .+....... .......++++...++++.++++.+.+.
T Consensus 228 Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 286 (416)
T 3isl_A 228 GIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEE 286 (416)
T ss_dssp -------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 011110 0 011110000 0111224799999999999999887653
No 14
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.93 E-value=6.1e-25 Score=208.50 Aligned_cols=247 Identities=15% Similarity=0.152 Sum_probs=175.6
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC-ccccCCCchHHHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE-KWGGSLSGSPSNFQVY 126 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~-~v~v~~sgs~a~~~~l 126 (356)
.+++++++.++++.|++++.+.+...+ . .......+++++++++++|++++ ++++++||++++..++
T Consensus 20 ~~~~~~g~~~~~~~v~~a~~~~~~~~~----------~--~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~ 87 (393)
T 2huf_A 20 KLLMGPGPSNAPQRVLDAMSRPILGHL----------H--PETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATL 87 (393)
T ss_dssp CEECSSSCCCCCHHHHHHTTSCCCCTT----------S--HHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHH
T ss_pred eEEecCCCCCCCHHHHHHHHhhhccCC----------C--HHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHH
Confidence 467777777889999999877654311 1 12345566788999999999875 6777999999999999
Q ss_pred HhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 127 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 127 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
.+++++||+|++++++|.++. +. ..+...|..++.+ +.+ +++.+|+++|++++++.++++|+++ ++| +|
T Consensus 88 ~~~~~~gd~vl~~~~~~~~~~--~~----~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 158 (393)
T 2huf_A 88 CNLLEDGDVILIGHTGHWGDR--SA----DMATRYGADVRVV--KSK-VGQSLSLDEIRDALLIHKPSVLFLTQGDSSTG 158 (393)
T ss_dssp HHHCCTTCEEEEEESSHHHHH--HH----HHHHHTTCEEEEE--ECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHHhCCCCEEEEECCCcchHH--HH----HHHHHcCCeeEEE--eCC-CCCCCCHHHHHHHHhccCCcEEEEEccCCCcc
Confidence 999999999999997776531 11 0122346566555 444 3467999999999975478999887 666 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhcc-CC--cc
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK-QG--KE 280 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~-~g--~~ 280 (356)
.+.|+++|.++|+++|+++|+|++|+.|..+.++...+ +|++++|+||+|+||.| |++++++++...+. .+ ..
T Consensus 159 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~ 235 (393)
T 2huf_A 159 VLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWE---IDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVK 235 (393)
T ss_dssp EECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTT---CSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCS
T ss_pred ccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcC---ccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCc
Confidence 99999999999999999999999999887766554444 89999999999999888 99999874211100 00 00
Q ss_pred hhh-h---HHHhhcc-ccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 281 VFY-D---YEEKINQ-AVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 281 ~~~-~---~~~~~~~-~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
.++ + ..+.+.. .......++++...++++.++++.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 278 (393)
T 2huf_A 236 VYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACE 278 (393)
T ss_dssp CGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 000 0 0000000 000112478999999999999988754
No 15
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.93 E-value=4.3e-25 Score=209.51 Aligned_cols=242 Identities=14% Similarity=0.050 Sum_probs=169.8
Q ss_pred cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCC
Q 018401 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKP 132 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~ 132 (356)
++..++++.|++++.+.+.. . .+ .........+++++++++|++++++++++||++++..++.+++++
T Consensus 15 ~~~~~~~~~v~~a~~~~~~~-~-------~~----~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~ 82 (392)
T 2z9v_A 15 AGPVNAYPEVLRGLGRTVLY-D-------YD----PAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISP 82 (392)
T ss_dssp SSCCCCCHHHHHHTTSCCCC-T-------TS----HHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCT
T ss_pred CCCcCCCHHHHHHHhccccc-c-------cc----HHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCC
Confidence 45557899999999876543 1 00 122344557889999999998778888999999999899999999
Q ss_pred CCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh-cCCcEEEEc-CCC-CCCcccH
Q 018401 133 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAG-ASA-YARLYDY 209 (356)
Q Consensus 133 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~-~~~k~v~l~-~~n-~g~~~~l 209 (356)
||+|++++++|.++. +.. .+...|.+++.+ +.+ +++.+|+++|++++++ .++++|+++ ++| +|.+.|+
T Consensus 83 gd~Vl~~~~~~~~~~--~~~----~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l 153 (392)
T 2z9v_A 83 DDVVLNLASGVYGKG--FGY----WAKRYSPHLLEI--EVP-YNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPI 153 (392)
T ss_dssp TCCEEEEESSHHHHH--HHH----HHHHHCSCEEEE--ECC-TTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCH
T ss_pred CCEEEEecCCcccHH--HHH----HHHHcCCceEEe--eCC-CCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccH
Confidence 999999998776551 111 122346556555 444 3467999999999953 278999887 666 8999999
Q ss_pred HHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhc---cC-Ccchhhh
Q 018401 210 ERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN---KQ-GKEVFYD 284 (356)
Q Consensus 210 ~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~---~~-g~~~~~~ 284 (356)
++|.++|+++|+++|+|++|+.|..+.++...+ +|++++|+||+++||.| |+++++++....+ .. .+....+
T Consensus 154 ~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~---~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~ 230 (392)
T 2z9v_A 154 DAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCK---ADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLS 230 (392)
T ss_dssp HHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGT---CSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTC
T ss_pred HHHHHHHHHcCCeEEEEcccccCCccccccccc---ceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceecc
Confidence 999999999999999999999887765543333 89999999999999888 9999987421100 00 0000000
Q ss_pred HHHhhcc-ccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 285 YEEKINQ-AVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 285 ~~~~~~~-~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
+...+.. .......++++...++++.++++.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 265 (392)
T 2z9v_A 231 IVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLN 265 (392)
T ss_dssp SGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 0000000 001122478899999999999988765
No 16
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.93 E-value=3.2e-25 Score=209.20 Aligned_cols=256 Identities=15% Similarity=0.070 Sum_probs=176.5
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC-cccc-CCCchHHHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE-KWGG-SLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~-~v~v-~~sgs~a~~~ 124 (356)
...++++++.++|++|++++.+.+... + .....++.+++++++++++|++.+ ++++ ++||++++..
T Consensus 19 ~~~~~~pgp~~~~~~v~~a~~~~~~~~----------~--~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~ 86 (376)
T 3f0h_A 19 GMLNFTVGPVMSSEEVRAIGAEQVPYF----------R--TTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEA 86 (376)
T ss_dssp SCEECSSSSCCCCHHHHHHHTSCCCCC----------S--SHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHH
T ss_pred CceeecCCCCCCcHHHHHHhcCCCCCC----------C--CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHH
Confidence 357888888889999999997755321 1 123346667888999999999653 5666 8899999998
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n- 202 (356)
++.+++++||+|+++++.+.+.. .. ......|..+..++ .+ .++.+|+++|++++++ ++++|+++ ++|
T Consensus 87 ~~~~~~~~gd~vi~~~~~~~~~~--~~----~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~np 156 (376)
T 3f0h_A 87 VVMNCFTKKDKVLVIDGGSFGHR--FV----QLCEIHEIPYVALK--LE-HGKKLTKEKLYEYDNQ-NFTGLLVNVDETS 156 (376)
T ss_dssp HHHHHCCTTCCEEEEESSHHHHH--HH----HHHHHTTCCEEEEE--CC-TTCCCCHHHHHTTTTS-CCCEEEEESEETT
T ss_pred HHHhccCCCCeEEEEeCChhhHH--HH----HHHHHcCCceEEEe--CC-CCCCCCHHHHHHhhcc-CceEEEEecccCC
Confidence 99999999999999875433221 00 12233465665554 44 4478999999998776 89999988 666
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccC-Ccc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ-GKE 280 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~-g~~ 280 (356)
+|.+.|+++|.++|++||+++|+|++|+.+..+.++...+ +|++++|+||+++||.| |++++++++...... ...
T Consensus 157 tG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~---~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~ 233 (376)
T 3f0h_A 157 TAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECG---ADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVR 233 (376)
T ss_dssp TTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHT---CSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCC
T ss_pred cceecCHHHHHHHHHHcCCEEEEEcCccccCccccccccC---ccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCC
Confidence 8999999999999999999999999999887664443334 89999999999987888 898888753211100 000
Q ss_pred hh-hhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 281 VF-YDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 281 ~~-~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
.+ .+...............+++...++++.++++.+.+..+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 281 (376)
T 3f0h_A 234 TMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVA 281 (376)
T ss_dssp CSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred ceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 00 011111111111223467788888889999988876423333333
No 17
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.93 E-value=1.2e-25 Score=211.87 Aligned_cols=237 Identities=15% Similarity=0.152 Sum_probs=175.8
Q ss_pred cCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc--
Q 018401 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL-- 130 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~-- 130 (356)
++..++++.|++++.+.+...+ +++...+ .......++.+++++++++++|++++++++++|+++++..++.++.
T Consensus 7 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~ 83 (382)
T 4hvk_A 7 TSAKPVDERILEAMLPYMTESF--GNPSSVH-SYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMR 83 (382)
T ss_dssp TTCCCCCHHHHHHHHHHHHTSC--CCTTCSS-HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHHhhc--CCCcccc-hHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhh
Confidence 3445789999999999887643 4444322 1112345666788999999999988888889999999998888887
Q ss_pred --CCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCc
Q 018401 131 --KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARL 206 (356)
Q Consensus 131 --~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~ 206 (356)
+|||+|+++.++|+++...+.. ....|.+++.+ +.+ +++.+|+++|++++++ ++++|+++ ++| +|.+
T Consensus 84 ~~~~gd~vi~~~~~~~~~~~~~~~-----~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~ 154 (382)
T 4hvk_A 84 NARKGKHILVSAVEHMSVINPAKF-----LQKQGFEVEYI--PVG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEIGTI 154 (382)
T ss_dssp HGGGCCEEEEETTCCHHHHHHHHH-----HHHTTCEEEEE--CBC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCBB
T ss_pred hcCCCCEEEECCCCcHHHHHHHHH-----HHhcCCEEEEe--ccC-CCCCcCHHHHHHHhcc-CceEEEEECCCCCceee
Confidence 9999999999888776543321 12236556555 555 4578999999999987 88999888 666 8999
Q ss_pred ccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcc--hhccCCcchhh
Q 018401 207 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINKQGKEVFY 283 (356)
Q Consensus 207 ~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~--~~~~~g~~~~~ 283 (356)
.|+++|.++|++||+ +|+|++|+.|..+.++...+ +|++++|+||+ .||.| |+++++++.. +...++...
T Consensus 155 ~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~-~g~~g~g~~~~~~~~~~~~~~~~~~~~-- 227 (382)
T 4hvk_A 155 QPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIG---ADMLTISSNDI-YGPKGVGALWIRKEAKLQPVILGGGQE-- 227 (382)
T ss_dssp CCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHT---CSEEEEESGGG-TSCTTCEEEEEETTCCCCCSSCSSCTG--
T ss_pred CCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcC---CCEEEEeHHHh-cCCCceEEEEEcCccCcCcccccCCCc--
Confidence 999999999999999 99999999887765543334 89999999995 57777 9999887531 111111110
Q ss_pred hHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 284 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 284 ~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
.....++++...++++.++++++.+
T Consensus 228 ----------~~~~~~~~~~~~~~~~~~al~~~~~ 252 (382)
T 4hvk_A 228 ----------NGLRSGSENVPSIVGFGKAAEITAM 252 (382)
T ss_dssp ----------GGTSCSCCCHHHHHHHHHHHHHHHH
T ss_pred ----------CccccCCcCHHHHHHHHHHHHHHHh
Confidence 0112478899999999999887653
No 18
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.93 E-value=4e-25 Score=210.24 Aligned_cols=243 Identities=16% Similarity=0.137 Sum_probs=176.0
Q ss_pred CCeeecCCC-CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC-CCCccccCCCchHHHHHH
Q 018401 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 48 ~i~L~~~~~-~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~v~v~~sgs~a~~~~ 125 (356)
.+.|..+.+ +.|+.|++++.+.+...+ ++++...+...........++++++++++|. +++++++++|+++++..+
T Consensus 24 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~ 101 (406)
T 1kmj_A 24 LAYLDSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLV 101 (406)
T ss_dssp CEECCTTTCCCCCHHHHHHHHHHHHHTC--CCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhhc--CCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHH
Confidence 567765444 578999999999887632 2222200000011234455788999999999 677788899999999989
Q ss_pred HHhh----cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 126 YTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 126 l~al----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
+.++ +++||+|+++.++|.+...++.. .+...|.+++.+ +.+ +++.+|+++|++++++ ++++|+++ +
T Consensus 102 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~----~~~~~g~~~~~~--~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~ 173 (406)
T 1kmj_A 102 ANSWGNSNVRAGDNIIISQMEHHANIVPWQM----LCARVGAELRVI--PLN-PDGTLQLETLPTLFDE-KTRLLAITHV 173 (406)
T ss_dssp HHHTHHHHCCTTCEEEEETTCCGGGTHHHHH----HHHHHTCEEEEE--CBC-TTSCBCGGGHHHHCCT-TEEEEEEESB
T ss_pred HHHhhhhcCCCCCEEEEecccchHHHHHHHH----HHHhCCCEEEEE--ecC-CCCCcCHHHHHHHhcc-CCeEEEEeCC
Confidence 9998 89999999999998876543221 123346556555 454 4567899999999987 88999887 6
Q ss_pred CC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCC
Q 018401 201 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQG 278 (356)
Q Consensus 201 ~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g 278 (356)
+| +|.+.|+++|.++|++||+++|+|++|+.|..+.++... ++|++++|+||++ ||.| |++++++++
T Consensus 174 ~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~---~~d~~~~s~~K~~-g~~G~G~~~~~~~~------- 242 (406)
T 1kmj_A 174 SNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL---DCDFYVFSGHKLY-GPTGIGILYVKEAL------- 242 (406)
T ss_dssp CTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEEGGGTT-SCTTCEEEEECHHH-------
T ss_pred CccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCccccc---CCCEEEEEchhcc-CCCCcEEEEEeHHH-------
Confidence 66 899999999999999999999999999988665433222 3899999999977 7888 999998742
Q ss_pred cchhhhHHHhhcccc-------------------CC--CCCCCCcHHHHHHHHHHHHHHhc
Q 018401 279 KEVFYDYEEKINQAV-------------------FP--GLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 279 ~~~~~~~~~~~~~~~-------------------~~--~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
.+.+.... .+ ...|++++..++++.++++++.+
T Consensus 243 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 296 (406)
T 1kmj_A 243 -------LQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSA 296 (406)
T ss_dssp -------HHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHH
T ss_pred -------HhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHH
Confidence 22222111 01 12478899999999889988864
No 19
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.93 E-value=8.4e-25 Score=207.70 Aligned_cols=233 Identities=14% Similarity=0.070 Sum_probs=175.3
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC-ccccCCCchHHHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE-KWGGSLSGSPSNFQVY 126 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~-~v~v~~sgs~a~~~~l 126 (356)
.+.+.++..++++.|++++.+.+.+. |+ ....++.+++++++++++|++++ ++++++||++++..++
T Consensus 35 ~~l~~~~~~~~~~~v~~a~~~~~~~~----------~~--~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~ 102 (393)
T 1vjo_A 35 RLLLGPGPSNAHPSVLQAMNVSPVGH----------LD--PAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATI 102 (393)
T ss_dssp CEECSSSCCCCCHHHHHHHSSCCCCT----------TS--HHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHH
T ss_pred ceeccCCCCCCCHHHHHHHhcccccc----------cC--HHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHH
Confidence 34555667778999999998765431 11 12456777899999999999877 7888999999999999
Q ss_pred HhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 127 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 127 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
.+++++||+|++++++|.+. . +...+...|.+++.+ +.+ .++.+|+++|++++++.++++|+++ ++| +|
T Consensus 103 ~~~~~~gd~Vl~~~~~~~~~--~----~~~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG 173 (393)
T 1vjo_A 103 ANAVEPGDVVLIGVAGYFGN--R----LVDMAGRYGADVRTI--SKP-WGEVFSLEELRTALETHRPAILALVHAETSTG 173 (393)
T ss_dssp HHHCCTTCEEEEEESSHHHH--H----HHHHHHHTTCEEEEE--ECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HhccCCCCEEEEEcCChhHH--H----HHHHHHHcCCceEEE--ecC-CCCCCCHHHHHHHHhhCCceEEEEeccCCCcc
Confidence 99999999999999776551 0 111334556666555 454 3567999999999975468999887 656 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhh
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFY 283 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~ 283 (356)
.+.|+++|.++|+++|+++|+|++|+.|..+.++...+ +|++++|+||++++|.+ |+++++++
T Consensus 174 ~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~di~~~s~sK~l~~~~~~G~l~~~~~------------- 237 (393)
T 1vjo_A 174 ARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWG---VDLAYSCSQKGLGCSPGASPFTMSSR------------- 237 (393)
T ss_dssp EECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTT---CSEEECCSSSTTCSCSSCEEEEECHH-------------
T ss_pred eeccHHHHHHHHHHcCCEEEEECCccccCcCCcccccC---ccEEEEcCcccccCCCceEEEEECHH-------------
Confidence 88999999999999999999999999887665554444 89999999999988888 99999874
Q ss_pred hHHHhhcc-------cc----------CCCC--CCCCcHHHHHHHHHHHHHHhc
Q 018401 284 DYEEKINQ-------AV----------FPGL--QGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 284 ~~~~~~~~-------~~----------~~~~--~gt~~~~~~~al~~Al~~~~~ 318 (356)
+.+.+.. .. .... .|+++.+..+++.++++.+.+
T Consensus 238 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~ 290 (393)
T 1vjo_A 238 -AIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQ 290 (393)
T ss_dssp -HHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHH
T ss_pred -HHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 2222210 00 0112 248899999999999988744
No 20
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.93 E-value=1.6e-25 Score=209.07 Aligned_cols=242 Identities=14% Similarity=0.081 Sum_probs=172.5
Q ss_pred CeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHh
Q 018401 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTA 128 (356)
Q Consensus 49 i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~a 128 (356)
++++++..++++.|++++.+.+... .+ ........++++++++++|++++++++++||++++..++.+
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~~--------~~----~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~ 70 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLHH--------RT----EAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKN 70 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCCT--------TS----HHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhccCCCCc--------cC----HHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHh
Confidence 5677888889999999998876421 11 12334456788999999999877777799999999999999
Q ss_pred hcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCc
Q 018401 129 LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARL 206 (356)
Q Consensus 129 l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~ 206 (356)
++++||+|++++++|.++. +.. .+...|.+++.+ +.+ +++.+|++++++ + ++++|+++ ++| +|.+
T Consensus 71 ~~~~gd~vl~~~~~~~~~~--~~~----~~~~~g~~~~~v--~~~-~~~~~d~~~l~~---~-~~~~v~~~~~~nptG~~ 137 (352)
T 1iug_A 71 LFAPGERVLVPVYGKFSER--FYE----IALEAGLVVERL--DYP-YGDTPRPEDVAK---E-GYAGLLLVHSETSTGAL 137 (352)
T ss_dssp HCCTTCEEEEEECSHHHHH--HHH----HHHHTTCEEEEE--ECC-TTCCCCTTTSCC---S-SCSEEEEESEETTTTEE
T ss_pred ccCCCCeEEEEeCCchhHH--HHH----HHHHcCCceEEE--eCC-CCCCCCHHHHhc---c-CCcEEEEEEecCCccee
Confidence 9999999999998776653 110 122346566555 444 346788888876 3 78999887 666 8999
Q ss_pred ccHHHHHHHHHHc--CCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhh
Q 018401 207 YDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFY 283 (356)
Q Consensus 207 ~~l~~I~~la~~~--g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~ 283 (356)
.|+++|.++|+++ |+++|+|++|+.|..+.++...+ +|++++|+|||++||.| |+++++++.......+... .
T Consensus 138 ~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~-~ 213 (352)
T 1iug_A 138 ADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAMG---VDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYY-L 213 (352)
T ss_dssp CCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGT---CSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSST-T
T ss_pred cCHHHHHHHHHhhCCCCEEEEECCccccCcceeccccC---eeEEEecCcccccCCCceeEEEECHHHHHHhhCCCce-e
Confidence 9999999999999 99999999999887665543333 89999999999999988 9999877421111101000 0
Q ss_pred hHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 284 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 284 ~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
++...+.........++++...++++.++++.+.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 249 (352)
T 1iug_A 214 DLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPR 249 (352)
T ss_dssp CHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG
T ss_pred eHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 111111111111224788999999999999887653
No 21
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.93 E-value=7.9e-25 Score=206.95 Aligned_cols=244 Identities=13% Similarity=0.072 Sum_probs=174.2
Q ss_pred CeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchHHHHHHHH
Q 018401 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSPSNFQVYT 127 (356)
Q Consensus 49 i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~a~~~~l~ 127 (356)
....++..++++.+++++.+.+.+. |+ ....++.+++++++++++|++ ++++++++||++++..++.
T Consensus 22 ~l~~~~~~~~~~~v~~a~~~~~~~~----------~~--~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~ 89 (386)
T 2dr1_A 22 KLFTAGPVACFPEVLEIMKVQMFSH----------RS--KEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIR 89 (386)
T ss_dssp EECCSSSCCCCHHHHHHTTSCCCCT----------TS--HHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHH
T ss_pred eeecCCCcCCcHHHHHHHhcccccc----------cC--HHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHH
Confidence 3344666678999999887765431 11 123567788999999999997 6667779999999999999
Q ss_pred hhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh-cCCcEEEEc-CCC-CC
Q 018401 128 ALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAG-ASA-YA 204 (356)
Q Consensus 128 al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~-~~~k~v~l~-~~n-~g 204 (356)
+++++||+|++++++|.+.. +...+...|.+++.+ +.+ .++.+|+++|++++.+ .++++|+++ ++| +|
T Consensus 90 ~l~~~gd~vl~~~~~~~~~~------~~~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG 160 (386)
T 2dr1_A 90 NGVSKGGKVLVTIIGAFGKR------YKEVVESNGRKAVVL--EYE-PGKAVKPEDLDDALRKNPDVEAVTITYNETSTG 160 (386)
T ss_dssp HHSCTTCEEEEEESSHHHHH------HHHHHHHTTCEEEEE--ECC-TTCCCCHHHHHHHHHHCTTCCEEEEESEETTTT
T ss_pred HhhcCCCeEEEEcCCchhHH------HHHHHHHhCCceEEE--ecC-CCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcc
Confidence 99999999999997775520 111334456666555 454 3567999999999953 378999887 566 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhcc----CCc
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK----QGK 279 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~----~g~ 279 (356)
.+.|+++|.++|++||+++|+|++|+.|..+.++...+ +|++++|+||++++|.| |++++++++..... .|+
T Consensus 161 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~ 237 (386)
T 2dr1_A 161 VLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWG---LDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGW 237 (386)
T ss_dssp EECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTT---CSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCS
T ss_pred hhCCHHHHHHHHHHcCCeEEEEccccccCccccccccC---CcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCce
Confidence 99999999999999999999999999887765544444 89999999999998877 99999875321110 111
Q ss_pred chhhhHHHhhcccc-CCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 280 EVFYDYEEKINQAV-FPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 280 ~~~~~~~~~~~~~~-~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
. .++...+.... .....++++.+..+++.++++.+.+
T Consensus 238 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 275 (386)
T 2dr1_A 238 Y--FDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEK 275 (386)
T ss_dssp T--TCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHH
T ss_pred E--EeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 0 01111111100 0122468888899999999988754
No 22
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.93 E-value=1.1e-24 Score=206.28 Aligned_cols=247 Identities=15% Similarity=0.105 Sum_probs=174.7
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC-ccccCCCchHHHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE-KWGGSLSGSPSNFQVY 126 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~-~v~v~~sgs~a~~~~l 126 (356)
.+.+++++..+++.|++++.+.+...+ .........++++++++++|.+.. ++++++||++++..++
T Consensus 24 ~~~~~p~p~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~ 91 (393)
T 3kgw_A 24 RLLLGPGPSNLAPRVLAAGSLRMIGHM------------QKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETAL 91 (393)
T ss_dssp CEECSSSCCCCCHHHHHHTTCCCCCTT------------SHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHH
T ss_pred ceeccCCCCCCCHHHHHHhcccccCcc------------cHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHH
Confidence 456777777889999999876432210 022345566788999999999765 4667999999999899
Q ss_pred HhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 127 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 127 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
.+++++||+|+++.+.|.+.. ....+...|..++.+ +.+ .++.+|+++|++++++.++++|+++ ++| +|
T Consensus 92 ~~~~~~gd~vl~~~~~~~~~~------~~~~~~~~g~~~~~~--~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 162 (393)
T 3kgw_A 92 FNLLEPGDSFLTGTNGIWGMR------AAEIADRIGARVHQM--IKK-PGEHYTLQEVEEGLAQHKPVLLFLVHGESSTG 162 (393)
T ss_dssp HHHCCTTCEEEEEESSHHHHH------HHHHHHHTTCEEEEE--ECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HhcCCCCCEEEEEeCCchhHH------HHHHHHHcCCceEEE--eCC-CCCCCCHHHHHHHHhhCCCcEEEEeccCCcch
Confidence 999999999999874442110 011234456666556 444 4467999999999986589999888 666 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhc---cCCcc
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN---KQGKE 280 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~---~~g~~ 280 (356)
.+.|+++|.++|++||+++|+|++|+.|..+.+....+ +|++++|+||+++||.| |++++++++...+ ..+..
T Consensus 163 ~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~---~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~ 239 (393)
T 3kgw_A 163 VVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQG---IDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPV 239 (393)
T ss_dssp EECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTT---CCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCS
T ss_pred hhccHHHHHHHHHHcCCEEEEECCccccCcccchhhcC---CCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCC
Confidence 99999999999999999999999999887776655555 89999999999988888 9999987532111 00110
Q ss_pred h-hhhHH---HhhccccC-CCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 281 V-FYDYE---EKINQAVF-PGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 281 ~-~~~~~---~~~~~~~~-~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
. ..++. ..+..... ....++++...++++.++++.+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 282 (393)
T 3kgw_A 240 SFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAE 282 (393)
T ss_dssp CSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred ceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 0 00111 11110011 112378899999999999988765
No 23
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.92 E-value=6.9e-25 Score=209.71 Aligned_cols=241 Identities=15% Similarity=0.124 Sum_probs=174.8
Q ss_pred CCeeecCCC-CCcHHHHHHHHhhhhccCCCCCCC--CccCCCchhHHHHHHHHHHHHHHHcCC-CCCccccCCCchHHHH
Q 018401 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPG--ARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGGSLSGSPSNF 123 (356)
Q Consensus 48 ~i~L~~~~~-~~~~~V~~a~~~~l~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~v~v~~sgs~a~~ 123 (356)
.+.|..+.+ ++|+.|++++.+.+.... ++++ ...|+ ........++++.+++++|. +++++++++||++++.
T Consensus 29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~y~--~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~ 104 (420)
T 1t3i_A 29 LVYLDNAATSQKPRAVLEKLMHYYENDN--ANVHRGAHQLS--VRATDAYEAVRNKVAKFINARSPREIVYTRNATEAIN 104 (420)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHTC--CCC--CCSHHH--HHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhcc--CCCCcccchHH--HHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHH
Confidence 578875555 568999999999887522 2222 11111 01123445688999999999 7778888999999999
Q ss_pred HHHHhh----cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 018401 124 QVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 199 (356)
Q Consensus 124 ~~l~al----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~ 199 (356)
.++.++ +++||+|+++.++|.+...++.. .+...|.+++.+ +.+ +++.+|+++|++++++ ++++|+++
T Consensus 105 ~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~----~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~l~~-~~~~v~~~ 176 (420)
T 1t3i_A 105 LVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQM----VAAKTGAVLKFV--QLD-EQESFDLEHFKTLLSE-KTKLVTVV 176 (420)
T ss_dssp HHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHH----HHHHHCCEEEEE--CBC-TTSSBCHHHHHHHCCT-TEEEEEEE
T ss_pred HHHHHhhhcccCCCCEEEECcchhHHHHHHHHH----HHHhcCcEEEEe--ccC-CCCCcCHHHHHHhhCC-CceEEEEe
Confidence 899998 89999999999888775432221 122346556555 454 4577999999999987 88999887
Q ss_pred -CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhcc
Q 018401 200 -ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 276 (356)
Q Consensus 200 -~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 276 (356)
++| +|.+.|+++|.++|+++|+++|+|++|+.|..+.++...+ +|++++|+|| +.||.| |+++++++
T Consensus 177 ~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---~di~~~s~sK-~~~~~g~G~~~~~~~------ 246 (420)
T 1t3i_A 177 HISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLID---CDWLVASGHK-MCAPTGIGFLYGKEE------ 246 (420)
T ss_dssp SBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHT---CSEEEEEGGG-TTSCTTCEEEEECHH------
T ss_pred CCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcC---CCEEEEehhh-hcCCCceEEEEEchH------
Confidence 666 8999999999999999999999999999887654333333 8999999999 557777 99998874
Q ss_pred CCcchhhhHHHhhccccC------------------C--CCCCCCcHHHHHHHHHHHHHHhc
Q 018401 277 QGKEVFYDYEEKINQAVF------------------P--GLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 277 ~g~~~~~~~~~~~~~~~~------------------~--~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
+.+.+..... + ...|+++...++++.++++++.+
T Consensus 247 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 300 (420)
T 1t3i_A 247 --------ILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTD 300 (420)
T ss_dssp --------HHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHH
T ss_pred --------HHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHH
Confidence 3333222111 1 11378888889888888888764
No 24
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.92 E-value=5.5e-25 Score=205.27 Aligned_cols=242 Identities=16% Similarity=0.054 Sum_probs=170.4
Q ss_pred CeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC--CCccccCCCchHHHHHHH
Q 018401 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGGSLSGSPSNFQVY 126 (356)
Q Consensus 49 i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~--~~~v~v~~sgs~a~~~~l 126 (356)
+++++++.++|+.|++++.+.+.. + ++ ....+..+++++++++++|++ ++++++++||++++..++
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~-~--------~~---~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~ 69 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRG-H--------LD---PEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGL 69 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCC-T--------TC---HHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHhccccc-c--------cC---HHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHH
Confidence 567888889999999999876643 1 11 123345567889999999995 566777999999999888
Q ss_pred HhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 127 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 127 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
.++++ |+|++++++|.++ ++. ..+...|.+++.+ +.+ +++.+|+++|++++++.++++|+++ ++| +|
T Consensus 70 ~~~~~--d~vl~~~~~~~~~--~~~----~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG 138 (353)
T 2yrr_A 70 ANLDR--GPVLVLVNGAFSQ--RVA----EMAALHGLDPEVL--DFP-PGEPVDPEAVARALKRRRYRMVALVHGETSTG 138 (353)
T ss_dssp HTCSC--CCEEEEECSHHHH--HHH----HHHHHTTCCEEEE--ECC-TTSCCCHHHHHHHHHHSCCSEEEEESEETTTT
T ss_pred HHhcC--CcEEEEcCCCchH--HHH----HHHHHcCCceEEE--eCC-CCCCCCHHHHHHHHHhCCCCEEEEEccCCCcc
Confidence 88876 8999988777654 111 1223456666556 444 4467999999999975468999887 666 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhcc--CCcch
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK--QGKEV 281 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~--~g~~~ 281 (356)
.+.|+++|.++|+++|+++|+|++|+.|..+.++... ++|++++|+||+++||.| |+++++++....+. .+..
T Consensus 139 ~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~- 214 (353)
T 2yrr_A 139 VLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAM---GVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWY- 214 (353)
T ss_dssp EECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH---TCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCST-
T ss_pred eecCHHHHHHHHHHcCCeEEEEcCccccccccccccc---CceEEEecCcccccCCCceEEEEECHHHHHHhccCCCcc-
Confidence 9999999999999999999999999877655433222 379999999999999888 99999874211111 0000
Q ss_pred hhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 282 FYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 282 ~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
.+..............++++...++++.++++.+.+
T Consensus 215 -~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 250 (353)
T 2yrr_A 215 -LDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLE 250 (353)
T ss_dssp -TCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred -ccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 000000000001122378899999999899988754
No 25
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.92 E-value=4.2e-25 Score=208.53 Aligned_cols=235 Identities=14% Similarity=0.151 Sum_probs=170.7
Q ss_pred CCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc----
Q 018401 55 ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL---- 130 (356)
Q Consensus 55 ~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~---- 130 (356)
..++|+.|++++.+.+.+.+ +++...| ..........+++++++++++|++++++++++||++++..++.++.
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~ 85 (382)
T 4eb5_A 9 AKPVDERILEAMLPYMTESF--GNPSSVH-SYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNA 85 (382)
T ss_dssp CCCCCHHHHHHHHHHHHTSC--CCTTCSS-HHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHG
T ss_pred CCCCCHHHHHHHHHHHHhcc--CCCCCCc-HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhcc
Confidence 34789999999999887633 3333312 1112234556678899999999988788789999999998888887
Q ss_pred CCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc
Q 018401 131 KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD 208 (356)
Q Consensus 131 ~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~ 208 (356)
++||+|++++++|.++...... ....|.+++.+ +.+ +++.+|+++|++++++ ++++|+++ ++| +|.+.|
T Consensus 86 ~~gd~Vl~~~~~~~~~~~~~~~-----~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~ 156 (382)
T 4eb5_A 86 RKGKHILVSAVEHMSVINPAKF-----LQKQGFEVEYI--PVG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEIGTIQP 156 (382)
T ss_dssp GGCCEEEEETTCCHHHHHHHHH-----HTTTTCEEEEE--CBC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCBBCC
T ss_pred CCCCEEEECCCcchHHHHHHHH-----HHhCCcEEEEe--ccC-CCCccCHHHHHHHhcC-CCeEEEEeccCCCccccCC
Confidence 8999999999888766443221 11246556555 555 4577999999999986 78998887 666 899999
Q ss_pred HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCc--chhccCCcchhhhH
Q 018401 209 YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--KEINKQGKEVFYDY 285 (356)
Q Consensus 209 l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~--~~~~~~g~~~~~~~ 285 (356)
+++|.++|+++|++ |+|++|+.|..+.++... ++|++++|+||+ .||.| |+++++++. .+...+++. .
T Consensus 157 l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~---~~di~~~s~sK~-~g~~g~G~~~~~~~~~l~~~~~~~~~---~- 227 (382)
T 4eb5_A 157 VEEISEVLAGKAAL-HIDATASVGQIEVDVEKI---GADMLTISSNDI-YGPKGVGALWIRKEAKLQPVILGGGQ---E- 227 (382)
T ss_dssp HHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHH---TCSEEEEETGGG-TCCSSCEEEEEETTCCCCCSSCSSCT---G-
T ss_pred HHHHHHHHHHCCCE-EEEcchhcCCcccCcccc---CCCEEEeehHHh-cCCCceEEEEEccccccCceecCCCc---c-
Confidence 99999999999999 999999987655433222 389999999996 67887 999988752 111111110 0
Q ss_pred HHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 286 EEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 286 ~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
.....++++...++++.++++.+.+
T Consensus 228 --------~~~~~~~~~~~~~~~~~~al~~~~~ 252 (382)
T 4eb5_A 228 --------NGLRSGSENVPSIVGFGKAAEITAM 252 (382)
T ss_dssp --------GGTSCSCCCHHHHHHHHHHHHHHHH
T ss_pred --------ccccCCCccHHHHHHHHHHHHHHHH
Confidence 0112478888888888889988754
No 26
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=7.2e-25 Score=209.02 Aligned_cols=243 Identities=12% Similarity=0.067 Sum_probs=176.6
Q ss_pred CCeeecCCC-CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHH
Q 018401 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVY 126 (356)
Q Consensus 48 ~i~L~~~~~-~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l 126 (356)
.+.|+.+.+ ++++.|++++.+.+...+ +++...|..+ .......+++++++++++|++++++++++|+++++..++
T Consensus 27 ~~~ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~ 103 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSVATTVSTAFRRSG--ASTVGAHPSA-RRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLA 103 (406)
T ss_dssp CEECBGGGCCCCCHHHHHHHHHHHHHCC--SSSCSSSHHH-HHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHH
T ss_pred eEEEeCCCcCCCCHHHHHHHHHHHHhcC--CCCCCccHHH-HHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHH
Confidence 455554433 678999999999887532 2232222110 113455567889999999998788888999999998888
Q ss_pred Hhh---cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 127 TAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 127 ~al---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
.++ +++||+|+++.++|.++..++... ....|.+++.+ +.+++++.+|+++|++++++ ++++|+++ ++|
T Consensus 104 ~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~----~~~~g~~v~~v--~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n 176 (406)
T 3cai_A 104 EASSSRAGLGYEVIVSRLDDEANIAPWLRA----AHRYGAKVKWA--EVDIETGELPTWQWESLISK-STRLVAVNSASG 176 (406)
T ss_dssp HHTGGGGBTTCEEEEETTSCGGGTHHHHHH----HHHHBCEEEEE--CCCTTTCCCCGGGHHHHCCT-TEEEEEEESBCT
T ss_pred HHHhhccCCCCEEEEcCCccHHHHHHHHHH----HHhcCCeEEEE--ecCcccCCcCHHHHHHHhCC-CceEEEEeCCcC
Confidence 877 789999999999998775543311 11146556555 44434578899999999986 88999887 666
Q ss_pred -CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCce-EEEEecCcchhccCCcc
Q 018401 203 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA-MIFFRKGVKEINKQGKE 280 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG-~l~~~~~~~~~~~~g~~ 280 (356)
+|.+.|+++|.++|+++|+++|+|++|+.|..+.++...+ +|++++|+||++ ||.+| ++++++
T Consensus 177 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~---~d~~~~s~~K~~-g~~~G~~~~~~~----------- 241 (406)
T 3cai_A 177 TLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETD---ADVVTVNAHAWG-GPPIGAMVFRDP----------- 241 (406)
T ss_dssp TTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHC---CSEEEEEGGGGT-SCSCEEEEESCH-----------
T ss_pred CccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcC---CCEEEeehhhhc-CCCcCeEEEEeh-----------
Confidence 8999999999999999999999999999887655443333 899999999975 56577 888877
Q ss_pred hhhhHHHhhccccC--------CCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 281 VFYDYEEKINQAVF--------PGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 281 ~~~~~~~~~~~~~~--------~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++.+.+..... ....||++...++++.++++++.+
T Consensus 242 ---~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~ 284 (406)
T 3cai_A 242 ---SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAA 284 (406)
T ss_dssp ---HHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHT
T ss_pred ---HHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHH
Confidence 34444332210 012478999999999999988865
No 27
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.92 E-value=2.9e-24 Score=204.06 Aligned_cols=247 Identities=14% Similarity=0.087 Sum_probs=173.8
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC-ccccCCCchHHHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE-KWGGSLSGSPSNFQVY 126 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~-~v~v~~sgs~a~~~~l 126 (356)
.++++++..++++.+++++.+.+... |. ........++++.+++++|++++ ++++++||++++..++
T Consensus 19 ~~~~~~~p~~~~~~v~~a~~~~~~~~----------~~--~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~ 86 (396)
T 2ch1_A 19 KIMMGPGPSNCSKRVLTAMTNTVLSN----------FH--AELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAML 86 (396)
T ss_dssp CBCCSSSSCCCCHHHHHHTTSCCCCT----------TC--HHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHH
T ss_pred ceeecCCCCCCCHHHHHHhccccccC----------CC--hhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHH
Confidence 35666666678899999887654321 11 12234456788999999999887 7778999999999999
Q ss_pred HhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 127 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 127 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
.+++++||+|++++++|.++. +. ..+...|..++.+ +.+ +++.+|+++|++++++.++++|+++ ++| +|
T Consensus 87 ~~~~~~gd~vl~~~~~~~~~~--~~----~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG 157 (396)
T 2ch1_A 87 SNLLEEGDRVLIAVNGIWAER--AV----EMSERYGADVRTI--EGP-PDRPFSLETLARAIELHQPKCLFLTHGDSSSG 157 (396)
T ss_dssp HHHCCTTCEEEEEESSHHHHH--HH----HHHHHTTCEEEEE--ECC-TTSCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHhcCCCCeEEEEcCCcccHH--HH----HHHHHcCCceEEe--cCC-CCCCCCHHHHHHHHHhCCCCEEEEECCCCCCc
Confidence 999999999999997776542 10 1234456666556 444 4567999999999976478999887 666 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhcc-C----C
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK-Q----G 278 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~-~----g 278 (356)
.+.|+++|.++|+++|+++|+|++|+.|..+.++...+ +|++++|+||++++|.| |+++++++...... . +
T Consensus 158 ~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~ 234 (396)
T 2ch1_A 158 LLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWE---IDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSK 234 (396)
T ss_dssp EECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTT---CCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCS
T ss_pred eecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcC---cCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCccc
Confidence 99999999999999999999999999887766554444 89999999999999888 99998874321110 0 0
Q ss_pred cchh-hh-HHHhhccc-cCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 279 KEVF-YD-YEEKINQA-VFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 279 ~~~~-~~-~~~~~~~~-~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
.... .. +...+... ......++++...++++.++++.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 277 (396)
T 2ch1_A 235 VFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAE 277 (396)
T ss_dssp CGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred ceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 0000 00 01111100 00123478899998989899988643
No 28
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.92 E-value=3.3e-25 Score=210.89 Aligned_cols=243 Identities=15% Similarity=0.123 Sum_probs=176.0
Q ss_pred cCCeeecC-CCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHH
Q 018401 47 KGLELIPS-ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 47 ~~i~L~~~-~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~ 125 (356)
+.+-|+.+ ..++|+.|++++.+.+.+.+ +++...+.. .....++.+++++++++++|++++++++++|+++++..+
T Consensus 20 ~~iyld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~ 96 (400)
T 3vax_A 20 HMTYLDAAATTRVDQRVADIVLHWMTAEF--GNAGSRHEY-GIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIA 96 (400)
T ss_dssp --CCCCCCCCSSSCHHHHHHHHHHHHHHH--SCSSCHHHH-HHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHH
T ss_pred CcEEecCCCCCCCCHHHHHHHHHHHHhcc--CCCcccchh-HHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHH
Confidence 44555533 33679999999999887533 233321111 122345567889999999999888888899999999989
Q ss_pred HHhhc----CCCC-eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 018401 126 YTALL----KPHD-RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 126 l~al~----~~gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~- 199 (356)
+.+++ ++|| +|+++.++|+++...+.. +...|.+++.+ +.+ +++.+|+++|++++++ ++++|+++
T Consensus 97 ~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~-----~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~ 167 (400)
T 3vax_A 97 LLGLAPYGERTGRRHIITSAIEHKAVLEPLEH-----LAGRGFEVDFL--TPG-PSGRISVEGVMERLRP-DTLLVSLMH 167 (400)
T ss_dssp HHTTHHHHHHHTCCEEEEETTSCHHHHHHHHH-----HHTTTCEEEEE--CCC-TTCCCCHHHHHTTCCT-TEEEEECCS
T ss_pred HHHHHHhhccCCCCEEEECccccHhHHHHHHH-----HHhcCCeEEEE--ccC-CCCCcCHHHHHHhcCC-CceEEEEEC
Confidence 99887 8999 999999888776543332 12246556555 555 4578999999999987 88999888
Q ss_pred CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEE-EecC-c----
Q 018401 200 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIF-FRKG-V---- 271 (356)
Q Consensus 200 ~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~-~~~~-~---- 271 (356)
++| +|.+.|+++|.++|+++|+++|+|++|+.|..+.++... +|++++|+|| +.||.| |+++ ++++ +
T Consensus 168 ~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~----~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~ 242 (400)
T 3vax_A 168 VNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP----IDMISISGHK-IGAPKGVGALVTRRREEMDDER 242 (400)
T ss_dssp BCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC----CSEEEEETGG-GTSCSSCEEEEECBCSSSTTCB
T ss_pred CCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc----CcEEEEeHHH-hCCCCceEEEEEecchhccccc
Confidence 667 899999999999999999999999999988776554322 6999999999 667877 8888 8762 1
Q ss_pred ---chhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 272 ---KEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 272 ---~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
.+...++.. ......++++...++++.++++.+.+
T Consensus 243 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~a~~~al~~~~~ 280 (400)
T 3vax_A 243 VPLEPIMFGGGQ------------ERKLRPGTLPVPLIMGLAEAAKIFEA 280 (400)
T ss_dssp CCCCCSSCSSCT------------GGGTSCSCCCHHHHHHHHHHHHHHHH
T ss_pred cccCceecCCCc------------eeeeecCCCCHHHHHHHHHHHHHHHh
Confidence 110111110 00112478899999999999988764
No 29
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.92 E-value=2.2e-24 Score=204.24 Aligned_cols=260 Identities=15% Similarity=0.098 Sum_probs=178.1
Q ss_pred cCCeeecCC-CCCcHHHHHHHHhhhhccCCCCCCCC-ccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSE-NFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~-~~~~~~V~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.+.|+.+. .+.|+.|++++.+.+.... ...+.. ..| ........++++.+++++|++++++++++||++++..
T Consensus 16 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~y---~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~ 91 (390)
T 1elu_A 16 NKTYFNFGGQGILPTVALEAITAMYGYLQ-ENGPFSIAAN---QHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDI 91 (390)
T ss_dssp TSEECCTTTCCCCCHHHHHHHHHHHHHHH-HHCSSSHHHH---HHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHH
T ss_pred CeEEecCCccCCCCHHHHHHHHHHHHHHh-ccCCcchhhH---HHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHH
Confidence 346666443 3567889999998876521 001110 011 1112344578899999999988888889999999998
Q ss_pred HHHhh-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 125 VYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 125 ~l~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
++.++ +++||+|+++.++|.++..++.. .+...|.+++.++++.. +++.+|+++|++++++ ++++|+++ ++|
T Consensus 92 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~----~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~n 165 (390)
T 1elu_A 92 VLWGLDWHQGDEILLTDCEHPGIIAIVQA----IAARFGITYRFFPVAAT-LNQGDAAAVLANHLGP-KTRLVILSHLLW 165 (390)
T ss_dssp HHHHSCCCTTCEEEEETTCCHHHHHHHHH----HHHHHCCEEEEECCGGG-SSSSCHHHHHHTTCCT-TEEEEEEESBCT
T ss_pred HHhCCCCCCCCEEEEecCcccHHHHHHHH----HHHHhCcEEEEEcCCCC-CCccchHHHHHHhcCC-CceEEEEecccc
Confidence 99999 89999999999888766432211 12234666655643321 3467899999999986 78999888 666
Q ss_pred -CCCcccHHHHHHHHH----HcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh--
Q 018401 203 -YARLYDYERIRKVCN----KQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI-- 274 (356)
Q Consensus 203 -~g~~~~l~~I~~la~----~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~-- 274 (356)
+|.+.|+++|.++|+ ++|+++|+|++|+.|..+.++...+ +|++++|+|||++||.| |++++++++...
T Consensus 166 ptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~---~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~ 242 (390)
T 1elu_A 166 NTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLE---VDYYAFTGHKWFAGPAGVGGLYIHGDCLGEIN 242 (390)
T ss_dssp TTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSC---CSEEEEESSSTTCCCTTCEEEEECTTTGGGCC
T ss_pred CCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcC---CCEEEccccccccCCCceEEEEECHHhHhhcC
Confidence 899999999999999 9999999999999887766554444 89999999999889888 999998864221
Q ss_pred --ccCCcchhhhHH-Hhhc--cccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 275 --NKQGKEVFYDYE-EKIN--QAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 275 --~~~g~~~~~~~~-~~~~--~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
..++......+. ..+. ........|+++....+++.++++.+.+.
T Consensus 243 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~ 292 (390)
T 1elu_A 243 PTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQ 292 (390)
T ss_dssp CCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred CccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHc
Confidence 111111000000 0000 00001124788888899898999887653
No 30
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.92 E-value=7.9e-24 Score=200.38 Aligned_cols=204 Identities=12% Similarity=0.037 Sum_probs=154.9
Q ss_pred CeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHh
Q 018401 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTA 128 (356)
Q Consensus 49 i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~a 128 (356)
..+.....+++|.+.+++.+.+...+ +++. ......++++++++++++++|++++++++++||++++..++.+
T Consensus 33 ~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~~-----~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~ 105 (397)
T 3f9t_A 33 NIFGSMCSNVLPITRKIVDIFLETNL--GDPG-----LFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRC 105 (397)
T ss_dssp CBCSCSCCCCCTHHHHHHHHHTTCCT--TSGG-----GBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHH
T ss_pred CeEEEecCCCcHHHHHHHHHHHhhcC--CCcc-----cChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHH
Confidence 34445555678899999998886532 1111 1234567778899999999999988888899999999988888
Q ss_pred hcCC-------------CCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 018401 129 LLKP-------------HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 195 (356)
Q Consensus 129 l~~~-------------gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~ 195 (356)
+..+ ||+|+++.++|.++.. .+...|.+++.+ +.+ +++.+|+++|++++++.++++
T Consensus 106 ~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~~~~~~ 174 (397)
T 3f9t_A 106 IKNIWREKRRKGLSKNEHPKIIVPITAHFSFEK--------GREMMDLEYIYA--PIK-EDYTIDEKFVKDAVEDYDVDG 174 (397)
T ss_dssp HHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHH--------HHHHHTCEEEEE--CBC-TTSSBCHHHHHHHHHHSCCCE
T ss_pred HHHHHHhhhhhcccCCCCeEEEECCcchhHHHH--------HHHHcCceeEEE--eeC-CCCcCCHHHHHHHHhhcCCeE
Confidence 8665 9999999988876543 344567666556 455 457899999999998646888
Q ss_pred EEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCC---------CCCCC-CccEEEeCCCCcCCCCCc-
Q 018401 196 IVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI---------PSPFE-YADVVTTTTHKSLRGPRG- 262 (356)
Q Consensus 196 v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~---------~~~l~-~~D~~~~s~~K~l~gp~g- 262 (356)
|+++ ++| +|.+.|+++|.++|++||+++|+|++|+.+..+..-. ...+. ++|++++|+||++++|.+
T Consensus 175 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~~~ 254 (397)
T 3f9t_A 175 IIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPIPS 254 (397)
T ss_dssp EEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCSSC
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCCCCc
Confidence 8887 767 8999999999999999999999999998765532110 11100 489999999999877766
Q ss_pred eEEEEecC
Q 018401 263 AMIFFRKG 270 (356)
Q Consensus 263 G~l~~~~~ 270 (356)
|+++++++
T Consensus 255 g~~~~~~~ 262 (397)
T 3f9t_A 255 GGILFKDI 262 (397)
T ss_dssp EEEEESSG
T ss_pred eEEEEeCH
Confidence 88888764
No 31
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.92 E-value=4.5e-24 Score=201.51 Aligned_cols=235 Identities=17% Similarity=0.224 Sum_probs=169.8
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc----C
Q 018401 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL----K 131 (356)
Q Consensus 56 ~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~----~ 131 (356)
.++|++|++++.+.+.+.+ +.+...+..+ ........++++++++++|++++++++++||++++..++.++. +
T Consensus 11 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~ 87 (384)
T 1eg5_A 11 TRVDDRVLEEMIVFYREKY--GNPNSAHGMG-IEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEK 87 (384)
T ss_dssp CCCCHHHHHHHHHHHHTCC--CCTTCSSHHH-HHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHhcC--CCCccccHHH-HHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccC
Confidence 3679999999999887643 2222211000 1123445578899999999988888889999999998888887 8
Q ss_pred CCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccH
Q 018401 132 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDY 209 (356)
Q Consensus 132 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l 209 (356)
+||+|+++.++|.++..... .+...|.+++.+ +.+ +++.+|+++|++++++ ++++|+++ ++| +|.+.|+
T Consensus 88 ~gd~vl~~~~~~~~~~~~~~-----~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~ 158 (384)
T 1eg5_A 88 RKRTIITTPIEHKAVLETMK-----YLSMKGFKVKYV--PVD-SRGVVKLEELEKLVDE-DTFLVSIMAANNEVGTIQPV 158 (384)
T ss_dssp TCCEEEECTTSCHHHHHHHH-----HHHHTTCEEEEC--CBC-TTSCBCHHHHHHHCCT-TEEEEEEESBCTTTCBBCCH
T ss_pred CCCEEEECCCCchHHHHHHH-----HHHhcCCEEEEE--ccC-CCCccCHHHHHHHhCC-CCeEEEEECCCCCcccccCH
Confidence 99999999988866543221 113346555444 555 4577999999999987 88999887 666 8999999
Q ss_pred HHHHHHHHHcC--CEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCc--chhccCCcchhhh
Q 018401 210 ERIRKVCNKQK--AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--KEINKQGKEVFYD 284 (356)
Q Consensus 210 ~~I~~la~~~g--~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~--~~~~~~g~~~~~~ 284 (356)
++|.++|+++| +++|+|++|+.|..+.++...+ +|++++|+||+ .||.| |++++++++ ...+.++..
T Consensus 159 ~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~---~di~~~s~sK~-~g~~G~G~~~~~~~~~~~~~~~~~~~---- 230 (384)
T 1eg5_A 159 EDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLE---VDYASFSAHKF-HGPKGVGITYIRKGVPIRPLIHGGGQ---- 230 (384)
T ss_dssp HHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTC---CSEEEEEGGGG-TSCTTCEEEEECTTSCCCCSBCSSCT----
T ss_pred HHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcC---CCEEEecHHHh-cCCCceEEEEEcCCCccccccccCcc----
Confidence 99999999999 9999999999876655544333 89999999996 57877 999998753 111111100
Q ss_pred HHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 285 YEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 285 ~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
......++++.+..+++.++++...+
T Consensus 231 --------~~~~~~~~~~~~~~~a~~~al~~~~~ 256 (384)
T 1eg5_A 231 --------ERGLRSGTQNVPGIVGAARAMEIAVE 256 (384)
T ss_dssp --------TTTTBCSCCCHHHHHHHHHHHHHHHH
T ss_pred --------cccccCCCCChHHHHHHHHHHHHHHH
Confidence 00112368888898888889987643
No 32
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.92 E-value=1.1e-24 Score=205.09 Aligned_cols=240 Identities=14% Similarity=0.064 Sum_probs=168.0
Q ss_pred cCCeeec--CCCCCcHHHHHHHHhhhhccCCCCCC--CCccCCCchhHHHHHHHHHHH-HHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIP--SENFTSVSVMQAVGSVMTNKYSEGYP--GARYYGGNEYIDMAESLCQKR-ALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~--~~~~~~~~V~~a~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~-la~~~g~~~~~v~v~~sgs~a 121 (356)
+.+.|.. +..++++.+++++.+.+.......+. ....+.. .....+++++ +++++|++ ++++++|++++
T Consensus 8 ~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~la~~~~~~--~v~~~~g~t~a 81 (371)
T 2e7j_A 8 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIK----TPPIHDFIHNQLPKFLGCD--VARVTNGAREA 81 (371)
T ss_dssp CCEECCHHHHTCCCCHHHHHHHHHC------------------------CCHHHHHHTHHHHHTTSS--EEEEESSHHHH
T ss_pred CcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhH----HHHHHHHHHHHHHHHcCCC--EEEEeCChHHH
Confidence 4566654 35678999999999887652100110 0100111 1223456688 99999988 67779999999
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh----cCCcEEE
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL----FRPKLIV 197 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~----~~~k~v~ 197 (356)
+..++.+++++||+|++++++|.++.. .+...|.+++.++.+.+ +++.+|+++|++++++ .++++|+
T Consensus 82 ~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~v~ 152 (371)
T 2e7j_A 82 KFAVMHSLAKKDAWVVMDENCHYSSYV--------AAERAGLNIALVPKTDY-PDYAITPENFAQTIEETKKRGEVVLAL 152 (371)
T ss_dssp HHHHHHHHCCTTCEEEEETTCCHHHHH--------HHHHTTCEEEEECCCCT-TTCCCCHHHHHHHHHHHTTTSCEEEEE
T ss_pred HHHHHHHHhCCCCEEEEccCcchHHHH--------HHHHcCCeEEEeecccC-CCCCcCHHHHHHHHHhhcccCCeEEEE
Confidence 998999999999999999988876644 23456766665642255 4578999999999973 2788888
Q ss_pred Ec-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchh
Q 018401 198 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 274 (356)
Q Consensus 198 l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 274 (356)
++ ++| +|.+.|+++|.++|++||+++|+|++|+.|..+.++...+ +|++++|+||++++|.+ |++++++++
T Consensus 153 ~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~---~di~~~s~sK~~~~~~~~G~~~~~~~~--- 226 (371)
T 2e7j_A 153 ITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIG---ADFIVGSGHKSMAASGPIGVMGMKEEW--- 226 (371)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHT---CSEEEEEHHHHSSCCSSCEEEEECTTT---
T ss_pred EECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcC---CCEEEecCCcCCCCCCCcEEEEEechh---
Confidence 87 666 8999999999999999999999999999887654332223 79999999999988777 999998853
Q ss_pred ccCCcchhhhHHHh-hccccCC-CC-----CCCCcHHHHHHHHHHHHHHhc
Q 018401 275 NKQGKEVFYDYEEK-INQAVFP-GL-----QGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 275 ~~~g~~~~~~~~~~-~~~~~~~-~~-----~gt~~~~~~~al~~Al~~~~~ 318 (356)
.+. +...... .. .++++...++++.++++++.+
T Consensus 227 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 266 (371)
T 2e7j_A 227 -----------AEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE 266 (371)
T ss_dssp -----------TTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH
T ss_pred -----------hhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH
Confidence 222 2211110 11 467888888888899988765
No 33
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.91 E-value=2.2e-25 Score=210.25 Aligned_cols=258 Identities=10% Similarity=-0.020 Sum_probs=176.1
Q ss_pred cCCCCCcHHHHHHHHhhhhccCCCCCCCCcc--CCCchhHHHHHHHHHHHHHHHcCCCC-Ccccc-CCCchHHHHHHHHh
Q 018401 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARY--YGGNEYIDMAESLCQKRALEAFRLDP-EKWGG-SLSGSPSNFQVYTA 128 (356)
Q Consensus 53 ~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~la~~~g~~~-~~v~v-~~sgs~a~~~~l~a 128 (356)
+...++|++|++++.+.+.+.+ +++.+.+ ........++.+++|+.+++++|+++ .+++| ++|||+++.+++..
T Consensus 19 at~~~~p~~Vl~a~~~~~~~~~--~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~ 96 (377)
T 3e77_A 19 YFQSMLPHSVLLEIQKELLDYK--GVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLN 96 (377)
T ss_dssp ECSCCCCHHHHHHHHHTSSSGG--GSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHhcc--cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHh
Confidence 5666889999999999987644 2322211 01112345566789999999999965 57888 78999999889998
Q ss_pred hcCC--CCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 018401 129 LLKP--HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 204 (356)
Q Consensus 129 l~~~--gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g 204 (356)
++.+ ||+|++...++.+. ++.. .++..|..+..+ +.+ .++..++++++.++++ ++++|.++ .+| +|
T Consensus 97 l~~~~~Gd~v~~~~~g~~~~--~~~~----~a~~~G~~~~~~--~~~-~~~~~~~~~~~~~i~~-~t~lV~~~h~et~tG 166 (377)
T 3e77_A 97 LIGLKAGRCADYVVTGAWSA--KAAE----EAKKFGTINIVH--PKL-GSYTKIPDPSTWNLNP-DASYVYYCANETVHG 166 (377)
T ss_dssp HGGGSTTCEEEECCCSHHHH--HHHH----HHTTTSEEEECS--CCC-SSSCSCCCGGGCCCCT-TCSCEEEESEETTTT
T ss_pred ccCCCCCCeEEEEECCHHHH--HHHH----HHHHhCCceEEe--ccC-CCcCCCCChHHhccCC-CccEEEEeCccCchh
Confidence 8765 99998776555443 2321 122335433333 443 3345566666666766 89998887 333 79
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhh
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFY 283 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~ 283 (356)
.+.|+ +|+++|+++++|++|++|..++++..++ ++++|+|||+ ||+| |++++++++........+.+.
T Consensus 167 ~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~~-----~~~~s~~K~~-gp~G~g~l~~~~~~l~~~~~~~p~~~ 235 (377)
T 3e77_A 167 VEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKFG-----VIFAGAQKNV-GSAGVTVVIVRDDLLGFALRECPSVL 235 (377)
T ss_dssp EECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGCS-----EEEEEGGGTT-SCTTCEEEEEETTSCSCCCTTSCGGG
T ss_pred eEchh-----hhccCCCEEEEEcccccCCCCCchhhcC-----EEEEeccccc-CCCccEEEEEcHHHHhhccCCCCchh
Confidence 99998 4788999999999999999999887654 6899999998 7999 999999975322111111111
Q ss_pred hHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHH
Q 018401 284 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAF 336 (356)
Q Consensus 284 ~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~ 336 (356)
++..... .....|||++++++++.+|++++.+..++++++++...+...+
T Consensus 236 ~~~~~~~---~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l 285 (377)
T 3e77_A 236 EYKVQAG---NSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTI 285 (377)
T ss_dssp CHHHHHT---TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred hHHHHhh---cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 2222111 1234689999999999999999988646666665544443333
No 34
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.91 E-value=1.4e-23 Score=198.30 Aligned_cols=246 Identities=13% Similarity=0.108 Sum_probs=168.0
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC----CCCccccCCCchHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL----DPEKWGGSLSGSPSN 122 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~----~~~~v~v~~sgs~a~ 122 (356)
+.+.+.+++..+++.|++++.+.+.. + ++ ........+++++++++++. +++++++++||++++
T Consensus 5 ~~~~~~p~p~~~~~~v~~a~~~~~~~-~--~~---------~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al 72 (385)
T 2bkw_A 5 VDTLLIPGPIILSGAVQKALDVPSLG-H--TS---------PEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGW 72 (385)
T ss_dssp CCEECSSSSCCCCHHHHHTTSCCCCC-T--TS---------HHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHH
T ss_pred cceeecCCCcCchHHHHHHHhccccc-c--CC---------HHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHH
Confidence 35677888888899999988765432 1 11 11122233456677777665 456777899999999
Q ss_pred HHHHHhhc---CCCCeeeecCCC-CCcccCcccccccccccccceeeEEEeccc-CCCCCCCCHHHHHHHhhhcCCcEEE
Q 018401 123 FQVYTALL---KPHDRIMALDLP-HGGHLSHGYQTDTKKISAVSIFFETMPYRL-NESTGYIDYDQLEKSATLFRPKLIV 197 (356)
Q Consensus 123 ~~~l~al~---~~gd~Vl~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~d~~~l~~~i~~~~~k~v~ 197 (356)
..++.++. ++||+|++++.. ++... ...+...|.+++.+ +. + +++.+|+++|++++++.++++|+
T Consensus 73 ~~~~~~~~~~~~~gd~vlv~~~~~~~~~~-------~~~~~~~g~~~~~v--~~~~-~~~~~d~~~l~~~l~~~~~~~v~ 142 (385)
T 2bkw_A 73 DIFASNFILSKAPNKNVLVVSTGTFSDRF-------ADCLRSYGAQVDVV--RPLK-IGESVPLELITEKLSQNSYGAVT 142 (385)
T ss_dssp HHHHHHHSCTTCSCCEEEEECSSHHHHHH-------HHHHHHTTCEEEEE--CCSS-TTSCCCHHHHHHHHHHSCCSEEE
T ss_pred HHHHHHHhccCCCCCeEEEEcCCcchHHH-------HHHHHHcCCceEEE--ecCC-CCCCCCHHHHHHHHhcCCCCEEE
Confidence 98999887 899999887432 21110 01233456666555 44 4 45779999999999764789998
Q ss_pred Ec-CCC-CCCcccHHHHHHHHHHc--CCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcc
Q 018401 198 AG-ASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 272 (356)
Q Consensus 198 l~-~~n-~g~~~~l~~I~~la~~~--g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~ 272 (356)
++ ++| +|.+.|+++|.++|+++ |+++|+|++|+.|..+.++...+ +|++++|+||+++||.| |+++++++..
T Consensus 143 ~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~~~~~~G~G~~~~~~~~~ 219 (385)
T 2bkw_A 143 VTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWG---VDFALTASQKAIGAPAGLSISLCSSRFM 219 (385)
T ss_dssp EESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTT---CSEEEEESSSTTCCCSCEEEEEECHHHH
T ss_pred EEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccC---ceEEEecCccccccCCcceEEEEcHHHH
Confidence 87 566 89999999999999999 99999999999887765554444 89999999999999989 9999987531
Q ss_pred h-hc-------cCCcch-hhhHHH---hhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 273 E-IN-------KQGKEV-FYDYEE---KINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 273 ~-~~-------~~g~~~-~~~~~~---~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
. .+ ..+... ...+.. .+... .....++++...++++.++++.+.+
T Consensus 220 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~~~~ 276 (385)
T 2bkw_A 220 DYALNDSKNGHVHGYFSSLRRWTPIMENYEAG-KGAYFATPPVQLINSLDVALKEILE 276 (385)
T ss_dssp HHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTT-CCCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhccCCCCCceeecHHHHhhHHHhhhcc-CCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 1 11 000000 000111 11110 0112378999999999999988764
No 35
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.91 E-value=7.8e-24 Score=198.39 Aligned_cols=247 Identities=15% Similarity=0.096 Sum_probs=167.3
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC--CCccccCCCchHHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~--~~~v~v~~sgs~a~~~~ 125 (356)
.+++++++..++++|++++.+.+.. +++ ........++++++++++|.+ ++++++++||++++..+
T Consensus 5 ~~~~~~gp~~~~~~v~~a~~~~~~~----------~~~--~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~ 72 (366)
T 1m32_A 5 YLLLTPGPLTTSRTVKEAMLFDSCT----------WDD--DYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAV 72 (366)
T ss_dssp CEECSSSSCCCCHHHHHTTCCCCCT----------TSH--HHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHH
T ss_pred cccccCCCcCCCHHHHHHHhhhhcC----------CCH--HHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHH
Confidence 5788888777899999998764311 010 001023345678899999942 23577799999999999
Q ss_pred HHhhcCCCCeeeecC-CCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc-CCcEEEEc-CCC
Q 018401 126 YTALLKPHDRIMALD-LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-RPKLIVAG-ASA 202 (356)
Q Consensus 126 l~al~~~gd~Vl~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~-~~k~v~l~-~~n 202 (356)
+.+++++||+|++.+ +.|++.+ ...+...|.+++.+ +.+ +++.+|+++|++++++. ++++|+++ ++|
T Consensus 73 ~~~~~~~gd~vi~~~~~~~~~~~-------~~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~n 142 (366)
T 1m32_A 73 LGSALGPQDKVLIVSNGAYGARM-------VEMAGLMGIAHHAY--DCG-EVARPDVQAIDAILNADPTISHIAMVHSET 142 (366)
T ss_dssp HHHSCCTTCCEEEEESSHHHHHH-------HHHHHHHTCCEEEE--ECC-TTSCCCHHHHHHHHHHCTTCCEEEEESEET
T ss_pred HHHhcCCCCeEEEEeCCCccHHH-------HHHHHHhCCceEEE--eCC-CCCCCCHHHHHHHHhcCCCeEEEEEecccC
Confidence 999999999988765 4444321 11223456666556 444 45679999999999863 47888776 555
Q ss_pred -CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCC-c
Q 018401 203 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQG-K 279 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g-~ 279 (356)
+|.+.|+++|.++|++||+++|+|++|+.|..+.++...+ +|++++|+||+++||.| |++++++++...+... .
T Consensus 143 ptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~---~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~ 219 (366)
T 1m32_A 143 TTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALH---IDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSR 219 (366)
T ss_dssp TTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTT---CSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCS
T ss_pred CcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccccC---ccEEEecCcccccCCCceEEEEECHHHHHhhcCCCC
Confidence 7999999999999999999999999999887765554444 89999999999989988 9999988532111110 0
Q ss_pred chhhhHHHhhcc--ccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 280 EVFYDYEEKINQ--AVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 280 ~~~~~~~~~~~~--~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
...++....+.. .......++++...++++.++++.+.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 261 (366)
T 1m32_A 220 SLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKE 261 (366)
T ss_dssp CSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 000011000000 0001123588899999999999887653
No 36
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.91 E-value=4.3e-25 Score=214.89 Aligned_cols=230 Identities=11% Similarity=0.045 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCe---eeecCCCCCcccCcccccccccccccceeeEE--
Q 018401 93 AESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDR---IMALDLPHGGHLSHGYQTDTKKISAVSIFFET-- 167 (356)
Q Consensus 93 l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~---Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-- 167 (356)
+.+++++++++++|++++++++++|+++++..++.++++|||. |++..++|++...++... +...|.++..
T Consensus 112 ~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~----~~~~G~~~~~~~ 187 (465)
T 3e9k_A 112 GDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQ----LQLHGLNIEESM 187 (465)
T ss_dssp TTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHH----HHHTTCCHHHHE
T ss_pred hHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHH----HHHcCCcceeee
Confidence 3456779999999999888888999999999899999877666 999999997755433311 1223433210
Q ss_pred Eec-ccCCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCC
Q 018401 168 MPY-RLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 242 (356)
Q Consensus 168 v~~-~~~~~~~~~d~~~l~~~i~~--~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~ 242 (356)
+.+ +.+ +++.+|+++|++++.+ .++++|+++ ++| +|.+.|+++|.++|++||+++|+|++|+.|..+.++..++
T Consensus 188 v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~ 266 (465)
T 3e9k_A 188 RMIKPRE-GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWG 266 (465)
T ss_dssp EEECCCT-TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHT
T ss_pred EEEecCC-CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcC
Confidence 111 233 4578899999999973 278899888 777 8999999999999999999999999999998887665555
Q ss_pred CCCccEEEeCCCCcCC-CCCc-eEEEEecCcchh---ccCCcchhhhHHHhhc--c--ccCC----CCCCCCcHHHHHHH
Q 018401 243 FEYADVVTTTTHKSLR-GPRG-AMIFFRKGVKEI---NKQGKEVFYDYEEKIN--Q--AVFP----GLQGGPHNHTITGL 309 (356)
Q Consensus 243 l~~~D~~~~s~~K~l~-gp~g-G~l~~~~~~~~~---~~~g~~~~~~~~~~~~--~--~~~~----~~~gt~~~~~~~al 309 (356)
+|++++|+||+++ ||.| |++++++++... ...|+... .....+. . ...+ ...||+++..++++
T Consensus 267 ---~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~ 342 (465)
T 3e9k_A 267 ---VDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGH-ELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSL 342 (465)
T ss_dssp ---CCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGB-CHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHH
T ss_pred ---CCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCC-CCCcccccCCCcCcCCChHHhccCCccHHHHHHH
Confidence 8999999999994 7888 999998865221 12222110 1111111 0 0001 12389999999999
Q ss_pred HHHHHHHhcccccchhhcccccc
Q 018401 310 AVALKQVCTLITFSHIHVFSLHV 332 (356)
Q Consensus 310 ~~Al~~~~~~~~~~~~~~~~~~~ 332 (356)
.+|++.+.+. ++++++++....
T Consensus 343 ~aal~~~~~~-~~~~~~~~~~~~ 364 (465)
T 3e9k_A 343 HASLEIFKQA-TMKALRKKSVLL 364 (465)
T ss_dssp HHHHHHHHHH-CHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CHHHHHHHHHHH
Confidence 9999998763 455555544433
No 37
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.91 E-value=5.7e-26 Score=215.35 Aligned_cols=262 Identities=9% Similarity=0.009 Sum_probs=167.2
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCC--chhHHHHHHHHHHHHHHHcCCCC-Ccccc-CCCchHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG--NEYIDMAESLCQKRALEAFRLDP-EKWGG-SLSGSPSN 122 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~la~~~g~~~-~~v~v-~~sgs~a~ 122 (356)
....+++++.++|++|++++.+.+.+.+ +++.+.+..+ .....++.+++|+.+++++|++. .+|+| ++|||+++
T Consensus 27 ~~yl~~agpt~~p~~V~~a~~~~~~~~~--~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~ 104 (386)
T 3qm2_A 27 QVFNFSSGPAMLPAEVLKLAQQELCDWH--GLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQF 104 (386)
T ss_dssp CCEECCSSSCCCCHHHHHHHTCC-------------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHH
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHhcc--ccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHH
Confidence 3567789999999999999999886633 3332211000 11123444578999999999954 47888 79999999
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCC-CCHHHHHHHhhhcCCcEEEEc-C
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY-IDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
.+++..++++||+|++...++.++ ++... ++..| .+..++.+. .+.+. ++++++++++.+ +|++|.++ .
T Consensus 105 n~ai~~l~~~gd~v~~~~~~~~~~--~~~~~----a~~~G-~v~~v~~~~-~~~G~~~~~~~~~~~l~~-~t~lV~~~h~ 175 (386)
T 3qm2_A 105 AGVPLNLLGDKTTADYVDAGYWAA--SAIKE----AKKYC-APQIIDAKI-TVDGKRAVKPMREWQLSD-NAAYLHYCPN 175 (386)
T ss_dssp HHHHHHHCTTCCEEEEEESSHHHH--HHHHH----HTTTS-EEEEEECEE-EETTEEEECCGGGCCCCT-TCSCEEECSE
T ss_pred HHHHHhccCCCCeEEEEeCCHHHH--HHHHH----HHHhC-CeEEEecCc-ccCCCCCCchHHHhhcCC-CCcEEEEECC
Confidence 889999999999987665444443 33211 22235 566665431 01233 677777777776 89998887 3
Q ss_pred CC-CCCc-ccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccC
Q 018401 201 SA-YARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ 277 (356)
Q Consensus 201 ~n-~g~~-~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~ 277 (356)
++ +|.+ .|+++|. +|+++++|++|++|.+++++..+ |++++|+|||+ ||+| |++++++++......
T Consensus 176 et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~-----~~~~~s~hK~l-GP~G~g~l~v~~~~~~~~~~ 244 (386)
T 3qm2_A 176 ETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRY-----GVIYAGAQKNI-GPAGLTLVIVREDLLGKAHE 244 (386)
T ss_dssp ETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGC-----SEEEEETTTTT-CCTTEEEEEEEGGGCSCCCT
T ss_pred cCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCcccc-----CEEEEeccccc-CCCccEEEEECHHHHhhhcc
Confidence 33 6985 8898885 79999999999999999998765 46789999998 7999 999999875321111
Q ss_pred CcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccch
Q 018401 278 GKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVY 333 (356)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~ 333 (356)
..+.+.++..... ...++||||+++++++.+|++++.+..++++++++...+.
T Consensus 245 ~~p~~~~~~~~~~---~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~ 297 (386)
T 3qm2_A 245 SCPSILDYTVLND---NDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKA 297 (386)
T ss_dssp TSCGGGCHHHHHH---C-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHhh---cCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 1111112111111 1234589999999999999999987545666555444443
No 38
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.91 E-value=1.6e-23 Score=198.76 Aligned_cols=258 Identities=14% Similarity=0.057 Sum_probs=178.5
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la 102 (356)
++...+++..+..+.+..+..++.|+|..+++. +++.+.+++.+.+.... .+| +...+..++++++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~l~~~la~~~~ 77 (389)
T 1gd9_A 5 DRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGL-THY------GPNIGLLELREAIAEKLK 77 (389)
T ss_dssp HHHHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CSC------CCTTCCHHHHHHHHHHHH
T ss_pred hHhHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCCC-CCC------CCCCCcHHHHHHHHHHHH
Confidence 344555566555555543332467888877764 57899999998886521 122 222345678888888888
Q ss_pred HHcCC--CCCc-cccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCC
Q 018401 103 EAFRL--DPEK-WGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGY 178 (356)
Q Consensus 103 ~~~g~--~~~~-v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~ 178 (356)
+.+|. ++++ +++++||++++..++.+++++||+|++++++|.++.. .+...|.+++.++ .+. +++.
T Consensus 78 ~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~ 147 (389)
T 1gd9_A 78 KQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAP--------AVILAGGKPVEVP--TYEEDEFR 147 (389)
T ss_dssp HHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHH--------HHHHHTCEEEEEE--CCGGGTTC
T ss_pred HHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCCEEEEec--cCCccCCC
Confidence 87784 6777 8889999999998999999999999999988876532 3445676666564 432 2357
Q ss_pred CCHHHHHHHhhhcCCcEEEEc-CCC-CCCcc---cHHHHHHHHHHcCCEEEEeccchhhhccc----CCCCCC-CCCccE
Q 018401 179 IDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSP-FEYADV 248 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~~-l~~~D~ 248 (356)
+|+++|++++++ ++++|+++ ++| +|.+. ++++|.++|++||+++|+|++|+.+.... .+.... ..+.|+
T Consensus 148 ~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (389)
T 1gd9_A 148 LNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTI 226 (389)
T ss_dssp CCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEE
T ss_pred CCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEE
Confidence 899999999986 78988887 777 88776 48899999999999999999998665421 111111 124789
Q ss_pred EEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 249 VTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 249 ~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
++.|+||+++.| +.|++++++ ++.+.+..... ...++.+.+..+++.++++.
T Consensus 227 ~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~-~~~~~~~~~~~~a~~~~l~~ 280 (389)
T 1gd9_A 227 TVNGFSKTFAMTGWRLGFVAAPS--------------WIIERMVKFQM-YNATCPVTFIQYAAAKALKD 280 (389)
T ss_dssp EEEESTTTTTCGGGCCEEEECCH--------------HHHHHHHHHHT-TTTCSCCHHHHHHHHHHHTC
T ss_pred EEecChhhcCCcccceEEEEECH--------------HHHHHHHHHHh-hhccCCCHHHHHHHHHHHhC
Confidence 999999987422 238998876 45554443221 12245566666666677754
No 39
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.91 E-value=3.9e-24 Score=205.79 Aligned_cols=250 Identities=15% Similarity=0.117 Sum_probs=163.0
Q ss_pred cCCeeecCCC-CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHH
Q 018401 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 47 ~~i~L~~~~~-~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~ 125 (356)
+.+.|+.+.+ ++|+.|++++.+.+...+ +|+...| .......+..+++++++++++|++++++++++|+++++..+
T Consensus 18 ~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~ 94 (432)
T 3a9z_A 18 RKVYMDYNATTPLEPEVIQAVTEAMKEAW--GNPSSSY-VAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLV 94 (432)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHHCC--SCTTCSS-HHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHH
T ss_pred CcEEeeCCccCCCCHHHHHHHHHHHHHhc--CCCccCc-HHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHH
Confidence 4566665544 678999999999887533 4554322 11122344556788999999999888888899999999988
Q ss_pred HHhhc--------CCCCeeeecCCCCCcccCccc-----cc----ccccccccceeeEEEecccCCCCCCCCHHHHHHHh
Q 018401 126 YTALL--------KPHDRIMALDLPHGGHLSHGY-----QT----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 188 (356)
Q Consensus 126 l~al~--------~~gd~Vl~~~~~~~~~~~~~~-----~~----~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i 188 (356)
+.+++ ++||+|+++.+.|..+..... .. ........|.+++.+ +.+.+++.+|+++|++++
T Consensus 95 ~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v--~~~~~~~~~d~~~l~~~i 172 (432)
T 3a9z_A 95 IHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFV--PVSKVNGQVEVEDILAAV 172 (432)
T ss_dssp HHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEE--CCCTTTSSCCHHHHHHTC
T ss_pred HHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEE--ecCcccCCcCHHHHHHhc
Confidence 88875 589988888866653310000 00 000112246566555 454335679999999999
Q ss_pred hhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcC----------CEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCc
Q 018401 189 TLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQK----------AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 256 (356)
Q Consensus 189 ~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g----------~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~ 256 (356)
++ ++++|+++ ++| +|.+.|+++|.++|+++| +++|+|++|+.|..+.++... ++|++++|+||+
T Consensus 173 ~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~---~~d~~~~s~~K~ 248 (432)
T 3a9z_A 173 RP-TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDL---GVDFLTIVGHKF 248 (432)
T ss_dssp CT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHH---CCSEEEEEGGGT
T ss_pred cC-CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhc---CCCEEEEehhHh
Confidence 86 78999888 666 899999999999999999 999999999887654443222 389999999997
Q ss_pred CCCCCceEEEEecCc-ch-h---ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 257 LRGPRGAMIFFRKGV-KE-I---NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 257 l~gp~gG~l~~~~~~-~~-~---~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
+ ||+.|+++++++. .. . ..+|+. . .....|+++.+.++++.+|++.+.+
T Consensus 249 ~-g~~~G~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~~a~~aal~~~~~ 302 (432)
T 3a9z_A 249 Y-GPRIGALYVRGVGKLTPLYPMLFGGGQ---E---------RNFRPGTENTPMIAGLGKAADLVSE 302 (432)
T ss_dssp T-CCSCEEEEETTBTTTBCCCCSCCSSCG---G---------GGTSCSCCCHHHHHHHHHHHHHHHH
T ss_pred c-CCcceEEEEccccccCCcCceeecCCc---c---------ccccCCCcCHHHHHHHHHHHHHHHh
Confidence 6 6777999998742 10 0 111110 0 0112378899999999899987754
No 40
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.90 E-value=5.4e-24 Score=199.99 Aligned_cols=259 Identities=10% Similarity=0.030 Sum_probs=173.3
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCc--hhHHHHHHHHHHHHHHHcCCC-CCcccc-CCCchHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGN--EYIDMAESLCQKRALEAFRLD-PEKWGG-SLSGSPSN 122 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~la~~~g~~-~~~v~v-~~sgs~a~ 122 (356)
..++|++++.++|++|++++.+.+.+.+ +++.+.+..++ ....++.+++|+.+++++|++ +.+++| |+|||+++
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~--~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~ 82 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQ--GRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQF 82 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGG--GSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhcc--cCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHH
Confidence 4678999999999999999999887633 33333221111 234556678999999999996 457888 99999999
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCC--CCHHHHHHHhhhcCCcEEEEc-
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY--IDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~--~d~~~l~~~i~~~~~k~v~l~- 199 (356)
.+++..++ +||++++....+.++ ++.. .++..|..++.++ .+ .++. +++++ + +++ ++++|.++
T Consensus 83 n~~~~~~~-~~~~~~~i~~~~~~~--~~~~----~a~~~G~~v~~~~--~~-~~g~~~~~~~~-~--l~~-~t~lv~~~~ 148 (361)
T 3m5u_A 83 AMIPMNLA-LNGVCEYANTGVWTK--KAIK----EAQILGVNVKTVA--SS-EESNFDHIPRV-E--FSD-NADYAYICS 148 (361)
T ss_dssp HHHHHHHC-CSSCEEEEECSHHHH--HHHH----HHHHTTCCEEEEE--EC-TTTTSCSCCCC-C--CCT-TSSEEEEES
T ss_pred HHHHHhcC-CCCeEEEEeCCHHHH--HHHH----HHHHcCCceEEEe--cc-cCcCCCcCChh-h--cCC-CCCEEEEeC
Confidence 98999888 888763322212122 2221 1223466666664 33 2232 45555 3 776 89999887
Q ss_pred CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhc-c
Q 018401 200 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-K 276 (356)
Q Consensus 200 ~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~-~ 276 (356)
.++ +|.+.|. +++ +|+++++|++|++|..++++.. +|++++|+|||+ ||+| |++++++++.... +
T Consensus 149 ~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~~~-----~d~~~~s~~K~~-gp~G~g~l~~~~~~~~~~~~ 216 (361)
T 3m5u_A 149 NNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDFSN-----IALFYGGVQKNA-GISGLSCIFIRKDMLERSKN 216 (361)
T ss_dssp EETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCCTT-----EEEEEEETTTTS-SCTTCEEEEEEHHHHHHHHT
T ss_pred CCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCccc-----CCEEEEechhcc-CCCccEEEEEcHHHHhhhcC
Confidence 333 6977662 344 4999999999999999988763 799999999998 7999 9999998653221 1
Q ss_pred CCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcccccchHHH
Q 018401 277 QGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAF 336 (356)
Q Consensus 277 ~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~~~~~~~~~ 336 (356)
...+...++..... ...++||||+++++++.+|++++.+..++++++++...+...+
T Consensus 217 ~~~p~~~~~~~~~~---~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l 273 (361)
T 3m5u_A 217 KQIPSMLNYLTHAE---NQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATML 273 (361)
T ss_dssp CCCCGGGCHHHHHH---TTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred CCCCceeehHHHhh---cCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 01111112221111 1234589999999999999999988646776665544444333
No 41
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.90 E-value=1.1e-23 Score=197.23 Aligned_cols=248 Identities=10% Similarity=-0.010 Sum_probs=171.8
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchHHHHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~a~~~~ 125 (356)
+.+++++++..+|+.|++++.+.+.+... ++.. ......++.+++++++++++|++ ++++++++|+++++.++
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~ 77 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKIG-VISH-----RSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERI 77 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTTT-TSCT-----TSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHH
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCcc-CcCC-----CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHH
Confidence 35788888888999999999888765320 1111 11234466678899999999984 56777799999999999
Q ss_pred HHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-C
Q 018401 126 YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-Y 203 (356)
Q Consensus 126 l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~ 203 (356)
+++++++ .+++....|.+. .+. ..+...|.+++.++ .+ +++.+|+++|+ +++ ++++|+++ ++| +
T Consensus 78 ~~~l~~~--~~i~~~~~~~~~--~~~----~~~~~~g~~~~~v~--~~-~~~~~d~~~l~--~~~-~~~~v~~~~~~npt 143 (362)
T 3ffr_A 78 IQNCVEK--KSFHCVNGSFSK--RFY----EFAGELGREAYKEE--AA-FGKGFYPADIT--VPA-DAEIICLTHNETSS 143 (362)
T ss_dssp HHHHCSS--EEEEEECSHHHH--HHH----HHHHHTTCEEEEEE--CC-TTCCCCGGGCC--CCT-TCCEEEEESEETTT
T ss_pred HHhccCC--cEEEEcCcHHHH--HHH----HHHHHhCCCeEEEe--cC-CCCCCCHHHHh--ccC-CccEEEEEcCCCCc
Confidence 9999888 444444333221 111 12234466666664 44 45688999988 555 89999998 666 8
Q ss_pred CCcccHHHHHHHHHHc-CCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcch----hccC
Q 018401 204 ARLYDYERIRKVCNKQ-KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE----INKQ 277 (356)
Q Consensus 204 g~~~~l~~I~~la~~~-g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~----~~~~ 277 (356)
|.+.|+++|.++|++| |+++|+|++|+.|..+.++.. +|++++|+||+++||.| |++++++++.. ...+
T Consensus 144 G~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~-----~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~g 218 (362)
T 3ffr_A 144 GVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWTK-----IDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAK 218 (362)
T ss_dssp TEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTTS-----CSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHT
T ss_pred ceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChhH-----CcEEEEecccccCCCCceEEEEECHHHHHHhhhcccc
Confidence 9999999999999999 999999999998876654322 79999999999988888 99888875421 1222
Q ss_pred Ccc-hh-hhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 278 GKE-VF-YDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 278 g~~-~~-~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
|+. .+ +++.............++++...++++.++++.+.+.
T Consensus 219 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 262 (362)
T 3ffr_A 219 RKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQI 262 (362)
T ss_dssp TCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHc
Confidence 221 11 1222222221112235899999999999999877653
No 42
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.89 E-value=6.8e-23 Score=194.69 Aligned_cols=231 Identities=12% Similarity=0.062 Sum_probs=161.2
Q ss_pred hhhcccccccChHHHHHHHHHHHH----HHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHH
Q 018401 21 KQLNAPLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 94 (356)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 94 (356)
.|+.+++..+.+..+..+...... .++.|+|..+++. +++.+.+++.+.+.... .+| +...+..+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~lr 84 (389)
T 1o4s_A 12 HMVSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGE-VKY------TDPRGIYELR 84 (389)
T ss_dssp --CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCC-CCC------CCTTCCHHHH
T ss_pred HHHHHHHhhcCccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCCCHHHH
Confidence 344555555555443333333222 2357888877764 57899999998886521 122 2223457788
Q ss_pred HHHHHHHHHHcCC--CCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEeccc
Q 018401 95 SLCQKRALEAFRL--DPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 172 (356)
Q Consensus 95 ~~~~~~la~~~g~--~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 172 (356)
+++.+++.+.+|+ +++++++++|+++++..++.+++++||+|++++++|.++.. .+...|..++.++ .
T Consensus 85 ~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~ 154 (389)
T 1o4s_A 85 EGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIP--------QIILAGGTVNVVE--T 154 (389)
T ss_dssp HHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--C
T ss_pred HHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEe--c
Confidence 8888888887786 67778789999999998999999999999999988766543 3445676665564 4
Q ss_pred CC-CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc---CCCCCC-
Q 018401 173 NE-STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA---GVIPSP- 242 (356)
Q Consensus 173 ~~-~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~---~~~~~~- 242 (356)
+. +++.+|+++|++++++ ++++|+++ ++| +|.+.| +++|.++|+++|+++|+|++|+.+.... .+....
T Consensus 155 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~ 233 (389)
T 1o4s_A 155 FMSKNFQPSLEEVEGLLVG-KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSE 233 (389)
T ss_dssp CGGGTTCCCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCS
T ss_pred CCccCCCCCHHHHHHhccc-CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCC
Confidence 42 2457899999999986 78988887 777 887766 8999999999999999999998654321 111110
Q ss_pred CCCccEEEeCCCCcCCCCC--ceEEEEec
Q 018401 243 FEYADVVTTTTHKSLRGPR--GAMIFFRK 269 (356)
Q Consensus 243 l~~~D~~~~s~~K~l~gp~--gG~l~~~~ 269 (356)
..+.|++++|+||+++.|. .|++++++
T Consensus 234 ~~~~~i~~~s~sK~~~~~G~r~G~l~~~~ 262 (389)
T 1o4s_A 234 GFDRIVYINGFSKSHSMTGWRVGYLISSE 262 (389)
T ss_dssp SSTTEEEEEESTTTTTCGGGCCEEEECCH
T ss_pred CCCcEEEEeechhhcCCcccceEEEEeCH
Confidence 1247999999999884232 38998876
No 43
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.89 E-value=4.4e-23 Score=195.21 Aligned_cols=255 Identities=14% Similarity=0.112 Sum_probs=173.8
Q ss_pred cccccccChHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHH
Q 018401 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (356)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 101 (356)
++++..+.++.+..+.+.. ...+.|+|..+++. +++.+.+++.+.+.. ...|+.. .+..+ +++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~------~~~~~----l~~~l 70 (381)
T 1v2d_A 4 HPRTEAAKESIFPRMSGLA-QRLGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQYAPP------AGLPA----LREAL 70 (381)
T ss_dssp CGGGGGC---CHHHHHHHH-HHHTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCSCCCT------TCCHH----HHHHH
T ss_pred hhhhhhcCccHHHHHHHHH-hcCCeEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCCC------CCCHH----HHHHH
Confidence 4566667777777776653 34678899877764 578999999988764 1123221 22334 44788
Q ss_pred HHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCH
Q 018401 102 LEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 181 (356)
Q Consensus 102 a~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~ 181 (356)
+++++++++++++++||++++..++.+++++||+|++++++|.++.. .+...|.+++.++.+..++++.+|+
T Consensus 71 a~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~d~ 142 (381)
T 1v2d_A 71 AEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP--------DAFLAGAKARLVRLDLTPEGFRLDL 142 (381)
T ss_dssp HHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEEETTEEECCH
T ss_pred HHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEeCCCCCccCCcCH
Confidence 88899988888889999999998999999999999999988866542 3345566666564321023467899
Q ss_pred HHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhc---ccCCCCCCCCCccEEEeCC
Q 018401 182 DQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLV---AAGVIPSPFEYADVVTTTT 253 (356)
Q Consensus 182 ~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~---~~~~~~~~l~~~D~~~~s~ 253 (356)
++|++++++ ++++|+++ ++| +|.+.+ +++|.++|++||+++|+|++|+.+.. +..+... ..+.|++++|+
T Consensus 143 ~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~-~~~~~~~~~s~ 220 (381)
T 1v2d_A 143 SALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF-APERTFTVGSA 220 (381)
T ss_dssp HHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH-CTTTEEEEEEH
T ss_pred HHHHHhcCc-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHh-cCCCEEEEeec
Confidence 999999876 78999887 777 887765 88999999999999999999975432 1111110 12489999999
Q ss_pred CCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 254 HKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 254 ~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
||+++.| +.|+++++++ +.+.+.... .....+++.+..+++.++++..
T Consensus 221 sK~~~~~G~r~G~~~~~~~--------------~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~ 270 (381)
T 1v2d_A 221 GKRLEATGYRVGWIVGPKE--------------FMPRLAGMR-QWTSFSAPTPLQAGVAEALKLA 270 (381)
T ss_dssp HHHTTCGGGCCEEEECCTT--------------THHHHHHHH-HHHTSSCCHHHHHHHHHHHHHH
T ss_pred hhhcCCcccceEEEEeCHH--------------HHHHHHHHH-hhcccCCCcHHHHHHHHHHhCc
Confidence 9987433 3489988774 333222110 0012355667777777888765
No 44
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.89 E-value=1.2e-22 Score=192.58 Aligned_cols=259 Identities=11% Similarity=0.126 Sum_probs=179.6
Q ss_pred cccccccChHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHH
Q 018401 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (356)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 101 (356)
++++..+++.++..+.+.. ...+.|+|..+.+. +++.+.+++.+.+... ..+|+ ...+..++++++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~------~~~g~~~l~~~la~~l 80 (386)
T 1u08_A 9 QSKLPQLGTTIFTQMSALA-QQHQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYA------PMTGVQALREAIAQKT 80 (386)
T ss_dssp CCSCCCCCCCHHHHHHHHH-HHTTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCC------CTTCCHHHHHHHHHHH
T ss_pred chhhhcCCccHHHHHHHHH-hcCCeEEecCCCCCCCCCHHHHHHHHHHHHhh-ccCCC------CCCCCHHHHHHHHHHH
Confidence 5667778888888776653 33567898877653 5799999999888652 11232 2234567888888888
Q ss_pred HHHcCC--CCC-ccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCC
Q 018401 102 LEAFRL--DPE-KWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 178 (356)
Q Consensus 102 a~~~g~--~~~-~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 178 (356)
++.+|. +++ ++++++|+++++..++.+++++||+|+++.++|.++.. .+...|.++..+ +.+.+++.
T Consensus 81 ~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v--~~~~~~~~ 150 (386)
T 1u08_A 81 ERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAP--------AIALSGGIVKRM--ALQPPHFR 150 (386)
T ss_dssp HHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEE--ECCTTTCC
T ss_pred HHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEe--ecCcccCc
Confidence 888885 566 78889999999998999999999999999988776532 334556666555 45433467
Q ss_pred CCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc----CCCCCC-CCCccE
Q 018401 179 IDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSP-FEYADV 248 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~~-l~~~D~ 248 (356)
+|+++|++++.+ ++++|+++ ++| +|.+.+ +++|.++|++||+++|+|++|+...... .+.... ..+.|+
T Consensus 151 ~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i 229 (386)
T 1u08_A 151 VDWQEFAALLSE-RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAV 229 (386)
T ss_dssp CCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEE
T ss_pred CCHHHHHHhhcc-cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEE
Confidence 999999999976 78999887 777 887765 6889999999999999999997532211 111110 014789
Q ss_pred EEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 249 VTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 249 ~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
++.|+||+++.| +.|++++++ ++.+.+...... ...+.+.+..+++.++++..
T Consensus 230 ~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~~-~~~~~~~~~~~a~~~~l~~~ 284 (386)
T 1u08_A 230 AVSSFGKTYHMTGWKVGYCVAPA--------------PISAEIRKVHQY-LTFSVNTPAQLALADMLRAE 284 (386)
T ss_dssp EEEEHHHHTTCGGGCCEEEECCH--------------HHHHHHHHHHHH-HTSSCCHHHHHHHHHHHHHC
T ss_pred EEecchhhcCCcccceEEEEcCH--------------HHHHHHHHHHHh-hccCCChHHHHHHHHHHhCC
Confidence 999999987533 238988876 344433321100 12344556666777777653
No 45
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.88 E-value=2.8e-22 Score=190.32 Aligned_cols=248 Identities=11% Similarity=0.024 Sum_probs=163.5
Q ss_pred hHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC--C
Q 018401 32 PEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--L 107 (356)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~ 107 (356)
..++....+.....++.|+|..++++ ++|.|++++.+.+.+.. .+| +...+..++++++.+++.+.+| +
T Consensus 17 ~~~~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~lr~~ia~~~~~~~g~~~ 89 (391)
T 3h14_A 17 MDVMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDA-LGY------TVALGLPALRQRIARLYGEWYGVDL 89 (391)
T ss_dssp HHHHHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC-----------------CCHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCChHHHHHHHHHHHHHHhCCCC
Confidence 44444444433333578899888774 47889999998886521 122 2223456788888888888888 4
Q ss_pred CCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHH
Q 018401 108 DPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKS 187 (356)
Q Consensus 108 ~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~ 187 (356)
+++++++++|+++++..++.+++++||+|++..++|.++.. .+...|.++..++++.+ .++.+|+++|+++
T Consensus 90 ~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~ 160 (391)
T 3h14_A 90 DPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQ--------ILRALGLVPVDLPTAPE-NRLQPVPADFAGL 160 (391)
T ss_dssp CGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHTTCEEEEEECCGG-GTTSCCHHHHTTS
T ss_pred CHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCCEEEEeecCcc-cCCCCCHHHHHhc
Confidence 67788889999999999999999999999999977655432 44456766666643322 2357899998765
Q ss_pred hhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC-CCCCCCCCccEEEeCCCCcCC--C
Q 018401 188 ATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPFEYADVVTTTTHKSLR--G 259 (356)
Q Consensus 188 i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~-~~~~~l~~~D~~~~s~~K~l~--g 259 (356)
++++|+++ ++| +|.+.+ +++|+++|++||+++|+|++|+....... .....+...++++.|.+|+++ |
T Consensus 161 ----~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 236 (391)
T 3h14_A 161 ----DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTG 236 (391)
T ss_dssp ----CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTT
T ss_pred ----CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCcc
Confidence 68888887 777 887776 88899999999999999999974332111 111111235688999999874 2
Q ss_pred CCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018401 260 PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 314 (356)
Q Consensus 260 p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~ 314 (356)
.+.|+++.+++ +.+.+..... ...++++.+..+++.++++
T Consensus 237 ~r~G~~~~~~~--------------~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~ 276 (391)
T 3h14_A 237 WRVGWMVVPED--------------QVRVVERIAQ-NMFICAPHASQVAALAALD 276 (391)
T ss_dssp SCCEEEECCGG--------------GHHHHHHHHH-HTTCCCCHHHHHHHHHHTT
T ss_pred ceeEEEEeCHH--------------HHHHHHHHHh-hhccCCCHHHHHHHHHHhC
Confidence 23388888773 3333322111 1124566666666666665
No 46
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.88 E-value=8.8e-23 Score=195.24 Aligned_cols=229 Identities=10% Similarity=0.071 Sum_probs=164.3
Q ss_pred cccccccChHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHH
Q 018401 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (356)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 101 (356)
++++..+++..+..+.+. ....+.|+|..+.+. +++.+.+++.+.+.+. ..+|+ ...+..++++++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~------~~~g~~~l~~~la~~~ 75 (411)
T 2o0r_A 4 VSRLRPYATTVFAEMSAL-ATRIGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQYP------PGPGSAPLRRAIAAQR 75 (411)
T ss_dssp CGGGGGGSSCHHHHHHHH-HHTTTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCSCC------CTTCCHHHHHHHHHHH
T ss_pred hhHhHhcCccHHHHHHHH-hhcCCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCCCC------CCCCCHHHHHHHHHHH
Confidence 456667777788777764 334467888877664 5789999999988652 11232 2234567888888888
Q ss_pred HHHcCC--CCC-ccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCC
Q 018401 102 LEAFRL--DPE-KWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 178 (356)
Q Consensus 102 a~~~g~--~~~-~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 178 (356)
.+.+|+ +++ ++++++|+++++..++.+++++||+|+++.++|.++.. .+...|.+++.++++.+..++.
T Consensus 76 ~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~--------~~~~~g~~~~~v~~~~~~~~~~ 147 (411)
T 2o0r_A 76 RRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSP--------VVAMAGAHRVTVPLVPDGRGFA 147 (411)
T ss_dssp HHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEEETTEEE
T ss_pred HHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCCEEEEeeccccccCCC
Confidence 888885 566 78789999999998999999999999999988876532 3345566665554322101356
Q ss_pred CCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc----CCCCCC-CCCccE
Q 018401 179 IDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSP-FEYADV 248 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~~-l~~~D~ 248 (356)
+|+++|++++++ ++++|+++ ++| +|.+.+ +++|.++|+++|+++|+|++|+.+.... .+.... ..+.|+
T Consensus 148 ~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i 226 (411)
T 2o0r_A 148 LDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTI 226 (411)
T ss_dssp CCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEE
T ss_pred CCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEE
Confidence 899999999986 78999887 767 887765 5899999999999999999997654321 111111 124799
Q ss_pred EEeCCCCcCCCC--CceEEEEec
Q 018401 249 VTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 249 ~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
+++|+||+++.| +.|++++++
T Consensus 227 ~~~s~sK~~~~~G~r~G~~~~~~ 249 (411)
T 2o0r_A 227 TISSAAKMFNCTGWKIGWACGPA 249 (411)
T ss_dssp EEEEHHHHTTCTTTCEEEEECCH
T ss_pred EEeechhhcCCccceEEEEeeCH
Confidence 999999987533 248888876
No 47
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.88 E-value=8.5e-23 Score=193.43 Aligned_cols=239 Identities=13% Similarity=0.128 Sum_probs=165.6
Q ss_pred cCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC--CCCCccccCCCchHHH
Q 018401 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGGSLSGSPSN 122 (356)
Q Consensus 47 ~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~v~v~~sgs~a~ 122 (356)
+.|+|..+++ ++++.|++++.+.+.+.. .+|+.. ..++++++++++++.+| ++++++++++|+++++
T Consensus 28 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~--------~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~ 98 (391)
T 3dzz_A 28 KELPMWIAEMDFKIAPEIMASMEEKLKVAA-FGYESV--------PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAI 98 (391)
T ss_dssp TCEECCSSCCSSCCCHHHHHHHHHHHTTCC-CCCBCC--------CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHH
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhcCc-CCCCCC--------CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHH
Confidence 5788877665 368999999999886521 122211 36788889999999999 5677888899999999
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 201 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~ 201 (356)
..++.+++++||+|+++.++|.++.. .+...|.+++.++++....++.+|+++|++++++.++++|+++ ++
T Consensus 99 ~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~ 170 (391)
T 3dzz_A 99 SAMVRQFTSPGDQILVQEPVYNMFYS--------VIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPH 170 (391)
T ss_dssp HHHHHHHSCTTCEEEECSSCCHHHHH--------HHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSB
T ss_pred HHHHHHhCCCCCeEEECCCCcHHHHH--------HHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCC
Confidence 99999999999999999977765533 3445566665554321212345899999999984489998887 76
Q ss_pred C-CCCc---ccHHHHHHHHHHcCCEEEEeccchhhhccc----CCCCCCCCCcc--EEEeCCCCcCC--CCCceEEEEec
Q 018401 202 A-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSPFEYAD--VVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 202 n-~g~~---~~l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~~l~~~D--~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
| +|.+ .++++|.++|++||+++|+|++|+...... .+........| +++.|+||+++ |.+.|++++++
T Consensus 171 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~ 250 (391)
T 3dzz_A 171 NPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN 250 (391)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS
T ss_pred CCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC
Confidence 7 8877 678899999999999999999997543221 11111111146 99999999873 33449988873
Q ss_pred CcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 270 GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
+ ++.+.+.........++++.+..+++.++++.
T Consensus 251 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 283 (391)
T 3dzz_A 251 P-------------DLRARAEESFFLAGIGEPNLLAIPAAIAAYEE 283 (391)
T ss_dssp H-------------HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH
T ss_pred H-------------HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc
Confidence 2 44444432211112235666777777777765
No 48
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.88 E-value=6.1e-22 Score=186.03 Aligned_cols=249 Identities=13% Similarity=0.024 Sum_probs=170.0
Q ss_pred cccccccChHHHHHHHHHHHHH---HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHH
Q 018401 24 NAPLEVVDPEIADIIEHEKARQ---WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (356)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~---~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (356)
++.++.+.++.........+.. ++.|+|..++++ +++.|++++.+.+.... +|+.. .. .+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~-------~~----~~lr 73 (363)
T 3ffh_A 7 KKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSKKVAAIQANSSVETE--IYPDG-------WA----SSLR 73 (363)
T ss_dssp CGGGTTCCC----CHHHHHHHTTTCSCCEECSSCSCTTCCCHHHHHHHHTCBSCCC--BC-----------C----HHHH
T ss_pred hHHHHhCCCCCCCCCHHHHHHhcCCCceEEccCCCCCCCCCHHHHHHHHHHHHHhh--cCCCc-------ch----HHHH
Confidence 4445556555544333322221 356899888876 58999999988765421 23211 12 3456
Q ss_pred HHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCC
Q 018401 99 KRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 178 (356)
Q Consensus 99 ~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 178 (356)
+++++++|++++++++++|+++++..++.+++++||+|+++.++|.++. ..+...|.+++.+ +.+ +++.
T Consensus 74 ~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--------~~~~~~g~~~~~v--~~~-~~~~ 142 (363)
T 3ffh_A 74 KEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYR--------QNALIEGAEVREI--PLL-QDGE 142 (363)
T ss_dssp HHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHH--------HHHHHHTCEEEEE--ECC-TTSC
T ss_pred HHHHHHhCCChhhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHH--------HHHHHcCCEEEEe--cCC-CCCC
Confidence 8899999998888888999999999899999999999999996665432 2444567666555 454 3578
Q ss_pred CCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHc--CCEEEEeccchhhhcc---cCCCCCCCCCccEEEe
Q 018401 179 IDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVA---AGVIPSPFEYADVVTT 251 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~--g~~vivD~a~~~g~~~---~~~~~~~l~~~D~~~~ 251 (356)
+|++++++++++ ++++|+++ ++| +|.+.|+++|.++++.+ |+++|+|++|+..... .........+.++++.
T Consensus 143 ~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~ 221 (363)
T 3ffh_A 143 HDLEGMLNAIDE-KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITR 221 (363)
T ss_dssp CCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEE
T ss_pred cCHHHHHHhccc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEe
Confidence 999999999987 89999987 777 89999999999999888 9999999999743321 0000000012457888
Q ss_pred CCCCcCC--CCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018401 252 TTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 314 (356)
Q Consensus 252 s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~ 314 (356)
|++|+++ |.+.|++++++ ++.+.+..... ..+++.+..+++.++++
T Consensus 222 s~sK~~g~~G~r~G~~~~~~--------------~~~~~l~~~~~---~~~~~~~~~~~~~~~l~ 269 (363)
T 3ffh_A 222 TFSKIYGLASARVGYGIADK--------------EIIRQLNIVRP---PFNTTSIGQKLAIEAIK 269 (363)
T ss_dssp ESSSTTCCSSCCCEEEEECH--------------HHHHHHHHTCC---SCCCBHHHHHHHHHHHH
T ss_pred echhhhcCchhceeeeecCH--------------HHHHHHHHhCC---CCCCCHHHHHHHHHHhc
Confidence 9999874 22228888866 55555544322 34677888888888885
No 49
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.88 E-value=3.9e-22 Score=191.73 Aligned_cols=261 Identities=11% Similarity=0.055 Sum_probs=181.0
Q ss_pred cccccccChHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHH
Q 018401 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (356)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 101 (356)
++++...++.++..+.+. ....+.|+|..+.+. +++.+++++.+.+.... .....|+...+..++++++.+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~----~~~~~y~~~~g~~~l~~~la~~l 90 (429)
T 1yiz_A 16 PKRYQGSTKSVWVEYIQL-AAQYKPLNLGQGFPDYHAPKYALNALAAAANSPD----PLANQYTRGFGHPRLVQALSKLY 90 (429)
T ss_dssp SSSCCCCTTCHHHHHHHH-HHHHCCEECCSSSCSSCCCHHHHHHHHHHHTCSC----GGGGSCCCSSCCHHHHHHHHHHH
T ss_pred hHHhhhCCchHHHHHHHH-hccCCEEEecCCCCCCCCCHHHHHHHHHHHhccc----cCccCCCCCCCcHHHHHHHHHHH
Confidence 456677778888877764 334578899877653 57999999998886510 01112232234567888888888
Q ss_pred HHHcCC--CCC-ccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC---
Q 018401 102 LEAFRL--DPE-KWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES--- 175 (356)
Q Consensus 102 a~~~g~--~~~-~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--- 175 (356)
.+.+|. +++ ++++++|+++++..++.+++++||+|+++.+.|.++.. .+...|..++.++ .+.+
T Consensus 91 ~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~~~~~~~ 160 (429)
T 1yiz_A 91 SQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEP--------MVKAAGGIPRFIP--LKPNKTG 160 (429)
T ss_dssp HHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--CBCCCSS
T ss_pred HHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEe--CCccccc
Confidence 888884 677 78889999999998999999999999999977765432 3445566665554 4422
Q ss_pred ------CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc----CCCC
Q 018401 176 ------TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIP 240 (356)
Q Consensus 176 ------~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~ 240 (356)
++.+|+++|++++.+ ++++|+++ ++| +|.+.+ +++|.++|++||+++|+|++|+...... .+..
T Consensus 161 ~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 239 (429)
T 1yiz_A 161 GTISSADWVLDNNELEALFNE-KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICT 239 (429)
T ss_dssp SSEEGGGCBCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGG
T ss_pred ccccccCcccCHHHHHHHhcc-CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhh
Confidence 357899999999976 78998887 767 887774 8899999999999999999997432211 1111
Q ss_pred CC-CCCccEEEeCCCCcCCCCC--ceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 241 SP-FEYADVVTTTTHKSLRGPR--GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 241 ~~-l~~~D~~~~s~~K~l~gp~--gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
.. ..+.|+++.|+||+++.|. .|++++++ ++.+.+..... ....+.+.+..+++.++|+.
T Consensus 240 ~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~-~~~~~~~~~~~~a~~~~l~~ 302 (429)
T 1yiz_A 240 LPGMWERTITIGSAGKTFSLTGWKIGWAYGPE--------------ALLKNLQMVHQ-NCVYTCATPIQEAIAVGFET 302 (429)
T ss_dssp STTTGGGEEEEEEHHHHHTCGGGCCEEEESCH--------------HHHHHHHHHHH-TTTCCCCHHHHHHHHHHHHH
T ss_pred ccCCcCceEEEecchhccCCCCcceEEEEeCH--------------HHHHHHHHHHh-hcccCCChHHHHHHHHHHhc
Confidence 11 1247999999999875232 39998876 44444432211 11235566777777788877
No 50
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.88 E-value=5.9e-22 Score=187.81 Aligned_cols=206 Identities=14% Similarity=0.073 Sum_probs=150.4
Q ss_pred HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHH
Q 018401 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPS 121 (356)
Q Consensus 46 ~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a 121 (356)
++.|+|..+++. +++.+.+++.+.+.... .+| +...+..++++++.+++.+.+|+ +++++++++|++++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a 102 (388)
T 1j32_A 30 IDVCSFSAGEPDFNTPKHIVEAAKAALEQGK-TRY------GPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQS 102 (388)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSC------CCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHH
Confidence 457888877764 57899999998876521 122 32244578888888898888886 56777779999999
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEEc-
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~l~- 199 (356)
+..++.+++++||+|++++++|.++.. .+...|.+++.++ .+. +++.+|+++|++++++ ++++|+++
T Consensus 103 ~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~ 171 (388)
T 1j32_A 103 IFNLMLAMIEPGDEVIIPAPFWVSYPE--------MVKLAEGTPVILP--TTVETQFKVSPEQIRQAITP-KTKLLVFNT 171 (388)
T ss_dssp HHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTCEEEEEC--CCGGGTTCCCHHHHHHHCCT-TEEEEEEES
T ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCCEEEEec--CCcccCCCCCHHHHHHhcCc-CceEEEEeC
Confidence 999999999999999999988766532 3345566665554 432 2467899999999986 78988887
Q ss_pred CCC-CCCcc---cHHHHHHHHHHcCCEEEEeccchhhhcccC----CCCCC--CCCccEEEeCCCCcCCCC--CceEEEE
Q 018401 200 ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSP--FEYADVVTTTTHKSLRGP--RGAMIFF 267 (356)
Q Consensus 200 ~~n-~g~~~---~l~~I~~la~~~g~~vivD~a~~~g~~~~~----~~~~~--l~~~D~~~~s~~K~l~gp--~gG~l~~ 267 (356)
++| +|.+. ++++|.++|+++|+++|+|++|+....... +.... ..+.|+++.|+||+++.| +.|+++.
T Consensus 172 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~ 251 (388)
T 1j32_A 172 PSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAG 251 (388)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEEC
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEe
Confidence 777 88765 488999999999999999999875433111 11110 013789999999988423 2489888
Q ss_pred ec
Q 018401 268 RK 269 (356)
Q Consensus 268 ~~ 269 (356)
++
T Consensus 252 ~~ 253 (388)
T 1j32_A 252 PV 253 (388)
T ss_dssp CH
T ss_pred CH
Confidence 76
No 51
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.88 E-value=4.4e-22 Score=188.80 Aligned_cols=227 Identities=14% Similarity=0.102 Sum_probs=158.1
Q ss_pred cccccccChHHHHHHHHHHHH----HHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHH
Q 018401 24 NAPLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (356)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 97 (356)
++++..+.+..+..+...... .++.|+|..+++. +++.+.+++.+.+.... .+|+ ...+..++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~------~~~g~~~lr~~i 77 (385)
T 1b5p_A 5 SRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGK-TKYA------PPAGIPELREAL 77 (385)
T ss_dssp CHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCC------CTTCCHHHHHHH
T ss_pred hhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCC------CCCCCHHHHHHH
Confidence 344444544444444333222 1357888877763 57899999988876522 1232 223457888888
Q ss_pred HHHHHHHcCC--CCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-
Q 018401 98 QKRALEAFRL--DPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE- 174 (356)
Q Consensus 98 ~~~la~~~g~--~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~- 174 (356)
.+++.+.+|+ +++++++++|+++++..++.++++|||+|+++.++|.++.. .+...|..++.+ +.+.
T Consensus 78 a~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v--~~~~~ 147 (385)
T 1b5p_A 78 AEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPE--------MVRFAGGVVVEV--ETLPE 147 (385)
T ss_dssp HHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEE--ECCGG
T ss_pred HHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEe--ecCcc
Confidence 8888888885 56788889999999999999999999999999977754432 344567666556 4442
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc---CCCCCCCCCc
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA---GVIPSPFEYA 246 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~---~~~~~~l~~~ 246 (356)
+++.+|+++|++++++ ++++|+++ ++| ||.+.+ +++|.++|++||+++|+|++|+...... .+.... .+.
T Consensus 148 ~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~ 225 (385)
T 1b5p_A 148 EGFVPDPERVRRAITP-RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVA-PEH 225 (385)
T ss_dssp GTTCCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTC-TTT
T ss_pred cCCCCCHHHHHHhcCC-CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcC-CCC
Confidence 3457899999999876 78988887 878 897755 8899999999999999999987533211 111110 035
Q ss_pred cEEEeCCCCcCCCC--CceEEEEec
Q 018401 247 DVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 247 D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
++++.|++|+++.| +.|+++.++
T Consensus 226 ~i~~~s~SK~~~~~G~RiG~~~~~~ 250 (385)
T 1b5p_A 226 TLTVNGAAKAFAMTGWRIGYACGPK 250 (385)
T ss_dssp EEEEEESTTTTTCGGGCCEEEECCH
T ss_pred EEEEEechhhcCCcccceEEEEeCH
Confidence 78999999987433 239998876
No 52
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.88 E-value=8.7e-22 Score=190.94 Aligned_cols=195 Identities=9% Similarity=0.021 Sum_probs=147.5
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCc-----cccCCCchHHHHHHHHhhcC
Q 018401 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEK-----WGGSLSGSPSNFQVYTALLK 131 (356)
Q Consensus 57 ~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~-----v~v~~sgs~a~~~~l~al~~ 131 (356)
+.++.+.+++.+++.... .. +.......++++++++++++++|++.++ +++++||++++..++.++..
T Consensus 53 ~~~~~v~e~~~~a~~~~~--~~-----~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~ 125 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKNW--ID-----KEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKW 125 (452)
T ss_dssp CCCHHHHHHHHHTTTCBT--TC-----TTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccCC--CC-----hhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHH
Confidence 567889999988775421 11 1223567788899999999999998765 66799999999888877653
Q ss_pred --------CC-----CeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 018401 132 --------PH-----DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 198 (356)
Q Consensus 132 --------~g-----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l 198 (356)
+| ++|++++ .|.++.. .+...|++++.+ +.+++++.+|+++|++++++ +|++|++
T Consensus 126 ~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~--------~~~~~G~~v~~v--~~~~~~~~~d~~~l~~~i~~-~t~~v~~ 193 (452)
T 2dgk_A 126 RWRKRMEAAGKPTDKPNLVCGP-VQICWHK--------FARYWDVELREI--PMRPGQLFMDPKRMIEACDE-NTIGVVP 193 (452)
T ss_dssp HHHHHHHHTTCCCSCCEEEESS-CCHHHHH--------HHHHTTCEEEEC--CCBTTBCSCCHHHHHHHCCT-TEEEEEC
T ss_pred HHHHHHHhcCCCCCCcEEEECC-CcHHHHH--------HHHHcCceEEEE--ecCCCCCeECHHHHHHHHhh-CCEEEEE
Confidence 55 5899888 7755432 344567666555 55533578999999999987 7888888
Q ss_pred c-CCC-CCCcccHHHHHHHHHHc------CCEEEEeccchhhhccc---CC-CCCCCCCccEEEeCCCCcCCCCCc-eEE
Q 018401 199 G-ASA-YARLYDYERIRKVCNKQ------KAIMLADMAHISGLVAA---GV-IPSPFEYADVVTTTTHKSLRGPRG-AMI 265 (356)
Q Consensus 199 ~-~~n-~g~~~~l~~I~~la~~~------g~~vivD~a~~~g~~~~---~~-~~~~l~~~D~~~~s~~K~l~gp~g-G~l 265 (356)
+ ++| +|.+.|+++|+++|+++ |+++++|+||+.+..+. .. ......++|++++++|||+++|.+ |++
T Consensus 194 ~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~ 273 (452)
T 2dgk_A 194 TFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWV 273 (452)
T ss_dssp BBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEE
T ss_pred EcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEEE
Confidence 8 766 89999999999999996 99999999998765421 11 111233699999999999888888 999
Q ss_pred EEecC
Q 018401 266 FFRKG 270 (356)
Q Consensus 266 ~~~~~ 270 (356)
+++++
T Consensus 274 ~~~~~ 278 (452)
T 2dgk_A 274 IWRDE 278 (452)
T ss_dssp EESSG
T ss_pred EEcCH
Confidence 99764
No 53
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.88 E-value=2.5e-22 Score=192.07 Aligned_cols=249 Identities=14% Similarity=0.142 Sum_probs=162.6
Q ss_pred CCeeecCC-CCCcHHHHHHHHhhhhccCCCCCCCCc-cCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHH
Q 018401 48 GLELIPSE-NFTSVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 48 ~i~L~~~~-~~~~~~V~~a~~~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~ 125 (356)
.+.|+.+. .+.|+.|++++.+.+...+ +++... ++. .......+++++++++++|++++++++++|+++++..+
T Consensus 29 ~~yld~~~~~~~~~~v~~a~~~~l~~~~--~~~~~~~~~~--~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~a 104 (416)
T 1qz9_A 29 VIYLDGNSLGARPVAALARAQAVIAEEW--GNGLIRSWNS--AGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKV 104 (416)
T ss_dssp CEECCTTTSCCCBTTHHHHHHHHHHTCC--CCCGGGHHHH--TSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHH
T ss_pred eEeecCCCcCCCcHHHHHHHHHHHHHHH--hccCccccch--hhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHH
Confidence 45555333 3678899999999887533 222110 110 01123445677999999999888888898999888777
Q ss_pred HHhhc------CCCCe-eeecCCCCCcccCccccccccccccc--ceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEE
Q 018401 126 YTALL------KPHDR-IMALDLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 196 (356)
Q Consensus 126 l~al~------~~gd~-Vl~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v 196 (356)
+.+++ ++||+ |+++..+|+++..++... .... |.+++.++ . +++|++++++ ++++|
T Consensus 105 l~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~----~~~~~~g~~~~~v~--~--------~~~l~~~i~~-~~~~v 169 (416)
T 1qz9_A 105 LSAALRVQATRSPERRVIVTETSNFPTDLYIAEGL----ADMLQQGYTLRLVD--S--------PEELPQAIDQ-DTAVV 169 (416)
T ss_dssp HHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHH----HHHHCSSCEEEEES--S--------GGGHHHHCST-TEEEE
T ss_pred HHhhcccccccCCCCcEEEEcCCCCCchHHHHHHH----HHHhcCCceEEEeC--c--------HHHHHHHhCC-CceEE
Confidence 77765 89997 455556777654332211 1112 55554442 2 6788888876 88999
Q ss_pred EEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCC-CCCc-eEEEEecCcc
Q 018401 197 VAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR-GPRG-AMIFFRKGVK 272 (356)
Q Consensus 197 ~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~-gp~g-G~l~~~~~~~ 272 (356)
+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.|..+.++...+ +|++++|+||+++ |+++ |++++++++.
T Consensus 170 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~---~d~~~~s~~K~l~~g~~~~g~l~~~~~~~ 246 (416)
T 1qz9_A 170 MLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAG---ADYAIGCTYKYLNGGPGSQAFVWVSPQLC 246 (416)
T ss_dssp EEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHT---CSEEEECSSSTTCCCTTCCCEEEECTTTT
T ss_pred EEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcC---CCEEEecCcccCCCCCCCeEEEEECHHHH
Confidence 887 666 8999999999999999999999999999887654432233 8999999999985 6677 9999988642
Q ss_pred hhc---cCCc---chhhhHHHhhccc--cCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 273 EIN---KQGK---EVFYDYEEKINQA--VFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 273 ~~~---~~g~---~~~~~~~~~~~~~--~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
..+ ..|+ ...+++...+... ......|+++...++++.++++.+.+
T Consensus 247 ~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 300 (416)
T 1qz9_A 247 DLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQ 300 (416)
T ss_dssp TTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTT
T ss_pred hccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHh
Confidence 111 1111 0000000000000 00112478999999999999998864
No 54
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.88 E-value=2e-22 Score=191.45 Aligned_cols=233 Identities=18% Similarity=0.183 Sum_probs=162.4
Q ss_pred CCeeecCCC---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 48 GLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 48 ~i~L~~~~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
.|++..+.. ..++.+.+++.+.+.. +..+++..++..+. .+...++++++++++|.+ + .+++++|++++..
T Consensus 45 ~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~---~~~~~~l~~~la~~~~~~-~-~i~~~sGt~a~~~ 118 (399)
T 3tqx_A 45 VLNFCANNYLGLADHPALIKTAQTVVEQ-YGFGMASVRFICGT---QTIHKELEKDISEFLGTD-D-TILYSSCFDANGG 118 (399)
T ss_dssp EEECSSCCTTSCTTCHHHHHHHHHHHHH-HCSCCCSCCCCCCC---BHHHHHHHHHHHHHHTCS-E-EEEESCHHHHHHT
T ss_pred EEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCccccC---chHHHHHHHHHHHHHCCC-c-EEEECchHHHHHH
Confidence 567776643 2379999999988875 32233333332221 233445668999999986 3 3455567888888
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG 199 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~-----~~k~v~l~ 199 (356)
++.+++++||.|++..++|+++.. .+...|.++..+ +. .|+++|++++++. ++++|+++
T Consensus 119 ~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~--~~------~d~~~l~~~l~~~~~~~~~~~~v~~~ 182 (399)
T 3tqx_A 119 LFETLLGPEDAIISDELNHASIID--------GIRLCKAQRYRY--KN------NAMGDLEAKLKEADEKGARFKLIATD 182 (399)
T ss_dssp THHHHCCTTCEEEEETTCCHHHHH--------HHHSCCSEEEEE--CT------TCTTHHHHHHHHHHTTTCSSEEEEEE
T ss_pred HHHHhcCCCCEEEECCcccHHHHH--------HHHHcCCceeEe--CC------CCHHHHHHHHHhhhccCCCceEEEEe
Confidence 889999999999999988876543 344566555444 32 3677888888653 68899887
Q ss_pred -CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCC----CCCC-CCccEEEeCCCCcCCCCCceEEEEecCcc
Q 018401 200 -ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVK 272 (356)
Q Consensus 200 -~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~----~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~ 272 (356)
++| +|.+.|+++|.++|++||+++|+|++|+.|....... ..++ .+.|+++.|+||+++|++||+++.++
T Consensus 183 ~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~~--- 259 (399)
T 3tqx_A 183 GVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSGHK--- 259 (399)
T ss_dssp SEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEECH---
T ss_pred CCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEcCH---
Confidence 556 8999999999999999999999999998765432210 0111 13799999999999888899999887
Q ss_pred hhccCCcchhhhHHHhhccccCCC-CCCCCcHHHHHHHHHHHHHH
Q 018401 273 EINKQGKEVFYDYEEKINQAVFPG-LQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~al~~Al~~~ 316 (356)
++.+.+.....+. ..++++...++++.++++.+
T Consensus 260 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 293 (399)
T 3tqx_A 260 -----------EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELL 293 (399)
T ss_dssp -----------HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHH
Confidence 3444433221111 13577888888888888877
No 55
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.88 E-value=9e-22 Score=184.12 Aligned_cols=228 Identities=9% Similarity=0.011 Sum_probs=165.3
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.|+|..++++ +++.|++++.+.+.... +|+ .. ...++++++++++|++++++++++|+++++..
T Consensus 17 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~-------~~----~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~ 83 (354)
T 3ly1_A 17 NPIRINFNENPLGMSPKAQAAARDAVVKAN--RYA-------KN----EILMLGNKLAAHHQVEAPSILLTAGSSEGIRA 83 (354)
T ss_dssp SCEECSSCCCSSCCCHHHHHHHHHTGGGTT--SCC-------HH----HHHHHHHHHHHHTTSCGGGEEEESHHHHHHHH
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHhhCc--CCC-------CC----chHHHHHHHHHHhCCChHHEEEeCChHHHHHH
Confidence 56889888875 58999999998876522 232 11 22456799999999988888889999999998
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh-cCCcEEEEc-CCC
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAG-ASA 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~-~~~k~v~l~-~~n 202 (356)
++.+++++||+|+++.++|.++.. .+...|.+++.+ +.+ +++.+|+++|++++++ .++++|+++ ++|
T Consensus 84 ~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~--~~~-~~~~~d~~~l~~~l~~~~~~~~v~l~~p~n 152 (354)
T 3ly1_A 84 AIEAYASLEAQLVIPELTYGDGEH--------FAKIAGMKVTKV--KML-DNWAFDIEGLKAAVAAYSGPSIVYLVNPNN 152 (354)
T ss_dssp HHHHHCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEE--CCC-TTSCCCHHHHHHHHHTCSSCEEEEEESSCT
T ss_pred HHHHHhCCCCeEEECCCCchHHHH--------HHHHcCCEEEEe--cCC-CCCCCCHHHHHHHhccCCCCCEEEEeCCCC
Confidence 999999999999999977765532 344567666555 555 3578999999999983 389999987 777
Q ss_pred -CCCcccHHHHHHHHHH--cCCEEEEeccchhhhcccCC-CC---CCCC-CccEEEeCCCCcCC--CCCceEEEEecCcc
Q 018401 203 -YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGV-IP---SPFE-YADVVTTTTHKSLR--GPRGAMIFFRKGVK 272 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~--~g~~vivD~a~~~g~~~~~~-~~---~~l~-~~D~~~~s~~K~l~--gp~gG~l~~~~~~~ 272 (356)
+|.+.|.++|.++++. +|+++|+|++|+........ .. .+-. +.++++.|+||+++ |.+.|+++.++
T Consensus 153 ptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--- 229 (354)
T 3ly1_A 153 PTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHP--- 229 (354)
T ss_dssp TTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCH---
T ss_pred CcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCH---
Confidence 8999998888888887 99999999999744322110 00 0001 25699999999884 22338888866
Q ss_pred hhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 273 EINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
++.+.+...... ++++.+..+++.++++.
T Consensus 230 -----------~~~~~~~~~~~~---~~~~~~~~~a~~~~l~~ 258 (354)
T 3ly1_A 230 -----------TVIALMGRYVAG---EKINFSGVDAALASMND 258 (354)
T ss_dssp -----------HHHHHHGGGTTC---SCCCHHHHHHHHHHTTC
T ss_pred -----------HHHHHHHHhcCC---CCCCHHHHHHHHHHhcC
Confidence 566665544322 57777888777777753
No 56
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.88 E-value=3.5e-22 Score=190.94 Aligned_cols=255 Identities=13% Similarity=0.113 Sum_probs=170.0
Q ss_pred cccChHHHHHHHHHHHHHH-----------------cCCeeecCC---CCCcHHHHHHHHhhhhccCCCCCCCCccCCCc
Q 018401 28 EVVDPEIADIIEHEKARQW-----------------KGLELIPSE---NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGN 87 (356)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~-----------------~~i~L~~~~---~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~ 87 (356)
+.++++++.++.+...... ..+++..+. .+.+|.+++++.+.+.. +..++.......+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~-~~~~~~~~~~~~g~ 102 (409)
T 3kki_A 24 PQLPDFIQNKIDHYIENYFDINKNGKHLVLGKQASPDDIILQSNDYLALANHPLIKARLAKSLLE-EQQSLFMSASFLQN 102 (409)
T ss_dssp CCCCHHHHHHHHHHHHHHTTTSTTSSCTTCCCCCCTTSEECCCSCTTCCTTCHHHHHHHHHHHHS-CCCCCCSBGGGGCS
T ss_pred ccchHHHHHHHHHHHHHHhhhccCCCeeeeCCCCCCceEEeeccCccCCcCCHHHHHHHHHHHHH-cCCCCCccccccCC
Confidence 5678888888876544321 123444332 12479999999998876 32222222221111
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEE
Q 018401 88 EYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 167 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 167 (356)
.++.+++++++++++|.+.. +++++|++++..++.+++++||.|+++.+.|.++.. .+...|..+..
T Consensus 103 ---~~~~~~l~~~la~~~g~~~~--i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~ 169 (409)
T 3kki_A 103 ---DYDKPMIEKRLAKFTGFDEC--LLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWE--------GARYANAQAHP 169 (409)
T ss_dssp ---TTTSCHHHHHHHHHHTCSEE--EEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHH--------HHHHTTCEEEE
T ss_pred ---cHHHHHHHHHHHHHhCCCeE--EEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHH--------HHHHcCCeEEE
Confidence 12233456889999998753 456777899998999999999999999988766543 34455655533
Q ss_pred EecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCC----CC
Q 018401 168 MPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PS 241 (356)
Q Consensus 168 v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~----~~ 241 (356)
+ +. .|+++|++++.+.++++|+++ ++| +|.+.|+++|.++|++||+++|+|++|+.|.....-. ..
T Consensus 170 ~--~~------~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~ 241 (409)
T 3kki_A 170 F--MH------NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAEL 241 (409)
T ss_dssp E--CT------TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHH
T ss_pred e--cC------CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhc
Confidence 3 22 589999999986568999998 555 8999999999999999999999999998765421100 01
Q ss_pred CC-CCccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCC-CCCCcHHHHHHHHHHHHHHhcc
Q 018401 242 PF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGL-QGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 242 ~l-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~al~~Al~~~~~~ 319 (356)
++ ..+|+++.|++|+++++ ||+++.++++ .+.+.....+.. .++.+...++++.++++.+.+.
T Consensus 242 ~~~~~~di~~~s~sK~~~~~-gg~v~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~ 306 (409)
T 3kki_A 242 GLTREVHFMTASLAKTFAYR-AGAIWCNNEV--------------NRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESA 306 (409)
T ss_dssp TCGGGCSEEEEESSSTTCSS-CEEEEESSSG--------------GGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCEEEeecchhhCCC-ceEEEECHHH--------------HHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcC
Confidence 11 13789999999998665 7888888743 111111100111 1346677788888889887653
No 57
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.88 E-value=6e-22 Score=190.64 Aligned_cols=234 Identities=15% Similarity=0.131 Sum_probs=162.6
Q ss_pred CCeeecCCC---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 48 GLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 48 ~i~L~~~~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
.|+|..+.. ..++.+++++.+.+.. +..++++.+...|. .....++++.+++++|++ +.+++++|++++..
T Consensus 66 ~id~~~~~~lg~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~G~---~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~ 139 (427)
T 2w8t_A 66 TILLGTYNYMGMTFDPDVIAAGKEALEK-FGSGTCGSRMLNGT---FHDHMEVEQALRDFYGTT--GAIVFSTGYMANLG 139 (427)
T ss_dssp EEECSCCCTTCGGGCHHHHHHHHHHHHH-HCSCCCSCTTTTCC---CHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHH
T ss_pred EEEEECcccccCCCCHHHHHHHHHHHHH-hCCCCcccccccCC---cHHHHHHHHHHHHHhCCC--ceEEecCcHHHHHH
Confidence 467777753 2579999999998865 22233333222221 234455668899999875 34567788889998
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc---CCcEEEEc-C
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLIVAG-A 200 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~---~~k~v~l~-~ 200 (356)
++.+++++||.|++..+.|.++.. .+...|.+++.+ + ..|+++|++++.+. ++++|+++ +
T Consensus 140 al~~l~~~gd~vl~~~~~h~~~~~--------~~~~~g~~~~~~--~------~~d~~~le~~l~~~~~~~~~~v~~~~~ 203 (427)
T 2w8t_A 140 IISTLAGKGEYVILDADSHASIYD--------GCQQGNAEIVRF--R------HNSVEDLDKRLGRLPKEPAKLVVLEGV 203 (427)
T ss_dssp HHHHHSCTTCEEEEETTCCHHHHH--------HHHHSCSEEEEE--C------TTCHHHHHHHHHTSCSSSCEEEEEESE
T ss_pred HHHHhcCCCCEEEECCcccHHHHH--------HHHHcCCeeEEe--C------CCCHHHHHHHHHhccCCCCeEEEEcCC
Confidence 889999999999999988876643 344556555444 3 25899999998753 67888887 4
Q ss_pred CC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCC----CCC-CCccEEEeCCCCcCCCCCceEEEEecCcchh
Q 018401 201 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP----SPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 274 (356)
Q Consensus 201 ~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~----~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~ 274 (356)
.| +|.+.|+++|.++|++||+++|+|++|+.|........ .++ .++|++++|+||+++ ++||+++.++++
T Consensus 204 ~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g-~~gG~v~~~~~l--- 279 (427)
T 2w8t_A 204 YSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVG-TVGGFVVSNHPK--- 279 (427)
T ss_dssp ETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC-SCCEEEEECCTT---
T ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhc-cCCCEEEeCHHH---
Confidence 45 89999999999999999999999999988766410000 111 147999999999885 778999988742
Q ss_pred ccCCcchhhhHHHhhccccCCC-CCCCCcHHHHHHHHHHHHHHhc
Q 018401 275 NKQGKEVFYDYEEKINQAVFPG-LQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~al~~Al~~~~~ 318 (356)
.+.+.....+. ..++.+...++++.++++.+.+
T Consensus 280 -----------~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~ 313 (427)
T 2w8t_A 280 -----------FEAVRLACRPYIFTASLPPSVVATATTSIRKLMT 313 (427)
T ss_dssp -----------GGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTS
T ss_pred -----------HHHHHHhcccccccCCCCHHHHHHHHHHHHHHhc
Confidence 22222210011 1256777888888899988754
No 58
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.88 E-value=2.8e-22 Score=188.42 Aligned_cols=228 Identities=10% Similarity=-0.017 Sum_probs=164.0
Q ss_pred HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHH
Q 018401 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 46 ~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~ 123 (356)
++.|+|..++++ +++.|++++.+.+.... +|+.. .. . ++++.+++++|++++++++++|+++++.
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~------~~-~----~lr~~la~~~~~~~~~v~~~~g~~~a~~ 96 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANKAH--LYPDD------SM-I----ELKSTLAQKYKVQNENIIIGAGSDQVIE 96 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGGTT--SCCCT------TC-H----HHHHHHHHHHTCCGGGEEEESSHHHHHH
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhhc--cCCCC------Ch-H----HHHHHHHHHhCCCcceEEECCCHHHHHH
Confidence 467899988876 58999999999886422 44433 11 2 3558888999998888888999999999
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
.++.+++++||+|+++.++|.++.. .+...|.+++.+ +.+.+++ +|++++++++++ ++++|+++ ++|
T Consensus 97 ~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v--~~~~~~~-~d~~~l~~~l~~-~~~~v~~~~p~n 164 (365)
T 3get_A 97 FAIHSKLNSKNAFLQAGVTFAMYEI--------YAKQCGAKCYKT--QSITHNL-DEFKKLYETHKD-EIKLIFLCLPNN 164 (365)
T ss_dssp HHHHHHCCTTCEEEECSSCCTHHHH--------HHHHHTCEEEEC--SSSSCCH-HHHHHHHHHTTT-TEEEEEEESSCT
T ss_pred HHHHHHhCCCCEEEEeCCChHHHHH--------HHHHcCCEEEEE--ecCCCCC-CCHHHHHHHhCC-CCCEEEEcCCCC
Confidence 8999999999999999977765432 344567666555 4422557 999999999986 89999987 777
Q ss_pred -CCCcccHHHHHHHHH--HcCCEEEEeccchhhhc--c----cCCCCC-CCCCccEEEeCCCCcCC--CCCceEEEEecC
Q 018401 203 -YARLYDYERIRKVCN--KQKAIMLADMAHISGLV--A----AGVIPS-PFEYADVVTTTTHKSLR--GPRGAMIFFRKG 270 (356)
Q Consensus 203 -~g~~~~l~~I~~la~--~~g~~vivD~a~~~g~~--~----~~~~~~-~l~~~D~~~~s~~K~l~--gp~gG~l~~~~~ 270 (356)
+|.+.|+++|.++++ ++|+++|+|++|+.+.. . ...... ...+.++++.|+||+++ |.+.|++++++
T Consensus 165 ptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~- 243 (365)
T 3get_A 165 PLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANA- 243 (365)
T ss_dssp TTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECH-
T ss_pred CCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCH-
Confidence 899999998888888 67999999999985442 1 111000 00126789999999874 33348888866
Q ss_pred cchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 271 VKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 271 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
++.+.+.....+ .+++.+..+++.++++.
T Consensus 244 -------------~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~ 272 (365)
T 3get_A 244 -------------NIISAFYKLRAP---FNVSNLALKAAVAAMDD 272 (365)
T ss_dssp -------------HHHHHHHHHSCT---TCSCHHHHHHHHHHHTC
T ss_pred -------------HHHHHHHHhcCC---CCcCHHHHHHHHHHhCC
Confidence 455555433221 34777777777777763
No 59
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.88 E-value=1.7e-21 Score=191.90 Aligned_cols=206 Identities=12% Similarity=0.028 Sum_probs=154.1
Q ss_pred chhHHHHHHHHHHHHHHHcCCCC--Ccc--ccCCCchHHHHHHHHhhcCCC--------CeeeecCCCCCcccCcccccc
Q 018401 87 NEYIDMAESLCQKRALEAFRLDP--EKW--GGSLSGSPSNFQVYTALLKPH--------DRIMALDLPHGGHLSHGYQTD 154 (356)
Q Consensus 87 ~~~~~~l~~~~~~~la~~~g~~~--~~v--~v~~sgs~a~~~~l~al~~~g--------d~Vl~~~~~~~~~~~~~~~~~ 154 (356)
......+++++++++++++|+++ +++ ++++||++++..++.++.++| |+|+++.+.|.++..
T Consensus 134 ~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~------ 207 (514)
T 3mad_A 134 WPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDK------ 207 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHH------
T ss_pred ChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHH------
Confidence 35567888889999999999974 566 779999999999999987776 999999988876533
Q ss_pred cccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhh
Q 018401 155 TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISG 232 (356)
Q Consensus 155 ~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g 232 (356)
.+...|.+++.+ +.+ +++.+|+++|++++++ ++++|+++ ++| +|.+.|+++|.++|++||+++|+|++|+.+
T Consensus 208 --~~~~~G~~v~~v--~~~-~~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~ 281 (514)
T 3mad_A 208 --AAQYFGIKLVRT--PLD-ADYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGF 281 (514)
T ss_dssp --HHHHHTCEEEEE--CBC-TTSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred --HHHHcCCeeEEe--eeC-CCCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccc
Confidence 444567777666 455 4678999999999987 88999888 666 899999999999999999999999999765
Q ss_pred hcc----cCC----CCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhcc----------cc
Q 018401 233 LVA----AGV----IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQ----------AV 293 (356)
Q Consensus 233 ~~~----~~~----~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~----------~~ 293 (356)
..+ .+. ......++|++++++||++++|.| |+++++++. ...... ..
T Consensus 282 ~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~--------------~~~~~~~~~~~~~~~~~~ 347 (514)
T 3mad_A 282 ILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPD--------------LLHYQYFIAADWPGGLYF 347 (514)
T ss_dssp THHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHH--------------HHTTTCEEESSCTTCSEE
T ss_pred cchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHH--------------HhccccccccccCCCccc
Confidence 432 010 111122589999999999888877 999888741 111000 00
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 294 FPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 294 ~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
.+...|+.+...++++.++++.+..
T Consensus 348 ~~~~~gs~~~~~~~a~~aal~~l~~ 372 (514)
T 3mad_A 348 SPTFAGSRPGALSATAWAAMLSLGE 372 (514)
T ss_dssp ESSSCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCchHHHHHHHHHHHHHhH
Confidence 1122467787778888888877754
No 60
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.88 E-value=7.4e-22 Score=186.03 Aligned_cols=229 Identities=11% Similarity=-0.002 Sum_probs=162.4
Q ss_pred HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHH
Q 018401 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPS 121 (356)
Q Consensus 46 ~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a 121 (356)
++.|+|..+++. +++.+.+++.+.+.... .+| +...+..++++++.+++.+.+|. +++++++++|++++
T Consensus 29 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a 101 (370)
T 2z61_A 29 KKVIHLEIGEPDFNTPKPIVDEGIKSLKEGK-THY------TDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLG 101 (370)
T ss_dssp CCCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CSC------CCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHH
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHHcCc-cCC------CCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHH
Confidence 357888877764 47899999998886521 122 22234567888888888887774 66777779999999
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
+..++.+++++||+|++++++|.++.. .+...|..+..+ + +|+++|++++++ ++++|+++ +
T Consensus 102 ~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v--~-------~d~~~l~~~l~~-~~~~v~~~~p 163 (370)
T 2z61_A 102 LFFALSSIIDDGDEVLIQNPCYPCYKN--------FIRFLGAKPVFC--D-------FTVESLEEALSD-KTKAIIINSP 163 (370)
T ss_dssp HHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTCEEEEE--C-------SSHHHHHHHCCS-SEEEEEEESS
T ss_pred HHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEe--C-------CCHHHHHHhccc-CceEEEEcCC
Confidence 999999999999999999988766543 334456555444 2 689999999986 78888887 7
Q ss_pred CC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcc---cCCCCC-CCCCccEEEeCCCCcCCCCC--ceEEEEecCcch
Q 018401 201 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA---AGVIPS-PFEYADVVTTTTHKSLRGPR--GAMIFFRKGVKE 273 (356)
Q Consensus 201 ~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~---~~~~~~-~l~~~D~~~~s~~K~l~gp~--gG~l~~~~~~~~ 273 (356)
+| +|.+.|++ |.++|++||+++|+|++|+.+... ..+... ...+.|+++.|+||+++.|. .|++++++
T Consensus 164 ~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~---- 238 (370)
T 2z61_A 164 SNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND---- 238 (370)
T ss_dssp CTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH----
T ss_pred CCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH----
Confidence 77 89999999 999999999999999999865432 111111 11247999999999884232 38988877
Q ss_pred hccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 274 INKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 274 ~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
++.+.+..... ...++++.+..+++.++++.
T Consensus 239 ----------~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~ 269 (370)
T 2z61_A 239 ----------EIIEAILKLQQ-NLFISAPTISQYAALKAFEK 269 (370)
T ss_dssp ----------HHHHHHHHHHH-HHTSSSCHHHHHHHGGGGSH
T ss_pred ----------HHHHHHHHHHh-hcccCCCHHHHHHHHHHHhc
Confidence 34443322111 11235666777766666654
No 61
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.87 E-value=7.4e-22 Score=187.07 Aligned_cols=225 Identities=8% Similarity=0.031 Sum_probs=150.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccce--eeE
Q 018401 89 YIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI--FFE 166 (356)
Q Consensus 89 ~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~ 166 (356)
...++.+++++.+++++|++ +.+++++|||+++.+++. .+.+||+|++++..|.+.. +.. .....|. .+.
T Consensus 32 ~~~~~~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~--~~~----~~~~~g~~~~~~ 103 (379)
T 3ke3_A 32 AFQEVMNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYR--WTQ----ILEKGKFAKSST 103 (379)
T ss_dssp HHHHHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHH--HHH----HHHHHCCSSEEE
T ss_pred HHHHHHHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHH--HHH----HHHHhCCCCceE
Confidence 34567778999999999998 456669999999887664 4679999999886664431 110 1112232 344
Q ss_pred EEecccCC-----CC-CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcc
Q 018401 167 TMPYRLNE-----ST-GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA 235 (356)
Q Consensus 167 ~v~~~~~~-----~~-~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~ 235 (356)
.++.+... .. ..+|++++++++.+.++++|+++ .+| +|.+.| +++|.++|++||+++|+|++|+ |..+
T Consensus 104 ~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~ 182 (379)
T 3ke3_A 104 VLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVW 182 (379)
T ss_dssp EEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCC
T ss_pred EEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcc
Confidence 44332210 01 25899999999964489998887 444 888888 9999999999999999999998 8666
Q ss_pred cCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccC-Ccchh-hhHH---HhhccccCCC--CCCCCcHHHHH
Q 018401 236 AGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ-GKEVF-YDYE---EKINQAVFPG--LQGGPHNHTIT 307 (356)
Q Consensus 236 ~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~-g~~~~-~~~~---~~~~~~~~~~--~~gt~~~~~~~ 307 (356)
.++..++ +|++++|+||+|+||.| |++++++++...... ....+ +++. +......... ..+|++++.++
T Consensus 183 ~~~~~~~---~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~ 259 (379)
T 3ke3_A 183 LDMKELG---IDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLR 259 (379)
T ss_dssp CCHHHHT---CSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHH
T ss_pred ccccccC---CCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHH
Confidence 5544444 99999999999999988 999998754211111 11100 1111 1000000011 12699999999
Q ss_pred HHHHHHHHHhcccccchhh
Q 018401 308 GLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 308 al~~Al~~~~~~~~~~~~~ 326 (356)
|+.+|++++.++ ++++++
T Consensus 260 a~~aal~~~~~~-g~~~~~ 277 (379)
T 3ke3_A 260 QFRDAILEAKEI-GFDILR 277 (379)
T ss_dssp HHHHHHHHHHHH-CHHHHH
T ss_pred HHHHHHHHHHHh-cHHHHH
Confidence 999999998764 344333
No 62
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.87 E-value=5.1e-22 Score=188.07 Aligned_cols=252 Identities=12% Similarity=0.114 Sum_probs=173.2
Q ss_pred cChHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC-
Q 018401 30 VDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR- 106 (356)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g- 106 (356)
-+..+|+...+.. ...+.|+|..+++. +||.|++++.+.+.+.. .+|+. ...++++++++++++++|
T Consensus 17 ~g~~~~d~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~--------~~~~~~~~l~~~l~~~~g~ 86 (391)
T 4dq6_A 17 NFSSKWSEMEKKY-GTNDLLPMWVADMDFKAAPCIIDSLKNRLEQEI-YGYTT--------RPDSYNESIVNWLYRRHNW 86 (391)
T ss_dssp TTBHHHHCHHHHH-SCSCSEECCSSSCSSCCCHHHHHHHHHHHTTCC-CCCBC--------CCHHHHHHHHHHHHHHHCC
T ss_pred CCceeeeeccccc-CCCCceeccccCCCCCCCHHHHHHHHHHHhCCC-CCCCC--------CCHHHHHHHHHHHHHHhCC
Confidence 4556666544321 12466888877763 57999999999886521 12221 236788889999999999
Q ss_pred -CCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecc-cCCCCCCCCHHHH
Q 018401 107 -LDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR-LNESTGYIDYDQL 184 (356)
Q Consensus 107 -~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~~d~~~l 184 (356)
++++++++++|+++++..++.+++++||+|+++.++|.++.. .+...|.+++.++++ ....++.+|+++|
T Consensus 87 ~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~d~~~l 158 (391)
T 4dq6_A 87 KIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNS--------VVKNNNRELIISPLQKLENGNYIMDYEDI 158 (391)
T ss_dssp CCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHH--------HHHHTTCEEEECCCEECTTSCEECCHHHH
T ss_pred CCcHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHH--------HHHHcCCeEEeeeeeecCCCceEeeHHHH
Confidence 677888889999999998999999999999999977765533 344567666555433 1223346899999
Q ss_pred HHHhhhcCCcEEEEc-CCC-CCCc---ccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC-------CccEEEeC
Q 018401 185 EKSATLFRPKLIVAG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-------YADVVTTT 252 (356)
Q Consensus 185 ~~~i~~~~~k~v~l~-~~n-~g~~---~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~-------~~D~~~~s 252 (356)
++++++ +++|+++ ++| +|.+ .++++|.++|++||+++|+|++|+....... ...++. +..+++.|
T Consensus 159 ~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~~~i~~~s 235 (391)
T 4dq6_A 159 ENKIKD--VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKH-KHIPMASISKEFEKNTITCMA 235 (391)
T ss_dssp HHHCTT--EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC-CCCCGGGSCHHHHHTEEEEEC
T ss_pred HHHhhc--CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCC-CccCHHHcCccccCcEEEEEe
Confidence 999976 8888887 777 8876 5688999999999999999999975332211 111111 12388999
Q ss_pred CCCcCC--CCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 253 THKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 253 ~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
+||+++ |.+.|+++++++ ++.+.+.........++++.+..+++.++++.
T Consensus 236 ~sK~~g~~G~r~G~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (391)
T 4dq6_A 236 PTKTFNIAGLQSSYVVLPDE-------------KDYKLLDDAFTRIDIKRNNCFSLVATEASYNN 287 (391)
T ss_dssp SHHHHTCGGGCCEEEECCSH-------------HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred chhhccCcccceEEEEeCCH-------------HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc
Confidence 999874 333388887762 34443332211223457788888888888875
No 63
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.87 E-value=5.5e-22 Score=194.52 Aligned_cols=232 Identities=16% Similarity=0.118 Sum_probs=166.8
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC--CCccccCCCchHHHHHHHHhhcC-----
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGGSLSGSPSNFQVYTALLK----- 131 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~--~~~v~v~~sgs~a~~~~l~al~~----- 131 (356)
++.+.+++.+.+.. +...++ .++....+..++++++++++++++|++ ++++++++||++++..++.++.+
T Consensus 77 ~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~ 153 (497)
T 3mc6_A 77 GDDLIHLQTIAYEK-YCVANQ--LHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHH 153 (497)
T ss_dssp CHHHHHHHHHHHHH-TSSCBT--TCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH-HhhcCC--CCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhc
Confidence 57788888777664 211111 123344567788899999999999997 56777799999999988888754
Q ss_pred CC---CeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCc
Q 018401 132 PH---DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARL 206 (356)
Q Consensus 132 ~g---d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~ 206 (356)
+| |+|+++.+.|.++.. .+...|.+++.+ +.+.+++.+|+++|++++++ ++++|+++ ++| +|.+
T Consensus 154 ~g~~~~~Vi~~~~~h~~~~~--------~~~~~G~~~~~v--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~ 222 (497)
T 3mc6_A 154 RGITEPEIIAPVTAHAGFDK--------AAYYFGMKLRHV--ELDPTTYQVDLGKVKKFINK-NTVLLVGSAPNFPHGIA 222 (497)
T ss_dssp SCCSSCEEEEETTSCHHHHH--------HHHHSCCEEEEE--CBCTTTCSBCTTTTGGGCCS-SEEEEEEETTCTTTCCC
T ss_pred CCCCCceEEEeCCccHHHHH--------HHHHcCCeEEEE--ecCcccCcCCHHHHHHHHhh-CCEEEEEECCCCCCCcC
Confidence 56 899999987766543 444567777666 45533678999999999987 78999888 666 8999
Q ss_pred ccHHHHHHHHHHcCCEEEEeccchhhhccc----C---C--CCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhcc
Q 018401 207 YDYERIRKVCNKQKAIMLADMAHISGLVAA----G---V--IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 276 (356)
Q Consensus 207 ~~l~~I~~la~~~g~~vivD~a~~~g~~~~----~---~--~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 276 (356)
.|+++|+++|++||+++|+|++|+.+..+. + + ......++|++++++||++++|.| |+++++++.
T Consensus 223 ~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~----- 297 (497)
T 3mc6_A 223 DDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSD----- 297 (497)
T ss_dssp CSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHH-----
T ss_pred CCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHH-----
Confidence 999999999999999999999998665431 1 1 111122599999999999888888 999887731
Q ss_pred CCcchhhhHHHhhcc----c------cCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 277 QGKEVFYDYEEKINQ----A------VFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 277 ~g~~~~~~~~~~~~~----~------~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
...... . ..+...|+.+...++++.++++.+..
T Consensus 298 ---------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~ 340 (497)
T 3mc6_A 298 ---------LRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGE 340 (497)
T ss_dssp ---------HHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHH
T ss_pred ---------HHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhH
Confidence 111100 0 01112356666778888888887754
No 64
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.87 E-value=2.3e-22 Score=188.92 Aligned_cols=244 Identities=10% Similarity=0.045 Sum_probs=160.7
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCC--CCccCCCchhHHHHHHHHHHHHHHHcCCCCC-ccc-cCCCchHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYP--GARYYGGNEYIDMAESLCQKRALEAFRLDPE-KWG-GSLSGSPSNF 123 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~-~v~-v~~sgs~a~~ 123 (356)
.+++.+++.++|+.|++++.+.+.+....+.. ...++ .....++.+++++++++++|++++ +++ +++|+++++.
T Consensus 5 ~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~ 82 (362)
T 2c0r_A 5 AYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHR--GAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFA 82 (362)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTT--SHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHH
T ss_pred eeeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCC--cHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHH
Confidence 46788888899999999999988652211111 01111 133456677899999999999764 654 4889999999
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCC-CCCCHHHHHHHhhhcCCcEEEEc-CC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST-GYIDYDQLEKSATLFRPKLIVAG-AS 201 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-~~~d~~~l~~~i~~~~~k~v~l~-~~ 201 (356)
.++.++++|||+|+++++.+.++ .+. ..+...| +++.++++.+.+. ..+|.++++ +++ +||+|+++ ++
T Consensus 83 ~~~~~l~~~gd~vl~~~~~~~~~--~~~----~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~-~t~~v~~~~~~ 152 (362)
T 2c0r_A 83 MIPMNFLKEGQTANYVMTGSWAS--KAL----KEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQD-NAAYLHLTSNE 152 (362)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHH--HHH----HHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCT-TEEEEEEESEE
T ss_pred HHHHhcCCCCCeEEEEecCcHhH--HHH----HHHHHhC-CeEEEecccccccccCCCHHHcc--cCC-CcCEEEEeCCc
Confidence 99999999999998876433221 010 1233456 6766754321112 235666654 555 78998887 66
Q ss_pred C-CCCc-ccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCC
Q 018401 202 A-YARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQG 278 (356)
Q Consensus 202 n-~g~~-~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g 278 (356)
| +|.. .|+++| +|+++++|++|+.|..+.++. ..|++++|+||++ ||.| |++++++++...+...
T Consensus 153 n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~-----~~d~~~~s~~K~~-g~~G~G~l~~~~~~~~~l~~~ 220 (362)
T 2c0r_A 153 TIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDLN-----QFGLVYAGAQKNL-GPSGVTVVIVREDLVAESPKH 220 (362)
T ss_dssp TTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCGG-----GCSEEEEETTTTT-CCSSCEEEEEEGGGSSSCCTT
T ss_pred Cccceeccccccc------CCCEEEEEChhhccCCccchh-----HCcEEEEeccccc-cCcCcEEEEEcHHHHhhcccc
Confidence 6 8874 677776 899999999999887664432 2589999999988 6888 9999988642111110
Q ss_pred cchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 279 KEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
.+..+++..... .....+|++.+.++++.+|++.+.+
T Consensus 221 ~~~~~~~~~~~~---~~~~~~t~~~~~~~a~~~al~~~~~ 257 (362)
T 2c0r_A 221 LPTMLRYDTYVK---NNSLYNTPPSFGIYMVNEVLKWIEE 257 (362)
T ss_dssp SCGGGCHHHHHH---TTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CchHHhHHHHhh---ccCcCCCchHHHHHHHHHHHHHHHH
Confidence 011011111100 1122479999999999999998765
No 65
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.87 E-value=1.5e-21 Score=191.74 Aligned_cols=197 Identities=10% Similarity=0.027 Sum_probs=149.5
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC--CCcccc---CCCchHHHHHHHHhhc
Q 018401 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGG---SLSGSPSNFQVYTALL 130 (356)
Q Consensus 56 ~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~--~~~v~v---~~sgs~a~~~~l~al~ 130 (356)
.++++.+.+++.+.+...+ .++ .......++++++++++++++|++ ++++.+ ++||++++..++.++.
T Consensus 66 ~~~~~~v~~~l~~~~~~~~--~~~-----~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~ 138 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNY--VDM-----DEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFK 138 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBT--TCT-----TTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCC--CCh-----hcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHH
Confidence 4568999999998876532 111 223457789899999999999997 555543 7899999888887775
Q ss_pred CC--------CC-----eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 018401 131 KP--------HD-----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 197 (356)
Q Consensus 131 ~~--------gd-----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~ 197 (356)
.+ || +|+++.++|.++.. .+...|+.++.+ +.+.+++.+|+++|++++.+ ++++|+
T Consensus 139 ~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~--------~~~~~G~~~~~v--~~~~~~~~~d~~~l~~~i~~-~t~~v~ 207 (502)
T 3hbx_A 139 RKWQNKRKAEGKPVDKPNIVTGANVQVCWEK--------FARYFEVELKEV--KLSEGYYVMDPQQAVDMVDE-NTICVA 207 (502)
T ss_dssp HHHHHHHHHTTCCCSCCEEEEETTCCHHHHH--------HHHHTTCEEEEE--CCBTTBCSCCHHHHHHHCCT-TEEEEE
T ss_pred HHHhHHHHhcCCCCCCcEEEEcCCchHHHHH--------HHHHcCceeEEE--ecCCCcCcCCHHHHHHHHhh-CCEEEE
Confidence 54 77 89999977766433 445667777666 45533478999999999987 788888
Q ss_pred Ec-CCC-CCCcccHHHHHHHHHHc------CCEEEEeccchhhhccc--CCCC--CCCCCccEEEeCCCCcCCCCCc-eE
Q 018401 198 AG-ASA-YARLYDYERIRKVCNKQ------KAIMLADMAHISGLVAA--GVIP--SPFEYADVVTTTTHKSLRGPRG-AM 264 (356)
Q Consensus 198 l~-~~n-~g~~~~l~~I~~la~~~------g~~vivD~a~~~g~~~~--~~~~--~~l~~~D~~~~s~~K~l~gp~g-G~ 264 (356)
++ ++| +|.+.|+++|.++|+++ |+++++|+||+.+..+. .... ....++|++++++|||+++|.| |+
T Consensus 208 ~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~ 287 (502)
T 3hbx_A 208 AILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGW 287 (502)
T ss_dssp EEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred EecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEE
Confidence 77 666 89999999999999999 99999999998554321 1111 1123699999999999989988 88
Q ss_pred EEEecC
Q 018401 265 IFFRKG 270 (356)
Q Consensus 265 l~~~~~ 270 (356)
++++++
T Consensus 288 ~~~~~~ 293 (502)
T 3hbx_A 288 VIWRNK 293 (502)
T ss_dssp EEESSG
T ss_pred EEEeCH
Confidence 888763
No 66
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.87 E-value=2.6e-21 Score=181.99 Aligned_cols=230 Identities=13% Similarity=0.021 Sum_probs=161.7
Q ss_pred HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC-CCCccccCCCchHHH
Q 018401 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGGSLSGSPSN 122 (356)
Q Consensus 46 ~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~v~v~~sgs~a~ 122 (356)
++.|+|..++++ +|+.|++++.+.+.+....+|+.. ... ++++++++++|+ +++++++++|+++++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-------~~~----~l~~~la~~~g~~~~~~i~~~~g~t~a~ 98 (367)
T 3euc_A 30 HGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVP-------SSE----ALRAKLKEVMQVPAGMEVLLGNGSDEII 98 (367)
T ss_dssp TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCCC-------CHH----HHHHHHHHHHTCCTTCEEEEEEHHHHHH
T ss_pred CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC-------cHH----HHHHHHHHHhCCCCcceEEEcCCHHHHH
Confidence 356899888875 589999999998864211133221 233 455888999999 777888899999999
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 201 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~ 201 (356)
..++.+++++||+|++..++|.++.. .+...|.+++.+ +.+ +++.+|+++|++++++.++++|+++ ++
T Consensus 99 ~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~ 167 (367)
T 3euc_A 99 SMLALAAARPGAKVMAPVPGFVMYAM--------SAQFAGLEFVGV--PLR-ADFTLDRGAMLAAMAEHQPAIVYLAYPN 167 (367)
T ss_dssp HHHHHHTCCTTCEEEEEESCSCCSCH--------HHHTTTCEEEEE--ECC-TTSCCCHHHHHHHHHHHCCSEEEEESSC
T ss_pred HHHHHHHcCCCCEEEEcCCCHHHHHH--------HHHHcCCeEEEe--cCC-CCCCCCHHHHHHHhhccCCCEEEEcCCC
Confidence 98999999999999999977765533 344567666555 555 3578999999999986689999987 77
Q ss_pred C-CCCcc---cHHHHHHHHHHc--CCEEEEeccchhhhcccCC-CCCCCCCccEEEeCCCCcCC-CCCceEEEEecCcch
Q 018401 202 A-YARLY---DYERIRKVCNKQ--KAIMLADMAHISGLVAAGV-IPSPFEYADVVTTTTHKSLR-GPRGAMIFFRKGVKE 273 (356)
Q Consensus 202 n-~g~~~---~l~~I~~la~~~--g~~vivD~a~~~g~~~~~~-~~~~l~~~D~~~~s~~K~l~-gp~gG~l~~~~~~~~ 273 (356)
| +|.+. ++++|+++|++| |+++|+|++|+... .... ......+.++++.|+||+.. |.+.|+++.++
T Consensus 168 nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~---- 242 (367)
T 3euc_A 168 NPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFA-QESWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGDP---- 242 (367)
T ss_dssp TTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSS-SCCSGGGGGTCTTEEEEEECCCTTSCSCCEEEEEECH----
T ss_pred CCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhc-ccchHHHHhhCCCEEEEecchhhcccccCceeeeeCH----
Confidence 7 88775 577888889999 99999999986321 1111 00011135688999999721 22238888866
Q ss_pred hccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 274 INKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 274 ~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
++.+.+..... ..+++.+..+++.++++.
T Consensus 243 ----------~~~~~~~~~~~---~~~~~~~~~~a~~~~l~~ 271 (367)
T 3euc_A 243 ----------QWLEQLDKVRP---PYNVNVLTEATALFALEH 271 (367)
T ss_dssp ----------HHHHHHGGGCC---SSCCCHHHHHHHHHHHTT
T ss_pred ----------HHHHHHHHhCC---CCCCCHHHHHHHHHHhcC
Confidence 55555544322 245777777777777765
No 67
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.87 E-value=7.2e-22 Score=188.01 Aligned_cols=236 Identities=17% Similarity=0.175 Sum_probs=161.3
Q ss_pred cCCeeecCCCC---CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHH
Q 018401 47 KGLELIPSENF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~~~~---~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~ 123 (356)
..|+|..+... .++.+++++.+.+.. +..++...++..+. .....++++.+++++|++ + .+++++|++++.
T Consensus 46 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~---~~~~~~l~~~la~~~g~~-~-~i~~~sGs~a~~ 119 (401)
T 1fc4_A 46 HVINFCANNYLGLANHPDLIAAAKAGMDS-HGFGMASVRFICGT---QDSHKELEQKLAAFLGME-D-AILYSSCFDANG 119 (401)
T ss_dssp EEEECCCSCTTSCTTCHHHHHHHHHHHHH-HCSCCCSCHHHHCC---BHHHHHHHHHHHHHHTCS-E-EEEESCHHHHHH
T ss_pred cEEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCCCcccCC---cHHHHHHHHHHHHHhCCC-c-EEEeCChHHHHH
Confidence 45677666332 389999999988765 32222222221110 233445678899999987 4 345667788888
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEE
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVA 198 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~-----~~k~v~l 198 (356)
.++.+++++||.|+++.+.|+++.. .+...|.+++.+ + ..|+++|++++++. ++++|++
T Consensus 120 ~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~--~------~~d~~~l~~~l~~~~~~~~~~~~v~~ 183 (401)
T 1fc4_A 120 GLFETLLGAEDAIISDALNHASIID--------GVRLCKAKRYRY--A------NNDMQELEARLKEAREAGARHVLIAT 183 (401)
T ss_dssp TTHHHHCCTTCEEEEETTCCHHHHH--------HHHTSCSEEEEE--C------TTCHHHHHHHHHHHHHTTCSSEEEEE
T ss_pred HHHHHHcCCCCEEEEcchhHHHHHH--------HHHHcCCceEEE--C------CCCHHHHHHHHHHhhccCCCceEEEE
Confidence 8888999999999999988865543 334456555444 3 24789999888652 6889888
Q ss_pred c-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhc-ccCCC-C--CCCC-CccEEEeCCCCcCCCCCceEEEEecCc
Q 018401 199 G-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLV-AAGVI-P--SPFE-YADVVTTTTHKSLRGPRGAMIFFRKGV 271 (356)
Q Consensus 199 ~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~-~~~~~-~--~~l~-~~D~~~~s~~K~l~gp~gG~l~~~~~~ 271 (356)
+ ++| +|.+.|+++|.++|+++|+++|+|++|+.|.. +.+.. . .++. +.|++++|+||+++|+.||++++++
T Consensus 184 ~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~~~-- 261 (401)
T 1fc4_A 184 DGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARK-- 261 (401)
T ss_dssp ESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEECH--
T ss_pred eCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEcCH--
Confidence 7 666 89999999999999999999999999976765 21100 0 1111 4799999999999677789999876
Q ss_pred chhccCCcchhhhHHHhhccccCCCC-CCCCcHHHHHHHHHHHHHHhc
Q 018401 272 KEINKQGKEVFYDYEEKINQAVFPGL-QGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 272 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~al~~Al~~~~~ 318 (356)
++.+.+.....+.. .++++....+++.++++.+.+
T Consensus 262 ------------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 297 (401)
T 1fc4_A 262 ------------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA 297 (401)
T ss_dssp ------------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT
T ss_pred ------------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc
Confidence 44444432211111 347788888888889988754
No 68
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.87 E-value=5.3e-22 Score=190.21 Aligned_cols=262 Identities=11% Similarity=0.063 Sum_probs=180.3
Q ss_pred hcccccccChHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccC-CCCCCCCccCCCchhHHHHHHHHHH
Q 018401 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKY-SEGYPGARYYGGNEYIDMAESLCQK 99 (356)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (356)
+++++..+++..+..+.+. ....+.|+|..+++. +++.|++++.+.+.... ..+| +...+..++++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y------~~~~g~~~lr~~la~ 78 (422)
T 3fvs_A 6 QARRLDGIDYNPWVEFVKL-ASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQY------TKTFGYPPLTKILAS 78 (422)
T ss_dssp SCGGGTTCCCCHHHHHHHH-HHTSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSC------CCTTCCHHHHHHHHH
T ss_pred HHHHhhccCccHHHHHHHH-hhcCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCC------CCCCCCHHHHHHHHH
Confidence 3455667777777777664 334578899877764 68999999999887521 1123 222345678888888
Q ss_pred HHHHHcCC--CC-CccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEeccc----
Q 018401 100 RALEAFRL--DP-EKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL---- 172 (356)
Q Consensus 100 ~la~~~g~--~~-~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---- 172 (356)
++.+.+|. ++ +++++++|+++++..++.+++++||+|+++.+.|.++.. .+...|..+..+++..
T Consensus 79 ~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~~~ 150 (422)
T 3fvs_A 79 FFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEP--------MTMMAGGRPVFVSLKPGPIQ 150 (422)
T ss_dssp HHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECBCCCCC
T ss_pred HHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHH--------HHHHcCCEEEEEeccccccc
Confidence 88888886 45 577779999999998999999999999999977765432 3445566665564432
Q ss_pred C-----CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcc---cHHHHHHHHHHcCCEEEEeccchhhhccc----CC
Q 018401 173 N-----ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAA----GV 238 (356)
Q Consensus 173 ~-----~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~I~~la~~~g~~vivD~a~~~g~~~~----~~ 238 (356)
+ ..++.+|+++|++++++ ++++|+++ ++| +|.+. ++++|.++|++||+++|+|++|+...... .+
T Consensus 151 ~G~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 229 (422)
T 3fvs_A 151 NGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISI 229 (422)
T ss_dssp SSSCCBGGGSBCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCG
T ss_pred ccccccccCCCCCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCCh
Confidence 0 02346899999999986 88999887 777 88777 58899999999999999999997532211 11
Q ss_pred CCCC-CCCccEEEeCCCCcCC--CCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 239 IPSP-FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 239 ~~~~-l~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
.... ..+.++++.|++|+++ |.+.|+++.++ ++.+.+.... .....+.+.+..+++.++++.
T Consensus 230 ~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------------~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~ 294 (422)
T 3fvs_A 230 ASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD--------------HIMKHLRTVH-QNSVFHCPTQSQAAVAESFER 294 (422)
T ss_dssp GGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH--------------HHHHHHHHHH-HTTTCCCCHHHHHHHHHHHHH
T ss_pred hhcccccCcEEEEecchhccCCccceEEEEEeCH--------------HHHHHHHHHH-hhccCCCCcHHHHHHHHHHhh
Confidence 1111 0135688999999874 23338888876 3444433221 112345567777777777764
No 69
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.87 E-value=3.4e-21 Score=189.56 Aligned_cols=174 Identities=18% Similarity=0.132 Sum_probs=136.1
Q ss_pred CchhHHHHHHHHHHHHHHHcCCC--CCccccCCCchHHHHHHHHhhcC--------------CCCeeeecCCCCCcccCc
Q 018401 86 GNEYIDMAESLCQKRALEAFRLD--PEKWGGSLSGSPSNFQVYTALLK--------------PHDRIMALDLPHGGHLSH 149 (356)
Q Consensus 86 ~~~~~~~l~~~~~~~la~~~g~~--~~~v~v~~sgs~a~~~~l~al~~--------------~gd~Vl~~~~~~~~~~~~ 149 (356)
......++++++++|+++++|.+ ++.+++++|||+++..++.++.. +++.|+++...|.++..
T Consensus 129 ~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~- 207 (511)
T 3vp6_A 129 IAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKK- 207 (511)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHH-
T ss_pred cCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHH-
Confidence 34667889999999999999997 34666799999988877776643 57889999988877654
Q ss_pred ccccccccccccce---eeEEEecccCCCCCCCCHHHHHHHhhhcC-----CcEEEEc-CCC-CCCcccHHHHHHHHHHc
Q 018401 150 GYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLFR-----PKLIVAG-ASA-YARLYDYERIRKVCNKQ 219 (356)
Q Consensus 150 ~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~i~~~~-----~k~v~l~-~~n-~g~~~~l~~I~~la~~~ 219 (356)
.+...|. .++.+ +.+ +++.+|+++|++++.+.+ +++|+++ ++| +|.+.|+++|+++|++|
T Consensus 208 -------~~~~~g~g~~~~~~v--~~d-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~ 277 (511)
T 3vp6_A 208 -------AGAALGFGTDNVILI--KCN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKY 277 (511)
T ss_dssp -------HHHHTTSCGGGEEEE--CBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHH
T ss_pred -------HHHHcCCCCCcEEEe--ecC-CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHc
Confidence 3344454 45555 555 458999999999997621 7788887 666 89999999999999999
Q ss_pred CCEEEEeccchhhhcccCCCC---CCCCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 220 KAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 220 g~~vivD~a~~~g~~~~~~~~---~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
|+++++|++|+.|.....-.. .+..++|++++++||||++|.| |+++++++
T Consensus 278 ~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~ 332 (511)
T 3vp6_A 278 NLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK 332 (511)
T ss_dssp TCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST
T ss_pred CCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCH
Confidence 999999999998877432111 1223579999999999999988 99998875
No 70
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.87 E-value=5.6e-22 Score=190.40 Aligned_cols=241 Identities=12% Similarity=0.067 Sum_probs=169.6
Q ss_pred HcCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC--CCCCccccCCCchHH
Q 018401 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGGSLSGSPS 121 (356)
Q Consensus 46 ~~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~v~v~~sgs~a 121 (356)
++.|+|..+++ +.+|.|++++.+.+.... .+|+.. ..++++++++++++.+| ++++++++++|++++
T Consensus 61 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~--------~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea 131 (421)
T 3l8a_A 61 PELLQMWVADMDFLPVPEIKEAIINYGREHI-FGYNYF--------NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPA 131 (421)
T ss_dssp TTCEECCSSCCCSCCCHHHHHHHHHHHHHCC-SSCBCC--------CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCeeecccCCCCCCCCHHHHHHHHHHHhcCC-cCCCCC--------CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHH
Confidence 45788876665 358999999999886521 133221 25788889999999999 567777779999999
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
+..++.+++++||+|++..+.|.++.. .+...|..+..+++.....++.+|+++|++++++.++++|+++ +
T Consensus 132 ~~~a~~~~~~~gd~Vi~~~~~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p 203 (421)
T 3l8a_A 132 ISIALQAFSEKGDAVLINSPVYYPFAR--------TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSP 203 (421)
T ss_dssp HHHHHHHHSCTEEEEEEEESCCHHHHH--------HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESS
T ss_pred HHHHHHHhcCCCCEEEECCCCcHHHHH--------HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCC
Confidence 999999999999999999977655432 3445676666665432223346899999999984489999888 7
Q ss_pred CC-CCCc---ccHHHHHHHHHHcCCEEEEeccchhhhccc----CCCCCC--CCCccEEEeCCCCcCC--CCCceEEEEe
Q 018401 201 SA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSP--FEYADVVTTTTHKSLR--GPRGAMIFFR 268 (356)
Q Consensus 201 ~n-~g~~---~~l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~~--l~~~D~~~~s~~K~l~--gp~gG~l~~~ 268 (356)
+| +|.+ .++++|+++|++||+++|+|++|+...... .+.... ..+.++++.|++|+++ |.+.|+++++
T Consensus 204 ~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~ 283 (421)
T 3l8a_A 204 HNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQ 283 (421)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECC
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcC
Confidence 67 7866 578999999999999999999996432211 111111 0135588999999884 3333888887
Q ss_pred cCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 269 KGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 269 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
++ ++.+.+........+++++.++.+++.++++..
T Consensus 284 ~~-------------~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~ 318 (421)
T 3l8a_A 284 NE-------------SLRRKFQYRQLANNQHEVPTVGMIATQAAFQYG 318 (421)
T ss_dssp SH-------------HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC
T ss_pred CH-------------HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhcc
Confidence 32 444444332212234678888888888888753
No 71
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.87 E-value=1e-21 Score=186.80 Aligned_cols=237 Identities=13% Similarity=0.125 Sum_probs=164.0
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC--CCCCccccCCCchHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGGSLSGSPSN 122 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~v~v~~sgs~a~ 122 (356)
+.++|..+++. +++.|.+++.+.+.... .+|+. . ..++++++.+++++.+| ++++++++++|+++++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~ 102 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDETV-LGYTG------P--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAV 102 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHCC-CSSBC------C--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcCC-CCCCC------C--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHH
Confidence 57888877763 57899999998886421 12221 1 46788788888888888 5677888899999999
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC--CCCCCHHHHHHHhhhcCCcEEEEc-
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES--TGYIDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--~~~~d~~~l~~~i~~~~~k~v~l~- 199 (356)
..++.+++++||+|+++.++|.++.. .+...|.++..+ +.+.+ ++.+|+++|++++++.++++|+++
T Consensus 103 ~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~--~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~ 172 (399)
T 1c7n_A 103 FNAVREFTKPGDGVIIITPVYYPFFM--------AIKNQERKIIEC--ELLEKDGYYTIDFQKLEKLSKDKNNKALLFCS 172 (399)
T ss_dssp HHHHHHHCCTTCEEEECSSCCTHHHH--------HHHTTTCEEEEC--CCEEETTEEECCHHHHHHHHTCTTEEEEEEES
T ss_pred HHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCCEEEec--ccccCCCCEEEcHHHHHHHhccCCCcEEEEcC
Confidence 99999999999999999977765532 334456555545 44211 235899999999973378998887
Q ss_pred CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc----CCCCCCC--CCccEEEeCCCCcCCCC--CceEEEE
Q 018401 200 ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSPF--EYADVVTTTTHKSLRGP--RGAMIFF 267 (356)
Q Consensus 200 ~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~~l--~~~D~~~~s~~K~l~gp--~gG~l~~ 267 (356)
++| +|.+.| +++|.++|++||+++|+|++|+...... .+....- .+.++++.|++|+++.| +.|++++
T Consensus 173 ~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 252 (399)
T 1c7n_A 173 PHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIII 252 (399)
T ss_dssp SBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEEC
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEE
Confidence 777 888777 8999999999999999999997543211 1111100 12568899999987422 3489988
Q ss_pred ecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 268 RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 268 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
+++ ++.+.+........+++++.+..+++.++++.
T Consensus 253 ~~~-------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (399)
T 1c7n_A 253 KNP-------------DIRERFTKSRDATSGMPFTTLGYKACEICYKE 287 (399)
T ss_dssp CCH-------------HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred CCH-------------HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence 652 34444433211222346777777777777764
No 72
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.87 E-value=5.4e-22 Score=189.47 Aligned_cols=206 Identities=15% Similarity=0.053 Sum_probs=148.0
Q ss_pred HcCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCc
Q 018401 46 WKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSG 118 (356)
Q Consensus 46 ~~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sg 118 (356)
++.|+|..+.+ +.++.+++++.+.+.... .+| +...+..++++++.+++.+.+|. +++++++++|+
T Consensus 38 ~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~ 110 (406)
T 1xi9_A 38 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-NYY------GDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAV 110 (406)
T ss_dssp CCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-CSC------CCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHH
T ss_pred CCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCCh
Confidence 45788887776 457899999998886521 122 22234567888888888877764 66777789999
Q ss_pred hHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 018401 119 SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 198 (356)
Q Consensus 119 s~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l 198 (356)
++++..++.+++++||+|++++++|.++.. .+...|..++.++++.+ +++.+|+++|++++++ ++++|++
T Consensus 111 ~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~-~~~~v~i 180 (406)
T 1xi9_A 111 TEALQLIFGALLDPGDEILVPGPSYPPYTG--------LVKFYGGKPVEYRTIEE-EDWQPDIDDIRKKITD-RTKAIAV 180 (406)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHTTCEEEEEEEEGG-GTSEECHHHHHHHCCT-TEEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCccHHH--------HHHHcCCEEEEeecCCC-cCCcCCHHHHHHhhCc-CceEEEE
Confidence 999998999999999999999977755432 34456766655643321 2456899999999987 7898888
Q ss_pred c-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc---CCCCCCCCCc-cEEEeCCCCcCCCC--CceEEE-
Q 018401 199 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA---GVIPSPFEYA-DVVTTTTHKSLRGP--RGAMIF- 266 (356)
Q Consensus 199 ~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~---~~~~~~l~~~-D~~~~s~~K~l~gp--~gG~l~- 266 (356)
+ ++| +|.+.+ +++|.++|+++|+++|+|++|+.+.... .+.... .+. |++++|+||+++.| +.|+++
T Consensus 181 ~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (406)
T 1xi9_A 181 INPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLT-KDVPVIVMNGLSKVYFATGWRLGYMYF 259 (406)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHC-SSSCEEEEEESTTTTCCGGGCCEEEEE
T ss_pred ECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcC-CCceEEEEeccccccCCCccEEEEEEE
Confidence 7 767 887665 8899999999999999999997654311 111111 235 88999999988522 238887
Q ss_pred -Eec
Q 018401 267 -FRK 269 (356)
Q Consensus 267 -~~~ 269 (356)
.++
T Consensus 260 ~~~~ 263 (406)
T 1xi9_A 260 VDPE 263 (406)
T ss_dssp ECTT
T ss_pred ecCc
Confidence 554
No 73
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.87 E-value=1.4e-21 Score=185.63 Aligned_cols=255 Identities=11% Similarity=0.021 Sum_probs=173.7
Q ss_pred ccccccChHHHHHHHHHHHH-----HHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKAR-----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~-----~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 97 (356)
++++.+.++.+..+....+. .++.|+|..+++. +|+.|++++.+.+.... +|+.. .+..++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~------~g~~~lr~~l 75 (396)
T 3jtx_A 4 TLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLHELE--KYPLT------AGLPELRQAC 75 (396)
T ss_dssp HHHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGGGGG--SCCCT------TCCHHHHHHH
T ss_pred hhhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhcc--CCCCC------CCcHHHHHHH
Confidence 34455566655555543322 2357899877764 57999999998875422 33332 3456788888
Q ss_pred HHHHHHHcCC---CCC-ccccCCCchHHHHHHHHhhcCCC-----CeeeecCCCCCcccCcccccccccccccceeeEEE
Q 018401 98 QKRALEAFRL---DPE-KWGGSLSGSPSNFQVYTALLKPH-----DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 168 (356)
Q Consensus 98 ~~~la~~~g~---~~~-~v~v~~sgs~a~~~~l~al~~~g-----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 168 (356)
.+++++.+|. +++ ++++++|+++++..++.+++++| |+|+++.++|.++.. .+...|.++..+
T Consensus 76 a~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~--------~~~~~g~~~~~v 147 (396)
T 3jtx_A 76 ANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEG--------ATLLGGGEIHFA 147 (396)
T ss_dssp HHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHH--------HHHHTTCEEEEE
T ss_pred HHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHH--------HHHHcCCEEEEe
Confidence 8999999895 477 88889999999998999999997 799999876654432 344567667666
Q ss_pred ecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHH---HHHHHHHHcCCEEEEeccchhhhcccCCCCCC-
Q 018401 169 PYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYE---RIRKVCNKQKAIMLADMAHISGLVAAGVIPSP- 242 (356)
Q Consensus 169 ~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~---~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~- 242 (356)
+ .+.+++.+|+++|++++.+ ++++|+++ ++| +|.+.+.+ +|.++|++||+++|+|++|+....... ...+
T Consensus 148 ~--~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~ 223 (396)
T 3jtx_A 148 N--CPAPSFNPDWRSISEEVWK-RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGN-KPLGC 223 (396)
T ss_dssp E--CCTTTCCCCGGGSCHHHHH-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTC-CCCCH
T ss_pred e--cCCCCCccCHHHHHHhhcc-CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCchH
Confidence 4 4434557899999999987 89999987 777 88777655 588999999999999999875322210 0000
Q ss_pred ---------CCCccEEEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHH
Q 018401 243 ---------FEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAV 311 (356)
Q Consensus 243 ---------l~~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 311 (356)
-.+.++++.|++|.++.| +.|+++.++ ++.+.+..... ...++++.+..+++.+
T Consensus 224 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~~~~~~~-~~~~~~~~~~~~a~~~ 288 (396)
T 3jtx_A 224 LQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDA--------------ELLKNFLLYRT-YHGSAMSIPVQRASIA 288 (396)
T ss_dssp HHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECH--------------HHHHHHHHHHH-HHTCCCCHHHHHHHHH
T ss_pred HhhhhhcccccCcEEEEeccccccCCcccceEEEEeCH--------------HHHHHHHHHHh-hcccCCCHHHHHHHHH
Confidence 023679999999975433 338887766 34444332110 1124667777777777
Q ss_pred HHH
Q 018401 312 ALK 314 (356)
Q Consensus 312 Al~ 314 (356)
+++
T Consensus 289 ~l~ 291 (396)
T 3jtx_A 289 AWD 291 (396)
T ss_dssp HHH
T ss_pred HhC
Confidence 775
No 74
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.87 E-value=6.5e-22 Score=189.17 Aligned_cols=246 Identities=13% Similarity=0.044 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CC
Q 018401 34 IADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DP 109 (356)
Q Consensus 34 ~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~ 109 (356)
++.+..+.....++.|+|..+++. .++.+++++ +.+.... .+| +...+..++++++.+++.+.+|. ++
T Consensus 31 ~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~-~~y------~~~~g~~~l~~~la~~~~~~~g~~~~~ 102 (409)
T 2gb3_A 31 LVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERI-YENKPEV-VYY------SHSAGIWELREAFASYYKRRQRVDVKP 102 (409)
T ss_dssp GHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHH-HHTCCSS-CCC------CCTTCCHHHHHHHHHHHHHTSCCCCCG
T ss_pred HHHHHHHHHhcCCCEEeccCCCCCCCCCHHHHHHH-HHHhcCC-CCC------CCCCCcHHHHHHHHHHHHHHhCCCCCH
Confidence 344443332223457888877764 578899999 8775421 123 22234567888888888877774 56
Q ss_pred CccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHh
Q 018401 110 EKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSA 188 (356)
Q Consensus 110 ~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i 188 (356)
+++++++||++++..++.+++++||+|+++.++|.++.. .+...|.+++.++ .+. +++.+ +++|++++
T Consensus 103 ~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~-~~~l~~~l 171 (409)
T 2gb3_A 103 ENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNA--------FAKIAGVKLIPVT--RRMEEGFAI-PQNLESFI 171 (409)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHHTCEEEEEE--CCGGGTSCC-CTTGGGGC
T ss_pred HHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEec--cCCCCCCcc-HHHHHHhh
Confidence 777779999999999999999999999999987765533 3445676665554 432 23344 78888888
Q ss_pred hhcCCcEEEEc-CCC-CCCcc---cHHHHHHHHHHcCCEEEEeccchhhhcccCCCC--CCCCCccEEEeCCCCcCCCCC
Q 018401 189 TLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPFEYADVVTTTTHKSLRGPR 261 (356)
Q Consensus 189 ~~~~~k~v~l~-~~n-~g~~~---~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~--~~l~~~D~~~~s~~K~l~gp~ 261 (356)
++ ++++|+++ ++| +|.+. ++++|.++|+++|+++|+|++|+.+........ ..+.+.|++++|+||+++.|.
T Consensus 172 ~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 250 (409)
T 2gb3_A 172 NE-RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACG 250 (409)
T ss_dssp CT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGG
T ss_pred Cc-CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCcc
Confidence 76 78988887 777 88765 588999999999999999999986543211111 011247999999999884332
Q ss_pred --ceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018401 262 --GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 314 (356)
Q Consensus 262 --gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~ 314 (356)
.|+++++++ ++.+.+....... . +++.+..+++.++|+
T Consensus 251 ~r~G~~~~~~~-------------~l~~~l~~~~~~~-~-~~~~~~~~a~~~~l~ 290 (409)
T 2gb3_A 251 ARVGCLITRNE-------------ELISHAMKLAQGR-L-APPLLEQIGSVGLLN 290 (409)
T ss_dssp GCCEEEECSCH-------------HHHHHHHHHHHHS-C-CCCHHHHHHHHHHHT
T ss_pred ceEEEEEECcH-------------HHHHHHHHHHhcc-C-CCCHHHHHHHHHHHh
Confidence 388888772 2333332211111 1 556666666667764
No 75
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.86 E-value=9.1e-22 Score=185.82 Aligned_cols=253 Identities=11% Similarity=0.082 Sum_probs=169.4
Q ss_pred cCh-HHHHHHHHHHHHH----HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHH
Q 018401 30 VDP-EIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (356)
Q Consensus 30 ~~~-~~~~~~~~~~~~~----~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la 102 (356)
+++ +.|..+.+..... ++.|+|..+++. ++|.+++++.+.+......+ |+...+..++++++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~~~~~l~~~ia~~~~ 77 (376)
T 2dou_A 4 VPEPSVFLVVDEAKRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYG------YCLKSCTLPFLEEAARWYE 77 (376)
T ss_dssp CCCTHHHHHHHHHHHHHHHTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSS------CCCHHHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHhhccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCC------CCCCCCCHHHHHHHHHHHH
Confidence 344 5666555543332 357888887765 47999999998875421112 2322456778877777777
Q ss_pred HHcCCC--CC-ccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCC
Q 018401 103 EAFRLD--PE-KWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 179 (356)
Q Consensus 103 ~~~g~~--~~-~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 179 (356)
+.+|++ ++ ++++++|+++++..++.+++++||+|+++.+.|.++.. .+...|.++..++ .+ +++.+
T Consensus 78 ~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~~-~~~~~ 146 (376)
T 2dou_A 78 GRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFG--------AARVASLRTFLIP--LR-EDGLA 146 (376)
T ss_dssp HHHSCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHTTCEEEEEC--BC-TTSSB
T ss_pred HHhCCCCCCCccEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHH--------HHHHcCCEEEEee--CC-CCCCC
Confidence 777984 44 77779999999998999999999999999977655432 3445576665554 42 45568
Q ss_pred CHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc---CCCCC-CCCCccEEE
Q 018401 180 DYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA---GVIPS-PFEYADVVT 250 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~---~~~~~-~l~~~D~~~ 250 (356)
|+++|++++.+ ++++|+++ ++| +|.+.+ +++|.++|++||+++|+|++|+.+.... ..... ...+.++++
T Consensus 147 d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 225 (376)
T 2dou_A 147 DLKAVPEGVWR-EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVEL 225 (376)
T ss_dssp CGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEE
T ss_pred CHHHHHHhhcc-CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEE
Confidence 99999998876 78999987 777 887766 6788899999999999999997654321 11110 111367889
Q ss_pred eCCCCcCC--CCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 251 TTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 251 ~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
.|++|+++ |.+.|+++.++ ++.+.+....... ..+.+.+..+++.++++.
T Consensus 226 ~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~~~-~~~~~~~~~~a~~~~l~~ 277 (376)
T 2dou_A 226 FSLSKSYNLAGFRLGFALGSE--------------EALARLERVKGVI-DFNQYAGVLRMGVEALKT 277 (376)
T ss_dssp EEHHHHHTCGGGCCEEEEECH--------------HHHHHHHHHHHHH-CCCSCHHHHHHHHHHHTS
T ss_pred ecchhhcCChhheeEEEecCH--------------HHHHHHHHHHHhc-ccCCCHHHHHHHHHHHhC
Confidence 99999874 33348888876 4444433211111 124466666666666654
No 76
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.86 E-value=5.7e-21 Score=182.16 Aligned_cols=260 Identities=14% Similarity=0.055 Sum_probs=169.8
Q ss_pred hcccccccChHHHHHHHHHHHH--HH--cCCeeecCCCC----CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHH
Q 018401 23 LNAPLEVVDPEIADIIEHEKAR--QW--KGLELIPSENF----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 94 (356)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~--~~--~~i~L~~~~~~----~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 94 (356)
++++...+.+..+..+...... .+ +.|+|..+.+. +++.+.+++.+.+.... .... |+...+..+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~----~~~~-y~~~~~~~~l~ 81 (407)
T 2zc0_A 7 LAGRANWIKGSALADVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEP----KSVM-YTPANGIPELR 81 (407)
T ss_dssp SCGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCG----GGGS-CCCTTCCHHHH
T ss_pred hhhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcc----cccc-CCCCCCCHHHH
Confidence 4455556666555555443331 23 56888755432 56789999988876521 0011 33334457788
Q ss_pred HHHHHHHHHHcC--CCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEeccc
Q 018401 95 SLCQKRALEAFR--LDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 172 (356)
Q Consensus 95 ~~~~~~la~~~g--~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 172 (356)
+++.+++.+.+| ++++++++++|+++++..++.+++++||+|+++.+.|.++.. .+...|.+++.++ .
T Consensus 82 ~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~ 151 (407)
T 2zc0_A 82 EELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLL--------AFEQLGAKIEGVP--V 151 (407)
T ss_dssp HHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTTCEEEEEE--E
T ss_pred HHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHHcCCEEEEcc--c
Confidence 788888877778 467777779999999999999999999999999977655432 3445676665554 4
Q ss_pred CCCCCCCCHHHHHHHhh----h-cCCcEEE-Ec-CCC-CCCcccHH---HHHHHHHHcCCEEEEeccchhhhcccC----
Q 018401 173 NESTGYIDYDQLEKSAT----L-FRPKLIV-AG-ASA-YARLYDYE---RIRKVCNKQKAIMLADMAHISGLVAAG---- 237 (356)
Q Consensus 173 ~~~~~~~d~~~l~~~i~----~-~~~k~v~-l~-~~n-~g~~~~l~---~I~~la~~~g~~vivD~a~~~g~~~~~---- 237 (356)
+ ++ .+|+++|+++++ + .++++|+ ++ ++| +|.+.|.+ +|.++|++||+++|+|++|+.+.....
T Consensus 152 ~-~~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 229 (407)
T 2zc0_A 152 D-ND-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVP 229 (407)
T ss_dssp E-TT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCC
T ss_pred C-CC-CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCC
Confidence 4 22 389999999987 4 2678875 44 666 89888876 899999999999999999976543211
Q ss_pred CCCCCCCCccEEEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 238 VIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 238 ~~~~~l~~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
+......+.++++.|++|+++ | +.|++++++ ++.+.+........++ .+.....++.++++.
T Consensus 230 ~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 293 (407)
T 2zc0_A 230 LKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEG--------------EILKKVLMQKQPIDFC-APAISQYIALEYLKR 293 (407)
T ss_dssp GGGGCSSCCEEEEEESTTTTC-TTSCCEEEECCH--------------HHHHHHHHHHTTTTSS-SCHHHHHHHHHHHHT
T ss_pred hhhcCCCCCEEEEcccccccC-CCcceEEEecCH--------------HHHHHHHHHHHhhcCC-CCHHHHHHHHHHHHc
Confidence 111110124578889999986 4 358998876 4555444322222233 355555556666654
No 77
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.86 E-value=1e-21 Score=188.37 Aligned_cols=226 Identities=13% Similarity=0.133 Sum_probs=153.2
Q ss_pred ccChHHH---HHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHc
Q 018401 29 VVDPEIA---DIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 105 (356)
Q Consensus 29 ~~~~~~~---~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~ 105 (356)
++++++. +.+.++.+.+...+.+++.+|. +.|++++.+........+......|+ ..+ .+++++.+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n~--~~Vl~a~~~~~~~~~~~~~~~gy~Y~-~~g----~~~Le~~lA~l~ 87 (427)
T 3hvy_A 15 NINERVLELYERALNDVEKEFKYYDEIREYNQ--LKVLKAFQEERISESHFTNSSGYGYN-DIG----RDSLDRVYANIF 87 (427)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCTT-CHH----HHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHhcccCcCCCCC-chh----HHHHHHHHHHHh
Confidence 4566666 4444444445566677666664 78999998864432100111111111 122 344558899999
Q ss_pred CCCCCcccc--CCCchHHHHHHHHhhcCCCCeeeecC-CCCCcccCcc--cc-cccccccccceeeEEEecccCCCCCCC
Q 018401 106 RLDPEKWGG--SLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHG--YQ-TDTKKISAVSIFFETMPYRLNESTGYI 179 (356)
Q Consensus 106 g~~~~~v~v--~~sgs~a~~~~l~al~~~gd~Vl~~~-~~~~~~~~~~--~~-~~~~~~~~~g~~~~~v~~~~~~~~~~~ 179 (356)
|++.. +++ ++||++++..++.++++|||+|++.+ +.|+++.... .. .....+...|..++.+ +. +++.+
T Consensus 88 g~e~a-lv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v--~~--~~~~~ 162 (427)
T 3hvy_A 88 NTESA-FVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMV--DL--KDGKV 162 (427)
T ss_dssp TCSEE-EEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEEC--CC--BTTBC
T ss_pred CCCce-EEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEe--cC--CCCCc
Confidence 99765 332 78999999989999999999999998 7776553110 00 0001223356556555 43 35789
Q ss_pred CHHHHHHHhhh-cCCcEEEEcC-----CC-CCCcccHHHHHHHHHH--cCCEEEEeccchhhhcccCCCCCCCCCccEEE
Q 018401 180 DYDQLEKSATL-FRPKLIVAGA-----SA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFEYADVVT 250 (356)
Q Consensus 180 d~~~l~~~i~~-~~~k~v~l~~-----~n-~g~~~~l~~I~~la~~--~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~ 250 (356)
|++++++++++ .++|+|+++. +| +|.+.|+++|+++|++ +|+++++|++|+.+......... ++|+++
T Consensus 163 d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~~~---gaDiv~ 239 (427)
T 3hvy_A 163 DINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPTDV---GADIIA 239 (427)
T ss_dssp CHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGGGG---TCSEEE
T ss_pred CHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCCCccc---CCeEEE
Confidence 99999999983 3899998864 34 6788999999999999 89999999999877532221122 489999
Q ss_pred eCCCCcCCC---CCceEEEEec
Q 018401 251 TTTHKSLRG---PRGAMIFFRK 269 (356)
Q Consensus 251 ~s~~K~l~g---p~gG~l~~~~ 269 (356)
+|+||+++| |.||+++.++
T Consensus 240 ~S~sK~lgg~g~~~GG~i~~~~ 261 (427)
T 3hvy_A 240 GSLIKNIGGGIATTGGYIAGKE 261 (427)
T ss_dssp EETTSGGGTTTCCSCEEEEECH
T ss_pred ECCcccccccccceEEEEEECH
Confidence 999999987 7789999887
No 78
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.86 E-value=1.1e-21 Score=186.55 Aligned_cols=234 Identities=15% Similarity=0.123 Sum_probs=162.9
Q ss_pred cCCeeecCCC-C--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHH
Q 018401 47 KGLELIPSEN-F--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~~~-~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~ 123 (356)
+.|+|..+++ . +++.+++++.+.+... ..++...++ ..+..++.+++++++++++|.+ ++++++||++++.
T Consensus 44 ~~idl~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~~~~~~---~~g~~~~~~~l~~~la~~~g~~--~v~~~~ggt~a~~ 117 (398)
T 3a2b_A 44 RVLMFGSNSYLGLTTDTRIIKAAQDALEKY-GTGCAGSRF---LNGTLDIHVELEEKLSAYVGKE--AAILFSTGFQSNL 117 (398)
T ss_dssp EEEECSCSCTTCGGGCHHHHHHHHHHHHHH-CSCCCSBTT---TTCCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHH
T ss_pred eEEEeecccccCCCCCHHHHHHHHHHHHHc-CCCCCCcCc---ccCCcHHHHHHHHHHHHHhCCC--cEEEECCHHHHHH
Confidence 4578877765 2 6889999999888652 112221111 1223456678889999999974 6777999999999
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc---CCcEEEEc-
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLIVAG- 199 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~---~~k~v~l~- 199 (356)
.++.+++++||.|+++.++|+++.. .+...|.+++.+ +. +|+++|++++++. ++++|+++
T Consensus 118 ~~~~~~~~~gd~V~~~~p~~~~~~~--------~~~~~g~~~~~v--~~------~d~~~l~~~l~~~~~~~~~~v~~~~ 181 (398)
T 3a2b_A 118 GPLSCLMGRNDYILLDERDHASIID--------GSRLSFSKVIKY--GH------NNMEDLRAKLSRLPEDSAKLICTDG 181 (398)
T ss_dssp HHHHHSSCTTCEEEEETTCCHHHHH--------HHHHSSSEEEEE--CT------TCHHHHHHHHHTSCSSSCEEEEEES
T ss_pred HHHHHHhCCCCEEEECCccCHHHHH--------HHHHcCCceEEe--CC------CCHHHHHHHHHhhccCCceEEEEeC
Confidence 9999999999999999988876643 344556655544 32 4899999998763 68888887
Q ss_pred CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcc---cCCCC-CCCC-CccEEEeCCCCcCCCCCceEEEEecCcch
Q 018401 200 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA---AGVIP-SPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKE 273 (356)
Q Consensus 200 ~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~---~~~~~-~~l~-~~D~~~~s~~K~l~gp~gG~l~~~~~~~~ 273 (356)
++| +|.+.|+++|.++|++||+++|+|++|+.+... ..+.. .++. .+|++++|+||+++ |.||+++.++
T Consensus 182 ~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~---- 256 (398)
T 3a2b_A 182 IFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLGGFVAGDA---- 256 (398)
T ss_dssp BCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSCEEEEECH----
T ss_pred CCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCCcEEEeCH----
Confidence 666 899999999999999999999999999876531 11100 1111 26999999999875 6679988876
Q ss_pred hccCCcchhhhHHHhhccccCC-CCCCCCcHHHHHHHHHHHHHHh
Q 018401 274 INKQGKEVFYDYEEKINQAVFP-GLQGGPHNHTITGLAVALKQVC 317 (356)
Q Consensus 274 ~~~~g~~~~~~~~~~~~~~~~~-~~~gt~~~~~~~al~~Al~~~~ 317 (356)
++.+.+.....+ ...++++....+++.++++.+.
T Consensus 257 ----------~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~ 291 (398)
T 3a2b_A 257 ----------DVIDFLKHNARSVMFSASMTPASVASTLKALEIIQ 291 (398)
T ss_dssp ----------HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHh
Confidence 444443321111 1124556666666667787753
No 79
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.86 E-value=3.4e-21 Score=182.28 Aligned_cols=234 Identities=15% Similarity=0.146 Sum_probs=160.6
Q ss_pred cCCeeecCCC---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHH
Q 018401 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~ 123 (356)
..|++..+++ ++++.+++++.+.+.. +..+++..++..+. .....++++.+++++|++ +.+++++|++++.
T Consensus 40 ~~id~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~---~~~~~~l~~~la~~~g~~--~~i~~~sGt~a~~ 113 (384)
T 1bs0_A 40 QYLNFSSNDYLGLSHHPQIIRAWQQGAEQ-FGIGSGGSGHVSGY---SVVHQALEEELAEWLGYS--RALLFISGFAANQ 113 (384)
T ss_dssp EEEECSCCCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCC---CHHHHHHHHHHHHHHTCS--EEEEESCHHHHHH
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHH-hCCCCCCcCcccCC---hHHHHHHHHHHHHHhCCC--cEEEeCCcHHHHH
Confidence 4688888775 4689999999998865 21122222221111 123345668889999986 3455667788888
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-C
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-A 200 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k~v~l~-~ 200 (356)
.++.+++++||.|+++.+.|+++.. .+...|.+++.+ +. .|+++|++++++. ++++|+++ +
T Consensus 114 ~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~--~~------~d~~~l~~~l~~~~~~~~~v~~~~~ 177 (384)
T 1bs0_A 114 AVIAAMMAKEDRIAADRLSHASLLE--------AASLSPSQLRRF--AH------NDVTHLARLLASPCPGQQMVVTEGV 177 (384)
T ss_dssp HHHHHHCCTTCEEEEETTCCHHHHH--------HHHTSSSEEEEE--CT------TCHHHHHHHHHSCCSSCEEEEEESB
T ss_pred HHHHHhCCCCcEEEEcccccHHHHH--------HHHHcCCCEEEe--CC------CCHHHHHHHHHhcCCCCeEEEEeCC
Confidence 8899999999999999988775543 333456555444 32 4799999988753 26777777 6
Q ss_pred CC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcc---cCC-CCCCCCCccEEEeCCCCcCCCCCceEEEEecCcchhc
Q 018401 201 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA---AGV-IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN 275 (356)
Q Consensus 201 ~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~---~~~-~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~ 275 (356)
+| +|.+.|+++|.++|++||+++|+|++|+.|... ..+ ...+ .+.|++++|+||+++ |+||++++++
T Consensus 178 ~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~di~~~s~sK~~~-~~GG~~~~~~------ 249 (384)
T 1bs0_A 178 FSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQK-VKPELLVVTFGKGFG-VSGAAVLCSS------ 249 (384)
T ss_dssp CTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTT-CCCSEEEEESSSTTS-SCCEEEEECH------
T ss_pred CCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcC-CCCcEEEeeccchhh-ccCcEEEeCH------
Confidence 66 899999999999999999999999999877532 110 0111 137999999999875 7789999876
Q ss_pred cCCcchhhhHHHhhccccCCCCC-CCCcHHHHHHHHHHHHHHhc
Q 018401 276 KQGKEVFYDYEEKINQAVFPGLQ-GGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~~~~~-gt~~~~~~~al~~Al~~~~~ 318 (356)
++.+.+.....+... ++++....+++.++++.+.+
T Consensus 250 --------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 285 (384)
T 1bs0_A 250 --------TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRS 285 (384)
T ss_dssp --------HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHS
T ss_pred --------HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhc
Confidence 444443321101112 35778888888888888763
No 80
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.86 E-value=3.5e-21 Score=183.09 Aligned_cols=210 Identities=11% Similarity=0.087 Sum_probs=152.0
Q ss_pred HcCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCC-CccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchH
Q 018401 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPG-ARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSP 120 (356)
Q Consensus 46 ~~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~ 120 (356)
++.|+|..+.+ ++++.+.+++.+.+.... +. ...|+...+..++++++.+++.+.+|. +++++++++|+++
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~----~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~ 110 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYD----SVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAA 110 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHSC----HHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHH
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcCC----ccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHH
Confidence 46788887655 357899999998886521 00 112222344578888888999988884 6778888999999
Q ss_pred HHHHHHHhhcCCC-CeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 018401 121 SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 199 (356)
Q Consensus 121 a~~~~l~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~ 199 (356)
++..++.+++++| |+|++..+.|.++.. .+...|.++..+ +.+.+++.+|+++|++++++ ++++|+++
T Consensus 111 al~~~~~~l~~~g~d~vl~~~p~~~~~~~--------~~~~~g~~~~~v--~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 179 (398)
T 3ele_A 111 SLSICFRALTSDAYDEFITIAPYFPEYKV--------FVNAAGARLVEV--PADTEHFQIDFDALEERINA-HTRGVIIN 179 (398)
T ss_dssp HHHHHHHHHCCSTTCEEEEESSCCTHHHH--------HHHHTTCEEEEE--CCCTTTSSCCHHHHHHTCCT-TEEEEEEC
T ss_pred HHHHHHHHHcCCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEE--ecCCcCCcCCHHHHHHHhCc-CCCEEEEc
Confidence 9998999999999 999999977765432 344567666555 55544568999999999987 89999997
Q ss_pred -CCC-CCCccc---HHHHHHHHHH------cCCEEEEeccchhhhcccCCCCC--CCCCccEEEeCCCCcCC--CCCceE
Q 018401 200 -ASA-YARLYD---YERIRKVCNK------QKAIMLADMAHISGLVAAGVIPS--PFEYADVVTTTTHKSLR--GPRGAM 264 (356)
Q Consensus 200 -~~n-~g~~~~---l~~I~~la~~------~g~~vivD~a~~~g~~~~~~~~~--~l~~~D~~~~s~~K~l~--gp~gG~ 264 (356)
++| +|.+.+ +++|+++|++ ||+++|+|++|+........... ...+.++++.|++|+++ |.+.|+
T Consensus 180 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 259 (398)
T 3ele_A 180 SPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGY 259 (398)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEE
Confidence 777 898777 6677788998 99999999999753221101010 11236799999999884 233399
Q ss_pred EEEecC
Q 018401 265 IFFRKG 270 (356)
Q Consensus 265 l~~~~~ 270 (356)
++++++
T Consensus 260 ~~~~~~ 265 (398)
T 3ele_A 260 VLVPDE 265 (398)
T ss_dssp EECCTT
T ss_pred EEEcch
Confidence 998875
No 81
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.86 E-value=2.4e-21 Score=185.32 Aligned_cols=261 Identities=14% Similarity=0.142 Sum_probs=165.1
Q ss_pred hcccccccChHHHHHHHHHHHH----HHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHH
Q 018401 23 LNAPLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (356)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (356)
+++++..+.++.+..+....+. .++.|+|..+++. +++.+++++.+.+......+| +...+..+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~l~~~ 83 (412)
T 2x5d_A 10 RFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGY------STSRGIPRLRRA 83 (412)
T ss_dssp -----------CHHHHHHHHHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------------CTTCCHHHHHH
T ss_pred hhHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCC------CCCCCcHHHHHH
Confidence 4455666666666655543321 1246888877764 578999999888764211122 222345678877
Q ss_pred HHHHHHHHcCC--CC-CccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 97 CQKRALEAFRL--DP-EKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 97 ~~~~la~~~g~--~~-~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
+.+++.+.+|+ ++ +++++++|+++++..++.+++++||+|+++.++|.++.. .+...|.++..+ +.+
T Consensus 84 ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~~--~~~ 153 (412)
T 2x5d_A 84 ISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIY--------GAVIAGAQVRSV--PLV 153 (412)
T ss_dssp HHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHHTCEEEEE--ECS
T ss_pred HHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEe--ecC
Confidence 77787777785 56 578789999999999999999999999999977765432 334556666555 444
Q ss_pred CC-CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc----CCCCCC-
Q 018401 174 ES-TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSP- 242 (356)
Q Consensus 174 ~~-~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~~- 242 (356)
.+ ++.+|+++|++++++ ++++|+++ ++| +|.+.+ +++|.++|++||+++|+|++|+.+.... .+....
T Consensus 154 ~~~~~~~d~~~l~~~i~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 232 (412)
T 2x5d_A 154 PGIDFFNELERAIRESIP-KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPG 232 (412)
T ss_dssp TTSCHHHHHHHHHHTEES-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTT
T ss_pred CccCCCCCHHHHHHhccc-CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccC
Confidence 33 234789999998876 89999887 777 887765 6789999999999999999998654321 111110
Q ss_pred CCCccEEEeCCCCcCC--CCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 243 FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 243 l~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
..+.|+++.|+||+++ |.+.|++++++ ++.+.+..... ...++.+.+..+++.++|+.
T Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~-~~~~~~~~~~~~a~~~~l~~ 292 (412)
T 2x5d_A 233 AKDIAVEFFTLSKSYNMAGWRIGFMVGNP--------------ELVSALARIKS-YHDYGTFTPLQVAAIAALEG 292 (412)
T ss_dssp GGGTEEEEEECC-CCSCTTSCCEEEEECH--------------HHHHHHHHHHH-HHCCCCCHHHHHHHHHHHHS
T ss_pred ccCcEEEEecCccccCCcccceEEEEcCH--------------HHHHHHHHHHh-hhccCCCHHHHHHHHHHHhC
Confidence 0247899999999884 33349998876 34443332110 11235566777766677754
No 82
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1e-21 Score=190.10 Aligned_cols=255 Identities=11% Similarity=0.106 Sum_probs=175.9
Q ss_pred cChHHHHHHHHHHH--------HHHcCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHH
Q 018401 30 VDPEIADIIEHEKA--------RQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (356)
Q Consensus 30 ~~~~~~~~~~~~~~--------~~~~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (356)
+++..|..+.+..+ ..++.|+|..+.+ ++|+.+.+++.+.+..... .+|+...+..++++++.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~ 106 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMV------NQYSPTRGRPSLINSLIK 106 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGG------GSCCCTTCCHHHHHHHHH
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCC------CCCCCCCCCHHHHHHHHH
Confidence 67778888777542 2336789887765 3579999999988764111 123333445678888888
Q ss_pred HHHHHcCC--CCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC--
Q 018401 100 RALEAFRL--DPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-- 175 (356)
Q Consensus 100 ~la~~~g~--~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-- 175 (356)
++.+.+|. +++++++++|+++++..++.++++|||+|+++.+.|.++.. .+...|..++.+++ +++
T Consensus 107 ~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v~~--~~~~~ 176 (447)
T 3b46_A 107 LYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIP--------NIELCGGKVVYVPI--NPPKE 176 (447)
T ss_dssp HHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEEE--ECCGG
T ss_pred HHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEEeC--CCccc
Confidence 88887875 55677779999999999999999999999999977765432 34456766666643 322
Q ss_pred ---------CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcc---cHHHHHHHHHHcCCEEEEeccchhhhccc---CC
Q 018401 176 ---------TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAA---GV 238 (356)
Q Consensus 176 ---------~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~I~~la~~~g~~vivD~a~~~g~~~~---~~ 238 (356)
++.+|+++|++++++ ++++|+++ ++| +|.+. ++++|+++|++||+++|+|++|+...... .+
T Consensus 177 ~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~ 255 (447)
T 3b46_A 177 LDQRNTRGEEWTIDFEQFEKAITS-KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRI 255 (447)
T ss_dssp GGTSCBCSTTSEECHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG
T ss_pred cccccccccCcccCHHHHHHhhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCH
Confidence 357899999999976 88999887 777 88765 58899999999999999999997533211 11
Q ss_pred CCC-C-CCCccEEEeCCCCcCCCC--CceEEEE-ecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHH
Q 018401 239 IPS-P-FEYADVVTTTTHKSLRGP--RGAMIFF-RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVAL 313 (356)
Q Consensus 239 ~~~-~-l~~~D~~~~s~~K~l~gp--~gG~l~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al 313 (356)
... + ..+.|+++.|+||+++.| +.|+++. ++ ++.+.+..... ....+.+.+..+++.++|
T Consensus 256 ~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~--------------~l~~~l~~~~~-~~~~~~~~~~~~a~~~aL 320 (447)
T 3b46_A 256 ATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNA--------------ELLSYAAKAHT-RICFASPSPLQEACANSI 320 (447)
T ss_dssp GGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCH--------------HHHHHHHHHHH-HHTSSCCHHHHHHHHHHH
T ss_pred HHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCH--------------HHHHHHHHHHh-hccCCCChHHHHHHHHHH
Confidence 111 0 014789999999987533 3499988 65 34443332110 012345666677777888
Q ss_pred HHH
Q 018401 314 KQV 316 (356)
Q Consensus 314 ~~~ 316 (356)
+..
T Consensus 321 ~~~ 323 (447)
T 3b46_A 321 NDA 323 (447)
T ss_dssp HHH
T ss_pred hCC
Confidence 765
No 83
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.86 E-value=8.6e-22 Score=186.00 Aligned_cols=238 Identities=13% Similarity=0.127 Sum_probs=163.4
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC--CCCCccccCCCchHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGGSLSGSPSN 122 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~v~v~~sgs~a~ 122 (356)
+.|+|..+++. +++.|++++.+.+.... .+|+.. ..++++++++++++.+| ++++++++++|+++++
T Consensus 25 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~--------~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~ 95 (383)
T 3kax_A 25 ELIHAWIADMDFEVPQPIQTALKKRIEHPI-FGYTLP--------PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPAL 95 (383)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHSCC-CCCCCC--------CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CeeecccccCCCCCCHHHHHHHHHHHhcCC-CCCCCC--------CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHH
Confidence 56888877764 58999999999887521 133221 24677788899999999 5777888899999999
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 201 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~ 201 (356)
..++.+++++||+|+++.++|.++.. .+...|.++..++++.+..++.+|+++|++++.+ ++++|+++ ++
T Consensus 96 ~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~ 166 (383)
T 3kax_A 96 STSIQAFTKENESVLVQPPIYPPFFE--------MVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ-GVKLMLLCSPH 166 (383)
T ss_dssp HHHHHHHCCTTCEEEECSSCCHHHHH--------HHHHTTCEEEECCCEEETTEEECCHHHHHHHHTT-TCCEEEEESSB
T ss_pred HHHHHHhCCCCCEEEEcCCCcHHHHH--------HHHHcCCEEEeccceecCCcEEEcHHHHHHHhCc-CCeEEEEeCCC
Confidence 98999999999999999977765432 3445676665554332211245899999999965 89999887 77
Q ss_pred C-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc----CCCCCCC--CCccEEEeCCCCcCCCC--CceEEEEec
Q 018401 202 A-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSPF--EYADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 202 n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~~l--~~~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
| +|.+.| +++|.++|++||+++|+|++|+...... .+....- .+.++++.|+||+++.| +.|++++++
T Consensus 167 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 246 (383)
T 3kax_A 167 NPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPN 246 (383)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC
T ss_pred CCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCC
Confidence 7 887766 5566677999999999999997543221 1111110 02458999999987422 238888743
Q ss_pred CcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 270 GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
+ ++.+.+.........++++.+..+++.++++.
T Consensus 247 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 279 (383)
T 3kax_A 247 E-------------KLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTE 279 (383)
T ss_dssp H-------------HHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTT
T ss_pred H-------------HHHHHHHHHHhhcccCCCCHHHHHHHHHHHHh
Confidence 2 44444433221223457788888877777754
No 84
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.86 E-value=2.9e-22 Score=191.38 Aligned_cols=260 Identities=10% Similarity=0.019 Sum_probs=169.6
Q ss_pred cccccccChHHHHHHHHHHHH--HHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHH
Q 018401 24 NAPLEVVDPEIADIIEHEKAR--QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (356)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~--~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (356)
++++..+.++.+..+.+.... .++.|+|..+++. +++.+++++.+.+......+|+. ..+..++++++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~~ia~ 96 (404)
T 2o1b_A 23 SNKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGA------FHGKEAFKQAIVD 96 (404)
T ss_dssp CHHHHTSCCCTTC-------CCCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCC------TTCCHHHHHHHHH
T ss_pred hhHhhhCCchHHHHHHHHHHhcCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHHH
Confidence 334444444444444433221 1246888877764 47899999988875421112322 2345678877888
Q ss_pred HHHHHcCCC--C-CccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCC
Q 018401 100 RALEAFRLD--P-EKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 176 (356)
Q Consensus 100 ~la~~~g~~--~-~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 176 (356)
++++.+|++ + +++++++|+++++..++.+++++||+|+++.+.|.++.. .+...|.++..+ +.+.++
T Consensus 97 ~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~v--~~~~~~ 166 (404)
T 2o1b_A 97 FYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLA--------GVLLADGKPVPL--NLEPPH 166 (404)
T ss_dssp HHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHH--------HHHHTTCEEEEE--ECCTTT
T ss_pred HHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHCCCEEEEe--ccCccc
Confidence 888877974 3 677779999999998999999999999999977765543 334556666555 444334
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc---CCCCCC-CCCcc
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA---GVIPSP-FEYAD 247 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~---~~~~~~-l~~~D 247 (356)
+.+|+++|++++++ ++++|+++ ++| +|.+.+ +++|.++|+++|+++|+|++|+...... .+.... ..+.|
T Consensus 167 ~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 245 (404)
T 2o1b_A 167 YLPDWSKVDSQIID-KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVA 245 (404)
T ss_dssp CCCCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHE
T ss_pred CcCCHHHHHHhhcc-CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCE
Confidence 56899999998876 78999987 777 887775 7789999999999999999997643211 111110 01357
Q ss_pred EEEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 248 VVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 248 ~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
+++.|+||+++.| +.|+++.++ ++.+.+..... ...++.+.+..+++.++++.
T Consensus 246 i~~~s~sK~~g~~G~r~G~~~~~~--------------~~~~~l~~~~~-~~~~~~~~~~~~a~~~~l~~ 300 (404)
T 2o1b_A 246 IEIYSLSKGYNMSGFRVGFAVGNK--------------DMIQALKKYQT-HTNAGMFGALQDAAIYALNH 300 (404)
T ss_dssp EEEEESTTTTTCGGGCCEEEEECH--------------HHHHHHHHHHH-HHCCCCCHHHHHHHHHHHHH
T ss_pred EEEEecchhccCchhheEeEecCH--------------HHHHHHHHHHh-hccCCCCHHHHHHHHHHHhc
Confidence 9999999988423 338888876 44444332111 11245667777777777765
No 85
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.86 E-value=9.3e-22 Score=187.67 Aligned_cols=259 Identities=12% Similarity=0.038 Sum_probs=173.4
Q ss_pred cccccChHHHHHHHHHHHHHHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHH
Q 018401 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (356)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~ 103 (356)
++..+++..+..+.+. ....+.|+|..+++. +++.|++++.+.+......+|+. ..+..++++++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~l~~~la~~~~~ 76 (410)
T 3e2y_A 4 RIEGLDSNVWVEFTKL-AADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTR------GFGHPALVKALSCLYGK 76 (410)
T ss_dssp GGTTCCCCHHHHTTTT-TTSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCC------TTCCHHHHHHHHHHHHH
T ss_pred hhccCCccHHHHHHHH-hcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCC------CCChHHHHHHHHHHHHH
Confidence 3445555555555432 223467899877764 68999999999886532223332 23356788788888888
Q ss_pred HcCC--CC-CccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC-------
Q 018401 104 AFRL--DP-EKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN------- 173 (356)
Q Consensus 104 ~~g~--~~-~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~------- 173 (356)
.+|. ++ +++++++|+++++..++.+++++||+|+++.+.|.++.. .+...|..+..+++...
T Consensus 77 ~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~~~g~~~ 148 (410)
T 3e2y_A 77 IYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEP--------MVRMAGAVPVFIPLRSKPTDGMKW 148 (410)
T ss_dssp HHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEECCCCSSCC
T ss_pred HhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEEeccccccccccc
Confidence 7775 45 677779999999998999999999999999977765532 34455666666654321
Q ss_pred -CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCc---ccHHHHHHHHHHcCCEEEEeccchhhhccc----CCCCCC-
Q 018401 174 -ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSP- 242 (356)
Q Consensus 174 -~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~---~~l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~~- 242 (356)
..++.+|++++++++++ ++++|+++ ++| +|.+ .++++|+++|++||+++|+|++|+...... .+....
T Consensus 149 ~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 227 (410)
T 3e2y_A 149 TSSDWTFDPRELESKFSS-KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPG 227 (410)
T ss_dssp BGGGEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTT
T ss_pred cccCCcCCHHHHHhhcCC-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCC
Confidence 12346899999999876 88999887 777 8876 478899999999999999999996432211 111111
Q ss_pred CCCccEEEeCCCCcCC--CCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 243 FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 243 l~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
..+.++++.|++|+++ |.+.|+++.++ ++.+.+.... .....+.+.+..+++..+++.
T Consensus 228 ~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------------~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~ 287 (410)
T 3e2y_A 228 MWERTITIGSAGKTFSVTGWKLGWSIGPA--------------HLIKHLQTVQ-QNSFYTCATPLQAALAEAFWI 287 (410)
T ss_dssp CGGGEEEEEEHHHHSSCGGGCCEEEECCH--------------HHHHHHHHHH-HTTTCCCCHHHHHHHHHHHHH
T ss_pred ccCeEEEEecchhhcCCCCceEEEEEECH--------------HHHHHHHHHH-HhhccCCChHHHHHHHHHHHh
Confidence 0124588899999874 33338888876 4444433221 112345566777777777764
No 86
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.86 E-value=2.9e-21 Score=182.99 Aligned_cols=196 Identities=10% Similarity=0.106 Sum_probs=142.4
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHH-HHHcCCCCCccccCCCchHHHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA-LEAFRLDPEKWGGSLSGSPSNFQVY 126 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l-a~~~g~~~~~v~v~~sgs~a~~~~l 126 (356)
.|.+..+.-++++++++++.+.+.+.+ +.. | ..... ++++.+ ++++|. ..++++++||++++..++
T Consensus 4 ~i~~~~p~~~~~~~i~~a~~~~~~~~~---~~~---~--~~~~~----~l~~~~~a~~~g~-~~~~v~~~sgt~al~~al 70 (377)
T 3ju7_A 4 NIPFLRASTVPVIEYLDELKEIDASHI---YTN---Y--GPINQ----RFEQTIMSGFFQN-RGAVTTVANATLGLMAAI 70 (377)
T ss_dssp CBCSCCCCCCCGGGGHHHHHHHHHHTC---CSS---S--CHHHH----HHHHHHHHHTSTT-CSEEEEESCHHHHHHHHH
T ss_pred eeeccCCCCCCcHHHHHHHHHHHHcCC---ccc---C--CHHHH----HHHHHHHHHHhCC-CCeEEEeCCHHHHHHHHH
Confidence 466665665678899999999887632 110 0 12233 455888 999993 334566899999988888
Q ss_pred Hhh-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHh-hhcC--CcEEEEcCCC
Q 018401 127 TAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA-TLFR--PKLIVAGASA 202 (356)
Q Consensus 127 ~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i-~~~~--~k~v~l~~~n 202 (356)
.++ ++|||+|++++++|.++.. .+...|++++.+ +++++++.+|++++++++ ++ + ||+|+. +|
T Consensus 71 ~~l~~~~Gd~Vi~~~~~~~~~~~--------~~~~~G~~~~~v--~~~~~~~~~d~~~l~~~i~~~-~~~tk~v~~--~~ 137 (377)
T 3ju7_A 71 QLKKRKKGKYALMPSFTFPATPL--------AAIWCGLEPYFI--DISIDDWYMDKTVLWDKIEEL-KEEVAIVVP--YA 137 (377)
T ss_dssp HHHSCTTCCEEEEESSSCTHHHH--------HHHHTTCEEEEE--CBCTTTCSBCHHHHHHHHHHH-GGGEEEECC--BC
T ss_pred HHcCCCCcCEEEECCCCcHHHHH--------HHHHcCCEEEEE--ecCCccCCcCHHHHHHHHhcC-CCCceEEEE--EC
Confidence 888 9999999999988877654 334567666555 555456789999999988 44 6 888774 44
Q ss_pred -CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCC-CCCCCccEEEeCCCCcCCCCCceEEEEecC
Q 018401 203 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFEYADVVTTTTHKSLRGPRGAMIFFRKG 270 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~-~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~ 270 (356)
+|...|+++|.++|+ +|++||+|++|+.|....+... ..+..++++++++||+++++.||+++++++
T Consensus 138 ~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~ 206 (377)
T 3ju7_A 138 TFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNE 206 (377)
T ss_dssp GGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCH
T ss_pred CCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCH
Confidence 788899999999999 9999999999998875432211 112235666777899998766688887764
No 87
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.86 E-value=7.5e-21 Score=176.52 Aligned_cols=223 Identities=13% Similarity=0.089 Sum_probs=157.2
Q ss_pred HHcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHH
Q 018401 45 QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 45 ~~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~ 122 (356)
.++.|+|..++++ ++|.|++++.+.+.... +|+. .+.. ++++.+++++|++++++++++|+++++
T Consensus 15 ~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~--~y~~-------~~~~----~lr~~la~~~~~~~~~i~~t~G~~~~l 81 (337)
T 3p1t_A 15 AAQAVCLAFNENPEAVEPRVQAAIAAAAARIN--RYPF-------DAEP----RVMRKLAEHFSCPEDNLMLVRGIDECF 81 (337)
T ss_dssp CCCCEECSSCCCCSCCCHHHHHHHHHHGGGTT--SCCT-------THHH----HHHHHHHHHHTSCGGGEEEESHHHHHH
T ss_pred CCCceEeeCCCCCCCCCHHHHHHHHHhhhhhc--cCCC-------CchH----HHHHHHHHHhCcCHHHEEEeCCHHHHH
Confidence 3467999999886 58999999998776521 3321 2333 455888889999888888899999999
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 201 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~ 201 (356)
..++.++ +||+|+++.++|.++.. .+...|.++..+ +.+ +++.+|+++++++ . ++++++++ ++
T Consensus 82 ~~~~~~~--~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~--~-~~~~v~i~~p~ 145 (337)
T 3p1t_A 82 DRISAEF--SSMRFVTAWPGFDGYRA--------RIAVSGLRHFEI--GLT-DDLLLDPNDLAQV--S-RDDCVVLANPS 145 (337)
T ss_dssp HHHHHHS--TTSEEEEESSSCSHHHH--------HHTTSCCEEEEE--CBC-TTSSBCHHHHTTC--C-TTEEEEEESSC
T ss_pred HHHHHhc--CCCeEEEeCCCcHHHHH--------HHHHcCCEEEEe--cCC-CCCCCCHHHHHhh--c-CCCEEEEeCCC
Confidence 8777776 99999999977765432 344567666555 555 4578999999875 2 67888887 77
Q ss_pred C-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCC--CCCceEEEEecCcchhccCC
Q 018401 202 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQG 278 (356)
Q Consensus 202 n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g 278 (356)
| +|.+.|+++|.++|+++++ +|+|++|+. ............+.++++.|++|+++ |.+.|+++.++
T Consensus 146 nptG~~~~~~~l~~l~~~~~~-~ivDea~~~-~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------- 214 (337)
T 3p1t_A 146 NPTGQALSAGELDQLRQRAGK-LLIDETYVD-YSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPS--------- 214 (337)
T ss_dssp TTTCCCCCHHHHHHHHHHCSE-EEEECTTGG-GSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCH---------
T ss_pred CCCCCCCCHHHHHHHHHhCCc-EEEECCChh-hccccccccccCCCEEEEeeCchhccCcchheEEEEeCH---------
Confidence 7 8999999999999999996 666999863 11111111122246899999999874 33348888876
Q ss_pred cchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 279 KEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
++.+.+... ...++++.+..+++.++++.
T Consensus 215 -----~~~~~l~~~---~~~~~~~~~~~~a~~~~l~~ 243 (337)
T 3p1t_A 215 -----ELIAAMKRK---QWFCNVGTLDLHALEAALDN 243 (337)
T ss_dssp -----HHHHHHHTT---SCTTCSCHHHHHHHHHHHTC
T ss_pred -----HHHHHHHhh---cCCCCCCHHHHHHHHHHhCC
Confidence 455555432 12356777777777777653
No 88
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.86 E-value=3.8e-21 Score=182.55 Aligned_cols=197 Identities=14% Similarity=0.124 Sum_probs=143.4
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVY 126 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l 126 (356)
+.++|..+.+.+++.+++++.+.+...+ +. ....... ++++.+++++|.+ ++++++||++++..++
T Consensus 23 ~~~~l~~~~p~~~~~~~~a~~~~~~~~~---~~-----~~~~~~~----~l~~~la~~~~~~--~~i~~~~gt~al~~~l 88 (391)
T 3dr4_A 23 DLPRISVAAPRLDGNERDYVLECMDTTW---IS-----SVGRFIV----EFEKAFADYCGVK--HAIACNNGTTALHLAL 88 (391)
T ss_dssp -----CCCCCCCCSSHHHHHHHHHHHTC---CS-----SCSHHHH----HHHHHHHHHHTCS--EEEEESSHHHHHHHHH
T ss_pred CCceeccCCCCCCHHHHHHHHHHHHcCC---cc-----CCChHHH----HHHHHHHHHhCCC--cEEEeCCHHHHHHHHH
Confidence 4577777777888999999998886522 11 0123333 4558888888887 4567889999999899
Q ss_pred Hhh-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CC
Q 018401 127 TAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YA 204 (356)
Q Consensus 127 ~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g 204 (356)
.++ +++||+|+++.++|.++.. .+...|.+++.+ +.+++++.+|+++|++++++ ++++|++ +| +|
T Consensus 89 ~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~--~~~~~~~~~d~~~l~~~~~~-~~~~v~~--~n~tG 155 (391)
T 3dr4_A 89 VAMGIGPGDEVIVPSLTYIASAN--------SVTYCGATPVLV--DNDPRTFNLDAAKLEALITP-RTKAIMP--VHLYG 155 (391)
T ss_dssp HHHTCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEE--CBCTTTCSBCGGGSGGGCCT-TEEEECC--BCGGG
T ss_pred HHcCCCCcCEEEECCCchHHHHH--------HHHHCCCEEEEE--ecCccccCcCHHHHHHhcCC-CceEEEE--ECCCC
Confidence 999 9999999999988877654 333456666555 55545678999999999876 7887774 44 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCceEEEEecC
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 270 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~ 270 (356)
...|+++|.++|+++|+++|+|++|+.|....+.....+..+++.+++.||+++|+.||+++.+++
T Consensus 156 ~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~g~gg~~~~~~~ 221 (391)
T 3dr4_A 156 QICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITTGEGGMITTNDD 221 (391)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCCBSCEEEEESCH
T ss_pred ChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCcCCcCCeEEEEECCH
Confidence 899999999999999999999999998876554322222234555555889998877788887763
No 89
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.86 E-value=6e-21 Score=181.04 Aligned_cols=239 Identities=13% Similarity=0.076 Sum_probs=162.1
Q ss_pred HcCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHH-HHHHHHHHHHHHcC--CCCCccccCCCchH
Q 018401 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM-AESLCQKRALEAFR--LDPEKWGGSLSGSP 120 (356)
Q Consensus 46 ~~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~la~~~g--~~~~~v~v~~sgs~ 120 (356)
++.|+|..+++ .+++.|.+++.+.+... ..+|+.. ..+ +++++.+++.+.+| ++++++++++|+++
T Consensus 28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--------~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~ 98 (390)
T 1d2f_A 28 ADLLPFTISDMDFATAPCIIEALNQRLMHG-VFGYSRW--------KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIY 98 (390)
T ss_dssp --CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCCCS--------CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHH
T ss_pred CCeeEeeecCCCCCCCHHHHHHHHHHHhCC-CCCCCCC--------ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHH
Confidence 35788876665 35799999999887642 1123221 346 78788888888888 57778878999999
Q ss_pred HHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 018401 121 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 121 a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~- 199 (356)
++.+++.+++++||+|+++.+.|.++.. .+...|..++.++++.+..++.+|+++|++++++.++++|+++
T Consensus 99 al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~ 170 (390)
T 1d2f_A 99 MVSELIRQWSETGEGVVIHTPAYDAFYK--------AIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCS 170 (390)
T ss_dssp HHHHHHHHSSCTTCEEEEEESCCHHHHH--------HHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEES
T ss_pred HHHHHHHHhcCCCCEEEEcCCCcHHHHH--------HHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeC
Confidence 9998999999999999999977655432 3445566665564332211235899999999975468888887
Q ss_pred CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC-CCC-CCCC-C-ccEEEeCCCCcCC--CCCceEEEEec
Q 018401 200 ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-VIP-SPFE-Y-ADVVTTTTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 200 ~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~-~~~-~~l~-~-~D~~~~s~~K~l~--gp~gG~l~~~~ 269 (356)
++| +|.+.+ +++|.++|++||+++|+|++|+....... ... ..+. . .|. +.|++|+++ |.+.|++++++
T Consensus 171 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~ 249 (390)
T 1d2f_A 171 PQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIEN 249 (390)
T ss_dssp SCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECS
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECC
Confidence 777 887766 88999999999999999999976432211 000 1111 1 277 999999874 22338888864
Q ss_pred CcchhccCCcchhhhHHHhhccccC-CCCCCCCcHHHHHHHHHHHHH
Q 018401 270 GVKEINKQGKEVFYDYEEKINQAVF-PGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~gt~~~~~~~al~~Al~~ 315 (356)
+ ++.+.+..... ...+++++.+..+++.++++.
T Consensus 250 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 283 (390)
T 1d2f_A 250 S-------------SSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQ 283 (390)
T ss_dssp H-------------HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHH
T ss_pred H-------------HHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhc
Confidence 2 34444332211 122357788887777777864
No 90
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.86 E-value=8.9e-21 Score=179.74 Aligned_cols=186 Identities=11% Similarity=0.144 Sum_probs=137.3
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCCCeee
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPHDRIM 137 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~gd~Vl 137 (356)
++++++++.+.+.... + .+ ....... ++++.+++++|.+ +. +++++|++++..++.++ +++||+|+
T Consensus 16 ~~~~~~a~~~~l~~~~---~---~~-~~~~~~~----~l~~~la~~~~~~-~~-i~~~sGt~al~~~l~~l~~~~gd~Vi 82 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQ---W---WR-MGGDEVN----SFEREFAAHHGAA-HA-LAVTNGTHALELALQVMGVGPGTEVI 82 (388)
T ss_dssp CHHHHHHHHHHHHTSC---C---BT-TTCSHHH----HHHHHHHHHTTCS-EE-EEESCHHHHHHHHHHHTTCCTTCEEE
T ss_pred CHHHHHHHHHHHHcCC---e---ee-cCCHHHH----HHHHHHHHHhCCC-eE-EEeCCHHHHHHHHHHHcCCCCcCEEE
Confidence 4899999999887521 0 11 1122333 4558889999986 33 44556699999899998 89999999
Q ss_pred ecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCcccHHHHHHHH
Q 018401 138 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVC 216 (356)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g~~~~l~~I~~la 216 (356)
++.++|.++.. .+...|..++.+ +++++++.+|+++|++++++ ++++|+ ++| +|.+.++++|.++|
T Consensus 83 ~~~~~~~~~~~--------~~~~~g~~~~~v--~~~~~~~~~d~~~l~~~i~~-~~~~v~--~~n~tG~~~~l~~i~~la 149 (388)
T 1b9h_A 83 VPAFTFISSSQ--------AAQRLGAVTVPV--DVDAATYNLDPEAVAAAVTP-RTKVIM--PVHMAGLMADMDALAKIS 149 (388)
T ss_dssp EESSSCTHHHH--------HHHHTTCEEEEE--CBCTTTCCBCHHHHHHHCCT-TEEEEC--CBCGGGCCCCHHHHHHHH
T ss_pred ECCCccHHHHH--------HHHHcCCEEEEE--ecCCCcCCCCHHHHHHhcCc-CceEEE--EeCCccCcCCHHHHHHHH
Confidence 99988877754 334556666555 55544578999999999976 788776 566 89999999999999
Q ss_pred HHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCceEEEEecC
Q 018401 217 NKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 270 (356)
Q Consensus 217 ~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~~ 270 (356)
+++|+++|+|++|+.|..+.+.....+..+++.++|.||+++|+.||+++++++
T Consensus 150 ~~~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~ 203 (388)
T 1b9h_A 150 ADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDG 203 (388)
T ss_dssp HHHTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTT
T ss_pred HHcCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCH
Confidence 999999999999998765522111111136778888899998888899998874
No 91
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.85 E-value=4.7e-21 Score=179.09 Aligned_cols=203 Identities=15% Similarity=0.123 Sum_probs=149.6
Q ss_pred HcCCeeecCCC-CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 46 WKGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 46 ~~~i~L~~~~~-~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+..+.|..+.+ ++++.|++++.+.+.. | ... .+..++++++++++++++|++++++++++||++++..
T Consensus 13 p~~i~l~~~~~~~~~~~v~~a~~~~~~~-~----~~~------~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~ 81 (359)
T 1svv_A 13 PKPYSFVNDYSVGMHPKILDLMARDNMT-Q----HAG------YGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLI 81 (359)
T ss_dssp --CEECSCSCSSCCCHHHHHHHHHHTTC-C----CCS------TTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHH
T ss_pred CeeEEecCCCcCCCCHHHHHHHHHHHhh-c----ccc------ccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHH
Confidence 34677765444 5689999999988763 2 111 1223566788899999999988888889999999999
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc------CCcEEEE
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF------RPKLIVA 198 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~------~~k~v~l 198 (356)
++.+++++||+|++++++|.++... . .+...|.+++.+ +.+ ++.+|+++|++++++. ++++|++
T Consensus 82 ~~~~~~~~gd~vl~~~~~~~~~~~~-~-----~~~~~g~~~~~v--~~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~~ 151 (359)
T 1svv_A 82 ACSLALRPWEAVIATQLGHISTHET-G-----AIEATGHKVVTA--PCP--DGKLRVADIESALHENRSEHMVIPKLVYI 151 (359)
T ss_dssp HHHHHCCTTEEEEEETTSHHHHSST-T-----HHHHTTCCEEEE--CCT--TSCCCHHHHHHHHHHSCSTTSCEEEEEEE
T ss_pred HHHHHhCCCCEEEEcccchHHHHHH-H-----HHhcCCCeeEEE--eCC--CCeecHHHHHHHHHHHHhccCCCceEEEE
Confidence 9999999999999999888766542 1 133456666555 443 4789999999999873 2789988
Q ss_pred c-CCCCCCccc---HHHHHHHHHHcCCEEEEeccc---hhhhcccCCCCCCC-CCccEEEeCCCCcCCCCCc-eEEEEec
Q 018401 199 G-ASAYARLYD---YERIRKVCNKQKAIMLADMAH---ISGLVAAGVIPSPF-EYADVVTTTTHKSLRGPRG-AMIFFRK 269 (356)
Q Consensus 199 ~-~~n~g~~~~---l~~I~~la~~~g~~vivD~a~---~~g~~~~~~~~~~l-~~~D~~~~s~~K~l~gp~g-G~l~~~~ 269 (356)
+ ++++|.+.| +++|.++|++||+++|+|++| +.|..+.+.....+ ..+|++++++||+ ++|.| |++++++
T Consensus 152 ~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~~~~ 230 (359)
T 1svv_A 152 SNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKA-GGMFGEALIILND 230 (359)
T ss_dssp ESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEECSG
T ss_pred EcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccC-CCCCceEEEEEcc
Confidence 8 533898887 889999999999999999999 44544322111000 1379999999996 77888 9998877
Q ss_pred C
Q 018401 270 G 270 (356)
Q Consensus 270 ~ 270 (356)
+
T Consensus 231 ~ 231 (359)
T 1svv_A 231 A 231 (359)
T ss_dssp G
T ss_pred c
Confidence 4
No 92
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.85 E-value=2.4e-22 Score=188.40 Aligned_cols=239 Identities=12% Similarity=0.101 Sum_probs=159.2
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCC---chhHHHHHHHHHHHHHHHcCCC-CCccccCCCc-hHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG---NEYIDMAESLCQKRALEAFRLD-PEKWGGSLSG-SPSN 122 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sg-s~a~ 122 (356)
.+++++++.++|+.|++++.+.+.. + .+++...|.. .....++.+++++++++++|++ ++++++++|+ ++++
T Consensus 4 ~~~~~~g~~~~p~~v~~a~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al 80 (360)
T 1w23_A 4 VFNFNAGPSALPKPALERAQKELLN-F--NDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQF 80 (360)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSS-S--TTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred eEeecCCCcCCCHHHHHHHHHHhhh-h--ccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHH
Confidence 5678888888999999999998864 2 1122111111 2344556678999999999996 4577777776 8999
Q ss_pred HHHHHhhcCC---CCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHH-HhhhcCCcEEEE
Q 018401 123 FQVYTALLKP---HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK-SATLFRPKLIVA 198 (356)
Q Consensus 123 ~~~l~al~~~---gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~-~i~~~~~k~v~l 198 (356)
.+++.+++.+ ||.|+++.++|.+. . .+...| +++.++ .+++++.+|++++++ ++++ ++|+|++
T Consensus 81 ~~~~~~l~~~~~~g~~vi~~~~~~~~~--------~-~~~~~g-~~~~v~--~~~~~~~~d~~~l~~~~i~~-~~k~v~~ 147 (360)
T 1w23_A 81 TMLPMNLLTKGTIGNYVLTGSWSEKAL--------K-EAKLLG-ETHIAA--STKANSYQSIPDFSEFQLNE-NDAYLHI 147 (360)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHHHH--------H-HHHTTS-EEEEEE--ECGGGTSCSCCCGGGCCCCT-TEEEEEE
T ss_pred HHHHHHhcCCCCcccEEEecchhHHHH--------H-HHHHhC-CeEEee--cccccCcCCccchHhhccCC-CCCEEEE
Confidence 9888888765 66677666444321 0 123346 666664 442244578888888 7866 8999988
Q ss_pred c-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhc
Q 018401 199 G-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 275 (356)
Q Consensus 199 ~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~ 275 (356)
+ ++| +|.+.+ + ++++||+++|+|++|+.|..+.++. ..|++++|+||++ ||.| |++++++++...+
T Consensus 148 ~~~~nptG~~~~--~---i~~~~~~~li~D~a~~~~~~~~~~~-----~~di~~~s~sK~~-~~~G~G~~~~~~~~~~~~ 216 (360)
T 1w23_A 148 TSNNTIYGTQYQ--N---FPEINHAPLIADMSSDILSRPLKVN-----QFGMIYAGAQKNL-GPSGVTVVIVKKDLLNTK 216 (360)
T ss_dssp ESEETTTTEECS--S---CCCCCSSCEEEECTTTTTSSCCCGG-----GCSEEEEETTTTT-SCTTCEEEEEEHHHHCSC
T ss_pred eCCCCCcceecc--c---ccccCCceEEEechhhcCCCCcCcc-----cCCEEEEEccccc-CCCCcEEEEEcHHHHhhc
Confidence 7 666 887766 3 3348999999999999887654332 2489999999977 5778 9999987531111
Q ss_pred --cCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 276 --KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 276 --~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
..++.. +...... .....++++...++++.++++++.+
T Consensus 217 ~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~al~~~~~ 256 (360)
T 1w23_A 217 VEQVPTML--QYATHIK---SDSLYNTPPTFSIYMLRNVLDWIKD 256 (360)
T ss_dssp CTTCCGGG--CHHHHHH---TTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCcchh--hhhhhhh---ccCCCCCCCHHHHHHHHHHHHHHHH
Confidence 001100 1110000 1123478999999999999988765
No 93
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.85 E-value=4.7e-22 Score=193.13 Aligned_cols=169 Identities=12% Similarity=0.096 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccccCCCch-HHHHHHHHhhcC--CCCeeeecCCCCCcccCcccccccccccccceeeE
Q 018401 90 IDMAESLCQKRALEAFRLDPEKWGGSLSGS-PSNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 166 (356)
Q Consensus 90 ~~~l~~~~~~~la~~~g~~~~~v~v~~sgs-~a~~~~l~al~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 166 (356)
..++++++++++++++|++++ +++++||| .++..++.++.. +|+.|++++++|.++.. .+...|.+++
T Consensus 131 ~~~~~~~~~~~la~~~g~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~--------~~~~~G~~~~ 201 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIK--------AVSFVGMNMR 201 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH--------HHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHH--------HHHHcCCCce
Confidence 567778899999999999876 67788899 566656665433 77889988888877432 3445677776
Q ss_pred EEeccc-CCCCCCCCHHHHHHHh-hh---cCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccch---hhhccc
Q 018401 167 TMPYRL-NESTGYIDYDQLEKSA-TL---FRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHI---SGLVAA 236 (356)
Q Consensus 167 ~v~~~~-~~~~~~~d~~~l~~~i-~~---~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~---~g~~~~ 236 (356)
.+++.. + +++.+|+++|++++ ++ .++.+|+++ ++| +|.+.|+++|+++|+++|+++++|+||+ .|..+.
T Consensus 202 ~v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~ 280 (456)
T 2z67_A 202 LVETVLDG-DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEK 280 (456)
T ss_dssp EECCEEET-TEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHH
T ss_pred EEEEeccC-CCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHH
Confidence 664321 3 45789999999999 42 366667666 656 8999999999999999999999998765 444443
Q ss_pred CCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEec
Q 018401 237 GVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRK 269 (356)
Q Consensus 237 ~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~ 269 (356)
+...... ++|++++|+|||+++|.| |++++++
T Consensus 281 ~~~~~~~-~~D~~~~s~hK~~~~p~g~G~l~~~~ 313 (456)
T 2z67_A 281 LKKAFKY-RVDAVVSSSDKNLLTPIGGGLVYSTD 313 (456)
T ss_dssp HHHHHTS-CCSEEEEEHHHHHCCCSSCEEEEESC
T ss_pred HHHhhCC-CCCEEEEcCCCCcCCCCCeEEEEEcC
Confidence 3221211 389999999999889988 9999965
No 94
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.85 E-value=3.4e-21 Score=184.75 Aligned_cols=221 Identities=14% Similarity=0.096 Sum_probs=147.9
Q ss_pred HHHHHHHHHHHHHcCCeeecCCCCCcHHHHHHHHhhhhc-cCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCcc
Q 018401 34 IADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTN-KYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKW 112 (356)
Q Consensus 34 ~~~~~~~~~~~~~~~i~L~~~~~~~~~~V~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v 112 (356)
+++.+.++...+...++..+..|. +.|++++.++... ... +. ...|..+..+. +++++.+++++|++.. +
T Consensus 22 ~~~~~~~~~~~~~~~~~~~a~~n~--~~Vl~A~~~~~~~~~~~-~~-~~gy~y~~~~~----~~Le~~lA~l~g~e~a-l 92 (427)
T 3i16_A 22 LYETAMNDIQNQFKILDDIREFNQ--LKVLNAFQEERISEAHF-TN-SSGYGYGDIGR----DSLDAVYARVFNTESA-L 92 (427)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGS-CC-CCTTCTTCHHH----HHHHHHHHHHHTCSEE-E
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCH--HHHHHHHHHhchhHHhc-CC-CCCCCCCHHHH----HHHHHHHHHHhCCcce-E
Confidence 344444443334444555555553 6799998875321 111 11 11111122233 3455889999999876 3
Q ss_pred cc--CCCchHHHHHHHHhhcCCCCeeeecC-CCCCcccCcc-cccc--cccccccceeeEEEecccCCCCCCCCHHHHHH
Q 018401 113 GG--SLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHG-YQTD--TKKISAVSIFFETMPYRLNESTGYIDYDQLEK 186 (356)
Q Consensus 113 ~v--~~sgs~a~~~~l~al~~~gd~Vl~~~-~~~~~~~~~~-~~~~--~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~ 186 (356)
++ ++||++++..++.++++|||+|++++ +.|+++.... .... ...+...|..++.+ +.+ +++.+|++++++
T Consensus 93 v~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v--~~~-~~g~~D~e~l~~ 169 (427)
T 3i16_A 93 VRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQV--DLK-EDGKPNLEEIEK 169 (427)
T ss_dssp EETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEEC--CCC-TTSSCCHHHHHH
T ss_pred EeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEe--cCc-cCCCcCHHHHHH
Confidence 33 78999999989999999999999998 7776654211 0000 01223346555444 555 457899999999
Q ss_pred Hhhh-cCCcEEEEcC-----CC-CCCcccHHHHHHHHHH--cCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcC
Q 018401 187 SATL-FRPKLIVAGA-----SA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 257 (356)
Q Consensus 187 ~i~~-~~~k~v~l~~-----~n-~g~~~~l~~I~~la~~--~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l 257 (356)
++++ .++|+|+++. +| +|.+.|+++|+++|++ +|+++++|++|+.+......... ++|++++|+||++
T Consensus 170 ~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~~---gaDiv~~S~sK~l 246 (427)
T 3i16_A 170 VLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDV---GADLIAGSLIKNI 246 (427)
T ss_dssp HHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGGG---TCSEEEEETTSGG
T ss_pred HhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCcccc---CCeEEEecCcccC
Confidence 9982 2899998864 44 6899999999999999 99999999999876532221122 4899999999999
Q ss_pred CC---CCceEEEEec
Q 018401 258 RG---PRGAMIFFRK 269 (356)
Q Consensus 258 ~g---p~gG~l~~~~ 269 (356)
+| +.||+++.++
T Consensus 247 gg~g~~~gG~i~~~~ 261 (427)
T 3i16_A 247 GGGIAPTGGYLAGTK 261 (427)
T ss_dssp GTTTCCSCEEEEECH
T ss_pred CCCCCceEEEEEECH
Confidence 87 7789999887
No 95
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.85 E-value=1.4e-20 Score=179.14 Aligned_cols=188 Identities=14% Similarity=0.139 Sum_probs=139.9
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCCC
Q 018401 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPHD 134 (356)
Q Consensus 56 ~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~gd 134 (356)
+.+++++++++.+.+...| ... .+ ....++++.+++++|. +++++++||++++..++.++ +++||
T Consensus 8 p~~~~~v~~a~~~~~~~~~----~~~------~g--~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~~~~l~~~~gd 73 (394)
T 1o69_A 8 PHMGGNELKYIEEVFKSNY----IAP------LG--EFVNRFEQSVKDYSKS--ENALALNSATAALHLALRVAGVKQDD 73 (394)
T ss_dssp ----CCHHHHHHHHHHHTT----TSC------TT--HHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHHHHHHcCC----ccC------CC--hHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHcCCCCCC
Confidence 3467789999988886532 111 11 2234566888888887 45677999999999999999 99999
Q ss_pred eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCCcccHHHH
Q 018401 135 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAGASAYARLYDYERI 212 (356)
Q Consensus 135 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k~v~l~~~n~g~~~~l~~I 212 (356)
+|+++.++|.++.. .+...|..++.+ +.+ +++.+|+++|++++++. ++++|++++ .+|...++++|
T Consensus 74 ~Vl~~~~~~~~~~~--------~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~-~~G~~~~l~~i 141 (394)
T 1o69_A 74 IVLASSFTFIASVA--------PICYLKAKPVFI--DCD-ETYNIDVDLLKLAIKECEKKPKALILTH-LYGNAAKMDEI 141 (394)
T ss_dssp EEEEESSSCGGGTH--------HHHHTTCEEEEE--CBC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC-GGGCCCCHHHH
T ss_pred EEEECCCccHHHHH--------HHHHcCCEEEEE--EeC-CCCCcCHHHHHHHHhcccCCceEEEEEC-CCCChhhHHHH
Confidence 99999988877754 233456666555 555 55789999999999763 589988874 47888999999
Q ss_pred HHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCceEEEEec
Q 018401 213 RKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 269 (356)
Q Consensus 213 ~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~ 269 (356)
.++|+++|+++|+|++|+.|..+.+.....+..+|+.++|.||+++++++|++++++
T Consensus 142 ~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~ 198 (394)
T 1o69_A 142 VEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKN 198 (394)
T ss_dssp HHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESC
T ss_pred HHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECC
Confidence 999999999999999998776654332112235899999999988766569999964
No 96
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.85 E-value=1.3e-20 Score=177.63 Aligned_cols=249 Identities=14% Similarity=0.024 Sum_probs=166.3
Q ss_pred ChHHHHHHHHHHHHHH---cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHc
Q 018401 31 DPEIADIIEHEKARQW---KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 105 (356)
Q Consensus 31 ~~~~~~~~~~~~~~~~---~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~ 105 (356)
+++.+..+.+..+..+ +.|+|..++++ +|+.|++++.+.+... .+|+. ..+..++++++.+++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~------~~g~~~lr~~la~~l~~~~ 76 (376)
T 3ezs_A 5 EPYPFERLRALLKEITPKKRGLDLGIGEPQFETPKFIQDALKNHTHSL--NIYPK------SAFEESLRAAQRGFFKRRF 76 (376)
T ss_dssp CCCHHHHHHHHHTTCCCSSCCCBCSSCCCCSCCCHHHHHHHHTTGGGG--GSCCC------TTCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHhhhccCCEEEeCCCCCCCCCCHHHHHHHHHhhhhc--CCCCC------CCCCHHHHHHHHHHHHHHh
Confidence 3444455544332211 56888877774 5789999998877431 13332 2345678888889998888
Q ss_pred CC--CCCccccCCCchHHHHHHHHhhcCC--CCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCH
Q 018401 106 RL--DPEKWGGSLSGSPSNFQVYTALLKP--HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 181 (356)
Q Consensus 106 g~--~~~~v~v~~sgs~a~~~~l~al~~~--gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~ 181 (356)
|+ +++++++++|+++++..++.+++++ ||+|+++.+.|.++.. .+...|..+..++ .+.+ ..+++
T Consensus 77 g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~--~~~~-~~~~~ 145 (376)
T 3ezs_A 77 KIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEG--------AAKFIKAKSLLMP--LTKE-NDFTP 145 (376)
T ss_dssp SCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CCGG-GTSCC
T ss_pred CCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHH--------HHHHcCCEEEEcc--cCCC-CCcch
Confidence 98 7778888999999999899999999 9999999977765432 3445676665564 4422 23344
Q ss_pred HHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCC-CC--------CCCcc
Q 018401 182 DQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SP--------FEYAD 247 (356)
Q Consensus 182 ~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~-~~--------l~~~D 247 (356)
++++++.+ ++++|+++ ++| +|.+.+ +++|.++|++||+++|+|++|+.......... .. ..+.+
T Consensus 146 -~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (376)
T 3ezs_A 146 -SLNEKELQ-EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNV 223 (376)
T ss_dssp -CCCHHHHH-HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTE
T ss_pred -hHHhhhcc-CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcE
Confidence 56667766 78999997 777 887776 66777789999999999999975433211000 00 11367
Q ss_pred EEEeCCCCcCC--CCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 248 VVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 248 ~~~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
+++.|++|+++ |.+.|+++.++ ++.+.+..... ...++.+.+..+++.++++.
T Consensus 224 i~~~s~sK~~g~~G~r~G~~~~~~--------------~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~ 278 (376)
T 3ezs_A 224 LVIHSLSKRSSAPGLRSGFIAGDS--------------RLLEKYKAFRA-YLGYTSANAIQKASEAAWLD 278 (376)
T ss_dssp EEEEESTTTTTCGGGCCEEEEECH--------------HHHHHHHHHHT-TTCCCCCHHHHHHHHHHHHC
T ss_pred EEEecchhccCCccceeEEEeeCH--------------HHHHHHHHHHh-hhcCCCChHHHHHHHHHHhC
Confidence 99999999884 22238888766 45554443211 12346677777777777764
No 97
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.85 E-value=4.1e-20 Score=174.19 Aligned_cols=233 Identities=12% Similarity=0.051 Sum_probs=164.6
Q ss_pred CCeeecCCCC--CcHHHHHHHHhhhhccC--CCCCCCCccCCCchhHHHHHHHHHHHHHHHcC--CCCCccccCCCchHH
Q 018401 48 GLELIPSENF--TSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGGSLSGSPS 121 (356)
Q Consensus 48 ~i~L~~~~~~--~~~~V~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~v~v~~sgs~a 121 (356)
.|+|..++++ +++.+.+++.+.+.... ..+|+ .... .++++++.+++.+.+| ++++++++++|++++
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~------~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~a 104 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDKIATELNRYP------ERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEI 104 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCC------CTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHhcccccccCC------CccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHH
Confidence 4888888774 57999999998876420 11222 1122 4777777777777655 466777779999999
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
+..++.+++++||+|+++.++|.++.. .+...|.+++.+ +.+ +++.+|++++++++++.++++|+++ +
T Consensus 105 l~~~~~~l~~~gd~Vl~~~~~y~~~~~--------~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~ 173 (369)
T 3cq5_A 105 LQQLLQAFGGPGRTALGFQPSYSMHPI--------LAKGTHTEFIAV--SRG-ADFRIDMDVALEEIRAKQPDIVFVTTP 173 (369)
T ss_dssp HHHHHHHHCSTTCEEEEEESSCTHHHH--------HHHHTTCEEEEE--ECC-TTSSCCHHHHHHHHHHHCCSEEEEESS
T ss_pred HHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCEEEEe--cCC-cCCCCCHHHHHHHhhccCCCEEEEeCC
Confidence 988999999999999999988765532 334556666555 444 4467899999999875478999887 7
Q ss_pred CC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCC-CCCC-ccEEEeCCCCcCCCC--CceEEEEecCcchhc
Q 018401 201 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFEY-ADVVTTTTHKSLRGP--RGAMIFFRKGVKEIN 275 (356)
Q Consensus 201 ~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~-~l~~-~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~ 275 (356)
+| +|.+.|+++|.++|+.+++++|+|++|+.+......... ...+ .++++.|+||+++.| +.|++++++
T Consensus 174 ~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~------ 247 (369)
T 3cq5_A 174 NNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP------ 247 (369)
T ss_dssp CTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT------
T ss_pred CCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH------
Confidence 77 899999999999999999999999999866532111110 1113 569999999988533 239999877
Q ss_pred cCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 276 KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
++.+.+..... ..+++.+..+++.++++.
T Consensus 248 --------~~~~~l~~~~~---~~~~~~~~~~a~~~~l~~ 276 (369)
T 3cq5_A 248 --------AFIDAVMLVRL---PYHLSALSQAAAIVALRH 276 (369)
T ss_dssp --------HHHHHHHTTSC---TTCSCHHHHHHHHHHHHT
T ss_pred --------HHHHHHHHcCC---CCCCCHHHHHHHHHHhcC
Confidence 55555543321 235677777777777764
No 98
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.85 E-value=1.2e-20 Score=181.65 Aligned_cols=209 Identities=10% Similarity=0.011 Sum_probs=150.4
Q ss_pred HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHH
Q 018401 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPS 121 (356)
Q Consensus 46 ~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a 121 (356)
++.|+|..++++ +++.|++++.+.+......+|+.. .+..++++++.+++.+.+|. +++++++++|++++
T Consensus 44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~------~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~a 117 (437)
T 3g0t_A 44 TKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNL------DGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQG 117 (437)
T ss_dssp CCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCT------TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred CCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCC------CChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHH
Confidence 367899887775 489999999998874221233332 33467887777887777775 56778789999999
Q ss_pred HHHHHHhhc--CCCC--eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 018401 122 NFQVYTALL--KPHD--RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 197 (356)
Q Consensus 122 ~~~~l~al~--~~gd--~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~ 197 (356)
+..++.+++ ++|| +|+++.++|.++.. .+...|.+++.+++ +.+++.+|+++|++++...++++|+
T Consensus 118 l~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~--------~~~~~g~~~~~v~~--~~~~~~~d~~~l~~~l~~~~~~~v~ 187 (437)
T 3g0t_A 118 CFVSFLVANRTHKNREYGTLFIDPGFNLNKL--------QCRILGQKFESFDL--FEYRGEKLREKLESYLQTGQFCSII 187 (437)
T ss_dssp HHHHHHHHTTSCTTCSCCEEEEESCCHHHHH--------HHHHHTCCCEEEEG--GGGCTTHHHHHHHHHHTTTCCCEEE
T ss_pred HHHHHHHHhcCCCCCccEEEEeCCCcHhHHH--------HHHHcCCEEEEEee--cCCCCccCHHHHHHHHhcCCceEEE
Confidence 998999998 9999 99999877655432 44456777766654 3345678999999999434899998
Q ss_pred Ec-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC--C-------CCCC-CCCccEEEeCCCCcCCCC--
Q 018401 198 AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG--V-------IPSP-FEYADVVTTTTHKSLRGP-- 260 (356)
Q Consensus 198 l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~--~-------~~~~-l~~~D~~~~s~~K~l~gp-- 260 (356)
++ ++| +|.+.+ +++|+++|++||+++|+|++|+....... + .... ..+.++++.|+||+++.|
T Consensus 188 l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 267 (437)
T 3g0t_A 188 YSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQ 267 (437)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGG
T ss_pred EeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccc
Confidence 87 777 887776 77789999999999999999975333211 1 1100 123679999999987422
Q ss_pred CceEEEEecC
Q 018401 261 RGAMIFFRKG 270 (356)
Q Consensus 261 ~gG~l~~~~~ 270 (356)
+.|+++++++
T Consensus 268 r~G~~~~~~~ 277 (437)
T 3g0t_A 268 RIGVLMISGK 277 (437)
T ss_dssp CCEEEEECHH
T ss_pred eeEEEEECHH
Confidence 2389988763
No 99
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.85 E-value=4.7e-21 Score=182.52 Aligned_cols=207 Identities=10% Similarity=0.007 Sum_probs=150.0
Q ss_pred CCeeecCC-C--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC--C-CccccCCCchHH
Q 018401 48 GLELIPSE-N--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--P-EKWGGSLSGSPS 121 (356)
Q Consensus 48 ~i~L~~~~-~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~--~-~~v~v~~sgs~a 121 (356)
.|+|..+. + ++++.|++++.+.+......+| +...+..++++++++++++++|.+ + +++++++||+++
T Consensus 41 ~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a 114 (407)
T 3nra_A 41 PVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAY------TEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGA 114 (407)
T ss_dssp CEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHS------CCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHH
T ss_pred eeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCc------CCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHH
Confidence 47776533 3 4688999999998864211112 222345678888999999999984 3 577779999999
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC---CCCCCCCHHHHHHHhhhcCCcEEEE
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN---ESTGYIDYDQLEKSATLFRPKLIVA 198 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~---~~~~~~d~~~l~~~i~~~~~k~v~l 198 (356)
+..++.+++++||+|+++.++|.++.. .+...|.+++.+++... .+++.+|+++|++++.+ ++++|++
T Consensus 115 ~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~ 185 (407)
T 3nra_A 115 LFLAVAATVARGDKVAIVQPDYFANRK--------LVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA-GARVFLF 185 (407)
T ss_dssp HHHHHHTTCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCEEEE
T ss_pred HHHHHHHhCCCCCEEEEcCCcccchHH--------HHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh-CCcEEEE
Confidence 998999999999999999987765532 44456766666644211 14568999999999987 8999888
Q ss_pred c-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc----CCCCC--CCCCccEEEeCCCCcCC--CCCceEE
Q 018401 199 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPS--PFEYADVVTTTTHKSLR--GPRGAMI 265 (356)
Q Consensus 199 ~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~--~l~~~D~~~~s~~K~l~--gp~gG~l 265 (356)
+ ++| +|.+.+ +++|+++|++||+++|+|++|+.+.... .+... ...+.++++.|++|+++ |.+.|++
T Consensus 186 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 265 (407)
T 3nra_A 186 SNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVA 265 (407)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEE
T ss_pred cCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEE
Confidence 7 777 898888 8899999999999999999997643321 11111 01135699999999875 2233888
Q ss_pred EEec
Q 018401 266 FFRK 269 (356)
Q Consensus 266 ~~~~ 269 (356)
+.++
T Consensus 266 ~~~~ 269 (407)
T 3nra_A 266 FGSR 269 (407)
T ss_dssp EECH
T ss_pred EcCH
Confidence 8876
No 100
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.85 E-value=2e-20 Score=184.28 Aligned_cols=173 Identities=14% Similarity=0.113 Sum_probs=135.6
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-------C-CCC------eeeecCCCCCcccCcccc
Q 018401 87 NEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL-------K-PHD------RIMALDLPHGGHLSHGYQ 152 (356)
Q Consensus 87 ~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~-------~-~gd------~Vl~~~~~~~~~~~~~~~ 152 (356)
.....++++++++++++++|++++++++++|||+++..++.++. + +|| .|+++..+|.++...+
T Consensus 143 s~~~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~-- 220 (515)
T 2jis_A 143 APVFVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGA-- 220 (515)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHH--
T ss_pred chHHHHHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHH--
Confidence 35567888899999999999987777889999998887777652 2 576 7888888887765432
Q ss_pred cccccccccce---eeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCE
Q 018401 153 TDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG-ASA-YARLYDYERIRKVCNKQKAI 222 (356)
Q Consensus 153 ~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~i~~~-----~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~ 222 (356)
...|. .++.+ +.+ +++.+|+++|++++.+. ++++|+++ ++| +|.+.|+++|+++|+++|++
T Consensus 221 ------~~~g~g~~~v~~v--~~~-~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~ 291 (515)
T 2jis_A 221 ------AFLGLGTDSVRVV--KAD-ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLW 291 (515)
T ss_dssp ------HHTTSCGGGEEEE--CBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCE
T ss_pred ------HHcCCCCCcEEEE--ecC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCe
Confidence 22333 45555 454 46789999999999752 37888887 666 89999999999999999999
Q ss_pred EEEeccchhhhcccCCCC---CCCCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 223 MLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 223 vivD~a~~~g~~~~~~~~---~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
+|+|++|+.+..+.+... .++.++|++++++|||+++|.| |+++++++
T Consensus 292 l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~ 343 (515)
T 2jis_A 292 LHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDT 343 (515)
T ss_dssp EEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCC
T ss_pred EEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeCh
Confidence 999999998887654211 1223589999999999999998 99999875
No 101
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.84 E-value=1.7e-20 Score=176.76 Aligned_cols=234 Identities=13% Similarity=0.086 Sum_probs=161.2
Q ss_pred HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHH
Q 018401 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPS 121 (356)
Q Consensus 46 ~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a 121 (356)
++.|+|..++++ ++|.|++++.+.+.... .+|+. .+ .++++++.+++.+.+|. +++++++++|++++
T Consensus 23 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~-------~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a 93 (377)
T 3fdb_A 23 QGVLPLWVAESDFSTCPAVLQAITDAVQREA-FGYQP-------DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRG 93 (377)
T ss_dssp TTSEECCSSCCCSCCCHHHHHHHHHHHHTTC-CSSCC-------SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCeeeecccCCCCCCCHHHHHHHHHHHHcCC-CCCCC-------CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHH
Confidence 457899887774 58999999999887521 12322 22 45776777777777774 67788889999999
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
+..++.+++++||+|+++.++|.++.. .+...|.+++.+ +.+ ++ +|+++|++++++ ++++++++ +
T Consensus 94 ~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~--~~~-~~--~d~~~l~~~l~~-~~~~v~i~~p 159 (377)
T 3fdb_A 94 LYIAIDHFTPAQSKVIVPTPAYPPFFH--------LLSATQREGIFI--DAT-GG--INLHDVEKGFQA-GARSILLCNP 159 (377)
T ss_dssp HHHHHHHHSCTTCCEEEEESCCTHHHH--------HHHHHTCCEEEE--ECT-TS--CCHHHHHHHHHT-TCCEEEEESS
T ss_pred HHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCCEEEEc--cCC-CC--CCHHHHHHHhcc-CCCEEEEeCC
Confidence 998999999999999999977765532 344567666555 454 22 899999999987 78988887 7
Q ss_pred CC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC-----CccEEEeCCCCcCCCC--CceEEEEec
Q 018401 201 SA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-----YADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 201 ~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~-----~~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
+| +|.+.+ +++|.++|++||+++|+|++|+...........++. +.++++.|++|+++.| +.|++++.+
T Consensus 160 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 239 (377)
T 3fdb_A 160 YNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN 239 (377)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC
Confidence 77 887664 667778899999999999999763322101111111 2448899999988322 238777644
Q ss_pred CcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 270 GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
+ ++.+.+... .....++++.+..+++.++++..
T Consensus 240 ~-------------~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~ 272 (377)
T 3fdb_A 240 P-------------SDAEHWQQL-SPVIKDGASTLGLIAAEAAYRYG 272 (377)
T ss_dssp H-------------HHHHHHHHS-CHHHHCCCCHHHHHHHHHHHHHC
T ss_pred H-------------HHHHHHHHH-HHhhcCCCCHHHHHHHHHHHhcc
Confidence 2 444444332 11112567777877777777653
No 102
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.84 E-value=7.9e-21 Score=178.84 Aligned_cols=185 Identities=18% Similarity=0.136 Sum_probs=137.1
Q ss_pred CCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh---c
Q 018401 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL---L 130 (356)
Q Consensus 54 ~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al---~ 130 (356)
+.+++|+.|++++.+.+...+ .++ .. ...++++.+++++|++ ++++++||++++..++.++ +
T Consensus 7 ~~~~~~~~v~~a~~~~~~~~~--~~~-------~~----~~~~l~~~la~~~~~~--~v~~~~ggt~al~~~~~~~~~~~ 71 (375)
T 2fnu_A 7 SEPCLDKEDKKAVLEVLNSKQ--LTQ-------GK----RSLLFEEALCEFLGVK--HALVFNSATSALLTLYRNFSEFS 71 (375)
T ss_dssp CCCCCCHHHHHHHHHHHTSSC--CSS-------SH----HHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHSSCCC
T ss_pred CCCCCCHHHHHHHHHHHHcCc--ccC-------Ch----HHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHhcccC
Confidence 466789999999999886522 111 12 2345668899999987 5677999999999999999 8
Q ss_pred CCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHH
Q 018401 131 KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYE 210 (356)
Q Consensus 131 ~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~ 210 (356)
++||+|+++.++|.++... +...|.+++.+ +.+ +++.+|+++|++++++ ++++|+++.+ +|.+.|++
T Consensus 72 ~~gd~Vl~~~~~~~~~~~~--------~~~~g~~~~~~--~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~-tG~~~~l~ 138 (375)
T 2fnu_A 72 ADRNEIITTPISFVATANM--------LLESGYTPVFA--GIK-NDGNIDELALEKLINE-RTKAIVSVDY-AGKSVEVE 138 (375)
T ss_dssp TTSCEEEECSSSCTHHHHH--------HHHTTCEEEEC--CBC-TTSSBCGGGSGGGCCT-TEEEEEEECG-GGCCCCHH
T ss_pred CCCCEEEECCCccHhHHHH--------HHHCCCEEEEe--ccC-CCCCCCHHHHHhhcCc-CceEEEEeCC-cCCccCHH
Confidence 9999999999888776542 33456555444 555 3347899999998876 7888777643 89999999
Q ss_pred HHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEe
Q 018401 211 RIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFR 268 (356)
Q Consensus 211 ~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~ 268 (356)
+|.++|+++|+++|+|++|+.|..+.+.....+..+++.++|+||++ || | |++++.
T Consensus 139 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~-~~-g~g~~~~~ 195 (375)
T 2fnu_A 139 SVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPI-TT-AEGGAVVT 195 (375)
T ss_dssp HHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSS-CC-SSCEEEEE
T ss_pred HHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCCCc-cc-cCceEEEe
Confidence 99999999999999999999887653310111112566677777987 55 6 777764
No 103
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.84 E-value=1.3e-19 Score=178.09 Aligned_cols=172 Identities=19% Similarity=0.138 Sum_probs=133.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCC--CCccccCCCchHHHHHHHHhhcC--------CC-----C-eeeecCCCCCcccCccc
Q 018401 88 EYIDMAESLCQKRALEAFRLD--PEKWGGSLSGSPSNFQVYTALLK--------PH-----D-RIMALDLPHGGHLSHGY 151 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~--~~~v~v~~sgs~a~~~~l~al~~--------~g-----d-~Vl~~~~~~~~~~~~~~ 151 (356)
....++++++++++++++|++ ++++++++|||+++..++.++.. +| + .|+++..+|.++...+.
T Consensus 128 ~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~ 207 (504)
T 2okj_A 128 PVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGA 207 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHH
Confidence 556788889999999999997 66777899999999888777642 56 6 78888888877654322
Q ss_pred ccccccccccce---eeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc-CCC-CCCcccHHHHHHHHHHcCC
Q 018401 152 QTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG-ASA-YARLYDYERIRKVCNKQKA 221 (356)
Q Consensus 152 ~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~i~~~-----~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~ 221 (356)
..|. +++.+ +.+ +++.+|+++|++++++. +|++|+++ ++| +|.+.|+++|+++|++||+
T Consensus 208 --------~~g~g~~~v~~v--~~~-~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~ 276 (504)
T 2okj_A 208 --------ALGFGTDNVILI--KCN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNL 276 (504)
T ss_dssp --------HTTSCGGGEEEE--CBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTC
T ss_pred --------HcCCCcccEEEE--ecC-CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCC
Confidence 2232 45555 454 46899999999999752 47888888 666 8999999999999999999
Q ss_pred EEEEeccchhhhcccCCC--C-CCCCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 222 IMLADMAHISGLVAAGVI--P-SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 222 ~vivD~a~~~g~~~~~~~--~-~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
++++|++|+.+.....-. . .++.++|++++++|||+++|.+ |+++++++
T Consensus 277 ~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~ 329 (504)
T 2okj_A 277 WLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK 329 (504)
T ss_dssp EEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST
T ss_pred EEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECH
Confidence 999999998877642111 0 1223589999999999998988 99999874
No 104
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.84 E-value=1.3e-20 Score=180.06 Aligned_cols=198 Identities=14% Similarity=0.146 Sum_probs=136.7
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCcccc--CCCchHHHHHHHHhhcCCCCee
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGG--SLSGSPSNFQVYTALLKPHDRI 136 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v--~~sgs~a~~~~l~al~~~gd~V 136 (356)
..+|++++.+........+......|+ ..+ .+++++.+++++|++.. +++ ++||++++..++.++++|||+|
T Consensus 31 ~~~vl~a~~~~~~~~~~~~~~~~~~y~-~~~----~~~Le~~lA~l~g~e~a-lv~p~~~sGt~Ai~~al~all~~GD~V 104 (409)
T 3jzl_A 31 QAKVLDAFQENKVSDFHFHPSTGYGYD-DEG----RDTLERVYATVFKTEAA-LVRPQIISGTHAISTVLFGILRPDDEL 104 (409)
T ss_dssp HHHHHHHHHHTTCCGGGGCCCCTTCTT-CHH----HHHHHHHHHHHHTCSEE-EEETTSCSHHHHHHHHHHHHCCTTCEE
T ss_pred HHHHHHHHHHhhhhhhccCCCcCCCCC-hhH----HHHHHHHHHHHhCCCcE-EEECCCccHHHHHHHHHHHhcCCCCEE
Confidence 367888888764321100111111122 223 34455889999999765 332 7899999998999999999999
Q ss_pred eecC-CCCCcccCccc-cc-ccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcC-----CC-CCCcc
Q 018401 137 MALD-LPHGGHLSHGY-QT-DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA-----SA-YARLY 207 (356)
Q Consensus 137 l~~~-~~~~~~~~~~~-~~-~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~-----~n-~g~~~ 207 (356)
+++. +.|.++....- .. ........|..++.+ +.+ +++.+|++++++++++ ++++|+++. +| +|.+.
T Consensus 105 l~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v--~~~-~~g~~d~e~l~~ai~~-~tklV~i~~s~g~p~nptg~v~ 180 (409)
T 3jzl_A 105 LYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSV--PLL-ENGDVDFPRIAKKMTP-KTKMIGIQRSRGYADRPSFTIE 180 (409)
T ss_dssp EECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEEC--CCC-TTSCCCHHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHH
T ss_pred EEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEe--CCC-CCCCcCHHHHHHhccC-CCeEEEEECCCCCCCCCcCccc
Confidence 9998 77766542110 00 001223346555444 555 4578999999999987 899998863 45 78999
Q ss_pred cHHHHHHHHHH--cCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCC---CCceEEEEec
Q 018401 208 DYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG---PRGAMIFFRK 269 (356)
Q Consensus 208 ~l~~I~~la~~--~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~g---p~gG~l~~~~ 269 (356)
|+++|+++|++ +|+++++|++|+.+......... ++|++++|+||+++| +.||+++.++
T Consensus 181 ~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~---g~Div~~S~sK~lgg~~~~~GG~v~~~~ 244 (409)
T 3jzl_A 181 KIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEV---GADIIAGSLIKNPGGGLAKTGGYIAGKE 244 (409)
T ss_dssp HHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGG---TCSEEEEETTSGGGTTTCSSCEEEEECH
T ss_pred cHHHHHHHHHhhCCCCEEEEeCCcccccccCCcccc---CCeEEEECccccCCccCCceEEEEEeCH
Confidence 99999999999 99999999999876532222222 489999999999976 4579998877
No 105
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.84 E-value=5e-21 Score=180.37 Aligned_cols=191 Identities=17% Similarity=0.166 Sum_probs=140.2
Q ss_pred CeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHh
Q 018401 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTA 128 (356)
Q Consensus 49 i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~a 128 (356)
+++..+.+++++++++++.+.+...+ |....... ++++.+++++|.+ ++++++||++++..++.+
T Consensus 5 ~~~~~~~~~~~~~v~~a~~~~~~~~~---------~~~~~~~~----~l~~~la~~~~~~--~~~~~~sGt~al~~al~~ 69 (367)
T 3nyt_A 5 IDLKNQQARIKDKIDAGIQRVLRHGQ---------YILGPEVT----ELEDRLADFVGAK--YCISCANGTDALQIVQMA 69 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHCC---------CSSCHHHH----HHHHHHHHHHTCS--EEEEESCHHHHHHHHHHH
T ss_pred ccccccccccCHHHHHHHHHHHhcCC---------ccCChHHH----HHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHH
Confidence 45555555667889999988876521 11122333 4558888999987 456799999999989999
Q ss_pred h-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCc
Q 018401 129 L-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARL 206 (356)
Q Consensus 129 l-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g~~ 206 (356)
+ +++||+|+++.++|.++.. .+...|.+++.+ +++++++.+|+++|++++++ ++++|+ ++| +|..
T Consensus 70 ~~~~~gd~Vi~~~~~~~~~~~--------~~~~~G~~~~~~--~~~~~~~~~d~~~l~~~i~~-~~~~v~--~~~~~G~~ 136 (367)
T 3nyt_A 70 LGVGPGDEVITPGFTYVATAE--------TVALLGAKPVYV--DIDPRTYNLDPQLLEAAITP-RTKAII--PVSLYGQC 136 (367)
T ss_dssp TTCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEE--CBCTTTCSBCGGGTGGGCCT-TEEEEC--CBCGGGCC
T ss_pred hCCCCcCEEEECCCccHHHHH--------HHHHcCCEEEEE--ecCCccCCcCHHHHHHhcCc-CCcEEE--eeCCccCh
Confidence 8 8999999999988877654 334557666545 56645578999999999976 788777 445 7999
Q ss_pred ccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC--CCCcCCC-CCceEEEEec
Q 018401 207 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT--THKSLRG-PRGAMIFFRK 269 (356)
Q Consensus 207 ~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s--~~K~l~g-p~gG~l~~~~ 269 (356)
.++++|.++|+++|+++|+|++|+.|....+ ...+.. .|++++| +||++++ +.||+++.++
T Consensus 137 ~~~~~i~~la~~~~~~li~D~a~~~g~~~~~-~~~~~~-~di~~~Sf~~~K~l~~~g~gg~~~~~~ 200 (367)
T 3nyt_A 137 ADFDAINAIASKYGIPVIEDAAQSFGASYKG-KRSCNL-STVACTSFFPSAPLGCYGDGGAIFTND 200 (367)
T ss_dssp CCHHHHHHHHHHTTCCBEEECTTTTTCEETT-EETTSS-SSEEEEECCTTSSSCCSSCCEEEEESC
T ss_pred hhHHHHHHHHHHcCCEEEEECccccCCeECC-eeccCC-CCEEEEECCCCCcCCCcCceeEEEeCC
Confidence 9999999999999999999999998765322 112211 2888888 5899876 4468888765
No 106
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.84 E-value=1.8e-20 Score=180.34 Aligned_cols=240 Identities=14% Similarity=0.057 Sum_probs=159.3
Q ss_pred cCCeeecCCC------CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC-----CCCCccccC
Q 018401 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-----LDPEKWGGS 115 (356)
Q Consensus 47 ~~i~L~~~~~------~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g-----~~~~~v~v~ 115 (356)
+.|+|..+.. ++++.|++++.+.+......+|.. ..+..+++ +.++++++ +++++++++
T Consensus 55 ~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr----~~la~~~~~~~~~~~~~~v~~t 124 (427)
T 3dyd_A 55 TMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAP------SIGFLSSR----EEIASYYHCPEAPLEAKDVILT 124 (427)
T ss_dssp CCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCC------TTCCHHHH----HHHHHHHCBTTBCCCGGGEEEE
T ss_pred CEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCC------CCCcHHHH----HHHHHHHhhcCCCCChHHEEEe
Confidence 4588876553 578999999999887532223322 23344555 66666766 677788889
Q ss_pred CCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 018401 116 LSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 195 (356)
Q Consensus 116 ~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~ 195 (356)
+||++++..++.+++++||+|+++.++|.++.. .+...|.+++.+++... .++.+|++++++++++ ++++
T Consensus 125 ~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~-~~~~ 194 (427)
T 3dyd_A 125 SGCSQAIDLCLAVLANPGQNILVPRPGFSLYKT--------LAESMGIEVKLYNLLPE-KSWEIDLKQLEYLIDE-KTAC 194 (427)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEEEEGG-GTTEECHHHHHSSCCT-TEEE
T ss_pred cCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEecccc-cCCCCCHHHHHHHhcc-CCCE
Confidence 999999998999999999999999976654432 44456766766654322 3467899999999987 7888
Q ss_pred EEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc----CCCCCCCCCccEEEeCCCCcCCCC--CceE
Q 018401 196 IVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSPFEYADVVTTTTHKSLRGP--RGAM 264 (356)
Q Consensus 196 v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~~l~~~D~~~~s~~K~l~gp--~gG~ 264 (356)
|+++ ++| +|...+ +++|+++|+++|+++|+|++|+...... .+....-....+++.|++|.++.| +.|+
T Consensus 195 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~ 274 (427)
T 3dyd_A 195 LIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGW 274 (427)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEE
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEE
Confidence 8887 777 898888 9999999999999999999986532211 111111001236788999976443 2388
Q ss_pred EEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 265 IFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 265 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
++++++.... ..++.+.+..... ...+++.+..+++.++|+.
T Consensus 275 ~~~~~~~~~~-------~~~i~~~l~~~~~--~~~~~~~~~~~a~~~~L~~ 316 (427)
T 3dyd_A 275 ILIHDRRDIF-------GNEIRDGLVKLSQ--RILGPCTIVQGALKSILCR 316 (427)
T ss_dssp EEEECSTTSS-------HHHHHHHHHHHHH--HHCCSCHHHHHHHHHHHHH
T ss_pred EEecCcchhh-------HHHHHHHHHHHHh--ccCCCCHHHHHHHHHHHHh
Confidence 8887531000 0022222221100 1246777888888888874
No 107
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.84 E-value=8.1e-20 Score=178.19 Aligned_cols=202 Identities=11% Similarity=0.096 Sum_probs=144.1
Q ss_pred CeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHh
Q 018401 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTA 128 (356)
Q Consensus 49 i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~a 128 (356)
+.|........|.+.+++.+.+.. + +.|+.. ...++..++++++++++++++|++.. ++++++|++++..++.+
T Consensus 69 ~~lg~~~~~~~p~v~~~~~~~~~~-~-~~~~~~---~~~~g~~~l~~~l~~~la~~~g~~~~-~~~~~ggt~a~~~al~~ 142 (474)
T 1wyu_B 69 YPLGSCTMKYNPKLHEEAARLFAD-L-HPYQDP---RTAQGALRLMWELGEYLKALTGMDAI-TLEPAAGAHGELTGILI 142 (474)
T ss_dssp CCBTTTCCCCCCHHHHHHHHTTSS-C-CTTSCG---GGCHHHHHHHHHHHHHHHHHHTCSEE-ECCCSSHHHHHHHHHHH
T ss_pred cccccccccCCHHHHHHHHHHHHh-c-CCCCch---hhChHHHHHHHHHHHHHHHHHCCCce-eecChHHHHHHHHHHHH
Confidence 555522233457777777765322 1 111110 01355678888999999999999763 44588999888765554
Q ss_pred h----cCCCC-----eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 018401 129 L----LKPHD-----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 199 (356)
Q Consensus 129 l----~~~gd-----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~ 199 (356)
+ .++|| +|+++.+.|+++.. .+...|.+++.+ +.+ +++.+|+++|++++++ ++++|+++
T Consensus 143 ~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~--------~~~~~G~~vv~v--~~~-~~~~~d~~~L~~~i~~-~t~~v~~~ 210 (474)
T 1wyu_B 143 IRAYHEDRGEGRTRRVVLVPDSAHGSNPA--------TASMAGYQVREI--PSG-PEGEVDLEALKRELGP-HVAALMLT 210 (474)
T ss_dssp HHHHHHHTTCTTTCCEEEEETTSCTHHHH--------HHHHTTCEEEEE--CBC-TTSSBCHHHHHHHCST-TEEEEEEC
T ss_pred HHHHHHhcCCccCCCEEEEeCCcChhhHH--------HHHHCCCEEEEe--cCC-CCCCcCHHHHHHhhCC-CceEEEEE
Confidence 4 46888 99999988877653 244567666666 454 4578999999999987 78999998
Q ss_pred CCC-CCCc-ccHHHHHHHHHHcCCEEEEeccchhhhcc-cCCCCCCCCCccEEEeCCCCcCCCCC-----c-eEEEEecC
Q 018401 200 ASA-YARL-YDYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPFEYADVVTTTTHKSLRGPR-----G-AMIFFRKG 270 (356)
Q Consensus 200 ~~n-~g~~-~~l~~I~~la~~~g~~vivD~a~~~g~~~-~~~~~~~l~~~D~~~~s~~K~l~gp~-----g-G~l~~~~~ 270 (356)
.+| +|.+ .++++|+++|+++|+++|+|++|+.+... ...... ++|++++|+||+|++|. + |+++++++
T Consensus 211 ~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~---g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~ 287 (474)
T 1wyu_B 211 NPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDM---GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH 287 (474)
T ss_dssp SSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHH---TCSEEECCTTTTTCCCCTTSCCCCCCEEECGG
T ss_pred CCCCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccC---CCcEEEEeCccccccCCCCCCCCeEEEEEcHH
Confidence 445 8877 69999999999999999999999766542 111111 48999999999998773 4 89999886
Q ss_pred c
Q 018401 271 V 271 (356)
Q Consensus 271 ~ 271 (356)
+
T Consensus 288 l 288 (474)
T 1wyu_B 288 L 288 (474)
T ss_dssp G
T ss_pred H
Confidence 4
No 108
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.83 E-value=8e-20 Score=172.86 Aligned_cols=217 Identities=18% Similarity=0.168 Sum_probs=152.0
Q ss_pred cCCeeecC--CCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchHHHH
Q 018401 47 KGLELIPS--ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~--~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~a~~ 123 (356)
..+++..+ ..++++.|++++. . + +. ...+++++++.+++++|++ ++++++++||++++.
T Consensus 29 ~v~~~~~~~~~~~~~~~v~~a~~----~-~--~~-----------~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~ 90 (374)
T 2aeu_A 29 ALYDLSGLSGGFLIDEKDKALLN----T-Y--IG-----------SSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAIL 90 (374)
T ss_dssp GCEECSSCCCCCCCCHHHHHHHT----S-T--TH-----------HHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred ceeeecccCCCCCCCHHHHHHHH----H-h--cC-----------chHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHH
Confidence 45676654 4578999999986 1 2 10 1234566778888999984 456777999999999
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE-EEEc-CC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL-IVAG-AS 201 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~-v~l~-~~ 201 (356)
.++.++ |||+|+++.++|+++..... .+...|.+++.+ .|+++++++ ++ ++++ |+++ ++
T Consensus 91 ~~~~~~--~gd~Vl~~~~~y~~~~~~~~-----~~~~~g~~~~~v----------~d~~~l~~~-~~-~~~~~v~~~~p~ 151 (374)
T 2aeu_A 91 ATILAL--KPKKVIHYLPELPGHPSIER-----SCKIVNAKYFES----------DKVGEILNK-ID-KDTLVIITGSTM 151 (374)
T ss_dssp HHHHHH--CCSEEEEECSSSSCCTHHHH-----HHHHTTCEEEEE----------SCHHHHHTT-CC-TTEEEEEECBCT
T ss_pred HHHHhC--CCCEEEEecCCCCccHHHHH-----HHHHcCcEEEEe----------CCHHHHHhc-CC-CccEEEEEccCC
Confidence 888877 99999999988876643211 233446544333 278999887 54 8999 8887 77
Q ss_pred C-CC-CcccHHHHHHHHHHcCCEEEEeccchhhhc-ccCCCCCCCC-CccEEEeCCCCcCCCCCceEEEEecCcchhccC
Q 018401 202 A-YA-RLYDYERIRKVCNKQKAIMLADMAHISGLV-AAGVIPSPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQ 277 (356)
Q Consensus 202 n-~g-~~~~l~~I~~la~~~g~~vivD~a~~~g~~-~~~~~~~~l~-~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~ 277 (356)
| +| ...++++|.++|++||+++|+|++|+.+.. +.. ...++. ++|++++|+||+++|+++|+++.++
T Consensus 152 nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~di~~~S~sK~l~g~~~G~~~~~~-------- 222 (374)
T 2aeu_A 152 DLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFN-QPPALKLGADLVVTSTDKLMEGPRGGLLAGKK-------- 222 (374)
T ss_dssp TSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTT-CCCHHHHTCSEEEEETTSSSSSCSCEEEEEEH--------
T ss_pred CCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccc-cCCccccCCcEEEecCcccccCcceEEEEECH--------
Confidence 7 77 888999999999999999999999977642 111 100111 3799999999999888779999887
Q ss_pred CcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 278 GKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
++.+.+..... ...++++.+..+++.++++.+
T Consensus 223 ------~~~~~l~~~~~-~~~~~~~~~~~~a~~~al~~~ 254 (374)
T 2aeu_A 223 ------ELVDKIYIEGT-KFGLEAQPPLLAGIYRALKNF 254 (374)
T ss_dssp ------HHHHHHHHHHH-TTTCBCCHHHHHHHHHHHHHC
T ss_pred ------HHHHHHHHhhc-cccCCCCHHHHHHHHHHHHHH
Confidence 44444433211 112356677777777888765
No 109
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.83 E-value=4.2e-21 Score=181.12 Aligned_cols=192 Identities=13% Similarity=0.106 Sum_probs=140.8
Q ss_pred CeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHh
Q 018401 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTA 128 (356)
Q Consensus 49 i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~a 128 (356)
+++..+.+.+++.+++++.+.+...+ |...... .++++.+++++|.+ ++++++||++++..++.+
T Consensus 6 ~~l~~~~~~~~~~~~~a~~~~~~~~~---------~~~~~~~----~~l~~~la~~~~~~--~~i~~~sgt~al~~~l~~ 70 (373)
T 3frk_A 6 ASFKPMHDEIEYEIKFKFEEIYKRNW---------FILGDED----KKFEQEFADYCNVN--YCIGCGNGLDALHLILKG 70 (373)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTC---------CSSSHHH----HHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHH
T ss_pred cCCCcccCCCCHHHHHHHHHHHHCCC---------ccCCchH----HHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHH
Confidence 34443444457888888888776521 1112233 34558888999986 466799999999989999
Q ss_pred h-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCc
Q 018401 129 L-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARL 206 (356)
Q Consensus 129 l-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g~~ 206 (356)
+ +++||+|+++.++|.++.. .+...|.+++.+ +.+++++.+|+++|++++++ ++++|++ +| +|..
T Consensus 71 l~~~~gd~Vi~~~~~~~~~~~--------~~~~~g~~~~~~--~~~~~~~~~d~~~l~~~l~~-~~~~v~~--~n~~G~~ 137 (373)
T 3frk_A 71 YDIGFGDEVIVPSNTFIATAL--------AVSYTGAKPIFV--EPDIRTYNIDPSLIESAITE-KTKAIIA--VHLYGQP 137 (373)
T ss_dssp TTCCTTCEEEEETTSCTHHHH--------HHHHHSCEEEEE--CEETTTTEECGGGTGGGCCT-TEEEEEE--ECCTTCC
T ss_pred cCCCCcCEEEECCCCcHHHHH--------HHHHcCCEEEEE--eccccccCcCHHHHHHhcCC-CCeEEEE--ECCCcCc
Confidence 9 9999999999988887654 334557666555 55545678899999999987 7888874 44 8999
Q ss_pred ccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC--CCCcCCC-CCceEEEEecC
Q 018401 207 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT--THKSLRG-PRGAMIFFRKG 270 (356)
Q Consensus 207 ~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s--~~K~l~g-p~gG~l~~~~~ 270 (356)
.|+++|.++|+++|+++|+|++|+.|.. .+....+ ...|++++| .||++++ +.||+++.+++
T Consensus 138 ~~l~~i~~l~~~~~~~li~D~a~~~g~~-~~~~~~~-~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~ 202 (373)
T 3frk_A 138 ADMDEIKRIAKKYNLKLIEDAAQAHGSL-YKGMKVG-SLGDAAGFSFYPAKNLGSLGDGGAVVTNDK 202 (373)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTCTTCE-ETTEETT-SSSSEEEEECCTTSSSCCSSSCEEEEESCH
T ss_pred ccHHHHHHHHHHcCCEEEEECCcccCCE-ECCEecc-ccccEEEEeCcCCCccCccceeEEEEeCCH
Confidence 9999999999999999999999998766 2222211 125888888 6699977 55688887653
No 110
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.83 E-value=3.5e-20 Score=176.59 Aligned_cols=193 Identities=16% Similarity=0.093 Sum_probs=142.2
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVY 126 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l 126 (356)
..++|..++++.++.+++++.+.+... .| ...... .++++.+++++|.+ +++++++|++++..++
T Consensus 31 ~~id~~~~~~~~~~~v~~a~~~~~~~~---~y------~~~~~~----~~l~~~la~~~~~~--~~v~~~~Gt~a~~~~l 95 (399)
T 2oga_A 31 PFLDLKAAYEELRAETDAAIARVLDSG---RY------LLGPEL----EGFEAEFAAYCETD--HAVGVNSGMDALQLAL 95 (399)
T ss_dssp CSCCHHHHHHHTHHHHHHHHHHHHHHT---CC------SSSHHH----HHHHHHHHHHTTSS--EEEEESCHHHHHHHHH
T ss_pred cccccCcCCCCCCHHHHHHHHHHHhcC---CC------CCchhH----HHHHHHHHHHHCCC--eEEEecCHHHHHHHHH
Confidence 567888777777799999999887641 11 111223 34568889999986 4566888899999899
Q ss_pred Hhh-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CC
Q 018401 127 TAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YA 204 (356)
Q Consensus 127 ~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g 204 (356)
.++ +++||+|+++.++|.++.. .+...|.+++.+ +.+++++.+|+++|++++++ ++++|++ +| +|
T Consensus 96 ~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~--~~~~~~~~~d~~~l~~~i~~-~~~~v~~--~n~tG 162 (399)
T 2oga_A 96 RGLGIGPGDEVIVPSHTYIASWL--------AVSATGATPVPV--EPHEDHPTLDPLLVEKAITP-RTRALLP--VHLYG 162 (399)
T ss_dssp HHTTCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEE--CBCSSSSSBCHHHHHHHCCT-TEEEECC--BCGGG
T ss_pred HHhCCCCcCEEEECCCccHHHHH--------HHHHCCCEEEEE--ecCCCCCCcCHHHHHHhcCC-CCeEEEE--eCCcC
Confidence 998 8999999999988766543 334556666555 45533568999999999986 7887775 34 89
Q ss_pred CcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC--CCcCCCC-CceEEEEec
Q 018401 205 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT--HKSLRGP-RGAMIFFRK 269 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~--~K~l~gp-~gG~l~~~~ 269 (356)
...|+++|.++|+++|+++|+|++|+.|... +....+ ...|++++|+ +|+++++ +||++++++
T Consensus 163 ~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~~~-~~~di~~~S~~~sK~~~~~G~~g~~~~~~ 228 (399)
T 2oga_A 163 HPADMDALRELADRHGLHIVEDAAQAHGARY-RGRRIG-AGSSVAAFSFYPGKNLGCFGDGGAVVTGD 228 (399)
T ss_dssp CCCCHHHHHHHHHHHTCEECEECTTCTTCEE-TTEETT-CTTCEEEEECCTTSSSCCSSCCEEEEESC
T ss_pred CccCHHHHHHHHHHcCCEEEEECcccccCcc-CCeecc-cccCEEEEeCCCCccCCcCCceEEEEeCC
Confidence 8899999999999999999999999877543 211111 1258999998 4988653 568888763
No 111
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.83 E-value=1.6e-21 Score=187.47 Aligned_cols=260 Identities=15% Similarity=0.058 Sum_probs=166.4
Q ss_pred hcccccccChHHHHHHHHHHHHHHcCCeeecCCC----CCcHHHHHHHHhhhhccC--CCCCCCCccCCCchhHHHHHHH
Q 018401 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSEN----FTSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDMAESL 96 (356)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~----~~~~~V~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~~ 96 (356)
++++...+.+..+..+.+. ...++.|+|..+.+ .+++.+.+++.+.+.... ..+|+ ...+..+++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~-~~~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~------~~~g~~~lr~~ 93 (425)
T 1vp4_A 21 ISKIGQNMKSSIIREILKF-AADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYS------TTEGDPVLKQQ 93 (425)
T ss_dssp CCHHHHTCCCCCHHHHTTT-TTSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCC------CTTCCHHHHHH
T ss_pred hhhhhhcCCCcHHHHHHHh-ccCCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCC------CCCCCHHHHHH
Confidence 3444444444433333332 12346788876543 256889999988876410 01222 22345678877
Q ss_pred HHHHHHHHcC---CCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 97 CQKRALEAFR---LDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 97 ~~~~la~~~g---~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
+.+++.+.+| ++++++++++|+++++..++.+++++||+|+++.+.|.++.. .+...|.++..++ .+
T Consensus 94 la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~ 163 (425)
T 1vp4_A 94 ILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAIN--------AFRQYLANFVVVP--LE 163 (425)
T ss_dssp HHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTTCEEEEEE--EE
T ss_pred HHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCCEEEEec--cC
Confidence 7777777768 667788789999999998999999999999999976655432 3445676665554 44
Q ss_pred CCCCCCCHHHHHHHhhh-------cCCcEEE-Ec-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC---
Q 018401 174 ESTGYIDYDQLEKSATL-------FRPKLIV-AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG--- 237 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~~-------~~~k~v~-l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~--- 237 (356)
++ .+|+++|++++++ .++++|+ ++ ++| +|.+.+ +++|.++|+++|+++|+|++|+.......
T Consensus 164 -~~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~ 241 (425)
T 1vp4_A 164 -DD-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVD 241 (425)
T ss_dssp -TT-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCC
T ss_pred -CC-CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCc
Confidence 22 3899999998875 2688874 55 667 887765 66888999999999999999976432111
Q ss_pred -CCCCCCCCccEEEeCCCCcCC-CCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 238 -VIPSPFEYADVVTTTTHKSLR-GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 238 -~~~~~l~~~D~~~~s~~K~l~-gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
+......+.++++.|++|+++ |.+.|++++++ ++.+.+....... ..+.+.+..+++.++|+.
T Consensus 242 ~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~--------------~~~~~l~~~~~~~-~~~~~~~~~~a~~~~l~~ 306 (425)
T 1vp4_A 242 PIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSK--------------EFIRKIVQAKQSA-DLCSPAITHRLAARYLER 306 (425)
T ss_dssp CHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCH--------------HHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHH
T ss_pred CHHHhCCCCCEEEEeccccccccccceEEEeeCH--------------HHHHHHHHHhhhh-cCCCCHHHHHHHHHHHhc
Confidence 100000135788999999886 11238998876 4444333211111 124466677777777765
Q ss_pred H
Q 018401 316 V 316 (356)
Q Consensus 316 ~ 316 (356)
.
T Consensus 307 ~ 307 (425)
T 1vp4_A 307 Y 307 (425)
T ss_dssp S
T ss_pred C
Confidence 3
No 112
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.83 E-value=3.3e-20 Score=173.22 Aligned_cols=201 Identities=16% Similarity=0.151 Sum_probs=139.9
Q ss_pred cCCeeecCCC-CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHH
Q 018401 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 47 ~~i~L~~~~~-~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~ 125 (356)
..|+|..+.. +++|.|++++.+.+.. +. ..|+. ..+.+++++++++++| .+.++++++||++++..+
T Consensus 8 ~~id~~~~~~~~~~~~v~~a~~~~~~~-~~------~~~~~----~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~a 75 (356)
T 1v72_A 8 PALGFSSDNIAGASPEVAQALVKHSSG-QA------GPYGT----DELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALC 75 (356)
T ss_dssp CCCBCSCGGGCCCCHHHHHHHHHTTSS-CC------CSTTC----SHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHH
T ss_pred ceEeeccCCccCCCHHHHHHHHhhccC-cc------ccccc----chHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHH
Confidence 4567764432 4689999999887532 11 11221 2445667799999999 444467799999999989
Q ss_pred HHhhcCCCCeeeecCCCCCcccCccccccccccccc--ceeeEEEecccCCCCCCCCHHHHHH-Hhhhc------CCcEE
Q 018401 126 YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLNESTGYIDYDQLEK-SATLF------RPKLI 196 (356)
Q Consensus 126 l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~~~~d~~~l~~-~i~~~------~~k~v 196 (356)
+.++++|||+|+++.+.|.+..... .+... |.+++.+ +.+ ++.+|+++|++ ++++. ++++|
T Consensus 76 l~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~~g~~~~~v--~~~--~~~~d~~~l~~~~i~~~~~~~~~~~~~v 145 (356)
T 1v72_A 76 LSAMTPPWGNIYCHPASHINNDECG------APEFFSNGAKLMTV--DGP--AAKLDIVRLRERTREKVGDVHTTQPACV 145 (356)
T ss_dssp HHTSCCTTEEEEECTTSHHHHSSTT------HHHHHTTSCEEEEC--CCG--GGCCCHHHHHHHTTSSTTCTTSCEEEEE
T ss_pred HHHhcCCCCEEEEcCccchhhhhch------HHHHHhCCcEEEEe--cCC--CCeEcHHHHHHHhhhcchhhccCCceEE
Confidence 9999999999999997776554320 12333 6555444 443 36789999999 88641 57888
Q ss_pred EEc-CCCCCC---cccHHHHHHHHHHcCCEEEEeccchhhhc---ccCCCCCCC-CCccEEEeCCCCcCCCCCc-eEEEE
Q 018401 197 VAG-ASAYAR---LYDYERIRKVCNKQKAIMLADMAHISGLV---AAGVIPSPF-EYADVVTTTTHKSLRGPRG-AMIFF 267 (356)
Q Consensus 197 ~l~-~~n~g~---~~~l~~I~~la~~~g~~vivD~a~~~g~~---~~~~~~~~l-~~~D~~~~s~~K~l~gp~g-G~l~~ 267 (356)
+++ ++|+|. ..++++|.++|++||+++|+|++|..+.. ........+ .++|++++|+||+ ++|.| |+++.
T Consensus 146 ~~~~~~~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~ 224 (356)
T 1v72_A 146 SITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLF 224 (356)
T ss_dssp EEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEES
T ss_pred EEEcCCCCCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEE
Confidence 888 556887 55688999999999999999999975422 111111111 1489999999998 67888 78877
Q ss_pred ecC
Q 018401 268 RKG 270 (356)
Q Consensus 268 ~~~ 270 (356)
+++
T Consensus 225 ~~~ 227 (356)
T 1v72_A 225 NTS 227 (356)
T ss_dssp SGG
T ss_pred CHH
Confidence 663
No 113
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.83 E-value=2.2e-20 Score=180.96 Aligned_cols=233 Identities=9% Similarity=-0.014 Sum_probs=159.3
Q ss_pred chhhhcccccccChHHHHHHHHHHHHHHcCCeeecCCC----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHH
Q 018401 19 WPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSEN----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 94 (356)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 94 (356)
|...++++.....+..+..+.+. ...++.|+|..+.+ ++++.+.+++.+.+..... ....|+...+..+++
T Consensus 50 ~~~~~s~~~~~~~~s~~~~~~~~-~~~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~----~~~~Y~~~~g~~~lr 124 (448)
T 3aow_A 50 VERFFSKKALEMRASEVRELLKL-VETSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYAD----KALQYGTTKGFTPLR 124 (448)
T ss_dssp GGGGCCHHHHHCCCCHHHHHHHH-HHTSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHH----HHHSCCCTTCCHHHH
T ss_pred hHHHhhHHHhcCCCcHHHHHHHh-ccCCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhH----HHhCCCCCCCcHHHH
Confidence 66566666666666665555543 22456788876553 2567899998887764100 001122224456788
Q ss_pred HHHHHHHHHHcCC-CCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 95 SLCQKRALEAFRL-DPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 95 ~~~~~~la~~~g~-~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
+++.+++.+.+|+ +++++++++|+++++..++.+++++||+|++..++|.++.. .+...|.++..+ +.+
T Consensus 125 ~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v--~~~ 194 (448)
T 3aow_A 125 ETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQ--------AFNFYEPQYIQI--PLD 194 (448)
T ss_dssp HHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTCCEEEEE--EEE
T ss_pred HHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCCEEEEe--ccC
Confidence 7777777777798 67788889999999998999999999999999977655432 344556666555 444
Q ss_pred CCCCCCCHHHHHHHhh----h-cCCcEEE-Ec-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC----C
Q 018401 174 ESTGYIDYDQLEKSAT----L-FRPKLIV-AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG----V 238 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~----~-~~~k~v~-l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~----~ 238 (356)
++ .+|+++|+++++ + .++++|+ ++ ++| +|.+.+ +++|.++|++||+++|+|++|+....... +
T Consensus 195 -~~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~ 272 (448)
T 3aow_A 195 -DE-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKI 272 (448)
T ss_dssp -TT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCT
T ss_pred -CC-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCH
Confidence 22 389999999987 3 2688875 44 667 887776 56899999999999999999976543211 1
Q ss_pred CCCCCCCccEEEeCCCCcCCCCC--ceEEEEec
Q 018401 239 IPSPFEYADVVTTTTHKSLRGPR--GAMIFFRK 269 (356)
Q Consensus 239 ~~~~l~~~D~~~~s~~K~l~gp~--gG~l~~~~ 269 (356)
......+.++++.|++|+++ |. .|++++++
T Consensus 273 ~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~ 304 (448)
T 3aow_A 273 KALDNEGRVIYLGTFSKILA-PGFRIGWMVGDP 304 (448)
T ss_dssp GGGCTTSCEEEEEESTTTTC-GGGCCEEEEECH
T ss_pred HhcCCCCCEEEEccchhhcc-ccccEEEEEeCH
Confidence 11111135788999999885 42 39999886
No 114
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.83 E-value=1.7e-19 Score=171.25 Aligned_cols=192 Identities=17% Similarity=0.176 Sum_probs=139.2
Q ss_pred CeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHh
Q 018401 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTA 128 (356)
Q Consensus 49 i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~a 128 (356)
+++..+...+++++++++.+.+...+ + ...... .++++.+++++|++ +.+++++|++++..++.+
T Consensus 4 ~~~~~~~~~~~~~~~~a~~~~~~~~~--------~-~~~~~~----~~l~~~la~~~~~~--~~i~~~sGt~a~~~al~~ 68 (390)
T 3b8x_A 4 INYPLASSTWDDLEYKAIQSVLDSKM--------F-TMGEYV----KQYETQFAKTFGSK--YAVMVSSGSTANLLMIAA 68 (390)
T ss_dssp -CBCSCCCCCCHHHHHHHHHHHHHTC--------C-SSCHHH----HHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHH
T ss_pred eeccCCCCCCCHHHHHHHHHHHHcCC--------C-CCChHH----HHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHH
Confidence 44545667789999999999886521 1 112233 34558888999986 356688888899989998
Q ss_pred h-------cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 018401 129 L-------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 201 (356)
Q Consensus 129 l-------~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~ 201 (356)
+ +++||+|+++.++|.++..+ +...|.+++.+ +++++++.+|+++|++++++ ++++|+++ +
T Consensus 69 ~~~~~~~~~~~g~~Vi~~~~~~~~~~~~--------~~~~g~~~~~~--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~-~ 136 (390)
T 3b8x_A 69 LFFTKKPRLKKGDEIIVPAVSWSTTYYP--------LQQYGLRVKFV--DIDINTLNIDIESLKEAVTD-STKAILTV-N 136 (390)
T ss_dssp TTSSSSCSCCTTCEEEEESSSCHHHHHH--------HHHTTCEEEEE--CBCTTTCSBCHHHHHHHCCT-TEEEEEEE-C
T ss_pred HHhhhhcCCCCcCEEEECCCCcHHHHHH--------HHHcCCEEEEE--ecCccccCcCHHHHHHHhCc-CCeEEEEE-C
Confidence 8 88999999999888777553 33456556555 55544578999999999987 78988886 2
Q ss_pred CCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC--CCCcCCCCCceEEEEec
Q 018401 202 AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT--THKSLRGPRGAMIFFRK 269 (356)
Q Consensus 202 n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s--~~K~l~gp~gG~l~~~~ 269 (356)
.+|...++++|.++|+++|+++|+|++|+.|..+ +....+. ..|+.++| ++|.+.++.||++++++
T Consensus 137 ~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~g~-~~~~~~~s~~~~k~~~~g~gG~~~~~~ 204 (390)
T 3b8x_A 137 LLGNPNNFDEINKIIGGRDIILLEDNCESMGATF-NNKCAGT-FGLMGTFSSFYSNHIATMEGGCIVTDD 204 (390)
T ss_dssp GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEE-TTEETTS-SSSEEEEECCTTSSSCSSSCEEEEESC
T ss_pred CccChhhHHHHHHHHHHcCCEEEEECcCcccCEE-CCccccc-ccceEEEEccCCCCCccCCceEEEeCC
Confidence 3677789999999999999999999999988765 3322221 13555433 34547667788888876
No 115
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.83 E-value=2.3e-20 Score=179.68 Aligned_cols=198 Identities=13% Similarity=0.140 Sum_probs=137.6
Q ss_pred cHHHHHHHHhhhhcc-CCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccc-cCCCchHHHHHHHHhhcCCCCee
Q 018401 59 SVSVMQAVGSVMTNK-YSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG-GSLSGSPSNFQVYTALLKPHDRI 136 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~-v~~sgs~a~~~~l~al~~~gd~V 136 (356)
.+.|++++.+..... ......+. .| .+..++++++++++++|++...+. +.+||++++..++.++++|||+|
T Consensus 37 ~~~vl~A~~~~~~~~~~~~~~~g~-~y-----~~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~V 110 (431)
T 3ht4_A 37 QFRVLESFGKHKISDSHFIPTTGY-GY-----DDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDEL 110 (431)
T ss_dssp HHHHHHHHHHTTCCGGGSCCCCTT-CC-----SCHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEE
T ss_pred HHHHHHHHHHhchhhhhcCCCCCC-CC-----ChhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEE
Confidence 568888887753221 11111111 11 123356677999999999765322 24588999998999999999999
Q ss_pred eecC-CCCCcccCccccc--ccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc--CC---C-CCCcc
Q 018401 137 MALD-LPHGGHLSHGYQT--DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--AS---A-YARLY 207 (356)
Q Consensus 137 l~~~-~~~~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~--~~---n-~g~~~ 207 (356)
+++. +.|+++....... ++......|.+++.+ +.+ +++.+|+++|++++++ ++++|+++ ++ + ++...
T Consensus 111 l~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v--~~~-~~~~~d~e~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~ 186 (431)
T 3ht4_A 111 LYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAV--PLT-EGGLVDFEAVAAAIHS-NTKMIGIQRSKGYATRPSFTIS 186 (431)
T ss_dssp EECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEEC--CBC-TTSSBCHHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHH
T ss_pred EEeCCCCchhHHHHHhhcccccchHHHcCCEEEEe--CCC-CCCCcCHHHHHhhcCC-CCeEEEEECCCCCCCCCcCCHH
Confidence 9998 7887654321100 011233456556444 555 4578999999999987 89999986 22 2 45778
Q ss_pred cHHHHHHHHHH--cCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCC---CCceEEEEec
Q 018401 208 DYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG---PRGAMIFFRK 269 (356)
Q Consensus 208 ~l~~I~~la~~--~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~g---p~gG~l~~~~ 269 (356)
++++|+++|++ +|+++++|++|+.+......... ++|++++|+||+|+| |.||+++.++
T Consensus 187 ~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~~---g~Di~~~S~sK~lgg~~~~~GG~v~~~~ 250 (431)
T 3ht4_A 187 QIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHV---GADLMAGSLIKNPGGGIVKTGGYIVGKE 250 (431)
T ss_dssp HHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGGT---TCSEEEEETTSGGGTTTCSSCEEEEECH
T ss_pred HHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcccc---CCeEEEcCccccCCCCCCCceEEEEecH
Confidence 89999999999 99999999999877543322223 389999999999866 7789999887
No 116
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.83 E-value=4.1e-21 Score=185.95 Aligned_cols=198 Identities=16% Similarity=0.104 Sum_probs=136.7
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
+++++++++ +|++ +++++++|+++++.+++++++++||+|+++.++|.++.. .+...|+.++.++...+.
T Consensus 60 ~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~--------~~~~~G~~~~~v~~~~~~ 129 (446)
T 2x3l_A 60 LKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLH--------ALDISQQEGHFIETHQSP 129 (446)
T ss_dssp HHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHH--------HHHHHTCCEEECEEEECT
T ss_pred HHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHH--------HHHHcCCeEEEEeCeecc
Confidence 456699999 9987 456668899999999999999999999999988877654 333456666555432242
Q ss_pred CC---CCCCHHHHHHHhhhcCCcEEEEcCCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCC-C-CccE
Q 018401 175 ST---GYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-E-YADV 248 (356)
Q Consensus 175 ~~---~~~d~~~l~~~i~~~~~k~v~l~~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l-~-~~D~ 248 (356)
+. +.+|+++| +.+ ++++|+++.+| +|.+.|+++|.++|++||+++|+|++|+. .....-.+... . ++|+
T Consensus 130 ~~~~~~~~d~~~l---~~~-~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~~~~~~~~g~Di 204 (446)
T 2x3l_A 130 LTNHYNKVNLSRL---NND-GHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGFPDSTLNYQADY 204 (446)
T ss_dssp TTSSEEEEEC-----------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTSCCCGGGGTCSE
T ss_pred ccCcCCCCCHHHH---cCC-CceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCCCCChHHcCCCE
Confidence 11 45777877 344 78999888444 89999999999999999999999999976 33111001111 1 4899
Q ss_pred EEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 249 VTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 249 ~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+++|+||+++|+.| |+++++++.. + ...+.........+++++..++++.++++++.+.
T Consensus 205 ~~~S~~K~l~~~~g~g~l~~~~~~i-----------~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~ 264 (446)
T 2x3l_A 205 VVQSFHKTLPALTMGSVLYIHKNAP-----------Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTY 264 (446)
T ss_dssp EEECHHHHSSSCTTCEEEEEETTCT-----------T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHC
T ss_pred EEECCccccccccccEEEEEcCCcC-----------C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHh
Confidence 99999999988877 9999987521 1 1111111001124688899999999999888753
No 117
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.82 E-value=2.9e-20 Score=177.85 Aligned_cols=241 Identities=15% Similarity=0.131 Sum_probs=158.2
Q ss_pred cCCeeecCC------CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHH------cC--CCCCcc
Q 018401 47 KGLELIPSE------NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA------FR--LDPEKW 112 (356)
Q Consensus 47 ~~i~L~~~~------~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~------~g--~~~~~v 112 (356)
+.|+|..+. .++++.+++++.+.+......+| +...+..++++++.+++.+. .| ++++++
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v 107 (416)
T 1bw0_A 34 PIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGY------FPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNV 107 (416)
T ss_dssp CCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSC------CCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGE
T ss_pred CeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCc------CCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceE
Confidence 467887654 35689999999998865211223 22234566776666666521 22 567788
Q ss_pred ccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcC
Q 018401 113 GGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR 192 (356)
Q Consensus 113 ~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~ 192 (356)
++++|+++++..++.+++++||+|+++.++|.++.. .+...|..++.++++.+ .++.+|+++|++++++ +
T Consensus 108 ~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~-~ 177 (416)
T 1bw0_A 108 VLCSGGSHGILMAITAICDAGDYALVPQPGFPHYET--------VCKAYGIGMHFYNCRPE-NDWEADLDEIRRLKDD-K 177 (416)
T ss_dssp EEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEEEEGG-GTTEECHHHHHHHCCT-T
T ss_pred EEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHH--------HHHHcCcEEEEeecCcc-cCCCCCHHHHHHHhcc-C
Confidence 889999999998999999999999999987765532 34455766655643221 2356899999999986 7
Q ss_pred CcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC-----CCC-CCCC--CccEEEeCCCCcCCC
Q 018401 193 PKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-----VIP-SPFE--YADVVTTTTHKSLRG 259 (356)
Q Consensus 193 ~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~-----~~~-~~l~--~~D~~~~s~~K~l~g 259 (356)
+++++++ ++| +|.+.| +++|.++|++||+++|+|++|+....... ... ..+. ..++++.|++|+++.
T Consensus 178 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 257 (416)
T 1bw0_A 178 TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVV 257 (416)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSC
T ss_pred CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCC
Confidence 8888777 777 898887 88999999999999999999975322111 100 1111 135788899998754
Q ss_pred C--CceEEEEecC--cchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 260 P--RGAMIFFRKG--VKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 260 p--~gG~l~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
| +.|+++++++ +.. .+...+... ....++++.+..+++.++|+.
T Consensus 258 ~Glr~G~~~~~~~~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~ 305 (416)
T 1bw0_A 258 PGWRLGWLLYVDPHGNGP----------SFLEGLKRV--GMLVCGPCTVVQAALGEALLN 305 (416)
T ss_dssp GGGCCEEEEEECTTCSCH----------HHHHHHHHH--HHHHTCSCHHHHHHHHHHHHS
T ss_pred CCceEEEEEeeCchhhHH----------HHHHHHHHH--hccccCCCcHHHHHHHHHHhc
Confidence 3 3488888763 210 121111110 001235677777888787764
No 118
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.82 E-value=4.1e-21 Score=182.72 Aligned_cols=226 Identities=14% Similarity=0.069 Sum_probs=149.7
Q ss_pred hhhhcccccccChHHHHHHHHHHHHHHcCCeeecCCC----CCcHHHHHHHHhhhhccC--CCCCCCCccCCCchhHHHH
Q 018401 20 PKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSEN----FTSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDMA 93 (356)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~----~~~~~V~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~l 93 (356)
..+++++...+.+..+..+.... ..++.|+|..+.. .+++.+.+++.+.+.... ..+|+.. .+..++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~------~~~~~l 79 (397)
T 2zyj_A 7 SEAFGKGAGRIQASTIRELLKLT-QRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPT------EGYAPL 79 (397)
T ss_dssp HHHSCGGGGGCCCCHHHHHHHHH-TSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCT------TCCHHH
T ss_pred HHHhhhhhcccCchHHHHHHhhc-cCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCC------CCCHHH
Confidence 33455666666555544444322 2346788875543 156789999988775410 1123221 223444
Q ss_pred HHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 94 ESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 94 ~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
+ +.+++++|++++++++++|+++++..++.+++++||+|++..+.|.++.. .+...|.++..++ .+
T Consensus 80 ~----~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~~ 145 (397)
T 2zyj_A 80 R----AFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQ--------AFRLQGPRFLTVP--AG 145 (397)
T ss_dssp H----HHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTCCEEEEEE--EE
T ss_pred H----HHHHHHhCCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCCEEEecC--cC
Confidence 4 77777778888888889999999998999999999999999977655432 3444566665554 44
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEE-Ec-CCC-CCCcccH---HHHHHHHHHcCCEEEEeccchhhhcccC----CCCCCC
Q 018401 174 ESTGYIDYDQLEKSATLFRPKLIV-AG-ASA-YARLYDY---ERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSPF 243 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~~~~~k~v~-l~-~~n-~g~~~~l---~~I~~la~~~g~~vivD~a~~~g~~~~~----~~~~~l 243 (356)
++ .+|+++|++++++.++++|+ ++ ++| +|.+.+. ++|.++|++||+++|+|++|+.+..... +...+.
T Consensus 146 -~~-~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 223 (397)
T 2zyj_A 146 -EE-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAR 223 (397)
T ss_dssp -TT-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHH
T ss_pred -CC-CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCc
Confidence 22 38999999999765788874 45 666 8877765 4899999999999999999976433211 111110
Q ss_pred C---CccEEEeCCCCcCCCC--CceEEEEec
Q 018401 244 E---YADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 244 ~---~~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
. +.++++.|+||+++ | +.|++++++
T Consensus 224 ~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~ 253 (397)
T 2zyj_A 224 EAGYPGVIYLGSFSKVLS-PGLRVAFAVAHP 253 (397)
T ss_dssp HHTCCCEEEEEESTTTTC-GGGCCEEEECCH
T ss_pred ccCCCeEEEEeccccccc-ccceeEEEecCH
Confidence 0 12388999999886 3 228998876
No 119
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.82 E-value=4.6e-20 Score=176.30 Aligned_cols=156 Identities=15% Similarity=0.144 Sum_probs=122.0
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
+++++.+++++|.+ ++++++||++++..++.+++++||+|+++.+.|+++..++.. .+...|.+++.+ +.+
T Consensus 65 ~~l~~~ia~~~g~~--~~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~----~~~~~g~~~~~v--~~~- 135 (404)
T 1e5e_A 65 SNLEGKIAFLEKTE--ACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEH----ALTKFGIQVDFI--NTA- 135 (404)
T ss_dssp HHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHT----HHHHTTCEEEEE--CTT-
T ss_pred HHHHHHHHHHhCCC--cEEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHH----HHHHcCCEEEEE--CCC-
Confidence 45668889999986 456677888999989999999999999999888776543321 133456656545 332
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHH-cCCEEEEeccchhhhcccCCCCCCCCCccEEEe
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNK-QKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 251 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~-~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~ 251 (356)
|+++|++++++ ++++|+++ ++| +|.+.|+++|.++|++ +|+++|+|++|+.+.....+ .. ++|+++.
T Consensus 136 -----d~~~l~~~i~~-~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~-~~---~~di~~~ 205 (404)
T 1e5e_A 136 -----IPGEVKKHMKP-NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPV-DF---GVDVVVH 205 (404)
T ss_dssp -----STTHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGG-GG---TCSEEEE
T ss_pred -----CHHHHHHhcCC-CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCcc-cc---CCEEEEE
Confidence 78899999987 89999998 777 8999999999999999 99999999999876532111 12 4899999
Q ss_pred CCCCcCCCCC---ceEEEEec
Q 018401 252 TTHKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 252 s~~K~l~gp~---gG~l~~~~ 269 (356)
|+||++++|. +|++++++
T Consensus 206 S~sK~~~~~g~ri~G~~~~~~ 226 (404)
T 1e5e_A 206 SATKYINGHTDVVAGLICGKA 226 (404)
T ss_dssp ETTTTTTCSSCCCCEEEEECH
T ss_pred cCccccCCCCCCeEEEEEECH
Confidence 9999998776 48888877
No 120
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.82 E-value=4.4e-20 Score=180.39 Aligned_cols=194 Identities=11% Similarity=0.016 Sum_probs=141.4
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC----------ccccCCCchHHHHHHHHh
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE----------KWGGSLSGSPSNFQVYTA 128 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~----------~v~v~~sgs~a~~~~l~a 128 (356)
|..+.+.+...+.... ..|.......++|+++.+++++++|.+.+ ..++++|||++|..++.+
T Consensus 92 ~~~~~~~~~~~~n~~~-------~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ 164 (481)
T 4e1o_A 92 PSLLGDMLADAINCLG-------FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLA 164 (481)
T ss_dssp HHHHHHHHHHHHCCCC-------SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccc-------CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHH
Confidence 4445555555554311 12334466789999999999999999643 335689999988877765
Q ss_pred hcC-------------------CCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhh
Q 018401 129 LLK-------------------PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 189 (356)
Q Consensus 129 l~~-------------------~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~ 189 (356)
..+ +++.|+++..+|.++.. .+.+.|..++.+ +.+ +++.+|+++|+++++
T Consensus 165 ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~--------~~~~~g~~~~~v--~~~-~~~~~d~~~Le~~i~ 233 (481)
T 4e1o_A 165 ARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEK--------AGLISLVKMKFL--PVD-DNFSLRGEALQKAIE 233 (481)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHH--------HHHHHTCEEEEE--CCC-TTSCCCHHHHHHHHH
T ss_pred HHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHH--------HHHhCCCceEEE--EcC-CCCcCCHHHHHHHHH
Confidence 532 57899999988877654 334567667666 455 568999999999997
Q ss_pred hcC-----CcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCC---CCCCCCccEEEeCCCCcCCC
Q 018401 190 LFR-----PKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI---PSPFEYADVVTTTTHKSLRG 259 (356)
Q Consensus 190 ~~~-----~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~---~~~l~~~D~~~~s~~K~l~g 259 (356)
+.+ +.+|+++ +++ +|.+.|+++|+++|++||+++++|+||+.+....... ..++..+|++++++||||++
T Consensus 234 ~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~ 313 (481)
T 4e1o_A 234 EDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMV 313 (481)
T ss_dssp HHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSC
T ss_pred HHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCC
Confidence 521 5566666 555 8999999999999999999999999998775432211 11323469999999999999
Q ss_pred CCc-eEEEEecC
Q 018401 260 PRG-AMIFFRKG 270 (356)
Q Consensus 260 p~g-G~l~~~~~ 270 (356)
|.| |+++++++
T Consensus 314 p~g~g~l~~~~~ 325 (481)
T 4e1o_A 314 HFDCTGFWVKDK 325 (481)
T ss_dssp CSSCEEEEESBH
T ss_pred CCceEEEEEeCH
Confidence 999 88888874
No 121
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.82 E-value=9.4e-20 Score=178.76 Aligned_cols=198 Identities=15% Similarity=0.068 Sum_probs=144.0
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCC-CccccCCCchHHHHHHHHhh----c
Q 018401 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP-EKWGGSLSGSPSNFQVYTAL----L 130 (356)
Q Consensus 56 ~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~-~~v~v~~sgs~a~~~~l~al----~ 130 (356)
++.++.+++++.....+.. ...|.......++++++++++++++|+++ +.+++++|||+++..++.++ +
T Consensus 110 ~~~~~~v~~~~~~~~~n~~------~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~ 183 (497)
T 2qma_A 110 PPLMPAVAAEAMIAALNQS------MDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIA 183 (497)
T ss_dssp CCBHHHHHHHHHHHHHCCC------TTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhhccc------ccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHH
Confidence 3557888888866554421 11123334567888899999999999965 56777999999988777763 3
Q ss_pred ---------CC------CC-eeeecCCCCCcccCcccccccccccccce---eeEEEecccCCCCCCCCHHHHHHHhhhc
Q 018401 131 ---------KP------HD-RIMALDLPHGGHLSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLF 191 (356)
Q Consensus 131 ---------~~------gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~i~~~ 191 (356)
.+ || .|+++..+|.++...+ ...|. .++.+ +.+ +++.+|+++|++++.+.
T Consensus 184 ~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~--------~~~g~g~~~v~~v--~~~-~~~~~d~~~L~~~i~~~ 252 (497)
T 2qma_A 184 DKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSA--------SWMGLGEKAVMTV--DAN-ADGTMDITKLDEVIAQA 252 (497)
T ss_dssp HHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHH--------HHTTSCGGGEEEE--CBC-TTSSBCGGGHHHHHHHH
T ss_pred HhhcccchhhcccccccCCeEEEECCCchHHHHHHH--------HHcCCCcccEEEE--ecC-CCCcCCHHHHHHHHHHH
Confidence 13 46 7888888887765432 22332 45555 455 56789999999998752
Q ss_pred ---CCc--EEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCC--CCCCCCccEEEeCCCCcCCCCCc
Q 018401 192 ---RPK--LIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI--PSPFEYADVVTTTTHKSLRGPRG 262 (356)
Q Consensus 192 ---~~k--~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~--~~~l~~~D~~~~s~~K~l~gp~g 262 (356)
.++ +|+++ ++| +|.+.|+++|+++|++||+++|+|++|+.+..+.+.. ..++..+|++++++|||+++|.+
T Consensus 253 ~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~ 332 (497)
T 2qma_A 253 KAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTIS 332 (497)
T ss_dssp HHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSS
T ss_pred HHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcc
Confidence 244 66666 666 8999999999999999999999999998887765421 11223589999999999999988
Q ss_pred -eEEEEecC
Q 018401 263 -AMIFFRKG 270 (356)
Q Consensus 263 -G~l~~~~~ 270 (356)
|+++++++
T Consensus 333 ~G~l~~~~~ 341 (497)
T 2qma_A 333 CGALLVNDK 341 (497)
T ss_dssp CEEEEESCG
T ss_pred eEEEEEeCH
Confidence 99998875
No 122
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.82 E-value=2.6e-20 Score=175.45 Aligned_cols=190 Identities=12% Similarity=0.052 Sum_probs=142.0
Q ss_pred CCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHH
Q 018401 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYT 127 (356)
Q Consensus 48 ~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~ 127 (356)
.+++..+.+..++ +++++.+.+.... |....... ++++.+++++|.+ ++++++||++++..++.
T Consensus 8 ~~~l~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~----~l~~~la~~~~~~--~~~~~~~gt~a~~~~~~ 71 (374)
T 3uwc_A 8 YSYLERQFADIEP-YLNDLREFIKTAD---------FTLGAELE----KFEKRFAALHNAP--HAIGVGTGTDALAMSFK 71 (374)
T ss_dssp SCCHHHHTSSCHH-HHHHHHHHHHHTC---------CSSCHHHH----HHHHHHHHHTTCS--EEEEESCHHHHHHHHHH
T ss_pred eeccccCCCCchH-HHHHHHHHHHcCC---------cccChhHH----HHHHHHHHHhCCC--cEEEeCCHHHHHHHHHH
Confidence 4677777777777 9999988876521 12223333 4558899999987 45678899999998999
Q ss_pred hh-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCC
Q 018401 128 AL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YAR 205 (356)
Q Consensus 128 al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~g~ 205 (356)
++ +++||+|+++.++|.++.. .+...|.+++.+ +.+ +++.+|++++++++++ ++++|+ ++| +|.
T Consensus 72 ~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~--~~~-~~~~~d~~~l~~~~~~-~~~~v~--~~n~~G~ 137 (374)
T 3uwc_A 72 MLNIGAGDEVITCANTFIASVG--------AIVQAGATPVLV--DSE-NGYVIDPEKIEAAITD-KTKAIM--PVHYTGN 137 (374)
T ss_dssp HTTCCTTCEEEEESSSCHHHHH--------HHHHTTCEEEEE--CBC-TTSSBCGGGTGGGCCT-TEEEEC--CBCGGGC
T ss_pred HcCCCCCCEEEECCCccHHHHH--------HHHHcCCEEEEE--ecC-CCCCcCHHHHHHhCCC-CceEEE--EeCCcCC
Confidence 99 9999999999988876643 344567666555 555 5678899999999887 788777 556 899
Q ss_pred cccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCC--CcCCC-CCceEEEEec
Q 018401 206 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRG-PRGAMIFFRK 269 (356)
Q Consensus 206 ~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~--K~l~g-p~gG~l~~~~ 269 (356)
..|+++|.++|+++|+++|+|++|+.|... +....+ ...|++++|+| |++++ +.||++++++
T Consensus 138 ~~~~~~i~~~~~~~~~~li~D~~~~~g~~~-~~~~~~-~~~d~~~~s~~~~K~l~~~g~~g~~~~~~ 202 (374)
T 3uwc_A 138 IADMPALAKIAKKHNLHIVEDACQTILGRI-NDKFVG-SWGQFACFSLHPLKNLNVWSDAGVIITHS 202 (374)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTCTTCEE-TTEETT-SSSSEEEEECSSSSSSCCSSCCEEEEESC
T ss_pred cCCHHHHHHHHHHcCCEEEEeCCCccCcee-CCeecc-ccccEEEEeCCCCCcCCccceeEEEEeCC
Confidence 999999999999999999999999887652 211111 12699999977 99876 4468888766
No 123
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.82 E-value=7e-20 Score=175.54 Aligned_cols=194 Identities=14% Similarity=0.099 Sum_probs=138.9
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCCC
Q 018401 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPHD 134 (356)
Q Consensus 56 ~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~gd 134 (356)
+++++++++++.+.+.......|+. ..+..++.+++++.+++++|++ +.+++++|++++..++.++ +++||
T Consensus 12 ~~~~~~~~~a~~~~~~~~~~~~~~~------~~g~~~l~~~l~~~la~~~g~~--~~i~~~~gt~al~~~~~~~~~~~gd 83 (418)
T 2c81_A 12 PQHSDRTRRKIEEVFQSNRWAISGY------WTGEESMERKFAKAFADFNGVP--YCVPTTSGSTALMLALEALGIGEGD 83 (418)
T ss_dssp SCCCHHHHHHHHHHHHHTCCSTTSB------CCSSCCHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHHHHHhcCCccccCc------ccCCHHHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCcC
Confidence 4568999999999887532111221 1122344556779999999987 3456778899999899998 89999
Q ss_pred eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHH
Q 018401 135 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRK 214 (356)
Q Consensus 135 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~ 214 (356)
+|+++.++|.++.. .+...|.+++.+ +.+.+++.+|+++|++++++ ++++|+++. .+|...++++|.+
T Consensus 84 ~Vl~~~~~~~~~~~--------~~~~~g~~~~~~--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~~~i~~ 151 (418)
T 2c81_A 84 EVIVPSLTWIATAT--------AVLNVNALPVFV--DVEADTYCIDPQLIKSAITD-KTKAIIPVH-LFGSMANMDEINE 151 (418)
T ss_dssp EEEEESSSCTHHHH--------HHHHTTCEEEEE--CBCTTTCSBCHHHHGGGCCT-TEEEECCBC-CTTCCCCHHHHHH
T ss_pred EEEECCCccHhHHH--------HHHHcCCEEEEE--ecCCCCCCcCHHHHHHhhCC-CCeEEEEeC-CcCCcccHHHHHH
Confidence 99999988877654 333557666555 55534678999999999986 788887752 3788899999999
Q ss_pred HHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCceEEEEec
Q 018401 215 VCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 269 (356)
Q Consensus 215 la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~gG~l~~~~ 269 (356)
+|+++|+++|+|++|+.+..........+..+++.++|+||++++++||+++.++
T Consensus 152 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~ 206 (418)
T 2c81_A 152 IAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLTAGEGGIIVTKN 206 (418)
T ss_dssp HHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESC
T ss_pred HHHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcccCCCCeEEEEECC
Confidence 9999999999999999886321111111122556666669988654558888753
No 124
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.82 E-value=1.4e-19 Score=169.90 Aligned_cols=224 Identities=15% Similarity=0.073 Sum_probs=154.1
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccC--CCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~ 122 (356)
+.|+|..++++ +++.|++++.+.+.+.. ..+|+.. ... ++++++++++|++++++++++|+++++
T Consensus 27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~-------~~~----~lr~~la~~~g~~~~~i~~t~g~~~al 95 (360)
T 3hdo_A 27 SWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSA-------SSQ----KLREVAGELYGFDPSWIIMANGSDEVL 95 (360)
T ss_dssp TSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCS-------SCH----HHHHHHHHHHTCCGGGEEEESSHHHHH
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCC-------chH----HHHHHHHHHhCcCcceEEEcCCHHHHH
Confidence 57899888875 58999999999886520 1133322 123 455888889999888888899999999
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 201 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~ 201 (356)
..++.+++++||+|+++.++|.++.. .+...|.++..+ +.+ +++.+ +++++. .++++++++ ++
T Consensus 96 ~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~v--~~~-~~~~~--~~l~~~---~~~~~v~i~~p~ 159 (360)
T 3hdo_A 96 NNLIRAFAAEGEEIGYVHPSYSYYGT--------LAEVQGARVRTF--GLT-GDFRI--AGFPER---YEGKVFFLTTPN 159 (360)
T ss_dssp HHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHHTCEEEEE--CBC-TTSSB--TTCCSS---BCSSEEEEESSC
T ss_pred HHHHHHHhCCCCEEEEcCCChHHHHH--------HHHHCCCEEEEe--eCC-CCCCH--HHHHhh---cCCCEEEEeCCC
Confidence 98999999999999999977765432 444567666555 444 33333 444332 257788887 77
Q ss_pred C-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCC-CCCCccEEEeCCCCcCC--CCCceEEEEecCcchhccC
Q 018401 202 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQ 277 (356)
Q Consensus 202 n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~-~l~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~~~ 277 (356)
| +|.+.|+++|.++|+++|+++|+|++|+.. ........ ...+.++++.|++|+++ |.+.|+++.++
T Consensus 160 nptG~~~~~~~l~~l~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------- 230 (360)
T 3hdo_A 160 APLGPSFPLEYIDELARRCAGMLVLDETYAEF-AESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARP-------- 230 (360)
T ss_dssp TTTCCCCCHHHHHHHHHHBSSEEEEECTTGGG-SSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCH--------
T ss_pred CCCCCCcCHHHHHHHHHHCCCEEEEECChHhh-CCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCH--------
Confidence 7 899999999999999999999999998742 11000000 00125688999999874 33348888866
Q ss_pred CcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 278 GKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
++.+.+..... ..+++.+..+++.++++.
T Consensus 231 ------~~~~~~~~~~~---~~~~~~~~~~a~~~~l~~ 259 (360)
T 3hdo_A 231 ------EVIAALDKIRD---HYNLDRLAQAACVAALRD 259 (360)
T ss_dssp ------HHHHHHHHHSC---SCCSCHHHHHHHHHHHHC
T ss_pred ------HHHHHHHHhCC---CCCCCHHHHHHHHHHhcC
Confidence 45555543321 245777777777777764
No 125
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.82 E-value=5.4e-20 Score=175.31 Aligned_cols=192 Identities=14% Similarity=0.098 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecc
Q 018401 92 MAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 171 (356)
Q Consensus 92 ~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 171 (356)
+..+++++++++++|++ +++++++|++++..++.+++++||+|+++.++|+++...+.. .....|..++.+ +
T Consensus 64 ~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~----~~~~~g~~~~~v--~ 135 (398)
T 2rfv_A 64 PTTDALEKKLAVLERGE--AGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSH----SMPKFGINVRFV--D 135 (398)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHT----HHHHTTCEEEEE--C
T ss_pred hHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHH----HHHHcCCEEEEe--C
Confidence 34456779999999987 445667788999989999999999999999888766543210 113446555444 3
Q ss_pred cCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEE
Q 018401 172 LNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVV 249 (356)
Q Consensus 172 ~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~ 249 (356)
.+ |++++++++++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+...... .. ++|++
T Consensus 136 ~~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~---~~di~ 204 (398)
T 2rfv_A 136 AA------KPEEIRAAMRP-ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPL-QL---GADIV 204 (398)
T ss_dssp TT------SHHHHHHHCCT-TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GG---TCSEE
T ss_pred CC------CHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch-hh---CCcEE
Confidence 32 89999999987 88999987 777 899999999999999999999999999877653211 12 38999
Q ss_pred EeCCCCcCCCCC---ceEEEEecCcchhccCCcchhhhHHH-hhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 250 TTTTHKSLRGPR---GAMIFFRKGVKEINKQGKEVFYDYEE-KINQAVFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 250 ~~s~~K~l~gp~---gG~l~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
+.|+||++++|. ||+++.+++ +.+ .+.........++.+....+++.++++.+
T Consensus 205 ~~s~sK~~~~~g~~~~G~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 261 (398)
T 2rfv_A 205 VHSVTKYINGHGDVIGGIIVGKQE--------------FIDQARFVGLKDITGGCMSPFNAWLTLRGVKTL 261 (398)
T ss_dssp EEETTTTTTCSSCCCCEEEEECHH--------------HHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTH
T ss_pred EEeCcccccCCCCceEEEEEECHH--------------HHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhH
Confidence 999999998775 488888773 332 22221111113466666666666777544
No 126
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.82 E-value=2.8e-19 Score=175.55 Aligned_cols=241 Identities=13% Similarity=0.046 Sum_probs=160.2
Q ss_pred HHcCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCCccccCCCchHHH
Q 018401 45 QWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGGSLSGSPSN 122 (356)
Q Consensus 45 ~~~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~v~~sgs~a~ 122 (356)
..+.+++..+....|+.+++++.+.+.... + .....|+...+..++++++.+++.+.+|. +++++++++|+++++
T Consensus 94 ~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~--~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 170 (500)
T 3tcm_A 94 HPDLLQREEIKTLFSADSISRAKQILAMIP--G-RATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGV 170 (500)
T ss_dssp SGGGGGCTTHHHHSCHHHHHHHHHHHTTST--T-SCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHH
T ss_pred CcccccCCCCcccCCHHHHHHHHHHHHcCC--C-CcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHH
Confidence 345666654433467788888877776521 0 01123444456678888888888888774 677887899999999
Q ss_pred HHHHHhhc-CCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC-CCCCCHHHHHHHhhhc-----CCcE
Q 018401 123 FQVYTALL-KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TGYIDYDQLEKSATLF-----RPKL 195 (356)
Q Consensus 123 ~~~l~al~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~i~~~-----~~k~ 195 (356)
..++.+++ ++||.|+++.++|.++.. .+...|..++.++ ++.+ ++.+|+++|++++++. ++++
T Consensus 171 ~~~~~~l~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ 240 (500)
T 3tcm_A 171 HLMMQLLIRNEKDGILVPIPQYPLYSA--------SIALHGGALVPYY--LNESTGWGLETSDVKKQLEDARSRGINVRA 240 (500)
T ss_dssp HHHHHHHCCSTTEEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CBTTTTSBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCCCCEEEEeCCCcHhHHH--------HHHHcCCEEEEEe--cccccCCCCCHHHHHHHHHHHHhcCCCceE
Confidence 98999987 899999999977765543 4456676665554 4423 4689999999999753 5788
Q ss_pred EEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCC-------C----CCc-cEEEeCCCCcCC
Q 018401 196 IVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP-------F----EYA-DVVTTTTHKSLR 258 (356)
Q Consensus 196 v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~-------l----~~~-D~~~~s~~K~l~ 258 (356)
|+++ ++| ||.+.+ +++|+++|+++|+++|+|++|.......+..... + ... .+++.|++|++.
T Consensus 241 ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 320 (500)
T 3tcm_A 241 LVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYY 320 (500)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTT
T ss_pred EEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCC
Confidence 8876 877 887765 5667777999999999999987644321111111 0 112 266779999884
Q ss_pred ---CCCceEEEE---ecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018401 259 ---GPRGAMIFF---RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 314 (356)
Q Consensus 259 ---gp~gG~l~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~ 314 (356)
|.++|++++ ++ ++.+.+.... ....+++.++.+++..+++
T Consensus 321 g~~G~R~G~~~~~~~~~--------------~~~~~l~~~~--~~~~~~~~~~q~~~~~~l~ 366 (500)
T 3tcm_A 321 GECGKRGGYFEITGFSA--------------PVREQIYKIA--SVNLCSNITGQILASLVMN 366 (500)
T ss_dssp CCGGGCCEEEEEESCCT--------------THHHHHHHHH--HTTCCCCHHHHHHHHHHHS
T ss_pred CCCccceEEEEEeCCCH--------------HHHHHHHHHH--hcccCCCHHHHHHHHHHhc
Confidence 444588887 44 3444333221 1234567777776666664
No 127
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.82 E-value=2.3e-20 Score=189.56 Aligned_cols=210 Identities=15% Similarity=0.051 Sum_probs=143.8
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
.++++.+++++|++.. +++++|+++++.++++++++|||+|+++.+.|.++.... +.+.|+.++.++...+.
T Consensus 176 ~e~e~~lA~~~gae~~-i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~-------~~l~Ga~~v~v~~~~~~ 247 (730)
T 1c4k_A 176 VAAEKHAARVYNADKT-YFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSA-------LAMAGGRPVYLQTNRNP 247 (730)
T ss_dssp HHHHHHHHHHTTCSEE-EEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHH-------TTTTCCEEEEECEEECT
T ss_pred HHHHHHHHHHHCCCcE-EEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHH-------HHHCCCEEEEEeCCccc
Confidence 4567999999999764 445777779999999999999999999999988776420 34567666555432210
Q ss_pred C--CCCCCHHHH-----HHHhhhcC------C----cEEEEc-CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhccc
Q 018401 175 S--TGYIDYDQL-----EKSATLFR------P----KLIVAG-ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAA 236 (356)
Q Consensus 175 ~--~~~~d~~~l-----~~~i~~~~------~----k~v~l~-~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~ 236 (356)
- .+.+|+++| ++++++ + + ++|+++ ++.+|.+.|+++|+++|+++|+++++|+||+.+....
T Consensus 248 ~~i~g~id~e~L~~~~le~~i~~-~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~ 326 (730)
T 1c4k_A 248 YGFIGGIYDSDFDEKKIRELAAK-VDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFI 326 (730)
T ss_dssp TCCEEEECGGGSCHHHHHHHTTT-SSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSS
T ss_pred cCccCCCCHHHHhhhHHHHHhhc-CCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEcccccccccC
Confidence 0 123677777 888876 3 4 888887 5338999999999999999999999999997543211
Q ss_pred C----CCCCCC--CCcc----EEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHH
Q 018401 237 G----VIPSPF--EYAD----VVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHT 305 (356)
Q Consensus 237 ~----~~~~~l--~~~D----~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~ 305 (356)
. ...... .++| ++++|+||+|+||.+ |+++++++.. .++... .+ ...+.........++|+++.
T Consensus 327 ~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l---~g~~~~-i~-~~~~~~~~~~~~stsp~~~~ 401 (730)
T 1c4k_A 327 PMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHI---KGQLRY-CD-HKHFNNSFNLFMSTSPFYPM 401 (730)
T ss_dssp GGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGG---TTSTTC-CC-HHHHHHHHHHHSCSSCCHHH
T ss_pred cccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhh---cCcccc-cC-HHHHHHHHHHhCCCCCcHHH
Confidence 1 111111 1377 999999999999887 7888887521 111000 01 11111111111247899999
Q ss_pred HHHHHHHHHHHhc
Q 018401 306 ITGLAVALKQVCT 318 (356)
Q Consensus 306 ~~al~~Al~~~~~ 318 (356)
++++.+|++++..
T Consensus 402 iaal~aA~~~l~~ 414 (730)
T 1c4k_A 402 YAALDVNAAMQEG 414 (730)
T ss_dssp HHHHHHHHHHHSH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998876
No 128
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.82 E-value=5.3e-20 Score=179.96 Aligned_cols=193 Identities=10% Similarity=0.064 Sum_probs=141.0
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCC---------ccccCCCchHHHHHHHHhh
Q 018401 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPE---------KWGGSLSGSPSNFQVYTAL 129 (356)
Q Consensus 59 ~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~---------~v~v~~sgs~a~~~~l~al 129 (356)
+..+.+.+..++.. .. ..|.......++++++++++++++|++.+ ..++++|||+++..++.++
T Consensus 87 ~~~~~~~~~~~~n~-~~------~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~ 159 (486)
T 1js3_A 87 PAMLADMLCGAIGC-IG------FSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAA 159 (486)
T ss_dssp HHHHHHHHHHHHCC-CC------SSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-Cc------cccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHH
Confidence 34466667666533 11 11233355778999999999999999742 3567999999888777665
Q ss_pred cCC---------CC--------e--eeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh
Q 018401 130 LKP---------HD--------R--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 190 (356)
Q Consensus 130 ~~~---------gd--------~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~ 190 (356)
..+ || + |+++.++|.++.. .+...|++++.+ +.+ +++.+|+++|++++++
T Consensus 160 ~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~--------~~~~~G~~v~~v--~~d-~~~~~d~~~L~~~i~~ 228 (486)
T 1js3_A 160 RTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVER--------AGLIGGVKLKAI--PSD-GKFAMRASALQEALER 228 (486)
T ss_dssp HHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHH--------HHHHHTCEEEEE--CCC-TTSCCCHHHHHHHHHH
T ss_pred HHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHH--------HHHhCCCceEEe--ecC-CCCCCCHHHHHHHHHH
Confidence 321 43 4 7778888866533 445667777666 455 5688999999999976
Q ss_pred cCCc------EEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccC-CCC--CCCCCccEEEeCCCCcCCC
Q 018401 191 FRPK------LIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-VIP--SPFEYADVVTTTTHKSLRG 259 (356)
Q Consensus 191 ~~~k------~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~-~~~--~~l~~~D~~~~s~~K~l~g 259 (356)
+++ +|+++ ++| +|.+.|+++|+++|++||+++++|+||+.+..... ... .++.++|++++++|||+++
T Consensus 229 -~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~ 307 (486)
T 1js3_A 229 -DKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLV 307 (486)
T ss_dssp -HHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSC
T ss_pred -HHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCC
Confidence 443 66666 666 89999999999999999999999999987765432 211 1234689999999999998
Q ss_pred CCc-eEEEEecC
Q 018401 260 PRG-AMIFFRKG 270 (356)
Q Consensus 260 p~g-G~l~~~~~ 270 (356)
|.+ |+++++++
T Consensus 308 p~~~G~l~~~~~ 319 (486)
T 1js3_A 308 NFDCSAMWVKRR 319 (486)
T ss_dssp CSSCEEEEESCH
T ss_pred CcceEEEEEeCH
Confidence 888 99999874
No 129
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.82 E-value=2.6e-19 Score=168.28 Aligned_cols=225 Identities=16% Similarity=0.077 Sum_probs=151.2
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.|+|..++++ +++.+++++.+.+... .+|+. .+..+ +++.+++++|++++++++++|+++++..
T Consensus 25 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~-------~~~~~----l~~~la~~~~~~~~~v~~~~g~~~al~~ 91 (364)
T 1lc5_A 25 QLLDFSANINPLGMPVSVKRALIDNLDCI--ERYPD-------ADYFH----LHQALARHHQVPASWILAGNGETESIFT 91 (364)
T ss_dssp GSEECSSCCCTTCCCHHHHHHHHHTGGGG--GSCCC-------TTCHH----HHHHHHHHHTSCGGGEEEESSHHHHHHH
T ss_pred ceEEeccccCCCCCCHHHHHHHHHHHHHh--hcCCC-------CCHHH----HHHHHHHHHCcCHHHEEECCCHHHHHHH
Confidence 57889888765 5899999999887541 13321 12233 4578888889988888889999999998
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 125 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 125 ~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
++.++ +||+|++..++|.++.. .+...|.++..++ .+. ++..+ ++++.+.+.+ ++++|+++ ++|
T Consensus 92 ~~~~~--~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~-l~~~~~~~~~-~~~~v~i~~p~n 157 (364)
T 1lc5_A 92 VASGL--KPRRAMIVTPGFAEYGR--------ALAQSGCEIRRWS--LREADGWQL-TDAILEALTP-DLDCLFLCTPNN 157 (364)
T ss_dssp HHHHH--CCSEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CCGGGTTCC-CTTHHHHCCT-TCCEEEEESSCT
T ss_pred HHHHc--CCCeEEEeCCCcHHHHH--------HHHHcCCeEEEEe--CCcccccch-hHHHHHhccC-CCCEEEEeCCCC
Confidence 88887 78999999977765432 3445566665554 432 12232 4656666654 78988876 777
Q ss_pred -CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcc-cCCCC-CCCCCccEEEeCCCCcCCCC--CceEEE-EecCcch
Q 018401 203 -YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA-AGVIP-SPFEYADVVTTTTHKSLRGP--RGAMIF-FRKGVKE 273 (356)
Q Consensus 203 -~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~-~~~~~-~~l~~~D~~~~s~~K~l~gp--~gG~l~-~~~~~~~ 273 (356)
+|.+.| +++|.++|++||+++|+|++|+.+... ..... ....+.|+++.|+||+++.| +.|+++ .++
T Consensus 158 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~---- 233 (364)
T 1lc5_A 158 PTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD---- 233 (364)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH----
T ss_pred CCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCH----
Confidence 898887 889999999999999999999754421 11100 01123789999999988533 348888 665
Q ss_pred hccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 274 INKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 274 ~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
++.+.+..... ..+++.+..+++.++++.
T Consensus 234 ----------~~~~~l~~~~~---~~~~~~~~~~~~~~~l~~ 262 (364)
T 1lc5_A 234 ----------AAMARMRRQQM---PWSVNALAALAGEVALQD 262 (364)
T ss_dssp ----------HHHHHHHHHSC---TTCSCHHHHHHHHHGGGC
T ss_pred ----------HHHHHHHHhCC---CCCCCHHHHHHHHHHHhC
Confidence 45554443221 235666776666666643
No 130
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.82 E-value=6.1e-20 Score=175.02 Aligned_cols=158 Identities=16% Similarity=0.158 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEeccc
Q 018401 93 AESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 172 (356)
Q Consensus 93 l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 172 (356)
..+++++.+++++|.+ +.++++||++++..++.+++++||+|+++.++|+++...+... ....|..+..+ +.
T Consensus 66 ~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~----~~~~g~~~~~~--~~ 137 (398)
T 1gc0_A 66 TLNLLEARMASLEGGE--AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHG----IGEFGVKLRHV--DM 137 (398)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHT----GGGGTCEEEEE--CT
T ss_pred HHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHH----HHHcCCEEEEE--CC
Confidence 3445668999999987 3455777789999899999999999999999998765433211 12345555444 32
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEE
Q 018401 173 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 250 (356)
Q Consensus 173 ~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~ 250 (356)
.|++++++++++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+.....+ .. ++|+++
T Consensus 138 ------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~-~~---~~d~~~ 206 (398)
T 1gc0_A 138 ------ADLQALEAAMTP-ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPL-EL---GADLVV 206 (398)
T ss_dssp ------TCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGG-GG---TCSEEE
T ss_pred ------CCHHHHHHhcCC-CCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hh---CceEEE
Confidence 289999999987 89999987 777 899999999999999999999999999988754322 12 389999
Q ss_pred eCCCCcCCCCC---ceEEEEec
Q 018401 251 TTTHKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 251 ~s~~K~l~gp~---gG~l~~~~ 269 (356)
.|+||+++||. ||+++.++
T Consensus 207 ~S~sK~~~~~~~~~~G~l~~~~ 228 (398)
T 1gc0_A 207 HSATKYLSGHGDITAGIVVGSQ 228 (398)
T ss_dssp EETTTTTTCSSSCCCEEEEECH
T ss_pred ECCccccCCCCCCeEEEEEECh
Confidence 99999998876 58888876
No 131
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.81 E-value=9.7e-20 Score=186.36 Aligned_cols=205 Identities=19% Similarity=0.110 Sum_probs=143.5
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
...++.+++++|.+.. +++++|+++++.+++.++++|||+|+++.++|.++.. ++...|+.++.++...+
T Consensus 208 ~~~ee~la~l~G~d~~-i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~--------~~~~~G~~~v~v~~~~~- 277 (755)
T 2vyc_A 208 GESEKYAARVFGADRS-WSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ--------GLMLTGAKPVYMVPSRN- 277 (755)
T ss_dssp HHHHHHHHHHHTCSEE-EEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHHCCEEEEECCCBC-
T ss_pred HHHHHHHHHHhCCCce-EEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHH--------HHHHcCCEEEEEeCCCC-
Confidence 3566899999998743 4447777799999999999999999999998887654 33456766665643221
Q ss_pred CC---CCC-----CHHHHHHHhhhc-CCc--------EEEEcCCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhccc
Q 018401 175 ST---GYI-----DYDQLEKSATLF-RPK--------LIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA 236 (356)
Q Consensus 175 ~~---~~~-----d~~~l~~~i~~~-~~k--------~v~l~~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~ 236 (356)
+. +.+ |+++|++++++. +++ +++++.+| +|.+.|+++|+++|++||+++++|+||+.+....
T Consensus 278 ~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~ 357 (755)
T 2vyc_A 278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFN 357 (755)
T ss_dssp TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGC
T ss_pred ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchhcccC
Confidence 11 235 999999999752 344 77777335 8999999999999999999999999997543221
Q ss_pred CC--CCCCCCC--ccE------EEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHH
Q 018401 237 GV--IPSPFEY--ADV------VTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHT 305 (356)
Q Consensus 237 ~~--~~~~l~~--~D~------~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~ 305 (356)
.. ...++.+ +|+ +++|+||+++||.+ |+++++++... . + ...+.........++|+++.
T Consensus 358 ~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~-------i--~-~~~~~~~~~~~~s~sp~~~~ 427 (755)
T 2vyc_A 358 PIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGA-------I--N-FSRFNQAYMMHATTSPLYAI 427 (755)
T ss_dssp GGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTC-------C--C-HHHHHHHHHHTSCSSCCHHH
T ss_pred cccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccc-------c--C-HHHHHHHHHHhCCCCHHHHH
Confidence 11 1112233 566 99999999999986 88888774100 0 0 01111111112247999999
Q ss_pred HHHHHHHHHHHhcc
Q 018401 306 ITGLAVALKQVCTL 319 (356)
Q Consensus 306 ~~al~~Al~~~~~~ 319 (356)
++++.+|++++..+
T Consensus 428 iaal~aA~~~l~~~ 441 (755)
T 2vyc_A 428 CASNDVAVSMMDGN 441 (755)
T ss_dssp HHHHHHHHHHHSTH
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999988764
No 132
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.81 E-value=1e-19 Score=171.56 Aligned_cols=194 Identities=13% Similarity=0.076 Sum_probs=135.8
Q ss_pred HHHHHHHHc-CCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 97 CQKRALEAF-RLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 97 ~~~~la~~~-g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
+++.+++++ +++++++++++||++++..++.+++++||+|+++.+.|.++.. .+...|.+++.++++.. +
T Consensus 68 l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~-~ 138 (375)
T 3op7_A 68 FKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD--------IPKSLGAEVDLWQIEEE-N 138 (375)
T ss_dssp HHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH--------HHHHTTCEEEEEEEEGG-G
T ss_pred HHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEEecccc-C
Confidence 347777777 4677888889999999999999999999999999977765532 34456766666654322 3
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCC-CCCCCccEE
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFEYADVV 249 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~-~~l~~~D~~ 249 (356)
++.+|+++|++++++ ++++|+++ ++| +|.+.| +++|.++|++||+++|+|++|+..... .... ....+.+++
T Consensus 139 ~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~i~ 216 (375)
T 3op7_A 139 GWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL-DVPSIIEVYDKGIA 216 (375)
T ss_dssp TTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS-CCCCHHHHCTTEEE
T ss_pred CCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc-CCCchhhhcCCEEE
Confidence 456899999999987 89999887 667 898888 999999999999999999998754322 1100 001135688
Q ss_pred EeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 250 TTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 250 ~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
+.|++|+++.| +.|++++++ ++.+.+....... ..+.+.+..+++..+++..
T Consensus 217 ~~s~sK~~~~~G~r~G~v~~~~--------------~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 270 (375)
T 3op7_A 217 VNSLSKTYSLPGIRIGWVAANH--------------QVTDILRDYRDYT-MICAGVFDDLVAQLALAHY 270 (375)
T ss_dssp EEESSSSSSCGGGCCEEEECCH--------------HHHHHHTTTGGGT-TSCCCHHHHHHHHHHHHTH
T ss_pred EeEChhhcCCcccceEEEEeCH--------------HHHHHHHHHHhhh-ccCCCcHHHHHHHHHHhcc
Confidence 99999988523 338888865 5666554332212 2344555555555666643
No 133
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.81 E-value=5.7e-20 Score=179.28 Aligned_cols=174 Identities=13% Similarity=-0.018 Sum_probs=132.5
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCC---------ccccCCCchHHHHHHHHhhc-------------------CCCCee
Q 018401 85 GGNEYIDMAESLCQKRALEAFRLDPE---------KWGGSLSGSPSNFQVYTALL-------------------KPHDRI 136 (356)
Q Consensus 85 ~~~~~~~~l~~~~~~~la~~~g~~~~---------~v~v~~sgs~a~~~~l~al~-------------------~~gd~V 136 (356)
.......++|+++.+|+++++|.+.+ ..+|++|||++|..++.+.. .|++.|
T Consensus 106 ~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v 185 (475)
T 3k40_A 106 IASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVG 185 (475)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEE
T ss_pred cCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEE
Confidence 34466789999999999999999743 35668999988887776542 135689
Q ss_pred eecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcC-----CcEEEEc-CCC-CCCcccH
Q 018401 137 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR-----PKLIVAG-ASA-YARLYDY 209 (356)
Q Consensus 137 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~-----~k~v~l~-~~n-~g~~~~l 209 (356)
+++..+|.++.. .+.+.|..++.+ +.+ +++ +|+++|++++.+.+ +.+|+++ +++ +|.+.|+
T Consensus 186 i~s~~~H~s~~~--------~~~~~g~~~~~v--~~d-~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l 253 (475)
T 3k40_A 186 YCSDQAHSSVER--------AGLLGGVKLRSV--QSE-NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYL 253 (475)
T ss_dssp EEETTSCHHHHH--------HHHHHTCEEEEE--CCB-TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCH
T ss_pred EECCCchHHHHH--------HHHHcCCceEEE--ECC-CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCH
Confidence 999999987654 344567667666 555 457 99999999997621 5566666 555 8999999
Q ss_pred HHHHHHHHHcCCEEEEeccchhhhcccCCC---CCCCCCccEEEeCCCCcCCCCCc-eEEEEecC
Q 018401 210 ERIRKVCNKQKAIMLADMAHISGLVAAGVI---PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 270 (356)
Q Consensus 210 ~~I~~la~~~g~~vivD~a~~~g~~~~~~~---~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 270 (356)
++|+++|++||+++++|+||+.+....... ..++..+|++++++|||+++|.| |+++++++
T Consensus 254 ~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~ 318 (475)
T 3k40_A 254 DECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDP 318 (475)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSG
T ss_pred HHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCH
Confidence 999999999999999999998775532211 11223479999999999999999 99998875
No 134
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.81 E-value=1.5e-19 Score=171.41 Aligned_cols=191 Identities=13% Similarity=0.080 Sum_probs=143.5
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVY 126 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l 126 (356)
+.|+|.. +..|+++++++.+.+.+.+ + ...... .++++.+++++|.+ ++++++||++++..++
T Consensus 9 ~~i~~~~--p~~~~~~~~a~~~~~~~~~---~------~~~~~~----~~l~~~la~~~~~~--~~~~~~~gt~al~~~~ 71 (393)
T 1mdo_A 9 DFLPFSR--PAMGAEELAAVKTVLDSGW---I------TTGPKN----QELEAAFCRLTGNQ--YAVAVSSATAGMHIAL 71 (393)
T ss_dssp CCBCSCC--CCCCHHHHHHHHHHHHHTC---C------SSSHHH----HHHHHHHHHHHCCS--EEEEESCHHHHHHHHH
T ss_pred cccccCC--CCCCHHHHHHHHHHHhcCC---c------CCChHH----HHHHHHHHHHhCCC--cEEEecChHHHHHHHH
Confidence 4567754 3467899999998886521 1 111223 34558888888875 5667999999999999
Q ss_pred Hhh-cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 018401 127 TAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYAR 205 (356)
Q Consensus 127 ~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~ 205 (356)
.++ +++||+|+++.++|.++.. .+...|.+++.+ +.+++++.+|+++|++++++ ++++|++++ .+|.
T Consensus 72 ~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v--~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~-~~G~ 139 (393)
T 1mdo_A 72 MALGIGEGDEVITPSMTWVSTLN--------MIVLLGANPVMV--DVDRDTLMVTPEHIEAAITP-QTKAIIPVH-YAGA 139 (393)
T ss_dssp HHTTCCTTCEEEEESSSCHHHHH--------HHHHTTCEEEEE--CBCTTTCCBCHHHHHHHCCT-TEEEECCBC-GGGC
T ss_pred HHcCCCCCCEEEeCCCccHhHHH--------HHHHCCCEEEEE--eccCCcCCCCHHHHHHhcCC-CceEEEEeC-CCCC
Confidence 999 9999999999988876643 334557666555 55534467999999999986 788888763 3788
Q ss_pred cccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCC--CcCCCCCceEEEEec
Q 018401 206 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFRK 269 (356)
Q Consensus 206 ~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~--K~l~gp~gG~l~~~~ 269 (356)
+.++++|.++|+++|+++|+|++|+.|....+ ...+. .|++++|+| |+++|+.||+++.++
T Consensus 140 ~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~~~--~d~~~~S~~k~K~l~~~~~g~~~~~~ 202 (393)
T 1mdo_A 140 PADLDAIYALGERYGIPVIEDAAHATGTSYKG-RHIGA--RGTAIFSFHAIKNITCAEGGIVVTDN 202 (393)
T ss_dssp CCCHHHHHHHHHHHTCCBCEECTTCTTCEETT-EETTS--SSEEEEECCTTSSSCSSSCEEEEESC
T ss_pred cCCHHHHHHHHHHcCCeEEEECccccCCeECC-eecCC--CCeEEEeCCCCCccccccceEEEeCC
Confidence 88999999999999999999999988765422 11111 799999999 999877778888863
No 135
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.81 E-value=7e-20 Score=176.73 Aligned_cols=219 Identities=9% Similarity=-0.022 Sum_probs=143.6
Q ss_pred HcCC-eeecCCCCCcHHHHHHHHhhhhccCCC---CC--CC----CccCCCchhHHHHHHHHHHHHHHHcCC--CCCccc
Q 018401 46 WKGL-ELIPSENFTSVSVMQAVGSVMTNKYSE---GY--PG----ARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWG 113 (356)
Q Consensus 46 ~~~i-~L~~~~~~~~~~V~~a~~~~l~~~~~~---~~--~~----~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~v~ 113 (356)
++.| +|..+.+..++.+.+++.+++.+.+.. +. +. ...|+...+..++++++.+++.+.+|. ++++++
T Consensus 31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~ 110 (444)
T 3if2_A 31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIA 110 (444)
T ss_dssp SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEE
T ss_pred chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEE
Confidence 4678 898887777777777666655442211 00 11 122344455678888888888777765 677888
Q ss_pred cCCCchHHHHHHHHhhcCCCC--------------eeeec-CCCCCcccCcccccccccccccceeeEEEecccCCCC--
Q 018401 114 GSLSGSPSNFQVYTALLKPHD--------------RIMAL-DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST-- 176 (356)
Q Consensus 114 v~~sgs~a~~~~l~al~~~gd--------------~Vl~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-- 176 (356)
+|+|+++++..++.+++++|| +|+++ .++|.++....... ......| ...++++.+.++
T Consensus 111 ~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~g~ 186 (444)
T 3if2_A 111 LTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEG--QHFAAVL--PHIDEVTHDGEEGF 186 (444)
T ss_dssp EESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSS--CCEEECC--CEEEEEEETTEEEE
T ss_pred EecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhccccc--chhhccC--ceEEecccccccCc
Confidence 899999999989999999998 78775 77776664322100 0111223 333444554211
Q ss_pred --CCCCHHHHHHH---hhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCC--CCC
Q 018401 177 --GYIDYDQLEKS---ATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE 244 (356)
Q Consensus 177 --~~~d~~~l~~~---i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~--~l~ 244 (356)
+.+|+++|+++ +.+ ++++|+++ ++| +|.+.+ +++|.++|++||+++|+|++|+........... ...
T Consensus 187 ~~~~~d~~~l~~~l~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 265 (444)
T 3if2_A 187 FKYRVDFEALENLPALKEG-RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWD 265 (444)
T ss_dssp EEEECCHHHHHTCHHHHTT-CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCC
T ss_pred cccCCCHHHHHHHHHhcCC-CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCC
Confidence 36899999987 454 78998887 878 898888 888899999999999999999743221111110 112
Q ss_pred CccEEEeCCCCcCCC-CCceEEEEec
Q 018401 245 YADVVTTTTHKSLRG-PRGAMIFFRK 269 (356)
Q Consensus 245 ~~D~~~~s~~K~l~g-p~gG~l~~~~ 269 (356)
+.+++++|+||++.+ .+.|+++.++
T Consensus 266 ~~~i~~~S~sK~~~~G~r~G~~~~~~ 291 (444)
T 3if2_A 266 NNTILCFSLSKIGLPGMRTGIIVADA 291 (444)
T ss_dssp TTEEEEEESTTTTCGGGCCEEEECCH
T ss_pred CCEEEEechhhccCCCCceEEEEECH
Confidence 478999999996322 2228887766
No 136
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.81 E-value=1.5e-19 Score=167.60 Aligned_cols=189 Identities=12% Similarity=0.084 Sum_probs=134.1
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++++.+++++|++ + .+++++|++++..++.+++++||+|+++.++|.++...+... ....|.++..+ +.
T Consensus 2 ~l~~~la~~~g~~-~-~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~----~~~~g~~~~~~--~~--- 70 (331)
T 1pff_A 2 ALEGKIAKLEHAE-A-CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQ----LRKFGVEVDFI--DM--- 70 (331)
T ss_dssp HHHHHHHHHHTCS-E-EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTH----HHHTTCEEEEE--CT---
T ss_pred hHHHHHHHHhCCC-e-EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHH----HHhcCCEEEEe--CC---
Confidence 3568899999987 3 345666689999899988999999999998887764432210 12245555444 22
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHH-cCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 176 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNK-QKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~-~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
.|++++++++++ ++++|+++ ++| +|.+.|+++|.++|++ +|+++|+|++|+.|.....+ .. ++|++++|
T Consensus 71 ---~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~-~~---~~d~~~~s 142 (331)
T 1pff_A 71 ---AVPGNIEKHLKP-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPL-DL---GVDIVVHS 142 (331)
T ss_dssp ---TSTTHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGG-GG---TCSEEEEE
T ss_pred ---CCHHHHHHhhcC-CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChh-hc---CCcEEEEE
Confidence 378899998886 78999887 667 8999999999999999 99999999999988764333 23 38999999
Q ss_pred CCCcCCCCC---ceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 253 THKSLRGPR---GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 253 ~~K~l~gp~---gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
+||++++|. +|+++++++ ++.+.+......+..++.+.....++..+++.+
T Consensus 143 ~~K~~~~~~~r~~G~~~~~~~-------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 196 (331)
T 1pff_A 143 ATKYINGHTDVVAGLVCSRAD-------------IIAKVKSQGIKDITGAIISPHDAWLITRGTLTL 196 (331)
T ss_dssp TTTTTSSSSSCCCEEEEECHH-------------HHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_pred CccccCCCCCceEEEEEeCcH-------------HHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchH
Confidence 999998775 578888762 344444443222022455555555444555443
No 137
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.81 E-value=4.8e-19 Score=165.86 Aligned_cols=223 Identities=13% Similarity=0.041 Sum_probs=152.8
Q ss_pred HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHH
Q 018401 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 46 ~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~ 123 (356)
++.|+|..++++ +|+.|++++.+.+.... +|+.. ... +++++++++++++++++++++|+++++.
T Consensus 26 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~-------~~~----~l~~~la~~~~~~~~~i~~~~g~t~al~ 92 (361)
T 3ftb_A 26 RELLDYSSNINPLGIPKSFLNNIDEGIKNLG--VYPDV-------NYR----RLNKSIENYLKLKDIGIVLGNGASEIIE 92 (361)
T ss_dssp --CEETTCCCCTTCSCHHHHTTHHHHHHGGG--SCCCT-------TCH----HHHHHHHHHHTCCSCEEEEESSHHHHHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHHhc--CCCCc-------cHH----HHHHHHHHHhCCCcceEEEcCCHHHHHH
Confidence 467899888775 57999999998877522 33322 223 4558888889998888888999999999
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
.++.++ |+|+++.++|.++.. .+...|.+++.+ +.+ +++.++++++++++++ +++|+++ ++|
T Consensus 93 ~~~~~~----d~vi~~~~~~~~~~~--------~~~~~g~~~~~~--~~~-~~~~~~~~~l~~~l~~--~~~v~i~~p~n 155 (361)
T 3ftb_A 93 LSISLF----EKILIIVPSYAEYEI--------NAKKHGVSVVFS--YLD-ENMCIDYEDIISKIDD--VDSVIIGNPNN 155 (361)
T ss_dssp HHHTTC----SEEEEEESCCTHHHH--------HHHHTTCEEEEE--ECC-TTSCCCHHHHHHHTTT--CSEEEEETTBT
T ss_pred HHHHHc----CcEEEecCChHHHHH--------HHHHcCCeEEEe--ecC-cccCCCHHHHHHhccC--CCEEEEeCCCC
Confidence 788777 999999977765432 344557666555 454 3356788999999975 8999887 777
Q ss_pred -CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcc--cCCCC-CCCCCccEEEeCCCCcCCCC--CceEEEEecCcch
Q 018401 203 -YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA--AGVIP-SPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKE 273 (356)
Q Consensus 203 -~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~--~~~~~-~~l~~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~ 273 (356)
+|.+.+ +++|+++|++||+++|+|++|+..... ..... ....+.++++.|++|+++.| +.|++++.++
T Consensus 156 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~--- 232 (361)
T 3ftb_A 156 PNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNK--- 232 (361)
T ss_dssp TTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCH---
T ss_pred CCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCH---
Confidence 887765 667788888999999999999754432 11100 01112458888999987422 2388774332
Q ss_pred hccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018401 274 INKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 314 (356)
Q Consensus 274 ~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~ 314 (356)
++.+.+..... ..+++.+..+++.++++
T Consensus 233 ----------~~~~~~~~~~~---~~~~~~~~~~~~~~~l~ 260 (361)
T 3ftb_A 233 ----------EIAAKIKAKQN---PWNINCFAEMAAINCLK 260 (361)
T ss_dssp ----------HHHHHHHTTSC---TTCSCHHHHHHHHHTSS
T ss_pred ----------HHHHHHHhhCC---CCCCCHHHHHHHHHHhc
Confidence 55555544321 24777788777777775
No 138
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.81 E-value=3.9e-19 Score=170.76 Aligned_cols=243 Identities=12% Similarity=0.052 Sum_probs=155.2
Q ss_pred cCCeeecCCCCC-cHHHHHHHHhhhhccC-CCC---CCCCccCCCchhHHHHHHHHHHHHHHHcC----CCCCccccCCC
Q 018401 47 KGLELIPSENFT-SVSVMQAVGSVMTNKY-SEG---YPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGGSLS 117 (356)
Q Consensus 47 ~~i~L~~~~~~~-~~~V~~a~~~~l~~~~-~~~---~~~~~~~~~~~~~~~l~~~~~~~la~~~g----~~~~~v~v~~s 117 (356)
..|+|..++++. ++.+.+++.+...... ..+ ......|+...+..++++++.+++.+.+| ++++++++++|
T Consensus 37 ~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G 116 (428)
T 1iay_A 37 GVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGG 116 (428)
T ss_dssp SBEECSSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEH
T ss_pred ceeeeccccchhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccC
Confidence 457888888875 4567777764321000 000 00001222223356788777777777777 56778877999
Q ss_pred chHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC-CCCCCCHHHHHHHhhh-----c
Q 018401 118 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATL-----F 191 (356)
Q Consensus 118 gs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~i~~-----~ 191 (356)
+++++..++.+++++||+|+++.++|.++.... ....|..++.+ +.+. +++.+|+++|++++.+ .
T Consensus 117 ~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~-------~~~~g~~~~~v--~~~~~~~~~~d~~~l~~~l~~~~~~~~ 187 (428)
T 1iay_A 117 ATGANETIIFCLADPGDAFLVPSPYYPAFNRDL-------RWRTGVQLIPI--HCESSNNFKITSKAVKEAYENAQKSNI 187 (428)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHT-------TTTTCCEEEEE--CCCTTTTTCCCHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHhCCCCCeEEEccCCCcchHHHH-------HHhcCCEEEEe--ecCCccCCcCCHHHHHHHHHHHHhcCC
Confidence 999999899999999999999998887653211 12346556555 4442 2357899999998864 2
Q ss_pred CCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC-CCC-CCCC-C-------cc--EEEeCCC
Q 018401 192 RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-VIP-SPFE-Y-------AD--VVTTTTH 254 (356)
Q Consensus 192 ~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~-~~~-~~l~-~-------~D--~~~~s~~ 254 (356)
++++|+++ ++| +|.+.+ +++|.++|+++|+++|+|++|+....... ... ..+. . .| +++.|+|
T Consensus 188 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~s 267 (428)
T 1iay_A 188 KVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLS 267 (428)
T ss_dssp CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEEST
T ss_pred ceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecch
Confidence 68888877 777 898888 88999999999999999999975432211 000 0010 1 57 8899999
Q ss_pred CcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018401 255 KSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 314 (356)
Q Consensus 255 K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~ 314 (356)
|+++.| +.|++++.++ ++.+.+..... +.+.+.+..+++.++++
T Consensus 268 K~~g~~Glr~G~~~~~~~-------------~~~~~~~~~~~---~~~~~~~~~~a~~~~l~ 313 (428)
T 1iay_A 268 KDMGLPGFRVGIIYSFND-------------DVVNCARKMSS---FGLVSTQTQYFLAAMLS 313 (428)
T ss_dssp TTSSCGGGCEEEEEESCH-------------HHHHHHHHHHT---TSCCCHHHHHHHHHHTT
T ss_pred hhcCCCCceEEEEEeCCH-------------HHHHHHHHHHh---cccCCHHHHHHHHHHhc
Confidence 987422 3388888432 34444433211 13455566665555554
No 139
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.80 E-value=3e-19 Score=172.63 Aligned_cols=203 Identities=12% Similarity=0.024 Sum_probs=135.6
Q ss_pred cCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHc--CCCCCccccCCCchHHH
Q 018401 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF--RLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 47 ~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~--g~~~~~v~v~~sgs~a~ 122 (356)
+.|+|..+++ +++|.|++++.+.+.... .......|+...+..++++++.+++. + +++++++++++|+++++
T Consensus 70 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~t~G~~~al 145 (449)
T 3qgu_A 70 KIISLGIGDTTEPLPKYIADAMAKAAAGLA--TREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFISDGSKCDI 145 (449)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHGGG--GSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEEESCHHHHH
T ss_pred CEEEeeCCCCCCCCCHHHHHHHHHHHHhhc--cccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEEccCHHHHH
Confidence 4789987776 368999999998887421 01111223333445667655555544 3 45777887899999998
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCccccccccccccccee----------eEEEecccCCC-CCCCCHHHHHHHhhhc
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF----------FETMPYRLNES-TGYIDYDQLEKSATLF 191 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~~~-~~~~d~~~l~~~i~~~ 191 (356)
..+ .+++++||+|+++.+.|.++.. .+...|.. +..++ .+.+ ....|++++ +
T Consensus 146 ~~~-~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~- 208 (449)
T 3qgu_A 146 ARI-QMMFGSKPTVAVQDPSYPVYVD--------TSVMMGMTGDHNGTGFDGIEYMV--CNPDNHFFPDLSKA-----K- 208 (449)
T ss_dssp HHH-HHHHCSSSCEEEEESCCTHHHH--------HHHHHTCSCCBCSSSBTTEEEEE--CCGGGTTCCCGGGC-----C-
T ss_pred HHH-HHHhCCCCEEEEcCCCChhHHH--------HHHHcCCcccccccccceeEEEe--cccccCCcCChhHc-----C-
Confidence 866 8889999999999987766543 33345544 54454 4322 334554432 3
Q ss_pred CCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc----CCCCCCC-CCccEEEeCCCCcCC--C
Q 018401 192 RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSPF-EYADVVTTTTHKSLR--G 259 (356)
Q Consensus 192 ~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~~l-~~~D~~~~s~~K~l~--g 259 (356)
++++|+++ ++| +|.+.+ +++|+++|++||+++|+|++|+...... .+..... .+.++++.|++|+++ |
T Consensus 209 ~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 288 (449)
T 3qgu_A 209 RTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTG 288 (449)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTT
T ss_pred CCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCcc
Confidence 78999987 777 887765 7788888999999999999997633221 1111111 146799999999874 3
Q ss_pred CCceEEEEecC
Q 018401 260 PRGAMIFFRKG 270 (356)
Q Consensus 260 p~gG~l~~~~~ 270 (356)
.+.|+++.+++
T Consensus 289 ~r~G~~~~~~~ 299 (449)
T 3qgu_A 289 VRLGWTVVPKA 299 (449)
T ss_dssp CCCEEEECCTT
T ss_pred ceeEEEecCHH
Confidence 34499998775
No 140
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.79 E-value=2.3e-19 Score=167.27 Aligned_cols=200 Identities=19% Similarity=0.162 Sum_probs=134.3
Q ss_pred cCCeeecCCCC-CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHH
Q 018401 47 KGLELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQV 125 (356)
Q Consensus 47 ~~i~L~~~~~~-~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~ 125 (356)
+.|+|..++++ +++.+++++.+..... ..|+...... ++++++++++|.+ ++++++||++++..+
T Consensus 4 ~~i~~~~~~~~~p~~~~~~a~~~~~~~~--------~~y~~~~~~~----~l~~~la~~~g~~--~~~~~~~gt~a~~~~ 69 (347)
T 1jg8_A 4 MMIDLRSDTVTKPTEEMRKAMAQAEVGD--------DVYGEDPTIN----ELERLAAETFGKE--AALFVPSGTMGNQVS 69 (347)
T ss_dssp -CEECSCGGGCCCCHHHHHHHHTCCCCC--------GGGTCCHHHH----HHHHHHHHHHTCS--EEEEESCHHHHHHHH
T ss_pred eEEEeccccCCCCCHHHHHHHhcCCCCC--------cccCCChHHH----HHHHHHHHHhCCc--eEEEecCcHHHHHHH
Confidence 35778777764 5678888886543210 1222223333 4558889999985 346688888888888
Q ss_pred HHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc-
Q 018401 126 YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG- 199 (356)
Q Consensus 126 l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~-----~~k~v~l~- 199 (356)
+.++++|||+|++++++|.+.+.... .+...|.+++.+ .+ +++.+|+++|++++++. ++++|+++
T Consensus 70 ~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~v---~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~ 140 (347)
T 1jg8_A 70 IMAHTQRGDEVILEADSHIFWYEVGA-----MAVLSGVMPHPV---PG-KNGAMDPDDVRKAIRPRNIHFPRTSLIAIEN 140 (347)
T ss_dssp HHHHCCTTCEEEEETTCHHHHSSTTH-----HHHHTCCEEEEE---CE-ETTEECHHHHHHHSCCSCTTSCCEEEEEEES
T ss_pred HHHhcCCCCEEEEcCcchhhhccccc-----hhhccCeEEEEe---cC-CCCccCHHHHHHHhccccccccCceEEEEec
Confidence 88889999999999987765432110 123346555433 22 34668999999998741 58888887
Q ss_pred CCC-C-CCccc---HHHHHHHHHHcCCEEEEeccchhhhcc-cCCCCCCC-CCccEEEeCCCCcCCCCCceEEEEec
Q 018401 200 ASA-Y-ARLYD---YERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 269 (356)
Q Consensus 200 ~~n-~-g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~-~~~~~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~ 269 (356)
++| + |.+.| +++|.++|+++|+++|+|++|..+... .+.....+ .++|.+++|+||++++|.|++++.++
T Consensus 141 ~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~ 217 (347)
T 1jg8_A 141 THNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDR 217 (347)
T ss_dssp SBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECH
T ss_pred cccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCH
Confidence 766 7 87665 568889999999999999998654321 11111111 13788889999999888766666555
No 141
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.79 E-value=1.3e-18 Score=167.23 Aligned_cols=258 Identities=10% Similarity=0.047 Sum_probs=166.5
Q ss_pred chhhhcccccccChHHHHHHHHHHHHH-HcCCeeecCCCCC--cHH--H-------------HHHHHhhhhccCCCCCCC
Q 018401 19 WPKQLNAPLEVVDPEIADIIEHEKARQ-WKGLELIPSENFT--SVS--V-------------MQAVGSVMTNKYSEGYPG 80 (356)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~L~~~~~~~--~~~--V-------------~~a~~~~l~~~~~~~~~~ 80 (356)
++.+++++...+.+..+..+.+..... ++.|+|..+.+.. +|. . .++....+ +|
T Consensus 3 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~Y-- 74 (425)
T 2r2n_A 3 YARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKRAL------QY-- 74 (425)
T ss_dssp GGGGSCHHHHTCCCCSGGGHHHHHHHSCTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHHHHT------SC--
T ss_pred hhHHHHHHHhcCCCchHHHHHHHhhcCCCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchhhhc------CC--
Confidence 444566666666666666666543332 4678888766532 110 0 01111111 22
Q ss_pred CccCCCchhHHHHHHHHHHHHHHHcCCCC---------CccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCccc
Q 018401 81 ARYYGGNEYIDMAESLCQKRALEAFRLDP---------EKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGY 151 (356)
Q Consensus 81 ~~~~~~~~~~~~l~~~~~~~la~~~g~~~---------~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~ 151 (356)
+...+..++++++++++++.+|.+. +++++++|+++++..++.++++|||+|++..+.|.++.
T Consensus 75 ----~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---- 146 (425)
T 2r2n_A 75 ----SPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTL---- 146 (425)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHH----
T ss_pred ----CCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH----
Confidence 2234456788889999999899854 47777999999999899999999999999996665443
Q ss_pred ccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh-----------cCCcEEEEc--CCC-CCCcccHH---HHHH
Q 018401 152 QTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----------FRPKLIVAG--ASA-YARLYDYE---RIRK 214 (356)
Q Consensus 152 ~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~-----------~~~k~v~l~--~~n-~g~~~~l~---~I~~ 214 (356)
..+...|.+++.+ +.+ + ..+|+++|++++.+ .++++|++. ++| +|.+.+.+ +|.+
T Consensus 147 ----~~~~~~g~~~~~v--~~~-~-~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~ 218 (425)
T 2r2n_A 147 ----QSLHPLGCNIINV--ASD-E-SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYE 218 (425)
T ss_dssp ----HHHGGGTCEEEEE--CEE-T-TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred ----HHHHHcCCEEEEe--CcC-C-CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHH
Confidence 2445567666555 444 2 24899999999872 258888774 567 89887755 8999
Q ss_pred HHHHcCCEEEEeccchhhhccc----CCCCCCCCCccEEEeCCCCcCCCCC--ceEEEEecCcchhccCCcchhhhHHHh
Q 018401 215 VCNKQKAIMLADMAHISGLVAA----GVIPSPFEYADVVTTTTHKSLRGPR--GAMIFFRKGVKEINKQGKEVFYDYEEK 288 (356)
Q Consensus 215 la~~~g~~vivD~a~~~g~~~~----~~~~~~l~~~D~~~~s~~K~l~gp~--gG~l~~~~~~~~~~~~g~~~~~~~~~~ 288 (356)
+|++||+++|+|++|+...... .+......+.++++.|++|+++ |. .|+++.++ ++.+.
T Consensus 219 ~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~--------------~l~~~ 283 (425)
T 2r2n_A 219 LARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPK--------------PLIER 283 (425)
T ss_dssp HHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEH--------------HHHHH
T ss_pred HHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCH--------------HHHHH
Confidence 9999999999999997432211 1111111135688999999885 32 39999887 44444
Q ss_pred hccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 289 INQAVFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 289 ~~~~~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
+..... ....+++.+..+++.++|+.+
T Consensus 284 l~~~~~-~~~~~~~~~~q~a~~~~l~~~ 310 (425)
T 2r2n_A 284 VILHIQ-VSTLHPSTFNQLMISQLLHEW 310 (425)
T ss_dssp HHHHHH-TTTCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHH-HhcCCCCHHHHHHHHHHHHhc
Confidence 432211 112456677777777777653
No 142
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.79 E-value=2.6e-19 Score=168.05 Aligned_cols=219 Identities=16% Similarity=0.085 Sum_probs=145.1
Q ss_pred cCCeeecCCCCC--cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~~--~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+.|+|..++++. |+.+ ++.. ..+|+.. . .. ++++.+++++|++++++++++|+++++..
T Consensus 30 ~~i~l~~~~~~~~~~~~v------a~~~--~~~Y~~~------~-~~----~lr~~la~~~~~~~~~v~~~~G~~~ai~~ 90 (356)
T 1fg7_A 30 GDVWLNANEYPTAVEFQL------TQQT--LNRYPEC------Q-PK----AVIENYAQYAGVKPEQVLVSRGADEGIEL 90 (356)
T ss_dssp CSEECSSCCCSSCCCCCC------CCCC--TTSCCCS------S-CH----HHHHHHHHHHTSCGGGEEEESHHHHHHHH
T ss_pred ceEEeeCCCCCCCCCHhH------hhhh--hccCCCc------c-HH----HHHHHHHHHhCCChHHEEEcCCHHHHHHH
Confidence 468999999864 4444 1211 1133322 1 23 35588888889988888889999999998
Q ss_pred HHHhhcCCC-CeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 125 VYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 125 ~l~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
++.+++++| |+|+++.++|.++.. .+...|.++..+ +.+ +++.+|+++++++++ ++++|+++ ++|
T Consensus 91 ~~~~~~~~g~d~Vl~~~p~~~~~~~--------~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~--~~~~v~l~~p~n 157 (356)
T 1fg7_A 91 LIRAFCEPGKDAILYCPPTYGMYSV--------SAETIGVECRTV--PTL-DNWQLDLQGISDKLD--GVKVVYVCSPNN 157 (356)
T ss_dssp HHHHHCCTTTCEEEECSSSCTHHHH--------HHHHHTCEEEEC--CCC-TTSCCCHHHHHTSCT--TEEEEEEESSCT
T ss_pred HHHHHhCCCCCEEEEeCCChHHHHH--------HHHHcCCEEEEe--eCC-CCCCCCHHHHHHHhc--CCCEEEEeCCCC
Confidence 999999999 999999977765432 344556666444 554 446789999998886 68999888 777
Q ss_pred -CCCcccHHHHH---HHHHHcCCEEEEeccchhhhcccCCCCC-CCCCccEEEeCCCCcCC--CCCceEEEEecCcchhc
Q 018401 203 -YARLYDYERIR---KVCNKQKAIMLADMAHISGLVAAGVIPS-PFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEIN 275 (356)
Q Consensus 203 -~g~~~~l~~I~---~la~~~g~~vivD~a~~~g~~~~~~~~~-~l~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~ 275 (356)
+|.+.+.++|. ++|+ +|+++|+|++|+.......+... ...+.++++.|++|+++ |.+.|++++++
T Consensus 158 ptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------ 230 (356)
T 1fg7_A 158 PTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE------ 230 (356)
T ss_dssp TTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH------
T ss_pred CCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCH------
Confidence 89888766555 5555 89999999999744311111111 11136799999999874 22339998876
Q ss_pred cCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 276 KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
++.+.+.....+ + +.+.+..++..++++.
T Consensus 231 --------~~~~~l~~~~~~--~-~~~~~~~~a~~~~l~~ 259 (356)
T 1fg7_A 231 --------EVINLLMKVIAP--Y-PLSTPVADIAAQALSP 259 (356)
T ss_dssp --------HHHHHHHHHSCS--S-CSCHHHHHHHHHHTSH
T ss_pred --------HHHHHHHHhcCC--C-CCCHHHHHHHHHHhcC
Confidence 455544432211 1 4566666666666643
No 143
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.79 E-value=9.4e-19 Score=168.52 Aligned_cols=212 Identities=11% Similarity=-0.004 Sum_probs=140.4
Q ss_pred CCeeecCCCCC-cHHHHHHHHhhhhccCC--CCCCC---CccCCCchhHHHHHHHHHHHHHHHcC----CCCCccccCCC
Q 018401 48 GLELIPSENFT-SVSVMQAVGSVMTNKYS--EGYPG---ARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGGSLS 117 (356)
Q Consensus 48 ~i~L~~~~~~~-~~~V~~a~~~~l~~~~~--~~~~~---~~~~~~~~~~~~l~~~~~~~la~~~g----~~~~~v~v~~s 117 (356)
.|+|...+++. .+.+.+++.+....... .|... ...|+...+..++++++.+++.+..+ ++++++++++|
T Consensus 40 ~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~g 119 (435)
T 3piu_A 40 IIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAG 119 (435)
T ss_dssp BEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEH
T ss_pred eEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCC
Confidence 56888888875 45566666554332100 00000 01233334456788777777766555 56778888999
Q ss_pred chHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccccc-ccceeeEEEecccCCCCCCCCHHHHHHHhhhc-----
Q 018401 118 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLNESTGYIDYDQLEKSATLF----- 191 (356)
Q Consensus 118 gs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~----- 191 (356)
|++++..++.+++++||.|+++.+.|.++.. .+. ..|.++..++++.+ .++.+|+++|++++.+.
T Consensus 120 g~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~ 190 (435)
T 3piu_A 120 ATSANETFIFCLADPGEAVLIPTPYYPGFDR--------DLKWRTGVEIVPIHCTSS-NGFQITETALEEAYQEAEKRNL 190 (435)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HTTTTTCCEEEEEECCGG-GTSCCCHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHhcCCCCeEEECCCccccHHH--------HHHHhcCCEEEEeeCCCc-cCCcCCHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999988876543 222 35666655543321 23568999999998752
Q ss_pred CCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCC---------------CCccEEEe
Q 018401 192 RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---------------EYADVVTT 251 (356)
Q Consensus 192 ~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l---------------~~~D~~~~ 251 (356)
++++|+++ ++| +|.+.+ +++|.++|++||+++|+|++|+.+....... ..+ ...++++.
T Consensus 191 ~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~i~i~ 269 (435)
T 3piu_A 191 RVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSF-ISVMEVLKDRNCDENSEVWQRVHVVY 269 (435)
T ss_dssp CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCC-CCHHHHHHC-------CGGGGEEEEE
T ss_pred CeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC-cCHHHhccccccccccCCCCCEEEEE
Confidence 67888887 777 887765 5788888999999999999997643321110 000 01238899
Q ss_pred CCCCcCC--CCCceEEEEec
Q 018401 252 TTHKSLR--GPRGAMIFFRK 269 (356)
Q Consensus 252 s~~K~l~--gp~gG~l~~~~ 269 (356)
|+||+++ |.+.|++++++
T Consensus 270 s~sK~~g~~G~r~G~~~~~~ 289 (435)
T 3piu_A 270 SLSKDLGLPGFRVGAIYSND 289 (435)
T ss_dssp ESSSSSCCGGGCEEEEEESC
T ss_pred eeecccCCCceeEEEEEeCC
Confidence 9999884 23338888854
No 144
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.79 E-value=5.7e-19 Score=168.03 Aligned_cols=231 Identities=16% Similarity=0.091 Sum_probs=149.6
Q ss_pred CeeecCCC-C--CcHHHHHHHHhhhhccCCCCCCC-CccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 49 LELIPSEN-F--TSVSVMQAVGSVMTNKYSEGYPG-ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 49 i~L~~~~~-~--~~~~V~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
+++..+++ . .+|.|++++.+.+.... .+... ...|+..... .++++.+++++|.+ ++++++ +|+.++..
T Consensus 49 i~~~~~~~~~~~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~----~~l~~~la~~~~~~-~~i~~~-sG~~a~~~ 121 (401)
T 2bwn_A 49 TVWCGNDYLGMGQHPVVLAAMHEALEAVG-AGSGGTRNISGTTAYH----RRLEAEIAGLHQKE-AALVFS-SAYNANDA 121 (401)
T ss_dssp EECSCSCTTSGGGCHHHHHHHHHHHHHHC-SCCCSBTTTBCCBHHH----HHHHHHHHHHTTCS-EEEEES-CHHHHHHH
T ss_pred EEeeCCCcccCCCCHHHHHHHHHHHHHcC-CCCCCcCcccCChHHH----HHHHHHHHHHhCCC-cEEEEC-CcHHHHHH
Confidence 55555544 2 46789999999886521 11111 1112222233 35668899999974 445554 55557776
Q ss_pred HHHhh--cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh---cCCcEEEEc
Q 018401 125 VYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAG 199 (356)
Q Consensus 125 ~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~---~~~k~v~l~ 199 (356)
++..+ +.+||+|+++.++|+++..+ +...|.+++.+ +.+ |++++++.+.. .++++|+++
T Consensus 122 ~~~~l~~~~~gd~Vl~~~~~~~~~~~~--------~~~~g~~~~~v--~~~------d~~~le~~l~~~~~~~~~~v~~~ 185 (401)
T 2bwn_A 122 TLSTLRVLFPGLIIYSDSLNHASMIEG--------IKRNAGPKRIF--RHN------DVAHLRELIAADDPAAPKLIAFE 185 (401)
T ss_dssp HHHHHHHHSTTCEEEEETTCCHHHHHH--------HHHSCCCEEEE--CTT------CHHHHHHHHHHSCTTSCEEEEEE
T ss_pred HHHHHhcCCCCCEEEECchhhHHHHHH--------HHHcCCeEEEE--cCC------CHHHHHHHHHhhccCCceEEEEe
Confidence 66665 36999999999888776542 23456556555 332 78889888862 278898887
Q ss_pred -CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcc-cCCC---CCCC-CCccEEEeCCCCcCCCCCceEEEEecCcc
Q 018401 200 -ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA-AGVI---PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVK 272 (356)
Q Consensus 200 -~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~-~~~~---~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~ 272 (356)
++| +|.+.|+++|.++|++||+++|+|++|+.|... .+.. ..++ ...|+++.|++|++++ .||+++.++
T Consensus 186 ~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~-~GG~~~~~~--- 261 (401)
T 2bwn_A 186 SVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGV-FGGYIAASA--- 261 (401)
T ss_dssp SBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCS-CCEEEEECH---
T ss_pred cCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccC-CCCEEecCH---
Confidence 666 899999999999999999999999999976542 1110 0111 1358999999998865 458887765
Q ss_pred hhccCCcchhhhHHHhhccccC--CCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 273 EINKQGKEVFYDYEEKINQAVF--PGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~--~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++.+.+..... ....++++ ...+++.++++++.+
T Consensus 262 -----------~~~~~l~~~~~~~~~~~~~~~-~~~~a~~~al~~~~~ 297 (401)
T 2bwn_A 262 -----------RMVDAVRSYAPGFIFSTSLPP-AIAAGAQASIAFLKT 297 (401)
T ss_dssp -----------HHHHHHHHHCHHHHTSBCCCH-HHHHHHHHHHHHHTS
T ss_pred -----------HHHHHHHHhCcCceecCCCCH-HHHHHHHHHHHHHHh
Confidence 34443322110 11234555 777888889988865
No 145
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.79 E-value=2e-18 Score=165.16 Aligned_cols=223 Identities=11% Similarity=0.037 Sum_probs=145.1
Q ss_pred ccccChHHHHHHHHHHHHH-----HcCCeeecCC-------CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHH
Q 018401 27 LEVVDPEIADIIEHEKARQ-----WKGLELIPSE-------NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 94 (356)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~-----~~~i~L~~~~-------~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 94 (356)
....+..++.......+.. .+.|+|..++ .++++.|.+++.+...... .+| +...+..+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~lr 86 (418)
T 3rq1_A 14 GKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEH-VGY------APIAGIPDFL 86 (418)
T ss_dssp TCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHH-HSC------CCTTCCHHHH
T ss_pred CCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccccc-CCC------CCCCChHHHH
Confidence 3455666777666543332 2568888774 2468889888876543211 122 2223456777
Q ss_pred HHHHHHHHHHcCCC-CCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 95 SLCQKRALEAFRLD-PEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 95 ~~~~~~la~~~g~~-~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
+++.+++....+.+ ++++++++||++++..++.++++|||+|+++.+.|.++. ..+...|.+++.+ +.+
T Consensus 87 ~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~--------~~~~~~g~~~~~v--~~~ 156 (418)
T 3rq1_A 87 CAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYR--------VICSDTGRTLVTY--SLF 156 (418)
T ss_dssp HHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHH--------HHHHHTTCEEEEE--CSB
T ss_pred HHHHHHHhcccCccccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHH--------HHHHHcCCEEEEE--eee
Confidence 77777776666543 226777999999999999999999999999996665443 2455667666555 454
Q ss_pred CCCCCCCHHHHHHHhhhc---CCc-EEEEc-C-CC-CCCcccHHHH---HHHHH------HcCCEEEEeccchhhhcc--
Q 018401 174 ESTGYIDYDQLEKSATLF---RPK-LIVAG-A-SA-YARLYDYERI---RKVCN------KQKAIMLADMAHISGLVA-- 235 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~~~---~~k-~v~l~-~-~n-~g~~~~l~~I---~~la~------~~g~~vivD~a~~~g~~~-- 235 (356)
.+++.+|+++|++++++. +++ +++++ + +| +|.+.+.+++ +++|+ +||+++|+|++|......
T Consensus 157 ~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~ 236 (418)
T 3rq1_A 157 DEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKD 236 (418)
T ss_dssp CTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHH
T ss_pred CCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChH
Confidence 344689999999998752 566 67776 7 67 8988876555 45555 899999999998421110
Q ss_pred --cCC-CC-CCCCCcc---EEEeCCCCcCCCC--CceEEEE
Q 018401 236 --AGV-IP-SPFEYAD---VVTTTTHKSLRGP--RGAMIFF 267 (356)
Q Consensus 236 --~~~-~~-~~l~~~D---~~~~s~~K~l~gp--~gG~l~~ 267 (356)
..+ .. ..+ ..| +++.|++|+++.| +.|+++.
T Consensus 237 ~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~ 276 (418)
T 3rq1_A 237 EVRAFFNKFSHL-PKEILTCVCYSLSKGFTMYGQRVGAMIG 276 (418)
T ss_dssp HHHGGGGGGTTC-CTTEEEEEEEESTTTTTCCSSCCEEEEE
T ss_pred HHHHHHHHHHhc-CCCceEEEEEeCCCCCcCcCCcceEEEE
Confidence 000 00 000 023 7888999987433 3388887
No 146
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.79 E-value=5.5e-19 Score=169.95 Aligned_cols=230 Identities=11% Similarity=0.035 Sum_probs=146.0
Q ss_pred hcccccccCh-HHHHHHHHHHHHH------HcCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHH
Q 018401 23 LNAPLEVVDP-EIADIIEHEKARQ------WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (356)
Q Consensus 23 ~~~~~~~~~~-~~~~~~~~~~~~~------~~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 93 (356)
+++.+..+.+ +.|..+.+..... ++.|+|..++. +.|+.|++++.+.+.... .. .+...|+...+..++
T Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~-~~~~~y~~~~g~~~l 103 (432)
T 3ei9_A 26 RNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELS-TI-EGYSGYGAEQGAKPL 103 (432)
T ss_dssp CCHHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTT-ST-TTCCCCCCTTCCHHH
T ss_pred cChHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCCCCCCHHHHHHHHHHHhccc-cc-CCccCCCCCCCCHHH
Confidence 3444555555 3555443332211 14688887765 368999999999887421 10 111123333456778
Q ss_pred HHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccc-----------
Q 018401 94 ESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS----------- 162 (356)
Q Consensus 94 ~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g----------- 162 (356)
++++.+++.+.++++++++++++|+++++.. +.+++++||.|+++.+.|.++.... ...|
T Consensus 104 ~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~~--------~~~g~~~~~~~~~~~ 174 (432)
T 3ei9_A 104 RAAIAKTFYGGLGIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSS--------VIMGQTGQFNTDVQK 174 (432)
T ss_dssp HHHHHHHHHTTTTCCGGGEEEESCHHHHHHH-HHHHHCTTCCEEEEESCCTHHHHHH--------HHHTCSCCEETTTTE
T ss_pred HHHHHHHHHccCCCCcceEEECCChHHHHHH-HHHHcCCCCEEEEeCCCCHHHHHHH--------HHcCCcccccccccc
Confidence 8777777776667888888889899888874 6788899999999998887765322 1222
Q ss_pred -eeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc
Q 018401 163 -IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA 236 (356)
Q Consensus 163 -~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~ 236 (356)
..+..++++.. .+...|++. .+ ++++|+++ ++| +|.+.+ +++|+++|++||+++|+|++|+......
T Consensus 175 ~~~~~~~~~~~~-~~~~~~l~~-----~~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~ 247 (432)
T 3ei9_A 175 YGNIEYMRCTPE-NGFFPDLST-----VG-RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDD 247 (432)
T ss_dssp ETTCEEEECCGG-GTTSCCGGG-----CC-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSS
T ss_pred cCceEEeccCcc-cCCcCChhh-----CC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCC
Confidence 13444433221 223445432 23 78999887 877 887765 6677777999999999999997543321
Q ss_pred ---CCCCCC-CCCccEEEeCCCCcCC--CCCceEEEEecC
Q 018401 237 ---GVIPSP-FEYADVVTTTTHKSLR--GPRGAMIFFRKG 270 (356)
Q Consensus 237 ---~~~~~~-l~~~D~~~~s~~K~l~--gp~gG~l~~~~~ 270 (356)
.+.... ..+.++++.|++|+++ |.+.|+++++++
T Consensus 248 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~ 287 (432)
T 3ei9_A 248 NPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKK 287 (432)
T ss_dssp CCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTT
T ss_pred CCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChH
Confidence 111111 1135699999999874 333399998875
No 147
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.79 E-value=1.6e-19 Score=182.14 Aligned_cols=197 Identities=16% Similarity=0.071 Sum_probs=139.8
Q ss_pred HHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 96 LCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 96 ~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
++++.+|++||++.. +++++|++.+|.++++++++|||+|+++.+.|.++.. ++.+.|+.++.++... +
T Consensus 199 eaE~~lA~~fGa~~a-~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~--------~l~lsGa~pv~v~~~~--~ 267 (715)
T 3n75_A 199 EAEQYIARVFNADRS-YMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTH--------LMMMSDVTPIYFRPTR--N 267 (715)
T ss_dssp HHHHHHHHHHTCSEE-EEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHSCCEEEEECCCB--C
T ss_pred HHHHHHHHHhCCCCc-eEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHH--------HHHHcCCEEEEEeccc--c
Confidence 456899999999764 3336666799998999999999999999998888765 4556777665554322 2
Q ss_pred CCC----C-----CHHHHHHHhhhc-CCc---EEEEc-CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCC-C-
Q 018401 176 TGY----I-----DYDQLEKSATLF-RPK---LIVAG-ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV-I- 239 (356)
Q Consensus 176 ~~~----~-----d~~~l~~~i~~~-~~k---~v~l~-~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~-~- 239 (356)
.+. + |+++|+++++++ ++| +++++ ++.+|.+.|+++|.++|++++ +++|+||+.+...... .
T Consensus 268 ~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~~ 345 (715)
T 3n75_A 268 AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEG 345 (715)
T ss_dssp TTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGTT
T ss_pred ccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcCc--EEEccccccccccCCcccc
Confidence 222 3 899999999862 344 77777 633899999999999998764 7999999877522111 1
Q ss_pred CCCCC---CccEE---EeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHH
Q 018401 240 PSPFE---YADVV---TTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVA 312 (356)
Q Consensus 240 ~~~l~---~~D~~---~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~A 312 (356)
...+. ++|++ ++|+||+|+|+.+ |++.++++.. ...++........++|+++.++|+.+|
T Consensus 346 ~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~-------------~~~~~~~~~~~~STSpsy~~~AsldaA 412 (715)
T 3n75_A 346 KCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVN-------------EETFNEAYMMHTTTSPHYGIVASTETA 412 (715)
T ss_dssp SSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCC-------------HHHHHHHHHHTSCSSCCHHHHHHHHHH
T ss_pred ccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhh-------------HHHHHHHHHhhcCCCchHHHHHHHHHH
Confidence 12222 26765 9999999999855 8888887421 112222111122478999999999999
Q ss_pred HHHHhc
Q 018401 313 LKQVCT 318 (356)
Q Consensus 313 l~~~~~ 318 (356)
++++.+
T Consensus 413 ~~~~~~ 418 (715)
T 3n75_A 413 AAMMKG 418 (715)
T ss_dssp HHHHSH
T ss_pred HHHHHh
Confidence 999874
No 148
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.79 E-value=3.3e-19 Score=170.81 Aligned_cols=158 Identities=12% Similarity=0.021 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 94 ESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 94 ~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
.+++++.+++++|++. .++++||++++..++.+++++||+|+++.++|++...++.. .....|+++..+ +.+
T Consensus 84 ~~~le~~lA~l~g~~~--~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~----~l~~~G~~v~~v--~~~ 155 (415)
T 2fq6_A 84 HFSLQQAMCELEGGAG--CVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSK----ILSKLGVTTSWF--DPL 155 (415)
T ss_dssp HHHHHHHHHHHHTCSE--EEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHH----TGGGGTCEEEEE--CTT
T ss_pred HHHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHH----HHHHcCcEEEEE--CCC
Confidence 3456688999999863 35578889999989999999999999999888876543321 122346555444 322
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHH--cCCEEEEeccchhhhcccCCCCCCCCCccEE
Q 018401 174 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFEYADVV 249 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~--~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~ 249 (356)
|+++|++++++ +|++|+++ ++| +|.+.|+++|+++|++ +|+++|+|++|+.+.....+ .. ++|++
T Consensus 156 ------d~~~le~ai~~-~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~-~~---g~Div 224 (415)
T 2fq6_A 156 ------IGADIVKHLQP-NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKAL-DF---GIDVS 224 (415)
T ss_dssp ------CGGGGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGG-GG---TCSEE
T ss_pred ------CHHHHHHhhcc-CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCcc-cc---CCeEE
Confidence 78899999987 89999987 777 8999999999999999 99999999999866321111 12 48999
Q ss_pred EeCCCCcCCCCC---ceEEEEecC
Q 018401 250 TTTTHKSLRGPR---GAMIFFRKG 270 (356)
Q Consensus 250 ~~s~~K~l~gp~---gG~l~~~~~ 270 (356)
++|+||+++++. +|+++.+++
T Consensus 225 ~~S~sK~lg~~g~~~~G~l~~~~~ 248 (415)
T 2fq6_A 225 IQAATKYLVGHSDAMIGTAVCNAR 248 (415)
T ss_dssp EEETTTTTTCSSSCCCEEEEECTT
T ss_pred EEeCccccCCCCCceEEEEEeCHH
Confidence 999999998765 588888774
No 149
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.79 E-value=8.1e-19 Score=169.36 Aligned_cols=158 Identities=16% Similarity=0.098 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEeccc
Q 018401 93 AESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 172 (356)
Q Consensus 93 l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 172 (356)
..+++++++++++|++ + .+++++|++++..++.+++++||+|+++.+.|+++...+. ..+...|.++..+ +.
T Consensus 115 ~~~~l~~~lA~l~g~~-~-~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G~~v~~v--~~ 186 (445)
T 1qgn_A 115 TTVVLEEKISALEGAE-S-TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIE----TILPKMGITATVI--DP 186 (445)
T ss_dssp HHHHHHHHHHHHHTCS-E-EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHH----HTGGGGTCEEEEE--CS
T ss_pred HHHHHHHHHHHHhCCC-c-EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH----HHHHHcCCEEEEe--CC
Confidence 3445668999999986 3 3456677799998999999999999999988876543211 0122346555544 33
Q ss_pred CCCCCCCCHHHHHHHhhhcCC-cEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEE
Q 018401 173 NESTGYIDYDQLEKSATLFRP-KLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVV 249 (356)
Q Consensus 173 ~~~~~~~d~~~l~~~i~~~~~-k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~ 249 (356)
+ |+++|++++++ ++ ++|+++ ++| +|.+.|+++|+++|+++|+++|+|++|+.+... ..... ++|++
T Consensus 187 ~------d~~~l~~ai~~-~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~-~~~~~---g~Div 255 (445)
T 1qgn_A 187 A------DVGALELALNQ-KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQ-KALAL---GADLV 255 (445)
T ss_dssp S------CHHHHHHHHHH-SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-CTTTT---TCSEE
T ss_pred C------CHHHHHHHhcc-CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-Ccccc---CCEEE
Confidence 2 89999999987 88 999998 777 899999999999999999999999999876532 11122 48999
Q ss_pred EeCCCCcCCCCC---ceEEEEec
Q 018401 250 TTTTHKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 250 ~~s~~K~l~gp~---gG~l~~~~ 269 (356)
+.|+||+++|+. +|+++.++
T Consensus 256 ~~S~sK~~gg~gd~~~G~l~~~~ 278 (445)
T 1qgn_A 256 LHSATKFLGGHNDVLAGCISGPL 278 (445)
T ss_dssp EECTTTTTTCSSSCCCEEEEECH
T ss_pred EECCcccccccccceEEEEEECH
Confidence 999999988765 69998877
No 150
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.78 E-value=7.6e-18 Score=161.87 Aligned_cols=248 Identities=11% Similarity=-0.010 Sum_probs=154.1
Q ss_pred cCCeeecCCC--C---CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSEN--F---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~--~---~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..+++.++.. + .+|+|++++.+.+.... .++... | ......++++.+++++++++++++|++||+++
T Consensus 44 ~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~--~~~~~~-~-----~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea 115 (429)
T 1s0a_A 44 RLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMS--HVMFGG-I-----THAPAIELCRKLVAMTPQPLECVFLADSGSVA 115 (429)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCS--CCCCSS-E-----ECHHHHHHHHHHHHHSCTTCCEEEEESSHHHH
T ss_pred EEEEcCccHhhccCCCCCHHHHHHHHHHHHhcc--cccccc-c-----CCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHH
Confidence 3566665552 2 58999999999886522 111111 1 11233456688999999888888889999999
Q ss_pred HHHHHHhhc---C----CCCeeeecCCCCCcccCccccc------ccccccccceeeEEEecccC---CCCCCCCHHHHH
Q 018401 122 NFQVYTALL---K----PHDRIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLN---ESTGYIDYDQLE 185 (356)
Q Consensus 122 ~~~~l~al~---~----~gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~v~~~~~---~~~~~~d~~~l~ 185 (356)
+..++.++. + |||+|++.++.|++........ ++.........+..++++.. ...+.+|+++|+
T Consensus 116 ~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 195 (429)
T 1s0a_A 116 VEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFA 195 (429)
T ss_dssp HHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHH
T ss_pred HHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHH
Confidence 998887643 2 6999999987765432211100 00000000012334543321 011258999999
Q ss_pred HHhhh--cCCcEEEEcCC--C-CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCC
Q 018401 186 KSATL--FRPKLIVAGAS--A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTT 253 (356)
Q Consensus 186 ~~i~~--~~~k~v~l~~~--n-~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~ 253 (356)
+++++ .++++|+++++ | +|...+ +++|.++|++||+++|+|++|+ +|..... ....+ ...|++++|
T Consensus 196 ~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~-~~~d~~t~s- 273 (429)
T 1s0a_A 196 RLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAE-IAPDILCLG- 273 (429)
T ss_dssp HHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSEEEEC-
T ss_pred HHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcC-CCCCEEEec-
Confidence 99874 25677777765 5 787776 9999999999999999999996 4422110 11011 136888766
Q ss_pred CCcCCCC-Cc-eEEEEecCcchhccCCcchhhhHHHhhcccc----CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 254 HKSLRGP-RG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAV----FPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 254 ~K~l~gp-~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
|+|+|+ .+ |++++++ ++.+.+.... ......+.|.++.++..++++.+.++
T Consensus 274 -K~l~~G~~~iG~~~~~~--------------~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~ 330 (429)
T 1s0a_A 274 -KALTGGTMTLSATLTTR--------------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESG 330 (429)
T ss_dssp -GGGGTSSSCCEEEEECH--------------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTC
T ss_pred -ccccCCCccceEEEeCH--------------HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 998875 45 9998877 4444443310 01112345778888888999988664
No 151
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.78 E-value=1.2e-18 Score=167.22 Aligned_cols=191 Identities=14% Similarity=0.173 Sum_probs=138.4
Q ss_pred eeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHH
Q 018401 50 ELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYT 127 (356)
Q Consensus 50 ~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~ 127 (356)
+|..++++ +|+.+++++.+.+... .|+. ...... ++++.+++++|.+ ++++++||++++..++.
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~~~---~y~~-----~~~~~~----~l~~~la~~~~~~--~v~~~~ggt~al~~~l~ 85 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALDSQ---WLSN-----GGPLVR----EFEERVAGLAGVR--HAVATCNATAGLQLLAH 85 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHHHT---CCSS-----SCHHHH----HHHHHHHHHHTSS--EEEEESCHHHHHHHHHH
T ss_pred cccccCCCCCChHHHHHHHHHHHhcC---Cccc-----CCHHHH----HHHHHHHHHhCCC--eEEEeCCHHHHHHHHHH
Confidence 46656654 4678999998887642 1221 023344 4557888888874 56779999999998888
Q ss_pred hhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCcc
Q 018401 128 ALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 207 (356)
Q Consensus 128 al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~ 207 (356)
++. +||+|++++++|.++.. .+...|.+++.+ +++++++.+|+++|++++++ ++++|+++. .+|...
T Consensus 86 ~l~-~gd~Vlv~~~~~~~~~~--------~~~~~G~~~~~v--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~tG~~~ 152 (424)
T 2po3_A 86 AAG-LTGEVIMPSMTFAATPH--------ALRWIGLTPVFA--DIDPDTGNLDPDQVAAAVTP-RTSAVVGVH-LWGRPC 152 (424)
T ss_dssp HHT-CCSEEEEESSSCTHHHH--------HHHHTTCEEEEE--CBCTTTSSBCHHHHGGGCCT-TEEEEEEEC-GGGCCC
T ss_pred HcC-CCCEEEECCCccHHHHH--------HHHHcCCEEEEE--ecCCCcCCcCHHHHHHhhCc-CCcEEEEEC-CCCCcC
Confidence 874 79999999988876643 334557666555 55534578999999999876 789888853 378889
Q ss_pred cHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCC--CcCCCCCceEEEEec
Q 018401 208 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFRK 269 (356)
Q Consensus 208 ~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~--K~l~gp~gG~l~~~~ 269 (356)
++++|.++|+++|+++|+|++|+.|....+ ...+ ...|++++|+| |+++|+++|+++.++
T Consensus 153 ~l~~i~~la~~~~~~li~Dea~~~g~~~~~-~~~~-~~~di~~~S~sk~K~l~~~~~G~~v~~~ 214 (424)
T 2po3_A 153 AADQLRKVADEHGLRLYFDAAHALGCAVDG-RPAG-SLGDAEVFSFHATKAVNAFEGGAVVTDD 214 (424)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTCTTCEETT-EETT-SSSSEEEEECCTTSSSCCSSCEEEEESC
T ss_pred CHHHHHHHHHHcCCEEEEECccccCCeECC-eecc-cccCEEEEeCCCCCCccCCCCeEEEeCC
Confidence 999999999999999999999987765321 1111 12478888877 888887779888873
No 152
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.78 E-value=2e-18 Score=163.93 Aligned_cols=236 Identities=11% Similarity=0.056 Sum_probs=150.9
Q ss_pred cCCeeecCC-----CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~-----~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..+++..+. .++++.+++++.+.+.... .... .|. ....+++++++++++|++++++++++||+++
T Consensus 46 ~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~---~~~~-~~~-----~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a 116 (395)
T 1vef_A 46 EYIDCVGGYGVANLGHGNPEVVEAVKRQAETLM---AMPQ-TLP-----TPMRGEFYRTLTAILPPELNRVFPVNSGTEA 116 (395)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCC---CCCT-TSC-----CHHHHHHHHHHHHTSCTTEEEEEEESSHHHH
T ss_pred EEEEccCccccccCCCCCHHHHHHHHHHHHhCC---CCcc-ccC-----CHHHHHHHHHHHHhcCCCcCEEEEcCcHHHH
Confidence 346665442 2478999999999887521 1111 121 2344567799999998877788889999999
Q ss_pred HHHHHHhhc--CCCCeeeecCCCCCcccCcccccccccccccceeeE---EEecccCC-CCCCCCHHHHHHHhhhcCCcE
Q 018401 122 NFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE---TMPYRLNE-STGYIDYDQLEKSATLFRPKL 195 (356)
Q Consensus 122 ~~~~l~al~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~v~~~~~~-~~~~~d~~~l~~~i~~~~~k~ 195 (356)
+..++.++. .+||+|++++++|.+...... ...|.... .+|+..+. .-...|+++|++++++ ++++
T Consensus 117 ~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~-------~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~-~~~~ 188 (395)
T 1vef_A 117 NEAALKFARAHTGRKKFVAAMRGFSGRTMGSL-------SVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDE-ETAA 188 (395)
T ss_dssp HHHHHHHHHHHHSCCEEEEETTCCCCSSHHHH-------HTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCT-TEEE
T ss_pred HHHHHHHHHHHhCCCeEEEEcCCcCCCchhhh-------hhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhcc-CEEE
Confidence 998887763 688999998877654332111 11121100 00100000 0002489999999986 7899
Q ss_pred EEEcCC-C-CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCCC-C---CCCCCccEEEeCCCCcCCCCCc-eE
Q 018401 196 IVAGAS-A-YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI-P---SPFEYADVVTTTTHKSLRGPRG-AM 264 (356)
Q Consensus 196 v~l~~~-n-~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~~-~---~~l~~~D~~~~s~~K~l~gp~g-G~ 264 (356)
|+++++ | +|.+.+ +++|.++|++||+++|+|++|+ |....+.. . .+ ..+|++++ ||+++++.+ |+
T Consensus 189 v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~~g~~~~~~~~~-~~~d~~s~--sK~~~~g~~~G~ 264 (395)
T 1vef_A 189 VILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-GMGRTGKRFAFEHFG-IVPDILTL--AKALGGGVPLGV 264 (395)
T ss_dssp EEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHT-CCCSEEEE--CGGGGTTSSCEE
T ss_pred EEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCCchhHhhhcC-CCCCEEEE--cccccCCCceEE
Confidence 988743 3 788877 9999999999999999999997 42211110 0 01 13687754 799977655 99
Q ss_pred EEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 265 IFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 265 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
+++++ ++.+.+..... ....+++.+..+++.++++.+.+
T Consensus 265 ~~~~~--------------~~~~~l~~~~~-~~~~~~~~~~~~a~~~al~~~~~ 303 (395)
T 1vef_A 265 AVMRE--------------EVARSMPKGGH-GTTFGGNPLAMAAGVAAIRYLER 303 (395)
T ss_dssp EEEEH--------------HHHHTSCTTSS-CCSSTTCHHHHHHHHHHHHHHHH
T ss_pred EEehH--------------HHHhhhccCCc-CCCcCCCHHHHHHHHHHHHHHHh
Confidence 99887 45554433111 11235677778888888988764
No 153
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.78 E-value=2.6e-18 Score=164.52 Aligned_cols=157 Identities=13% Similarity=0.101 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 94 ESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 94 ~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
.+++++++++++|.+ ++++++||++++..++.+++++||+|+++.++|.++..++.. .+...|.+++.+ +.
T Consensus 58 ~~~l~~~la~~~g~~--~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~----~~~~~g~~~~~~--~~- 128 (412)
T 2cb1_A 58 AKALEERLKALEGAL--EAVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQ----VLSLMGVTVRYV--DP- 128 (412)
T ss_dssp HHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHH----TTTTTTCEEEEE--CS-
T ss_pred HHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHH----HHHHcCCEEEEE--CC-
Confidence 345668999999986 566799999999999999999999999999988766543321 122345555444 22
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEe
Q 018401 174 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 251 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~ 251 (356)
|+++|++++++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+......... ++|++++
T Consensus 129 ------~~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~---~~di~~~ 198 (412)
T 2cb1_A 129 ------EPEAVREALSA-KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAW---GAHVVVE 198 (412)
T ss_dssp ------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGG---TCSEEEE
T ss_pred ------CHHHHHHHhcc-CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCcccc---CCeEEEE
Confidence 38999999987 89999987 777 899999999999999999999999999877222111112 4899999
Q ss_pred CCCCcCCCCCc--eEEEEec
Q 018401 252 TTHKSLRGPRG--AMIFFRK 269 (356)
Q Consensus 252 s~~K~l~gp~g--G~l~~~~ 269 (356)
|+||++++|.+ |++++.+
T Consensus 199 S~~K~~~~~~~~~G~~~~~~ 218 (412)
T 2cb1_A 199 SLTKWASGHGSVLGGAVLSR 218 (412)
T ss_dssp ETTTTTTCSSCCCCEEEEEC
T ss_pred CCcccccCCCCcEEEEEEec
Confidence 99999988765 5555544
No 154
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.78 E-value=9.5e-19 Score=167.77 Aligned_cols=228 Identities=12% Similarity=0.064 Sum_probs=150.4
Q ss_pred cccccccChHHHHHHHHHHHHH--HcCCeeecC---CC----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHH
Q 018401 24 NAPLEVVDPEIADIIEHEKARQ--WKGLELIPS---EN----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 94 (356)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~--~~~i~L~~~---~~----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 94 (356)
.+++..++++....+....+.. ++.|+|..+ ++ ++++.|++++.+.+......+|+ ...+..+++
T Consensus 25 ~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~lr 98 (420)
T 4f4e_A 25 FSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYL------PIDGIAAYD 98 (420)
T ss_dssp TTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCC------CTTCCHHHH
T ss_pred hhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCC------CCCCcHHHH
Confidence 3566666666544444433332 367899877 22 23489999999988752222332 334456777
Q ss_pred HHHHHHHHHHcCC--CCC--ccccCCCchHHHHHH--HHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEE
Q 018401 95 SLCQKRALEAFRL--DPE--KWGGSLSGSPSNFQV--YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 168 (356)
Q Consensus 95 ~~~~~~la~~~g~--~~~--~v~v~~sgs~a~~~~--l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 168 (356)
+++.+++....+. +++ ++++|+||++++..+ +.++++|||+|+++++.|.++. ..+...|.+++.+
T Consensus 99 ~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~--------~~~~~~g~~~~~v 170 (420)
T 4f4e_A 99 ASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHR--------ALFDMAGFEVVAY 170 (420)
T ss_dssp HHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHH--------HHHHHTTCCEEEE
T ss_pred HHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHH--------HHHHHcCCeEEEe
Confidence 6776766554442 456 677799999999877 4566899999999996665443 2455667777666
Q ss_pred ecccCCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccC----
Q 018401 169 PYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG---- 237 (356)
Q Consensus 169 ~~~~~~~~~~~d~~~l~~~i~~--~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~---- 237 (356)
++. +.+++.+|+++|++.+++ .++++++++ ++| +|...+ +++|+++|+++|+++|+|++++......+
T Consensus 171 ~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~ 249 (420)
T 4f4e_A 171 PYY-DAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAA 249 (420)
T ss_dssp ECE-ETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGH
T ss_pred eee-ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhH
Confidence 542 224578999999999973 267888887 777 886654 66888999999999999999753222100
Q ss_pred -CCCC-CCCCccEEEeCCCCcCCCCCc---eEEEE
Q 018401 238 -VIPS-PFEYADVVTTTTHKSLRGPRG---AMIFF 267 (356)
Q Consensus 238 -~~~~-~l~~~D~~~~s~~K~l~gp~g---G~l~~ 267 (356)
+... ...+.++++.|++|+++ +.| |+++.
T Consensus 250 ~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~ 283 (420)
T 4f4e_A 250 AVRLFAAANLNVFVSSSFSKSFS-LYGERVGALSI 283 (420)
T ss_dssp HHHHHHHTTCCEEEEEECTTTTT-CGGGCEEEEEE
T ss_pred HHHHHHhcCCCEEEEEeCCccCc-CcCCCcEEEEE
Confidence 0000 01125689999999874 334 88764
No 155
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.65 E-value=1.2e-20 Score=179.21 Aligned_cols=237 Identities=14% Similarity=0.103 Sum_probs=158.1
Q ss_pred cCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC--CCCCccccCCCchHHH
Q 018401 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGGSLSGSPSN 122 (356)
Q Consensus 47 ~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~v~v~~sgs~a~ 122 (356)
+.++|..+++ ++++.+++++.+.+... ..+|+. . ..++++++.+++++.+| ++++++++++|+++++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~ 102 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQL-VYGYTY------A--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAI 102 (392)
Confidence 5678876665 35788999998877542 112221 1 45677777788888888 5677888899999999
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC--CCCCCHHHHHHHhhhcCCcEEEEc-
Q 018401 123 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES--TGYIDYDQLEKSATLFRPKLIVAG- 199 (356)
Q Consensus 123 ~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--~~~~d~~~l~~~i~~~~~k~v~l~- 199 (356)
.+++.+++++||+|++..+.|.++.. .+...|..+..+ +.+.+ ++.+|+++|++++.+.++++|+++
T Consensus 103 ~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~--~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~ 172 (392)
T 3b1d_A 103 SIAIQAFTKEGEAVLINSPVYPPFAR--------SVRLNNRKLVSN--SLKEENGLFQIDFEQLENDIVENDVKLYLLCN 172 (392)
Confidence 98999999999999999977766543 333456555445 44212 245899999999873378888887
Q ss_pred CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc----CCCCCC--CCCccEEEeCCCCcCC--CCCceEEEE
Q 018401 200 ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSP--FEYADVVTTTTHKSLR--GPRGAMIFF 267 (356)
Q Consensus 200 ~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~----~~~~~~--l~~~D~~~~s~~K~l~--gp~gG~l~~ 267 (356)
++| +|.+.+ +++|.++|+++|+++|+|++|+...... .+.... ..+.++++.|++|+++ |.+.|++++
T Consensus 173 ~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 252 (392)
T 3b1d_A 173 PHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAII 252 (392)
Confidence 666 787665 8899999999999999999997543211 111110 0125688999999884 334488887
Q ss_pred ecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 268 RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 268 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
+++ ++.+.+........+++++.+..+++.++|+.
T Consensus 253 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (392)
T 3b1d_A 253 ENP-------------TLCAQFKHQQLVNNHHEVSSLGYIATETAYRY 287 (392)
Confidence 653 24444433222222245566666666666653
No 156
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.78 E-value=1.7e-18 Score=164.94 Aligned_cols=240 Identities=12% Similarity=0.103 Sum_probs=143.0
Q ss_pred cCCeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHH--cC-CCCCccccCCCchHH
Q 018401 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA--FR-LDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~--~g-~~~~~v~v~~sgs~a 121 (356)
+.|+|..+++ +++|.+++++.+.+..... ......|+...+..+++ +.++++ +| ++++++++++|++++
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~y~~~~g~~~lr----~~la~~l~~g~~~~~~v~~~~G~~~a 107 (400)
T 3asa_A 34 TVINLSIGDTTQPLNASVAEAFASSIARLSS--PTTCRGYGPDFGLPALR----QKLSEDFYRGFVDAKEIFISDGAKVD 107 (400)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHHHTS--SSCCCCCCCTTCCHHHH----HHHHHTTSTTSSCGGGEEEESCHHHH
T ss_pred ceEeccCCCCCCCCCHHHHHHHHHHHhcccc--cccccCCCCCCCCHHHH----HHHHHHHHcCCCCHHHEEEccChHHH
Confidence 5688887766 4688999999988764210 00111222223344555 666666 57 677788889889988
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCccccccccccccccee-eEEEecccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF-FETMPYRLNES-TGYIDYDQLEKSATLFRPKLIVAG 199 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~v~~~~~~~-~~~~d~~~l~~~i~~~~~k~v~l~ 199 (356)
+..+ ..++++||+|++..++|.++.. .+...|.. +..++ .+.+ ....|+++ + + ++++|+++
T Consensus 108 l~~~-~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~~~--~~~~~~~~~~l~~----~-~-~~~~v~l~ 170 (400)
T 3asa_A 108 LFRL-LSFFGPNQTVAIQDPSYPAYLD--------IARLTGAKEIIALP--CLQENAFFPEFPE----D-T-HIDILCLC 170 (400)
T ss_dssp HHHH-HHHHCSSCEEEEEESCCHHHHH--------HHHHTTCSEEEEEE--CCGGGTTCCCCCT----T-C-CCSEEEEE
T ss_pred HHHH-HHHcCCCCEEEECCCCcHHHHH--------HHHHcCCcceEecc--cchhcCcccChhh----c-c-CccEEEEe
Confidence 8854 4567899999999977655432 33445655 55554 3322 22344332 1 3 78999887
Q ss_pred -CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhc----ccCCCCCCC-CCccEEEeCCCCcCC--CCCceEEEE
Q 018401 200 -ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLV----AAGVIPSPF-EYADVVTTTTHKSLR--GPRGAMIFF 267 (356)
Q Consensus 200 -~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~----~~~~~~~~l-~~~D~~~~s~~K~l~--gp~gG~l~~ 267 (356)
++| +|.+.+ +++|.++|+++|+++|+|++|+.... +..+..... .+.++++.|++|+++ |.+.|++++
T Consensus 171 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~ 250 (400)
T 3asa_A 171 SPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVI 250 (400)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEEC
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEee
Confidence 777 887776 56788899999999999999973211 111111110 123588999999874 333399988
Q ss_pred ecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 268 RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 268 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
++++.... +. ++....... ....+++.+.+..+++.++++..
T Consensus 251 ~~~~~~~~--~~----~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~ 292 (400)
T 3asa_A 251 PQELTYAD--GH----FVIQDWERF-LSTTFNGASIPAQEAGVAGLSIL 292 (400)
T ss_dssp CTTCBCTT--SC----BHHHHHHHH-HHHHCCCCCHHHHHHHHHHHHHT
T ss_pred Chhhccch--hh----hHHHHHHHH-hccCccCCChHHHHHHHHHhCcH
Confidence 77531000 00 011111000 00113466777777777777653
No 157
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.78 E-value=1.2e-18 Score=165.20 Aligned_cols=234 Identities=10% Similarity=0.021 Sum_probs=148.7
Q ss_pred cCCeeecCCCC-----CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~~-----~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..+++.++.++ .+|.|.+++.+.+.... +.... + . .+..+++++++++++| ++++++++||+++
T Consensus 37 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~-~-~----~~~~~~l~~~la~~~g--~~~v~~~~~gt~a 105 (392)
T 3ruy_A 37 RYMDLLSAYSAVNQGHRHPKIINALIDQANRVT---LTSRA-F-H----SDQLGPWYEKVAKLTN--KEMVLPMNTGAEA 105 (392)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCS---CCCTT-S-E----ETTHHHHHHHHHHHHT--CSEEEEESSHHHH
T ss_pred EEEEcCCChhhhccCCCCHHHHHHHHHHHHhcc---ccccc-c-C----CHHHHHHHHHHHHhcC--CCEEEEeCcHHHH
Confidence 34566544322 47999999999886521 11111 1 1 1233456688999988 5567779999999
Q ss_pred HHHHHHhhcCC----------CCeeeecCCCCCcccCcccccccc-----cccccceeeEEEecccCCCCCCCCHHHHHH
Q 018401 122 NFQVYTALLKP----------HDRIMALDLPHGGHLSHGYQTDTK-----KISAVSIFFETMPYRLNESTGYIDYDQLEK 186 (356)
Q Consensus 122 ~~~~l~al~~~----------gd~Vl~~~~~~~~~~~~~~~~~~~-----~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~ 186 (356)
+..++..+..+ ||+|++..++|.+........... ........+..+ +. .|+++|++
T Consensus 106 ~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~d~~~l~~ 177 (392)
T 3ruy_A 106 VETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVI--PY------GDLEALKA 177 (392)
T ss_dssp HHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEE--CT------TCHHHHHH
T ss_pred HHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeee--Cc------ccHHHHHH
Confidence 99888876543 789999998886553211111000 000000011112 21 28999999
Q ss_pred HhhhcCCcEEEEc-CCC-CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccCC--CCCCCCCccEEEeCCCCcC
Q 018401 187 SATLFRPKLIVAG-ASA-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSL 257 (356)
Q Consensus 187 ~i~~~~~k~v~l~-~~n-~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~~--~~~~l~~~D~~~~s~~K~l 257 (356)
++++ ++++|+++ ++| +|.+.| +++|.++|++||+++|+|++|+ +|...... ...+ ...|++++| |++
T Consensus 178 ~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~d~~~~S--K~l 253 (392)
T 3ruy_A 178 AITP-NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDN-VTPDMYILG--KAL 253 (392)
T ss_dssp HCCT-TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSEEEEC--GGG
T ss_pred Hhcc-CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccC-CCCCEEEEc--hhh
Confidence 9986 89999998 666 898888 9999999999999999999995 32211000 0001 126888876 998
Q ss_pred CC--CCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 258 RG--PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 258 ~g--p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
+| .++|++++++ ++.+.+..... ....+.+.+..+++.++++.+..
T Consensus 254 ~gG~~~~G~~~~~~--------------~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~ 301 (392)
T 3ruy_A 254 GGGVFPISCAAANR--------------DILGVFEPGSH-GSTFGGNPLACAVSIAALEVLEE 301 (392)
T ss_dssp GTTTSCCEEEEECH--------------HHHTTCCTTSS-CCSSTTCHHHHHHHHHHHHHHHH
T ss_pred hCChhhhEEEEECH--------------HHHhhhccCCc-CCCCCCCHHHHHHHHHHHHHHHh
Confidence 77 5679998877 45544433221 12246677888888888988754
No 158
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.78 E-value=1.9e-18 Score=169.43 Aligned_cols=197 Identities=13% Similarity=0.080 Sum_probs=134.6
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC-C--CCCccccCCCchHHHHHHHHhhcCCCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-L--DPEKWGGSLSGSPSNFQVYTALLKPHD 134 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g-~--~~~~v~v~~sgs~a~~~~l~al~~~gd 134 (356)
.|..+++++.+.+.... + .....|+...+..++++++.+++++.+| . +++++++++|+++++..++.+++++||
T Consensus 102 ~P~~~~~~~~~~l~~~~--~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd 178 (498)
T 3ihj_A 102 FPEDAKKRARRILQACG--G-NSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGG 178 (498)
T ss_dssp SCHHHHHHHHHHHHHC-------------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCG
T ss_pred CCHHHHHHHHHHHHhcc--C-CCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCC
Confidence 36666777777666421 0 0111233345567888888899988885 4 677888899999999989999999876
Q ss_pred ----eeeecCCCCCcccCcccccccccccccceeeEEEecccCCC-CCCCCHHHHHHHhhhc----CCcEEEEc-CCC-C
Q 018401 135 ----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TGYIDYDQLEKSATLF----RPKLIVAG-ASA-Y 203 (356)
Q Consensus 135 ----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~i~~~----~~k~v~l~-~~n-~ 203 (356)
.|+++.++|.++.. .+...|..++.+ +.+.+ ++.+|+++|++++++. ++++|+++ ++| |
T Consensus 179 ~~~d~Vlv~~p~y~~~~~--------~~~~~g~~~v~~--~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPT 248 (498)
T 3ihj_A 179 KSRTGVMIPIPQYPLYSA--------VISELDAIQVNY--YLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPT 248 (498)
T ss_dssp GGSEEEEEEESCCTHHHH--------HHHHTTCEEEEE--ECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTT
T ss_pred CCCCEEEEeCCCchhHHH--------HHHHcCCEEEEe--eccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCC
Confidence 99999977765432 445567666555 44422 4689999999999763 47888887 877 8
Q ss_pred CCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCC------------Cc-cEEEeCCCCcCC---CCCceE
Q 018401 204 ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE------------YA-DVVTTTTHKSLR---GPRGAM 264 (356)
Q Consensus 204 g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~------------~~-D~~~~s~~K~l~---gp~gG~ 264 (356)
|.+.+ +++|+++|++||+++|+|++|.......+....++. .+ -+++.|++|++. |-++|+
T Consensus 249 G~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~ 328 (498)
T 3ihj_A 249 GQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGY 328 (498)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEE
T ss_pred CCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEE
Confidence 87765 667899999999999999998654432210111110 01 267789999984 555588
Q ss_pred EEE
Q 018401 265 IFF 267 (356)
Q Consensus 265 l~~ 267 (356)
+++
T Consensus 329 ~~~ 331 (498)
T 3ihj_A 329 MEV 331 (498)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 159
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.78 E-value=1e-18 Score=165.70 Aligned_cols=157 Identities=19% Similarity=0.163 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 94 ESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 94 ~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
..++++.+++++|.+ +. +++++|++++..++.+++++||+|+++.++|.+...++.. .+...|.++..+ +.+
T Consensus 54 ~~~l~~~la~~~~~~-~~-i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~----~~~~~g~~~~~~--~~~ 125 (386)
T 1cs1_A 54 RDVVQRALAELEGGA-GA-VLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDS----LAKRGCYRVLFV--DQG 125 (386)
T ss_dssp HHHHHHHHHHHHTCS-EE-EEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHH----HHTTTSCEEEEE--CTT
T ss_pred HHHHHHHHHHHhCCC-cE-EEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHH----HHHhcCCEEEEe--CCC
Confidence 345668899999987 43 4445669999989999999999999999888765432211 112345555444 332
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEe
Q 018401 174 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 251 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~ 251 (356)
|++++++++++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+.....+ .. ++|++++
T Consensus 126 ------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~---~~di~~~ 194 (386)
T 1cs1_A 126 ------DEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPL-AL---GADLVLH 194 (386)
T ss_dssp ------CHHHHHHHHHT-CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GG---TCSEEEE
T ss_pred ------CHHHHHHhhcc-CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCcc-cc---CceEEEE
Confidence 89999999987 89999998 666 799999999999999999999999999877653222 22 3899999
Q ss_pred CCCCcCCCCCc---eEEEEec
Q 018401 252 TTHKSLRGPRG---AMIFFRK 269 (356)
Q Consensus 252 s~~K~l~gp~g---G~l~~~~ 269 (356)
|+||++++|.+ |++++++
T Consensus 195 s~sK~~~~~~~~~~G~~~~~~ 215 (386)
T 1cs1_A 195 SCTKYLNGHSDVVAGVVIAKD 215 (386)
T ss_dssp ETTTTTTCSSCCCCEEEEESS
T ss_pred cCcccccCCCCceeEEEEeCc
Confidence 99999987764 8888876
No 160
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.78 E-value=7.8e-19 Score=167.15 Aligned_cols=240 Identities=8% Similarity=-0.032 Sum_probs=150.3
Q ss_pred cCCeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCcccc-CCCchHHHHH
Q 018401 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGG-SLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v-~~sgs~a~~~ 124 (356)
..+++++++.++|+.|++++.+.... . .+. .+++ ....++.+++++++++++|++ ++++++ ++||++++.+
T Consensus 40 ~~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~--~~~~---~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~ 112 (398)
T 2fyf_A 40 RDGRFGSGPSKVRLEQLQTLTTTAAA-L-FGT--SHRQ---APVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDA 112 (398)
T ss_dssp SSCBCCSSSCCCCHHHHHGGGTTTTT-T-TTS--CTTS---HHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHH
T ss_pred CCccccCCCCCCCHHHHHHHhhcCCC-c-cCc--CcCC---HHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHH
Confidence 46788888888999999999773211 0 010 0111 223455678999999999997 458888 9999999999
Q ss_pred HHHhhcCCC-CeeeecCCCCCcccCccccccccccccc--ceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 125 VYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 125 ~l~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
++.+++++| +.| ...+|+... . . .+... |..++.+++ + ++...+. .+++ ++++|+++ +
T Consensus 113 ~~~~l~~~gv~~v--~~~~~~~~~---~---~-~~~~~~~g~~~~~v~~--~-~g~~~~~-----~i~~-~~~~v~~~~~ 174 (398)
T 2fyf_A 113 AAFGLIDKRSLHL--TYGEFSAKF---A---S-AVSKNPFVGEPIIITS--D-PGSAPEP-----QTDP-SVDVIAWAHN 174 (398)
T ss_dssp HHHHTCSSCEEEE--ECSHHHHHH---H---H-HHHHCTTSCCCEEEEC--C-TTCCCCC-----CCCT-TCSEEEEESE
T ss_pred HHHHhcCCCeEEE--eCCHHHHHH---H---H-HHHHhCCCCceEEEec--C-CCCCCCc-----cccC-CCCEEEEeCc
Confidence 999999887 443 222221100 0 0 11112 455555643 3 2223332 1444 79999887 6
Q ss_pred CC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhc---
Q 018401 201 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN--- 275 (356)
Q Consensus 201 ~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~--- 275 (356)
+| +|.+.|+++|.++ +|+++|+|++|+.|..+.++. ++|++++|+||+++++.| |++++++++...+
T Consensus 175 ~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~~-----~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~ 246 (398)
T 2fyf_A 175 ETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDIA-----ETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAI 246 (398)
T ss_dssp ETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCGG-----GCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHH
T ss_pred CCCcceecchHHhhhh---cCCeEEEEeccccCCcccCcc-----cCcEEEEecCcccCCCCceEEEEECHHHHHHhhcc
Confidence 66 8999999988877 899999999999887664432 379999999998877656 8888887431110
Q ss_pred --cCCc-chhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 276 --KQGK-EVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 276 --~~g~-~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
.++. ..+.......+.......++|++...++++.+|++.+.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~ 293 (398)
T 2fyf_A 247 AATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGN 293 (398)
T ss_dssp HHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 0000 0000100000000011234789999999999999887653
No 161
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.78 E-value=9.1e-19 Score=166.65 Aligned_cols=157 Identities=18% Similarity=0.174 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 94 ESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 94 ~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
.+++++.+++++|.+ ++++++||++++..++.+++++||+|+++.++|+++...... .....|..+..+ +.+
T Consensus 68 ~~~l~~~la~~~g~~--~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~----~~~~~g~~~~~v--~~~ 139 (392)
T 3qhx_A 68 RTALEAALAAVEDAA--FGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDK----VFTGWNVEYTPV--ALA 139 (392)
T ss_dssp HHHHHHHHHHHTTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHH----TGGGGTCEEEEE--CTT
T ss_pred HHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHH----HHHhcCcEEEEe--CCC
Confidence 345679999999987 456688999999989999999999999999888765432211 122345555444 332
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEe
Q 018401 174 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 251 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~ 251 (356)
|++++++++.+ ++++|+++ ++| +|.+.|+++|+++|+++|+++|+|++|+.+... ..... ++|+++.
T Consensus 140 ------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~-~~~~~---~~di~~~ 208 (392)
T 3qhx_A 140 ------DLDAVRAAIRP-TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQ-QPLSL---GADVVLH 208 (392)
T ss_dssp ------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTC-CGGGG---TCSEEEE
T ss_pred ------CHHHHHHhhCC-CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccC-ChHHh---CCcEEEE
Confidence 89999999987 89999987 777 899999999999999999999999999765321 11122 4899999
Q ss_pred CCCCcCCCCC---ceEEEEec
Q 018401 252 TTHKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 252 s~~K~l~gp~---gG~l~~~~ 269 (356)
|+||+++++. +|+++.++
T Consensus 209 S~sK~lg~~g~~~~G~v~~~~ 229 (392)
T 3qhx_A 209 STTKYIGGHSDVVGGALVTND 229 (392)
T ss_dssp ETTTTTTCSSCCCCEEEEESC
T ss_pred cCccccCCCCCceEEEEEECc
Confidence 9999997754 68888875
No 162
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.78 E-value=7.7e-19 Score=168.29 Aligned_cols=159 Identities=19% Similarity=0.188 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEeccc
Q 018401 93 AESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 172 (356)
Q Consensus 93 l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 172 (356)
..+++++++++++|.+ ++++++||++++..++.+++++||+|+++++.|+++...... .....|.+++.+ +.
T Consensus 82 ~~~~l~~~la~~~g~~--~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~----~~~~~g~~~~~v--~~ 153 (414)
T 3ndn_A 82 TVSVFEERLRLIEGAP--AAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSE----ILPRWGVQTVFV--DG 153 (414)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHT----HHHHTTCEEEEE--CT
T ss_pred HHHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHH----HHHHcCcEEEEe--CC
Confidence 4456668999999874 456688999999989999999999999999888765432211 112246555444 33
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEE
Q 018401 173 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 250 (356)
Q Consensus 173 ~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~ 250 (356)
+ |+++|++++++ ++++|+++ ++| +|.+.|+++|+++|+++|+++|+|++|+.|.....+ .. ++|+++
T Consensus 154 ~------d~~~l~~ai~~-~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~~---g~div~ 222 (414)
T 3ndn_A 154 D------DLSQWERALSV-PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGF-PL---GVDVVV 222 (414)
T ss_dssp T------CHHHHHHHTSS-CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCG-GG---TCSEEE
T ss_pred C------CHHHHHHhcCC-CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hc---CCCeEe
Confidence 2 89999999987 89999998 777 899999999999999999999999999877543222 23 389999
Q ss_pred eCCCCcCCCCC---ceEEEEecC
Q 018401 251 TTTHKSLRGPR---GAMIFFRKG 270 (356)
Q Consensus 251 ~s~~K~l~gp~---gG~l~~~~~ 270 (356)
.|++|+++++. +|+++.+++
T Consensus 223 ~S~sK~l~~~G~~~~G~vv~~~~ 245 (414)
T 3ndn_A 223 YSGTKHIDGQGRVLGGAILGDRE 245 (414)
T ss_dssp EETTTTTTCSSCCCCEEEEECHH
T ss_pred ccCCccccCCCCceEEEEEECHH
Confidence 99999997643 688888763
No 163
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.77 E-value=1.7e-18 Score=168.19 Aligned_cols=198 Identities=16% Similarity=0.108 Sum_probs=137.9
Q ss_pred cCCeeecC---CCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHH
Q 018401 47 KGLELIPS---ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 47 ~~i~L~~~---~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~ 123 (356)
+.|+|..+ ..++|++|.++....... .. ..+...|+ ..+. ...+++++++++++|++ +++++++|++++.
T Consensus 90 ~~i~l~~g~~~~~~~~~~i~~a~~~~~~~-~~--~~~~~~Y~-~~g~-~~~~~l~~~la~~~g~~--~~i~~~sGt~al~ 162 (464)
T 1ibj_A 90 LLVNLDNKFDPFDAMSTPLYQTATFKQPS-AI--ENGPYDYT-RSGN-PTRDALESLLAKLDKAD--RAFCFTSGMAALS 162 (464)
T ss_dssp HHTCCCCSSCTTCCSSCCCCCCSBCCCSS-SS--CCCSCSBT-TTCC-HHHHHHHHHHHHHHTCS--EEEEESSHHHHHH
T ss_pred eEEECCCCCCCCCCCCccHHhhhhhhhhc-cc--ccCCcccc-CCCC-HHHHHHHHHHHHHhCCC--eEEEECCHHHHHH
Confidence 45777654 335677777776543111 00 00111122 1122 25667889999999976 4566778888887
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 202 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n 202 (356)
.++. ++++||+|+++.+.|+++...+. ..+...|.+++.+ +.+ |+++|++++++ ++++|+++ ++|
T Consensus 163 ~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G~~v~~v--~~~------d~~~l~~~i~~-~tk~v~l~~p~N 228 (464)
T 1ibj_A 163 AVTH-LIKNGEEIVAGDDVYGGSDRLLS----QVVPRSGVVVKRV--NTT------KLDEVAAAIGP-QTKLVWLESPTN 228 (464)
T ss_dssp HHHT-TSCTTCEEEEESSCCHHHHHHHH----HTSGGGTCEEEEE--CTT------SHHHHHHHCCS-SEEEEEECSSCT
T ss_pred HHHH-HhCCCCEEEEECCCchhHHHHHH----HHHHHcCCEEEEe--CCC------CHHHHHHHhcc-CceEEEEeCCCC
Confidence 6664 78999999999988876643211 1133456656555 332 89999999986 89999998 777
Q ss_pred -CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc---eEEEEec
Q 018401 203 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG---AMIFFRK 269 (356)
Q Consensus 203 -~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g---G~l~~~~ 269 (356)
+|.+.|+++|+++|++||+++|+|++|+.|.....+. . ++|+++.|+||+++||.| |++++++
T Consensus 229 ptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~-~---~~div~~S~sK~~~g~~Gl~~G~l~~~~ 295 (464)
T 1ibj_A 229 PRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKG 295 (464)
T ss_dssp TTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGG-T---TCSEEEEETTTTTTCSSCCCCEEEEECS
T ss_pred CCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhh-c---CCEEEEECCcccccCCCCCcEEEEEECh
Confidence 8999999999999999999999999998775421111 2 389999999999987754 8888875
No 164
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.77 E-value=4.7e-18 Score=160.04 Aligned_cols=233 Identities=12% Similarity=0.098 Sum_probs=145.4
Q ss_pred CCeeecCC---C--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHH
Q 018401 48 GLELIPSE---N--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 48 ~i~L~~~~---~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~ 122 (356)
.+++..+. + .+++.+++++.+.+... +..... |. .... .++++++++++|+ ++++++++||++++
T Consensus 30 ~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~---~~~~~~-y~-~~~~----~~l~~~la~~~g~-~~~v~~~~g~t~a~ 99 (375)
T 2eh6_A 30 YLDFVSGIGVNSLGHAYPKLTEALKEQVEKL---LHVSNL-YE-NPWQ----EELAHKLVKHFWT-EGKVFFANSGTESV 99 (375)
T ss_dssp EEESSHHHHTCTTCBSCHHHHHHHHHHHHHC---SCCCTT-BC-CHHH----HHHHHHHHHTSSS-CEEEEEESSHHHHH
T ss_pred EEEcCCcccccccCCCCHHHHHHHHHHHHhc---cccCcc-cC-CHHH----HHHHHHHHhhcCC-CCeEEEeCchHHHH
Confidence 45665432 1 16899999999988652 112222 22 2222 3456899999998 36777799999998
Q ss_pred HHHHHh---hc---CCC-CeeeecCCCCCcccCccccccccccccccee-----eEEEecccCCCCCCCCHHHHHHHhhh
Q 018401 123 FQVYTA---LL---KPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIF-----FETMPYRLNESTGYIDYDQLEKSATL 190 (356)
Q Consensus 123 ~~~l~a---l~---~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~~~v~~~~~~~~~~~d~~~l~~~i~~ 190 (356)
..++.+ +. +|| |+|++++++|.+................+.. +..+ + ..|+++|++++++
T Consensus 100 ~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~d~~~l~~~l~~ 171 (375)
T 2eh6_A 100 EAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYA--K------LNDIDSVYKLLDE 171 (375)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEE--C------TTCHHHHHTTCCT
T ss_pred HHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeC--C------CchHHHHHHHhcC
Confidence 877764 35 788 9999999887655332211100000000100 1111 1 1489999998886
Q ss_pred cCCcEEEEc-CCC-CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCCCCcCCCCC
Q 018401 191 FRPKLIVAG-ASA-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGPR 261 (356)
Q Consensus 191 ~~~k~v~l~-~~n-~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~~K~l~gp~ 261 (356)
++++|+++ ++| +|.+.+ +++|.++|++||+++|+|++|+ +|..+.. +...+ ..+|++++| |+++++.
T Consensus 172 -~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~d~~s~S--K~~~~g~ 247 (375)
T 2eh6_A 172 -ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFN-LKPDVIALA--KGLGGGV 247 (375)
T ss_dssp -TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSEEEEC--GGGGTTS
T ss_pred -CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcC-CCCCEEEEc--ccccCCC
Confidence 88999998 444 688877 9999999999999999999998 4432211 11111 127888777 9887766
Q ss_pred c-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHh
Q 018401 262 G-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 317 (356)
Q Consensus 262 g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~ 317 (356)
+ |++++++ ++.+.+........+++ +....+++.++++.+.
T Consensus 248 ~~G~~~~~~--------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~ 289 (375)
T 2eh6_A 248 PIGAILARE--------------EVAQSFTPGSHGSTFGG-NPLACRAGTVVVDEVE 289 (375)
T ss_dssp CCEEEEEEH--------------HHHTTCCTTSCCCSSTT-CHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcH--------------HHHhhhcCCCCCCCCCC-CHHHHHHHHHHHHHHH
Confidence 6 9999887 44444433212222344 4444454556777664
No 165
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.77 E-value=8.5e-19 Score=166.91 Aligned_cols=155 Identities=13% Similarity=0.087 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 94 ESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 94 ~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
.+++++.+++++|.+ +.++++||++++..++. ++++||+|+++.++|++....+.. .+...|.+++.+ +.+
T Consensus 57 ~~~lr~~la~~~g~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~----~~~~~G~~v~~v--~~~ 127 (393)
T 1n8p_A 57 RENLERAVAALENAQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTK----VANAHGVETSFT--NDL 127 (393)
T ss_dssp HHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHH----TSTTTCSCCEEE--SSH
T ss_pred HHHHHHHHHHHhCCC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHH----HHHHcCcEEEEe--CCC
Confidence 345679999999987 34556677999998888 899999999999888765432210 122345555555 332
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHc----CCEEEEeccchhhhcccCCCCCCCCCcc
Q 018401 174 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQ----KAIMLADMAHISGLVAAGVIPSPFEYAD 247 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~----g~~vivD~a~~~g~~~~~~~~~~l~~~D 247 (356)
| ++|++++++ ++++|+++ ++| +|.+.|+++|.++|+++ |+++|+|++|+.+... +.... ++|
T Consensus 128 ------d-~~l~~~i~~-~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~~~---~~d 195 (393)
T 1n8p_A 128 ------L-NDLPQLIKE-NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPLNF---GAD 195 (393)
T ss_dssp ------H-HHHHHHSCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGGGG---TCS
T ss_pred ------h-HHHHHhccc-CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHHHc---CCe
Confidence 6 889999886 89999997 777 89999999999999999 9999999999887653 32223 389
Q ss_pred EEEeCCCCcCCCCC---ceEEEEec
Q 018401 248 VVTTTTHKSLRGPR---GAMIFFRK 269 (356)
Q Consensus 248 ~~~~s~~K~l~gp~---gG~l~~~~ 269 (356)
++++|+||+++++. ||+++.++
T Consensus 196 i~~~S~sK~~g~~G~rigG~~~~~~ 220 (393)
T 1n8p_A 196 IVVHSATKYINGHSDVVLGVLATNN 220 (393)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEESC
T ss_pred EEEEECcccccCCCCceeEEEEeCC
Confidence 99999999876543 38888753
No 166
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.76 E-value=1e-18 Score=168.03 Aligned_cols=239 Identities=12% Similarity=0.022 Sum_probs=156.0
Q ss_pred HcCCeeecCCC-C--CcHHH--HHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHc-CCCCCc---cccCC
Q 018401 46 WKGLELIPSEN-F--TSVSV--MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF-RLDPEK---WGGSL 116 (356)
Q Consensus 46 ~~~i~L~~~~~-~--~~~~V--~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~-g~~~~~---v~v~~ 116 (356)
++.|+|..+++ . .++.+ ++++.+.+......+| +...+..++++++.+++.+.. ++++++ +++++
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y------~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~ 120 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPY------APPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTN 120 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSC------CCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEES
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCccccccc------CCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcC
Confidence 46789988776 3 35556 6766665533111123 222345667655555554443 667777 77799
Q ss_pred CchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccc-cceeeEEEecccCCCCCCCCHHHHHHHhhhc--CC
Q 018401 117 SGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISA-VSIFFETMPYRLNESTGYIDYDQLEKSATLF--RP 193 (356)
Q Consensus 117 sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~--~~ 193 (356)
|+++++..++.+++++||+|+++.+.|.++.. .+.. .|.++..+ +.+.+++.+|+++|++++++. ++
T Consensus 121 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~~g~~~~~~--~~~~~~~~~d~~~l~~~l~~~~~~~ 190 (430)
T 2x5f_A 121 ALTHGLSLVGDLFVNQDDTILLPEHNWGNYKL--------VFNTRNGANLQTY--PIFDKDGHYTTDSLVEALQSYNKDK 190 (430)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHTTTTCCEEEEE--CCBCTTSCBCSHHHHHHHHHCCSSE
T ss_pred CchHHHHHHHHHHhCCCCEEEEcCCcCccHHH--------HHHHhcCCeEEEE--eccCccCCcCHHHHHHHHHhcCCCC
Confidence 99999999999999999999999977765532 3334 56556555 454323678999999998752 57
Q ss_pred cEEEEc-CCC-CCCccc---HHHHHHHHHH-----cCCEEEEeccchhhhcccC-CCC----C-CCCCc---cEEEeCCC
Q 018401 194 KLIVAG-ASA-YARLYD---YERIRKVCNK-----QKAIMLADMAHISGLVAAG-VIP----S-PFEYA---DVVTTTTH 254 (356)
Q Consensus 194 k~v~l~-~~n-~g~~~~---l~~I~~la~~-----~g~~vivD~a~~~g~~~~~-~~~----~-~l~~~---D~~~~s~~ 254 (356)
++++++ ++| +|.+.+ +++|.++|++ +|+++|+|++|+....... ... . ...+. ++++.|+|
T Consensus 191 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 270 (430)
T 2x5f_A 191 VIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGAT 270 (430)
T ss_dssp EEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHH
T ss_pred EEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecc
Confidence 888887 777 898877 8899999999 9999999999875332111 000 0 01124 68899999
Q ss_pred CcCCCC--CceEEEE---ecCcchhccCCcchhhhHHHhhccccCC---CCCCCCcHHHHHHHHHHHH
Q 018401 255 KSLRGP--RGAMIFF---RKGVKEINKQGKEVFYDYEEKINQAVFP---GLQGGPHNHTITGLAVALK 314 (356)
Q Consensus 255 K~l~gp--~gG~l~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~gt~~~~~~~al~~Al~ 314 (356)
|+++.| +.|++++ ++ ++.+.+...... ...++++.+..+++.++++
T Consensus 271 K~~~~~G~riG~~~~~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (430)
T 2x5f_A 271 KEFFAWGFRVGFMTFGTSDQ--------------TTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLK 324 (430)
T ss_dssp HHTTCGGGCCEEEEEBCCCH--------------HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred cCCCCCCCCeEEEEEecCCH--------------HHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHc
Confidence 987433 2389888 55 333333221100 0234667777777778887
No 167
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.76 E-value=3.3e-18 Score=163.48 Aligned_cols=221 Identities=12% Similarity=0.024 Sum_probs=142.5
Q ss_pred ccChHHHHHHHHHHHHH-----HcCCeeecCCC-------CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHH
Q 018401 29 VVDPEIADIIEHEKARQ-----WKGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (356)
Q Consensus 29 ~~~~~~~~~~~~~~~~~-----~~~i~L~~~~~-------~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (356)
..+..++..+....+.. ++.|+|..++. ++++.|.+++.+..... ..+|+ ...+..+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~Y~------~~~g~~~lr~~ 87 (413)
T 3t18_A 15 NGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSH-IASYA------PIEGEKDYRKI 87 (413)
T ss_dssp CCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHH-HHSCC------CTTCCHHHHHH
T ss_pred CCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCccc-ccCcC------CCCCCHHHHHH
Confidence 34555666555432222 25788876652 36788888887643321 11222 22345677777
Q ss_pred HHHHHHHHcCCC-CCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCC
Q 018401 97 CQKRALEAFRLD-PEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 175 (356)
Q Consensus 97 ~~~~la~~~g~~-~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 175 (356)
+.+++....+.+ ++++++++||++++..++.++++|||+|+++.+.|.++. ..+...|.+++.+ +...+
T Consensus 88 la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~--------~~~~~~g~~~~~~--~~~~~ 157 (413)
T 3t18_A 88 VIDTLFGPYKPEGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYR--------KICEEFGRNFKTF--EFFTD 157 (413)
T ss_dssp HHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHH--------HHHHHHTCEEEEE--CCBCT
T ss_pred HHHHHhcccCccccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHH--------HHHHHhCCeEEEe--eccCC
Confidence 777776665542 337777999999999999999999999999997665443 2455667666555 44324
Q ss_pred CCCCCHHHHHHHhhhc---CCc-EEEEc-C-CC-CCCcccHHHHH---HHHH------HcCCEEEEeccchhhhcccCCC
Q 018401 176 TGYIDYDQLEKSATLF---RPK-LIVAG-A-SA-YARLYDYERIR---KVCN------KQKAIMLADMAHISGLVAAGVI 239 (356)
Q Consensus 176 ~~~~d~~~l~~~i~~~---~~k-~v~l~-~-~n-~g~~~~l~~I~---~la~------~~g~~vivD~a~~~g~~~~~~~ 239 (356)
++.+|+++|++++.+. +++ +++++ | +| +|.+.+.+++. ++|+ +||+++|+|++|.. ....+..
T Consensus 158 ~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~-~~~~~~~ 236 (413)
T 3t18_A 158 DFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLE-FAGDGDQ 236 (413)
T ss_dssp TSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGG-GSSSSST
T ss_pred CCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEeccccc-ccCChhh
Confidence 4689999999998752 677 67776 6 67 89888766555 5555 89999999999742 2111110
Q ss_pred CCCC----C--Ccc---EEEeCCCCcCCCC--CceEEEE
Q 018401 240 PSPF----E--YAD---VVTTTTHKSLRGP--RGAMIFF 267 (356)
Q Consensus 240 ~~~l----~--~~D---~~~~s~~K~l~gp--~gG~l~~ 267 (356)
..++ . ..| +++.|++|+++.| +.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~ 275 (413)
T 3t18_A 237 QRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVG 275 (413)
T ss_dssp TTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEE
T ss_pred HHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEE
Confidence 0000 0 012 7788999987533 2288887
No 168
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.76 E-value=1.5e-18 Score=166.32 Aligned_cols=223 Identities=15% Similarity=0.037 Sum_probs=150.4
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCeeecCCCC-----CcHHHHHHHH--hhhhcc-CCCCCCCCccCCCchhHHHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENF-----TSVSVMQAVG--SVMTNK-YSEGYPGARYYGGNEYIDMAESL 96 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~-----~~~~V~~a~~--~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~ 96 (356)
..+.++.+.++.++.+. +.....|+|..+.+. +++.+++++. +.+... ...+|| +...+..++
T Consensus 5 ~~~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp-----~~~~g~~~l--- 75 (423)
T 3ez1_A 5 EASRPALDLARQAYEAF-KARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYP-----GGVAGLPSA--- 75 (423)
T ss_dssp -CCHHHHHHHHHHHHHH-HHHTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSC-----SCTTCCHHH---
T ss_pred HHHHHHHHHHHHHHHHh-hcCCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCC-----CCCCChHHH---
Confidence 35566778888888876 444577898877664 4557888775 444321 111231 222334444
Q ss_pred HHHHHHHHcCCCCCccccCCCchHHHH--HHHHhhcC--C---------CCeeeecCCCCCcccCcccccccccccccce
Q 018401 97 CQKRALEAFRLDPEKWGGSLSGSPSNF--QVYTALLK--P---------HDRIMALDLPHGGHLSHGYQTDTKKISAVSI 163 (356)
Q Consensus 97 ~~~~la~~~g~~~~~v~v~~sgs~a~~--~~l~al~~--~---------gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 163 (356)
|+.++++++++++++++++|+++++. .++.+++. | ||+|+++.+.|.++. ..+...|.
T Consensus 76 -r~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~--------~~~~~~g~ 146 (423)
T 3ez1_A 76 -RALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHF--------LLLQTLGF 146 (423)
T ss_dssp -HHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHH--------HHHHHHTC
T ss_pred -HHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHH--------HHHHHcCC
Confidence 48888889999888888999998886 78888877 8 599999996665443 24455676
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhh-hcCCcEEEEc--CCC-CCCcccHH---HHHHHH-HHcCCEEEEeccchhhhcc
Q 018401 164 FFETMPYRLNESTGYIDYDQLEKSAT-LFRPKLIVAG--ASA-YARLYDYE---RIRKVC-NKQKAIMLADMAHISGLVA 235 (356)
Q Consensus 164 ~~~~v~~~~~~~~~~~d~~~l~~~i~-~~~~k~v~l~--~~n-~g~~~~l~---~I~~la-~~~g~~vivD~a~~~g~~~ 235 (356)
+++.+ +.+ ++ .+|+++|++++. ..++++|++. ++| +|.+.+.+ +|.++| ++||+++|+|++|+.....
T Consensus 147 ~~~~v--~~~-~~-g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~ 222 (423)
T 3ez1_A 147 ELLTV--DMQ-SD-GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLV 222 (423)
T ss_dssp EEEEE--EEE-TT-EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCC
T ss_pred EEEec--cCC-CC-CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcC
Confidence 66555 444 22 489999999995 2378888764 567 89888766 778888 8999999999998743222
Q ss_pred c-CCCCC----------CCCCccEEEeCCCCcCC-CCCceEEEEec
Q 018401 236 A-GVIPS----------PFEYADVVTTTTHKSLR-GPRGAMIFFRK 269 (356)
Q Consensus 236 ~-~~~~~----------~l~~~D~~~~s~~K~l~-gp~gG~l~~~~ 269 (356)
. +.... ...+.++++.|++|++. |.+.|+++.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~ 268 (423)
T 3ez1_A 223 EEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE 268 (423)
T ss_dssp SSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH
T ss_pred CCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH
Confidence 1 11000 01136789999999643 33449988877
No 169
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.76 E-value=3.7e-18 Score=163.03 Aligned_cols=264 Identities=15% Similarity=0.096 Sum_probs=159.2
Q ss_pred ccccccChHHHHHHHHHHHHH--HcCCeeecCCC-------CCcHHHHHHHHh-hhhccCCCCCCCCccCCCchhHHHHH
Q 018401 25 APLEVVDPEIADIIEHEKARQ--WKGLELIPSEN-------FTSVSVMQAVGS-VMTNKYSEGYPGARYYGGNEYIDMAE 94 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~--~~~i~L~~~~~-------~~~~~V~~a~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~ 94 (356)
+++..++++.+..+....+.. ++.|+|..+.. ++++.|.+++.+ .+......+ |+...+..+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~------y~~~~g~~~lr 79 (412)
T 1yaa_A 6 NNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHE------YLGITGLPSLT 79 (412)
T ss_dssp TTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCC------CCCTTCCHHHH
T ss_pred ccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccC------CCCCCCcHHHH
Confidence 444555444433333332221 35678876652 467999999998 775311112 22234456777
Q ss_pred HHHHHHHHHHcCC--CCCcccc--CCCchHHHHHH--HHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEE
Q 018401 95 SLCQKRALEAFRL--DPEKWGG--SLSGSPSNFQV--YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 168 (356)
Q Consensus 95 ~~~~~~la~~~g~--~~~~v~v--~~sgs~a~~~~--l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 168 (356)
+++.+++...+|. +++++++ ++||++++..+ +...+.|||+|+++.++|.++.. .+...|.+++.+
T Consensus 80 ~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~v 151 (412)
T 1yaa_A 80 SNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMA--------IFENQGLKTATY 151 (412)
T ss_dssp HHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHH--------HHHTTTCCEEEE
T ss_pred HHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHH--------HHHHcCceEEEE
Confidence 6666666555553 5778888 99999988866 34456899999999977765532 344456666656
Q ss_pred ecccCCCCCCCCHHHHHHHhhhcC--CcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhc-------
Q 018401 169 PYRLNESTGYIDYDQLEKSATLFR--PKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLV------- 234 (356)
Q Consensus 169 ~~~~~~~~~~~d~~~l~~~i~~~~--~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~------- 234 (356)
++. +++++.+|+++|++++.+.+ +.+++++ ++| +|.+.+ +++|.++|++||+++|+|++|+....
T Consensus 152 ~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~ 230 (412)
T 1yaa_A 152 PYW-ANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDA 230 (412)
T ss_dssp ECE-ETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHT
T ss_pred eee-cCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchh
Confidence 431 32356799999999997632 3344446 777 887765 66788999999999999999853211
Q ss_pred -cc-CCCCCCCCC--ccEEEeCCCCcCCCCCc---eEEE--E-----ecCcchhccCCcchhhhHHHhhccccCCCCCCC
Q 018401 235 -AA-GVIPSPFEY--ADVVTTTTHKSLRGPRG---AMIF--F-----RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGG 300 (356)
Q Consensus 235 -~~-~~~~~~l~~--~D~~~~s~~K~l~gp~g---G~l~--~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt 300 (356)
+. .+.... .. .++++.|++|++ ||.| |+++ . +++... .+.+.+..... ..+++
T Consensus 231 ~~~~~~~~~~-~~~~~~i~~~s~sK~~-~~~GlriG~~~~~~~~~~~~~~~~~----------~l~~~l~~~~~-~~~~~ 297 (412)
T 1yaa_A 231 YAVRLGVEKL-STVSPVFVCQSFAKNA-GMYGERVGCFHLALTKQAQNKTIKP----------AVTSQLAKIIR-SEVSN 297 (412)
T ss_dssp HHHHHHHHHT-TTTCCEEEEEECTTTS-CCGGGCEEEEEEECCSCTTHHHHHH----------HHHHHHHHHHH-TTTSS
T ss_pred HHHHHHHhcC-CCCcceEEEeccCCCC-CCcCCcceEEEEEecCCCCCHHHHH----------HHHHHHHHHHh-hccCC
Confidence 11 111011 00 357899999977 4555 8887 5 331000 03333332111 12345
Q ss_pred CcHHHHHHHHHHHHHH
Q 018401 301 PHNHTITGLAVALKQV 316 (356)
Q Consensus 301 ~~~~~~~al~~Al~~~ 316 (356)
++.+..+++.++++..
T Consensus 298 ~~~~~~~a~~~~l~~~ 313 (412)
T 1yaa_A 298 PPAYGAKIVAKLLETP 313 (412)
T ss_dssp CCHHHHHHHHHHHHSH
T ss_pred CChHHHHHHHHHhCCH
Confidence 5667777777777543
No 170
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.76 E-value=2.2e-18 Score=164.59 Aligned_cols=155 Identities=18% Similarity=0.154 Sum_probs=118.2
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
.++++.+++++|.+ +. +++++|++++..++. ++++||+|+++++.|+++...+.. .+...|.+++.+ +.+
T Consensus 70 ~~l~~~la~~~g~~-~~-i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~----~~~~~G~~v~~v--~~~- 139 (403)
T 3cog_A 70 NCLEKAVAALDGAK-YC-LAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQ----VASEFGLKISFV--DCS- 139 (403)
T ss_dssp HHHHHHHHHHHTCS-EE-EEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHH----TGGGGTCEEEEE--CTT-
T ss_pred HHHHHHHHHHhCCC-cE-EEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHH----HHHHcCCEEEEE--CCC-
Confidence 34558888999987 33 445567788888888 899999999999888765432211 123346555444 332
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcC-CEEEEeccchhhhcccCCCCCCCCCccEEEe
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIPSPFEYADVVTT 251 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g-~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~ 251 (356)
|++++++++++ ++++|+++ ++| +|.+.|+++|+++|+++| +++|+|++|+.+.....+. . ++|+++.
T Consensus 140 -----d~~~l~~~i~~-~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~-~---~~div~~ 209 (403)
T 3cog_A 140 -----KIKLLEAAITP-ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLA-L---GADISMY 209 (403)
T ss_dssp -----SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTT-T---TCSEEEE
T ss_pred -----CHHHHHHhcCc-CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCccc-c---CCeEEEE
Confidence 89999999987 89999987 777 899999999999999999 9999999998775322211 2 4899999
Q ss_pred CCCCcCCCCCc---eEEEEec
Q 018401 252 TTHKSLRGPRG---AMIFFRK 269 (356)
Q Consensus 252 s~~K~l~gp~g---G~l~~~~ 269 (356)
|+||+++||.+ |++++++
T Consensus 210 S~sK~~~g~~~~~~G~v~~~~ 230 (403)
T 3cog_A 210 SATKYMNGHSDVVMGLVSVNC 230 (403)
T ss_dssp ETTTTTTCSSCCCCEEEEECC
T ss_pred cChhhccCCCCCeEEEEEECc
Confidence 99999998764 8888864
No 171
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.76 E-value=7.4e-19 Score=167.90 Aligned_cols=227 Identities=10% Similarity=0.061 Sum_probs=137.3
Q ss_pred HHHHHHHHHHHH--HHcCCeeecCCCCCcHHH----HHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC
Q 018401 33 EIADIIEHEKAR--QWKGLELIPSENFTSVSV----MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR 106 (356)
Q Consensus 33 ~~~~~~~~~~~~--~~~~i~L~~~~~~~~~~V----~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g 106 (356)
.+...+.+..+. ..+.|+|..+.+...+.+ .+++.+.+.+... ......|+...+..++++++.+++.+.+|
T Consensus 16 ~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~y~~~~g~~~lr~~ia~~~~~~~g 93 (417)
T 3g7q_A 16 GITRLMEDLNDGLRTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKA--ADALCNYDGPQGKTALLNALAVLLRETLG 93 (417)
T ss_dssp CHHHHHHHHHC-----CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHH--HHHHHSTTCTTSHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHhhccCCCceEecCcCCCCCChHHHHHHHHHHHHhhCCcc--cceeeccCCCCCcHHHHHHHHHHHHHHhC
Confidence 344444443222 246789988877664544 4444444332100 00001233345577888888888877776
Q ss_pred C--CCCccccCCCchHHHHHHHHhhcCCCC-----eeeec-CCCCCcccCcccccccccccccceeeEEEecccCCCCCC
Q 018401 107 L--DPEKWGGSLSGSPSNFQVYTALLKPHD-----RIMAL-DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 178 (356)
Q Consensus 107 ~--~~~~v~v~~sgs~a~~~~l~al~~~gd-----~Vl~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 178 (356)
. +++++++|+|+++++..++.+++++|| +|+++ .++|.++........ ...+.....++++.+..++.
T Consensus 94 ~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 169 (417)
T 3g7q_A 94 WDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDD----LFVSARPNIELLPEGQFKYH 169 (417)
T ss_dssp CCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----C----CEEECCCEEEEEGGGEEEEE
T ss_pred CCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchh----hhccccCcccccCCcccccc
Confidence 5 677888899999999999999999988 89987 777765543221000 01122233333333211346
Q ss_pred CCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCCCC--CCCCccEEEe
Q 018401 179 IDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFEYADVVTT 251 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~--~l~~~D~~~~ 251 (356)
+|+++|+ +.+ ++++|+++ ++| +|.+.+ +++|.++|++||+++|+|++|+........... ...+.++++.
T Consensus 170 ~d~~~l~--~~~-~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~ 246 (417)
T 3g7q_A 170 VDFEHLH--IGE-ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCM 246 (417)
T ss_dssp CCGGGCC--CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEE
T ss_pred cCHHHhc--ccc-CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEE
Confidence 7888887 555 78898887 878 898877 888999999999999999998643211111110 1124679999
Q ss_pred CCCCcCCCC--CceEEEEec
Q 018401 252 TTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 252 s~~K~l~gp--~gG~l~~~~ 269 (356)
|++|+ ++| +.|+++.++
T Consensus 247 s~sK~-~~~G~r~G~~~~~~ 265 (417)
T 3g7q_A 247 SLSKL-GLPGSRCGIIIAND 265 (417)
T ss_dssp ESGGG-TCTTSCCEEEECCH
T ss_pred echhc-cCCCcceEEEEeCH
Confidence 99994 333 238888766
No 172
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.76 E-value=1.4e-18 Score=162.73 Aligned_cols=197 Identities=11% Similarity=0.040 Sum_probs=129.2
Q ss_pred cCCeeecCCCCC--cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHH
Q 018401 47 KGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQ 124 (356)
Q Consensus 47 ~~i~L~~~~~~~--~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~ 124 (356)
..+.+..++|++ +|.|++++.+.+.. ..|+... ...++++++++++|.+.. ++++||++++..
T Consensus 14 ~~~~~~~~~~~~g~~p~v~~ai~~~~~~---------~~~~~~~----~~~~l~~~la~~~~~~~~--i~~~~g~~a~~~ 78 (359)
T 3pj0_A 14 PYKLGGNGPRNVGVLTEALQNIDDNLES---------DIYGNGA----VIEDFETKIAKILGKQSA--VFFPSGTMAQQI 78 (359)
T ss_dssp SEESSSSSCCBHHHHHHHTTTSCTTCBC---------CBTTBSH----HHHHHHHHHHHHHTCSEE--EEESCHHHHHHH
T ss_pred chhhcCCCccccCCCHHHHHHHHhhccc---------CcccCCH----HHHHHHHHHHHHhCCCcE--EEeCCHHHHHHH
Confidence 455667778876 78888888774432 1122222 234556889999998754 456788889888
Q ss_pred HHHhhcCCCCe--eeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 018401 125 VYTALLKPHDR--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 201 (356)
Q Consensus 125 ~l~al~~~gd~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~ 201 (356)
++.+++.+||+ |++..+.|........ .....|..++.+ +. +++.+|+++|+++ .+ ++++|+++ ++
T Consensus 79 a~~~~~~~g~~~vvi~~~~~~~~~~~~~~-----~~~~~g~~~~~v--~~--~~~~~d~~~l~~~-~~-~~~~v~~~~p~ 147 (359)
T 3pj0_A 79 ALRIWADRKENRRVAYHPLSHLEIHEQDG-----LKELQQITPLLL--GT--ANQLLTIDDIKSL-RE-PVSSVLIELPQ 147 (359)
T ss_dssp HHHHHHHHHTCCEEEECTTCHHHHSSTTH-----HHHHHCCEEEEC--SC--TTSCCCHHHHHTC-SS-CCSEEEEESSB
T ss_pred HHHHHHhcCCCcEEEEeccceeeehhcch-----HHHhcCceEEec--CC--cCCCcCHHHHHhc-cC-CceEEEEEecc
Confidence 89999888887 5554433322211000 012346555444 43 3468999999987 54 89999998 65
Q ss_pred C-C-CCcccHHH---HHHHHHHcCCEEEEeccchhhhcc-cCCCCCCC-CCccEEEeCCCCcCCCCCceEEEEec
Q 018401 202 A-Y-ARLYDYER---IRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 269 (356)
Q Consensus 202 n-~-g~~~~l~~---I~~la~~~g~~vivD~a~~~g~~~-~~~~~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~ 269 (356)
| + |.+.+.++ |.++|++||+++|+|++|..+... .+.....+ .++|++++|+||++++|.||+++.++
T Consensus 148 n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~ 222 (359)
T 3pj0_A 148 REIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAGND 222 (359)
T ss_dssp GGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEECH
T ss_pred cCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEECCH
Confidence 5 4 67766554 599999999999999998655421 11110000 13799999999999888777777766
No 173
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.76 E-value=3.7e-18 Score=158.61 Aligned_cols=216 Identities=12% Similarity=0.010 Sum_probs=148.4
Q ss_pred cCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC---CCCCccccCCCchHH
Q 018401 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR---LDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g---~~~~~v~v~~sgs~a 121 (356)
+.|+|..++++ +++.+++++.+.+......+|+.. ...+ +++.++++++ ++++++++++|++++
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-------~~~~----lr~~la~~~~~~~~~~~~v~~~~G~~~a 88 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDS-------PDEE----LIEKILSYLDTDFLSKNNVSVGNGADEI 88 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCS-------SCHH----HHHHHHHHHTCSSCCGGGEEEESSHHHH
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC-------chHH----HHHHHHHHcCCCCCCHHHEEEcCChHHH
Confidence 46889888774 589999999988732111123221 1334 4577888888 788888889999999
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 018401 122 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 200 (356)
Q Consensus 122 ~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~ 200 (356)
+..++.++ ||+|+++ ++|.++.. .+...|.++..+ +.+ +++.+|++++ + ++++|+++ +
T Consensus 89 l~~~~~~~---gd~Vl~~-p~y~~~~~--------~~~~~g~~~~~v--~~~-~~~~~d~~~l-----~-~~~~v~l~~p 147 (335)
T 1uu1_A 89 IYVMMLMF---DRSVFFP-PTYSCYRI--------FAKAVGAKFLEV--PLT-KDLRIPEVNV-----G-EGDVVFIPNP 147 (335)
T ss_dssp HHHHHHHS---SEEEECS-SSCHHHHH--------HHHHHTCEEEEC--CCC-TTSCCCCCCC-----C-TTEEEEEESS
T ss_pred HHHHHHHh---CCcEEEC-CCcHHHHH--------HHHHcCCeEEEe--ccC-CCCCCCHHHc-----C-CCCEEEEeCC
Confidence 99888877 8999998 88865532 233456555444 554 3456787776 3 78999876 8
Q ss_pred CC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcc--cC-CCCCCCCCccEEEeCCCCcCCCC--CceEEEEecCcchh
Q 018401 201 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA--AG-VIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEI 274 (356)
Q Consensus 201 ~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~--~~-~~~~~l~~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~ 274 (356)
+| +|.+.+.++|.++++..| ++|+|++|+..... .. +... +.++++.|++|+++.| +.|++++++
T Consensus 148 ~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~---~~~i~~~s~sK~~g~~G~r~G~~~~~~----- 218 (335)
T 1uu1_A 148 NNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKY---ENLAVIRTFSKAFSLAAQRVGYVVASE----- 218 (335)
T ss_dssp CTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTC---SSEEEEEESTTTTTCGGGCCEEEEECH-----
T ss_pred CCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhC---CCEEEEecchhhcCCcccCeEEEEeCH-----
Confidence 77 899999999999999889 99999999743211 11 1112 3679999999987422 239999866
Q ss_pred ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018401 275 NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 315 (356)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~ 315 (356)
++.+.+.....+ .+++.+..+++.++++.
T Consensus 219 ---------~~~~~l~~~~~~---~~~~~~~~~~~~~~l~~ 247 (335)
T 1uu1_A 219 ---------KFIDAYNRVRLP---FNVSYVSQMFAKVALDH 247 (335)
T ss_dssp ---------HHHHHHHHHSCT---TCSCHHHHHHHHHHHHT
T ss_pred ---------HHHHHHHHhcCC---CCcCHHHHHHHHHHhCC
Confidence 455544432211 36777777777777765
No 174
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.75 E-value=1.5e-17 Score=160.37 Aligned_cols=191 Identities=17% Similarity=0.214 Sum_probs=138.5
Q ss_pred CeeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHh
Q 018401 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTA 128 (356)
Q Consensus 49 i~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~a 128 (356)
|++ +.+.+++++++++.+.+...+ ++.+ ... .++++.+++++|++ +++++++|++++..++.+
T Consensus 34 i~~--~~~~~~~~~~~a~~~~~~~~~--------~~~~-~~~----~~l~~~la~~~g~~--~~i~~~sGt~a~~~al~~ 96 (437)
T 3bb8_A 34 VPP--SGKVIGTKELQLMVEASLDGW--------LTTG-RFN----DAFEKKLGEYLGVP--YVLTTTSGSSANLLALTA 96 (437)
T ss_dssp BCS--CCCCCCHHHHHHHHHHHHHCC--------CBSC-HHH----HHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHH
T ss_pred ccC--CCCCCCHHHHHHHHHHHHcCC--------cCCC-hHH----HHHHHHHHHHHCCC--cEEEeCCHHHHHHHHHHH
Confidence 444 455678899999998886521 1221 223 45668899999987 456688899999988888
Q ss_pred h---------cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 018401 129 L---------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 199 (356)
Q Consensus 129 l---------~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~ 199 (356)
+ +++||+|+++.++|.++..+ +...|.+++.+ +.+++++.+|+++|++++++ ++++|+++
T Consensus 97 l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~--------~~~~g~~~~~v--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 165 (437)
T 3bb8_A 97 LTSPKLGVRALKPGDEVITVAAGFPTTVNP--------TIQNGLIPVFV--DVDIPTYNVNASLIEAAVSD-KTKAIMIA 165 (437)
T ss_dssp TTCGGGGGGSCCTTCEEEECSSSCHHHHHH--------HHHTTCEEEEC--CEETTTTEECGGGHHHHCCT-TEEEEEEE
T ss_pred hhhcccccccCCCcCEEEECCCCcHHHHHH--------HHHcCCEEEEE--eccCccCCcCHHHHHHhcCC-CCeEEEEe
Confidence 8 88999999999888777543 33456555444 55533578899999999987 78998886
Q ss_pred CCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCC--CCcCCCCCceEEEEecC
Q 018401 200 ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT--HKSLRGPRGAMIFFRKG 270 (356)
Q Consensus 200 ~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~--~K~l~gp~gG~l~~~~~ 270 (356)
. ++|...++++|.++|+++|+++|+|++|+.|..+ +....+ ...|++++|+ .|.+.|+.||+++.+++
T Consensus 166 ~-~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~~-~~~d~~~~s~~~~k~l~~g~gg~~~~~~~ 235 (437)
T 3bb8_A 166 H-TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTY-DGKMAG-TFGDIGTVSFYPAKHITMGEGGAVFTQSA 235 (437)
T ss_dssp C-GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-TTEETT-SSSSEEEEECSTTSSSCCSSCEEEEESCH
T ss_pred C-CCCChhcHHHHHHHHHHcCCEEEEECccccCceE-CCeecc-cccCEEEEECcCCcCCCCCCeEEEEeCCH
Confidence 3 3566789999999999999999999999988765 322211 1257766653 44467777788888754
No 175
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.75 E-value=3.6e-18 Score=164.76 Aligned_cols=166 Identities=15% Similarity=0.047 Sum_probs=121.8
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh-cCCCCeeeecCCCCCcccCcccccccccccccceeeE
Q 018401 88 EYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 166 (356)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 166 (356)
.+..++..++++++++++|++++++++++|++.++.+++.++ +++||+|+++.++|+++..++.. .++..|++++
T Consensus 104 ~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~----~a~~~G~~v~ 179 (438)
T 1wyu_A 104 QGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRA----YLEAVGAKLL 179 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHH----HHHHTTCEEE
T ss_pred hhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHH----HHHHCCCEEE
Confidence 455677788999999999998877778878885544444443 68999999999999877644321 1223566666
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEecc-chhhhcccCCCCCCC
Q 018401 167 TMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMA-HISGLVAAGVIPSPF 243 (356)
Q Consensus 167 ~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a-~~~g~~~~~~~~~~l 243 (356)
.++ . +++.+|+++ +++ +|++|+++ + | +|.+.|+++|+++|+++|+++++|.. ++.|..... ...
T Consensus 180 ~v~--~--~~~~~d~~~----i~~-~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~-~~~-- 246 (438)
T 1wyu_A 180 TLP--L--EGGRTPLPE----VGE-EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP-GAY-- 246 (438)
T ss_dssp EEC--C--BTTBCCCCC----CCT-TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH-HHH--
T ss_pred EEc--C--cCCccCHHH----hCC-CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCC-ccC--
Confidence 664 3 235677765 555 79999988 6 6 89999999999999999999997755 656654321 112
Q ss_pred CCccEEEeCCCC-----cCCCCCceEEEEecCc
Q 018401 244 EYADVVTTTTHK-----SLRGPRGAMIFFRKGV 271 (356)
Q Consensus 244 ~~~D~~~~s~~K-----~l~gp~gG~l~~~~~~ 271 (356)
++|++++|+|| |++||+.|++++++++
T Consensus 247 -g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~ 278 (438)
T 1wyu_A 247 -GADIAVGDGQSLGLPMGFGGPHFGFLATKKAF 278 (438)
T ss_dssp -TCSEEEEECTTTTCCCGGGCSCCEEEEECGGG
T ss_pred -CCCEEEECCcccCCCccCCCCCeeEEEEcHHH
Confidence 48999999888 7788944999998864
No 176
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.75 E-value=5.4e-18 Score=160.85 Aligned_cols=206 Identities=11% Similarity=0.022 Sum_probs=137.1
Q ss_pred cCCeeecCC---C----CCcHHHHHHHHh-hhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCC--CCC--cccc
Q 018401 47 KGLELIPSE---N----FTSVSVMQAVGS-VMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPE--KWGG 114 (356)
Q Consensus 47 ~~i~L~~~~---~----~~~~~V~~a~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~--~v~v 114 (356)
+.|+|..+. + ++++.|++++.+ .+......+|+. ..+..++++++.+++.+..+. +++ ++++
T Consensus 27 ~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~------~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~ 100 (397)
T 3fsl_A 27 DKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLP------MEGLNCYRHAIAPLLFGADHPVLKQQRVATIQ 100 (397)
T ss_dssp CCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCC------TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEE
T ss_pred CeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCC------CCchHHHHHHHHHHHhcCCcccccccceEEEE
Confidence 568887772 2 234899999998 776522223332 234566776666666544442 566 6777
Q ss_pred CCCchHHHHHHH--HhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh--
Q 018401 115 SLSGSPSNFQVY--TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-- 190 (356)
Q Consensus 115 ~~sgs~a~~~~l--~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~-- 190 (356)
++|+++++..++ .+++++||+|+++.+.|.++. ..+...|.++..+++..+ +++.+|+++|++++.+
T Consensus 101 t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~--------~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~ 171 (397)
T 3fsl_A 101 TLGGSGALKVGADFLKRYFPESGVWVSDPTWENHV--------AIFAGAGFEVSTYPWYDE-ATNGVRFNDLLATLKTLQ 171 (397)
T ss_dssp ESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHH--------HHHHHTTCCEEEECCEET-TTTEECHHHHHHHHTTCC
T ss_pred cCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHH--------HHHHHcCCceEEEeeeec-cCCcCcHHHHHHHHHhCC
Confidence 999999998774 456899999999996665443 244556766766643212 4578899999999973
Q ss_pred cCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc-----CCCCC-CCCCccEEEeCCCCcCCC
Q 018401 191 FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA-----GVIPS-PFEYADVVTTTTHKSLRG 259 (356)
Q Consensus 191 ~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~-----~~~~~-~l~~~D~~~~s~~K~l~g 259 (356)
.++++++++ ++| +|.+.+ +++|+++|++||+++|+|++|+...... .+... .....++++.|.+|++ |
T Consensus 172 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~ 250 (397)
T 3fsl_A 172 AGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIF-S 250 (397)
T ss_dssp TTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTT-T
T ss_pred CCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccc-c
Confidence 256788777 777 887754 6689999999999999999986433210 00000 0112568889999976 4
Q ss_pred CCc---eEEEEe
Q 018401 260 PRG---AMIFFR 268 (356)
Q Consensus 260 p~g---G~l~~~ 268 (356)
+.| |+++..
T Consensus 251 ~~G~riG~~~~~ 262 (397)
T 3fsl_A 251 LYGERVGGLSVM 262 (397)
T ss_dssp CGGGCCEEEEEE
T ss_pred CcCCCeeEEEEe
Confidence 334 888763
No 177
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.75 E-value=3.1e-17 Score=157.29 Aligned_cols=241 Identities=13% Similarity=0.023 Sum_probs=147.8
Q ss_pred cCCeeecCC--CCC----cHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCch
Q 018401 47 KGLELIPSE--NFT----SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGS 119 (356)
Q Consensus 47 ~~i~L~~~~--~~~----~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs 119 (356)
..+++.++. +++ +|+|++++.+.+.... .+... .|. .....++++.+++++|++ +++++|++||+
T Consensus 43 ~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~-~~~-----~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ 114 (419)
T 2eo5_A 43 KYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAAN-DFY-----NIPQLELAKKLVTYSPGNFQKKVFFSNSGT 114 (419)
T ss_dssp EEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCS-CSC-----CHHHHHHHHHHHHHSSCSSCEEEEEESSHH
T ss_pred EEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--ccccc-ccC-----CHHHHHHHHHHHHhCCCCcCCEEEEeCchH
Confidence 356776655 333 7999999999886521 11111 111 233455668999999987 77888899999
Q ss_pred HHHHHHHHhhcC-CCCeeeecCCCCCcccCcccc------cccccccccceeeEEEecccCCCCCC--------------
Q 018401 120 PSNFQVYTALLK-PHDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLNESTGY-------------- 178 (356)
Q Consensus 120 ~a~~~~l~al~~-~gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~~~~~~-------------- 178 (356)
+++..+++++.. +||+|+++++.|++....... .++.+.......+..+++ + +.+.
T Consensus 115 ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~-~~~~~~~g~~~~~~~~~~ 191 (419)
T 2eo5_A 115 EAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPY--P-NPYRNPWHINGYENPSEL 191 (419)
T ss_dssp HHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECC--C-CSSSCTTCCCTTTCHHHH
T ss_pred HHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECC--C-ccccccccccccccchhh
Confidence 999988886543 499999999776543221110 011111111122444543 2 2221
Q ss_pred --CCHHHHH-HHhhh----cCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCC
Q 018401 179 --IDYDQLE-KSATL----FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSP 242 (356)
Q Consensus 179 --~d~~~l~-~~i~~----~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~ 242 (356)
+|+++|+ +++++ .++++|+++|+| +|...+ +++|.++|++||+++|+|++|+ +|..... ....+
T Consensus 192 ~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~ 271 (419)
T 2eo5_A 192 VNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFN 271 (419)
T ss_dssp HHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT
T ss_pred HHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcC
Confidence 4688999 88874 256777777654 686665 9999999999999999999997 4422110 11011
Q ss_pred CCCccEEEeCCCCcCCCC-Cc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 243 FEYADVVTTTTHKSLRGP-RG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 243 l~~~D~~~~s~~K~l~gp-~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
...|++++| |+++++ -. |+++.+++ +. .+ ...... ..+.|.++.+|..+||+.+.+
T Consensus 272 -~~~d~~t~s--K~~~~G~~riG~~~~~~~--------------~~-~~-~~~~~~-t~~~n~~~~~aa~aal~~~~~ 329 (419)
T 2eo5_A 272 -TVPDVITLA--KALGGGIMPIGATIFRKD--------------LD-FK-PGMHSN-TFGGNALACAIGSKVIDIVKD 329 (419)
T ss_dssp -CCCSEEEEC--GGGGTTTSCCEEEEEEGG--------------GC-CC--------CCCCCHHHHHHHHHHHHHHHH
T ss_pred -CCCCEEEec--ccccCCccceEEEEEchH--------------hh-cC-CcccCC-CCCCCHHHHHHHHHHHHHHHH
Confidence 136887665 988764 44 99998873 32 22 101111 124477788888888887654
No 178
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.74 E-value=5.9e-18 Score=160.83 Aligned_cols=157 Identities=15% Similarity=0.101 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 94 ESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 94 ~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
..++++++++++|.+ +.++++||++++..++.+++++||+|+++.++|+++...+.. .....|.+++.+ +.
T Consensus 61 ~~~l~~~la~~~g~~--~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~----~~~~~g~~~~~v--~~- 131 (389)
T 3acz_A 61 VEQFEEMVCSIEGAA--GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTH----WLPRFGIEVDLI--DT- 131 (389)
T ss_dssp HHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHH----HHHHTTCEEEEE--CT-
T ss_pred HHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHH----HHHHcCCEEEEE--CC-
Confidence 345668899999987 345677889999989998999999999999888776443211 023346555444 32
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEe
Q 018401 174 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 251 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~ 251 (356)
.|++++++++++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+.....+ .. ++|+++.
T Consensus 132 -----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~-~~---~~di~~~ 201 (389)
T 3acz_A 132 -----SDVEKVKAAWKP-NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPL-EL---GADIALH 201 (389)
T ss_dssp -----TCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGG-GT---TCSEEEE
T ss_pred -----CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCcc-cc---CCeEEEE
Confidence 389999999987 88999987 777 899999999999999999999999999876531111 12 3899999
Q ss_pred CCCCcCCCCCc---eEEEEec
Q 018401 252 TTHKSLRGPRG---AMIFFRK 269 (356)
Q Consensus 252 s~~K~l~gp~g---G~l~~~~ 269 (356)
|+||+++||.+ |+++.++
T Consensus 202 S~sK~~~~~~~~~~G~v~~~~ 222 (389)
T 3acz_A 202 SVSKYINGHGDVIGGVSSAKT 222 (389)
T ss_dssp ETTTTTTCSSCCCCEEEEESS
T ss_pred CChhhccCCCCceeEEEEECc
Confidence 99999988764 8888876
No 179
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.74 E-value=1.8e-17 Score=158.17 Aligned_cols=227 Identities=11% Similarity=0.028 Sum_probs=146.4
Q ss_pred hcccccccChHHHHHHHHHHHH--HHcCCeeecCCC-------CCcHHHHHHHHhhhhcc-CCCCCCCCccCCCchhHHH
Q 018401 23 LNAPLEVVDPEIADIIEHEKAR--QWKGLELIPSEN-------FTSVSVMQAVGSVMTNK-YSEGYPGARYYGGNEYIDM 92 (356)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~--~~~~i~L~~~~~-------~~~~~V~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~ 92 (356)
|.+++..++++.+..+...... .++.|+|..+.. ++++.+.+++.+.+... ...+| +...+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y------~~~~g~~~ 78 (412)
T 1ajs_A 5 VFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEY------LPILGLAE 78 (412)
T ss_dssp TTTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCC------CCTTCCHH
T ss_pred hhhhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCC------CCCCCCHH
Confidence 3455666666666555554332 235688887652 35689999998876321 11122 22234566
Q ss_pred HHHHHHHHHHHHcCC--CCCcccc--CCCchHHHHHHHH--hhcCCC-----CeeeecCCCCCcccCccccccccccccc
Q 018401 93 AESLCQKRALEAFRL--DPEKWGG--SLSGSPSNFQVYT--ALLKPH-----DRIMALDLPHGGHLSHGYQTDTKKISAV 161 (356)
Q Consensus 93 l~~~~~~~la~~~g~--~~~~v~v--~~sgs~a~~~~l~--al~~~g-----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 161 (356)
+++++.+++...+|. +++++++ ++||++++..++. .++++| |+|+++.++|.++.. .+...
T Consensus 79 lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~--------~~~~~ 150 (412)
T 1ajs_A 79 FRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNG--------VFTTA 150 (412)
T ss_dssp HHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHH--------HHHHT
T ss_pred HHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHH--------HHHHc
Confidence 665555555433333 6778988 9999999987753 457899 999999977765432 34456
Q ss_pred cee-eEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhh
Q 018401 162 SIF-FETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGL 233 (356)
Q Consensus 162 g~~-~~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~ 233 (356)
|.+ +..+++... +++.+|+++|++++.+. ++++++++ ++| +|.+.+ +++|.++|++||+++|+|++|....
T Consensus 151 g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~ 229 (412)
T 1ajs_A 151 GFKDIRSYRYWDT-EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFA 229 (412)
T ss_dssp TCSCEEEEECEET-TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTT
T ss_pred CCceeEEEeeecC-CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccc
Confidence 766 655643222 44678999999998753 46677676 777 887654 6689999999999999999975221
Q ss_pred cc--------cC-CCCCCCCCccEEEeCCCCcCCCCCc---eEEEE
Q 018401 234 VA--------AG-VIPSPFEYADVVTTTTHKSLRGPRG---AMIFF 267 (356)
Q Consensus 234 ~~--------~~-~~~~~l~~~D~~~~s~~K~l~gp~g---G~l~~ 267 (356)
.. .. +...+ ..++++.|++|.+ |+.| |++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~-~~~G~riG~~~~ 272 (412)
T 1ajs_A 230 SGNLEKDAWAIRYFVSEG--FELFCAQSFSKNF-GLYNERVGNLTV 272 (412)
T ss_dssp TSCHHHHTHHHHHHHHTT--CCEEEEEECTTTS-CCGGGCEEEEEE
T ss_pred CCcccccchHHHHHhccC--CcEEEEEeccccc-CCCCcceEEEEE
Confidence 11 11 10011 1348899999976 4444 88888
No 180
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.74 E-value=2.9e-17 Score=158.93 Aligned_cols=193 Identities=13% Similarity=0.099 Sum_probs=127.7
Q ss_pred CeeecCCC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHH
Q 018401 49 LELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVY 126 (356)
Q Consensus 49 i~L~~~~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l 126 (356)
+++.++.+ ++++.+++++... . ..|.......++ ++.+++++|.+ ++++++||++++..++
T Consensus 45 lD~~~~~~~~~~~~~~~~a~~~~-~----------~~y~~~~~~~~l----~~~la~~~~~~--~~~~~~~gt~a~~~al 107 (456)
T 2ez2_A 45 IDLLTDSGTNAMSDKQWAGMMMG-D----------EAYAGSENFYHL----ERTVQELFGFK--HIVPTHQGRGAENLLS 107 (456)
T ss_dssp EECSCSSSCCCCCHHHHHHHTTC-C----------CCSSSCHHHHHH----HHHHHHHHCCS--EEEEESSHHHHHHHHH
T ss_pred eeeccccCCccCCHHHHHHhhcc-h----------hhcccChhHHHH----HHHHHHHhCCC--cEEEeCCcHHHHHHHH
Confidence 45544443 3567888877521 1 112223344444 47888888875 5677999999999899
Q ss_pred HhhcCCCCeeeecCCCC-CcccCcccccccccccccceeeEEEecccC--CC-----CCCCCHHHHHHHhhhcCC----c
Q 018401 127 TALLKPHDRIMALDLPH-GGHLSHGYQTDTKKISAVSIFFETMPYRLN--ES-----TGYIDYDQLEKSATLFRP----K 194 (356)
Q Consensus 127 ~al~~~gd~Vl~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~-----~~~~d~~~l~~~i~~~~~----k 194 (356)
.+++++|| +++.++| +++.. .+...|.+++.++++.+ ++ ++.+|+++|++++++ ++ +
T Consensus 108 ~~l~~~gd--i~~~~~~~~~~~~--------~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~-~t~~~~~ 176 (456)
T 2ez2_A 108 QLAIKPGQ--YVAGNMYFTTTRY--------HQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDE-KGAENIA 176 (456)
T ss_dssp HHHCCTTC--EEEESSCCHHHHH--------HHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHH-HCGGGEE
T ss_pred HHhCCCCC--EeccccccchhHH--------HHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHh-cccccee
Confidence 99999999 6667666 33222 34456766655543211 11 257899999999986 55 7
Q ss_pred EEEEc-CCC--CCCccc---HHHHHHHHHHcCCEEEEeccchhh---------hcccCCCCC-----CCCCccEEEeCCC
Q 018401 195 LIVAG-ASA--YARLYD---YERIRKVCNKQKAIMLADMAHISG---------LVAAGVIPS-----PFEYADVVTTTTH 254 (356)
Q Consensus 195 ~v~l~-~~n--~g~~~~---l~~I~~la~~~g~~vivD~a~~~g---------~~~~~~~~~-----~l~~~D~~~~s~~ 254 (356)
+|+++ ++| +|.+.+ +++|.++|++||+++|+|++|+.| ....+.... .....|++++|+|
T Consensus 177 ~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~k 256 (456)
T 2ez2_A 177 YICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGK 256 (456)
T ss_dssp EEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETT
T ss_pred EEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCc
Confidence 88887 666 676665 999999999999999999999876 222221100 0012688888899
Q ss_pred CcCCCCCceEEEEec
Q 018401 255 KSLRGPRGAMIFFRK 269 (356)
Q Consensus 255 K~l~gp~gG~l~~~~ 269 (356)
|+++.|.||+++.++
T Consensus 257 k~~~~~~gG~~~~~~ 271 (456)
T 2ez2_A 257 KDCLVNIGGFLCMND 271 (456)
T ss_dssp TTTCCSSCEEEEESC
T ss_pred ccCCCCceeEEEECC
Confidence 976545578888843
No 181
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.74 E-value=4.3e-18 Score=163.72 Aligned_cols=157 Identities=16% Similarity=0.092 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 94 ESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 94 ~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
.+++++++++++|.+. .++++||++++..++.++++|||+|+++++.|++....+. ..+...|.+++.+ +.+
T Consensus 84 ~~~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G~~~~~v--~~~ 155 (430)
T 3ri6_A 84 VEDLEQRLKNLTGALG--VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQ----KTLPSFGIEVRFV--DVM 155 (430)
T ss_dssp HHHHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH----THHHHTTCEEEEE--CTT
T ss_pred HHHHHHHHHHHHCCCc--EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH----HHHHHcCCEEEEe--CCC
Confidence 3455688999999865 3557788899998999999999999999988876654221 1223346555444 332
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEe
Q 018401 174 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 251 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~ 251 (356)
|++++++++++ ++++|+++ ++| +|.+.|+++|+++|+++|+++|+|++|+.+... ..... ++|+++.
T Consensus 156 ------d~~~l~~ai~~-~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~-~~~~~---g~div~~ 224 (430)
T 3ri6_A 156 ------DSLAVEHACDE-TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLL-EAKRL---GVDIEVL 224 (430)
T ss_dssp ------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTC-CGGGG---TCSEEEE
T ss_pred ------CHHHHHHhhCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-ChHHc---CCEEEEE
Confidence 89999999987 89999987 777 899999999999999999999999999877542 22223 4899999
Q ss_pred CCCCcCCCC---CceEEEEec
Q 018401 252 TTHKSLRGP---RGAMIFFRK 269 (356)
Q Consensus 252 s~~K~l~gp---~gG~l~~~~ 269 (356)
|++|+|+|+ .||+++.+.
T Consensus 225 S~sK~l~g~g~~~gG~vv~~~ 245 (430)
T 3ri6_A 225 SSTKFISGGGTSVGGVLIDHG 245 (430)
T ss_dssp ECCCEEETTEEECCEEEEECS
T ss_pred CCcccccCCCCceEEEEEECC
Confidence 999999887 557777554
No 182
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.74 E-value=1.7e-17 Score=157.28 Aligned_cols=204 Identities=12% Similarity=0.042 Sum_probs=134.0
Q ss_pred HcCCeeecCC---C----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC--CCCCcccc--
Q 018401 46 WKGLELIPSE---N----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGG-- 114 (356)
Q Consensus 46 ~~~i~L~~~~---~----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~v~v-- 114 (356)
++.|+|..+. + ++++.+.+++.+.+......+| +...+..++++++.+++....+ ++++++++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~ 99 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNY------LGIDGIPEFGRCTQELLFGKGSALINDKRARTAQ 99 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCC------CCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEE
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCC------CCCCCCHHHHHHHHHHHhcCCCCccccccEEEEe
Confidence 3578888776 1 4569999999887654211122 2223456676555555543322 24778887
Q ss_pred CCCchHHHHHHHHhh--cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc-
Q 018401 115 SLSGSPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF- 191 (356)
Q Consensus 115 ~~sgs~a~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~- 191 (356)
++||++++..++..+ +.+||+|+++.+.|.++.. .+...|.++..+++... +++.+|+++|++++.+.
T Consensus 100 ~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~ 170 (396)
T 2q7w_A 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKS--------VFNSAGLEVREYAYYDA-ENHTLDFDALINSLNEAQ 170 (396)
T ss_dssp ESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHH--------HHHHTTCEEEEEECEET-TTTEECHHHHHHHHTTCC
T ss_pred cccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHH--------HHHHcCCceEEEecccC-CCCCcCHHHHHHHHHhCC
Confidence 999999998777665 5799999999977765432 34456766655643221 34678999999998752
Q ss_pred -CCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhc-------ccC-CCCCCCCCccEEEeCCCCcC
Q 018401 192 -RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLV-------AAG-VIPSPFEYADVVTTTTHKSL 257 (356)
Q Consensus 192 -~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~-------~~~-~~~~~l~~~D~~~~s~~K~l 257 (356)
++++++++ ++| +|.+.+ +++|.++|+++|+++|+|++|+.... +.. +...+ ..++++.|++|++
T Consensus 171 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~ 248 (396)
T 2q7w_A 171 AGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMH--KELIVASSYSXNF 248 (396)
T ss_dssp TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHC--SCEEEEEECTTTT
T ss_pred CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcC--CcEEEEEeccccc
Confidence 35677767 777 887664 66889999999999999999864221 111 10001 1458899999977
Q ss_pred CCCCc---eEEEE
Q 018401 258 RGPRG---AMIFF 267 (356)
Q Consensus 258 ~gp~g---G~l~~ 267 (356)
|+.| |++++
T Consensus 249 -~~~G~riG~~~~ 260 (396)
T 2q7w_A 249 -GLYNERVGACTL 260 (396)
T ss_dssp -TCGGGCCEEEEE
T ss_pred -cccccccceEEE
Confidence 4344 88886
No 183
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.74 E-value=3.4e-18 Score=164.03 Aligned_cols=225 Identities=14% Similarity=0.006 Sum_probs=140.6
Q ss_pred cccccccChHHHHHHHHHHHHHHcCCeeecCCCC-----CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHH
Q 018401 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (356)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~-----~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (356)
.+.+......++....+..+ +...|+|..++++ +++.+++++.+.+.... + .....|+...+..+++
T Consensus 11 ~~~l~~~~~~~~~~~~~l~~-~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~--~-~~~~~Y~~~~G~~~lr---- 82 (422)
T 3d6k_A 11 AARLAQVREEVTAKYAELKA-KNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKD--G-VDCRNYGGLLGIADIR---- 82 (422)
T ss_dssp -------CHHHHHHHHHHHH-TTCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTT--C-CBTTSSCCSSCCHHHH----
T ss_pred HHHHHhhHHHHHHHHHHHhc-cCCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhcc--c-hhhhCCCCCCCCHHHH----
Confidence 35566677888888776533 3357899888874 34466666654421000 0 0011233333445555
Q ss_pred HHHHHHcCCCCCccccCCCchHHH--HHHHHhhcCC------------CCeeeecCCCCCcccCccccccccccccccee
Q 018401 99 KRALEAFRLDPEKWGGSLSGSPSN--FQVYTALLKP------------HDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 164 (356)
Q Consensus 99 ~~la~~~g~~~~~v~v~~sgs~a~--~~~l~al~~~------------gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 164 (356)
+.+++++++++++|++|+|+++++ ..++.++..+ +|+|++.+++|.++. ..+...|.+
T Consensus 83 ~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~--------~~~~~~g~~ 154 (422)
T 3d6k_A 83 ELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHF--------TITEHFGFE 154 (422)
T ss_dssp HHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH--------HHHHHHTCE
T ss_pred HHHHHHhCCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHH--------HHHHHcCCE
Confidence 777777899988888898888876 4456666655 347999996665443 244556766
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE-Ec-CCC-CCCcccHH---HHHHHHH-HcCCEEEEeccchh-hhccc
Q 018401 165 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIV-AG-ASA-YARLYDYE---RIRKVCN-KQKAIMLADMAHIS-GLVAA 236 (356)
Q Consensus 165 ~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~-l~-~~n-~g~~~~l~---~I~~la~-~~g~~vivD~a~~~-g~~~~ 236 (356)
++.++ .+ ++ .+|+++|++++++.++++|+ ++ ++| +|.+.+.+ +|.++|+ ++|+++|+|++|+. +....
T Consensus 155 ~~~v~--~~-~~-g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~ 230 (422)
T 3d6k_A 155 MINVP--MT-DE-GPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDE 230 (422)
T ss_dssp EEEEE--EE-TT-EECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSC
T ss_pred EEecC--CC-CC-CCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCC
Confidence 66564 44 22 38999999999754688888 45 677 89888766 7777777 89999999999974 22111
Q ss_pred CCCCCC---------CCCccEEEeCCCCcCCCC--CceEEEEec
Q 018401 237 GVIPSP---------FEYADVVTTTTHKSLRGP--RGAMIFFRK 269 (356)
Q Consensus 237 ~~~~~~---------l~~~D~~~~s~~K~l~gp--~gG~l~~~~ 269 (356)
+....+ ..+.++++.|++|+ .+| +.|+++.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~~ 273 (422)
T 3d6k_A 231 FPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASSK 273 (422)
T ss_dssp CCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECCH
T ss_pred CCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeCH
Confidence 100001 11357899999997 443 349999876
No 184
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.74 E-value=2.7e-17 Score=153.57 Aligned_cols=219 Identities=11% Similarity=0.014 Sum_probs=149.2
Q ss_pred HcCCeeecCCCC--CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHH
Q 018401 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNF 123 (356)
Q Consensus 46 ~~~i~L~~~~~~--~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~ 123 (356)
++.|+|..++++ +++.|++++.+.+.... +|+.. .. . ++++++++++|++++++++++|+++++.
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~------~~-~----~lr~~la~~~~~~~~~i~~t~g~~~al~ 81 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENLNCIR--HYPEP------DA-G----TLRQMLAKRNSVDNNAILVTNGPTAAFY 81 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTGGGGG--SCCCT------TC-H----HHHHHHHHHTTCCGGGEEEESHHHHHHH
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhHhHHh--cCCCC------cH-H----HHHHHHHHHhCcCHHHEEEcCCHHHHHH
Confidence 567899888775 48999999998874322 34433 11 2 4568999999998888888999999999
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEeccc-CCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 018401 124 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL-NESTGYIDYDQLEKSATLFRPKLIVAG-AS 201 (356)
Q Consensus 124 ~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~ 201 (356)
.++.++. ||+|+++.++|.++. ..+...|.+++.+ +. + +...+++ + ++++|+++ ++
T Consensus 82 ~~~~~l~--gd~Vi~~~p~~~~~~--------~~~~~~g~~~~~v--~~~~-~~~~~~~--------~-~~~~v~i~~p~ 139 (350)
T 3fkd_A 82 QIAQAFR--GSRSLIAIPSFAEYE--------DACRMYEHEVCFY--PSNE-DIGEADF--------S-NMDFCWLCNPN 139 (350)
T ss_dssp HHHHHTT--TCEEEEEESCCHHHH--------HHHHHTTCEEEEE--ETTS-CGGGSCC--------T-TCSEEEEESSC
T ss_pred HHHHHHC--CCEEEEeCCCcHHHH--------HHHHHcCCeEEEE--ecCC-ccccCcc--------C-CCCEEEEeCCC
Confidence 8888877 999999996665543 2444567666555 44 3 2223333 3 78998887 77
Q ss_pred C-CCCcccHHHHHHHHHHcC-CEEEEeccchhhhcccCCCCCC--CCCccEEEeCCCCcCC--CCCceEEEEecCcchhc
Q 018401 202 A-YARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIPSP--FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEIN 275 (356)
Q Consensus 202 n-~g~~~~l~~I~~la~~~g-~~vivD~a~~~g~~~~~~~~~~--l~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~ 275 (356)
| +|.+.++++|.++++.++ .++|+|++|+............ ..+.++++.|++|+++ |.+.|+++.++
T Consensus 140 nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~------ 213 (350)
T 3fkd_A 140 NPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK------ 213 (350)
T ss_dssp TTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH------
T ss_pred CCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCH------
Confidence 7 899999999999998876 7999999986432211110001 1135689999999875 33348888865
Q ss_pred cCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 276 KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
++.+.+.... ...+++.+..+++.++++..
T Consensus 214 --------~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~ 243 (350)
T 3fkd_A 214 --------DFMKRVAAFS---TPWAVNALAIEAAKFILIHP 243 (350)
T ss_dssp --------HHHHHHHTTC---CTTCSCHHHHHHHHHHHHCT
T ss_pred --------HHHHHHHHhC---CCCCCCHHHHHHHHHHHhCH
Confidence 5555554432 12466777777776777643
No 185
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.73 E-value=6e-18 Score=162.49 Aligned_cols=223 Identities=11% Similarity=-0.025 Sum_probs=140.4
Q ss_pred cccccChHHHHHHHHHHHHHHcCCeeecCCCCC-----cHHHHHHH--HhhhhccCCCCCCCCccCCCchhHHHHHHHHH
Q 018401 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENFT-----SVSVMQAV--GSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (356)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~-----~~~V~~a~--~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (356)
.+....+.....+.+. +.....|+|..+.... ++.+.+++ .+.+... ......|+...+..+++
T Consensus 14 ~~~~~~~~~~~~~~~~-~~~~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~Y~~~~g~~~lr---- 84 (427)
T 3ppl_A 14 RIGLFHEDIKRKFDEL-KSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAAD----GTDVRNYGGLDGIVDIR---- 84 (427)
T ss_dssp HHHHHHHHHHHHHHHH-HHTCCCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTT----SCBTTSSCCSSCCHHHH----
T ss_pred HHHHhHHHHHHHHHHh-hcCCceEecCCCCCChHHCCCcHHHHHHhhhHHHhhcc----chhhcCCCCCCCcHHHH----
Confidence 3334444444444432 2334567887665432 12344444 3333221 11122344334455555
Q ss_pred HHHHHHcCCCCCccccCCCchHHH--HHHHHhhcC--C----------CCeeeecCCCCCcccCccccccccccccccee
Q 018401 99 KRALEAFRLDPEKWGGSLSGSPSN--FQVYTALLK--P----------HDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 164 (356)
Q Consensus 99 ~~la~~~g~~~~~v~v~~sgs~a~--~~~l~al~~--~----------gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 164 (356)
+.++++++++++++++|+|+++++ ..++.++++ | ||+|++.+++|.++. ..+...|.+
T Consensus 85 ~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~--------~~~~~~g~~ 156 (427)
T 3ppl_A 85 QIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHF--------SITERFGFE 156 (427)
T ss_dssp HHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH--------HHHHHTTCE
T ss_pred HHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHH--------HHHHHcCCE
Confidence 777777899988888899999888 467788776 6 999999996665443 244566766
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc--CCC-CCCcccHH---HHHHHH-HHcCCEEEEeccchhhhcccC
Q 018401 165 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--ASA-YARLYDYE---RIRKVC-NKQKAIMLADMAHISGLVAAG 237 (356)
Q Consensus 165 ~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~--~~n-~g~~~~l~---~I~~la-~~~g~~vivD~a~~~g~~~~~ 237 (356)
++.+ +++ ++ .+|+++|+++++..++++|+++ ++| +|.+.+.+ +|.++| ++||+++|+|++|+.......
T Consensus 157 ~~~v--~~~-~~-g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~ 232 (427)
T 3ppl_A 157 MISV--PMN-ED-GPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDE 232 (427)
T ss_dssp EEEE--EEE-TT-EECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSC
T ss_pred EEEe--CCC-CC-CCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCC
Confidence 6555 444 23 3899999999953478998875 467 89888776 888888 999999999999864322111
Q ss_pred C-CC---C------CCCCccEEEeCCCCcCCC-CCceEEEEec
Q 018401 238 V-IP---S------PFEYADVVTTTTHKSLRG-PRGAMIFFRK 269 (356)
Q Consensus 238 ~-~~---~------~l~~~D~~~~s~~K~l~g-p~gG~l~~~~ 269 (356)
- .. . ...+.++++.|++|++++ .+.|+++.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~ 275 (427)
T 3ppl_A 233 FPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSA 275 (427)
T ss_dssp CCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCH
T ss_pred CCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCH
Confidence 0 00 0 011367899999998433 2338888876
No 186
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.73 E-value=1.8e-17 Score=157.15 Aligned_cols=202 Identities=13% Similarity=0.105 Sum_probs=132.3
Q ss_pred cCCeeecCCC-------CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCcccc--CCC
Q 018401 47 KGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGG--SLS 117 (356)
Q Consensus 47 ~~i~L~~~~~-------~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v--~~s 117 (356)
+.|+|..+.. ++++.+.+++.+.+......+|+ ...+..++++++.+++... +.+++++++ ++|
T Consensus 27 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~lr~~la~~~~~~-~~~~~~v~~~~~~g 99 (394)
T 2ay1_A 27 GKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYA------GLSGEPEFQKAMGELILGD-GLKSETTATLATVG 99 (394)
T ss_dssp TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCC------CSSCCHHHHHHHHHHHHGG-GCCGGGEEEEEEEH
T ss_pred cccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCC------CCCCcHHHHHHHHHHHhCC-CCCcccEEEEecCC
Confidence 5688887762 35799999998876541111232 2233456665444444211 226778888 999
Q ss_pred chHHHHHHHHhhc--CCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc--CC
Q 018401 118 GSPSNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RP 193 (356)
Q Consensus 118 gs~a~~~~l~al~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~--~~ 193 (356)
|++++..++.++. .+||+|+++.++|.++.. .+...|.++..+++... +++.+|++++++++++. ++
T Consensus 100 ~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~ 170 (394)
T 2ay1_A 100 GTGALRQALELARMANPDLRVFVSDPTWPNHVS--------IMNFMGLPVQTYRYFDA-ETRGVDFEGMKADLAAAKKGD 170 (394)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH--------HHHHHTCCEEEEECEET-TTTEECHHHHHHHHHTCCTTC
T ss_pred chhHHHHHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCCceEEEecccc-cCCccCHHHHHHHHHhCCCCC
Confidence 9999998877764 499999999976655432 34456766666654321 34678999999998752 25
Q ss_pred cEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhc-------ccC-CCCCCCCCccEEEeCCCCcCCCC
Q 018401 194 KLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLV-------AAG-VIPSPFEYADVVTTTTHKSLRGP 260 (356)
Q Consensus 194 k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~-------~~~-~~~~~l~~~D~~~~s~~K~l~gp 260 (356)
++++++ ++| +|.+.+ +++|.++|+++|+++|+|++|+.... +.. +...+ ..++++.|++|+++ +
T Consensus 171 ~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~-~ 247 (394)
T 2ay1_A 171 MVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRI--PEVLIAASCSKNFG-I 247 (394)
T ss_dssp EEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHC--SSEEEEEECTTTTT-C
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcC--CCEEEEEeccCCCc-C
Confidence 666666 777 887765 56789999999999999999974322 111 11111 12477889999774 3
Q ss_pred Cc---eEEEE
Q 018401 261 RG---AMIFF 267 (356)
Q Consensus 261 ~g---G~l~~ 267 (356)
.| |++++
T Consensus 248 ~G~riG~~~~ 257 (394)
T 2ay1_A 248 YRERTGCLLA 257 (394)
T ss_dssp GGGCEEEEEE
T ss_pred cCCccceEEE
Confidence 34 88887
No 187
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.73 E-value=4e-17 Score=157.27 Aligned_cols=242 Identities=12% Similarity=0.074 Sum_probs=145.4
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCC-CccccCCCchH
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP-EKWGGSLSGSP 120 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~-~~v~v~~sgs~ 120 (356)
..+++.++.. ..+|.|++++.+.+.... .+... .+..++..+++++++++++... ++++|++||++
T Consensus 44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~------~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggse 115 (439)
T 3dxv_A 44 ELIDLSGAWGAASLGYGHPAIVAAVSAAAANPA--GATIL------SASNAPAVTLAERLLASFPGEGTHKIWFGHSGSD 115 (439)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCS--CSCSS------SSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHH
T ss_pred EEEECCCchhhccCCCCCHHHHHHHHHHHHhcc--Ccccc------ccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHH
Confidence 3567765554 158999999999887621 12111 1223555677799999997765 57788999999
Q ss_pred HHHHHHHhh--cCCCCeeeecCCCCCcccCcccccc-------cccccccceeeEEEecccCCCCCCC-----CHHHHHH
Q 018401 121 SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTD-------TKKISAVSIFFETMPYRLNESTGYI-----DYDQLEK 186 (356)
Q Consensus 121 a~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~v~~~~~~~~~~~-----d~~~l~~ 186 (356)
++..++.++ ..+++.|++.++.|.+......... +.........+..+ +.+ ..+.. |+++|++
T Consensus 116 a~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~d~~~le~ 192 (439)
T 3dxv_A 116 ANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPD--PYR-PYRNDPTGDAILTLLTE 192 (439)
T ss_dssp HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCC--SSS-CBTTBTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEc--CCC-cccccccHHHHHHHHHH
Confidence 999888875 3466778877766544322111000 00000000001112 221 11112 6899999
Q ss_pred Hhh---hcCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCC
Q 018401 187 SAT---LFRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTT 253 (356)
Q Consensus 187 ~i~---~~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~ 253 (356)
++. ..++++|++++++ +|.+.+ +++|.++|++||+++|+|++|+ |....+. ...+ ...|++++|
T Consensus 193 ~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-g~g~~g~~~~~~~~~-~~~di~s~s- 269 (439)
T 3dxv_A 193 KLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKV-GLARSGRLHCFEHEG-FVPDILVLG- 269 (439)
T ss_dssp HHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-CTTTTSSSSGGGGTT-CCCSEEEEC-
T ss_pred HHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhcC-CCCCEEEEc-
Confidence 983 3267788887433 577777 9999999999999999999996 3211110 1111 126888555
Q ss_pred CCcCCC-CCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 254 HKSLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 254 ~K~l~g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
|++++ .+.|+++.++ ++.+.+........+ .+....++..++++.+.++
T Consensus 270 -K~~~~G~riG~~~~~~--------------~~~~~~~~~~~~~t~--~~~~~~~aa~aal~~~~~~ 319 (439)
T 3dxv_A 270 -KGLGGGLPLSAVIAPA--------------EILDCASAFAMQTLH--GNPISAAAGLAVLETIDRD 319 (439)
T ss_dssp -GGGGTTSCCEEEEEEH--------------HHHTSCSSSSCCTTT--TCHHHHHHHHHHHHHHHHT
T ss_pred -chhcCCcceEEEEECH--------------HHHhhhcCCCcCCCc--ccHHHHHHHHHHHHHHHhc
Confidence 98864 3348888887 455544432111222 5667777777888877653
No 188
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.73 E-value=3.7e-16 Score=151.16 Aligned_cols=253 Identities=11% Similarity=-0.014 Sum_probs=149.9
Q ss_pred CCeeecC--CCC---CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHH
Q 018401 48 GLELIPS--ENF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 48 ~i~L~~~--~~~---~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~ 122 (356)
.|++.++ .++ .+|+|++++.+.+.... +... ....+...+++++++++++.+.+ ++|++||++++
T Consensus 51 ~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~---~~~~------~~~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~ 120 (452)
T 3n5m_A 51 YLDGMSGLWCVNSGYGRKELAEAAYKQLQTLS---YFPM------SQSHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEAN 120 (452)
T ss_dssp EEETTHHHHTCTTCBCCHHHHHHHHHHHTTCC---CCCT------TSEEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHH
T ss_pred EEECCcchhhccCCCCCHHHHHHHHHHHHhcC---Cccc------ccCCHHHHHHHHHHHHhCCCCce-EEEeCchHHHH
Confidence 4666544 122 47999999999887521 1111 11234555677999999988766 77799999999
Q ss_pred HHHHHhhc-----C---CCCeeeecCCCCCcccCccccc-----ccccccccceeeEEEecccCCCCCCCC---------
Q 018401 123 FQVYTALL-----K---PHDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYID--------- 180 (356)
Q Consensus 123 ~~~l~al~-----~---~gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~d--------- 180 (356)
..+++.+. . ++|+|++.++.|.+........ .+....-.......++.+.......-|
T Consensus 121 ~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (452)
T 3n5m_A 121 ETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVEC 200 (452)
T ss_dssp HHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHH
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHH
Confidence 98888876 5 7899999987776542110000 000000000012223221110000112
Q ss_pred HHHHHHHhh---hcCCcEEEEcCC--CCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccE
Q 018401 181 YDQLEKSAT---LFRPKLIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADV 248 (356)
Q Consensus 181 ~~~l~~~i~---~~~~k~v~l~~~--n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~ 248 (356)
+++|+++++ ..++++|+++++ |+|.+.+ +++|.++|++||+++|+|++|+ +|..... ....+. ..|+
T Consensus 201 ~~~le~~l~~~~~~~~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~-~~di 279 (452)
T 3n5m_A 201 VKEVDRVMTWELSETIAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDV-KPDI 279 (452)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSE
T ss_pred HHHHHHHHHhcCCCCEEEEEEccccCCCCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCC-CCCE
Confidence 899999987 236778888743 5776665 9999999999999999999986 3322110 111110 2688
Q ss_pred EEeCCCCcCCCC-Cc-eEEEEecCcchhccCCcchhhhHHHhhcc----c-cCCCCCCCCcHHHHHHHHHHHHHHhcccc
Q 018401 249 VTTTTHKSLRGP-RG-AMIFFRKGVKEINKQGKEVFYDYEEKINQ----A-VFPGLQGGPHNHTITGLAVALKQVCTLIT 321 (356)
Q Consensus 249 ~~~s~~K~l~gp-~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~----~-~~~~~~gt~~~~~~~al~~Al~~~~~~~~ 321 (356)
+++| |+++++ .. |+++.++ ++.+.+.. . ...+...+.+.++.++..++|+.+.++.-
T Consensus 280 ~t~s--K~l~~G~~~ig~~~~~~--------------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 343 (452)
T 3n5m_A 280 ITMA--KGITSAYLPLSATAVKR--------------EIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENL 343 (452)
T ss_dssp EEEC--GGGGTTSSCCEEEEEEH--------------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTH
T ss_pred Eeec--ccccCCCcceEEEEECH--------------HHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 8776 988653 33 8888887 55555532 1 11112234466777777788988765432
Q ss_pred cchhhc
Q 018401 322 FSHIHV 327 (356)
Q Consensus 322 ~~~~~~ 327 (356)
.+++++
T Consensus 344 ~~~~~~ 349 (452)
T 3n5m_A 344 IERSAQ 349 (452)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 334443
No 189
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.73 E-value=1.9e-17 Score=158.97 Aligned_cols=157 Identities=15% Similarity=0.129 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC
Q 018401 94 ESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 173 (356)
Q Consensus 94 ~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 173 (356)
.+++++.+++++|.+. .+++++|++++..++.+++++||+|+++.++|+++..++... ....|.+++.++ +.+
T Consensus 60 ~~~l~~~la~~~g~~~--~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~----~~~~g~~~~~~~-~~~ 132 (421)
T 2ctz_A 60 VDVLEKRLAALEGGKA--ALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVT----LKRLGIEVRFTS-REE 132 (421)
T ss_dssp HHHHHHHHHHHHTCSE--EEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTH----HHHTTCEEEECC-TTC
T ss_pred HHHHHHHHHHHhCCCc--eEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHH----HHHcCCEEEEEC-CCC
Confidence 3456688999999873 245667799999899988999999999999998776544211 123454443330 222
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccc-hhhhcccCCCCCCCCCccEEE
Q 018401 174 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAH-ISGLVAAGVIPSPFEYADVVT 250 (356)
Q Consensus 174 ~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~-~~g~~~~~~~~~~l~~~D~~~ 250 (356)
|++++++++++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++| +.|... ..... ++|+++
T Consensus 133 ------d~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~-~~~~~---~~Di~~ 201 (421)
T 2ctz_A 133 ------RPEEFLALTDE-KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLL-RPLAW---GAALVT 201 (421)
T ss_dssp ------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSC-CGGGG---TCSEEE
T ss_pred ------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccC-Ccccc---CCeEEE
Confidence 89999999987 89999987 777 899999999999999999999999999 877421 11122 489999
Q ss_pred eCCCCcCCCCCc--eEEEEe
Q 018401 251 TTTHKSLRGPRG--AMIFFR 268 (356)
Q Consensus 251 ~s~~K~l~gp~g--G~l~~~ 268 (356)
+|+||++++|.+ |.+++.
T Consensus 202 ~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 202 HSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp EETTTTTTCSSCCCCEEEEE
T ss_pred ECCcccccCCCCcEEEEEEe
Confidence 999999988653 545553
No 190
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.73 E-value=4.2e-17 Score=155.07 Aligned_cols=220 Identities=14% Similarity=0.057 Sum_probs=141.9
Q ss_pred HHHHHHHHHHHHHH-cCCeeecCCC--C-----CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHH
Q 018401 33 EIADIIEHEKARQW-KGLELIPSEN--F-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (356)
Q Consensus 33 ~~~~~~~~~~~~~~-~~i~L~~~~~--~-----~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~ 104 (356)
.++.......+... +.|+|..+.. + +.+.+.+++.+........+|+ ...+..++++++++++.+.
T Consensus 14 ~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~~~~~ 87 (401)
T 7aat_A 14 PILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYL------PIAGLADFTRASAELALGE 87 (401)
T ss_dssp HHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCC------CTTCCHHHHHHHHHHHHCT
T ss_pred hhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCC------CCCCCHHHHHHHHHHhcCC
Confidence 34555544332222 3588876652 1 2356888887766531222333 2244567887777777766
Q ss_pred cCC--CCCcccc--CCCchHHHHHHHHhh---cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCC
Q 018401 105 FRL--DPEKWGG--SLSGSPSNFQVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 177 (356)
Q Consensus 105 ~g~--~~~~v~v--~~sgs~a~~~~l~al---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 177 (356)
+|. +++++++ |+||++++..++.++ ++|||+|++++++|.++.. .+...|.++..+++... +++
T Consensus 88 ~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~~~~~~~~~~~-~~~ 158 (401)
T 7aat_A 88 NSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTP--------IFRDAGLQLQAYRYYDP-KTC 158 (401)
T ss_dssp TCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEET-TTT
T ss_pred CccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHH--------HHHHcCCeeEeeeeecc-ccC
Confidence 664 4778876 899999988776655 4899999999977765543 34456766666654322 357
Q ss_pred CCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCcc---cHHHHHHHHHHcCCEEEEeccchhhhcc-c--C---CCC-CCC
Q 018401 178 YIDYDQLEKSATL--FRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVA-A--G---VIP-SPF 243 (356)
Q Consensus 178 ~~d~~~l~~~i~~--~~~k~v~l~-~~n-~g~~~---~l~~I~~la~~~g~~vivD~a~~~g~~~-~--~---~~~-~~l 243 (356)
.+|++++++.+.+ .++++++++ ++| ||.+. ++++|+++|++||+++|+|++|...... . + +.. ...
T Consensus 159 ~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 238 (401)
T 7aat_A 159 SLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQ 238 (401)
T ss_dssp EECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT
T ss_pred ccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhc
Confidence 8999988877753 267888887 777 88554 4778899999999999999997532221 0 0 000 000
Q ss_pred CCccEEEeCCCCcCCCCCc---eEEEEe
Q 018401 244 EYADVVTTTTHKSLRGPRG---AMIFFR 268 (356)
Q Consensus 244 ~~~D~~~~s~~K~l~gp~g---G~l~~~ 268 (356)
....+++.|+||.++ ++| |++++.
T Consensus 239 ~~~~i~~~S~sK~~~-~~G~RiG~l~~~ 265 (401)
T 7aat_A 239 GIDVVLSQSYAKNMG-LYGERAGAFTVI 265 (401)
T ss_dssp TCCCEEEEECTTTSC-CGGGCEEEEEEE
T ss_pred CCcEEEEecCCcccc-cccCceEEEEEE
Confidence 124689999999763 334 888763
No 191
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.73 E-value=1e-16 Score=152.22 Aligned_cols=235 Identities=12% Similarity=0.080 Sum_probs=146.7
Q ss_pred cCCeeecC--CCC---CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPS--ENF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~--~~~---~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..+++.++ .++ .+|+|++++.+.+.... .++ .. + ..+..+++++++++++| ++++++++||+++
T Consensus 37 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~--~~-~-----~~~~~~~l~~~la~~~~--~~~v~~~~gg~ea 105 (395)
T 3nx3_A 37 KYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLL-HTS--NL-Y-----YNENIAAAAKNLAKASA--LERVFFTNSGTES 105 (395)
T ss_dssp EEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCS-CCC--TT-S-----BCHHHHHHHHHHHHHHT--CSEEEEESSHHHH
T ss_pred EEEECCCcHHhccCCCCCHHHHHHHHHHHHhcc-ccc--cc-c-----CCHHHHHHHHHHHHhcC--CCeEEEeCCHHHH
Confidence 45676655 333 47999999999886521 111 11 1 12445567789999887 4567779999999
Q ss_pred HHHHHHhhc-------CCCCeeeecCCCCCcccCccccc-----ccccccccceeeEEEecccCCCCCCCCHHHHHHHhh
Q 018401 122 NFQVYTALL-------KPHDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 189 (356)
Q Consensus 122 ~~~~l~al~-------~~gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~ 189 (356)
+..++.++. .++|+|++.++.|++........ ++......+..+..+ +. .|+++|+++++
T Consensus 106 ~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~d~~~l~~~l~ 177 (395)
T 3nx3_A 106 IEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFA--KY------NDISSVEKLVN 177 (395)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEE--CT------TCHHHHHTTCC
T ss_pred HHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEe--CC------CCHHHHHHhcc
Confidence 998887764 46899999988776543211110 000000111122222 22 27999999997
Q ss_pred hcCCcEEEEcC-C-CCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCCCCcCCCC
Q 018401 190 LFRPKLIVAGA-S-AYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGP 260 (356)
Q Consensus 190 ~~~~k~v~l~~-~-n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~~K~l~gp 260 (356)
+ ++++|++.+ + ++|...+ +++|.++|++||+++|+|++|+ +|..... ....+ ...|++++| |+++++
T Consensus 178 ~-~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~-~~~d~~t~s--K~~~~G 253 (395)
T 3nx3_A 178 E-KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQ-ILPDIMTSA--KALGCG 253 (395)
T ss_dssp T-TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSEEEEC--GGGTTT
T ss_pred C-CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcC-CCCCEEEec--ccccCC
Confidence 6 788888863 3 3666666 9999999999999999999986 4322110 11111 026888776 988654
Q ss_pred Cc-eEEEEecCcchhccCCcchhhhH-HHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 261 RG-AMIFFRKGVKEINKQGKEVFYDY-EEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 261 ~g-G~l~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
.+ |+++.++ ++ .+.+....... ..+.+.+..++..++++.+.++
T Consensus 254 ~~~G~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~~~aa~aal~~~~~~ 299 (395)
T 3nx3_A 254 LSVGAFVINQ--------------KVASNSLEAGDHGS-TYGGNPLVCAGVNAVFEIFKEE 299 (395)
T ss_dssp SCCEEEEECH--------------HHHHHHSCTTCCSS-CBSCCHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEch--------------hhhhhhcCCcccCC-CCCCCHHHHHHHHHHHHHHHhh
Confidence 34 8888877 45 55554322111 2345667777777888877543
No 192
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.73 E-value=1.5e-17 Score=155.64 Aligned_cols=197 Identities=13% Similarity=0.083 Sum_probs=127.0
Q ss_pred eeecCCCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh
Q 018401 50 ELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL 129 (356)
Q Consensus 50 ~L~~~~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al 129 (356)
-|..+.+|..+++++++.+.+.. ..+...|+......++ ++++++++|.+.. ++++||++++..++.++
T Consensus 14 ~l~~~~~p~~~~~~~~~~~~~~~-----~~~~~~y~~~~~~~~l----~~~la~~~~~~~~--i~~~~G~~a~~~al~~~ 82 (357)
T 3lws_A 14 GQISGHGKRNVGVLKTAFAAVAD-----EMASDQYGTGAIIEPF----EQKFADVLGMDDA--VFFPSGTMAQQVALRIW 82 (357)
T ss_dssp EESSBSSCCBHHHHHHHHTTSCT-----TCBCEETTEETTHHHH----HHHHHHHHTCSEE--EEESCHHHHHHHHHHHH
T ss_pred ccccCCCCCCHHHHHHHHHHhhc-----ccCcccccCChHHHHH----HHHHHHHhCCCcE--EEecCcHHHHHHHHHHH
Confidence 45566667777776666543211 1112233333344444 4888999998543 45678888888888998
Q ss_pred cCCCC--eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-C-C
Q 018401 130 LKPHD--RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-Y-A 204 (356)
Q Consensus 130 ~~~gd--~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~-g 204 (356)
+.+|| .|++++..|.+...... .....|..+ ++++. +++.+|+++|+++. ++++|+++ ++| + |
T Consensus 83 ~~~gd~~~vi~~~~~~~~~~~~~~-----~~~~~g~~~--~~v~~--~~~~~d~~~l~~~~---~~~~v~~~~p~np~~G 150 (357)
T 3lws_A 83 SDETDNRTVAYHPLCHLEIHEQDG-----LKELHPIET--ILVGA--ADRLMTLDEIKALP---DIACLLLELPQREIGG 150 (357)
T ss_dssp HHHHTCCEEEECTTCHHHHSSTTH-----HHHHSSCEE--EECSC--TTSCCCHHHHHTCC---SCSEEEEESSBGGGTS
T ss_pred hhcCCCcEEEecccceeeeeccch-----hhhccCcEE--EEecC--CCCCcCHHHHhcCc---CcceEEEEcccccCCc
Confidence 88988 67766655443322110 122335444 43342 44679999998872 48999888 666 5 7
Q ss_pred Cccc---HHHHHHHHHHcCCEEEEeccchhhhcc-cCCCCCCC-CCccEEEeCCCCcCCCCCceEEEEec
Q 018401 205 RLYD---YERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 269 (356)
Q Consensus 205 ~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~-~~~~~~~l-~~~D~~~~s~~K~l~gp~gG~l~~~~ 269 (356)
.+.+ +++|.++|++||++||+|++|..+... .+.....+ .++|++++|+||+++||.||+++.++
T Consensus 151 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~ 220 (357)
T 3lws_A 151 VAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPA 220 (357)
T ss_dssp BCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECH
T ss_pred eeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCH
Confidence 6664 889999999999999999998632211 11100000 23789999999999899888888776
No 193
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.73 E-value=9.1e-17 Score=155.93 Aligned_cols=245 Identities=12% Similarity=-0.008 Sum_probs=146.2
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK------ 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~------ 131 (356)
.+|.|++++.+.+.... ..+... .+..+...+++++++++++.+.++++|++||++++..+++++..
T Consensus 68 ~~p~v~~A~~~~~~~~~-~~~~~~------~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g 140 (460)
T 3gju_A 68 GRQKIADAIATQAKNLA-YYHAYV------GHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLG 140 (460)
T ss_dssp CCHHHHHHHHHHHHHHS-CCCCCT------TCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcc-cccccc------ccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcC
Confidence 47999999998876521 112111 11224455677999999887777888899999999988888763
Q ss_pred --CCCeeeecCCCCCcccCcc-----cccccccccccceeeEEEeccc--CCCCCCCC--------HHHHHHHhhh---c
Q 018401 132 --PHDRIMALDLPHGGHLSHG-----YQTDTKKISAVSIFFETMPYRL--NESTGYID--------YDQLEKSATL---F 191 (356)
Q Consensus 132 --~gd~Vl~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~d--------~~~l~~~i~~---~ 191 (356)
+++.|++.++.|.+..... ...++.........+..++++. ..++...+ +++|++++.+ .
T Consensus 141 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~ 220 (460)
T 3gju_A 141 RPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPE 220 (460)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGG
T ss_pred CCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCC
Confidence 5689999887765543111 0011111111111233343222 10111223 6888888863 2
Q ss_pred CCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCCCCcCCCC--
Q 018401 192 RPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGP-- 260 (356)
Q Consensus 192 ~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~~K~l~gp-- 260 (356)
++++|++.+.+ .|...+ +++|.++|++||+++|+|++|+ +|..... ....+. ..|++++| |+|+|+
T Consensus 221 ~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~l~gG~~ 297 (460)
T 3gju_A 221 TIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGI-KPDLITIA--KGLTSAYA 297 (460)
T ss_dssp GEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSS
T ss_pred CEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeeee--hhhcCCCC
Confidence 56788887544 455454 9999999999999999999987 4322100 000010 26888876 999763
Q ss_pred CceEEEEecCcchhccCCcchhhhHHHhhcc------ccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 261 RGAMIFFRKGVKEINKQGKEVFYDYEEKINQ------AVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 261 ~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
+.|+++.++ ++.+.+.. ........+.+.+..+|..++|+.+.++.-.++.+
T Consensus 298 ~lg~v~~~~--------------~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 355 (460)
T 3gju_A 298 PLSGVIVAD--------------RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAG 355 (460)
T ss_dssp CCEEEEEEH--------------HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CeEEEEECH--------------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHH
Confidence 448888887 45555531 11112223446667777778898876543233343
No 194
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.72 E-value=3.2e-17 Score=155.95 Aligned_cols=222 Identities=14% Similarity=0.108 Sum_probs=141.4
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK------ 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~------ 131 (356)
.+|.+.+++.+.+.... .+. . .+. .+...++++++++++|.+ ++++++||++++..++.+++.
T Consensus 56 ~~p~v~~a~~~~~~~~~--~~~-~-~~~-----~~~~~~l~~~la~~~~~~--~v~~~~gg~~a~~~al~~~~~~~~~~~ 124 (406)
T 4adb_A 56 AHPELREALNEQASKFW--HTG-N-GYT-----NEPVLRLAKKLIDATFAD--RVFFCNSGAEANEAALKLARKFAHDRY 124 (406)
T ss_dssp TCHHHHHHHHHHHTTCS--CCC-T-TSC-----CHHHHHHHHHHHHHSSCS--EEEEESSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcc--ccc-C-CcC-----CHHHHHHHHHHHhhCCCC--eEEEeCcHHHHHHHHHHHHHHHHHhcC
Confidence 48999999999887522 111 1 111 133456779999999865 677799999999988887754
Q ss_pred -CC-CeeeecCCCCCcccCccccccccc-----ccccceeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-C
Q 018401 132 -PH-DRIMALDLPHGGHLSHGYQTDTKK-----ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-Y 203 (356)
Q Consensus 132 -~g-d~Vl~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n-~ 203 (356)
+| |+|++.++.|.+............ ..-.+..+..+ +. .|+++|++++++ ++++|+++|+| +
T Consensus 125 ~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~d~~~l~~~l~~-~~~~v~~~p~np~ 195 (406)
T 4adb_A 125 GSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHA--AY------NDINSASALIDD-STCAVIVEPIQGE 195 (406)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEE--CT------TCHHHHHTTCST-TEEEEEECSEETT
T ss_pred CCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEe--CC------CcHHHHHHHhcC-CeEEEEEeCCcCC
Confidence 66 999999987766532211110000 00001112222 21 379999999886 89999999666 5
Q ss_pred CC-----cccHHHHHHHHHHcCCEEEEeccchhhhcccCCC----CCCCCCccEEEeCCCCcCCCC-CceEEEEecCcch
Q 018401 204 AR-----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHKSLRGP-RGAMIFFRKGVKE 273 (356)
Q Consensus 204 g~-----~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~----~~~l~~~D~~~~s~~K~l~gp-~gG~l~~~~~~~~ 273 (356)
|. ..++++|.++|++||+++|+|++|+ |....+.. ..+ ...|++++ +|+++++ +.|+++.++
T Consensus 196 g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~-~~~d~~t~--sK~~~~G~r~G~~~~~~---- 267 (406)
T 4adb_A 196 GGVVPASNAFLQGLRELCNRHNALLIFDEVQT-GVGRTGELYAYMHYG-VTPDLLTT--AKALGGGFPVGALLATE---- 267 (406)
T ss_dssp TTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHT-CCCSEEEE--CGGGGTTSCCEEEEECH----
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhHHHHhcC-CCCCEEEe--chhhcCCCCeEEEEEcH----
Confidence 53 3469999999999999999999996 32111110 001 02688866 7988633 348888877
Q ss_pred hccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 274 INKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 274 ~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++.+.+...... ...+.+.+..+++.++++.+.+
T Consensus 268 ----------~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~ 301 (406)
T 4adb_A 268 ----------ECARVMTVGTHG-TTYGGNPLASAVAGKVLELINT 301 (406)
T ss_dssp ----------HHHHTCCTTSSC-CSSTTCHHHHHHHHHHHHHHSS
T ss_pred ----------HHHhhhccCCcC-CCCCCCHHHHHHHHHHHHHHHh
Confidence 555555433211 2235667777778888887754
No 195
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.72 E-value=1.4e-16 Score=153.40 Aligned_cols=224 Identities=14% Similarity=0.121 Sum_probs=134.7
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------- 130 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------- 130 (356)
.+|.|.+++.+.+.... +.+. .| ..+...++++.+++++|. +++++++||++++..++.++.
T Consensus 82 ~~p~v~~ai~~~~~~~~---~~~~-~~-----~~~~~~~l~~~la~~~g~--~~v~~~~sGseA~~~al~~a~~~~~~~~ 150 (433)
T 1z7d_A 82 CHPNILNAMINQAKNLT---ICSR-AF-----FSVPLGICERYLTNLLGY--DKVLMMNTGAEANETAYKLCRKWGYEVK 150 (433)
T ss_dssp TCHHHHHHHHHHHTTCS---CCCT-TS-----EEHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHhCC---CccC-Cc-----CCHHHHHHHHHHHhhcCC--CeEEEeCCHHHHHHHHHHHHHHHhhhcc
Confidence 68999999999886521 1111 11 123344566888888873 567779999999998887653
Q ss_pred --CCC-CeeeecCCCCCcccCcccccccccccccc-----eeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 018401 131 --KPH-DRIMALDLPHGGHLSHGYQTDTKKISAVS-----IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 202 (356)
Q Consensus 131 --~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~k~v~l~~~n 202 (356)
.+| |+|++.++.|.+................+ ..+..+ +. .|+++|++++...++++|++++.+
T Consensus 151 g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~--~~------~d~~~le~~l~~~~~~~vi~ep~~ 222 (433)
T 1z7d_A 151 KIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKV--PY------DDLEALEEELKDPNVCAFIVEPIQ 222 (433)
T ss_dssp CCCTTCCEEEEETTC--------------------------CEEEE--CT------TCHHHHHHHHTSTTEEEEEECSSB
T ss_pred CCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEe--CC------CCHHHHHHHhCCCCEEEEEEECCC
Confidence 477 99999987765543211110000000000 112222 22 289999999942378888887543
Q ss_pred --CCCcc----cHHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCCcCCCC--CceEEEEecC
Q 018401 203 --YARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKG 270 (356)
Q Consensus 203 --~g~~~----~l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K~l~gp--~gG~l~~~~~ 270 (356)
+|.+. ++++|.++|++||+++|+|++|+ |....+. ...+ -.+|++++| |++++. ++|++++++
T Consensus 223 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~g~~g~~~~~~~~~-~~~di~t~s--K~l~~G~~~~G~v~~~~- 297 (433)
T 1z7d_A 223 GEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYN-VKPDVILLG--KALSGGHYPISAVLAND- 297 (433)
T ss_dssp STTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGT-CCCSEEEEC--GGGGTTSSCCEEEEECH-
T ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCcCCcchhhHhcC-CCCCEEEEC--ccccCCCCCeEEEEECH-
Confidence 67654 79999999999999999999995 4321111 0011 137888655 998754 468888877
Q ss_pred cchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 271 VKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 271 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
++.+.+........+ +.|.+..++..++++.+.++
T Consensus 298 -------------~~~~~l~~~~~~~t~-~~~~~~~aaa~aal~~~~~~ 332 (433)
T 1z7d_A 298 -------------DIMLVIKPGEHGSTY-GGNPLAASICVEALNVLINE 332 (433)
T ss_dssp -------------HHHTTCCTTCCCCTT-TTCHHHHHHHHHHHHHHHHT
T ss_pred -------------HHHhhhccccccccC-CCCHHHHHHHHHHHHHHHhc
Confidence 455444332112222 44567777777889888653
No 196
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.72 E-value=8.1e-17 Score=154.73 Aligned_cols=237 Identities=14% Similarity=0.064 Sum_probs=138.5
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------- 130 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------- 130 (356)
.+|.|++++.+.+... . .+... ....+...+++++++++++.+.+++++++||++++..++++++
T Consensus 46 ~~p~v~~a~~~~~~~~-~-~~~~~------~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g 117 (430)
T 3i4j_A 46 GRAEVGERMAAQAARL-P-FVHGS------QFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERG 117 (430)
T ss_dssp CCHHHHHHHHHHHHHC-C-CCCTT------TCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhc-c-ccccc------ccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcC
Confidence 3899999999988652 1 11111 1123455667799999999888888889999999998888775
Q ss_pred -CCCCeeeecCCCCCcccCcccccccccc-c--c--cce--eeEEEecccCCCCCCCCHHHHHHHhhh---cCCcEEEEc
Q 018401 131 -KPHDRIMALDLPHGGHLSHGYQTDTKKI-S--A--VSI--FFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAG 199 (356)
Q Consensus 131 -~~gd~Vl~~~~~~~~~~~~~~~~~~~~~-~--~--~g~--~~~~v~~~~~~~~~~~d~~~l~~~i~~---~~~k~v~l~ 199 (356)
.++|.|++.++.|.+............. . . ... .+..++.+.....+..|+++|++++++ .++++|+++
T Consensus 118 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~ 197 (430)
T 3i4j_A 118 EPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAE 197 (430)
T ss_dssp CTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEEC
T ss_pred CCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEc
Confidence 4578999988776554321110000000 0 0 000 122222111000022366889888873 356677776
Q ss_pred CCC---CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCC-CCCCccEEEeCCCCcCCCC--CceEEE
Q 018401 200 ASA---YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPS-PFEYADVVTTTTHKSLRGP--RGAMIF 266 (356)
Q Consensus 200 ~~n---~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~-~l~~~D~~~~s~~K~l~gp--~gG~l~ 266 (356)
++| +|...+ +++|.++|++||+++|+|++|+ +|.... ..... + ...|++++| |++++. +-|+++
T Consensus 198 p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~-~~~di~t~s--K~l~~G~~r~G~~~ 274 (430)
T 3i4j_A 198 PVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSG-VTPDIAVLG--KGLAAGYAPLAGLL 274 (430)
T ss_dssp SSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTT-CCCSEEEEC--GGGTTTSSCCEEEE
T ss_pred CcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcC-CCCcEEEEc--ccccCCccccEEEE
Confidence 433 354455 8999999999999999999986 332110 01111 1 126788776 998652 238888
Q ss_pred EecCcchhccCCcchhhhHHHhhcccc---CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 267 FRKGVKEINKQGKEVFYDYEEKINQAV---FPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 267 ~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
.++ ++.+.+.... ......+.+.+..+|..++|+.+.++
T Consensus 275 ~~~--------------~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~ 316 (430)
T 3i4j_A 275 AAP--------------QVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVERE 316 (430)
T ss_dssp ECH--------------HHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred ECH--------------HHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcc
Confidence 877 5555554321 11122345667777778889887653
No 197
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.72 E-value=3.9e-17 Score=158.50 Aligned_cols=187 Identities=13% Similarity=0.143 Sum_probs=121.7
Q ss_pred HHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC----CCCe
Q 018401 60 VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK----PHDR 135 (356)
Q Consensus 60 ~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~----~gd~ 135 (356)
+.|.+++.+.+.... ..|+......+ ++++++++++. +++++++||++++..++.++++ +||+
T Consensus 55 ~~v~~a~~~~~~~~~-------~~y~~~~~~~~----l~~~la~~~~~--~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~ 121 (467)
T 1ax4_A 55 NAMSDHQWAAMITGD-------EAYAGSRNYYD----LKDKAKELFNY--DYIIPAHQGRGAENILFPVLLKYKQKEGKA 121 (467)
T ss_dssp CCEEHHHHHHHHTCC-------CCSSSCHHHHH----HHHHHHHHHCC--CEEEEESSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhhcc-------cccccCccHHH----HHHHHHHHcCC--CcEEEcCCcHHHHHHHHHHHHHhhccCCCc
Confidence 677777776654311 12233334444 45788888886 3667799999999999999888 9998
Q ss_pred ---eeecCCCC-CcccCcccccccccccccceeeEEEeccc--CC-----CCCCCCHHHHHHHhhhc---CCcEEEEc-C
Q 018401 136 ---IMALDLPH-GGHLSHGYQTDTKKISAVSIFFETMPYRL--NE-----STGYIDYDQLEKSATLF---RPKLIVAG-A 200 (356)
Q Consensus 136 ---Vl~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~-----~~~~~d~~~l~~~i~~~---~~k~v~l~-~ 200 (356)
|+++. .| ..+.. .+...|..+..++... +. .++.+|+++|++++++. ++++|+++ +
T Consensus 122 ~~~viv~~-~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~ 192 (467)
T 1ax4_A 122 KNPVFISN-FHFDTTAA--------HVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVT 192 (467)
T ss_dssp SSCEEEES-SCCHHHHH--------HHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESS
T ss_pred cceEEEec-cccchhhH--------HHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEecc
Confidence 88873 33 22111 2233444443332211 11 13468999999999752 58899887 6
Q ss_pred CC-C-CCcc---cHHHHHHHHHHcCCEEEEeccchh-hhc--------ccCCCCCCC-----CCccEEEeCCCCcCCCCC
Q 018401 201 SA-Y-ARLY---DYERIRKVCNKQKAIMLADMAHIS-GLV--------AAGVIPSPF-----EYADVVTTTTHKSLRGPR 261 (356)
Q Consensus 201 ~n-~-g~~~---~l~~I~~la~~~g~~vivD~a~~~-g~~--------~~~~~~~~l-----~~~D~~~~s~~K~l~gp~ 261 (356)
+| + |.+. ++++|+++|++||+++|+|++|.. |.. ..+.....+ ..+|++++|+||+++.|.
T Consensus 193 ~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~ 272 (467)
T 1ax4_A 193 CNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNI 272 (467)
T ss_dssp BTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSS
T ss_pred ccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCc
Confidence 66 6 6543 578999999999999999999876 322 111110000 137899999999886665
Q ss_pred ceEEEEe
Q 018401 262 GAMIFFR 268 (356)
Q Consensus 262 gG~l~~~ 268 (356)
||+++.+
T Consensus 273 Gg~~~~~ 279 (467)
T 1ax4_A 273 GGLVAIR 279 (467)
T ss_dssp CEEEEES
T ss_pred ceEEEeC
Confidence 7888777
No 198
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.71 E-value=8e-17 Score=155.45 Aligned_cols=234 Identities=13% Similarity=0.080 Sum_probs=142.3
Q ss_pred CCeeecCCC--C---CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHH
Q 018401 48 GLELIPSEN--F---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 48 ~i~L~~~~~--~---~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~ 122 (356)
.|++.++.+ + .+|+|++++.+.+.... +.+. .| .. +...++++++++++| .+++++++||++++
T Consensus 78 ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~---~~~~-~~-~~----~~~~~l~~~la~~~g--~~~v~~~~sGseA~ 146 (439)
T 2oat_A 78 YFDFLSSYSAVNQGHCHPKIVNALKSQVDKLT---LTSR-AF-YN----NVLGEYEEYITKLFN--YHKVLPMNTGVEAG 146 (439)
T ss_dssp EEESSGGGGTTTTCBTCHHHHHHHHHHHTTCS---CCCT-TS-EE----SSHHHHHHHHHHHHT--CSEEEEESSHHHHH
T ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHHhcC---cccC-cc-CC----HHHHHHHHHHHHhcC--CCEEEEeCCHHHHH
Confidence 456655433 2 67999999999886521 1111 11 11 223345577888887 45677799999999
Q ss_pred HHHHHhhc---------CCC-CeeeecCCCCCcccCccccccc-----ccccccceeeEEEecccCCCCCCCCHHHHHHH
Q 018401 123 FQVYTALL---------KPH-DRIMALDLPHGGHLSHGYQTDT-----KKISAVSIFFETMPYRLNESTGYIDYDQLEKS 187 (356)
Q Consensus 123 ~~~l~al~---------~~g-d~Vl~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~ 187 (356)
..++.++. .+| |+|++.++.|.+.......... .+..-....+..+ +. .|+++|+++
T Consensus 147 ~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~--~~------~d~~~le~~ 218 (439)
T 2oat_A 147 ETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDII--PY------NDLPALERA 218 (439)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEE--CS------SCHHHHHHH
T ss_pred HHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEe--CC------CCHHHHHHH
Confidence 98888764 467 8999988776544321111000 0000000122223 22 289999999
Q ss_pred hhhcCCcEEEEcCCC--CCCcc----cHHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCCcC
Q 018401 188 ATLFRPKLIVAGASA--YARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSL 257 (356)
Q Consensus 188 i~~~~~k~v~l~~~n--~g~~~----~l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K~l 257 (356)
+.+.++++|++++.+ +|.+. ++++|.++|++||+++|+|++|+ |....+. ...+ -..|++++| |+|
T Consensus 219 l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-g~g~~g~~~~~~~~~-~~~Di~t~s--K~l 294 (439)
T 2oat_A 219 LQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT-GLARTGRWLAVDYEN-VRPDIVLLG--KAL 294 (439)
T ss_dssp TTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGT-CCCSEEEEC--GGG
T ss_pred hCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCccCCcchhHHHhC-CCCcEEEec--ccc
Confidence 953367888887543 67655 79999999999999999999994 4321111 1111 036887554 998
Q ss_pred CCC--CceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 258 RGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 258 ~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+++ ++|++++++ ++.+.+........+ +.+....++..++++.+.++
T Consensus 295 ~~G~~~~G~v~~~~--------------~~~~~l~~~~~~~t~-~~~~~~~aaa~aal~~~~~~ 343 (439)
T 2oat_A 295 SGGLYPVSAVLCDD--------------DIMLTIKPGEHGSTY-GGNPLGCRVAIAALEVLEEE 343 (439)
T ss_dssp GTTSSCCEEEEECH--------------HHHTTSCTTSSCCSS-TTCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCeEEEEECH--------------HHHhccCCCCcccCC-CcCHHHHHHHHHHHHHHhhh
Confidence 764 468998887 454444332112222 34566777777889888654
No 199
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.71 E-value=1.8e-16 Score=152.46 Aligned_cols=234 Identities=12% Similarity=0.055 Sum_probs=143.4
Q ss_pred cCCeeecCC--C---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~--~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..+++.++. + ..+|.|++++.+.+......+++ .+...+++++++++++ ++++++|++||+++
T Consensus 56 ~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-----------~~~~~~l~~~la~~~~-~~~~v~~~~sGsea 123 (434)
T 3l44_A 56 KYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTP-----------TALEVKFAKMLKEAMP-ALDKVRFVNSGTEA 123 (434)
T ss_dssp EEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSC-----------CHHHHHHHHHHHHHCT-TCSEEEEESSHHHH
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCCC-----------CHHHHHHHHHHHHhCC-CCCEEEEeCchHHH
Confidence 456665543 2 24899999999988752211111 1233456688888887 66778889999999
Q ss_pred HHHHHHhhcC--CCCeeeecCCCCCcccCccccccccccc------ccc------eeeEEEecccCCCCCCCCHHHHHHH
Q 018401 122 NFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKIS------AVS------IFFETMPYRLNESTGYIDYDQLEKS 187 (356)
Q Consensus 122 ~~~~l~al~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~------~~g------~~~~~v~~~~~~~~~~~d~~~l~~~ 187 (356)
+..++..+.. ++++|++.++.|.+.............. ..+ ..+..+ +. .|+++|+++
T Consensus 124 ~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~d~~~le~~ 195 (434)
T 3l44_A 124 VMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITV--PF------NNVETLKEA 195 (434)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEE--CT------TCHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEec--Cc------ccHHHHHHH
Confidence 9988887654 7899999887765543211100000000 000 011111 11 189999998
Q ss_pred hhh--cCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCC-C---CCCCCCccEEEeCCCC
Q 018401 188 ATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-I---PSPFEYADVVTTTTHK 255 (356)
Q Consensus 188 i~~--~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~-~---~~~l~~~D~~~~s~~K 255 (356)
+.+ .++++|+++++| +|.+.+ +++|.++|++||+++|+|++|+ |. ..+. . ..+ -..|++++| |
T Consensus 196 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~-g~-~~g~~~~~~~~~-~~~di~t~s--K 270 (434)
T 3l44_A 196 LDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVIT-AF-RFMYGGAQDLLG-VTPDLTALG--K 270 (434)
T ss_dssp HHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TT-TSSSSCHHHHHT-CCCSEEEEE--G
T ss_pred HHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-ce-eccccHHHHHcC-CCCCeeehh--h
Confidence 874 256777777554 566766 9999999999999999999985 22 1110 0 001 026787776 9
Q ss_pred cCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccc--cCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 256 SLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQA--VFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 256 ~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+++++-. |+++.++ ++.+.+... ...+...+.+.+..++..++++.+.++
T Consensus 271 ~~~~G~~iG~~~~~~--------------~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~ 323 (434)
T 3l44_A 271 VIGGGLPIGAYGGKK--------------EIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQE 323 (434)
T ss_dssp GGGTTSSCEEEEECH--------------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTST
T ss_pred hhcCCcCeeeEEEcH--------------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcc
Confidence 8865444 8888776 455544331 111222455677777788889888653
No 200
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.71 E-value=1.6e-16 Score=153.57 Aligned_cols=235 Identities=14% Similarity=0.067 Sum_probs=145.0
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK------ 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~------ 131 (356)
.+|+|++++.+.+.... + . ++.. ...++..++++.++++++.+++++++++||++++..++.++..
T Consensus 67 ~~~~v~~a~~~~~~~~~---~-~-~~~~---~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g 138 (449)
T 3a8u_X 67 TRKEIQEAVAKQLSTLD---Y-S-PGFQ---YGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKG 138 (449)
T ss_dssp SCHHHHHHHHHHTTTCS---C-C-CSSS---CCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhCC---C-c-cccc---cCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence 48999999999886521 1 1 1100 1123445677899999988777888899999999988887653
Q ss_pred --CCCeeeecCCCCCcccCccccccc-----c--cccccceeeEEEecccCC-CC-CCCC--------HHHHHHHhhh--
Q 018401 132 --PHDRIMALDLPHGGHLSHGYQTDT-----K--KISAVSIFFETMPYRLNE-ST-GYID--------YDQLEKSATL-- 190 (356)
Q Consensus 132 --~gd~Vl~~~~~~~~~~~~~~~~~~-----~--~~~~~g~~~~~v~~~~~~-~~-~~~d--------~~~l~~~i~~-- 190 (356)
+||+|++.++.|.+.......... . +....+ +..++++... .. ..+| +++|++++++
T Consensus 139 ~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~ 216 (449)
T 3a8u_X 139 QATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQD--VDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD 216 (449)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCS--EEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCC--CeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC
Confidence 789999988777654321110000 0 000112 3334333210 00 1245 9999999873
Q ss_pred -cCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhccc--CCCCCCCCCccEEEeCCCCcCCC-
Q 018401 191 -FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLRG- 259 (356)
Q Consensus 191 -~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~~~~l~~~D~~~~s~~K~l~g- 259 (356)
.++++|++++.+ +|.+.+ +++|.++|++||+++|+|++|+ +|.... .....+ ...|++++| |+|++
T Consensus 217 ~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~-~~~di~s~s--K~l~~G 293 (449)
T 3a8u_X 217 ASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFG-VTPDLMCIA--KQVTNG 293 (449)
T ss_dssp GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHT-CCCSEEEEC--GGGGTT
T ss_pred CCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcC-CCCCEEEEc--ccccCC
Confidence 256777777543 788778 9999999999999999999994 553211 000011 025888665 99876
Q ss_pred -CCceEEEEecCcchhccCCcchhhhHHHhhcccc--------CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 260 -PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--------FPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 260 -p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
.+.|++++++ ++.+.+.... ......+.+.+..+++.++++.+.++
T Consensus 294 ~~~~G~~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~ 348 (449)
T 3a8u_X 294 AIPMGAVIAST--------------EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKE 348 (449)
T ss_dssp SSCCEEEEEEH--------------HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEECH--------------HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhc
Confidence 3457788877 4444443210 11112345667788888899888654
No 201
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.71 E-value=2e-16 Score=151.47 Aligned_cols=244 Identities=13% Similarity=-0.022 Sum_probs=146.0
Q ss_pred CCeeecCC-----CCCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHc-CCCCCccccCCCchHH
Q 018401 48 GLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF-RLDPEKWGGSLSGSPS 121 (356)
Q Consensus 48 ~i~L~~~~-----~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~-g~~~~~v~v~~sgs~a 121 (356)
.+++..+. .+.+|.|++++.+.+.... ..... |...... .++++.+++++ |..++++++++||+++
T Consensus 43 ~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~---~~~~~-~~~~~~~----~~l~~~la~~~~~~~~~~v~~~~g~~~a 114 (426)
T 1sff_A 43 YLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS---HTCFQ-VLAYEPY----LELCEIMNQKVPGDFAKKTLLVTTGSEA 114 (426)
T ss_dssp EEESSHHHHTCTTCBTCHHHHHHHHHHTTTCS---CCCTT-TEECHHH----HHHHHHHHHHSSCSSCEEEEEESSHHHH
T ss_pred EEEcccChhhcccCCCCHHHHHHHHHHHHhCC---Ccccc-ccCCHHH----HHHHHHHHHhCCcccccEEEEeCchHHH
Confidence 45664433 2368999999999886521 11111 1222223 35668888888 4233677779999999
Q ss_pred HHHHHH---hhcCCCCeeeecCCCCCcccCcccccc------cccccccceeeEEEecccCC--CCCCCCHHHHHHHhhh
Q 018401 122 NFQVYT---ALLKPHDRIMALDLPHGGHLSHGYQTD------TKKISAVSIFFETMPYRLNE--STGYIDYDQLEKSATL 190 (356)
Q Consensus 122 ~~~~l~---al~~~gd~Vl~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~v~~~~~~--~~~~~d~~~l~~~i~~ 190 (356)
+..++. ++.++| +|++.++.|.+......... +.........+..++++.+. .++.+|+++|++++++
T Consensus 115 ~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~ 193 (426)
T 1sff_A 115 VENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKN 193 (426)
T ss_dssp HHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHh
Confidence 998877 667777 88888877655432111000 00000000013345433210 1234689999998873
Q ss_pred ----cCCcEEEEc--CCCCCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccC----CCCCCCCCccEEEeCCCCc
Q 018401 191 ----FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSPFEYADVVTTTTHKS 256 (356)
Q Consensus 191 ----~~~k~v~l~--~~n~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~----~~~~~l~~~D~~~~s~~K~ 256 (356)
.++++|+++ ++|+|...+ +++|.++|++||+++|+|++|+ |....+ +...+ ..+|++++ +|+
T Consensus 194 ~~~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~-~~~di~s~--sK~ 269 (426)
T 1sff_A 194 DAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-GAGRTGTLFAMEQMG-VAPDLTTF--AKS 269 (426)
T ss_dssp TCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTT-SCCSEEEE--CGG
T ss_pred ccCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcccchhhhhhcC-CCCCEEEE--ccc
Confidence 367888886 456886666 9999999999999999999997 432211 11111 13687755 498
Q ss_pred CCC-CCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 257 LRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 257 l~g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+++ .+-|++++++ ++.+.+...... ...+.+.+..+++.++|+.+.++
T Consensus 270 ~~~GlriG~~~~~~--------------~~~~~l~~~~~~-~~~~~~~~~~~a~~aal~~~~~~ 318 (426)
T 1sff_A 270 IAGGFPLAGVTGRA--------------EVMDAVAPGGLG-GTYAGNPIACVAALEVLKVFEQE 318 (426)
T ss_dssp GGTSSCCEEEEEEH--------------HHHTTSCTTSBC-CSSSSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCCceEEEEEcH--------------HHHhhhccCCcC-cCCCCCHHHHHHHHHHHHHHHhc
Confidence 864 1129999887 444444321111 12345677788888899888653
No 202
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.71 E-value=3.7e-17 Score=161.62 Aligned_cols=203 Identities=12% Similarity=0.101 Sum_probs=140.1
Q ss_pred CCeeecCCC-CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHH-cC-C--C-CCccccCCCchHH
Q 018401 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA-FR-L--D-PEKWGGSLSGSPS 121 (356)
Q Consensus 48 ~i~L~~~~~-~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~-~g-~--~-~~~v~v~~sgs~a 121 (356)
.++|..+.. ..++++++++.+.+... .| +.+..+..++++++++++++. .+ . . ++++++|+|++++
T Consensus 105 ~i~l~~g~~~~~~~~~v~a~~~~~~~~---~y-----~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~a 176 (533)
T 3f6t_A 105 AVNYCHTELGLNRDKVVAEWVNGAVAN---NY-----PVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAA 176 (533)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHTC---SC-----CSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHH
T ss_pred heeccCCCCCcCCcHHHHHHHHHHHhC---CC-----CCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHH
Confidence 456654443 24677777777666531 22 222344577888888888776 33 3 2 3577779999999
Q ss_pred HHHHHHh-----hcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccC-CCCCCCCHHHHHHHhhhcCCcE
Q 018401 122 NFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN-ESTGYIDYDQLEKSATLFRPKL 195 (356)
Q Consensus 122 ~~~~l~a-----l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~d~~~l~~~i~~~~~k~ 195 (356)
+..++.+ ++++||+|+++.++|.++.. .+...|..++.++++.+ .+++.+|+++|++++.+ ++++
T Consensus 177 l~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~-~~k~ 247 (533)
T 3f6t_A 177 IVYAFHSLAENHLLKKGDKIAINEPIFTPYLR--------IPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP-SIKA 247 (533)
T ss_dssp HHHHHHHHHHTTSSCTTCEEEEESSCCHHHHT--------SGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT-TEEE
T ss_pred HHHHHHHhhhhhccCCcCEEEEcCCCcHHHHH--------HHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC-CCeE
Confidence 9988887 78999999999987766543 44456766766755431 14468899999999986 8999
Q ss_pred EEEc-CCC-CCCcccHH---HHHHHHH-HcCCEEEEeccchhhhcccCCCC-CC-CCCccEEEeCCCCcCCCCCc---eE
Q 018401 196 IVAG-ASA-YARLYDYE---RIRKVCN-KQKAIMLADMAHISGLVAAGVIP-SP-FEYADVVTTTTHKSLRGPRG---AM 264 (356)
Q Consensus 196 v~l~-~~n-~g~~~~l~---~I~~la~-~~g~~vivD~a~~~g~~~~~~~~-~~-l~~~D~~~~s~~K~l~gp~g---G~ 264 (356)
|+++ ++| +|.+.+.+ +|+++|+ +||+++|+|++|+.. .. +... .. ..+.++++.|++|.++ ++| |+
T Consensus 248 v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~-~~-~~~~~~~~~~~~~i~~~S~SK~~g-~~G~RiG~ 324 (533)
T 3f6t_A 248 LIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAF-VP-NFKSIYSVVPYNTMLVYSYSKLFG-CTGWRLGV 324 (533)
T ss_dssp EEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGG-ST-TCCCHHHHSGGGEEEEEESHHHHT-CGGGCEEE
T ss_pred EEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCcccc-cc-CccCHhhcCCCCEEEEecCcccCC-CcccceEE
Confidence 9886 878 89777655 7788888 689999999998632 21 1110 00 0135699999999764 334 99
Q ss_pred EEEecC
Q 018401 265 IFFRKG 270 (356)
Q Consensus 265 l~~~~~ 270 (356)
++.+++
T Consensus 325 l~~~~~ 330 (533)
T 3f6t_A 325 IALNEK 330 (533)
T ss_dssp EEEESS
T ss_pred EEECcH
Confidence 998875
No 203
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.70 E-value=3.7e-16 Score=151.13 Aligned_cols=215 Identities=15% Similarity=0.126 Sum_probs=134.0
Q ss_pred hHHHHHHHHHHHHHH-cCCeeecCCC-------CCcHHHHHHHHhhhh--ccCCCCCCCCccCCCchhHHHHHHHHHHHH
Q 018401 32 PEIADIIEHEKARQW-KGLELIPSEN-------FTSVSVMQAVGSVMT--NKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (356)
Q Consensus 32 ~~~~~~~~~~~~~~~-~~i~L~~~~~-------~~~~~V~~a~~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 101 (356)
..++.......+... ..|+|..+.. ++.+.+.+++.+... .....+| ....+..++++++.+++
T Consensus 34 ~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y------~~~~G~~~lr~~ia~~l 107 (448)
T 3meb_A 34 DAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEY------PPVAGFPLFLEAAQFLM 107 (448)
T ss_dssp CTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSC------CCTTCCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCC------CCCcchHHHHHHHHHHh
Confidence 346666665433333 3588865443 245667777555441 1111122 23344556664444443
Q ss_pred HHHcCCC-----CCcccc--CCCchHHHHH--HHHhhcCCCCeeeecCCCCCcccCccccccccccc----ccceeeEEE
Q 018401 102 LEAFRLD-----PEKWGG--SLSGSPSNFQ--VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS----AVSIFFETM 168 (356)
Q Consensus 102 a~~~g~~-----~~~v~v--~~sgs~a~~~--~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~v 168 (356)
+|.+ ++++++ |+||++++.. .+.+++.+||+|++++++|.++.. .+. ..|.+++.+
T Consensus 108 ---~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~~~~~G~~v~~~ 176 (448)
T 3meb_A 108 ---FGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYG--------IYDKVFNKLKVPYKEY 176 (448)
T ss_dssp ---HCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHH--------HHHHHHCTTTSCCEEE
T ss_pred ---cCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHH--------HHHhhHHhCCCeEEEE
Confidence 3776 678888 9999998875 456778999999999977765533 334 557666556
Q ss_pred ecccCCC-CCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcc-cCCC
Q 018401 169 PYRLNES-TGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA-AGVI 239 (356)
Q Consensus 169 ~~~~~~~-~~~~d~~~l~~~i~~--~~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~-~~~~ 239 (356)
++. +.+ ++.+|++++++++++ .++++++++ ++| ||...+ +++|+++|+++|+++|+|+++...... .+..
T Consensus 177 ~~~-~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~ 255 (448)
T 3meb_A 177 TYL-RKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEAD 255 (448)
T ss_dssp CCB-CTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHH
T ss_pred ecc-ccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccC
Confidence 431 323 478999999999975 246677776 777 887666 556999999999999999997532111 0000
Q ss_pred CCC------CCCccEEEeCCCCcCCCCCc---eEE
Q 018401 240 PSP------FEYADVVTTTTHKSLRGPRG---AMI 265 (356)
Q Consensus 240 ~~~------l~~~D~~~~s~~K~l~gp~g---G~l 265 (356)
..+ ...-.+++.|+||.++ +.| |++
T Consensus 256 ~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~RiG~l 289 (448)
T 3meb_A 256 AFAVRMFVDAGVEVLVAQSFSKNFG-LYGERIGCL 289 (448)
T ss_dssp THHHHHHHHTTCCEEEEEECTTTSC-CGGGCCEEE
T ss_pred chhHHHHhhcCCcEEEEecccccCC-Cccccceee
Confidence 000 0113477999999764 334 776
No 204
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.70 E-value=8e-17 Score=153.68 Aligned_cols=230 Identities=13% Similarity=0.059 Sum_probs=133.6
Q ss_pred hhhcccccccChH-HHHHHHHHHHHH-HcCCeeecCCC---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHH
Q 018401 21 KQLNAPLEVVDPE-IADIIEHEKARQ-WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAES 95 (356)
Q Consensus 21 ~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~i~L~~~~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 95 (356)
..|.+++..++++ ++..+....+.. .+.|+|..+.. +.++.+.+++.++... ...+| ....+..++++
T Consensus 14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~-~~~~y------~~~~g~~~lr~ 86 (409)
T 4eu1_A 14 AQTQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQATLG-TNMDY------APVTGIASFVE 86 (409)
T ss_dssp -------------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCCCC-SCCCC------CCTTCCHHHHH
T ss_pred hhHhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcCcc-ccccC------CCCCCcHHHHH
Confidence 3344666777776 666666543322 35688886663 3467788888776322 11122 33344566665
Q ss_pred HHHHHHHHHcCCC-----CCcccc--CCCchHHHHHH---HHhhcCCCCeeeecCCCCCcccCcccccccccccccceee
Q 018401 96 LCQKRALEAFRLD-----PEKWGG--SLSGSPSNFQV---YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 165 (356)
Q Consensus 96 ~~~~~la~~~g~~-----~~~v~v--~~sgs~a~~~~---l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 165 (356)
++.+++ +|.. ++++.+ +.+|++++..+ +.+++++||+|+++.+.|.++.. .+...|.++
T Consensus 87 ~ia~~~---~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~ 155 (409)
T 4eu1_A 87 EAQKLC---FGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHES--------IFAKAGMEL 155 (409)
T ss_dssp HHHHHH---HCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHH--------HHHHTTCEE
T ss_pred HHHHHH---cCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCCeE
Confidence 555544 3554 566643 77778777643 44567899999999977655532 455667767
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhccc--
Q 018401 166 ETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA-- 236 (356)
Q Consensus 166 ~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k~v~l~-~~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~-- 236 (356)
+.+++..+ +++.+|+++|++++++. ++++++++ ++| +|.+.+ +++|+++|++||+++|+|++|+......
T Consensus 156 ~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~ 234 (409)
T 4eu1_A 156 TPYSYYDP-ATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLD 234 (409)
T ss_dssp EEECCEET-TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHH
T ss_pred EEEEeecC-cCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcc
Confidence 66643222 45689999999999741 45566666 777 887776 5558999999999999999976332110
Q ss_pred ----CCCCC-CCCCccEEEeCCCCcCCCC--CceEE--EEec
Q 018401 237 ----GVIPS-PFEYADVVTTTTHKSLRGP--RGAMI--FFRK 269 (356)
Q Consensus 237 ----~~~~~-~l~~~D~~~~s~~K~l~gp--~gG~l--~~~~ 269 (356)
.+... ....-.+++.|.+|+++.| +-|++ ++.+
T Consensus 235 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~ 276 (409)
T 4eu1_A 235 YDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTAS 276 (409)
T ss_dssp HHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSS
T ss_pred cchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCC
Confidence 00000 0011347888999987433 22876 4444
No 205
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.70 E-value=1.5e-16 Score=154.28 Aligned_cols=247 Identities=13% Similarity=0.012 Sum_probs=148.1
Q ss_pred cCCeeecC--CCC---CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPS--ENF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~--~~~---~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
+.|++.++ .++ .+|.|.+++.+.+.... .+.... ...+...+++++++++++...++++|++||+++
T Consensus 76 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~--~~~~~~------~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA 147 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGHGHPALDQALTTQLRVMN--HVMFGG------LTHEPAARLAKLLVDITPAGLDTVFFSDSGSVS 147 (457)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCS--CCCSSS------EECHHHHHHHHHHHHHSSTTEEEEEEESSHHHH
T ss_pred EEEECCCcHhhhccCCCCHHHHHHHHHHHHhcc--Cccccc------cCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHH
Confidence 45666543 222 48999999999887521 111011 112344567799999998877778889999999
Q ss_pred HHHHHHhhcC-------CC-CeeeecCCCCCcccCcccc------cccccccccceeeEEEecccCCCCCCCCHHHHHHH
Q 018401 122 NFQVYTALLK-------PH-DRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKS 187 (356)
Q Consensus 122 ~~~~l~al~~-------~g-d~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~ 187 (356)
+..++..+.. +| +.|++.+..|.+....... .++............++++.. .....|+++|+++
T Consensus 148 ~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~d~~~le~~ 226 (457)
T 3tfu_A 148 VEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPR-DYDPAYSAAFEAQ 226 (457)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCS-SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCc-ccCHHHHHHHHHH
Confidence 9988887754 55 4788877666543211000 000000000111333433322 1123588999999
Q ss_pred hhh--cCCcEEEEcC-CC--CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccCC--CCCCCCCccEEEeCCCC
Q 018401 188 ATL--FRPKLIVAGA-SA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHK 255 (356)
Q Consensus 188 i~~--~~~k~v~l~~-~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~~--~~~~l~~~D~~~~s~~K 255 (356)
+++ .++++|++.+ .+ +|...+ +++|.++|++||+++|+|++|+ +|...... ...+ ...|++++| |
T Consensus 227 l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~-~~pdiit~s--K 303 (457)
T 3tfu_A 227 LAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAG-VSPDIMCVG--K 303 (457)
T ss_dssp HHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHT-CCCSEEEEC--G
T ss_pred HHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcC-CCceEEEEC--h
Confidence 873 2677888876 33 576654 9999999999999999999985 32211100 0001 026888766 9
Q ss_pred cCCCC--CceEEEEecCcchhccCCcchhhhHHHhhcc---cc-CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 256 SLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQ---AV-FPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 256 ~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~---~~-~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+|+|+ +.|+++.++ ++.+.+.. .. ..+...+.|.+..++..++|+.+.++
T Consensus 304 ~l~gG~~~lG~v~~~~--------------~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~ 359 (457)
T 3tfu_A 304 ALTGGYLSLAATLCTA--------------DVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQ 359 (457)
T ss_dssp GGGTTSSCCEEEEEEH--------------HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTS
T ss_pred hhhCCCcceEEEEEcH--------------HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhh
Confidence 99773 558888887 55555531 11 11122345667777777889988654
No 206
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.70 E-value=4.9e-16 Score=148.28 Aligned_cols=225 Identities=13% Similarity=0.115 Sum_probs=145.9
Q ss_pred ccccccChH-HHHHHHHHHHHH-HcCCeeecCC-------CCCcHHHHHHHHhhh-hccCCCCCCCCccCCCchhHHHHH
Q 018401 25 APLEVVDPE-IADIIEHEKARQ-WKGLELIPSE-------NFTSVSVMQAVGSVM-TNKYSEGYPGARYYGGNEYIDMAE 94 (356)
Q Consensus 25 ~~~~~~~~~-~~~~~~~~~~~~-~~~i~L~~~~-------~~~~~~V~~a~~~~l-~~~~~~~~~~~~~~~~~~~~~~l~ 94 (356)
..+..++++ ++.......+.. .+.|+|..++ .++++.|.+++. .+ ..... ..|+...+..+++
T Consensus 6 ~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~------~~Y~~~~G~~~lr 78 (405)
T 3k7y_A 6 SSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKE------KPYLLGNGTEDFS 78 (405)
T ss_dssp GGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCC------CCCCTTSSCHHHH
T ss_pred hcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCC------CCCCCCCCcHHHH
Confidence 344555555 555555432222 3678998764 135788888876 43 22111 2234446678899
Q ss_pred HHHHHHHHHHcCC--CCCc--cccCCCchHHHHHHHHhhcC--CCCeeeecCCCCCcccCcccccccccccccceeeEEE
Q 018401 95 SLCQKRALEAFRL--DPEK--WGGSLSGSPSNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 168 (356)
Q Consensus 95 ~~~~~~la~~~g~--~~~~--v~v~~sgs~a~~~~l~al~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 168 (356)
+++.+++.+..+. ++++ +++|.|+++++..++.+++. | |+|++++|.| ..+...+...|++++.+
T Consensus 79 ~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y--------~~~~~~~~~~g~~~~~v 149 (405)
T 3k7y_A 79 TLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPY--------INHVNMIESRGFNLKYI 149 (405)
T ss_dssp HHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCC--------HHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCC--------HhHHHHHHHcCCeEEEE
Confidence 8888888665553 3444 35588889999988888877 8 9999999544 44444566778777666
Q ss_pred ecccCCCCCCCCHHHHHHHhhhc-CCcEEEEc-C-CC-CCCccc---HHHHHHHHHHcCCEEEEeccchhhhcccCCC--
Q 018401 169 PYRLNESTGYIDYDQLEKSATLF-RPKLIVAG-A-SA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVI-- 239 (356)
Q Consensus 169 ~~~~~~~~~~~d~~~l~~~i~~~-~~k~v~l~-~-~n-~g~~~~---l~~I~~la~~~g~~vivD~a~~~g~~~~~~~-- 239 (356)
++. +.+++.+|+++|++++.+. ++++++++ + +| ||...+ +++|+++|++|++++|+|+++.- ....+..
T Consensus 150 ~~~-~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~-l~~~~~~~~ 227 (405)
T 3k7y_A 150 NFF-DYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQG-FGHTNLEED 227 (405)
T ss_dssp CCE-ETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTT-TSSSSTTGG
T ss_pred ecc-ccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCccc-ccCCCcccc
Confidence 542 3245789999999999752 46788886 4 57 886665 66788889999999999999742 1111100
Q ss_pred -----C-CCCCCccEEEeCCCCcCC--CCCceEEEE
Q 018401 240 -----P-SPFEYADVVTTTTHKSLR--GPRGAMIFF 267 (356)
Q Consensus 240 -----~-~~l~~~D~~~~s~~K~l~--gp~gG~l~~ 267 (356)
. .....--+++.|++|+++ |-+-|++++
T Consensus 228 ~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~ 263 (405)
T 3k7y_A 228 VLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHI 263 (405)
T ss_dssp GHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEE
T ss_pred hHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEE
Confidence 0 000012378899999874 455598864
No 207
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.70 E-value=5.5e-16 Score=148.88 Aligned_cols=234 Identities=12% Similarity=0.084 Sum_probs=140.4
Q ss_pred cCCeeecCCC-----CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~~-----~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..+++.++.. ..+|+|++++.+.+......++ . .+...+++++++++++ .+++++|++||+++
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-------~----~~~~~~la~~l~~~~~-~~~~v~~~~sGsea 121 (429)
T 4e77_A 54 AYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGA-------P----TEMEVKMAQLVTDLVP-TMDMVRMVNSGTEA 121 (429)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSS-------C----CHHHHHHHHHHHHHST-TCSEEEEESSHHHH
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCC-------C----CHHHHHHHHHHHhhCC-CCCEEEEeCcHHHH
Confidence 4566665542 2489999999998876321111 1 1344456688999987 56777889999999
Q ss_pred HHHHHHhhc--CCCCeeeecCCCCCcccCccccc-----------ccccc-cccceeeEEEecccCCCCCCCCHHHHHHH
Q 018401 122 NFQVYTALL--KPHDRIMALDLPHGGHLSHGYQT-----------DTKKI-SAVSIFFETMPYRLNESTGYIDYDQLEKS 187 (356)
Q Consensus 122 ~~~~l~al~--~~gd~Vl~~~~~~~~~~~~~~~~-----------~~~~~-~~~g~~~~~v~~~~~~~~~~~d~~~l~~~ 187 (356)
+..++.... .+++.|++.+..|.+........ ...++ .........+ +. .|+++|+++
T Consensus 122 ~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~d~~~le~~ 193 (429)
T 4e77_A 122 TMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTC--TY------NDLASVRQA 193 (429)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEE--CT------TCHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeec--CC------CCHHHHHHH
Confidence 998887542 45678888776654443200000 00000 0000011111 11 289999999
Q ss_pred hhhc--CCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCC
Q 018401 188 ATLF--RPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHK 255 (356)
Q Consensus 188 i~~~--~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K 255 (356)
+++. ++++|++.|.| .|.+.+ +++|.++|++||+++|+|++|+ |. ..+. ...+. ..|++++| |
T Consensus 194 l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~-r~g~~~~~~~~~~-~pdi~t~s--K 268 (429)
T 4e77_A 194 FEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMT-GF-RVALAGAQDYYHV-IPDLTCLG--K 268 (429)
T ss_dssp HHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTT-BT-TTBTTCHHHHTTC-CCSEEEEE--G
T ss_pred HHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Cc-ccCcchHHHhcCC-CCCeeeec--c
Confidence 8742 45677776554 466666 9999999999999999999997 22 1110 00110 25887666 9
Q ss_pred cCCCC-CceEEEEecCcchhccCCcchhhhHHHhhcccc--CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 256 SLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 256 ~l~gp-~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+++++ +.|+++.++ ++.+.+.... ......+.+.+..++..++|+.+.++
T Consensus 269 ~~~~G~~~G~~~~~~--------------~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~ 321 (429)
T 4e77_A 269 IIGGGMPVGAFGGRR--------------EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQV 321 (429)
T ss_dssp GGGTTSCCEEEEECH--------------HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTST
T ss_pred cccCCCCeEEEEECH--------------HHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 88643 448888876 4544443211 11112356778888888999988653
No 208
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.69 E-value=1.5e-16 Score=152.83 Aligned_cols=234 Identities=12% Similarity=-0.016 Sum_probs=142.9
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc--CCCCe
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL--KPHDR 135 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~--~~gd~ 135 (356)
.+|+|++++.+.+.... +... .|. .+...++++.++++++++++++++++||++++..+++.+. ..+|+
T Consensus 60 ~~p~v~~a~~~~~~~~~---~~~~-~~~-----~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~ 130 (433)
T 1zod_A 60 CHPEIVSVIGEYAGKLD---HLFS-EML-----SRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYE 130 (433)
T ss_dssp TCHHHHHHHHHHHHHCC---CCCT-TCC-----CHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHHTCCE
T ss_pred CCHHHHHHHHHHHHhCc---cccc-ccC-----CHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCe
Confidence 48999999999886521 1111 111 1344556688999999888888889999999998887653 34688
Q ss_pred eeecCCCCCcccCcccc----cccc--cccccceeeEEEecccCCC-C--------CCCCHHHHHHHhhh---cCCcEEE
Q 018401 136 IMALDLPHGGHLSHGYQ----TDTK--KISAVSIFFETMPYRLNES-T--------GYIDYDQLEKSATL---FRPKLIV 197 (356)
Q Consensus 136 Vl~~~~~~~~~~~~~~~----~~~~--~~~~~g~~~~~v~~~~~~~-~--------~~~d~~~l~~~i~~---~~~k~v~ 197 (356)
|++.++.|.+....... .++. .....| +..++++.... . +.+|+++|++++++ .++++|+
T Consensus 131 vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi 208 (433)
T 1zod_A 131 IVGFAQSWHGMTGAAASATYSAGRKGVGPAAVG--SFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFI 208 (433)
T ss_dssp EEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTT--EEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred EEEECCCcCCCChhHHhhcCCccccccCCCCCC--ceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 99988776543211000 0000 111223 33343322100 0 12469999999874 3667777
Q ss_pred EcCC-C-CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccCC--CCCCCCCccEEEeCCCCcCCCCCc-eEEEE
Q 018401 198 AGAS-A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLRGPRG-AMIFF 267 (356)
Q Consensus 198 l~~~-n-~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~~--~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~ 267 (356)
++|+ | +|...+ +++|.++|++||+++|+|++|+ +|...... ...+ ...|++++| |+|+++-. |++++
T Consensus 209 ~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~-~~~di~s~s--K~~~~G~~ig~~~~ 285 (433)
T 1zod_A 209 AEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDG-VTPDILTLS--KTLGAGLPLAAIVT 285 (433)
T ss_dssp ECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHT-CCCSEEEEC--HHHHTTSSCEEEEE
T ss_pred EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcC-CCCCEEEec--ccccCCCCeeEEEE
Confidence 7754 3 686665 9999999999999999999997 44221100 0001 126777665 98865333 89988
Q ss_pred ecCcchhccCCcchhhhHHHhhccccCC-CCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 268 RKGVKEINKQGKEVFYDYEEKINQAVFP-GLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 268 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
++ ++.+.+...... ....+.+.+..++..++++.+.++
T Consensus 286 ~~--------------~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~ 324 (433)
T 1zod_A 286 SA--------------AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRD 324 (433)
T ss_dssp CH--------------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred hH--------------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 87 455554432111 112234667777778899887654
No 209
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.69 E-value=6.8e-17 Score=156.76 Aligned_cols=242 Identities=12% Similarity=0.000 Sum_probs=145.4
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK------ 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~------ 131 (356)
.+|.|++++.+.+.... ..++.. ....+...+++++++++++.+.++++|++||++++..+++.+..
T Consensus 67 ~~p~v~~A~~~~~~~~~-~~~~~~------~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g 139 (459)
T 4a6r_A 67 GRKDFAEAARRQMEELP-FYNTFF------KTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQG 139 (459)
T ss_dssp CCHHHHHHHHHHHHHCS-CCCTTS------SSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcc-cccccc------ccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcC
Confidence 47999999999887521 112211 11234556677999999988888888899999999988888764
Q ss_pred --CCCeeeecCCCCCcccCcc-----cccccc--cccccceeeEEEeccc--CCCCCCCC--------HHHHHHHhhh--
Q 018401 132 --PHDRIMALDLPHGGHLSHG-----YQTDTK--KISAVSIFFETMPYRL--NESTGYID--------YDQLEKSATL-- 190 (356)
Q Consensus 132 --~gd~Vl~~~~~~~~~~~~~-----~~~~~~--~~~~~g~~~~~v~~~~--~~~~~~~d--------~~~l~~~i~~-- 190 (356)
+++.|++.++.|.+..... ...++. .....+ +..++++. ...++ .| +++|++++.+
T Consensus 140 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~ 216 (459)
T 4a6r_A 140 KPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPG--MAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIG 216 (459)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSS--EEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCC--CEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcC
Confidence 5789999887776543100 000000 011112 23343222 10111 34 7888888863
Q ss_pred -cCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCCCCcCCCC
Q 018401 191 -FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGP 260 (356)
Q Consensus 191 -~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~~K~l~gp 260 (356)
.++++|++.+.+ .|...+ +++|.++|++||+++|+|++|+ +|..... ....+ -..|++++| |+++|+
T Consensus 217 ~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~-~~pdi~t~s--K~l~gg 293 (459)
T 4a6r_A 217 ADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFG-FQPDLFTAA--KGLSSG 293 (459)
T ss_dssp GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHT-CCCSEEEEC--GGGGTT
T ss_pred CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcC-CCCCeeehh--hhhcCC
Confidence 256777777544 456565 9999999999999999999986 3221100 00001 026888876 998663
Q ss_pred --CceEEEEecCcchhccCCcchhhhHHHhhccc--cCCCCCCCCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 261 --RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA--VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 261 --~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
+-|+++.++ ++.+.+... ...+...+.+....++..++|+.+.++.-.++.+
T Consensus 294 ~~~lg~v~~~~--------------~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 349 (459)
T 4a6r_A 294 YLPIGAVFVGK--------------RVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVK 349 (459)
T ss_dssp SSCCEEEEECH--------------HHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCCccceeeCH--------------HHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHH
Confidence 338888877 455544311 0000112445667777778898876543334444
No 210
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.69 E-value=1.6e-15 Score=147.90 Aligned_cols=235 Identities=9% Similarity=-0.002 Sum_probs=143.7
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------- 130 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------- 130 (356)
.+|.|++++.+.+.. ...++... ...+...+++++++++++.+.++++|++||++++..++..+.
T Consensus 71 ~~p~v~~A~~~~l~~-~~~~~~~~-------~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g 142 (476)
T 3i5t_A 71 GRREIVDAMAHQAMV-LPYASPWY-------MATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLG 142 (476)
T ss_dssp CCHHHHHHHHHHHHH-CCCCCTTT-------CBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHh-ccCcccCc-------cCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcC
Confidence 489999999998875 21122111 122455567799999998777777889999999998888775
Q ss_pred -CCCCeeeecCCCCCcccCcc-----cccccc--cccccceeeEEEecccCCCCCCCC--------HHHHHHHhhh---c
Q 018401 131 -KPHDRIMALDLPHGGHLSHG-----YQTDTK--KISAVSIFFETMPYRLNESTGYID--------YDQLEKSATL---F 191 (356)
Q Consensus 131 -~~gd~Vl~~~~~~~~~~~~~-----~~~~~~--~~~~~g~~~~~v~~~~~~~~~~~d--------~~~l~~~i~~---~ 191 (356)
..++.|++.++.|.+..... ...++. .....+ +..++++........| +++|++++.+ .
T Consensus 143 ~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~ 220 (476)
T 3i5t_A 143 RPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDR--ISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPD 220 (476)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTT--EEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGG
T ss_pred CCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCC--cEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCC
Confidence 34678998887765443110 001110 011122 2223322210111112 7889888863 2
Q ss_pred CCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhccc--CCC-CCCCCCccEEEeCCCCcCCCC-
Q 018401 192 RPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVI-PSPFEYADVVTTTTHKSLRGP- 260 (356)
Q Consensus 192 ~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~-~~~l~~~D~~~~s~~K~l~gp- 260 (356)
++++|++.+.+ .|...+ +++|.++|++||+++|+|++|+ +|.... ... ..+. ..|++++| |+++|+
T Consensus 221 ~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~pdi~t~s--K~l~~G~ 297 (476)
T 3i5t_A 221 TIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-VPDIITFA--KGVTSGY 297 (476)
T ss_dssp GEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-CCSEEEEC--GGGGTTS
T ss_pred CEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-Ccchhhhh--hhhcCCC
Confidence 56788887443 465444 9999999999999999999996 332210 001 1111 26888877 998763
Q ss_pred -CceEEEEecCcchhccCCcchhhhHHHhhcccc------CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 261 -RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV------FPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 261 -~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+-|+++.++ ++.+.+.... ..+...+.|..+.+|..++|+.+.++
T Consensus 298 ~plg~v~~~~--------------~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~ 349 (476)
T 3i5t_A 298 VPLGGLAISE--------------AVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMERE 349 (476)
T ss_dssp SCCEEEEECH--------------HHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred cCeEEEEECH--------------HHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhH
Confidence 338888877 5666554321 11222344667777788899988654
No 211
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.69 E-value=8.8e-17 Score=153.28 Aligned_cols=156 Identities=16% Similarity=0.151 Sum_probs=115.2
Q ss_pred HHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCC
Q 018401 95 SLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 174 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 174 (356)
+++++.+++++|.+ ..++++||++++.+ +.+++++||+|+++.+.|++........ +....|..+..+ +.+
T Consensus 70 ~~l~~~la~l~g~~--~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~---~~~~~g~~~~~v--~~~- 140 (400)
T 3nmy_A 70 FAYERCVAALEGGT--RAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERV---RRRTAGLDFSFV--DLT- 140 (400)
T ss_dssp HHHHHHHHHHHTCS--EEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHT---HHHHHCCEEEEE--CTT-
T ss_pred HHHHHHHHHHhCCC--CEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHh---hHhhcCeEEEEE--CCC-
Confidence 44558889999876 34557788999885 6778999999999998887554322110 012235555444 332
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 175 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 175 ~~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
|++++++++++ ++++|+++ ++| +|.+.|+++|+++|++||+++|+|++|+.+.....+ .. ++|+++.|
T Consensus 141 -----d~~~l~~~i~~-~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~~---g~div~~S 210 (400)
T 3nmy_A 141 -----DPAAFKAAIRA-DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPL-SL---GADLVVHS 210 (400)
T ss_dssp -----SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGG-GG---TCSEEEEE
T ss_pred -----CHHHHHHHhcc-CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh-hc---CCcEEEec
Confidence 89999999987 89999987 777 899999999999999999999999999866542111 12 38999999
Q ss_pred CCCcCCCC---Cce-EEEEec
Q 018401 253 THKSLRGP---RGA-MIFFRK 269 (356)
Q Consensus 253 ~~K~l~gp---~gG-~l~~~~ 269 (356)
++|+|+|| .|| ++++++
T Consensus 211 ~sK~l~g~g~~~gG~~vv~~~ 231 (400)
T 3nmy_A 211 ATKYLNGHSDMVGGIAVVGDN 231 (400)
T ss_dssp TTTTTTCSSSCCCEEEEECSC
T ss_pred CccccCCCCCcceeEEEEeCC
Confidence 99999877 357 555544
No 212
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.69 E-value=6e-16 Score=148.51 Aligned_cols=234 Identities=12% Similarity=0.054 Sum_probs=144.0
Q ss_pred cCCeeecCC--CC---CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSE--NF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~--~~---~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++.++. ++ .+|.|++++.+.+.... .+. + ..+...+++++++++++ +++++++++||+++
T Consensus 53 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~----~-----~~~~~~~la~~l~~~~~-~~~~v~~~~ggsea 120 (427)
T 3fq8_A 53 RYIDYVGTWGPAICGHAHPEVIEALKVAMEKGT--SFG----A-----PCALENVLAEMVNDAVP-SIEMVRFVNSGTEA 120 (427)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS--CCS----S-----CCHHHHHHHHHHHHHST-TCSEEEEESSHHHH
T ss_pred EEEECCCchhhhccCCCCHHHHHHHHHHHHhCC--CcC----C-----CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHH
Confidence 456766553 22 48999999999886521 111 1 12455567789999998 67778889999999
Q ss_pred HHHHHHhh--cCCCCeeeecCCCCCcccCcccccccccccc------c------ceeeEEEecccCCCCCCCCHHHHHHH
Q 018401 122 NFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISA------V------SIFFETMPYRLNESTGYIDYDQLEKS 187 (356)
Q Consensus 122 ~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~------~------g~~~~~v~~~~~~~~~~~d~~~l~~~ 187 (356)
+..++... ...+++|++.++.|++...........+... . +..+..+ +.+ |+++|+++
T Consensus 121 ~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------d~~~le~~ 192 (427)
T 3fq8_A 121 CMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTT--PYN------DLEAVKAL 192 (427)
T ss_dssp HHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEE--ETT------CHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeec--CCC------CHHHHHHH
Confidence 99887433 2345788887766654432111110000000 0 0001111 111 89999999
Q ss_pred hhhc--CCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCC
Q 018401 188 ATLF--RPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHK 255 (356)
Q Consensus 188 i~~~--~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K 255 (356)
+++. ++++|++++++ +|.+.+ +++|.++|++||+++|+|++|+ |. ..+. ...+. ..|++++| |
T Consensus 193 l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~~-~~di~t~s--K 267 (427)
T 3fq8_A 193 FAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GF-RIAYGGVQEKFGV-TPDLTTLG--K 267 (427)
T ss_dssp HHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BT-TTBTTHHHHHTTC-CCSEEEEC--G
T ss_pred HHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchhhHhcCC-CCChhhhh--h
Confidence 8763 56777777443 577777 9999999999999999999996 33 1110 00110 25887776 9
Q ss_pred cCCCC-CceEEEEecCcchhccCCcchhhhHHHhhcccc--CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 256 SLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 256 ~l~gp-~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
++++. +.|+++.++ ++.+.+.... ......+.+....++..++++.+.++
T Consensus 268 ~~~~G~~~G~~~~~~--------------~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~ 320 (427)
T 3fq8_A 268 IIGGGLPVGAYGGKR--------------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQP 320 (427)
T ss_dssp GGGTTSSCEEEEECH--------------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTST
T ss_pred hhhCCcceEEEEEcH--------------HHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhc
Confidence 98643 448888876 4555443211 11111234778888888999888654
No 213
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.69 E-value=1.7e-17 Score=158.44 Aligned_cols=172 Identities=10% Similarity=0.015 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCc-cccCCCchHHHHHHHHhhcC----CCCeeeecCCCCCcccCccccccccccccccee
Q 018401 90 IDMAESLCQKRALEAFRLDPEK-WGGSLSGSPSNFQVYTALLK----PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 164 (356)
Q Consensus 90 ~~~l~~~~~~~la~~~g~~~~~-v~v~~sgs~a~~~~l~al~~----~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 164 (356)
...+++.+..++.+++|.+... ..+++++|+++.+++.+.++ +++.|+++...|.++.. ++.+.|..
T Consensus 96 ~~~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~k--------Al~l~Gl~ 167 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK--------SMVTAGFE 167 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH--------HHHHTTCE
T ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHH--------HHHHcCCe
Confidence 4567778889999999996543 34477777433334444433 38999999888887765 56678887
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcC--CcEEEE-cCCCCC--CcccHHHHHHHHHHcCCEEEEeccchhhhcccC-C
Q 018401 165 FETMPYRLNESTGYIDYDQLEKSATLFR--PKLIVA-GASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-V 238 (356)
Q Consensus 165 ~~~v~~~~~~~~~~~d~~~l~~~i~~~~--~k~v~l-~~~n~g--~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~-~ 238 (356)
.+.++...+.+.+.+|++.|++++.++. .+.+++ +++++| .+.|+++|+++|++||++++||+||++...... +
T Consensus 168 p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l 247 (450)
T 3bc8_A 168 PVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHL 247 (450)
T ss_dssp EEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHH
T ss_pred eEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhH
Confidence 7777544333456899999999997633 234444 476666 789999999999999999999999975332211 1
Q ss_pred CCCCC--CCccEEEeCCCCcCCCCCc-eEEEEec
Q 018401 239 IPSPF--EYADVVTTTTHKSLRGPRG-AMIFFRK 269 (356)
Q Consensus 239 ~~~~l--~~~D~~~~s~~K~l~gp~g-G~l~~~~ 269 (356)
....+ +++|+++.|+|||++.|.+ +++++++
T Consensus 248 ~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd 281 (450)
T 3bc8_A 248 IQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFN 281 (450)
T ss_dssp HHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESC
T ss_pred HHHHhcccCCCEEEECCccCCCchhccEEEEecC
Confidence 10112 3499999999999999988 6666665
No 214
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.69 E-value=6.7e-16 Score=149.26 Aligned_cols=234 Identities=9% Similarity=0.002 Sum_probs=137.0
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC----CC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK----PH 133 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~----~g 133 (356)
.+|.|.+++.+.+.... .+... ....+...+++++++++++...++++|++||++++..++.++.. +|
T Consensus 61 ~~p~v~~A~~~~~~~~~--~~~~~------~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G 132 (448)
T 3dod_A 61 RKKELDDAIKKQLGKIA--HSTLL------GMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIG 132 (448)
T ss_dssp SCHHHHHHHHHHHTTCS--CCCCS------SSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcc--Ccccc------ccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhC
Confidence 48999999999887521 11111 11224455677999999987777788899999999988888754 44
Q ss_pred ----CeeeecCCCCCcccCcccccc-----cccccccceeeEEEecccCCCCCCC-----------CHHHHHHHhh--hc
Q 018401 134 ----DRIMALDLPHGGHLSHGYQTD-----TKKISAVSIFFETMPYRLNESTGYI-----------DYDQLEKSAT--LF 191 (356)
Q Consensus 134 ----d~Vl~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~v~~~~~~~~~~~-----------d~~~l~~~i~--~~ 191 (356)
|+|++.++.|.+......... +.........+..++.+ ..+.. |+++|++++. ..
T Consensus 133 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 209 (448)
T 3dod_A 133 KPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP---YVYRSESGDPDECRDQCLRELAQLLEEHHE 209 (448)
T ss_dssp CTTCCEEEEEC-----------------------------CEEECCC---CCTTSSSCCHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC---ccccCCccchhhhhHHHHHHHHHHHHhCCC
Confidence 999999877654432111000 00000000112223221 11222 4888999887 22
Q ss_pred CCcEEEEcCC--C-CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCCCCcCCCC-
Q 018401 192 RPKLIVAGAS--A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGP- 260 (356)
Q Consensus 192 ~~k~v~l~~~--n-~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~~K~l~gp- 260 (356)
++++|++.+. + .|...+ +++|.++|++||+++|+|++|+ +|..... ....+. ..|++++| |+++++
T Consensus 210 ~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~-~~di~t~s--K~l~~G~ 286 (448)
T 3dod_A 210 EIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENV-QPDLMAAG--KGITGGY 286 (448)
T ss_dssp GEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTS
T ss_pred CEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCC-CCCEEEec--ccccCCc
Confidence 5677777743 4 565555 9999999999999999999986 3321110 001110 26888776 998654
Q ss_pred -CceEEEEecCcchhccCCcchhhhHHHhhccc------cCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 261 -RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA------VFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 261 -~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
+.|+++.++ ++.+.+... ...+...+.+.+..++..++|+.+.++
T Consensus 287 ~~ig~v~~~~--------------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~ 338 (448)
T 3dod_A 287 LPIAVTFATE--------------DIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESE 338 (448)
T ss_dssp SCCEEEEEEH--------------HHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEECH--------------HHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcc
Confidence 448888887 566655431 111122344667777778889887654
No 215
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.69 E-value=4.9e-17 Score=157.77 Aligned_cols=190 Identities=14% Similarity=0.123 Sum_probs=120.1
Q ss_pred HHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcCC-----C-
Q 018401 60 VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLKP-----H- 133 (356)
Q Consensus 60 ~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~~-----g- 133 (356)
+.|++++.+.+.... ..|+......++ ++++++++|. +++++++||++++..++.+++++ |
T Consensus 53 ~~v~~a~~~~l~~~~-------~~y~~~~~~~~l----~~~la~~~~~--~~v~~t~~gt~A~~~al~~~~~~~~~~~G~ 119 (467)
T 2oqx_A 53 GAVTQSMQAAMMRGD-------EAYSGSRSYYAL----AESVKNIFGY--QYTIPTHQGRGAEQIYIPVLIKKREQEKGL 119 (467)
T ss_dssp SCCCHHHHHHTTSCC-------CCSSSCHHHHHH----HHHHHHHHCC--SEEEEEC--CCSHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhccCc-------ceeccCchhHHH----HHHHHHHhCc--CcEEEcCCcHHHHHHHHHHHhccccccCCC
Confidence 788888887765311 123333444444 5788888886 35677999999999899988888 8
Q ss_pred ---CeeeecCCCCCcccCcccccccccccccceeeEEE----ecccC---CCCCCCCHHHHHHHhhh---cCCcEEEEc-
Q 018401 134 ---DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM----PYRLN---ESTGYIDYDQLEKSATL---FRPKLIVAG- 199 (356)
Q Consensus 134 ---d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v----~~~~~---~~~~~~d~~~l~~~i~~---~~~k~v~l~- 199 (356)
|+|++. ..|........ ...|...... +++.+ +.++.+|+++|++++++ .++++|+++
T Consensus 120 ~~~d~Ii~~-~~h~~t~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~ 191 (467)
T 2oqx_A 120 DRSKMVAFS-NYFFDTTQGHS-------QINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATI 191 (467)
T ss_dssp CTTTCEEEE-SSCCHHHHHHH-------HHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEES
T ss_pred CccceEEec-ccccccchhhh-------hccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEec
Confidence 997765 44532111111 0111111111 01111 12356899999999974 268999887
Q ss_pred CCC-C-CCc---ccHHHHHHHHHHcCCEEEEeccchh-hhc--------ccCCCCCCC-----CCccEEEeCCCCcCCCC
Q 018401 200 ASA-Y-ARL---YDYERIRKVCNKQKAIMLADMAHIS-GLV--------AAGVIPSPF-----EYADVVTTTTHKSLRGP 260 (356)
Q Consensus 200 ~~n-~-g~~---~~l~~I~~la~~~g~~vivD~a~~~-g~~--------~~~~~~~~l-----~~~D~~~~s~~K~l~gp 260 (356)
++| + |.+ .++++|+++|++||+++|+|++|+. +.. ..+.....+ ..+|++++|+||+++.|
T Consensus 192 ~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~ 271 (467)
T 2oqx_A 192 TSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVP 271 (467)
T ss_dssp SBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCS
T ss_pred cccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCC
Confidence 566 4 654 3588999999999999999999877 432 111110000 23788999999998777
Q ss_pred CceEEEEecC
Q 018401 261 RGAMIFFRKG 270 (356)
Q Consensus 261 ~gG~l~~~~~ 270 (356)
.||+++.+++
T Consensus 272 ~Gg~~~~~~~ 281 (467)
T 2oqx_A 272 MGGLLCMKDD 281 (467)
T ss_dssp SCEEEEECSG
T ss_pred CceEEEecCh
Confidence 6788887763
No 216
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.69 E-value=7e-16 Score=150.22 Aligned_cols=242 Identities=12% Similarity=0.010 Sum_probs=145.5
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhcC------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALLK------ 131 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~~------ 131 (356)
.+|.|++++.+.+.... ..+... ....+...+++++++++++.+.++++|++||++++..+++.+..
T Consensus 72 ~~p~v~~A~~~~~~~~~-~~~~~~------~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g 144 (472)
T 3hmu_A 72 GRDELAEVAARQMRELP-YYNTFF------KTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKG 144 (472)
T ss_dssp CCHHHHHHHHHHHHHCS-CCCSSS------SEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcc-cccccc------ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcC
Confidence 48999999999887521 112111 11224455677899999987777888899999999988887754
Q ss_pred --CCCeeeecCCCCCcccCccccc-----ccccc-cccceeeEEEeccc--CCCCCCCC--------HHHHHHHhhh---
Q 018401 132 --PHDRIMALDLPHGGHLSHGYQT-----DTKKI-SAVSIFFETMPYRL--NESTGYID--------YDQLEKSATL--- 190 (356)
Q Consensus 132 --~gd~Vl~~~~~~~~~~~~~~~~-----~~~~~-~~~g~~~~~v~~~~--~~~~~~~d--------~~~l~~~i~~--- 190 (356)
++++|++.++.|.+........ ++... ...+ +..++++. ...++ .| +++|++++.+
T Consensus 145 ~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~--~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~ 221 (472)
T 3hmu_A 145 QPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPD--VHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGE 221 (472)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSS--EEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG
T ss_pred CCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCC--cEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCC
Confidence 5688998887665432110000 00000 0112 33343222 10011 33 7888888863
Q ss_pred cCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCCCCcCCCC-
Q 018401 191 FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGP- 260 (356)
Q Consensus 191 ~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~~K~l~gp- 260 (356)
.++++|++.+.+ .|.+.+ +++|.++|++||+++|+|++|+ +|..... ....+ -..|++++| |+++|+
T Consensus 222 ~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~-v~pdi~t~s--K~l~gg~ 298 (472)
T 3hmu_A 222 NRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMG-IRPHIMTIA--KGLSSGY 298 (472)
T ss_dssp GGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHT-CCCSEEEEC--GGGTTTS
T ss_pred CCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhC-CCCceeeec--hhhhcCC
Confidence 256777777544 566666 9999999999999999999996 3322100 00001 026898877 998763
Q ss_pred -CceEEEEecCcchhccCCcchhhhHHHhhcccc-CCCCCCCCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 261 -RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV-FPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 261 -~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
+-|+++.++ ++.+.+.... ..+...+.|....+|..++|+.+.++.-.++.+
T Consensus 299 ~plG~v~~~~--------------~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~ 352 (472)
T 3hmu_A 299 APIGGSIVCD--------------EVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVR 352 (472)
T ss_dssp SCCEEEEEEH--------------HHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred cceEEEEECH--------------HHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 348888887 5666653211 111123445667777778898886543233344
No 217
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.69 E-value=1.1e-17 Score=158.06 Aligned_cols=166 Identities=12% Similarity=0.040 Sum_probs=118.7
Q ss_pred HHHHHHHHHcCCCCC-ccccCCCchHHHHHHHHhhcCC----CCeeeecCCCCCcccCcccccccccccccceeeEEEec
Q 018401 96 LCQKRALEAFRLDPE-KWGGSLSGSPSNFQVYTALLKP----HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 170 (356)
Q Consensus 96 ~~~~~la~~~g~~~~-~v~v~~sgs~a~~~~l~al~~~----gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 170 (356)
.+..|++.+ |.+.. ..++++++|.++.+++.+.+++ ||.|+++...|.+++. ++.+.|...+.++.
T Consensus 121 l~ld~L~~~-G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~k--------AliL~Gl~Pv~V~p 191 (501)
T 3hl2_A 121 LVLDIIKLA-GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK--------SMITAGFEPVVIEN 191 (501)
T ss_dssp HHHHHHHHT-TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH--------HHHHTTCEEEEECE
T ss_pred HHHHHHHHc-CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHH--------HHHHcCCeEEEEee
Confidence 466777776 98654 3344888887777677777664 4999999999988875 66688888877765
Q ss_pred ccCCCCCCCCHHHHHHHhhhcCC--cEEEEc-CCCCC--CcccHHHHHHHHHHcCCEEEEeccchhhhcccC-CCCCCCC
Q 018401 171 RLNESTGYIDYDQLEKSATLFRP--KLIVAG-ASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPFE 244 (356)
Q Consensus 171 ~~~~~~~~~d~~~l~~~i~~~~~--k~v~l~-~~n~g--~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~-~~~~~l~ 244 (356)
..+.+...+|++++++++.++.+ .++++. +++++ .+.|+++|+++|++||++++||+||++...... +....+.
T Consensus 192 ~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~ 271 (501)
T 3hl2_A 192 VLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGAR 271 (501)
T ss_dssp EEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHH
T ss_pred eecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHh
Confidence 45534458899999999987432 233333 55543 668999999999999999999999976542211 1111111
Q ss_pred -C-ccEEEeCCCCcCCCCCce-EEEEecC
Q 018401 245 -Y-ADVVTTTTHKSLRGPRGA-MIFFRKG 270 (356)
Q Consensus 245 -~-~D~~~~s~~K~l~gp~gG-~l~~~~~ 270 (356)
| +|+++.|+||++..|-|| +++++++
T Consensus 272 ~GrAD~vVqS~HK~llvpIGG~ii~~~d~ 300 (501)
T 3hl2_A 272 VGRIDAFVQSLDKNFMVPVGGAIIAGFND 300 (501)
T ss_dssp HSCCCEEEEEHHHHHCCCSSCEEEEESCH
T ss_pred cCCCcEEEecccccceeecCceEEEeCCH
Confidence 3 999999999999999885 5556663
No 218
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.67 E-value=9.5e-16 Score=147.46 Aligned_cols=234 Identities=13% Similarity=0.077 Sum_probs=144.6
Q ss_pred cCCeeecCC--C---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~--~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+. + ..+|.|.+++.+.+.... .+ . | ..++..+++++++++++ .++++++++||+++
T Consensus 57 ~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~--~~---~-~-----~~~~~~~l~~~la~~~~-~~~~v~~~~sgseA 124 (434)
T 2epj_A 57 RIVDLVLAYGPLILGHKHPRVLEAVEEALARGW--LY---G-A-----PGEAEVLLAEKILGYVK-RGGMIRFVNSGTEA 124 (434)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS--CC---S-S-----CCHHHHHHHHHHHHHHC-TTCEEEEESSHHHH
T ss_pred EEEEcccchhcccCCCCCHHHHHHHHHHHHhCC--CC---C-C-----CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHH
Confidence 356776553 2 258999999999887621 11 0 1 12344556788888885 45677789999999
Q ss_pred HHHHHHhh--cCCCCeeeecCCCCCcccCcccccccc-----c-ccccce------eeEEEecccCCCCCCCCHHHHHHH
Q 018401 122 NFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTK-----K-ISAVSI------FFETMPYRLNESTGYIDYDQLEKS 187 (356)
Q Consensus 122 ~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~-----~-~~~~g~------~~~~v~~~~~~~~~~~d~~~l~~~ 187 (356)
+..++.+. +.++++|++.++.|.+........... . ....|. .+..+ +. .|+++|+++
T Consensus 125 ~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~--~~------~d~~~le~~ 196 (434)
T 2epj_A 125 TMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVT--PY------NDVEALERV 196 (434)
T ss_dssp HHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEE--ET------TCHHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEec--CC------CCHHHHHHH
Confidence 99888762 345678888877765543211100000 0 001121 12222 22 289999999
Q ss_pred hhh--cCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCC----CCCCCCCccEEEeCCCC
Q 018401 188 ATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHK 255 (356)
Q Consensus 188 i~~--~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~----~~~~l~~~D~~~~s~~K 255 (356)
+++ .++++|++++.+ +|.+.+ +++|.++|++||+++|+|++|+ |. ..+. ...+ -..|++++| |
T Consensus 197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~-~~~di~s~s--K 271 (434)
T 2epj_A 197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GF-RLGLEGAQGYFN-IEGDIIVLG--K 271 (434)
T ss_dssp HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TT-TSSTTHHHHHHT-CCCSEEEEE--G
T ss_pred HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ce-eCCcchhhHHhC-CCCCeeeec--c
Confidence 874 267788887543 688877 9999999999999999999997 43 2111 0001 026887665 9
Q ss_pred cCCC-CCceEEEEecCcchhccCCcchhhhHHHhhcccc--CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 256 SLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 256 ~l~g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
++++ .+.|++++++ ++.+.+.... ......+.+....++..++++.+.++
T Consensus 272 ~l~~G~~~G~v~~~~--------------~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~ 324 (434)
T 2epj_A 272 IIGGGFPVGAVAGSR--------------EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEE 324 (434)
T ss_dssp GGGTTSSCEEEEECH--------------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHS
T ss_pred hhcCCcceeeeeecH--------------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 9865 3458888877 4444443211 11111245667778888889888653
No 219
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.67 E-value=3.7e-16 Score=149.83 Aligned_cols=233 Identities=12% Similarity=0.114 Sum_probs=142.0
Q ss_pred cCCeeecC---CC--CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPS---EN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~---~~--~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..+++.++ .+ ..+|.|++++.+.+.... +.+. .| ..++.+++++++++++|. +++++++||+++
T Consensus 58 ~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~---~~~~-~~-----~~~~~~~l~~~la~~~g~--~~v~~~~ggteA 126 (420)
T 2pb2_A 58 EYIDFAGGIAVTALGHCHPALVEALKSQGETLW---HTSN-VF-----TNEPALRLGRKLIDATFA--ERVLFMNSGTEA 126 (420)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCC---CCCT-TS-----CCHHHHHHHHHHHHHSSC--SEEEEESSHHHH
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhcc---cccC-cc-----CCHHHHHHHHHHHhhCCC--CeEEEeCCHHHH
Confidence 35666544 22 358999999999886521 1111 11 123455677899999873 567779999999
Q ss_pred HHHHHHhhcC-------CC-CeeeecCCCCCcccCcccccccccccccc-----eeeEEEecccCCCCCCCCHHHHHHHh
Q 018401 122 NFQVYTALLK-------PH-DRIMALDLPHGGHLSHGYQTDTKKISAVS-----IFFETMPYRLNESTGYIDYDQLEKSA 188 (356)
Q Consensus 122 ~~~~l~al~~-------~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~v~~~~~~~~~~~d~~~l~~~i 188 (356)
+..++.++.. +| ++|+++++.|.+................+ ..+..+ +. .|+++|++++
T Consensus 127 ~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~--~~------~d~~~le~~i 198 (420)
T 2pb2_A 127 NETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHV--PF------NDLHAVKAVM 198 (420)
T ss_dssp HHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEE--CT------TCHHHHHHHC
T ss_pred HHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEe--cC------CCHHHHHHHh
Confidence 9988888764 67 48999887765543211100000000000 012222 21 3899999999
Q ss_pred hhcCCcEEEEcCC-C-CCC----cccHHHHHHHHHHcCCEEEEeccchhhhcccCCC----CCCCCCccEEEeCCCCcCC
Q 018401 189 TLFRPKLIVAGAS-A-YAR----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHKSLR 258 (356)
Q Consensus 189 ~~~~~k~v~l~~~-n-~g~----~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~----~~~l~~~D~~~~s~~K~l~ 258 (356)
++ ++++|+++++ | +|. ..++++|.++|++||+++|+|++|+ |....+.. ..+ ...|++++ +|+++
T Consensus 199 ~~-~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~-g~~~~g~~~~~~~~~-~~~diit~--sK~l~ 273 (420)
T 2pb2_A 199 DD-HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQC-GMGRTGDLFAYMHYG-VTPDILTS--AKALG 273 (420)
T ss_dssp CT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHT-CCCSEEEE--CGGGG
T ss_pred cc-CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCc-CcccCCcHHHHHhcC-CCCCeEEe--ccccc
Confidence 86 8999998843 3 343 3578999999999999999999994 43221110 001 02688865 59987
Q ss_pred CCC-ceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 259 GPR-GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 259 gp~-gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
++. .|++++++ ++.+.+..... ....+.+.+..+++.++|+.+.+
T Consensus 274 ~G~~iG~~~~~~--------------~l~~~l~~~~~-~~t~~~~~~~~aa~~a~L~~~~~ 319 (420)
T 2pb2_A 274 GGFPVSAMLTTQ--------------EIASAFHVGSH-GSTYGGNPLACAVAGAAFDIINT 319 (420)
T ss_dssp TTSCCEEEEECH--------------HHHTTCC-----CCEECCCHHHHHHHHHHHHHHSS
T ss_pred CCCceEEEEEhH--------------HHHHhhcCCCc-CcccCcCHHHHHHHHHHHHHHHh
Confidence 543 38888876 44443332111 11124566777777788988765
No 220
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.66 E-value=7.1e-16 Score=148.17 Aligned_cols=232 Identities=12% Similarity=0.033 Sum_probs=140.0
Q ss_pred cCCeeecCC--CC---CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSE--NF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~--~~---~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
+.+++.++. ++ .+|.|++++.+.+..... ++... ....+++++++++++ .+++++|++||+++
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~-------~~~~~----~~~~~l~~~la~~~~-~~~~v~~~~~Gsea 121 (429)
T 3k28_A 54 EYIDYVLSWGPLIHGHANDRVVEALKAVAERGTS-------FGAPT----EIENKLAKLVIERVP-SIEIVRMVNSGTEA 121 (429)
T ss_dssp EEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSC-------CSSCC----HHHHHHHHHHHHHST-TCSEEEEESSHHHH
T ss_pred EEEECCCChhhcccCCCCHHHHHHHHHHHhhCcC-------cCCCC----HHHHHHHHHHHHhCC-CCCEEEEeCChHHH
Confidence 456766543 22 489999999998876221 11111 233445688888887 56778889999999
Q ss_pred HHHHHHhhcC--CCCeeeecCCCCCcccCccccccccccc------cc------ceeeEEEecccCCCCCCCCHHHHHHH
Q 018401 122 NFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKIS------AV------SIFFETMPYRLNESTGYIDYDQLEKS 187 (356)
Q Consensus 122 ~~~~l~al~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~------~~------g~~~~~v~~~~~~~~~~~d~~~l~~~ 187 (356)
+..++..+.. ++++|++.++.|.+.............. .. +..+..+ +. -|+++|+++
T Consensus 122 ~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~d~~~le~~ 193 (429)
T 3k28_A 122 TMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITV--AY------NDLESVKYA 193 (429)
T ss_dssp HHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEE--ET------TCHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeec--CC------CCHHHHHHH
Confidence 9988877643 6788888876665432211100000000 00 0011111 11 179999998
Q ss_pred hhh--cCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCCC----CCCCCCccEEEeCCCC
Q 018401 188 ATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHK 255 (356)
Q Consensus 188 i~~--~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~~----~~~l~~~D~~~~s~~K 255 (356)
+.+ .++++|++.+++ .|.+.+ +++|.++|++||+++|+|++|. |. ..+.. ..+ ...|++++| |
T Consensus 194 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~-~~~di~t~s--K 268 (429)
T 3k28_A 194 FEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMT-GF-RVAYNCGQGYYG-VTPDLTCLG--K 268 (429)
T ss_dssp HHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TT-TSSTTHHHHHHT-CCCSEEEEC--G
T ss_pred HHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchHHHHhC-CCCceehhh--h
Confidence 873 256777777544 566766 9999999999999999999994 32 11100 000 026787766 9
Q ss_pred cCCCC-CceEEEEecCcchhccCCcchhhhHHHhhcccc--CCCCCCCCcHHHHHHHHHHHHHHh
Q 018401 256 SLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTITGLAVALKQVC 317 (356)
Q Consensus 256 ~l~gp-~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~gt~~~~~~~al~~Al~~~~ 317 (356)
+++++ +.|+++.++ ++.+.+.... ......+.+....++..++++.+.
T Consensus 269 ~~~~G~~iG~~~~~~--------------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~ 319 (429)
T 3k28_A 269 VIGGGLPVGAYGGKA--------------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT 319 (429)
T ss_dssp GGGTTSCCEEEEECH--------------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC
T ss_pred hhcCCCCeEEEEEcH--------------HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH
Confidence 98653 338888877 4555443211 111223556677777778887654
No 221
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.66 E-value=7e-16 Score=146.49 Aligned_cols=224 Identities=14% Similarity=0.123 Sum_probs=142.5
Q ss_pred CCeeecC--CC---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHH
Q 018401 48 GLELIPS--EN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSN 122 (356)
Q Consensus 48 ~i~L~~~--~~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~ 122 (356)
.+++..+ .+ +.+|++++++.+.+.... .... .| ..+..+++++.+++++| ++++++++||++++
T Consensus 42 ~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~---~~~~-~~-----~~~~~~~l~~~la~~~g--~~~v~~~~gg~~a~ 110 (397)
T 2ord_A 42 YLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLI---HCSN-LF-----WNRPQMELAELLSKNTF--GGKVFFANTGTEAN 110 (397)
T ss_dssp EEESSHHHHTCTTCBTCHHHHHHHHHHHHHCS---CCCT-TS-----EEHHHHHHHHHHHHTTT--SCEEEEESSHHHHH
T ss_pred EEECCccccccccCCCCHHHHHHHHHHHHhcc---cCcc-cc-----CCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHH
Confidence 4566543 12 358999999999887521 1111 11 12344567789999988 35677799999999
Q ss_pred HHHHHhhcC------C-CCeeeecCCCCCcccCccccccccccccccee------------eEEEecccCCCCCCCCHHH
Q 018401 123 FQVYTALLK------P-HDRIMALDLPHGGHLSHGYQTDTKKISAVSIF------------FETMPYRLNESTGYIDYDQ 183 (356)
Q Consensus 123 ~~~l~al~~------~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~~~~d~~~ 183 (356)
..++.++.. + ++.|+++++.|.+..... +...|.. +..+ +. .|+++
T Consensus 111 ~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~-------~~~~g~~~~~~~~~p~~~~~~~~--~~------~d~~~ 175 (397)
T 2ord_A 111 EAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGS-------LTATGQPKYQKPFEPLVPGFEYF--EF------NNVED 175 (397)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHH-------HHHSBCHHHHGGGCSCCTTEEEE--CT------TCHHH
T ss_pred HHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhh-------hhccCChhhccccCCCCCCeeEe--cC------CCHHH
Confidence 988887753 5 478888886664432211 1112221 2223 22 28999
Q ss_pred HHHHhhhcCCcEEEEc-CCC-CCC----cccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCC---C-CccEEEeCC
Q 018401 184 LEKSATLFRPKLIVAG-ASA-YAR----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---E-YADVVTTTT 253 (356)
Q Consensus 184 l~~~i~~~~~k~v~l~-~~n-~g~----~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l---~-~~D~~~~s~ 253 (356)
|++++++ ++++|+++ ++| +|. ..++++|.++|++||+++|+|++|+ |....+. ...+ + ..|++++
T Consensus 176 l~~~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~-~~~~~~~~~~~d~~s~-- 250 (397)
T 2ord_A 176 LRRKMSE-DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-GMGRTGK-LFAYQKYGVVPDVLTT-- 250 (397)
T ss_dssp HHHHCCT-TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSS-SSHHHHHTCCCSEEEE--
T ss_pred HHHHhhc-CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCcc-chhhhhhCCCCCeeee--
Confidence 9999986 89999998 555 787 3578999999999999999999996 4322111 0100 1 2688766
Q ss_pred CCcCCCCCc-eEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 254 HKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 254 ~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
+|+++++.. |+++++++ +. .+.... .....+.+.+..+++.++++.+.+
T Consensus 251 sK~~~~G~r~G~~~~~~~--------------~~-~l~~~~-~~~~~~~~~~~~~a~~~~l~~~~~ 300 (397)
T 2ord_A 251 AKGLGGGVPIGAVIVNER--------------AN-VLEPGD-HGTTFGGNPLACRAGVTVIKELTK 300 (397)
T ss_dssp CGGGGTTSCCEEEEECST--------------TC-CCCTTS-SCCSSTTCHHHHHHHHHHHHHHTS
T ss_pred ccccCCCcCeEEEEEchH--------------hc-ccCCCC-cCCCCCCCHHHHHHHHHHHHHHHh
Confidence 599975444 88888774 22 222111 111234567777888888988765
No 222
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.65 E-value=2.5e-15 Score=144.07 Aligned_cols=234 Identities=14% Similarity=0.033 Sum_probs=143.1
Q ss_pred cCCeeecCC--C---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~--~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+. + ..+|.|++++.+.+.... .+. | ..++..+++++++++++ .++++++++||+++
T Consensus 53 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~----~-----~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~ea 120 (424)
T 2e7u_A 53 RYLDYVMSWGPLILGHAHPKVLARVRETLERGL--TFG----A-----PSPLEVALAKKVKRAYP-FVDLVRFVNSGTEA 120 (424)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS--CCS----S-----CCHHHHHHHHHHHHHCT-TCCEEEEESSHHHH
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCC--CCC----C-----CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHH
Confidence 356776553 2 358999999999887521 110 1 12345567788899886 56777789999999
Q ss_pred HHHHHHh--hcCCCCeeeecCCCCCcccCccccccccc------cccccee----eEEEecccCCCCCCCCHHHHHHHhh
Q 018401 122 NFQVYTA--LLKPHDRIMALDLPHGGHLSHGYQTDTKK------ISAVSIF----FETMPYRLNESTGYIDYDQLEKSAT 189 (356)
Q Consensus 122 ~~~~l~a--l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~------~~~~g~~----~~~v~~~~~~~~~~~d~~~l~~~i~ 189 (356)
+..+++. .+.+++.|++.++.|++............ ....|.. ...++++. .|+++|+++++
T Consensus 121 ~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~~le~~l~ 194 (424)
T 2e7u_A 121 TMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY------NDPEGLREVLK 194 (424)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT------TCHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC------CCHHHHHHHHH
Confidence 9988875 23445788888877665432111000000 0011210 01122122 38999999887
Q ss_pred h--cCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCCC----CCCCCCccEEEeCCCCcC
Q 018401 190 L--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHKSL 257 (356)
Q Consensus 190 ~--~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~~----~~~l~~~D~~~~s~~K~l 257 (356)
+ .++++|+++|.+ +|.+.+ +++|.++ ++||+++|+|++|+ |. ..+.. ..+ ...|++++ +|+|
T Consensus 195 ~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~-~~~di~s~--sK~l 268 (424)
T 2e7u_A 195 RRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GF-RLAFGGATELLG-LKPDLVTL--GKIL 268 (424)
T ss_dssp HHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TT-TSSTTHHHHHHT-CCCSEEEE--CGGG
T ss_pred hCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-cc-ccchhHHHHHhC-CCcchhhh--hhhh
Confidence 3 256777777544 687777 9999999 99999999999997 44 21110 001 02687755 5998
Q ss_pred CCC-CceEEEEecCcchhccCCcchhhhHHHhhcccc--CCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 258 RGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 258 ~gp-~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
+++ +.|+++.++ ++.+.+.... ......+.|....++..++++.+.+
T Consensus 269 ~~G~~~G~~~~~~--------------~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~ 318 (424)
T 2e7u_A 269 GGGLPAAAYAGRR--------------EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE 318 (424)
T ss_dssp GTTSSCEEEEECH--------------HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH
T ss_pred hCCcceEEEEEcH--------------HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 753 458888877 4555443311 1111124566777788888988765
No 223
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.65 E-value=2e-15 Score=146.12 Aligned_cols=232 Identities=13% Similarity=0.080 Sum_probs=137.9
Q ss_pred cCCeeecCC--C---CCcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHH
Q 018401 47 KGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPS 121 (356)
Q Consensus 47 ~~i~L~~~~--~---~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a 121 (356)
..|++..+. + ..+|.|.+++.+.+.... .+ + ...+++++++++++++++ .++++++++||+++
T Consensus 58 ~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~--~~------~---~~~~~~~~la~~l~~~~~-~~~~v~~~~gg~eA 125 (453)
T 2cy8_A 58 VYLDFFGGHGALVLGHGHPRVNAAIAEALSHGV--QY------A---ASHPLEVRWAERIVAAFP-SIRKLRFTGSGTET 125 (453)
T ss_dssp EEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC--SS------C---SSCHHHHHHHHHHHHHCT-TCSEEEEESCHHHH
T ss_pred EEEECcccHhhcccCCCCHHHHHHHHHHHHhCC--CC------C---CCCHHHHHHHHHHHhhCC-CCCEEEEeCCHHHH
Confidence 356776553 2 358999999999886521 11 1 123567778899999987 66777789999999
Q ss_pred HHHHHHh---hcCCCCeeeecCCCCCcccCcccccccc--c-ccccceee----EEEecccCCCCCCCCHHHHHHHhhh-
Q 018401 122 NFQVYTA---LLKPHDRIMALDLPHGGHLSHGYQTDTK--K-ISAVSIFF----ETMPYRLNESTGYIDYDQLEKSATL- 190 (356)
Q Consensus 122 ~~~~l~a---l~~~gd~Vl~~~~~~~~~~~~~~~~~~~--~-~~~~g~~~----~~v~~~~~~~~~~~d~~~l~~~i~~- 190 (356)
+..++++ +.+ ++.|++.++.|++........... . ....|... ..+.++. .|+++|++++++
T Consensus 126 ~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~d~~~le~~l~~~ 198 (453)
T 2cy8_A 126 TLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP------DDIEGMREVFANH 198 (453)
T ss_dssp HHHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEECT------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC------CCHHHHHHHHHhc
Confidence 9988887 554 467888776665433211100000 0 00012110 0111121 389999999874
Q ss_pred -cCCcEEEEcCCC--CCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccCCC----CCCCCCccEEEeCCCCcCCC
Q 018401 191 -FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHKSLRG 259 (356)
Q Consensus 191 -~~~k~v~l~~~n--~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~~~----~~~l~~~D~~~~s~~K~l~g 259 (356)
.++++|++++.+ +|.+.+ +++|.++|++||+++|+|++|+ |. ..+.. ..+ -..|++++| |+|++
T Consensus 199 ~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~-~~~di~s~s--K~l~~ 273 (453)
T 2cy8_A 199 GSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GF-RVGNHGMQALLD-VQPDLTCLA--KASAG 273 (453)
T ss_dssp GGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TT-TTCTTHHHHHHT-CCCSEEEEE--GGGGT
T ss_pred CCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-cc-ccCchhhhHHhC-CCCcEEEEC--hhhhC
Confidence 267788877543 687777 9999999999999999999997 54 21110 001 026887655 99875
Q ss_pred -CCceEEEEecCcchhccCCcchhhhHHHhhcc---c-cCCCCCCCCcHHHHHHHHHHHHH-H
Q 018401 260 -PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQ---A-VFPGLQGGPHNHTITGLAVALKQ-V 316 (356)
Q Consensus 260 -p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~---~-~~~~~~gt~~~~~~~al~~Al~~-~ 316 (356)
.+.|++++++ ++.+.+.. . .......+.|....++..++++. +
T Consensus 274 G~~~G~v~~~~--------------~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~ 322 (453)
T 2cy8_A 274 GLPGGILGGRE--------------DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL 322 (453)
T ss_dssp TSSCEEEEECH--------------HHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH
T ss_pred CcceEEEechH--------------HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh
Confidence 3559998887 44444332 0 00111124566777788888987 6
No 224
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.65 E-value=3.3e-15 Score=144.72 Aligned_cols=244 Identities=11% Similarity=-0.010 Sum_probs=140.4
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchHHHHHHHHhhc--CCCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSPSNFQVYTALL--KPHD 134 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~a~~~~l~al~--~~gd 134 (356)
.+|.|++++.+.+.... .+... ....+...+++++++++++.+ .++++|++||++++..+++.+. ..++
T Consensus 81 ~~p~v~~A~~~~~~~~~--~~~~~------~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~~ 152 (453)
T 4ffc_A 81 SHPAVAAAIADQATHFT--HTCFM------VTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGRP 152 (453)
T ss_dssp TCHHHHHHHHHHHHHCS--CCTTT------TSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHHhcc--ccccC------cCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCCC
Confidence 48999999999887521 12111 112345556779999999864 4677889999999998887654 3568
Q ss_pred eeeecCCCCCcccCcccc------cccccccccceeeEEEecccCC-CCCCCC--------HHHHHHHhhhcCCcEEEEc
Q 018401 135 RIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLNE-STGYID--------YDQLEKSATLFRPKLIVAG 199 (356)
Q Consensus 135 ~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~~-~~~~~d--------~~~l~~~i~~~~~k~v~l~ 199 (356)
.|++.++.|++....... .++.........+..++++... +....+ ++.|++.+...++.+|++.
T Consensus 153 ~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~e 232 (453)
T 4ffc_A 153 AVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIE 232 (453)
T ss_dssp EEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEEC
T ss_pred EEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEc
Confidence 899888776644311100 0111110111123334433210 111122 4556666654345666666
Q ss_pred CCC-C-CCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccCC--CCCCCCCccEEEeCCCCcCCCC-CceEEEEec
Q 018401 200 ASA-Y-ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLRGP-RGAMIFFRK 269 (356)
Q Consensus 200 ~~n-~-g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~~--~~~~l~~~D~~~~s~~K~l~gp-~gG~l~~~~ 269 (356)
|.+ + |...+ +++|.++|++||+++|+|++|+ +|...... ...+ ...|++++| |+++++ +.|+++.++
T Consensus 233 p~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~-~~pdi~t~s--K~~~~G~~~G~~~~~~ 309 (453)
T 4ffc_A 233 PIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEG-IVPDIVTMA--KGIAGGMPLSAVTGRA 309 (453)
T ss_dssp SSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHT-CCCSEEEEC--GGGGTTSSCEEEEEEH
T ss_pred CCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcC-CCcchHhhh--hhhcCCcCeEEEEECH
Confidence 655 4 55554 9999999999999999999985 32211000 0001 026888776 988553 338888877
Q ss_pred CcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 270 GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
++.+.+....... ..+.+.+..++..++|+.+.++.-.++.++
T Consensus 310 --------------~i~~~~~~~~~~~-t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 352 (453)
T 4ffc_A 310 --------------ELMDAVYAGGLGG-TYGGNPVTCAAAVAALGVMRELDLPARARA 352 (453)
T ss_dssp --------------HHHTTSCTTSSCC-SSSSCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred --------------HHHhhhcccCcCC-CCCcCHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 4555444322112 233456667777788888765432334443
No 225
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.64 E-value=3e-16 Score=155.39 Aligned_cols=225 Identities=12% Similarity=0.062 Sum_probs=143.3
Q ss_pred ccccccCh--HHHHHHHHHHHHHH---------cCCeeecCCCC-CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHH
Q 018401 25 APLEVVDP--EIADIIEHEKARQW---------KGLELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 92 (356)
Q Consensus 25 ~~~~~~~~--~~~~~~~~~~~~~~---------~~i~L~~~~~~-~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 92 (356)
..+..+++ +++.++.+..+... +.|+|..+++. +++.+++++.+.+.. .+|+.. .+...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~l~~g~~~~~~~~~~~al~~~~~~---~~Y~~~------~g~~~ 142 (546)
T 2zy4_A 72 VGVGGLAKIDGIEGRFERYIAENRDQEGVRFLGKSLSYVRDQLGLDPAAFLHEMVDGILG---CNYPVP------PRMLN 142 (546)
T ss_dssp SCEEECCCSTTHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHT---CSCCSS------SSCCH
T ss_pred hhhccCCccccchhHHHHHHHhcCCCCcchhHHhhhecccCCCCCCChHHHHHHHHhhhc---CCCCCC------cCCHH
Confidence 34555555 77887777654431 24666555553 456677777776642 134433 22234
Q ss_pred HHHH-HHHHHHHHcCC-----CCCccccCCCchHHHHHHHHh-----hcCCCCeeeecCCCCCcccCccccccccccccc
Q 018401 93 AESL-CQKRALEAFRL-----DPEKWGGSLSGSPSNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 161 (356)
Q Consensus 93 l~~~-~~~~la~~~g~-----~~~~v~v~~sgs~a~~~~l~a-----l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 161 (356)
++++ ++.++.+.++. ++++|++++|+++++..++.+ +++|||.|+++++.|.++.. .+.+.
T Consensus 143 lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~--------~~~~~ 214 (546)
T 2zy4_A 143 ISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIE--------IPELA 214 (546)
T ss_dssp HHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHH--------HHHST
T ss_pred HHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHH--------HHHHc
Confidence 5544 44555665543 346777798999999878776 57899999999976654432 22222
Q ss_pred --ceeeEEEecccCCC-CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc---HHHHHHHH--HHcCCEEEEeccchh
Q 018401 162 --SIFFETMPYRLNES-TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVC--NKQKAIMLADMAHIS 231 (356)
Q Consensus 162 --g~~~~~v~~~~~~~-~~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~I~~la--~~~g~~vivD~a~~~ 231 (356)
|.+++.+ +.+++ ++.+|+++|++++.+ ++++|+++ ++| +|.+.+ +++|.++| +++|+++|+|++++.
T Consensus 215 ~~g~~~~~v--~~~~~~~~~~d~~~l~~~~~~-~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~ 291 (546)
T 2zy4_A 215 QYALEEVAI--NADPSLNWQYPDSELDKLKDP-AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGT 291 (546)
T ss_dssp TSCCEEEEE--ECBGGGTTBCCHHHHGGGGST-TEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGG
T ss_pred CCCcEEEEE--ecCcccCCCCCHHHHHHhhCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchh
Confidence 3444444 44433 357999999887765 78999887 777 897766 56678888 789999999999874
Q ss_pred hhcc-cCCCCCCCCCccEEEeCCCCcCC--CCCceEEEEecC
Q 018401 232 GLVA-AGVIPSPFEYADVVTTTTHKSLR--GPRGAMIFFRKG 270 (356)
Q Consensus 232 g~~~-~~~~~~~l~~~D~~~~s~~K~l~--gp~gG~l~~~~~ 270 (356)
.... ..+... ..+.++++.|++|+++ |.+.|+++.+++
T Consensus 292 ~~~~~~s~~~~-~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 292 FADDFQSLFAI-CPENTLLVYSFSKYFGATGWRLGVVAAHQQ 332 (546)
T ss_dssp GSTTCCCHHHH-CGGGEEEEEESTTTTTCGGGCEEEEEEESS
T ss_pred hcccCcCHHHh-CCCCEEEEEeCccccCCCCcceEEEEECCH
Confidence 3211 000000 0135789999999774 223499998874
No 226
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.63 E-value=4.4e-15 Score=143.70 Aligned_cols=236 Identities=10% Similarity=-0.004 Sum_probs=136.6
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchHHHHHHHHhhcC--CCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSPSNFQVYTALLK--PHD 134 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~a~~~~l~al~~--~gd 134 (356)
.+|.|.+++.+.+.... .+... ....+...+++++++++++.+ .++++|++||++++..+++.+.. .++
T Consensus 78 ~~p~v~~A~~~~~~~~~--~~~~~------~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~~ 149 (451)
T 3oks_A 78 SAPKVVEAVRSQVGDFT--HTCFM------VTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHKP 149 (451)
T ss_dssp TCHHHHHHHHHHHTTCS--CCTTT------TSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHHhcc--cccCC------ccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCCC
Confidence 48999999999886521 11111 112244556778999998764 46777899999999988876643 458
Q ss_pred eeeecCCCCCcccCcccc------cccccccccceeeEEEecccC-------CCCC---CCCHHHHHHHhh----hcCCc
Q 018401 135 RIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLN-------ESTG---YIDYDQLEKSAT----LFRPK 194 (356)
Q Consensus 135 ~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~-------~~~~---~~d~~~l~~~i~----~~~~k 194 (356)
.|++.+..|++....... .++.........+..++++.. .+.. ..+++.+++.+. ..+++
T Consensus 150 ~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~a 229 (451)
T 3oks_A 150 AVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLA 229 (451)
T ss_dssp EEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEE
T ss_pred eEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEE
Confidence 888888776644311100 111111111112334443310 0000 113454545443 22456
Q ss_pred EEEEcCCC-C-CCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEeCCCCcCCCC-CceE
Q 018401 195 LIVAGASA-Y-ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGP-RGAM 264 (356)
Q Consensus 195 ~v~l~~~n-~-g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~s~~K~l~gp-~gG~ 264 (356)
+|++.|.+ + |...+ +++|.++|++||+++|+|++|+ +|..... ....+ -..|++++| |+++++ +-|+
T Consensus 230 avi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~-~~pdi~t~s--K~l~~G~~iG~ 306 (451)
T 3oks_A 230 AVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEG-IDPDLIVTA--KGIAGGLPLSA 306 (451)
T ss_dssp EEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSEEEEC--GGGGTTSSCEE
T ss_pred EEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcC-CCCCeeeeh--hhhhCCcceEE
Confidence 77776555 3 55555 9999999999999999999986 3221100 01111 026888776 998653 3388
Q ss_pred EEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 265 IFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 265 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
++.++ ++.+.+....... ..+.+.+..++..++|+.+.++
T Consensus 307 v~~~~--------------~~~~~~~~~~~~~-t~~~~~~~~aaa~aal~~~~~~ 346 (451)
T 3oks_A 307 VTGRA--------------EIMDSPHVSGLGG-TYGGNPIACAAALATIETIESE 346 (451)
T ss_dssp EEEEH--------------HHHTCSCTTSBCC-SSSSCHHHHHHHHHHHHHHHHT
T ss_pred EEECH--------------HHHhhhcCCCcCC-CCCCCHHHHHHHHHHHHHHhhh
Confidence 88877 4555443322112 2344566777777889887654
No 227
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.62 E-value=2.4e-15 Score=145.55 Aligned_cols=231 Identities=9% Similarity=-0.001 Sum_probs=136.4
Q ss_pred CcHHHH-H-HHHh---hhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcC-CCCCccccCCCchHHHHHHHHhhc-
Q 018401 58 TSVSVM-Q-AVGS---VMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGGSLSGSPSNFQVYTALL- 130 (356)
Q Consensus 58 ~~~~V~-~-a~~~---~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g-~~~~~v~v~~sgs~a~~~~l~al~- 130 (356)
.+|.|+ + ++.+ .+.... .+. .. | ..+...++++.++++++ .++++++|++||++++..++..+.
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~~~--~~~-~~-~-----~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~ 141 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAALNK--PSN-SD-V-----YSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFD 141 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHTCC--CCT-TT-C-----CCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcC--CCC-cc-c-----CCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHH
Confidence 489999 9 9988 665421 111 11 1 11334456688888887 466778889999999998876542
Q ss_pred --C----------C-CCeeeecCCCCCcccCccccccc------ccccccceeeEEEecccCCC-CC--------CCCHH
Q 018401 131 --K----------P-HDRIMALDLPHGGHLSHGYQTDT------KKISAVSIFFETMPYRLNES-TG--------YIDYD 182 (356)
Q Consensus 131 --~----------~-gd~Vl~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~v~~~~~~~-~~--------~~d~~ 182 (356)
. + ||+|++.++.|++.......... .+..-....+ +.++.+.. .. ..+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~ 219 (449)
T 2cjg_A 142 WKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPR--IDAPYMRPGLDEPAMAALEAEALR 219 (449)
T ss_dssp HHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCE--ECCCCCCTTCCHHHHHHHHHHHHH
T ss_pred HhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCc--EEEcCCCchhhccccchhhHHHHH
Confidence 2 2 89999999877665432221110 0110000112 22233310 01 24567
Q ss_pred HHHHHhhh--cCCcEEEEcCC-C-CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccC--CCCCCCCCccEEEe
Q 018401 183 QLEKSATL--FRPKLIVAGAS-A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTT 251 (356)
Q Consensus 183 ~l~~~i~~--~~~k~v~l~~~-n-~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~--~~~~~l~~~D~~~~ 251 (356)
+|++++.+ .++++|++++. | +|...+ +++|.++|++||+++|+|++|+ +|..... ....+ -..|++++
T Consensus 220 ~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~-~~~di~t~ 298 (449)
T 2cjg_A 220 QARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLD-VAPDIVAF 298 (449)
T ss_dssp HHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHT-CCCSEEEE
T ss_pred HHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccC-CCceEEEe
Confidence 78888862 26788888754 3 686666 9999999999999999999997 3322110 00001 03688876
Q ss_pred CCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHhhcc----ccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018401 252 TTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQ----AVFPGLQGGPHNHTITGLAVALKQVCTL 319 (356)
Q Consensus 252 s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~gt~~~~~~~al~~Al~~~~~~ 319 (356)
| |+| | -|+++++++ +.+.+.. ........+.|.+..+|..++|+.+.++
T Consensus 299 s--K~l--~-iG~~~~~~~--------------~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~ 351 (449)
T 2cjg_A 299 G--KKT--Q-VCGVMAGRR--------------VDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAE 351 (449)
T ss_dssp C--GGG--S-SEEEEECGG--------------GGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHH
T ss_pred c--Ccc--c-EEEEEECHH--------------HhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhc
Confidence 6 988 4 466777763 3332111 0011112344677778888999887653
No 228
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.55 E-value=4.8e-14 Score=135.75 Aligned_cols=231 Identities=15% Similarity=0.104 Sum_probs=136.9
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhh--cCCCCe
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTAL--LKPHDR 135 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al--~~~gd~ 135 (356)
-+|+|.+++.+.+..... + + ..+. ++.++.+.+++.+.. .+.+.|++||++|++.+++.. ....++
T Consensus 104 ~hp~v~~Av~~q~~~~~~--~-~----~~~~----~~~~lae~l~~~~p~-~~~v~f~~SGsEA~e~AiklAr~~tgr~~ 171 (454)
T 4ao9_A 104 SAPEIRDAVIEAMQGGIN--L-T----GHNL----LEGRLARLICERFPQ-IEQLRFTNSGTEANLMALTAALHFTGRRK 171 (454)
T ss_dssp CCHHHHHHHHHHHHTCSC--C-C----SEES----SHHHHHHHHHHHSTT-CSEEEEESSHHHHHHHHHHHHHHHHTCCE
T ss_pred CCHHHHHHHHHHHhcCCC--c-c----CCcH----HHHHHHHHHHHhCCC-CCEEEEeCchHHHHHHHHHHHHhcccCCe
Confidence 379999999998876321 1 1 1111 223445777877753 446677999999999888765 234567
Q ss_pred eeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc--CCCCCCccc---
Q 018401 136 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG--ASAYARLYD--- 208 (356)
Q Consensus 136 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~--~~k~v~l~--~~n~g~~~~--- 208 (356)
|+.....|.+... +. ...... .........++. -|++.+++.+.++ ++.+|++. ..+.|.+.|
T Consensus 172 ii~~~~~yHG~t~-~~-~~~~~~--~~~~~~~~~~p~------nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~ 241 (454)
T 4ao9_A 172 IVVFSGGYHGGVL-GF-GARPSP--TTVPFDFLVLPY------NDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPD 241 (454)
T ss_dssp EEEETTCBCSTTC-BB-SSSBCT--TSCCSEEEEECT------TCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHH
T ss_pred EEEEeCCcCCccc-cc-cccccC--ccCCCCcccCCC------chHHHHHHHHhhcCCceEEEEeccccCCCCccCCchh
Confidence 7777655443321 11 000000 011112222232 2788998888752 45677776 344676665
Q ss_pred -HHHHHHHHHHcCCEEEEeccchhhhcccCC--CCCCCCCccEEEeCCCCcCCCCCc-eEEEEecCcchhccCCcchhhh
Q 018401 209 -YERIRKVCNKQKAIMLADMAHISGLVAAGV--IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYD 284 (356)
Q Consensus 209 -l~~I~~la~~~g~~vivD~a~~~g~~~~~~--~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~ 284 (356)
+++|.++|++||+++|+|++|+ |-..... ...++ ..|+++++ |.++|.-. |++..++ +
T Consensus 242 fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv-~PDi~t~g--K~lggG~Piga~~~~~--------------e 303 (454)
T 4ao9_A 242 FLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGI-RSDLTTLG--KYIGGGMSFGAFGGRA--------------D 303 (454)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTC-CCSEEEEE--GGGGTTSSCEEEEECH--------------H
T ss_pred hHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCC-CCcEEEec--cccCCCCcceeeeeHH--------------H
Confidence 9999999999999999999996 5221110 00110 26999888 98865434 8888877 4
Q ss_pred HHHhhccccCCCCC-CC--CcHHHHHHHHHHHHHHhcccccchhhcc
Q 018401 285 YEEKINQAVFPGLQ-GG--PHNHTITGLAVALKQVCTLITFSHIHVF 328 (356)
Q Consensus 285 ~~~~~~~~~~~~~~-gt--~~~~~~~al~~Al~~~~~~~~~~~~~~~ 328 (356)
+.+.+.....+..+ +| -|...++|..++|+.+.++...+++++.
T Consensus 304 i~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~ 350 (454)
T 4ao9_A 304 VMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAER 350 (454)
T ss_dssp HHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHH
Confidence 55555432211111 22 3456667777889998776444555443
No 229
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.31 E-value=4.8e-16 Score=150.52 Aligned_cols=241 Identities=14% Similarity=0.054 Sum_probs=143.0
Q ss_pred HcCCeeecCCCC-----CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchH
Q 018401 46 WKGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSP 120 (356)
Q Consensus 46 ~~~i~L~~~~~~-----~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~ 120 (356)
++.|++..+..+ .+|.|++++.+.+......++ ..+...+++++++++++ ..+.+.+++||++
T Consensus 100 ~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~-----------~~~~~~~Lae~L~~~~p-~~~~v~~~nSGse 167 (465)
T 2yky_A 100 HAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLST-----------QTENEALFAEAVCDRFP-SIDLVRFTNSGTE 167 (465)
Confidence 456787766553 379999999887765211111 12333456688888885 3456677999999
Q ss_pred HHHHHHHhh--cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEE
Q 018401 121 SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLI 196 (356)
Q Consensus 121 a~~~~l~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~--~~~k~v 196 (356)
++..++..+ ...+++|++.+..|.+....... +....|.....++++. .|+++|++++++ .++++|
T Consensus 168 A~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~s----g~~~~g~~~~~~~~~~------~d~~~l~~~l~~~~~~~aav 237 (465)
T 2yky_A 168 ANLMALATATAITGRKTVLAFDGGYHGGLLNFAS----GHAPTNAPYHVVLGVY------NDVEGTADLLKRHGHDCAAI 237 (465)
Confidence 999888765 34568999888666443221110 0001121111122222 378889888873 278888
Q ss_pred EEcC--CCCCCccc----HHHHHHHHHHcCCEEEEeccchhhhcccC--CCCCCCCCccEEEeCCCCcCCCC-CceEEEE
Q 018401 197 VAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG--VIPSPFEYADVVTTTTHKSLRGP-RGAMIFF 267 (356)
Q Consensus 197 ~l~~--~n~g~~~~----l~~I~~la~~~g~~vivD~a~~~g~~~~~--~~~~~l~~~D~~~~s~~K~l~gp-~gG~l~~ 267 (356)
++.+ +|+|.+.+ +++|.++|++||+++|+|++|+ +..... ....+. ..|++++ +|+++++ +.|+++.
T Consensus 238 i~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv-~pDi~t~--sK~lg~G~piG~v~~ 313 (465)
T 2yky_A 238 LVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGI-SADLTTL--GKYIGGGMSFGAFGG 313 (465)
Confidence 8873 34786665 9999999999999999999998 421100 001110 2677654 5998763 2388888
Q ss_pred ecCcchhccCCcchhhhHHHhhccc----cCCCCCCCCcHHHHHHHHHHHHHHhcccccchhh
Q 018401 268 RKGVKEINKQGKEVFYDYEEKINQA----VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 326 (356)
Q Consensus 268 ~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~ 326 (356)
+++ +.+.+... .......+.|....+|..++|+.+.++.-.++++
T Consensus 314 ~~~--------------i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~ 362 (465)
T 2yky_A 314 RRD--------------LMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLS 362 (465)
Confidence 773 44444330 0011112334556666678888886643334433
No 230
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.51 E-value=5.7e-14 Score=134.36 Aligned_cols=236 Identities=11% Similarity=0.015 Sum_probs=142.3
Q ss_pred CCchhhhcccccccChHHHHHHHHHHHHHHcCCeeecC-------CCCCcHHHHHHHHhhhhccCCCCCCCCccCCCchh
Q 018401 17 VTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPS-------ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 89 (356)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~-------~~~~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~ 89 (356)
.+.+..|++....-+..++.......+.....|||..+ ..++.|.|++|....+....... |.+..+
T Consensus 15 m~~~~~~~~v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~------Y~p~~G 88 (420)
T 4h51_A 15 MTTAERWQKIQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYE------YLPISG 88 (420)
T ss_dssp CCHHHHHHTCCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCC------CCCTTC
T ss_pred hhhhHHHhCCCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCC------CCCcCC
Confidence 34455565544444556677666544333357899765 23456889999877776533223 344466
Q ss_pred HHHHHHHHHHHHHHHcCC--CCCcc-cc-CCCchHHHHHHHH----hhcCCCCeeeecCCCCCcccCccccccccccccc
Q 018401 90 IDMAESLCQKRALEAFRL--DPEKW-GG-SLSGSPSNFQVYT----ALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 161 (356)
Q Consensus 90 ~~~l~~~~~~~la~~~g~--~~~~v-~v-~~sgs~a~~~~l~----al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 161 (356)
..++++++.+++ +|- +.+.+ .+ |.+||+++..++. .+++|||+|++++|.++.+ ...+...
T Consensus 89 ~p~lr~aia~~~---~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y--------~~i~~~a 157 (420)
T 4h51_A 89 YQPFIDEAVKII---YGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNH--------YGVVKAA 157 (420)
T ss_dssp CHHHHHHHHHHH---HC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHH--------HHHHHHT
T ss_pred hHHHHHHHHHHh---cCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhH--------HHHHHHc
Confidence 788887666554 333 22222 23 6777766554433 4467999999999655444 3345566
Q ss_pred ceeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCcc---cHHHHHHHHHHcCCEEEEeccchhhhc
Q 018401 162 SIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLV 234 (356)
Q Consensus 162 g~~~~~v~~~~~~~~~~~d~~~l~~~i~~--~~~k~v~l~-~~n-~g~~~---~l~~I~~la~~~g~~vivD~a~~~g~~ 234 (356)
|.+.+..+...+++++.+|.+.+.+.+.. .++++++++ ++| ||... .+++|.++|+++++++++|++.. +..
T Consensus 158 G~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~-~~~ 236 (420)
T 4h51_A 158 GWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQ-GYA 236 (420)
T ss_dssp TCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT-TTT
T ss_pred CCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhh-hhc
Confidence 76533232223334567899988887753 245666666 778 88555 47788899999999999999963 221
Q ss_pred ccCCCCCC--------CCCccEEEeCCCCcCC--CCCceEEEEecC
Q 018401 235 AAGVIPSP--------FEYADVVTTTTHKSLR--GPRGAMIFFRKG 270 (356)
Q Consensus 235 ~~~~~~~~--------l~~~D~~~~s~~K~l~--gp~gG~l~~~~~ 270 (356)
..+..... ...--+++.|++|.++ |-+-|++++..+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~ 282 (420)
T 4h51_A 237 SGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLK 282 (420)
T ss_dssp TSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECS
T ss_pred cCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEeccc
Confidence 11100000 0002377889999764 334498887664
No 231
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.48 E-value=3.3e-13 Score=131.35 Aligned_cols=236 Identities=13% Similarity=0.071 Sum_probs=133.8
Q ss_pred CcHHHHHHHHhhhhcc-CCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc------
Q 018401 58 TSVSVMQAVGSVMTNK-YSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------ 130 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------ 130 (356)
.+|.|.+++.+.+... +..+ . .++. ....++++++.+.++++++...+++.|++||++|+..++..+.
T Consensus 80 ~~p~v~~A~~~~~~~~~~~~~--~--~~~~-~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGseA~~~Aik~a~~~~~~~ 154 (472)
T 1ohv_A 80 SHPALVKLVQQPQNVSTFINR--P--ALGI-LPPENFVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRSK 154 (472)
T ss_dssp TCHHHHHHHHCGGGHHHHHCC--C--CTTT-SCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcccccc--c--cccc-ccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchhHHHHHHHHHHHHhhhh
Confidence 4899999999876421 1111 1 1111 1224566666676777776666677889999999998887663
Q ss_pred --C-----------------CC---CeeeecCCCCCcccCcccccccc-ccccccee---eEEEecccC--C--CC----
Q 018401 131 --K-----------------PH---DRIMALDLPHGGHLSHGYQTDTK-KISAVSIF---FETMPYRLN--E--ST---- 176 (356)
Q Consensus 131 --~-----------------~g---d~Vl~~~~~~~~~~~~~~~~~~~-~~~~~g~~---~~~v~~~~~--~--~~---- 176 (356)
. || ++|++.+..|++........... .....+.. +..++++.. + ..
T Consensus 155 ~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 234 (472)
T 1ohv_A 155 ERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKEN 234 (472)
T ss_dssp HHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHH
T ss_pred ccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccc
Confidence 1 46 89999886665543211100000 00000100 011222210 0 00
Q ss_pred ---CCCCHHHHHHHhhhc-----CCcEEEEcC--CCCCCccc----HHHHHHHHHHcCCEEEEeccch-hhhccc--CCC
Q 018401 177 ---GYIDYDQLEKSATLF-----RPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVI 239 (356)
Q Consensus 177 ---~~~d~~~l~~~i~~~-----~~k~v~l~~--~n~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~--~~~ 239 (356)
...|+++|++++++. ++++|++.+ +++|.+.+ +++|.++|++||+++|+|++|+ +|.... ...
T Consensus 235 ~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~ 314 (472)
T 1ohv_A 235 QQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHE 314 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGG
T ss_pred hhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhcc
Confidence 012688999988752 678888873 33787777 9999999999999999999997 343211 111
Q ss_pred CCCCC-CccEEEeCCCCcCCCCCceEEEEecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018401 240 PSPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 318 (356)
Q Consensus 240 ~~~l~-~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~ 318 (356)
..++. .+|++++| |++.| ||+++ ++ ++. .+..... ....+.+.+..++..++|+.+.+
T Consensus 315 ~~gv~~~~Di~t~s--K~~l~--GG~~~-~~--------------~~~-~~~~~~~-~~T~~~~~~~~aaa~aal~~~~~ 373 (472)
T 1ohv_A 315 HWGLDDPADVMTFS--KKMMT--GGFFH-KE--------------EFR-PNAPYRI-FNTWLGDPSKNLLLAEVINIIKR 373 (472)
T ss_dssp GGCCSSCCSEEEEC--GGGSS--EEEEE-CG--------------GGS-CSSSSSS-CCSSSSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCEEEEc--ccccc--CCccC-ch--------------hhc-ccccccc-cCccCccHHHHHHHHHHHHHHHh
Confidence 11111 17888777 98422 46665 44 221 1111100 11123466777777799998866
Q ss_pred c
Q 018401 319 L 319 (356)
Q Consensus 319 ~ 319 (356)
+
T Consensus 374 ~ 374 (472)
T 1ohv_A 374 E 374 (472)
T ss_dssp T
T ss_pred C
Confidence 4
No 232
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.45 E-value=9.8e-14 Score=131.71 Aligned_cols=222 Identities=11% Similarity=-0.003 Sum_probs=130.0
Q ss_pred cCCeeecCCCCC--cHHHHHHHHhhhhccCCCCCCCCccCCCchhH-----HHHHHHHHHHHHHHcCC--CC-CccccCC
Q 018401 47 KGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI-----DMAESLCQKRALEAFRL--DP-EKWGGSL 116 (356)
Q Consensus 47 ~~i~L~~~~~~~--~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~-----~~l~~~~~~~la~~~g~--~~-~~v~v~~ 116 (356)
+.|+|..+++.. ++.+.+++.+..... .......|+...+. .++++++.+++. ..|. ++ +++++|+
T Consensus 23 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~---~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i~~t~ 98 (391)
T 3bwn_A 23 FVVNLDHGDPTAYEEYWRKMGDRCTVTIR---GCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYIVVGT 98 (391)
T ss_dssp SCEECSSCCCGGGHHHHHHTGGGSCEEEC---TTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEEEEEE
T ss_pred CeeEcCCCCCCCCCCHHHHHhHHHHhhcC---ccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEeC
Confidence 467887666543 334555443322110 11112233444444 778877777665 3454 44 4777798
Q ss_pred CchHHHHHHHHhhcCCCC----eeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcC
Q 018401 117 SGSPSNFQVYTALLKPHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR 192 (356)
Q Consensus 117 sgs~a~~~~l~al~~~gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~ 192 (356)
|+++++..++.+++++|| +|++++++|.++.. .+...|.++..++ .+.+. ++ .+ +
T Consensus 99 G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~--------~~~~~g~~~~~~~--~d~~~--l~--------~~-~ 157 (391)
T 3bwn_A 99 GSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVE--------ETTYVRSGMYKWE--GDAWG--FD--------KK-G 157 (391)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHH--------HHHTTCBTTEEEE--EESTT--CC--------CC-S
T ss_pred ChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHH--------HHHHcCCeEEEec--CCHHH--cC--------CC-C
Confidence 999999989999999999 99999977765432 3445566665553 43221 21 13 7
Q ss_pred CcEEEEc-CCC-CCCcccHHHHHHHHHHcC--CEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCCCc---eEE
Q 018401 193 PKLIVAG-ASA-YARLYDYERIRKVCNKQK--AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG---AMI 265 (356)
Q Consensus 193 ~k~v~l~-~~n-~g~~~~l~~I~~la~~~g--~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp~g---G~l 265 (356)
+++|+++ ++| ||.+.+ +|++ ++++ +++|+|++|..+... .+.. ..+.++++.|+||++ |++| |++
T Consensus 158 ~k~v~l~~p~NPtG~~~~--~l~~--~~~~~~~~ii~De~y~~~~~~-~l~~--~~~~~i~~~S~SK~~-g~~GlRiG~~ 229 (391)
T 3bwn_A 158 PYIELVTSPNNPDGTIRE--TVVN--RPDDDEAKVIHDFAYYWPHYT-PITR--RQDHDIMLFTFSKIT-GHAGSRIGWA 229 (391)
T ss_dssp CEEEEEESSCTTTCCCCC--CCC-------CCCEEEEECTTCSTTTS-CCCC--CBCCSEEEEEHHHHH-SCGGGCEEEE
T ss_pred CEEEEECCCCCCCchhHH--HHHH--HhhcCCCEEEEeCCCCCCCCC-cccc--CCCCeEEEEechhhc-CCCccceEEE
Confidence 8999887 888 897775 4544 2255 999999999743211 1111 123689999999976 3344 998
Q ss_pred EE-ecCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018401 266 FF-RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 316 (356)
Q Consensus 266 ~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~ 316 (356)
++ ++ ++.+.+..... ....+++.+...++..+|+.-
T Consensus 230 ~~~~~--------------~l~~~l~~~~~-~~~~~~~~~~q~a~~~~l~~~ 266 (391)
T 3bwn_A 230 LVKDK--------------EVAKKMVEYII-VNSIGVSKESQVRTAKILNVL 266 (391)
T ss_dssp EECCH--------------HHHHHHHHHHH-HHHSSCCHHHHHHHHHHHHHH
T ss_pred EecCH--------------HHHHHHHHHhc-ccccCCCHHHHHHHHHHHhCc
Confidence 87 44 34443322110 012355666666666777653
No 233
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.37 E-value=1.3e-13 Score=132.55 Aligned_cols=193 Identities=8% Similarity=-0.127 Sum_probs=123.9
Q ss_pred cCCeeecCCCCC--cHHHHHHHHhhhhccCCC--CCCCCccCCCchhHHHHHHHHHHHHHHHcC--CCCCccccCCCchH
Q 018401 47 KGLELIPSENFT--SVSVMQAVGSVMTNKYSE--GYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGGSLSGSP 120 (356)
Q Consensus 47 ~~i~L~~~~~~~--~~~V~~a~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~v~v~~sgs~ 120 (356)
..|+|..+++.. ++.+++++.+.+...... +|+... .|.....++++++++++.+..+ ++++++++++|+++
T Consensus 57 ~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~--~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~ 134 (427)
T 2hox_A 57 CSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNP--VSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQ 134 (427)
T ss_dssp CCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSS--CCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHH
T ss_pred ceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCC--CCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHH
Confidence 457888777753 456777777766321111 133221 0111156788777777776555 46778888999999
Q ss_pred HHHHHHHhh--------cCCCCeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhhhcC
Q 018401 121 SNFQVYTAL--------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR 192 (356)
Q Consensus 121 a~~~~l~al--------~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~ 192 (356)
++..++.++ ++|||.|+++.+.|.++.. .+...|.+++. +.+|+++|++++++ +
T Consensus 135 al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~---------~~~d~~~l~~~~~~-~ 196 (427)
T 2hox_A 135 LIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFRE--------QTKYFDKKGYV---------WAGNAANYVNVSNP-E 196 (427)
T ss_dssp HHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHH--------HHHHSCBTTEE---------EEEEGGGGTTCSCG-G
T ss_pred HHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHH--------HHHHcCCeeee---------ecCCHHHHHHhhcC-C
Confidence 999899999 9999999999976644432 33344544421 23467777777766 7
Q ss_pred CcEEEEc-CCC-CCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeCCCCcCCCC--CceEEEEe
Q 018401 193 PKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP--RGAMIFFR 268 (356)
Q Consensus 193 ~k~v~l~-~~n-~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s~~K~l~gp--~gG~l~~~ 268 (356)
+++|+++ |+| +|.+.+ + +++ ++..+.|+++...... +.... .+.+++++|++|.++.| +.|+++++
T Consensus 197 ~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s--~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~~ 266 (427)
T 2hox_A 197 QYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHYT--PIKYK-ADEDILLFTMSKFTGHSGSRFGWALIK 266 (427)
T ss_dssp GEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTTS--CCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEEC
T ss_pred ceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCCC--ccccC-CCceEEEEeChhcCCCCCceEEEEEEC
Confidence 8998887 888 898888 4 233 5678889876421111 11111 23789999999976423 33999985
Q ss_pred c
Q 018401 269 K 269 (356)
Q Consensus 269 ~ 269 (356)
+
T Consensus 267 ~ 267 (427)
T 2hox_A 267 D 267 (427)
T ss_dssp C
T ss_pred C
Confidence 3
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.37 E-value=4.5e-11 Score=115.34 Aligned_cols=244 Identities=12% Similarity=0.038 Sum_probs=133.1
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCC-CCccccCCCchHHHHHHHHhh--cCCCC
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGGSLSGSPSNFQVYTAL--LKPHD 134 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~v~v~~sgs~a~~~~l~al--~~~gd 134 (356)
-+|+|.+++.+.+.... +. ..+...++ ...++.+.+.+++..+ .+.+.|++||++|+..+++.. .....
T Consensus 81 ~~p~v~~Ai~~q~~~~~-~~---~~~~~~~~----~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~ 152 (456)
T 4atq_A 81 SDPAVVAAVQEAAAHFT-HT---CFMVTPYE----GYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRD 152 (456)
T ss_dssp TCHHHHHHHHHHHHHCS-CC---TTTTSCCH----HHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHhhcc-Cc---ccCccCcH----HHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCC
Confidence 47999999998876521 11 11111112 2223557788887654 345666999999999888754 34557
Q ss_pred eeeecCCCCCcccCcccc------cccccccccceeeEEEeccc--CCCC-CCCCHHHHHHHh-------hhcCCcEEEE
Q 018401 135 RIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRL--NEST-GYIDYDQLEKSA-------TLFRPKLIVA 198 (356)
Q Consensus 135 ~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~--~~~~-~~~d~~~l~~~i-------~~~~~k~v~l 198 (356)
+|+.....|++....... .++.........+..+|++. .... ...+.+.+++.+ ...++.+|++
T Consensus 153 ~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAviv 232 (456)
T 4atq_A 153 AVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIII 232 (456)
T ss_dssp EEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEE
T ss_pred eEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEe
Confidence 788776555443210000 00100000011122233322 1111 122333333322 2235677777
Q ss_pred cCCC--CCCcc----cHHHHHHHHHHcCCEEEEeccchh-hhcccC--CCCCCCCCccEEEeCCCCcCCCCCc-eEEEEe
Q 018401 199 GASA--YARLY----DYERIRKVCNKQKAIMLADMAHIS-GLVAAG--VIPSPFEYADVVTTTTHKSLRGPRG-AMIFFR 268 (356)
Q Consensus 199 ~~~n--~g~~~----~l~~I~~la~~~g~~vivD~a~~~-g~~~~~--~~~~~l~~~D~~~~s~~K~l~gp~g-G~l~~~ 268 (356)
.|.. .|.+. -+++|.++|++||+++|+|++|+. |-.... ....++ ..|+++++ |.++|... |+++.+
T Consensus 233 EPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~g--K~lggg~P~~av~~~ 309 (456)
T 4atq_A 233 EPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGV-VPDIITMA--KGIAGGLPLSAITGR 309 (456)
T ss_dssp CSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTTSSCEEEEEE
T ss_pred ccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCC-CCchhhhh--hcccCcCCceeeEec
Confidence 6432 45443 399999999999999999999863 322110 111111 27999998 98865433 778887
Q ss_pred cCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhc
Q 018401 269 KGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHV 327 (356)
Q Consensus 269 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~ 327 (356)
+ ++.+.+.......+++. |..+.++..++|+.+.++.-.++.++
T Consensus 310 ~--------------~i~~~~~~~~~~~Tf~g-npla~aaala~L~~i~~~~l~~~~~~ 353 (456)
T 4atq_A 310 A--------------DLLDAVHPGGLGGTYGG-NPVACAAALAAIDTMEQHDLNGRARH 353 (456)
T ss_dssp H--------------HHHTTSCTTSSCCSSSS-CHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred H--------------HHHhcccccCCCCCCCC-ChHHHHhhHHHHHHHhhccHHHHHHH
Confidence 7 45555443322333333 45666667788999987644444443
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.14 E-value=8.2e-10 Score=106.95 Aligned_cols=245 Identities=13% Similarity=0.109 Sum_probs=131.3
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCccCCCchhHHHHHHHHHHHHHHHcCCCCCccccCCCchHHHHHHHHhhc-------
Q 018401 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGGSLSGSPSNFQVYTALL------- 130 (356)
Q Consensus 58 ~~~~V~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~v~v~~sgs~a~~~~l~al~------- 130 (356)
-+|+|.+++.+.+.... .+ + .+++ . ..+...++.+++.++...+.+.+.|++||++|+..+++...
T Consensus 84 ~~p~v~~Ai~~q~~~l~--~~-~-~~~~-~--~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g 156 (473)
T 4e3q_A 84 DHKGLIDAAKAQYERFP--GY-H-AFFG-R--MSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEG 156 (473)
T ss_dssp CCHHHHHHHHHHHHHCC--CC-C-CCTT-E--EEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcc--cc-c-cccc-c--cCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcC
Confidence 37999999998887521 11 1 1111 1 11222345688888887666677779999999998887542
Q ss_pred CCC-CeeeecCCCCCcccCcccc----ccc--ccccccceeeEEEecccC---CCCCCC-------CHHHHHHHhhh---
Q 018401 131 KPH-DRIMALDLPHGGHLSHGYQ----TDT--KKISAVSIFFETMPYRLN---ESTGYI-------DYDQLEKSATL--- 190 (356)
Q Consensus 131 ~~g-d~Vl~~~~~~~~~~~~~~~----~~~--~~~~~~g~~~~~v~~~~~---~~~~~~-------d~~~l~~~i~~--- 190 (356)
+++ .+|+.....|.+.-..... .++ ....+.+ ...++.+.. ...... ..+++++.+..
T Consensus 157 ~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~ 234 (473)
T 4e3q_A 157 KPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPG--FVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGA 234 (473)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTT--EEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCG
T ss_pred CCCcceEEEeeceECCCccccccccccccccccCCCCCc--ccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCC
Confidence 233 4567666554432110000 000 0111122 122222210 011111 12345555543
Q ss_pred cCCcEEEEcCCC--CCCcc----cHHHHHHHHHHcCCEEEEeccch-hhhcccCC--CCCCCCCccEEEeCCCCcCCCC-
Q 018401 191 FRPKLIVAGASA--YARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLRGP- 260 (356)
Q Consensus 191 ~~~k~v~l~~~n--~g~~~----~l~~I~~la~~~g~~vivD~a~~-~g~~~~~~--~~~~l~~~D~~~~s~~K~l~gp- 260 (356)
.++.+|++.|.. .|.+. -+++|.++|++||+++|+||+++ +|-..... ...++ ..|+++++ |.++|.
T Consensus 235 ~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi~t~~--K~l~gG~ 311 (473)
T 4e3q_A 235 DTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDF-TPDAIISS--KNLTAGF 311 (473)
T ss_dssp GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTC-CCSEEEEC--GGGGTTS
T ss_pred CceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCC-CCChHHhc--ccccCCC
Confidence 135667776433 45433 28999999999999999999985 22211100 00110 26999988 998653
Q ss_pred -CceEEEEecCcchhccCCcchhhhHHHhhccc------cCCCCCCCCcHHHHHHHHHHHHHHhcccccchhhcc
Q 018401 261 -RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA------VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVF 328 (356)
Q Consensus 261 -~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~gt~~~~~~~al~~Al~~~~~~~~~~~~~~~ 328 (356)
+-|++++++ ++.+.+... ...+...+-|..+.++..++|+.++++.-.++.++.
T Consensus 312 ~Pl~av~~~~--------------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~ 372 (473)
T 4e3q_A 312 FPMGAVILGP--------------ELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRL 372 (473)
T ss_dssp SCCEEEEECH--------------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHH
T ss_pred CCcccccccH--------------HHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHH
Confidence 347788877 344333211 111222233556677777889999876545555543
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.00 E-value=7.5e-09 Score=106.80 Aligned_cols=127 Identities=13% Similarity=0.004 Sum_probs=76.6
Q ss_pred HHHHHHhhh-------cCCcEEEEcCC--C-CCCccc----HHHHHHHHHHcCCEEEEeccch-hhhcccCC--CCCCCC
Q 018401 182 DQLEKSATL-------FRPKLIVAGAS--A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFE 244 (356)
Q Consensus 182 ~~l~~~i~~-------~~~k~v~l~~~--n-~g~~~~----l~~I~~la~~~g~~vivD~a~~-~g~~~~~~--~~~~l~ 244 (356)
+.|++.+.+ .++.+|++.|. + .|...+ +++|.++|++||+++|+|++|+ +|...... ...++
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv- 655 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC- 655 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-
Confidence 567777642 24567777653 4 454443 8999999999999999999985 33221110 00111
Q ss_pred CccEEEeCCCCcCCCC--CceEEEEecCcchhccCCcchhhhHHHhhcccc-----CCCCCCCCcHHHHHHHHHHHHHHh
Q 018401 245 YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV-----FPGLQGGPHNHTITGLAVALKQVC 317 (356)
Q Consensus 245 ~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~gt~~~~~~~al~~Al~~~~ 317 (356)
..|+++++ |.|+|. +-|++++++ ++.+.+.... ..+...+.|....++..++|+.+.
T Consensus 656 ~PDiitls--K~L~gG~~Plgav~~~~--------------~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~ 719 (831)
T 4a0g_A 656 KPDIACFA--KLLTGGMVPLAVTLATD--------------AVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFK 719 (831)
T ss_dssp CCSEEEEC--GGGGTTSSCCEEEEECH--------------HHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEe--cccccCccCcEEEEECH--------------HHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHH
Confidence 26898877 999663 338888877 4555543321 112223345667777778999997
Q ss_pred cccccchh
Q 018401 318 TLITFSHI 325 (356)
Q Consensus 318 ~~~~~~~~ 325 (356)
++...++.
T Consensus 720 ~~~l~~~~ 727 (831)
T 4a0g_A 720 DPETNHNI 727 (831)
T ss_dssp CTTTCTTB
T ss_pred hhHHHHHH
Confidence 65433343
No 237
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=44.04 E-value=30 Score=27.42 Aligned_cols=48 Identities=13% Similarity=-0.047 Sum_probs=35.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcC---CEEEE
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK---AIMLA 225 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g---~~viv 225 (356)
...++++.+++.+.++.+|.++..++.....+.++.+.+++.+ +.|++
T Consensus 55 ~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~v 105 (161)
T 2yxb_A 55 RQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVL 105 (161)
T ss_dssp BCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEE
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 3578888888877789999998666666667888888877754 44444
No 238
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=42.92 E-value=36 Score=30.89 Aligned_cols=46 Identities=7% Similarity=0.003 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcCCCCCcccc-CCC-------ch-HHHHHHHHhh---cCCCCeeeecC
Q 018401 95 SLCQKRALEAFRLDPEKWGG-SLS-------GS-PSNFQVYTAL---LKPHDRIMALD 140 (356)
Q Consensus 95 ~~~~~~la~~~g~~~~~v~v-~~s-------gs-~a~~~~l~al---~~~gd~Vl~~~ 140 (356)
+.+++.+.+.+|.+.+++.+ +.. .| ..+..++..+ +++||.+++.=
T Consensus 78 ~~m~~~L~~~~Gf~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a~pgD~llfYF 135 (350)
T 4f6o_A 78 HNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPNDSLFLHY 135 (350)
T ss_dssp HHHHHHHHHHSCCCGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred HHHHHHHHHhcCCCccceeeecccccccccCCCHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 35778888888987776655 542 23 4455566665 46899888543
No 239
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=41.98 E-value=15 Score=34.47 Aligned_cols=28 Identities=11% Similarity=0.230 Sum_probs=25.2
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+..|+..+++++++-||++|+-||+|.+
T Consensus 71 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 71 TRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3478888999999999999999999977
No 240
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=41.06 E-value=74 Score=26.49 Aligned_cols=44 Identities=5% Similarity=-0.001 Sum_probs=33.4
Q ss_pred HHHHHHHhhhcCCcEEEEc-CCCCCCcccHHHHHHHHHHcCCEEEEeccc
Q 018401 181 YDQLEKSATLFRPKLIVAG-ASAYARLYDYERIRKVCNKQKAIMLADMAH 229 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~-~~n~g~~~~l~~I~~la~~~g~~vivD~a~ 229 (356)
++++++.+.+.++..++++ |+. ..+++++.|.+.|+--|+..|.
T Consensus 137 ~~dL~~~v~~~~Id~vIIAvPs~-----~aq~v~d~lv~~GIk~I~nFap 181 (212)
T 3keo_A 137 ISTINDHLIDSDIETAILTVPST-----EAQEVADILVKAGIKGILSFSP 181 (212)
T ss_dssp GGGHHHHC-CCSCCEEEECSCGG-----GHHHHHHHHHHHTCCEEEECSS
T ss_pred HHHHHHHHHHcCCCEEEEecCch-----hHHHHHHHHHHcCCCEEEEcCC
Confidence 4567777877678899888 543 3578999999999999988774
No 241
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=37.78 E-value=73 Score=23.80 Aligned_cols=52 Identities=12% Similarity=0.057 Sum_probs=32.6
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEE-Eeccchhhh
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML-ADMAHISGL 233 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vi-vD~a~~~g~ 233 (356)
..+..+++...+.++|++. ++.....=...|..+|++++++++ ++.-.-.|.
T Consensus 25 ~~~v~kai~~gkakLViiA-~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~eLG~ 77 (121)
T 2lbw_A 25 VKEVVKALRKGEKGLVVIA-GDIWPADVISHIPVLCEDHSVPYIFIPSKQDLGA 77 (121)
T ss_dssp HHHHHHHHHHSCCCEEEEC-TTCSCTTHHHHHHHHHHHTCCCEEECCCHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEe-CCCCHHHHHHHHHHHHHhcCCcEEEECCHHHHHH
Confidence 4566777777678888885 222211125678899999999874 443333443
No 242
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=37.47 E-value=60 Score=26.66 Aligned_cols=51 Identities=8% Similarity=0.108 Sum_probs=37.9
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcC----CEEEEecc
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK----AIMLADMA 228 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g----~~vivD~a 228 (356)
.+..+++.+++.+.++++|.++..++.....+.++.+.+++.+ +.+++=++
T Consensus 125 ~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 125 DIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp SBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEEST
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECC
Confidence 4678888888877789999998666555666888887777754 67777544
No 243
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=36.87 E-value=71 Score=24.56 Aligned_cols=53 Identities=21% Similarity=0.296 Sum_probs=36.4
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcccHH-HHHH----HHHHcCC-EEEEeccc
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYE-RIRK----VCNKQKA-IMLADMAH 229 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~-~I~~----la~~~g~-~vivD~a~ 229 (356)
...+++.|.+.+.+.++..|+++ |-| .|...+.. .+.+ +.++.++ +..+||-.
T Consensus 38 ~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERl 98 (138)
T 1nu0_A 38 GTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERL 98 (138)
T ss_dssp TEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_pred cchHHHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCc
Confidence 35589999999988789999998 766 67665533 2222 3334565 57789864
No 244
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=36.78 E-value=54 Score=24.56 Aligned_cols=46 Identities=7% Similarity=0.174 Sum_probs=28.5
Q ss_pred CCHHHHHHHhhh--------cCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEE
Q 018401 179 IDYDQLEKSATL--------FRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 224 (356)
Q Consensus 179 ~d~~~l~~~i~~--------~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vi 224 (356)
.|++.+.+.+.+ .+-.-|++..+......++.+|.++++++|+.++
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLESPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECCSSCCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHhChHhhCCCcEEEEccccCChHHHHHHHHHHHHcCCEEE
Confidence 366666655532 1234556653332234689999999999998764
No 245
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=36.31 E-value=24 Score=32.59 Aligned_cols=28 Identities=14% Similarity=0.229 Sum_probs=24.4
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+..|...+++++++-||++|+-||+|.+
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3467788899999999999999999976
No 246
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=36.05 E-value=1.2e+02 Score=26.22 Aligned_cols=51 Identities=6% Similarity=0.179 Sum_probs=38.2
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCC---CcccHHHHHHHHHHcC----CEEEEecc
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYA---RLYDYERIRKVCNKQK----AIMLADMA 228 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g---~~~~l~~I~~la~~~g----~~vivD~a 228 (356)
.+..+++.+++.+.++++|.++...+. ....+.++.+.+++.| +.+++=++
T Consensus 166 ~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~ 223 (262)
T 1xrs_B 166 QVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGP 223 (262)
T ss_dssp SBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECT
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 467889888887778999999866655 5666778888887765 67776554
No 247
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=35.66 E-value=25 Score=32.81 Aligned_cols=26 Identities=8% Similarity=0.276 Sum_probs=23.2
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.|+..+++++++-||++|+-||+|.+
T Consensus 66 ~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 66 YGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 57777899999999999999999976
No 248
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=35.51 E-value=25 Score=33.24 Aligned_cols=27 Identities=7% Similarity=0.142 Sum_probs=24.7
Q ss_pred CCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 202 AYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 202 n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
..|+..+++++++-||++|+-||+|.+
T Consensus 74 ~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 74 KYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 478888999999999999999999976
No 249
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=35.02 E-value=81 Score=22.60 Aligned_cols=50 Identities=12% Similarity=-0.083 Sum_probs=32.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc----HHHHHH-HHHHcCCE-EEEecc
Q 018401 178 YIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD----YERIRK-VCNKQKAI-MLADMA 228 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~----l~~I~~-la~~~g~~-vivD~a 228 (356)
..+++.|.+.+.+.++..|++. |-| .|...+ ..+.++ +.++ ++. ..+||-
T Consensus 37 ~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~-~lpV~~~DER 94 (98)
T 1iv0_A 37 EEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRAR-GVEVELWDER 94 (98)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHT-TCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcC-CCCEEEECCC
Confidence 4568889998888789999998 766 564433 333333 3333 664 567874
No 250
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=34.83 E-value=26 Score=33.08 Aligned_cols=27 Identities=15% Similarity=0.160 Sum_probs=24.5
Q ss_pred CCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 202 AYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 202 n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
..|+..+++++++-||++|+-||+|.+
T Consensus 76 ~~Gt~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 76 KYGTKAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 368888999999999999999999976
No 251
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=34.64 E-value=26 Score=33.10 Aligned_cols=27 Identities=7% Similarity=0.094 Sum_probs=24.5
Q ss_pred CCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 202 AYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 202 n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
..|+..+++++++-||++|+-||+|.+
T Consensus 78 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 78 KYGTRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 368888999999999999999999976
No 252
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=34.63 E-value=56 Score=29.71 Aligned_cols=50 Identities=10% Similarity=0.044 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...+.+++++.+......+|.+.+...|-+....+|+++|+++|+.+++=
T Consensus 245 ~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 294 (379)
T 2rdx_A 245 CVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAE 294 (379)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 34578999999887568888888777888888999999999999876664
No 253
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=34.25 E-value=27 Score=33.42 Aligned_cols=28 Identities=14% Similarity=0.222 Sum_probs=25.2
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+..|...+++++++-||++|+-||+|.+
T Consensus 76 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 76 TKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3478889999999999999999999976
No 254
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=34.23 E-value=24 Score=33.05 Aligned_cols=27 Identities=7% Similarity=0.084 Sum_probs=24.5
Q ss_pred CCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 202 AYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 202 n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
..|+..+++++++-||++|+-||+|.+
T Consensus 60 ~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 60 RGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp TTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 368888999999999999999999976
No 255
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=33.63 E-value=74 Score=28.99 Aligned_cols=50 Identities=6% Similarity=-0.006 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...+.+++++.+......+|.+.++..|-+.+..+|+++|+++|+.+++=
T Consensus 253 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~ 302 (383)
T 3i4k_A 253 SVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGA 302 (383)
T ss_dssp TCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred ccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeC
Confidence 34578899888876567888888777888889999999999999988753
No 256
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=33.58 E-value=82 Score=22.44 Aligned_cols=43 Identities=12% Similarity=-0.036 Sum_probs=30.3
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
.++..+++.+.+.++|++.. +.+ ..-.++|..+|++++++++.
T Consensus 20 ~~~v~kai~~gka~lViiA~-D~~-~~~~~~i~~~c~~~~ip~~~ 62 (99)
T 3j21_Z 20 SNETIRLAKTGGAKLIIVAK-NAP-KEIKDDIYYYAKLSDIPVYE 62 (99)
T ss_dssp HHHHHHHHHHTCCSEEEEEC-CCC-HHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCccEEEEeC-CCC-HHHHHHHHHHHHHcCCCEEE
Confidence 56677788776888888852 222 33367888899999998643
No 257
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=33.42 E-value=48 Score=22.85 Aligned_cols=44 Identities=11% Similarity=-0.080 Sum_probs=30.1
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
..+..+++.+.+.++|++. ++... .-.+.|..+|++++++++.-
T Consensus 16 ~~~v~kai~~gkaklViiA-~D~~~-~~~~~i~~lc~~~~Ip~~~v 59 (82)
T 3v7e_A 16 TKQTVKALKRGSVKEVVVA-KDADP-ILTSSVVSLAEDQGISVSMV 59 (82)
T ss_dssp HHHHHHHHTTTCEEEEEEE-TTSCH-HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCeeEEEEe-CCCCH-HHHHHHHHHHHHcCCCEEEE
Confidence 4566777876577888875 22221 34678889999999977654
No 258
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=32.50 E-value=30 Score=32.22 Aligned_cols=28 Identities=11% Similarity=0.212 Sum_probs=24.9
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+..|...+++++++-||++|+-||+|.+
T Consensus 81 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 81 TRFGSKEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3368888999999999999999999976
No 259
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=32.42 E-value=1.1e+02 Score=22.99 Aligned_cols=48 Identities=8% Similarity=-0.056 Sum_probs=34.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
.++.++++..+.. ++.+|+++.-..+....-.++.+..+++|+-+-+-
T Consensus 48 ~l~~~~l~~ll~~-~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m 95 (122)
T 2ab1_A 48 GVQPADVKEVVEK-GVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVL 95 (122)
T ss_dssp CCCHHHHHHHHTT-CCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEE
T ss_pred HCCHHHHHHHhhC-CCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEe
Confidence 5788999988886 89999997333333324467788889999865554
No 260
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=32.34 E-value=29 Score=33.11 Aligned_cols=26 Identities=12% Similarity=0.356 Sum_probs=22.9
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+|+..+++++++-||++|+-||.|.+
T Consensus 76 ~Gt~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 76 YGTMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 46677899999999999999999976
No 261
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=32.32 E-value=63 Score=29.18 Aligned_cols=48 Identities=8% Similarity=0.142 Sum_probs=39.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
..+.+++++.+......+|.+-++..|-+.+..+++++|+++|+.+++
T Consensus 242 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 289 (368)
T 1sjd_A 242 IVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWC 289 (368)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEe
Confidence 457888888887656788888777788888899999999999998443
No 262
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=32.07 E-value=32 Score=33.01 Aligned_cols=28 Identities=11% Similarity=0.093 Sum_probs=25.2
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+..|...+++++++-||++|+-||+|.+
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4478888999999999999999999976
No 263
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=31.79 E-value=31 Score=32.49 Aligned_cols=28 Identities=11% Similarity=0.288 Sum_probs=25.0
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+..|+..+++++++-||++|+-||+|.+
T Consensus 92 p~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 92 ENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4478888999999999999999999976
No 264
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=31.48 E-value=67 Score=29.09 Aligned_cols=48 Identities=13% Similarity=0.035 Sum_probs=39.2
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
..+.+++++.+......+|.+-++..|-+.+..+|+++|+++|+.+++
T Consensus 248 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 295 (375)
T 1r0m_A 248 VASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWC 295 (375)
T ss_dssp CCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEe
Confidence 457888888887656788888777788888899999999999998433
No 265
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=31.04 E-value=1.8e+02 Score=23.82 Aligned_cols=92 Identities=7% Similarity=-0.064 Sum_probs=47.5
Q ss_pred ccccCCCchHHHHHHHHhhcCCC-CeeeecCCCCCcccCcccccccccccccceeeEEEecccCCCCCCCCHHHHHHHhh
Q 018401 111 KWGGSLSGSPSNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 189 (356)
Q Consensus 111 ~v~v~~sgs~a~~~~l~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~ 189 (356)
.+++|+++...=..+...+++.| -.|++..-.-... . . .....+..+..++ -|.+++++++.
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~----~-----~--~~~~~~~~~~~Dl------~d~~~~~~~~~ 87 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI----H-----K--PYPTNSQIIMGDV------LNHAALKQAMQ 87 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS----C-----S--SCCTTEEEEECCT------TCHHHHHHHHT
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh----c-----c--cccCCcEEEEecC------CCHHHHHHHhc
Confidence 45556644443344677788888 4665543111000 0 0 0111233342222 37888888886
Q ss_pred hcCCcEEEEcCCCCCCcccHHHHHHHHHHcCC
Q 018401 190 LFRPKLIVAGASAYARLYDYERIRKVCNKQKA 221 (356)
Q Consensus 190 ~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~ 221 (356)
...+|+.+..........+.+.+.+++.++
T Consensus 88 --~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~ 117 (236)
T 3qvo_A 88 --GQDIVYANLTGEDLDIQANSVIAAMKACDV 117 (236)
T ss_dssp --TCSEEEEECCSTTHHHHHHHHHHHHHHTTC
T ss_pred --CCCEEEEcCCCCchhHHHHHHHHHHHHcCC
Confidence 467777653222222335677788888764
No 266
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=31.04 E-value=1.1e+02 Score=22.01 Aligned_cols=43 Identities=12% Similarity=0.031 Sum_probs=30.5
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
.++..+++...+.++|++.. +.+ ..-.++|..+|.+++++++.
T Consensus 27 ~~~v~kai~~gkaklViiA~-D~~-~~~~~~i~~~c~~~~ip~~~ 69 (104)
T 4a18_G 27 YKSTIKAIRNGTAKLVFISN-NCP-TVRKSEIEYYASLAQISIHH 69 (104)
T ss_dssp HHHHHHHHHHTCCCEEEECT-TSC-HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCceEEEEeC-CCC-HHHHHHHHHHHHHcCCcEEE
Confidence 46677788776788888852 222 12367888899999999883
No 267
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=30.99 E-value=69 Score=29.04 Aligned_cols=50 Identities=8% Similarity=-0.038 Sum_probs=41.5
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...+.+++++.+......+|.+.++..|-+.+..+|+++|+++|+.+.+-
T Consensus 243 ~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~ 292 (368)
T 3q45_A 243 SCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVG 292 (368)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEec
Confidence 34678899998876567888888777888888999999999999988764
No 268
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=30.96 E-value=52 Score=29.80 Aligned_cols=50 Identities=4% Similarity=0.070 Sum_probs=40.7
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...+.+++++.+......+|.+.....|-+....+|+++|+++|+.++.=
T Consensus 250 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h 299 (371)
T 2ovl_A 250 NLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANNMLLTSH 299 (371)
T ss_dssp TCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHHHcCCeEccc
Confidence 34578999998887567787777766888888999999999999987773
No 269
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=30.93 E-value=27 Score=24.46 Aligned_cols=20 Identities=15% Similarity=0.164 Sum_probs=17.7
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 018401 209 YERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 209 l~~I~~la~~~g~~vivD~a 228 (356)
-++|.++|+++|++++.|-.
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 56899999999999999953
No 270
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=30.41 E-value=1.1e+02 Score=22.10 Aligned_cols=42 Identities=17% Similarity=0.149 Sum_probs=30.7
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEE
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 224 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vi 224 (356)
.++..+++...+.++|++. ++.+ ..-.++|..+|..++++++
T Consensus 27 ~~~v~kai~~gkaklVilA-~D~~-~~~~~~i~~~c~~~~ip~~ 68 (105)
T 3u5e_c 27 YKSTVKSLRQGKSKLIIIA-ANTP-VLRKSELEYYAMLSKTKVY 68 (105)
T ss_dssp HHHHHHHHHTTCCSEEEEC-TTSC-HHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHcCCceEEEEe-CCCC-HHHHHHHHHHHHHcCCCEE
Confidence 5667778877678888885 2222 2236788899999999998
No 271
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=30.29 E-value=83 Score=22.53 Aligned_cols=43 Identities=9% Similarity=0.133 Sum_probs=29.8
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
.++..+++...+.++|++.. +.+ ..-.+.|..+|++++++++.
T Consensus 23 ~~~v~kai~~gka~lViiA~-D~~-~~~~~~i~~~c~~~~ip~~~ 65 (101)
T 3on1_A 23 EEQVVKAVQNGQVTLVILSS-DAG-IHTKKKLLDKCGSYQIPVKV 65 (101)
T ss_dssp HHHHHHHHHTTCCSEEEEET-TSC-HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCCcEEEEeC-CCC-HHHHHHHHHHHHHcCCCEEE
Confidence 56777788776788888852 211 12366788899999997664
No 272
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=30.23 E-value=94 Score=22.19 Aligned_cols=43 Identities=14% Similarity=-0.045 Sum_probs=29.9
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
.++..+++.+.+.++|++.. +.+ ..-...|..+|++++++++.
T Consensus 21 ~~~v~kai~~gka~lViiA~-D~~-~~~~~~l~~~c~~~~vp~~~ 63 (101)
T 1w41_A 21 ARKSIQYAKMGGAKLIIVAR-NAR-PDIKEDIEYYARLSGIPVYE 63 (101)
T ss_dssp HHHHHHHHHHTCCSEEEEET-TSC-HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCCcEEEEeC-CCC-HHHHHHHHHHHHhcCCCEEE
Confidence 45677778776788888852 222 23366788899999998553
No 273
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=30.05 E-value=1e+02 Score=23.29 Aligned_cols=52 Identities=6% Similarity=0.090 Sum_probs=32.7
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEE-Eeccchhhh
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML-ADMAHISGL 233 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vi-vD~a~~~g~ 233 (356)
..+..+++.+.+.++|++.. +.....-...|..+|++++++++ ++.-.-.|.
T Consensus 29 ~~~v~Kai~~gka~LViiA~-D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~~LG~ 81 (126)
T 2xzm_U 29 LHEVLRTIEAKQALFVCVAE-DCDQGNYVKLVKALCAKNEIKYVSVPKRASLGE 81 (126)
T ss_dssp HHHHHHHHHHTCCSEEEEES-SCCSTTHHHHHHHHHHHTTCCEEEESCSHHHHH
T ss_pred HHHHHHHHHcCCceEEEEeC-CCChHHHHHHHHHHHHHhCCCEEEECCHHHHHH
Confidence 44566777766788888852 22112225778899999999765 454333443
No 274
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=30.02 E-value=61 Score=26.58 Aligned_cols=45 Identities=18% Similarity=0.187 Sum_probs=33.5
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEE--Eecc
Q 018401 180 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML--ADMA 228 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vi--vD~a 228 (356)
|.++|++++.. ....+++- +|.+..++++.+.++++|-.++ .|-.
T Consensus 18 ~~~~l~~al~s-~~~~ifll---~g~i~~l~~~v~~lk~~~K~v~Vh~Dli 64 (192)
T 3kts_A 18 NQKDMEKILEL-DLTYMVML---ETHVAQLKALVKYAQAGGKKVLLHADLV 64 (192)
T ss_dssp SSHHHHHHTTS-SCCEEEEC---SEETTTHHHHHHHHHHTTCEEEEEGGGE
T ss_pred CHHHHHHHHcC-CCCEEEEe---cCcHHHHHHHHHHHHHcCCeEEEecCch
Confidence 67889998876 67777774 3456789999999999986544 4444
No 275
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=29.86 E-value=91 Score=22.75 Aligned_cols=42 Identities=12% Similarity=-0.056 Sum_probs=29.0
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEE
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 224 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vi 224 (356)
..+..+++...+.++|++. ++. ...-...|..+|++++++++
T Consensus 26 ~~~v~kai~~gka~lViiA-~D~-~~~~~~~l~~~c~~~~Vp~~ 67 (110)
T 3cpq_A 26 SKRTIKFVKHGEGKLVVLA-GNI-PKDLEEDVKYYAKLSNIPVY 67 (110)
T ss_dssp HHHHHHHHHTTCCSEEEEC-TTC-BHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCceEEEEe-CCC-CHHHHHHHHHHHHHcCCCEE
Confidence 4567777876678888885 222 22336678889999998854
No 276
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=29.69 E-value=90 Score=22.37 Aligned_cols=44 Identities=18% Similarity=0.129 Sum_probs=30.2
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
.++..+++...+.++|++. ++.+ ..-..+|..+|+.++++++.-
T Consensus 24 ~~~v~kai~~gka~lViiA-~D~~-~~~~~~i~~~c~~~~vp~~~~ 67 (101)
T 3v7q_A 24 EDLVIKEIRNARAKLVLLT-EDAS-SNTAKKVTDKCNYYKVPYKKV 67 (101)
T ss_dssp HHHHHHHHHTTCCSEEEEE-TTSC-HHHHHHHHHHHHHTTCCEEEE
T ss_pred hhhhHHHHhcCceeEEEEe-cccc-ccchhhhcccccccCCCeeee
Confidence 5677788877678888885 2222 224667888899999876543
No 277
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=29.42 E-value=85 Score=28.37 Aligned_cols=49 Identities=6% Similarity=-0.075 Sum_probs=40.3
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
..+.+++++.+......+|.+.++..|-+.+..+|+++|+++|+.+.+=
T Consensus 248 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~ 296 (370)
T 1chr_A 248 LSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGG 296 (370)
T ss_dssp CCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 4578888888876457888887777888889999999999999988754
No 278
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=29.38 E-value=2.3e+02 Score=25.82 Aligned_cols=50 Identities=4% Similarity=-0.051 Sum_probs=40.7
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEec
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 227 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~ 227 (356)
...+..++.+.+......++.+.+.. |-+.+..+|+++|+++|+.+..-+
T Consensus 278 ~~~~~~~~~~~i~~~a~d~i~~k~~~-GGit~~~~ia~~A~~~gi~~~~~~ 327 (393)
T 3u9i_A 278 SVASATDAARLARNAAVDVLNIKLMK-CGIVEALDIAAIARTAGLHLMIGG 327 (393)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECHHH-HCHHHHHHHHHHHHHHTCEEEECC
T ss_pred cCCCHHHHHHHHHcCCCCEEEecccc-cCHHHHHHHHHHHHHcCCeEEecC
Confidence 35678889888876467888887666 878889999999999999988754
No 279
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=29.15 E-value=31 Score=32.63 Aligned_cols=26 Identities=15% Similarity=0.469 Sum_probs=23.3
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+|+..+++++++-||++|+-||+|.+
T Consensus 78 ~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 78 YGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 56777899999999999999999976
No 280
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=28.93 E-value=74 Score=29.39 Aligned_cols=49 Identities=8% Similarity=0.025 Sum_probs=39.9
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
...+.+++++.+......+|.+-++..|-+.+..+++++|+++|+.+++
T Consensus 309 ~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~ 357 (413)
T 1kko_A 309 WCNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQ 357 (413)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEe
Confidence 4567889998887645678877766678888899999999999998776
No 281
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=28.90 E-value=75 Score=29.55 Aligned_cols=48 Identities=8% Similarity=-0.043 Sum_probs=36.3
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
..+..++++.+...-..+|.+.++..|.+.+..+++++|+++|+.+++
T Consensus 320 ~~~~~~~~~~i~~~a~d~i~ik~~~~GGite~~~i~~~A~~~g~~~~~ 367 (431)
T 2fym_A 320 VTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVI 367 (431)
T ss_dssp TTCHHHHHHHHHTTCCSEEEECGGGTCSHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 456777777776544677777666678888888899999999987765
No 282
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=28.77 E-value=53 Score=25.07 Aligned_cols=49 Identities=12% Similarity=0.144 Sum_probs=33.2
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcC---CEEEEec
Q 018401 179 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK---AIMLADM 227 (356)
Q Consensus 179 ~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g---~~vivD~ 227 (356)
...+++.+++.+.++++|.++...+.....+.++.+..++.+ +.+++=+
T Consensus 41 ~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG 92 (137)
T 1ccw_A 41 SPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGG 92 (137)
T ss_dssp ECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEE
T ss_pred CCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 568888887776689999998655554445666776666653 5555543
No 283
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=28.67 E-value=78 Score=24.66 Aligned_cols=54 Identities=13% Similarity=0.082 Sum_probs=36.2
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccc-H---HHHH-HHHHHcCC-EEEEeccch
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD-Y---ERIR-KVCNKQKA-IMLADMAHI 230 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~-~~n-~g~~~~-l---~~I~-~la~~~g~-~vivD~a~~ 230 (356)
...+++.|.+.+.+.++..|++. |-| +|+..+ . +..+ .++++.++ ++.+||..+
T Consensus 40 ~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 40 GDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp TBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred hHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 34578999999988788999998 655 564433 2 2333 44455676 467898754
No 284
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=28.55 E-value=35 Score=32.19 Aligned_cols=28 Identities=7% Similarity=0.241 Sum_probs=24.9
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+..|+..+++++++-||++|+-||+|.+
T Consensus 92 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 92 SNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp TTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4478888999999999999999999976
No 285
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=28.01 E-value=83 Score=29.00 Aligned_cols=49 Identities=2% Similarity=-0.069 Sum_probs=40.2
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
...+.+++++.+......+|.+-++..|-+.+..+++++|+++|+.+++
T Consensus 309 ~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~~gi~~~~ 357 (413)
T 1kcz_A 309 WCNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKANGMGAYC 357 (413)
T ss_dssp TCCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHHTTCEEEE
T ss_pred CcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe
Confidence 3568899998887645778877776678788899999999999998877
No 286
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=28.00 E-value=86 Score=28.64 Aligned_cols=49 Identities=8% Similarity=0.114 Sum_probs=39.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
..+.+++++.+......+|.+-++..|-+.+..+|+++|+++|+.+++=
T Consensus 261 ~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~ 309 (393)
T 1wuf_A 261 IRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEILVWCG 309 (393)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHHcCCeEEec
Confidence 4578888888876456788887766888888999999999999987653
No 287
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=27.93 E-value=87 Score=25.89 Aligned_cols=34 Identities=6% Similarity=0.102 Sum_probs=27.7
Q ss_pred CCcEEEEcCC-C-CCCcccHHHHHHHHHHcCCEEEE
Q 018401 192 RPKLIVAGAS-A-YARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 192 ~~k~v~l~~~-n-~g~~~~l~~I~~la~~~g~~viv 225 (356)
.+..|++.-. | .|......++.++|++||+.++.
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 5777777633 5 79999999999999999987764
No 288
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=27.86 E-value=33 Score=32.26 Aligned_cols=26 Identities=8% Similarity=0.045 Sum_probs=22.8
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.|+..+++++++-||++|+-||+|.+
T Consensus 93 ~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 93 LGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp GTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 46777899999999999999999976
No 289
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=27.49 E-value=1.1e+02 Score=25.32 Aligned_cols=34 Identities=6% Similarity=0.190 Sum_probs=27.3
Q ss_pred CCcEEEEcC--CC-CCCcccHHHHHHHHHHcCCEEEE
Q 018401 192 RPKLIVAGA--SA-YARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 192 ~~k~v~l~~--~n-~g~~~~l~~I~~la~~~g~~viv 225 (356)
.+..|++.- -| .|......++.+++++||+.++.
T Consensus 158 ~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 158 QPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp CSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred CceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 566776654 55 68889999999999999988774
No 290
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=27.48 E-value=35 Score=31.69 Aligned_cols=26 Identities=12% Similarity=0.363 Sum_probs=22.2
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+|+..+++++++-||++|+-||.|.+
T Consensus 78 ~Gt~~d~~~lv~~ah~~Gi~vilD~V 103 (424)
T 2dh2_A 78 FGSKEDFDSLLQSAKKKSIRVILDLT 103 (424)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 56777888999999999999999976
No 291
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=27.08 E-value=41 Score=32.47 Aligned_cols=26 Identities=19% Similarity=0.464 Sum_probs=22.7
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+|+..+++++++-||++|+-||+|.+
T Consensus 76 ~Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 76 YGTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 46677899999999999999999976
No 292
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=26.24 E-value=50 Score=29.93 Aligned_cols=50 Identities=6% Similarity=-0.161 Sum_probs=40.4
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEec
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 227 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~ 227 (356)
..+|+..+.+++.. ....+-++|-|.|...-++++.+.|+++|+.+-+--
T Consensus 91 iHf~~~lal~a~e~-G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIGv 140 (366)
T 3noy_A 91 IHFAPSYAFLSMEK-GVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGV 140 (366)
T ss_dssp CCSCHHHHHHHHHT-TCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCHHHHHHHHHh-CCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEec
Confidence 35678777777765 577899999998877778999999999999988753
No 293
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=26.20 E-value=81 Score=24.10 Aligned_cols=44 Identities=7% Similarity=0.095 Sum_probs=28.6
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
..+..+++.+.+.++|++. ++.....-...|..+|+++|++++.
T Consensus 37 ~~~v~kai~~gkakLViiA-~D~~p~~~~~~l~~lc~~~~VP~~~ 80 (134)
T 2ale_A 37 ANEATKTLNRGISEFIIMA-ADCEPIEILLHLPLLCEDKNVPYVF 80 (134)
T ss_dssp HHHHHHHHHHTCEEEEEEE-TTCSSGGGGTHHHHHHHHHTCCEEE
T ss_pred chHHHHHHHhCCCeEEEEe-CCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 4566677776577888775 2222222256778899999998543
No 294
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=26.15 E-value=43 Score=32.69 Aligned_cols=26 Identities=19% Similarity=0.345 Sum_probs=22.9
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.|...+++++++-||++|+-||+|.+
T Consensus 195 ~Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 195 YGSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 45666799999999999999999987
No 295
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=25.76 E-value=38 Score=31.54 Aligned_cols=26 Identities=15% Similarity=0.377 Sum_probs=23.1
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.|...+++++++-||++|+-||+|.+
T Consensus 80 ~Gt~~~~~~lv~~~h~~Gi~vi~D~V 105 (449)
T 3dhu_A 80 YGTLADFKALTDRAHELGMKVMLDIV 105 (449)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 46677899999999999999999976
No 296
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=25.65 E-value=44 Score=33.19 Aligned_cols=28 Identities=18% Similarity=0.409 Sum_probs=25.0
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+.+|...+++++++-||++|+-||+|.+
T Consensus 106 p~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 106 PFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3478888999999999999999999977
No 297
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=25.40 E-value=36 Score=24.60 Aligned_cols=20 Identities=15% Similarity=0.187 Sum_probs=17.7
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 018401 209 YERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 209 l~~I~~la~~~g~~vivD~a 228 (356)
-++|.++|+++|++++.|-.
T Consensus 44 A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCeEEECHH
Confidence 56899999999999999954
No 298
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=25.35 E-value=1.1e+02 Score=23.96 Aligned_cols=46 Identities=7% Similarity=-0.037 Sum_probs=34.6
Q ss_pred HHHHHhhhcCCcEEEEcCC--C-CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 183 QLEKSATLFRPKLIVAGAS--A-YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 183 ~l~~~i~~~~~k~v~l~~~--n-~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
++.+.+.+.+..+|+..+. + -+...|...|.+.|-.|+++++.--+
T Consensus 73 ~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~la 121 (152)
T 1b93_A 73 QVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVA 121 (152)
T ss_dssp HHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSHH
T ss_pred hHHHHHHCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCHH
Confidence 4666777768888888754 3 22356888999999999999987644
No 299
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=25.27 E-value=45 Score=33.15 Aligned_cols=28 Identities=4% Similarity=0.237 Sum_probs=24.8
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+.+|...+++++++-||++|+-||+|.+
T Consensus 102 p~~Gt~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 102 EHFGNWTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3467888999999999999999999976
No 300
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=25.21 E-value=1e+02 Score=28.36 Aligned_cols=50 Identities=4% Similarity=0.019 Sum_probs=41.0
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...+.+++++.+......+|.+..+..|-+.+..+|+++|+++|+.+..=
T Consensus 273 ~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h 322 (410)
T 3dip_A 273 NLAGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAPH 322 (410)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEEC
T ss_pred CcCCHHHHHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHcCCEEeee
Confidence 34578899988876567888887777888888999999999999988653
No 301
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=25.21 E-value=30 Score=32.61 Aligned_cols=26 Identities=12% Similarity=0.257 Sum_probs=23.3
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.|...+++++++-||++|+-||+|.+
T Consensus 71 ~Gt~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 71 SGDESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp TEEHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 56777899999999999999999976
No 302
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=25.15 E-value=45 Score=33.13 Aligned_cols=28 Identities=18% Similarity=0.434 Sum_probs=25.0
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+.+|...+++++++-||++|+-||+|.+
T Consensus 110 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 110 PAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3468888999999999999999999976
No 303
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=24.97 E-value=58 Score=29.60 Aligned_cols=49 Identities=8% Similarity=-0.079 Sum_probs=40.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
..+.+++++.+......+|.+.++..|-+....+++++|+++|+.+++=
T Consensus 246 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~ 294 (378)
T 2qdd_A 246 LHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIE 294 (378)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred cCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 4578888888876567888887666788888999999999999987775
No 304
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=24.96 E-value=1.3e+02 Score=22.07 Aligned_cols=43 Identities=16% Similarity=0.085 Sum_probs=30.7
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
.++..+++...+.++|++. ++.+ ..-.++|..+|..+++.++.
T Consensus 31 ~~~t~kai~~gkakLVilA-~D~~-~~~~~~i~~~c~~~~ipv~~ 73 (112)
T 3iz5_f 31 YKTVLKTLRSSLGKLIILA-NNCP-PLRKSEIETYAMLAKISVHH 73 (112)
T ss_dssp HHHHHHHHHTTCCSEEEEC-SCCC-HHHHHHHHHHHHHTTCCEEC
T ss_pred HHHHHHHHHcCCceEEEEe-CCCC-HHHHHHHHHHHHHcCCcEEE
Confidence 4566777877678898885 2222 23467888899999998774
No 305
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=24.94 E-value=39 Score=24.19 Aligned_cols=20 Identities=20% Similarity=0.174 Sum_probs=17.6
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 018401 209 YERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 209 l~~I~~la~~~g~~vivD~a 228 (356)
-++|.++|+++|++++.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVK 48 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEECHH
Confidence 56899999999999999953
No 306
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=24.92 E-value=1.2e+02 Score=28.44 Aligned_cols=45 Identities=7% Similarity=-0.006 Sum_probs=26.4
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
++.+++.+...-...|.+-.+..|.+.+.-+++++|+++|..+++
T Consensus 334 ~~~i~~~Ie~~a~n~IlIKvnqiGGITEalkaa~lA~~~G~~vmv 378 (441)
T 3qtp_A 334 PARVQMAMDKNACNSVLIKVNQIGTLTETFKTIKMAQEKGWGVMA 378 (441)
T ss_dssp HHHHHHHHHHTCCSEEEECGGGTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCCCEEEecccccccHHHHHHHHHHHHHcCCeEEE
Confidence 444444444423344444444466666777777777777776554
No 307
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=24.76 E-value=47 Score=32.26 Aligned_cols=25 Identities=8% Similarity=0.185 Sum_probs=21.9
Q ss_pred CCcccHHHHHHHHHHcCCEEEEecc
Q 018401 204 ARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 204 g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
|...+++++++-||++|+-||.|.+
T Consensus 220 Gt~~df~~lv~~~H~~Gi~VilD~V 244 (588)
T 1j0h_A 220 GDKETLKTLIDRCHEKGIRVMLDAV 244 (588)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4566799999999999999999976
No 308
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=24.65 E-value=40 Score=32.63 Aligned_cols=26 Identities=15% Similarity=0.418 Sum_probs=22.4
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.|+..+++++++-||++|+-||+|.+
T Consensus 89 ~Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 89 YGTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45666799999999999999999976
No 309
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=24.42 E-value=49 Score=32.24 Aligned_cols=26 Identities=15% Similarity=0.169 Sum_probs=22.5
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+|+..+++++++-||++|+-||+|.+
T Consensus 84 ~Gt~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 84 YGTNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 45666789999999999999999977
No 310
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=24.42 E-value=33 Score=32.46 Aligned_cols=26 Identities=4% Similarity=0.098 Sum_probs=22.3
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.|+..+++++++-||++|+-||+|.+
T Consensus 99 ~Gt~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 99 LGGNEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp GTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 46667789999999999999999976
No 311
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=24.42 E-value=57 Score=29.55 Aligned_cols=50 Identities=14% Similarity=-0.071 Sum_probs=40.3
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...+.+++++.+......+|.+.++..|-+.+..+++++|+++|+.+++=
T Consensus 247 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 296 (371)
T 2ps2_A 247 LATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQ 296 (371)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEE
T ss_pred CcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEec
Confidence 34578899998887567888887666787888999999999999987763
No 312
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=24.29 E-value=88 Score=23.97 Aligned_cols=46 Identities=11% Similarity=0.078 Sum_probs=34.1
Q ss_pred HHHHHhhhcCCcEEEEcCC--C-CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 183 QLEKSATLFRPKLIVAGAS--A-YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 183 ~l~~~i~~~~~k~v~l~~~--n-~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
++.+.+.+.+..+|+..+. . -+...|...|.+.|-.|+++++..-+
T Consensus 65 ~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~la 113 (134)
T 2xw6_A 65 QMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNPM 113 (134)
T ss_dssp HHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECSHH
T ss_pred hHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcCHH
Confidence 4666777667888877644 3 22366899999999999999987644
No 313
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=24.28 E-value=78 Score=28.29 Aligned_cols=50 Identities=8% Similarity=0.022 Sum_probs=39.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEec
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 227 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~ 227 (356)
..+..++++.+......++.+.+...|-+.+..+|+++|+++|+.+++=+
T Consensus 223 ~~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 272 (342)
T 2okt_A 223 ATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVIGG 272 (342)
T ss_dssp CCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTTCEEEEBC
T ss_pred CCCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCCCEEEEcC
Confidence 45788888888764577877766667778888999999999999877653
No 314
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=24.26 E-value=41 Score=32.43 Aligned_cols=26 Identities=8% Similarity=0.388 Sum_probs=22.7
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.|+..+++++++-||++|+-||+|.+
T Consensus 75 ~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 75 FGTMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45667799999999999999999976
No 315
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=24.16 E-value=49 Score=32.89 Aligned_cols=28 Identities=11% Similarity=0.351 Sum_probs=25.0
Q ss_pred CCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 201 SAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 201 ~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+.+|...+++++++-||++|+-||+|.+
T Consensus 111 p~~Gt~~dfk~Lv~~aH~~GikVilD~V 138 (683)
T 3bmv_A 111 PYFGSFTDFQNLINTAHAHNIKVIIDFA 138 (683)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3468888999999999999999999977
No 316
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=24.16 E-value=39 Score=24.46 Aligned_cols=20 Identities=15% Similarity=0.194 Sum_probs=17.6
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 018401 209 YERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 209 l~~I~~la~~~g~~vivD~a 228 (356)
-++|.++|+++|++++.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIK 48 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCeecCHH
Confidence 56899999999999999953
No 317
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=24.14 E-value=87 Score=28.31 Aligned_cols=55 Identities=16% Similarity=0.142 Sum_probs=37.8
Q ss_pred CCHHHHHHHhh----hcCCcEEEE-----cCCCC-CCcccHHHHHHHHHHcCCEEEEeccchhhh
Q 018401 179 IDYDQLEKSAT----LFRPKLIVA-----GASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGL 233 (356)
Q Consensus 179 ~d~~~l~~~i~----~~~~k~v~l-----~~~n~-g~~~~l~~I~~la~~~g~~vivD~a~~~g~ 233 (356)
.++++++.++. ..+..++++ +.+++ ....++..|..+.+..+.+|++|..|+.|.
T Consensus 224 ~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G~ 288 (350)
T 1vr6_A 224 NTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGGR 288 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHCS
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCcc
Confidence 47787776653 224567766 12232 355578888888777799999999999773
No 318
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=24.10 E-value=1.1e+02 Score=27.60 Aligned_cols=29 Identities=14% Similarity=0.182 Sum_probs=21.3
Q ss_pred CcccHHHHHHHHHHcCCE--EEEeccchhhh
Q 018401 205 RLYDYERIRKVCNKQKAI--MLADMAHISGL 233 (356)
Q Consensus 205 ~~~~l~~I~~la~~~g~~--vivD~a~~~g~ 233 (356)
...++..+.+..++.+.. |++|++|+.+.
T Consensus 242 ~~~di~~~~~~l~~~~lp~~VivD~SH~ns~ 272 (350)
T 1n8f_A 242 SAKHVAEVKEGLNKAGLPAQVMIDFSHANSS 272 (350)
T ss_dssp SHHHHHHHHHHHHHTTCCCCEEEECSGGGTT
T ss_pred CHHHHHHHHHHHHHcCCCCeEEEECCCcccC
Confidence 344566666556777888 99999998653
No 319
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=23.78 E-value=50 Score=30.12 Aligned_cols=51 Identities=6% Similarity=0.010 Sum_probs=40.5
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEec
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 227 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~ 227 (356)
...+.+++++.+......+|.+.+...|-+....+++++|+++|+.+++=.
T Consensus 249 ~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 249 AAFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred CcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEeecc
Confidence 345789999988765678888876667888889999999999998766543
No 320
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=23.67 E-value=71 Score=29.20 Aligned_cols=51 Identities=8% Similarity=0.029 Sum_probs=40.5
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEec
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 227 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~ 227 (356)
...+.+++++.+......+|.+.+...|-+....+++++|+++|+.+++=+
T Consensus 253 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~ 303 (391)
T 2qgy_A 253 KQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEASNNGIFISPHC 303 (391)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHHTTCEECCBC
T ss_pred CcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHHHCCCEEeccC
Confidence 345788999988764577777766668888889999999999999876643
No 321
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=23.46 E-value=66 Score=29.06 Aligned_cols=49 Identities=4% Similarity=-0.025 Sum_probs=39.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
..+.+++++.+......+|.+.+...|-+.+..+++++|+++|+.+++=
T Consensus 246 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 294 (369)
T 2p8b_A 246 LKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVG 294 (369)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEec
Confidence 4578889988887567888887655787888999999999999987653
No 322
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=23.44 E-value=47 Score=32.48 Aligned_cols=26 Identities=12% Similarity=0.107 Sum_probs=23.3
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.|...+++++++-||++|+-||+|.+
T Consensus 205 ~Gt~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 205 YGTKGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 56777899999999999999999976
No 323
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=23.44 E-value=44 Score=32.24 Aligned_cols=26 Identities=8% Similarity=0.377 Sum_probs=22.3
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.|+..+++++++.||++|+-||+|.+
T Consensus 75 ~Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 75 FGTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45666789999999999999999976
No 324
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=23.43 E-value=65 Score=29.01 Aligned_cols=51 Identities=8% Similarity=0.050 Sum_probs=41.1
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEec
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 227 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~ 227 (356)
...+.+++++.+......+|.+.++..|-+.+..+|+++|+++|+.+.+-.
T Consensus 242 ~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 292 (354)
T 3jva_A 242 SCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGC 292 (354)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecC
Confidence 356788888888765678888876667778889999999999999987643
No 325
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=23.31 E-value=49 Score=32.13 Aligned_cols=25 Identities=12% Similarity=0.279 Sum_probs=21.8
Q ss_pred CCcccHHHHHHHHHHcCCEEEEecc
Q 018401 204 ARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 204 g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
|+..+++++++-||++|+-||.|.+
T Consensus 217 Gt~~dfk~lv~~~H~~Gi~VilD~V 241 (585)
T 1wzl_A 217 GDLPTFRRLVDEAHRRGIKIILDAV 241 (585)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4566799999999999999999976
No 326
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=22.90 E-value=37 Score=31.36 Aligned_cols=26 Identities=4% Similarity=0.139 Sum_probs=21.6
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.|...+++++++-||++|+-||+|.+
T Consensus 71 ~G~~~d~~~lv~~~h~~Gi~VilD~V 96 (422)
T 1ua7_A 71 LGTEQEFKEMCAAAEEYGIKVIVDAV 96 (422)
T ss_dssp TEEHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 57777888888888888888888876
No 327
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=22.88 E-value=1.5e+02 Score=23.95 Aligned_cols=46 Identities=7% Similarity=-0.048 Sum_probs=34.9
Q ss_pred HHHHHhhhcCCcEEEEcCC--C-CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 183 QLEKSATLFRPKLIVAGAS--A-YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 183 ~l~~~i~~~~~k~v~l~~~--n-~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
++.+.+.+.+..+|+..+. + -+...|...|.+.|-.|+++++.--+
T Consensus 89 qI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnla 137 (178)
T 1vmd_A 89 QIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITRS 137 (178)
T ss_dssp HHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSHH
T ss_pred hHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCHH
Confidence 4666777768888888744 3 22356899999999999999987644
No 328
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=22.88 E-value=2.1e+02 Score=23.90 Aligned_cols=67 Identities=18% Similarity=0.138 Sum_probs=42.6
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 180 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
+.+++++++.. ....|++..........++++.+.++++|+.+++|.. ..... ......+ +|++..+
T Consensus 90 ~~~~i~~~~~~-Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~-t~eea-~~a~~~G---ad~Ig~~ 156 (232)
T 3igs_A 90 FLDDVDALAQA-GAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCS-SVDDG-LACQRLG---ADIIGTT 156 (232)
T ss_dssp SHHHHHHHHHH-TCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECC-SHHHH-HHHHHTT---CSEEECT
T ss_pred cHHHHHHHHHc-CCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCC-CHHHH-HHHHhCC---CCEEEEc
Confidence 45677777665 7888877643322235688999999999999999853 32211 1112234 8888643
No 329
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=22.87 E-value=45 Score=32.86 Aligned_cols=49 Identities=6% Similarity=-0.023 Sum_probs=34.3
Q ss_pred CHHHHHHHh---hhcCCcEEEEcC-----CC--------------CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 180 DYDQLEKSA---TLFRPKLIVAGA-----SA--------------YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 180 d~~~l~~~i---~~~~~k~v~l~~-----~n--------------~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
|+..+.+.| ++-....|.++| ++ .|+..+++++++-||++|+-||.|.+
T Consensus 237 dl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 237 DLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEec
Confidence 566655543 333567777652 21 24566799999999999999999976
No 330
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=22.79 E-value=43 Score=32.20 Aligned_cols=25 Identities=8% Similarity=0.238 Sum_probs=21.3
Q ss_pred CCcccHHHHHHHHHHcCCEEEEecc
Q 018401 204 ARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 204 g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
|+..+++++++-||++|+-||+|.+
T Consensus 76 Gt~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 76 GNMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4566788999999999999999976
No 331
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=22.79 E-value=1.5e+02 Score=24.81 Aligned_cols=34 Identities=9% Similarity=0.165 Sum_probs=27.0
Q ss_pred CCcEEEEcCCC-CCCcccHHHHHHHHHHcCCEEEE
Q 018401 192 RPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 192 ~~k~v~l~~~n-~g~~~~l~~I~~la~~~g~~viv 225 (356)
.+..|++.-.+ .|......++.+++++||+.++.
T Consensus 167 ~Pa~vicEi~~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 167 KPAGVLCELTNDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp CSCEEEEEBBCTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred CceEEEEEEeCCCCCccCHHHHHHHHHHcCCCEEE
Confidence 56777765334 68888999999999999987764
No 332
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=22.65 E-value=54 Score=29.78 Aligned_cols=50 Identities=2% Similarity=-0.162 Sum_probs=40.2
Q ss_pred CCCC-HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYID-YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d-~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...+ .+++++.+......+|.+.++..|-+.+..+|+++|+++|+.+++=
T Consensus 259 ~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 259 SAAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp SCSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 3457 8899999877567888887666788888999999999999876664
No 333
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=22.44 E-value=2.2e+02 Score=23.76 Aligned_cols=67 Identities=15% Similarity=0.104 Sum_probs=42.5
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEeccchhhhcccCCCCCCCCCccEEEeC
Q 018401 180 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 252 (356)
Q Consensus 180 d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~l~~~D~~~~s 252 (356)
+.+++++++.. ....|++..+.......++++.+.++++|..+++|.. ..... ......+ +|++..+
T Consensus 90 ~~~~i~~~~~a-Gad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~-t~eea-~~a~~~G---ad~Ig~~ 156 (229)
T 3q58_A 90 YLQDVDALAQA-GADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCS-TVNEG-ISCHQKG---IEFIGTT 156 (229)
T ss_dssp SHHHHHHHHHH-TCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECS-SHHHH-HHHHHTT---CSEEECT
T ss_pred cHHHHHHHHHc-CCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecC-CHHHH-HHHHhCC---CCEEEec
Confidence 45677777665 7888877643322235788999999999999999853 32211 1111234 8888653
No 334
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=22.31 E-value=56 Score=32.10 Aligned_cols=26 Identities=8% Similarity=0.114 Sum_probs=22.6
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 203 YARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 203 ~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
.|+..+++++++-||++|+-||+|.+
T Consensus 159 ~Gt~~d~~~Lv~~ah~~GI~VilD~V 184 (628)
T 1g5a_A 159 LGTIGDLREVIAALHEAGISAVVDFI 184 (628)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 46667799999999999999999976
No 335
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=22.29 E-value=65 Score=29.11 Aligned_cols=50 Identities=4% Similarity=-0.084 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...+.+++++.+......+|.+.++..|-+....+++++|+++|+.+++=
T Consensus 247 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 296 (370)
T 1nu5_A 247 SLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGG 296 (370)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred CCCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHHHHHHHHHcCCcEEec
Confidence 34678899998876457888877656788888999999999999987653
No 336
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=22.02 E-value=69 Score=29.18 Aligned_cols=50 Identities=10% Similarity=0.018 Sum_probs=40.3
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...+.+++++.+......+|.+.....|-+.+..+|+++|+++|+.+.+=
T Consensus 245 ~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~~ 294 (378)
T 3eez_A 245 CLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVM 294 (378)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEcC
Confidence 35578889888876457888877666777888999999999999988753
No 337
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=21.75 E-value=1.1e+02 Score=25.38 Aligned_cols=51 Identities=10% Similarity=0.064 Sum_probs=36.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEE--cCCCCCCcccHHHHHHHHHHcC----CEEEEecc
Q 018401 178 YIDYDQLEKSATLFRPKLIVA--GASAYARLYDYERIRKVCNKQK----AIMLADMA 228 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l--~~~n~g~~~~l~~I~~la~~~g----~~vivD~a 228 (356)
.+..+++.+++.+.++++|.+ +...++....+.++.+.+++.+ +.+++=++
T Consensus 129 ~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG~ 185 (215)
T 3ezx_A 129 DVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGGA 185 (215)
T ss_dssp SCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEESS
T ss_pred CCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEECC
Confidence 467899988887778999999 6555555656888888777764 56666443
No 338
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=21.72 E-value=1.2e+02 Score=26.01 Aligned_cols=55 Identities=16% Similarity=0.089 Sum_probs=37.5
Q ss_pred CCHHHHHHHhh----hcCCcEEEEc-----CCCCC-CcccHHHHHHHHHHcCCEEEEeccchhhh
Q 018401 179 IDYDQLEKSAT----LFRPKLIVAG-----ASAYA-RLYDYERIRKVCNKQKAIMLADMAHISGL 233 (356)
Q Consensus 179 ~d~~~l~~~i~----~~~~k~v~l~-----~~n~g-~~~~l~~I~~la~~~g~~vivD~a~~~g~ 233 (356)
.+++++..++. ..+..++++. .+++. ...++..+..+.+..+.+||.|..|+.|.
T Consensus 141 ~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 141 NTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 47888877663 2234555553 23443 45577888888777799999999998764
No 339
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=21.62 E-value=59 Score=29.71 Aligned_cols=48 Identities=10% Similarity=0.011 Sum_probs=39.2
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
..+.+++++.+......+|.+.++..|-+.+..+|+++|+++|+.+++
T Consensus 259 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 306 (392)
T 2poz_A 259 VYTRFGFRKIFELQACGIIQPDIGTAGGLMETKKICAMAEAYNMRVAP 306 (392)
T ss_dssp CCHHHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHHHHHTTTCEECC
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEec
Confidence 456888888887645777777666688888999999999999998776
No 340
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=21.62 E-value=72 Score=29.24 Aligned_cols=50 Identities=8% Similarity=0.052 Sum_probs=39.7
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...+.+++++.+......+|.+.++..|-+....+++++|+++|+.++.=
T Consensus 255 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 255 AAHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp TCSSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred CcCCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 34578889988877567888887655787888889999999999987753
No 341
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=21.38 E-value=1.2e+02 Score=25.46 Aligned_cols=34 Identities=12% Similarity=0.170 Sum_probs=26.9
Q ss_pred CCcEEEEcCCC-CCCcccHHHHHHHHHHcCCEEEE
Q 018401 192 RPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 192 ~~k~v~l~~~n-~g~~~~l~~I~~la~~~g~~viv 225 (356)
.+..|++.--| .|.....+++.++|++||+.++.
T Consensus 178 ~Pa~VicEi~~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 178 VPITTICEMMGDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp CSEEEEEEEBCTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 56666665334 68999999999999999987764
No 342
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=21.17 E-value=1.9e+02 Score=25.76 Aligned_cols=37 Identities=11% Similarity=0.102 Sum_probs=27.6
Q ss_pred CCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEecc
Q 018401 192 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 192 ~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
+.++++++.-..+....+.++.+.++++|+.+++|..
T Consensus 186 ~~~~v~~~g~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 222 (352)
T 4e84_A 186 QHDVVLMSDYAKGGLTHVTTMIEKARAAGKAVLVDPK 222 (352)
T ss_dssp GCSEEEEECCSSSSCSSHHHHHHHHHHTTCEEEEECC
T ss_pred cCCEEEEeCCCCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 4788888622223344588999999999999999975
No 343
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=21.16 E-value=1.2e+02 Score=23.10 Aligned_cols=44 Identities=9% Similarity=0.089 Sum_probs=28.1
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
..+..+++.+.+.++|++. ++.....-+..|..+|++++++++.
T Consensus 46 ~~~v~kal~~gkaklViiA-~D~~~~~~~~~l~~lc~~~~IP~~~ 89 (135)
T 2aif_A 46 ANEATKALNRGIAEIVLLA-ADAEPLEILLHLPLVCEDKNTPYVF 89 (135)
T ss_dssp HHHHHHHHHTTCEEEEEEE-TTCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCCeEEEEe-cCCChHHHHhHHHHHHHhcCCcEEE
Confidence 4566777776567777774 2222111137888999999987653
No 344
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=21.09 E-value=47 Score=29.90 Aligned_cols=50 Identities=10% Similarity=0.130 Sum_probs=39.8
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 177 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 177 ~~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
...+.+++++.+......+|.+.+...|-+....+++++|+++|+.+++=
T Consensus 248 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~ 297 (359)
T 1mdl_A 248 NWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSH 297 (359)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHTTCCBCCB
T ss_pred CCCCHHHHHHHHHcCCCCEEeecchhhCCHHHHHHHHHHHHHcCCeEeec
Confidence 34578899988876557777777766888888999999999999876654
No 345
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=20.88 E-value=95 Score=28.97 Aligned_cols=48 Identities=8% Similarity=0.011 Sum_probs=28.1
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
..+.+++++.+...-..+|.+..+..|-+.+..+++++|+++|+.+++
T Consensus 332 ~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~v~~ 379 (444)
T 1w6t_A 332 VTNTDYLARGIQEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVV 379 (444)
T ss_dssp TTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHCCCeEEe
Confidence 335555555555433455555444456666666777777777776655
No 346
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=20.86 E-value=54 Score=31.82 Aligned_cols=25 Identities=12% Similarity=0.294 Sum_probs=21.5
Q ss_pred CCcccHHHHHHHHHHcCCEEEEecc
Q 018401 204 ARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 204 g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
|...+++++++-||++|+-||.|.+
T Consensus 216 Gt~~df~~lv~~~H~~Gi~VilD~V 240 (583)
T 1ea9_C 216 GDKDTLKKLVDLCHERGIRVLLDAV 240 (583)
T ss_dssp CCHHHHHHHHHHHTTTTCEEEEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4555788999999999999999976
No 347
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=20.85 E-value=52 Score=32.76 Aligned_cols=25 Identities=20% Similarity=0.464 Sum_probs=22.0
Q ss_pred CCcccHHHHHHHHHHcCCEEEEecc
Q 018401 204 ARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 204 g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
|+..+++++++-||++|+-||+|.+
T Consensus 309 Gt~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 309 GTMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEecc
Confidence 4566789999999999999999977
No 348
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=20.78 E-value=1.2e+02 Score=22.49 Aligned_cols=44 Identities=9% Similarity=0.077 Sum_probs=27.9
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 181 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 181 ~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
..+..+++...+.++|++...-.+ ..=...|..+|++++++++.
T Consensus 34 ~~~v~kai~~gka~lViiA~D~~p-~~~~~~l~~lc~~~~VP~~~ 77 (120)
T 1xbi_A 34 ANEVTKAVERGIAKLVIIAEDVKP-EEVVAHLPYLCEEKGIPYAY 77 (120)
T ss_dssp HHHHHHHHHHTCCSEEEEESCCSS-GGGTTTHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCceEEEEcCCCCh-HHHHHHHHHHHHhcCCCEEE
Confidence 456677777667888888521112 11145677889999987553
No 349
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=20.77 E-value=53 Score=32.39 Aligned_cols=25 Identities=12% Similarity=0.050 Sum_probs=21.3
Q ss_pred CCcccHHHHHHHHHHcCCEEEEecc
Q 018401 204 ARLYDYERIRKVCNKQKAIMLADMA 228 (356)
Q Consensus 204 g~~~~l~~I~~la~~~g~~vivD~a 228 (356)
|+..+++++++-||++|+-||+|.+
T Consensus 153 Gt~~df~~Lv~~aH~~GI~VilD~V 177 (644)
T 3czg_A 153 GSNDDLVALTSRLREAGISLCADFV 177 (644)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3455788999999999999999976
No 350
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=20.49 E-value=71 Score=29.23 Aligned_cols=49 Identities=8% Similarity=-0.048 Sum_probs=39.7
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
..+.+++++.+......+|.+..+..|-+.+..+|+++|+++|+.+..=
T Consensus 256 i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h 304 (389)
T 3ozy_A 256 LYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWNPH 304 (389)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECCC
T ss_pred CCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 4578888888876467777777777888888999999999999987754
No 351
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=20.28 E-value=92 Score=28.59 Aligned_cols=49 Identities=6% Similarity=-0.068 Sum_probs=39.9
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
..+.+++++.+......+|.+..+..|-+.+..+|+++|+++|+.+..=
T Consensus 270 ~~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~~~~h 318 (400)
T 4dxk_A 270 LGSRWAFRDLLETGAAGVVMLDISWCGGLSEARKIASMAEAWHLPVAPH 318 (400)
T ss_dssp CCHHHHHHHHHHTTCCCEEEECTTTTTHHHHHHHHHHHHHHTTCCEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 4577888888876567888887777887888999999999999988663
No 352
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=20.18 E-value=67 Score=28.96 Aligned_cols=48 Identities=10% Similarity=-0.033 Sum_probs=38.9
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
..+.+++++.+......+|.+.++..|-+....+++++|+++|+.+++
T Consensus 247 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 294 (366)
T 1tkk_A 247 VFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMV 294 (366)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHHHHHHHHHcCCcEEe
Confidence 457888988887656788887765578788889999999999987665
No 353
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=20.07 E-value=84 Score=28.60 Aligned_cols=49 Identities=8% Similarity=0.076 Sum_probs=38.9
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEe
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 226 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~vivD 226 (356)
..+.+++++.+......+|.+-++..|-+.+..+|+++|+++|+.+++=
T Consensus 261 ~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~ 309 (386)
T 1wue_A 261 IRSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQENDLLVWLG 309 (386)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHHHHHHHHHCCCeEEEC
Confidence 4578888888876457787776655787888899999999999987653
No 354
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=20.03 E-value=69 Score=28.92 Aligned_cols=48 Identities=6% Similarity=0.026 Sum_probs=37.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEE
Q 018401 178 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 225 (356)
Q Consensus 178 ~~d~~~l~~~i~~~~~k~v~l~~~n~g~~~~l~~I~~la~~~g~~viv 225 (356)
..+.+++++.+......+|.+-++..|-+.+..+|+++|+++|+.+++
T Consensus 241 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 288 (369)
T 2zc8_A 241 LTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWM 288 (369)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEe
Confidence 457888888887645788887665577788889999999999998433
Done!