BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018405
(356 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 342 bits (876), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 173/354 (48%), Positives = 235/354 (66%), Gaps = 11/354 (3%)
Query: 8 EEETNNFSYAMELAGAIVLPAAMHAVVELDVFEIISKAGAGAKLSVAEIVAQIPLKDNNP 67
+EE N F AM+LA A VLP + + +ELD+ EII+KAG GA++S EI +Q+P NP
Sbjct: 16 DEEANLF--AMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPT--TNP 71
Query: 68 EAAAMMLDRVLRLLVSYNALHCSF---VDG--QRLYSLASVAKYFVRNNQNGASLRPYMA 122
+A +MLDR+LRLL Y L CS DG QRLY LA+VAKY V+N ++G S+
Sbjct: 72 DAP-VMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKN-EDGVSISALNL 129
Query: 123 LRLDKVPMDYWFRLKDQILEGGTAFNKAHGMSIYDYMGVDSRFNDVFNTGMLGHTCVVME 182
+ DKV M+ W+ LKD +L+GG FNKA+GM+ ++Y G D RFN VFN GM H+ + M+
Sbjct: 130 MNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMK 189
Query: 183 KVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPRIKGINYDLPYVIKNAPSYLGIEHVG 242
K+LE+Y GFE A +N I+SKYP IKGIN+DLP+VI++APSY G+EHVG
Sbjct: 190 KILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVG 249
Query: 243 GDFFESVPEADTILMKWVLSSFDDEQSLKLLKNCYKALPDGGKLLNVNVTIPEVPENSAT 302
GD F S+P+AD + MKW+ + DE LK LKNCY+ALPD GK++ +P P++S
Sbjct: 250 GDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLA 309
Query: 303 SREISILDTICLFQVPHGRERTKQEYSELAIKAGFKGVNYEYGACNLYVMEFLK 356
++ + +D I L P G+ERT++E+ +LA AGF+G A N Y+MEFLK
Sbjct: 310 TKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 317 bits (811), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 166/356 (46%), Positives = 227/356 (63%), Gaps = 12/356 (3%)
Query: 7 QEEETNNFSYAMELAGAIVLPAAMHAVVELDVFEIISKA-GAGAKLSVAEIVAQIPLKDN 65
+EE N F AM+LA A VLP A+ A +ELDV EI++K+ +S AEI AQ+P
Sbjct: 17 SDEEANLF--AMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLP--TT 72
Query: 66 NPEAAAMMLDRVLRLLVSYNALHCSFVD-----GQRLYSLASVAKYFVRNNQNGASLRPY 120
NPEA +MLDRVLRLL SY+ + + + +RLY LA V K F+ N++G SL P+
Sbjct: 73 NPEAP-VMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCK-FLTKNEDGVSLAPF 130
Query: 121 MALRLDKVPMDYWFRLKDQILEGGTAFNKAHGMSIYDYMGVDSRFNDVFNTGMLGHTCVV 180
+ L DKV ++ WF LKD ILEGG FNKA+GM+I+DY G D R N VFN GM ++ +
Sbjct: 131 LLLATDKVLLEPWFYLKDAILEGGIPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTIT 190
Query: 181 MEKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPRIKGINYDLPYVIKNAPSYLGIEH 240
M+K+LE Y GFE A +MI++KYP I IN+DLP+VI++AP++ G+EH
Sbjct: 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEH 250
Query: 241 VGGDFFESVPEADTILMKWVLSSFDDEQSLKLLKNCYKALPDGGKLLNVNVTIPEVPENS 300
+GGD F+ VP+ D I +KW+ + DE LKLLKNCY ALPD GK++ +P P+ S
Sbjct: 251 LGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPS 310
Query: 301 ATSREISILDTICLFQVPHGRERTKQEYSELAIKAGFKGVNYEYGACNLYVMEFLK 356
++ + D + L P G+ERT++E+ LA+ +GF+G A N YVMEFLK
Sbjct: 311 IATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 286 bits (731), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/361 (42%), Positives = 215/361 (59%), Gaps = 13/361 (3%)
Query: 1 MASMADQEEETNNFSYAMELAGAIVLPAAMHAVVELDVFEIISKAGAGAKLSVAEIVAQI 60
MA+ AD++ +A++LA + VLP + +EL + EI+ AG G L+ E+ A++
Sbjct: 12 MAASADEDA----CMFALQLASSSVLPMTLKNAIELGLLEILVAAG-GKSLTPTEVAAKL 66
Query: 61 PLKDNNPEAAAMMLDRVLRLLVSYNALHCSFVDGQ-----RLYSLASVAKYFVRNNQNGA 115
P NPEA M +DR+LRLL SYN + C +G+ R Y A V K F+ N++G
Sbjct: 67 P-SAANPEAPDM-VDRILRLLASYNVVTCLVEEGKDGRLSRSYGAAPVCK-FLTPNEDGV 123
Query: 116 SLRPYMALRLDKVPMDYWFRLKDQILEGGTAFNKAHGMSIYDYMGVDSRFNDVFNTGMLG 175
S+ + DKV M+ W+ LKD +L+GG FNKA+GMS ++Y G D RFN VFN GM
Sbjct: 124 SMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMSAFEYHGTDPRFNRVFNEGMKN 183
Query: 176 HTCVVMEKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPRIKGINYDLPYVIKNAPSY 235
H+ ++ +K+LE Y GFE AT+ I + YP IKG+N+DLP+VI AP +
Sbjct: 184 HSIIITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQF 243
Query: 236 LGIEHVGGDFFESVPEADTILMKWVLSSFDDEQSLKLLKNCYKALPDGGKLLNVNVTIPE 295
G+ HVGGD F+ VP DTILMKW+L + D+ LLKNCY ALP GK++ V +P
Sbjct: 244 PGVTHVGGDMFKEVPSGDTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPV 303
Query: 296 VPENSATSREISILDTICLFQVPHGRERTKQEYSELAIKAGFKGVNYEYGACNLYVMEFL 355
PE + +S+ + +D I L P GRER ++E+ LA AGF GV Y N + +EF
Sbjct: 304 NPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYANAWAIEFT 363
Query: 356 K 356
K
Sbjct: 364 K 364
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 227 bits (579), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 137/364 (37%), Positives = 207/364 (56%), Gaps = 12/364 (3%)
Query: 1 MASMADQEEETNNFSYAMELAGAIVLPAAMHAVVELDVFEIISKAGA-GAKLSVAEIVAQ 59
+++ ++Q E++ S AM L +V PA ++A ++L++FEII+KA GA +S +EI ++
Sbjct: 13 ISATSEQTEDSACLS-AMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASK 71
Query: 60 IPLKDNNPEAAAMMLDRVLRLLVSYNALHCS---FVDG--QRLYSLASVAKYFVRNNQNG 114
+P + + LDR+LRLL SY+ L + DG +R+Y L+ V KY V + G
Sbjct: 72 LPASTQHSDLPNR-LDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRG 130
Query: 115 ASLRPYMALRLDKVPMDYWFRLKDQIL-EGGTAFNKAHGMSIYDYMGVDSRFNDVFNTGM 173
L + + W K+ ++ E F HG++ Y++MG D + N +FN M
Sbjct: 131 Y-LASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSM 189
Query: 174 LGHTCVVMEKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPRIKGINYDLPYVIKNAP 233
+ M+++LE Y GFE L +IISKYP IKGIN+DLP VI+NAP
Sbjct: 190 VDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAP 249
Query: 234 SYLGIEHVGGDFFESVPEADTILMKWVLSSFDDEQSLKLLKNCYKALPDGGKLLNVNVTI 293
GIEHVGGD F SVP+ D +++K V ++ DE+ ++ L NC+KAL GK++ V +
Sbjct: 250 PLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFIL 309
Query: 294 PEVPENSATSREISILDTICLFQVPHGRERTKQEYSELAIKAGFKGVNYEYGACN-LYVM 352
PE P S S+ +S LD + +F GRERT+++Y +L+ +GF A N L VM
Sbjct: 310 PEEPNTSEESKLVSTLDNL-MFITVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVM 368
Query: 353 EFLK 356
EF K
Sbjct: 369 EFYK 372
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 196/364 (53%), Gaps = 12/364 (3%)
Query: 1 MASMADQEEETNNFSYAMELAGAIVLPAAMHAVVELDVFEIISKAGA-GAKLSVAEIVAQ 59
+++ ++Q E++ S A L +V PA ++A ++L++FEII+KA GA S +EI ++
Sbjct: 13 ISATSEQTEDSACLS-AXVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFXSPSEIASK 71
Query: 60 IPLKDNNPEAAAMMLDRVLRLLVSYNALHCS---FVDG--QRLYSLASVAKYFVRNNQNG 114
+P + + + R LRLL SY+ L + DG +R+Y L+ V KY V + G
Sbjct: 72 LPASTQHSDLPNRLD-RXLRLLASYSVLTSTTRTIEDGGAERVYGLSXVGKYLVPDESRG 130
Query: 115 ASLRPYMALRLDKVPMDYWFRLKDQIL-EGGTAFNKAHGMSIYDYMGVDSRFNDVFNTGM 173
L + + W K+ ++ E F HG++ Y++ G D + N +FN
Sbjct: 131 Y-LASFTTFLCYPALLQVWXNFKEAVVDEDIDLFKNVHGVTKYEFXGKDKKXNQIFNKSX 189
Query: 174 LGHTCVVMEKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPRIKGINYDLPYVIKNAP 233
+ ++ LE Y GFE L +IISKYP IKGIN+DLP VI+NAP
Sbjct: 190 VDVCATEXKRXLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAP 249
Query: 234 SYLGIEHVGGDFFESVPEADTILMKWVLSSFDDEQSLKLLKNCYKALPDGGKLLNVNVTI 293
GIEHVGGD F SVP+ D ++K V ++ DE+ ++ L NC+KAL GK++ V +
Sbjct: 250 PLSGIEHVGGDXFASVPQGDAXILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFIL 309
Query: 294 PEVPENSATSREISILDTICLFQVPHGRERTKQEYSELAIKAGFKGVNYEYGACN-LYVM 352
PE P S S+ +S LD + V GRERT+++Y +L+ +GF A N L V
Sbjct: 310 PEEPNTSEESKLVSTLDNLXFITV-GGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVX 368
Query: 353 EFLK 356
EF K
Sbjct: 369 EFYK 372
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 148/322 (45%), Gaps = 19/322 (5%)
Query: 23 AIVLPAAMHAVVELDVFEIISKAGAGAKLSVAEIVAQIPLKDNNPEAAAMMLDRVLRLLV 82
A + ++ VE+++ II G LS + Q+P + + R++R L
Sbjct: 26 AFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVP------SSKIGNVRRLMRYL- 78
Query: 83 SYNALHCSFVDGQRLYSLASVAKYFVRNNQNGASLRPYMALRLDKVPMDYWFRLKDQILE 142
++N + Y+L ++ VR + L P + LD + LK I E
Sbjct: 79 AHNGFFEIITKEEESYALTVASELLVRGSD--LCLAPMVECVLDPTLSGSYHELKKWIYE 136
Query: 143 GG-TAFNKAHGMSIYDYMGVDSRFNDVFNTGMLGHTCVVMEKVLESYKGFEHXXXXXXXX 201
T F G +D++ + +N FN M + ++ + + F+
Sbjct: 137 EDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVG 196
Query: 202 XXXXATLNMIISKYPRIKGINYDLPYVIKNAPSYLGIEHVGGDFFESVPEADTILMKWVL 261
T +I +P++K I +D P V++N + +VGGD F S+P AD +L+K++L
Sbjct: 197 GGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYIL 256
Query: 262 SSFDDEQSLKLLKNCYKALPDGGKLLNVN----VTIPEVPENSATSREISI-LDTICLFQ 316
++ D+ L++LK C +A+ + GK V V + EN T ++ + ++ CL
Sbjct: 257 HNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACL-- 314
Query: 317 VPHGRERTKQEYSELAIKAGFK 338
+G+ER ++E+ +L I+AGF+
Sbjct: 315 --NGKERNEEEWKKLFIEAGFQ 334
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 149/323 (46%), Gaps = 23/323 (7%)
Query: 29 AMHAVVELDVFEIISKAGAGAKLSVAEIVAQIPLKDNNPEAAAMMLDRVLRLLVSYNALH 88
A+ + +EL + + I G ++++E+ + + L +P + +L R LRLL
Sbjct: 25 ALKSAMELGIADAIH--NHGKPMTLSELASSLKL---HP-SKVNILHRFLRLLTHNGFFA 78
Query: 89 CSFVDGQRL-------YSLASVAKYFVRNNQNGASLRPYMALRLDKVPMDYWFRLKDQIL 141
+ V G+ YSL +K + L + L +D W K
Sbjct: 79 KTIVKGKEGDEEEEIAYSLTPPSKLLISGKP--TCLSSIVKGALHPSSLDMWSSSKKWFN 136
Query: 142 EGG--TAFNKAHGMSIYDYMGVDSRFN--DVFNTGMLGHTCVVMEKVLESYKGFEHXXXX 197
E T F A G S +D++ DS + +F M + + + E+ + FE
Sbjct: 137 EDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQENKRVFEGLESL 196
Query: 198 XXXXXXXXATLNMIISKYPRIKGINYDLPYVIKNAPSYLGIEHVGGDFFESVPEADTILM 257
+I +P +K +D P V+ N + VGGD F+S+P AD +L+
Sbjct: 197 VDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLL 256
Query: 258 KWVLSSFDDEQSLKLLKNCYKALP---DGGKLLNVNVTIPEVPENSATSREISILDTICL 314
KWVL ++DEQSLK+LKN +A+ GK++ ++++I E ++ + E+ + + +
Sbjct: 257 KWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLT-ELQLDYDLVM 315
Query: 315 FQVPHGRERTKQEYSELAIKAGF 337
+ G+ERTKQE+ +L AGF
Sbjct: 316 LTMFLGKERTKQEWEKLIYDAGF 338
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 149/323 (46%), Gaps = 23/323 (7%)
Query: 29 AMHAVVELDVFEIISKAGAGAKLSVAEIVAQIPLKDNNPEAAAMMLDRVLRLLVSYNALH 88
A+ + +EL + + I G ++++E+ + + L +P + +L R LRLL
Sbjct: 26 ALKSAMELGIADAIH--NHGKPMTLSELASSLKL---HP-SKVNILHRFLRLLTHNGFFA 79
Query: 89 CSFVDGQRL-------YSLASVAKYFVRNNQNGASLRPYMALRLDKVPMDYWFRLKDQIL 141
+ V G+ YSL +K + L + L +D W K
Sbjct: 80 KTIVKGKEGDEEEEIAYSLTPPSKLLISGKP--TCLSSIVKGALHPSSLDMWSSSKKWFN 137
Query: 142 EGG--TAFNKAHGMSIYDYMGVDSRFN--DVFNTGMLGHTCVVMEKVLESYKGFEHXXXX 197
E T F A G S +D++ DS + +F M + + + E+ + FE
Sbjct: 138 EDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQENKRVFEGLESL 197
Query: 198 XXXXXXXXATLNMIISKYPRIKGINYDLPYVIKNAPSYLGIEHVGGDFFESVPEADTILM 257
+I +P +K +D P V+ N + VGGD F+S+P AD +L+
Sbjct: 198 VDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLL 257
Query: 258 KWVLSSFDDEQSLKLLKNCYKALP---DGGKLLNVNVTIPEVPENSATSREISILDTICL 314
KWVL ++DEQSLK+LKN +A+ GK++ ++++I E ++ + E+ + + +
Sbjct: 258 KWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLT-ELQLDYDLVM 316
Query: 315 FQVPHGRERTKQEYSELAIKAGF 337
+ G+ERTKQE+ +L AGF
Sbjct: 317 LTMFLGKERTKQEWEKLIYDAGF 339
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 149/323 (46%), Gaps = 23/323 (7%)
Query: 29 AMHAVVELDVFEIISKAGAGAKLSVAEIVAQIPLKDNNPEAAAMMLDRVLRLLVSYNALH 88
A+ + +EL + + I G ++++E+ + + L +P + +L R LRLL
Sbjct: 22 ALKSAMELGIADAIH--NHGKPMTLSELASSLKL---HP-SKVNILHRFLRLLTHNGFFA 75
Query: 89 CSFVDGQRL-------YSLASVAKYFVRNNQNGASLRPYMALRLDKVPMDYWFRLKDQIL 141
+ V G+ YSL +K + L + L +D W K
Sbjct: 76 KTIVKGKEGDEEEEIAYSLTPPSKLLISGKP--TCLSSIVKGALHPSSLDMWSSSKKWFN 133
Query: 142 EGG--TAFNKAHGMSIYDYMGVDSRFN--DVFNTGMLGHTCVVMEKVLESYKGFEHXXXX 197
E T F A G S +D++ DS + +F M + + + E+ + FE
Sbjct: 134 EDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQENKRVFEGLESL 193
Query: 198 XXXXXXXXATLNMIISKYPRIKGINYDLPYVIKNAPSYLGIEHVGGDFFESVPEADTILM 257
+I +P +K +D P V+ N + VGGD F+S+P AD +L+
Sbjct: 194 VDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLL 253
Query: 258 KWVLSSFDDEQSLKLLKNCYKALP---DGGKLLNVNVTIPEVPENSATSREISILDTICL 314
KWVL ++DEQSLK+LKN +A+ GK++ ++++I E ++ + E+ + + +
Sbjct: 254 KWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLT-ELQLDYDLVM 312
Query: 315 FQVPHGRERTKQEYSELAIKAGF 337
+ G+ERTKQE+ +L AGF
Sbjct: 313 LTMFLGKERTKQEWEKLIYDAGF 335
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 145/322 (45%), Gaps = 19/322 (5%)
Query: 23 AIVLPAAMHAVVELDVFEIISKAGAGAKLSVAEIVAQIPLKDNNPEAAAMMLDRVLRLLV 82
A + ++ VE ++ II G LS + Q+P ++ + R L +
Sbjct: 26 AFIDSXSLKWAVEXNIPNIIQNHGKPISLSNLVSILQVP-------SSKIGNVRRLXRYL 78
Query: 83 SYNALHCSFVDGQRLYSLASVAKYFVRNNQNGASLRPYMALRLDKVPMDYWFRLKDQILE 142
++N + Y+L ++ VR + L P + LD + LK I E
Sbjct: 79 AHNGFFEIITKEEESYALTVASELLVRGSD--LCLAPXVECVLDPTLSGSYHELKKWIYE 136
Query: 143 GG-TAFNKAHGMSIYDYMGVDSRFNDVFNTGMLGHTCVVMEKVLESYKGFEHXXXXXXXX 201
T F G +D++ + +N FN + ++ + + F+
Sbjct: 137 EDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAXASDSKLINLALRDCDFVFDGLESIVDVG 196
Query: 202 XXXXATLNMIISKYPRIKGINYDLPYVIKNAPSYLGIEHVGGDFFESVPEADTILMKWVL 261
T +I +P++K I +D P V++N + +VGGD F S+P AD +L+K++L
Sbjct: 197 GGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDXFTSIPNADAVLLKYIL 256
Query: 262 SSFDDEQSLKLLKNCYKALPDGGKLLNVNV--TIPEVPENSATSREISILDTI---CLFQ 316
++ D+ L++LK C +A+ + GK V + + + ++ +I +L + CL
Sbjct: 257 HNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDXVIDKKKDENQVTQIKLLXDVNXACL-- 314
Query: 317 VPHGRERTKQEYSELAIKAGFK 338
+G+ER ++E+ +L I+AGF+
Sbjct: 315 --NGKERNEEEWKKLFIEAGFQ 334
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 156/329 (47%), Gaps = 28/329 (8%)
Query: 23 AIVLPAAMHAVVELDVFEIISKAGAGAKLSVAEIVAQIPLKDNNPEAAAMMLDRVLRLL- 81
A V ++ +E+++ II G LS + QIP + +D V RL+
Sbjct: 26 AFVDSMSLKWSIEMNIPNIIHNHGKPITLSNLVSILQIP---------STKVDNVQRLMR 76
Query: 82 -VSYNALHCSFVDGQRL------YSLASVAKYFVRNNQNGASLRPYMALRLDKVPMDYWF 134
+++N + Q L Y+L ++ V+ + L P + LD +
Sbjct: 77 YLAHNGFF-EIITNQELENEEEAYALTVASELLVKGTE--LCLAPMVECVLDPTLSTSFH 133
Query: 135 RLKDQILEGG-TAFNKAHGMSIYDYMGVDSRFNDVFNTGMLGHTCVVMEKVLESYKGFEH 193
LK + E T F G +++++ + +N ++N + + ++ + + FE
Sbjct: 134 NLKKWVYEEDLTLFAVNLGCDLWEFLNKNPEYNTLYNDALASDSKMINLAMKDCNLVFEG 193
Query: 194 XXXXXXXXXXXXATLNMIISKYPRIKGINYDLPYVIKNAPSYLGIEHVGGDFFESVPEAD 253
T +I +P++ + +D P V++N + +VGGD F SVP+AD
Sbjct: 194 LESIVDVGGGNGTTGKIICETFPKLTCVVFDRPKVVENLCGSNNLTYVGGDMFISVPKAD 253
Query: 254 TILMKWVLSSFDDEQSLKLLKNCYKALP-DG--GKLLNVNVTIPEVP-ENSATSREISIL 309
+L+K VL + D+ +K+LK C +A+ DG GK++ +++ I E EN T +I +L
Sbjct: 254 AVLLKAVLHDWTDKDCIKILKKCKEAVTSDGKRGKVIVIDMVINEKKDENQLT--QIKLL 311
Query: 310 DTICLFQVPHGRERTKQEYSELAIKAGFK 338
+ + V +G+ER ++E+ +L I+AGF+
Sbjct: 312 MNVTISCV-NGKERNEEEWKKLFIEAGFQ 339
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 115/279 (41%), Gaps = 35/279 (12%)
Query: 74 LDRVLRLLVSYNALHCSFVDGQRLYSLASVAKYFVRNNQNGASLR-----PYMALRLDKV 128
L RVLRLL + + S DG+ ++L GA+LR P A L
Sbjct: 72 LRRVLRLLAVRDVVRES--DGR--FAL----------TDKGAALRSDSPVPARAGILXFT 117
Query: 129 PMDYW---FRLKDQILEGGTAFNKAHGMSIYDYMGVDSRFNDVFNTGMLGHTCVVMEKVL 185
+W R+ + AF G S+ Y D+ ++ G T E ++
Sbjct: 118 DTXFWTXSHRVASALGPERPAFADIFGSSLDAYFDGDAEVEALYYEGX--ETVSAAEHLI 175
Query: 186 ESYKG-FEHXXXXXXXXXXXXATLNMIISKYPRIKGINYDLPYVIK----NAPSYLG-IE 239
+ G F L ++ ++P ++G+ D V+ +AP G +
Sbjct: 176 LARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWK 235
Query: 240 HVGGDFFESVPEADTILMKWVLSSFDDEQSLKLLKNCYKALPDGGKLLNVNVTIPEVPEN 299
V GDF VP AD ++K +L ++ DE S+++L NC + P G++L ++ +PE +
Sbjct: 236 VVEGDFLREVPHADVHVLKRILHNWGDEDSVRILTNCRRVXPAHGRVLVIDAVVPE-GND 294
Query: 300 SATSREISILDTICLFQVPHGRERTKQEYSELAIKAGFK 338
+ S+E G+ERT E L AG +
Sbjct: 295 AHQSKEXD----FXXLAARTGQERTAAELEPLFTAAGLR 329
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 124 RLDKVPMDY--WFRLKDQILEGGTAFNKAHGMSIYDYMGVDSRFNDVFNTGMLGHTCVVM 181
R P + W +L + G +F+ A+G S + D + ++FN +
Sbjct: 132 RFQAAPWHWRAWEQLTHSVRTGEASFDVANGTSFWQLTHEDPKARELFNRAXGSVSLTEA 191
Query: 182 EKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPRIKGINYDLPYVIKNAPSYLG---- 237
+V +Y F + ++ +P ++G + P V + A L
Sbjct: 192 GQVAAAYD-FSGAATAVDIGGGRGSLXAAVLDAFPGLRGTLLERPPVAEEARELLTGRGL 250
Query: 238 ---IEHVGGDFFESVPE-ADTILMKWVLSSFDDEQSLKLLKNCYKALPDGGKLLNVNVTI 293
E + GDFFE++P+ AD L+K VL +DD+ +++L+ A +LL ++ I
Sbjct: 251 ADRCEILPGDFFETIPDGADVYLIKHVLHDWDDDDVVRILRRIATAXKPDSRLLVIDNLI 310
Query: 294 PEVPENSATSREISILDTICLFQVPHGRERTKQEYSELAIKAGFK 338
E P S ++ +L + G ER++ E++ L K+G +
Sbjct: 311 DERPAASTLFVDLLLLVLVG------GAERSESEFAALLEKSGLR 349
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 211 IISKYPRIKGINYD----LPYVIKNAPSYLGIEHV---GGDFFESVPE-ADTILMKWVLS 262
I+ P +G+ D L N S L E V GGD + VP D L+ ++
Sbjct: 185 ILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIG 244
Query: 263 SFDDEQSLKLLKNCYKALPDGGKLLNVNVTIPEVPENSATSREISILDTICLFQVPHGRE 322
D+ SL+LL NC +A+ G+++ + TI +++ +S+L + LF GR
Sbjct: 245 DLDEAASLRLLGNCREAMAGDGRVVVIERTI-----SASEPSPMSVLWDVHLFMACAGRH 299
Query: 323 RTKQEYSELAIKAGF 337
RT +E +L + GF
Sbjct: 300 RTTEEVVDLLGRGGF 314
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 88/210 (41%), Gaps = 12/210 (5%)
Query: 136 LKDQILEGGTAFNKAHGMSIYDYMGVDSRFNDVFNTGMLGHTCVVMEKVLESYKGFEHXX 195
L D + G A+ +G ++ + D D F+ M + E ++Y +
Sbjct: 126 LLDVVRTGRPAYAGRYGRPFWEDLSADVALADSFDALMSCDEDLAYEAPADAYD-WSAVR 184
Query: 196 XXXXXXXXXXATLNMIISKYPRIKGINYDLPYVIKNAPSYLG-------IEHVGGDFFES 248
L I + P ++G +L + A + GDFF+
Sbjct: 185 HVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKP 244
Query: 249 VP-EADTILMKWVLSSFDDEQSLKLLKNCYKALPDGGKLLNVNVTIPEVPENSATSREIS 307
+P AD +L+ +VL ++ DE +L +L+ C +AL GG+LL ++ +V E R S
Sbjct: 245 LPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRA--DV-EGDGADRFFS 301
Query: 308 ILDTICLFQVPHGRERTKQEYSELAIKAGF 337
L + + GR RT+ E +LA AG
Sbjct: 302 TLLDLRMLTFMGGRVRTRDEVVDLAGSAGL 331
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 243 GDFFESVP-EADTILMKWVLSSFDDEQSLKLLKNCYKALPDGGKLLNVNVTIPEVPENSA 301
GDFF+ +P AD +L+ +VL ++ DE +L +L+ C +AL GG+LL ++ +V E
Sbjct: 239 GDFFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRA--DV-EGDG 295
Query: 302 TSREISILDTICLFQVPHGRERTKQEYSELAIKAGF 337
R S L + GR RT+ E +LA AG
Sbjct: 296 ADRFFSTLLDLRXLTFXGGRVRTRDEVVDLAGSAGL 331
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 212 ISKYPRIKGINYDLPYVIKNAPSYLG------IEHVGGDFF-ESVPEADTILMKWVLSSF 264
+S YP K +D+P V+ A + I+ GDFF + +PEAD ++ VL +
Sbjct: 198 MSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDW 257
Query: 265 DDEQSLKLLKNCYKALPDGGKLLNVNVTIPEVPENSATSREISILDTICLFQVPHGRERT 324
D + LL+ Y GG +L + + E ++ L ++ + G+ERT
Sbjct: 258 ADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQ----LYSLNMLVQTEGQERT 313
Query: 325 KQEYSELAIKAGFKGVNYE 343
Y L AGF+ ++
Sbjct: 314 PTHYHMLLSSAGFRDFQFK 332
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 13/211 (6%)
Query: 135 RLKDQILEGGTAFNKAHGMSIYDYMGVDSRFNDVFNTGMLGHTCVVMEKVLESYKGFEHX 194
RL D I G + +G Y+ + F++ + V + +Y + +
Sbjct: 126 RLPDAIRTGRPTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYD-WTNV 184
Query: 195 XXXXXXXXXXXATLNMIISKYPRIKGINYDLPYVIKNAPSYLG-------IEHVGGDFFE 247
I + P + ++ + A SYL ++ V GDFFE
Sbjct: 185 RHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFE 244
Query: 248 SVP-EADTILMKWVLSSFDDEQSLKLLKNCYKALPDGGKLLNVNVTIPEVPENSATSREI 306
+P +AD I++ +VL ++ D ++++L C +AL GG++L ++ ENS + +
Sbjct: 245 PLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD--DLHENS-FNEQF 301
Query: 307 SILDTICLFQVPHGRERTKQEYSELAIKAGF 337
+ LD L + G RT++++ LA AG
Sbjct: 302 TELDLRMLVFL-GGALRTREKWDGLAASAGL 331
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 23/273 (8%)
Query: 74 LDRVLRLLVSYNALHCSFVDGQRLYSLASVAKYFVRNNQNGASLRPYMALRLDKVPMDYW 133
LDR+LR LV A+ DGQ +Y L + + + A R ++ + D
Sbjct: 55 LDRLLRHLV---AVGLFTRDGQGVYGLTEFGEQL--RDDHAAGKRKWLDMNSAVGRGDLG 109
Query: 134 F-RLKDQILEGGTAFNKAHGMSIYDYMGVDSRFNDVFNTGMLGHTCVVMEKVLESYKGFE 192
F L I G A+ +G S ++ +G D + F+T M H + + Y +
Sbjct: 110 FVELAHSIRTGQPAYPVRYGTSFWEDLGSDPVLSASFDTLMSHHLELDYTGIAAKYD-WA 168
Query: 193 HXXXXXXXXXXXXATLNMIISKYPRIKGINYDLPYVIKNAPSYL---GI----EHVGGDF 245
L+ +++ + + G DL A G+ + V G F
Sbjct: 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSF 228
Query: 246 FESVPE-ADTILMKWVLSSFDDEQSLKLLKNCYKALPDGGKLLNVNVTIPEVPENSATSR 304
F+ +P A ++ VL +DD ++ +L+ C +A GG +L + + E++ T
Sbjct: 229 FDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD--EHAGTGM 286
Query: 305 EISILDTICLFQVPHGRERTKQEYSELAIKAGF 337
++ +L G+ER+ E ELA +AG
Sbjct: 287 DLRMLTYFG------GKERSLAELGELAAQAGL 313
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 247 ESVPEADTILMKWVLSSFDDEQSLKLLKNCYKALPDGGKLLNVNVTI--PEVPENSATSR 304
ES PEAD +L +L S +++ S + K + A+ GG+LL +++ I PE P S
Sbjct: 252 ESYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSH 311
Query: 305 EISILDTICLFQVPHGRERTKQEYSELAIKAGFKGVN 341
IL F V +E+ + Y E+ G+K V
Sbjct: 312 --YILGAGMPFSVLGFKEQAR--YKEILESLGYKDVT 344
>pdb|4H0O|A Chain A, Crystal Structure Of Acetate Kinase From Entamoeba
Histolytica
pdb|4H0O|B Chain B, Crystal Structure Of Acetate Kinase From Entamoeba
Histolytica
Length = 404
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 262 SSFDDEQSLKLLKNCYKALP--DGGKLLNVNVTIPEVPENSATSREISILDTICLFQVPH 319
S+ DE LK LK C P + + +++ E+P T+R+ +DT +
Sbjct: 108 SAVIDEVVLKELKECLPLAPIHNPSSFGVIEISMKELP----TTRQYVAIDTAFHSTISQ 163
Query: 320 GRERT---KQEYSELAIKAGFKGVNYEY 344
ERT Q Y +K GF G++YEY
Sbjct: 164 A-ERTYAIPQPYQSQYLKFGFHGLSYEY 190
>pdb|3MCZ|A Chain A, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis.
pdb|3MCZ|B Chain B, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis
Length = 352
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 11/112 (9%)
Query: 208 LNMIISKYPRIKGINYDLPYVIKNAPSYLGIEHVGG--DFFES---------VPEADTIL 256
L ++ ++P++ G +DLP A + +GG +FFE AD +
Sbjct: 194 LAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVX 253
Query: 257 MKWVLSSFDDEQSLKLLKNCYKALPDGGKLLNVNVTIPEVPENSATSREISI 308
+ L FD ++ +++ + + GG LL + T + A S + S+
Sbjct: 254 LNDCLHYFDAREAREVIGHAAGLVKPGGALLILTXTXNDDRVTPALSADFSL 305
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,163,780
Number of Sequences: 62578
Number of extensions: 407635
Number of successful extensions: 917
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 872
Number of HSP's gapped (non-prelim): 25
length of query: 356
length of database: 14,973,337
effective HSP length: 100
effective length of query: 256
effective length of database: 8,715,537
effective search space: 2231177472
effective search space used: 2231177472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)