BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018404
(356 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 523 bits (1347), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/352 (71%), Positives = 298/352 (84%), Gaps = 10/352 (2%)
Query: 5 SEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS 64
+E +SNKQVILKNYV G+PKE+DM +K +I LKV EGSN ++VKNLYLSCDPYMR+RM
Sbjct: 2 AEEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSNDVVVKNLYLSCDPYMRSRMR 61
Query: 65 FNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIH 124
+ SF PGSPI G+GVAKV++SG P+F+KGDLVWG TGWEEYS+I Q LFKIH
Sbjct: 62 KIEGSYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIH 121
Query: 125 HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV 184
DVPLSYYTGILGMPGMTA+AGF+E+C+PKKGE ++VSAASGAVGQLVGQFAK++GCYV
Sbjct: 122 DKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYV 181
Query: 185 VGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHV 244
VGSAGS+EK V+LLK+KFGFD+AFNYKEE DL AALKR FP+GIDIYFE+V
Sbjct: 182 VGSAGSKEK----------VDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENV 231
Query: 245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY 304
GGKMLDAVL+NM+L+GRIA CGMISQYNL Q EGVHNL ++ KRIRMEGF+VFDY+ Y
Sbjct: 232 GGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLY 291
Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
++L+ V+P I+ GKVVYVEDVA GLE+AP ALVGLFSGRN+GKQ+V+VSRE
Sbjct: 292 PKYLEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 510 bits (1314), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/353 (68%), Positives = 292/353 (82%), Gaps = 16/353 (4%)
Query: 9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
+NKQVILK+YV GFP E+D +++ L+V EG+N++LVKNLYLSCDPYMR RM D
Sbjct: 4 TNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMG-KPD 62
Query: 69 PDFSS----FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKN-PQGLFKI 123
P ++ +TPG PI+G+GV+++++SGHP++KKGDL+WG WEEYS+I FKI
Sbjct: 63 PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI 122
Query: 124 HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY 183
HTDVPLSYYTG+LGMPGMTA+AGFYE+C+PK+GE +YVSAASGAVGQLVGQ AK+MGCY
Sbjct: 123 QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCY 182
Query: 184 VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEH 243
VVGSAGS+EKV +LLK KFGFDDAFNYKEE+DL AALKRCFP GIDIYFE+
Sbjct: 183 VVGSAGSKEKV----------DLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFEN 232
Query: 244 VGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQ 303
VGGKMLDAVL+NM +HGRIA CGMISQYNL EGVHNL N++YKR R++GFVV D++ +
Sbjct: 233 VGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDK 292
Query: 304 YSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
YS+FL+ VLP+IREGK+ YVEDVADGLE AP ALVGLF G+NVGKQ+VVV+RE
Sbjct: 293 YSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 229 bits (585), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/349 (39%), Positives = 187/349 (53%), Gaps = 25/349 (7%)
Query: 10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDP 69
N+Q L G P + + E ILVKN YLS DP MR M+
Sbjct: 8 NRQYQLAQRPSGLPGRDTFSFVETPLG---EPAEGQILVKNEYLSLDPAMRGWMN----- 59
Query: 70 DFSSFTP----GSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHH 125
D S+ P G + GV KV+ S HP F+ GD V G G ++Y I P+G +K+
Sbjct: 60 DARSYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGALGVQDY-FIGEPKGFYKVDP 118
Query: 126 TDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVV 185
+ PL Y LGM GMTA+ ++ PK GE + +S A+GAVG + GQ A+L GC VV
Sbjct: 119 SRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVV 178
Query: 186 GSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG 245
G AG EK L + GFD A +YK E DL A LKR P+GID++F++VG
Sbjct: 179 GIAGGAEK----------CRFLVEELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVG 227
Query: 246 GKMLDAVLLNMRLHGRIAACGMISQYNLSQP-EGVHNLMNVVYKRIRMEGFVVFDYFPQY 304
G++LD VL + RI CG ISQYN + G N ++++ R RMEG VV DY ++
Sbjct: 228 GEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRF 287
Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
L + ++ EGK+ ED+ +GLE P L+ LFSG N GK ++ V
Sbjct: 288 PEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV 336
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 199/348 (57%), Gaps = 30/348 (8%)
Query: 11 KQVILKNYVEGFPKETDMLVKASSIS-LKVEEGSNAILVKNLYLSCDPYMRARMSFNQDP 69
K LK + +G P ++D +K + LK E +L++ L+LS DPYMR
Sbjct: 9 KSWTLKKHFQGKPTQSDFELKTVELPPLKNGE----VLLEALFLSVDPYMRIASK----- 59
Query: 70 DFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHT--- 126
G+ + G VA+VV+S + F G +V +GW + I + +GL K+
Sbjct: 60 ---RLKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTH-FISDGKGLEKLLTEWPD 115
Query: 127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
+PLS G +GMPG+TA+ G E+C K GE + VSAA+GAVG +VGQ AKL GC VVG
Sbjct: 116 KLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVG 175
Query: 187 SAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
+AGS EK+ + + GFD AFNYK N L+ ALK+ P+G D YF++VGG
Sbjct: 176 AAGSDEKIAYL-----------KQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 224
Query: 247 KMLDAVLLNMRLHGRIAACGMISQYN-LSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY- 304
+ L+ VL M+ G+IA CG IS YN + Q + +++YK++R+EGF+V+ +
Sbjct: 225 EFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVR 284
Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV 352
+ L ++ ++ EGK+ Y E V G EN PAA + + +G N+GK +V
Sbjct: 285 EKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVT 332
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 189/347 (54%), Gaps = 28/347 (8%)
Query: 10 NKQVILKNYVEGFPKETDMLVKASSIS-LKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
K LK + G+P +D +K S + LK E +L++ L+L+ DPYMR
Sbjct: 24 TKTWTLKKHFVGYPTNSDFELKTSELPPLKNGE----VLLEALFLTVDPYMRVAAK---- 75
Query: 69 PDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLI--KNPQGLFKIHHT 126
G + G VAKVV+S + KG +V + GW +S+ K+ + L
Sbjct: 76 ----RLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPD 131
Query: 127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
+PLS G +GMPG+TA+ G EIC K GE + V+AA+GAVG +VGQ AKL GC VVG
Sbjct: 132 TIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVG 191
Query: 187 SAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
+ GS EKV + K GFD FNYK L+ LK+ P+G D YF++VGG
Sbjct: 192 AVGSDEKVAYL-----------QKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGG 240
Query: 247 KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMN-VVYKRIRMEGFVVFDYF-PQY 304
+ + V+ M+ GRIA CG IS YN + P V+Y+ +RME FVV+ +
Sbjct: 241 EFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDAR 300
Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV 351
+ L +L ++ EGK+ Y E + +G EN PAA +G+ G N+GK +V
Sbjct: 301 QKALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 347
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 189/347 (54%), Gaps = 28/347 (8%)
Query: 10 NKQVILKNYVEGFPKETDMLVKASSIS-LKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
K LK + G+P +D +K S + LK + +L++ L+L+ DPYMR
Sbjct: 3 TKTWTLKKHFVGYPTNSDFELKTSELPPLK----NGEVLLEALFLTVDPYMRVAAK---- 54
Query: 69 PDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLI--KNPQGLFKIHHT 126
G + G VAKVV+S + KG +V + GW +S+ K+ + L
Sbjct: 55 ----RLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPD 110
Query: 127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
+PLS G +GMPG+TA+ G EIC K GE + V+AA+GAVG +VGQ AKL GC VVG
Sbjct: 111 TIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVG 170
Query: 187 SAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
+ GS EKV + K GFD FNYK L+ LK+ P+G D YF++VGG
Sbjct: 171 AVGSDEKVAYL-----------QKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGG 219
Query: 247 KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMN-VVYKRIRMEGFVVFDYF-PQY 304
+ + V+ M+ GRIA CG IS YN + P V+Y+ +RME FVV+ +
Sbjct: 220 EFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDAR 279
Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV 351
+ L +L ++ EGK+ Y E + +G EN PAA +G+ G N+GK +V
Sbjct: 280 QKALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 326
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 165/328 (50%), Gaps = 35/328 (10%)
Query: 46 ILVKNLYLSCDPYMRARMSFNQDPDFSSFTP---GSPIEGFGVAKVVDSGHPEFKKGDLV 102
+ V+ LYLS DPYMR RM N+D TP ++G G+ + +S H KGD V
Sbjct: 45 VQVRTLYLSVDPYMRCRM--NEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFV 102
Query: 103 WGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKG--E 158
+ +I + L K+ D LSY+ G +GMPG+T+ G E G +
Sbjct: 103 TSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNK 162
Query: 159 YIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF 217
+ VS A+GA G + GQ +GC VVG G+ EK L L ++ GFD A
Sbjct: 163 TMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCIL----------LTSELGFDAAI 212
Query: 218 NYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP- 276
NYK++N + + C P G+D+YF++VGG + D V+ M + I CG ISQYN P
Sbjct: 213 NYKKDNVAEQLRESC-PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPY 271
Query: 277 --------EGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVAD 328
E + N+ +R F+V +Y ++ + + + +EGK+ E V +
Sbjct: 272 PPPLSPAIEAIQKERNITRER-----FLVLNYKDKFEPGILQLSQWFKEGKLKIKETVIN 326
Query: 329 GLENAPAALVGLFSGRNVGKQLVVVSRE 356
GLEN AA + +G N+GKQ+V +S E
Sbjct: 327 GLENMGAAFQSMMTGGNIGKQIVCISEE 354
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 165/328 (50%), Gaps = 35/328 (10%)
Query: 46 ILVKNLYLSCDPYMRARMSFNQDPDFSSFTP---GSPIEGFGVAKVVDSGHPEFKKGDLV 102
+ V+ LYLS DPYMR RM N+D TP ++G G+ + +S H KGD V
Sbjct: 40 VQVRTLYLSVDPYMRCRM--NEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFV 97
Query: 103 WGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKG--E 158
+ +I + L K+ D LSY+ G +GMPG+T+ G E G +
Sbjct: 98 TSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNK 157
Query: 159 YIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF 217
+ VS A+GA G + GQ +GC VVG G+ EK L L ++ GFD A
Sbjct: 158 TMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCIL----------LTSELGFDAAI 207
Query: 218 NYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP- 276
NYK++N + + C P G+D+YF++VGG + D V+ M + I CG ISQYN P
Sbjct: 208 NYKKDNVAEQLRESC-PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPY 266
Query: 277 --------EGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVAD 328
E + N+ +R F+V +Y ++ + + + +EGK+ E V +
Sbjct: 267 PPPLSPAIEAIQKERNITRER-----FLVLNYKDKFEPGILQLSQWFKEGKLKIKETVIN 321
Query: 329 GLENAPAALVGLFSGRNVGKQLVVVSRE 356
GLEN AA + +G N+GKQ+V +S E
Sbjct: 322 GLENMGAAFQSMMTGGNIGKQIVCISEE 349
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 167/330 (50%), Gaps = 39/330 (11%)
Query: 46 ILVKNLYLSCDPYMRARMSFNQDPDF-SSFTPGSPIEGFGVAKVVDSGHPEFKKGDLV-- 102
+ V+ LYLS DPYMR +M+ + D+ + + +G G+ V +S H + KGD V
Sbjct: 41 VQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTS 100
Query: 103 --WGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKG- 157
W W+ +++ + GL K+ D LSY+ G +GMPG+T+ G E G
Sbjct: 101 FYWP---WQTKAIL-DGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGS 156
Query: 158 -EYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD 215
+ + VS A+GA G L GQ L+GC VVG G++EK L ++ GFD
Sbjct: 157 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLF----------LTSELGFDA 206
Query: 216 AFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYN--- 272
A NYK N + L+ P G+D+YF++VGG + +AV+ M + I CG ISQY+
Sbjct: 207 AVNYKTGN-VAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDV 265
Query: 273 ------LSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDV 326
E + N+ +R F V +Y ++ + + + +EGK+ E +
Sbjct: 266 PYPPPLPPAVEAIRKERNITRER-----FTVLNYKDKFEPGILQLSQWFKEGKLKVKETM 320
Query: 327 ADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
A GLEN A + +G NVGKQ+V +S +
Sbjct: 321 AKGLENMGVAFQSMMTGGNVGKQIVCISED 350
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 170/355 (47%), Gaps = 41/355 (11%)
Query: 21 GFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDF-SSFTPGSP 79
G P + V+ S+ + EG + V+ LYLS DPY R + + + D+ + +
Sbjct: 28 GNPVAENFRVEEFSLLDALNEGQ--VQVRTLYLSVDPYXRCKXNEDTGTDYLAPWQLAQV 85
Query: 80 IEGFGVAKVVDSGHPEFKKGDLV----WGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYY 133
+G G+ V +S H + KGD V W W+ +++ + GL K+ D LSY+
Sbjct: 86 ADGGGIGIVEESKHQKLAKGDFVTSFYWP---WQTKAIL-DGNGLEKVDPQLVDGHLSYF 141
Query: 134 TGILGMPGMTAWAGFYEICAPKKG--EYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGS 190
G +G PG+T+ G E G + VS A+GA G L GQ L+GC VVG G+
Sbjct: 142 LGAIGXPGLTSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVGICGT 201
Query: 191 REKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLD 250
+EK L ++ GFD A NYK N + L+ P G+D+YF++VGG + +
Sbjct: 202 QEKCLF----------LTSELGFDAAVNYKTGN-VAEQLREACPGGVDVYFDNVGGDISN 250
Query: 251 AVLLNMRLHGRIAACGMISQYN---------LSQPEGVHNLMNVVYKRIRMEGFVVFDYF 301
V+ + I CG ISQYN E + N+ +R F V +Y
Sbjct: 251 TVISQXNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRER-----FTVLNYK 305
Query: 302 PQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
++ + + + +EGK+ E VA GLEN A +G NVGKQ+V +S +
Sbjct: 306 DKFEPGILQLSQWFKEGKLKVKETVAKGLENXGVAFQSXXTGGNVGKQIVCISED 360
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQ 200
G TA+ E+ +G+ + V+AA+G GQ Q +K C+V+G+ S EK +
Sbjct: 127 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL--- 183
Query: 201 SQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHG 260
G D NYK E + LK+ +PEG+D+ +E VGG M D + + G
Sbjct: 184 --------KSLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKG 234
Query: 261 RIAACGMISQYNLSQPEGVHNL------MNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY 314
R+ G IS Y P G+ + ++ K ++GF + Y +Y + +L
Sbjct: 235 RLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEM 292
Query: 315 IREGKVVYVEDVAD--------GLENAPAALVGLFSGRNVGKQLV 351
G +V D+ D GLE+ A+ ++ G+N GK +V
Sbjct: 293 CVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 337
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQ 200
G TA+ E+ +G+ + V+AA+G GQ Q +K C+V+G+ S EK +
Sbjct: 148 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL--- 204
Query: 201 SQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHG 260
G D NYK E + LK+ +PEG+D+ +E VGG M D + + G
Sbjct: 205 --------KSLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKG 255
Query: 261 RIAACGMISQYNLSQPEGVHNL------MNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY 314
R+ G IS Y P G+ + ++ K ++GF + Y +Y + +L
Sbjct: 256 RLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEM 313
Query: 315 IREGKVVYVEDVAD--------GLENAPAALVGLFSGRNVGKQLV 351
G +V D+ D GLE+ A+ ++ G+N GK +V
Sbjct: 314 CVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 358
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQ 200
G TA+ E+ +G+ + V+AA+G GQ Q +K C+V+G+ S EK +
Sbjct: 156 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL--- 212
Query: 201 SQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHG 260
G D NYK E + LK+ +PEG+D+ +E VGG M D + + G
Sbjct: 213 --------KSLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKG 263
Query: 261 RIAACGMISQYNLSQPEGVHNL------MNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY 314
R+ G IS Y P G+ + ++ K ++GF + Y +Y + +L
Sbjct: 264 RLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEM 321
Query: 315 IREGKVVYVEDVAD--------GLENAPAALVGLFSGRNVGKQLV 351
G +V D+ D GLE+ A+ ++ G+N GK +V
Sbjct: 322 CVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 366
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 133/307 (43%), Gaps = 46/307 (14%)
Query: 44 NAILVKNLYLSCDP---YMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGD 100
+ +L+K +P Y+R+ ++++ P +TPGS + G V + V FKKGD
Sbjct: 58 HQVLIKVHACGVNPVETYIRSG-TYSRKP-LLPYTPGSDVAG--VIEAVGDNASAFKKGD 113
Query: 101 LVWGTT----GWEEYSLIKNPQGLFKIHHTDVPLSYYTGI-LGMPGMTAWAGFYEICAPK 155
V+ ++ G+ EY+L + ++ L + G +G+P TA+ K
Sbjct: 114 RVFTSSTISGGYAEYALAAD----HTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVK 169
Query: 156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD 215
GE + V ASG VG Q A+ G ++G+AG+ E ++ L+N G +
Sbjct: 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV---------LQN--GAHE 218
Query: 216 AFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQ 275
FN++E N +D K +GIDI E + L L + GR+ G +
Sbjct: 219 VFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTIEI-- 276
Query: 276 PEGVHNLMNVVYKRIRMEGFVVF----DYFPQYSRFLDAVL------PYIREGKVVYVED 325
N + + K + G +F + F QY+ L A + P I G +E
Sbjct: 277 -----NPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVI--GSQYPLEK 329
Query: 326 VADGLEN 332
VA+ EN
Sbjct: 330 VAEAHEN 336
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 110/257 (42%), Gaps = 23/257 (8%)
Query: 46 ILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLV--W 103
+L+KN Y + Y+ + P + G G VAK G F+ GD V
Sbjct: 38 LLIKNKYTGVN-YIESYFRKGIYPCEKPYVLGREASGTVVAK--GKGVTNFEVGDQVAYI 94
Query: 104 GTTGWEEYSLIKNPQGLFKIHH--TDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIY 161
+ + +YS I + + K+ +D L Y L + +TA + E KKG+Y+
Sbjct: 95 SNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGL-LQVLTALSFTNEAYHVKKGDYVL 153
Query: 162 VSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE 221
+ AA+G VG ++ Q K+ G + + A + EK+ + ++G + N +
Sbjct: 154 LFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-----------IAKEYGAEYLINASK 202
Query: 222 ENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHN 281
E+ L LK +G+D F+ VG + L ++ G + G S L P +
Sbjct: 203 EDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNAS--GLIPPFSITR 260
Query: 282 L--MNVVYKRIRMEGFV 296
L N+ R ++ G++
Sbjct: 261 LSPKNITLVRPQLYGYI 277
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 30/211 (14%)
Query: 110 EYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAV 169
E +L P+ L +PL++ +TAW + + G+ + V AA V
Sbjct: 129 EANLAPKPKNLSFEEAAAIPLTF---------LTAWQMVVDKLGVRPGDDVLVMAAGSGV 179
Query: 170 GQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL 229
Q AKL G V+ +AGS +K+ G D+ NY +
Sbjct: 180 SVAAIQIAKLFGARVIATAGSEDKLR-----------RAKALGADETVNYTHPDWPKEVR 228
Query: 230 KRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKR 289
+ +G D +H G + V+ GRIA G S Y EG +V Y++
Sbjct: 229 RLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQ 283
Query: 290 IRMEGFVVFDYFPQYSRFLDAVLPYIREGKV 320
+ + G SR +L ++ EGK+
Sbjct: 284 LSILG----STMASKSRLFP-ILRFVEEGKL 309
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 113 LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQL 172
LIK P+ L D+ + G++ + GMTA ++ K G+Y+ + AA+G +G +
Sbjct: 109 LIKVPKDL------DLDDVHLAGLM-LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHI 161
Query: 173 VGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC 232
+ +A+ +G V+G+ + EK K G NY ++ + +
Sbjct: 162 MVPWARHLGATVIGTVSTEEKAE-----------TARKLGCHHTINYSTQDFAEVVREIT 210
Query: 233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMIS 269
+G+D+ ++ +G L L +R G AA G S
Sbjct: 211 GGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHAS 247
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 114/301 (37%), Gaps = 56/301 (18%)
Query: 59 MRARMSFNQDPDFS----SFTP---GSPIEGF---GVAKVVDSGHPEFKKGDLVWGTT-- 106
+RA PD + S+ P SPI G G V G + GD V G
Sbjct: 60 VRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGVSGYAVGDKVCGLANG 119
Query: 107 -GWEEYSLIKN------PQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEY 159
+ EY L+ P+G + +P +++T WA ++ +GE
Sbjct: 120 GAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFT---------VWANLFQXAGLTEGES 170
Query: 160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY 219
+ + + +G Q A+ G V +AGS K + E L K G NY
Sbjct: 171 VLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKC-------EACERLGAKRG----INY 219
Query: 220 KEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGV 279
+ E D A +K +G+DI + +G + + ++ G ++ +I+ + E V
Sbjct: 220 RSE-DFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLS---IIAFLGGAVAEKV 275
Query: 280 HNLMNVVYKRIRMEGFVVFDYFPQYSR-----FLDAVLPYIREGKVVYV-------EDVA 327
NL + KR+ + G + R L V P + G V V EDVA
Sbjct: 276 -NLSPIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVA 334
Query: 328 D 328
D
Sbjct: 335 D 335
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 113 LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQL 172
L+ P+GL +P ++ +TA+ + + + G+Y+ + A VG
Sbjct: 128 LMPIPEGLTLTQAAAIPEAW---------LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTA 178
Query: 173 VGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC 232
Q ++ G + +AGS++K+ Q+ E K G FNYK+E+ +A LK
Sbjct: 179 AIQLTRMAGAIPLVTAGSQKKL-------QMAE----KLGAAAGFNYKKEDFSEATLKFT 227
Query: 233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP 276
G+++ + +GG + + + L GR G++ +++ P
Sbjct: 228 KGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGP 271
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 113 LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQL 172
L+ P+GL +P ++ +TA+ + + + G+Y+ + A VG
Sbjct: 112 LMPIPEGLTLTQAAAIPEAW---------LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTA 162
Query: 173 VGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC 232
Q ++ G + +AGS++K+ Q+ E K G FNYK+E+ +A LK
Sbjct: 163 AIQLTRMAGAIPLVTAGSQKKL-------QMAE----KLGAAAGFNYKKEDFSEATLKFT 211
Query: 233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP 276
G+++ + +GG + + + L GR G++ +++ P
Sbjct: 212 KGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGP 255
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 105/283 (37%), Gaps = 49/283 (17%)
Query: 40 EEGSNAILVKNLYLSCDPYMRARMSFNQDPDFS-SFTPGSPIEGFGVAKVVDSGHPEFKK 98
E G + I+V+ L +S + + + D + F P S + GV + V F+
Sbjct: 50 EAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPAS--DXSGVVEAVGKSVTRFRP 107
Query: 99 GDLVWGT--TGW-------------------------EEYSLIKNPQGLFKIHHTDVPLS 131
GD V T GW EY ++ P+G F + +
Sbjct: 108 GDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVL--PEGWFVAAPKSLDAA 165
Query: 132 YYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR 191
+ L G+TAW E + G+ + V +G V Q AK G V+ ++ SR
Sbjct: 166 EAS-TLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSR 223
Query: 192 EKVWLIPMQSQLVELLKNKF--GFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKML 249
EK L F G D N EE+ ++ G D E GG L
Sbjct: 224 EK-------------LDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGL 270
Query: 250 DAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRM 292
L + GRI+ G++ + +S P G L + V + I +
Sbjct: 271 GQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISV 313
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 21/208 (10%)
Query: 142 MTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQS 201
+TA+ ++ + GE + V +A+G VG Q A+ +G V +A E W
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATAS--EDKW------ 382
Query: 202 QLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGR 261
Q VEL + ++ E+ L A R G+D+ + G+ DA L + GR
Sbjct: 383 QAVELSREHLASSRTCDF-EQQFLGATGGR----GVDVVLNSLAGEFADASLRMLPRGGR 437
Query: 262 IAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV 321
G + ++ P V + + + + F + PQ + L + EG+V+
Sbjct: 438 FLELG---KTDVRDPVEVAD----AHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVL 490
Query: 322 YVEDV-ADGLENAPAALVGLFSGRNVGK 348
V A + AP AL L R+VGK
Sbjct: 491 EPLPVTAWDVRQAPEALRHLSQARHVGK 518
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 16/206 (7%)
Query: 155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD 214
+ GE + + + SG VGQ A GC V + GS EK +Q++ +L + F
Sbjct: 1666 QPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAY--LQARFPQLDETCFA-- 1721
Query: 215 DAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLS 274
N ++ + L+ +G+D+ + + L A + + HGR G +++LS
Sbjct: 1722 ---NSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIG---KFDLS 1775
Query: 275 QPEGVHNLMNVVYKRIRMEGFVVFDYFPQ----YSRFLDAVLPYIREGKVVYVEDVADGL 330
+ M V K + G ++ F + + + + I+EG V ++
Sbjct: 1776 NNHALG--MAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPR 1833
Query: 331 ENAPAALVGLFSGRNVGKQLVVVSRE 356
AA + G+++GK ++ V E
Sbjct: 1834 TKVEAAFRYMAQGKHIGKVVIQVREE 1859
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 27/188 (14%)
Query: 102 VWGTT----GWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAP--- 154
+WG G E +L+K+ Q + K H LS+ PG+ + ++ +
Sbjct: 171 IWGFETNFGGLAEIALVKSNQLMPKPDH----LSWEEA--AAPGLVNSTAYRQLVSRNGA 224
Query: 155 --KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG 212
K+G+ + + ASG +G QFA G + S +K + + +N G
Sbjct: 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEG 284
Query: 213 FDDAFNYKEENDLDAALKRCFP---------EGIDIYFEHVGGKMLDAVLLNMRLHGRIA 263
+ +K+EN D + F E IDI FEH G + A + R G I
Sbjct: 285 YR---FWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTIT 341
Query: 264 ACGMISQY 271
C S Y
Sbjct: 342 TCASTSGY 349
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 11/157 (7%)
Query: 42 GSNAILVKNLYLS---CDPYMRARMSFNQDPDFSSFTP-GSPIEGFGVAKVVDSGHPEFK 97
G A++V+N + D Y R+ + + F P G EG GV + V FK
Sbjct: 27 GPQAVVVRNKAIGLNFIDTYYRSGLYP------APFLPSGLGAEGAGVVEAVGDEVTRFK 80
Query: 98 KGDLV-WGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKK 156
GD V +GT YS + + D L + G+T + K
Sbjct: 81 VGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKP 140
Query: 157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK 193
GE I AA+G VG L Q+AK +G ++G+ S EK
Sbjct: 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEK 177
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 31/225 (13%)
Query: 69 PDFSSFTPGSPIEGFGVAKVVDS--GHPE--FKKGDLVWGTT----GWEEYSLIKNPQGL 120
P +++ PG + ++ ++S GH + +WG G E +L+K Q +
Sbjct: 152 PGVNAWQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWGFETNFGGLAEIALVKTNQLM 211
Query: 121 FKIHHTDVPLSYYTGILGMPGMTAWAGFYEI-----CAPKKGEYIYVSAASGAVGQLVGQ 175
K H L++ PG+ + ++ A K+G+ + + ASG +G Q
Sbjct: 212 PKPKH----LTWEEA--AAPGLVNSTAYRQLVSRNGAAMKQGDNVLIWGASGGLGSYATQ 265
Query: 176 FAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP- 234
FA G + S +K + + +N G+ +K+E+ D + F
Sbjct: 266 FALAGGANPICVVSSPQKAEICRSMGAEAIIDRNAEGYK---FWKDEHTQDPKEWKRFGK 322
Query: 235 --------EGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQY 271
E IDI FEH G + A + R G I C S Y
Sbjct: 323 RIRELTGGEDIDIVFEHPGRETFGASVYVTRKGGTITTCASTSGY 367
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 27/234 (11%)
Query: 73 SFTPGSPIEGFGVAKVVDSGHPEFKKGD-LVWGTTGWEEYSLIKNPQGLFKIHHTDVP-- 129
S G E G+ V SG K GD +V+ + YS + N + +P
Sbjct: 56 SLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHN---IIADKAAILPAA 112
Query: 130 LSYYTGILG-MPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSA 188
+S+ + G+T + + K E AA+G VG + Q+AK +G ++G+
Sbjct: 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTV 172
Query: 189 GSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKM 248
G+ +K QS L K G NY+EE+ ++ + + + + ++ VG
Sbjct: 173 GTAQKA-----QSAL------KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDT 221
Query: 249 LDAVLLNMRLHGRIA----ACGMISQYNLSQPEGVHNLMNVVY-KRIRMEGFVV 297
+ L ++ G + + G ++ NL G+ N +Y R ++G++
Sbjct: 222 WERSLDCLQRRGLMVSFGNSSGAVTGVNL----GILNQKGSLYVTRPSLQGYIT 271
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 70/183 (38%), Gaps = 28/183 (15%)
Query: 113 LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEI-CAPKKGEYIYVSAASGAVGQ 171
L+ PQGL D + G G M + P+ GE I V+ ASG VG
Sbjct: 130 LVAMPQGL------DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGE-IVVTGASGGVGS 182
Query: 172 LVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR 231
+G VV +G RE E LK+ G E + K+
Sbjct: 183 TAVALLHKLGYQVVAVSG-RESTH---------EYLKS-LGASRVLPRDEFAESRPLEKQ 231
Query: 232 CFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIR 291
+ ID VG K+L VL M G +AACG+ + L +M + + +R
Sbjct: 232 VWAGAIDT----VGDKVLAKVLAQMNYGGCVAACGLAGGFTLPT-----TVMPFILRNVR 282
Query: 292 MEG 294
++G
Sbjct: 283 LQG 285
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 138 GMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK 193
G+ +TAW E+ GE + + +A+G VG AK++G + +AGS K
Sbjct: 20 GVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK 75
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 89/230 (38%), Gaps = 50/230 (21%)
Query: 74 FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT---------TGWEEYS------LIKNPQ 118
F PG + G VV S HP F++GD V T G+ EY+ L+ P+
Sbjct: 62 FVPGIDLAGV----VVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPK 117
Query: 119 GLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEI----CAPKKGEYIYVSAASGAVGQLVG 174
GL L I G G TA + + P++G + V+ A+G VG L
Sbjct: 118 GLT--------LKEAXAI-GTAGFTAALSIHRLEEHGLTPERGP-VLVTGATGGVGSLAV 167
Query: 175 QFAKLMGCYVVGSAG-SREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF 233
G V S G + E +L + ++ E+L + + ++ AA+
Sbjct: 168 SXLAKRGYTVEASTGKAAEHDYLRVLGAK--EVLAREDVXAERIRPLDKQRWAAAV---- 221
Query: 234 PEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLM 283
+ VGG+ L VL R G +A G+ + P VH +
Sbjct: 222 --------DPVGGRTLATVLSRXRYGGAVAVSGLTGGAEV--PTTVHPFI 261
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 42/257 (16%)
Query: 84 GVAKVVDSGH--PEFKKGDLV---------WGTTG-WEEYSLIKNPQGLFKIHHTDVPLS 131
GVA+VV G K GD V W T + E +LI+ P +D+PL
Sbjct: 79 GVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVP--------SDIPLQ 130
Query: 132 YYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR 191
LG+ TA+ + + G+ + +A++ VGQ V Q A +G + R
Sbjct: 131 S-AATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR 189
Query: 192 EKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE--GIDIYFEHVGGKML 249
+ +L + LK+ G + EE +K F + + VGGK
Sbjct: 190 PDI------QKLSDRLKS-LGAEHVIT--EEELRRPEMKNFFKDMPQPRLALNCVGGKSS 240
Query: 250 DAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVF----DYFP-QY 304
+L + G + G +++ QP V ++ +++K +++ GF + D+ P Q+
Sbjct: 241 TELLRQLARGGTMVTYGGMAK----QPV-VASVSLLIFKDLKLRGFWLSQWKKDHSPDQF 295
Query: 305 SRFLDAVLPYIREGKVV 321
+ + IR G++
Sbjct: 296 KELILTLCDLIRRGQLT 312
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 42/257 (16%)
Query: 84 GVAKVVDSGH--PEFKKGDLV---------WGTTG-WEEYSLIKNPQGLFKIHHTDVPLS 131
GVA+VV G K GD V W T + E +LI+ P +D+PL
Sbjct: 92 GVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVP--------SDIPLQ 143
Query: 132 YYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR 191
LG+ TA+ + + G+ + +A++ VGQ V Q A +G + R
Sbjct: 144 S-AATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR 202
Query: 192 EKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE--GIDIYFEHVGGKML 249
+ +L + LK+ G + EE +K F + + VGGK
Sbjct: 203 PDI------QKLSDRLKS-LGAEHVIT--EEELRRPEMKNFFKDMPQPRLALNCVGGKSS 253
Query: 250 DAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVF----DYFP-QY 304
+L + G + G +++ QP V ++ +++K +++ GF + D+ P Q+
Sbjct: 254 TELLRQLARGGTMVTYGGMAK----QPV-VASVSLLIFKDLKLRGFWLSQWKKDHSPDQF 308
Query: 305 SRFLDAVLPYIREGKVV 321
+ + IR G++
Sbjct: 309 KELILTLCDLIRRGQLT 325
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 40/207 (19%)
Query: 76 PGSPIEGFGVAKVVDSGHPE---FKKGDLVWGTTGW--------------EEYSLIKNPQ 118
P I G +A V + PE F+ GD V+G TG + L P
Sbjct: 62 PLPAILGXDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPA 121
Query: 119 GLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAK 178
L + +PL + +TAW G + + G+ + + G VG + Q A
Sbjct: 122 ALTXRQASVLPLVF---------ITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIAL 172
Query: 179 LMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID 238
G V +A + ++ + + + DA E D A + +G D
Sbjct: 173 ARGARVFATARGSDLEYVRDLGATPI----------DASREPE----DYAAEHTAGQGFD 218
Query: 239 IYFEHVGGKMLDAVLLNMRLHGRIAAC 265
+ ++ +GG +LDA ++ G + +C
Sbjct: 219 LVYDTLGGPVLDASFSAVKRFGHVVSC 245
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 21/141 (14%)
Query: 154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF 213
P+ GE + V+ ASG VG +G Y V + RE L L N+
Sbjct: 145 PQDGEVV-VTGASGGVGSTAVALLHKLG-YQVAAVSGREST-----HGYLKSLGANRILS 197
Query: 214 DDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNL 273
D F E L+ K+ + ID VG K+L VL G +AACG+ + L
Sbjct: 198 RDEF--AESRPLE---KQLWAGAIDT----VGDKVLAKVLAQXNYGGCVAACGLAGGFAL 248
Query: 274 SQPEGVHNLMNVVYKRIRMEG 294
+ + + +R++G
Sbjct: 249 PT-----TVXPFILRNVRLQG 264
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 16/106 (15%)
Query: 142 MTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQ 200
+TA+ +E+ ++G + V +A G VGQ V Q + V G+A + + +
Sbjct: 128 VTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSV 187
Query: 201 SQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
+ L FD +Y +E +KR EG+DI + + G
Sbjct: 188 THL---------FDRNADYVQE------VKRISAEGVDIVLDCLCG 218
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 17/142 (11%)
Query: 157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA 216
G ++ +S A+G +G L Q+AK MG V+G G K E L G +
Sbjct: 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGK-----------EELFRSIGGEVF 218
Query: 217 FNYKEENDLDAALKRCFPEGID-IYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQ 275
++ +E D+ A+ + G + V ++A +R +G GM +
Sbjct: 219 IDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCS 278
Query: 276 PEGVHNLMNVVYKRIRMEGFVV 297
++ N V K I + G V
Sbjct: 279 -----DVFNQVVKSISIVGSYV 295
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 6/123 (4%)
Query: 155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD 214
K+G+ + + ASG +G QF K G V S +K + + + + + G
Sbjct: 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGIT 278
Query: 215 D--AFNYKEENDLDAALKRCFPEGI----DIYFEHVGGKMLDAVLLNMRLHGRIAACGMI 268
D A + + + L + E DI FEH G ++ R G + CG
Sbjct: 279 DDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSS 338
Query: 269 SQY 271
S Y
Sbjct: 339 SGY 341
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 75/199 (37%), Gaps = 42/199 (21%)
Query: 88 VVDSGHPEFKKGDLVWGTT---------GWEEYS------LIKNPQGLFKIHHTDVPLSY 132
VV S P F +GD V T+ G EY+ L+ PQ L
Sbjct: 73 VVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAX------ 126
Query: 133 YTGILGMPGMTAWAGFYEI----CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSA 188
+ G G TA + + +P+KG + A G G V K G VV S
Sbjct: 127 ---VYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSXLNK-RGYDVVAST 182
Query: 189 GSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKM 248
G+RE + LK + G + + E+ D LK + + VGGK
Sbjct: 183 GNREA----------ADYLK-QLGASEVIS--REDVYDGTLKALSKQQWQGAVDPVGGKQ 229
Query: 249 LDAVLLNMRLHGRIAACGM 267
L ++L ++ G +A G+
Sbjct: 230 LASLLSKIQYGGSVAVSGL 248
>pdb|3NGY|A Chain A, Crystal Structure Of Rnase T (E92g Mutant)
pdb|3NGY|B Chain B, Crystal Structure Of Rnase T (E92g Mutant)
pdb|3NGY|C Chain C, Crystal Structure Of Rnase T (E92g Mutant)
pdb|3NGY|D Chain D, Crystal Structure Of Rnase T (E92g Mutant)
pdb|3NGZ|A Chain A, Crystal Structure Of Rnase T In Complex With A
Non-Preferred Ssdna (Gc) With One Mg In The Active Site
pdb|3NGZ|B Chain B, Crystal Structure Of Rnase T In Complex With A
Non-Preferred Ssdna (Gc) With One Mg In The Active Site
pdb|3V9U|A Chain A, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aat) With Two Mg In The Active Site
pdb|3V9U|B Chain B, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aat) With Two Mg In The Active Site
pdb|3V9U|C Chain C, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aat) With Two Mg In The Active Site
pdb|3V9U|D Chain D, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aat) With Two Mg In The Active Site
pdb|3V9W|A Chain A, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tta) With Two Mg In The Active Site
pdb|3V9W|B Chain B, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tta) With Two Mg In The Active Site
pdb|3V9W|C Chain C, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tta) With Two Mg In The Active Site
pdb|3V9W|D Chain D, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tta) With Two Mg In The Active Site
pdb|3VA3|A Chain A, Crystal Structure Of Rnase T In Complex With A Duplex Dna
Product (Stem Loop Dna With 2 Nucleotide 3' Overhang)
pdb|3VA3|B Chain B, Crystal Structure Of Rnase T In Complex With A Duplex Dna
Product (Stem Loop Dna With 2 Nucleotide 3' Overhang)
Length = 235
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 13 VILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPD-- 70
V++ GF +TD L++ ++I+LK++E + L+ +P++ A N P+
Sbjct: 40 VVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGA----NLQPEAL 95
Query: 71 -FSSFTPGSPIEG 82
F+ P P G
Sbjct: 96 AFNGIDPNDPDRG 108
>pdb|3NH0|A Chain A, Crystal Structure Of Rnase T In Complex With A
Non-Preferred Ssdna (Aac)
pdb|3NH0|B Chain B, Crystal Structure Of Rnase T In Complex With A
Non-Preferred Ssdna (Aac)
pdb|3NH1|A Chain A, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tagg) With Two Mg In The Active Site
pdb|3NH1|B Chain B, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tagg) With Two Mg In The Active Site
pdb|3NH1|C Chain C, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tagg) With Two Mg In The Active Site
pdb|3NH1|D Chain D, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tagg) With Two Mg In The Active Site
pdb|3NH2|A Chain A, Crystal Structure Of Rnase T In Complex With A Stem Dna
With A 3' Overhang
pdb|3NH2|B Chain B, Crystal Structure Of Rnase T In Complex With A Stem Dna
With A 3' Overhang
pdb|3NH2|E Chain E, Crystal Structure Of Rnase T In Complex With A Stem Dna
With A 3' Overhang
pdb|3NH2|F Chain F, Crystal Structure Of Rnase T In Complex With A Stem Dna
With A 3' Overhang
pdb|3V9S|A Chain A, Crystal Structure Of Rnase T In Complex With A Product
Ssdna (Aac) With One Mg In The Active Site
pdb|3V9S|B Chain B, Crystal Structure Of Rnase T In Complex With A Product
Ssdna (Aac) With One Mg In The Active Site
pdb|3V9X|A Chain A, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aaa) With Two Mg In The Active Site
pdb|3V9X|B Chain B, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aaa) With Two Mg In The Active Site
pdb|3V9X|C Chain C, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aaa) With Two Mg In The Active Site
pdb|3V9X|D Chain D, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aaa) With Two Mg In The Active Site
pdb|3V9Z|A Chain A, Crystal Structure Of Rnase T In Complex With A Product
Ssdna (Acc) With One Mg In The Active Site
pdb|3V9Z|B Chain B, Crystal Structure Of Rnase T In Complex With A Product
Ssdna (Acc) With One Mg In The Active Site
pdb|3VA0|A Chain A, Crystal Structure Of Rnase T In Complex With A
Di-Nucleotide Product (Gg) With One Mg In The Active
Site
pdb|3VA0|B Chain B, Crystal Structure Of Rnase T In Complex With A
Di-Nucleotide Product (Gg) With One Mg In The Active
Site
Length = 235
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 13 VILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPD-- 70
V++ GF +TD L++ ++I+LK++E + L+ +P++ A N P+
Sbjct: 40 VVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGA----NLQPEAL 95
Query: 71 -FSSFTPGSPIEG 82
F+ P P G
Sbjct: 96 AFNGIDPNDPDRG 108
>pdb|2IBP|A Chain A, Crystal Structure Of Citrate Synthase From Pyrobaculum
Aerophilum
pdb|2IBP|B Chain B, Crystal Structure Of Citrate Synthase From Pyrobaculum
Aerophilum
Length = 409
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 24/142 (16%)
Query: 12 QVILKNYVE-GFPKETDMLVKASSISLKVEEGSNAILV--KNLYLSCDPYMRARMSFNQD 68
++ ++NY+E G P + +V+A++ + G ++ +Y + DP + F++D
Sbjct: 254 EMAVRNYLEIGTPAKAKEIVEAAT-----KPGGPKLMGVGHRVYKAYDPRAKIFKEFSRD 308
Query: 69 PDFSSFTPGSPIEGFGVAKVVDS---GHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHH 125
+ F G P F +A ++ HP F++ L W + ++
Sbjct: 309 -YVAKF--GDPQNLFAIASAIEQEVLSHPYFQQRKLYPNVDFWSGIAF----------YY 355
Query: 126 TDVPLSYYTGILGMPGMTAWAG 147
+P Y+T I M + W
Sbjct: 356 MGIPYEYFTPIFAMSRVVGWVA 377
>pdb|1WZA|A Chain A, Crystal Structure Of Alpha-Amylase From H.Orenii
Length = 488
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Query: 210 KFGFDDAFNYKEENDLDAALKRCFPEGID--------IYFEHVG-GKMLDAVLLNMRLHG 260
K+GFD FN+K + A K FP G + +Y VG G +DA L
Sbjct: 246 KYGFDSTFNFKLAEAVIATAKAGFPFGFNKKAKHIYGVYDREVGFGNYIDAPFLTNHDQN 305
Query: 261 RI 262
RI
Sbjct: 306 RI 307
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 109/291 (37%), Gaps = 63/291 (21%)
Query: 74 FTPGSPIEGFGVAKVVDSGHPEFKKGDLV---W----------GTTGWEE---------Y 111
F PG EG G V SG K+GD V W TGWE Y
Sbjct: 63 FIPGH--EGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGY 120
Query: 112 S--------LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVS 163
S ++ +P I +V + IL G+T + G + A + G+++ +S
Sbjct: 121 SVNGGYAEYVLADPN-YVGILPKNVEFAEIAPIL-CAGVTVYKGLKQTNA-RPGQWVAIS 177
Query: 164 AASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEEN 223
G +G + Q+A+ MG +V I + +EL + K G N ++E+
Sbjct: 178 GIGG-LGHVAVQYARAMGLHVAA----------IDIDDAKLELAR-KLGASLTVNARQED 225
Query: 224 DLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP------E 277
++ A++R + V + R G IA G+ + P +
Sbjct: 226 PVE-AIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGL-PPGDFPTPIFDVVLK 283
Query: 278 GVHNLMNVVYKRIRM--------EGFVVFDYFPQYSRFLDAVLPYIREGKV 320
G+H ++V R + EG V P ++ +L +R G++
Sbjct: 284 GLHIAGSIVGTRADLQEALDFAGEGLVKATIHPGKLDDINQILDQMRAGQI 334
>pdb|2F03|A Chain A, Crystal Structure Of Tetrameric Restriction Endonuclease
Sfii In Complex With Cognate Dna (Partial Bound Form)
pdb|2F03|C Chain C, Crystal Structure Of Tetrameric Restriction Endonuclease
Sfii In Complex With Cognate Dna (Partial Bound Form)
Length = 269
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 48 VKNLYLSCDPYMRARMSFNQDPDFSSFTPG--SPIEGFGVAKV 88
+K++Y+ P+ R + +N DPD S F G SP G VA++
Sbjct: 178 LKSIYVLSLPHARLKQRYNPDPDTSFFGAGKHSPARG-EVARI 219
>pdb|2EZV|A Chain A, Crystal Structure Of Tetrameric Restriction Endonuclease
Sfii Bound To Cognate Dna.
pdb|2EZV|B Chain B, Crystal Structure Of Tetrameric Restriction Endonuclease
Sfii Bound To Cognate Dna
Length = 269
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 48 VKNLYLSCDPYMRARMSFNQDPDFSSFTPG--SPIEGFGVAKV 88
+K++Y+ P+ R + +N DPD S F G SP G VA++
Sbjct: 178 LKSIYVLSLPHARLKQRYNPDPDTSFFGAGKHSPARG-EVARI 219
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 27/164 (16%)
Query: 112 SLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQ 171
+L+ P+GL P+S+ T L + A + GE + V AA+GA+G
Sbjct: 91 ALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQA----------RPGEKVLVQAAAGALGT 140
Query: 172 LVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR 231
Q A+ MG V+ +A EK+ L P+ G ++A Y E + A
Sbjct: 141 AAVQVARAMGLRVLAAASRPEKLAL-PLA----------LGAEEAATYAEVPERAKAWG- 188
Query: 232 CFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQ 275
G+D+ E V GK ++ L + GR+ I L +
Sbjct: 189 ----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIAPIPPLRLMR 227
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 63/168 (37%), Gaps = 27/168 (16%)
Query: 89 VDSGHPEFKKGDLVWGTTGWE----------EYSLIKNPQGLFKIHHTDVPLSYYTGILG 138
V +G P+ G L GW+ EY + + I D+PL I
Sbjct: 95 VQAGFPQHSNGML----AGWKFSNFKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITD 150
Query: 139 MPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIP 198
M MT E+ + G + V GAVG + AKL G + GSR P
Sbjct: 151 M--MTTGFHGAELADIQMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSR------P 201
Query: 199 MQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
+ + + +G D NYK + +D +K +G+D GG
Sbjct: 202 ICVEAAKF----YGATDILNYKNGHIVDQVMKLTNGKGVDRVIMAGGG 245
>pdb|1DQS|A Chain A, Crystal Structure Of Dehydroquinate Synthase (Dhqs)
Complexed With Carbaphosphonate, Nad+ And Zn2+
pdb|1DQS|B Chain B, Crystal Structure Of Dehydroquinate Synthase (Dhqs)
Complexed With Carbaphosphonate, Nad+ And Zn2+
pdb|1NR5|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+, Nad And Carbaphosphonate
pdb|1NR5|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+, Nad And Carbaphosphonate
pdb|1NRX|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Nad
pdb|1NRX|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Nad
pdb|1NUA|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+
pdb|1NUA|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+
pdb|1NVA|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Adp
pdb|1NVA|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Adp
pdb|1NVB|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Carbaphosphonate
pdb|1NVB|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Carbaphosphonate
pdb|1NVD|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Carbaphosphonate
pdb|1NVD|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Carbaphosphonate
pdb|1NVE|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Nad
pdb|1NVE|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Nad
pdb|1NVE|C Chain C, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Nad
pdb|1NVE|D Chain D, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Nad
pdb|1NVF|A Chain A, Crystal Structure Of 3-dehydroquinate Synthase (dhqs) In
Complex With Zn2+, Adp And Carbaphosphonate
pdb|1NVF|B Chain B, Crystal Structure Of 3-dehydroquinate Synthase (dhqs) In
Complex With Zn2+, Adp And Carbaphosphonate
pdb|1NVF|C Chain C, Crystal Structure Of 3-dehydroquinate Synthase (dhqs) In
Complex With Zn2+, Adp And Carbaphosphonate
pdb|1SG6|A Chain A, Crystal Structure Of Aspergillus Nidulans 3-Dehydroquinate
Synthase (Andhqs) In Complex With Zn2+ And Nad+, At 1.7d
pdb|1SG6|B Chain B, Crystal Structure Of Aspergillus Nidulans 3-Dehydroquinate
Synthase (Andhqs) In Complex With Zn2+ And Nad+, At 1.7d
Length = 393
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRI 290
H G ++A+L LHG A GM+ + L++ G+ L V RI
Sbjct: 271 HSIGHAIEAILTPQILHGECVAIGMVKEAELARHLGI--LKGVAVSRI 316
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 27/155 (17%)
Query: 112 SLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQ 171
+L+ P+GL P+S+ T L + A + GE + V AA+GA+G
Sbjct: 91 ALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQA----------RPGEKVLVQAAAGALGT 140
Query: 172 LVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR 231
Q A+ MG V+ +A EK+ L P+ G ++A Y E + A
Sbjct: 141 AAVQVARAMGLRVLAAASRPEKLAL-PLA----------LGAEEAATYAEVPERAKAWG- 188
Query: 232 CFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACG 266
G+D+ E V GK ++ L + GR+ G
Sbjct: 189 ----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIG 218
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,288,942
Number of Sequences: 62578
Number of extensions: 507146
Number of successful extensions: 1283
Number of sequences better than 100.0: 52
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1191
Number of HSP's gapped (non-prelim): 52
length of query: 356
length of database: 14,973,337
effective HSP length: 100
effective length of query: 256
effective length of database: 8,715,537
effective search space: 2231177472
effective search space used: 2231177472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)