Query 018406
Match_columns 356
No_of_seqs 315 out of 2734
Neff 8.5
Searched_HMMs 13730
Date Mon Mar 25 14:46:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018406.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018406hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pw4a_ f.38.1.1 (A:) Glycerol 99.7 1.6E-16 1.2E-20 150.6 16.5 157 91-279 46-203 (447)
2 d1pw4a_ f.38.1.1 (A:) Glycerol 99.5 4.4E-13 3.2E-17 126.4 19.0 181 66-276 246-427 (447)
3 d1pv7a_ f.38.1.2 (A:) Lactose 99.5 8E-13 5.8E-17 121.8 17.3 179 69-277 7-185 (417)
4 d1pv7a_ f.38.1.2 (A:) Lactose 99.4 2.2E-12 1.6E-16 118.8 14.5 143 102-279 256-399 (417)
5 d1u7ga_ f.44.1.1 (A:) Ammonium 15.0 3.2E+02 0.023 22.9 15.2 64 69-140 194-257 (383)
6 d1o82a_ a.64.2.1 (A:) Bacterio 8.6 89 0.0065 18.8 1.9 25 97-121 2-26 (70)
7 d3b45a1 f.51.1.1 (A:91-270) Gl 7.9 3.5E+02 0.025 19.3 6.0 34 123-156 69-102 (180)
8 d2iuba2 f.17.3.1 (A:286-349) M 5.5 1.9E+02 0.014 17.2 2.5 7 258-264 38-44 (64)
9 d1rzhh2 f.23.10.1 (H:11-35) Ph 4.8 2.3E+02 0.017 13.7 3.7 16 84-99 9-24 (26)
10 d3b60a2 f.37.1.1 (A:10-328) Mu 4.0 7.1E+02 0.051 18.3 9.2 15 67-81 14-28 (319)
No 1
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=99.69 E-value=1.6e-16 Score=150.61 Aligned_cols=157 Identities=11% Similarity=0.045 Sum_probs=131.4
Q ss_pred HHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCcc
Q 018406 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (356)
Q Consensus 91 ~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~~~~G~lsD~~~GRr~~i~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 170 (356)
.+..+++ ++|++..+.+++.+++.++..++.+++|+++||+ |||+++.++.++..++.++++++....
T Consensus 46 ~~~p~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~---------- 113 (447)
T d1pw4a_ 46 LAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWAT---------- 113 (447)
T ss_dssp HHHHHTT-SSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHCHHHH----------
T ss_pred HHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHhhccccchhh----------
Confidence 3445665 6899999999999999999999999999999998 999999999999998888877643210
Q ss_pred ccccccCCCCCcchhhHHHHHHHHHHHHHhhhchhhhhhhhhhccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 018406 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (356)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~p~i~~ 250 (356)
.+...+++.|++.|++.|...+...++++|.+|+++ |+..+++++.+..+|..+++.+.+
T Consensus 114 --------------~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~~~~ 173 (447)
T d1pw4a_ 114 --------------SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGIPPLLFL 173 (447)
T ss_dssp --------------SSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTH------HHHHHHHHHHHHHHHHTSHHHHHH
T ss_pred --------------hhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhc------ccccccccccccchhhhhhhhhhh
Confidence 135678899999999999999999999999999877 999999999999999999999888
Q ss_pred HHHhhc-chhHHHHHHHHHHHHHHHHHHhh
Q 018406 251 YIQMEH-GWGSAFGALAIAMGISNMLFFIG 279 (356)
Q Consensus 251 ~i~~~~-gw~~~f~i~~~~~~i~~~~~~~~ 279 (356)
++.... +|++.|++.+++.++..++.+..
T Consensus 174 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 203 (447)
T d1pw4a_ 174 LGMAWFNDWHAALYMPAFCAILVALFAFAM 203 (447)
T ss_dssp HHHHHTCCSTTCTHHHHHHHHHHHHHHHHH
T ss_pred hHhhhhhcccccchhhhhhHHHHHHHHHHh
Confidence 876655 69999888777765555444443
No 2
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=99.49 E-value=4.4e-13 Score=126.41 Aligned_cols=181 Identities=15% Similarity=0.048 Sum_probs=137.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 018406 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (356)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~~~~G~lsD~~~GRr~~i~~~~~l 145 (356)
.+.+.++.+....++.....+++..+++.|+.+.++++..+.+.......++..++.+++|+++||+ +|++......+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~ 324 (447)
T d1pw4a_ 246 LPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FRGNRGATGVFF 324 (447)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTCHHHHHHHH
T ss_pred HcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhc-cccccccccchh
Confidence 3456678888888888888888999999999999999999999999999999999999999999998 876544433333
Q ss_pred HHHHHHHHHHHhhccccCCCCCCccccccccCCCCCcchhhHHHHHHHHHHHHHhhhchhhhhhhhhhccCCCCChhhhh
Q 018406 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (356)
Q Consensus 146 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~~~~~ 225 (356)
..+..+....... .+ ..+....++..++.|++.++..+....+..|.+|++.
T Consensus 325 ~~~~~~~~~~~~~----~~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~----- 376 (447)
T d1pw4a_ 325 MTLVTIATIVYWM----NP-------------------AGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKA----- 376 (447)
T ss_dssp HHHHHHHHHHTTS----CC-------------------TTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTH-----
T ss_pred HHHHHHHHHHHHh----cc-------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH-----
Confidence 3322222222110 00 1145666677778888888888888999999999876
Q ss_pred hhhhHHHHHHHHHHH-HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 018406 226 HLDRFFNFFYLSVTV-GAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (356)
Q Consensus 226 ~r~~~~~~~~~~~~i-G~~i~p~i~~~i~~~~gw~~~f~i~~~~~~i~~~~~ 276 (356)
++...++.+...++ |..++|.+.+++.+..||+..|++.+++.+++.+++
T Consensus 377 -~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 427 (447)
T d1pw4a_ 377 -AGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILL 427 (447)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 89999998887776 456789999999999999988887766655554443
No 3
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=99.46 E-value=8e-13 Score=121.81 Aligned_cols=179 Identities=12% Similarity=-0.093 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 018406 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (356)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~~~~G~lsD~~~GRr~~i~~~~~l~~~ 148 (356)
|..|.+.+..++..+....+...++.|+++++|.+..+.+++.+++.++..++.+++|+++||+ |||++++++.++..+
T Consensus 7 ~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~-grr~~l~~~~~~~~~ 85 (417)
T d1pv7a_ 7 TNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL-GLRKYLLWIITGMLV 85 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH-TTCTHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 4577777777877777777777889999999999999999999999999999999999999998 999999999888888
Q ss_pred HHHHHHHHhhccccCCCCCCccccccccCCCCCcchhhHHHHHHHHHHHHHhhhchhhhhhhhhhccCCCCChhhhhhhh
Q 018406 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (356)
Q Consensus 149 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~~~~~~r~ 228 (356)
+.+++.+....+ ......++.+.+.+.+.+...........+..+++. .++.
T Consensus 86 ~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 137 (417)
T d1pv7a_ 86 MFAPFFIFIFGP------------------------LLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVS----RRSN 137 (417)
T ss_dssp THHHHHHHTHHH------------------------HHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHH----HHHS
T ss_pred HHHHHHHhhhhh------------------------hHHHHHHHHHHHhhhcccccccchhhcccccccchh----hhhH
Confidence 777766643100 011112223333333333332222222222222111 1244
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 018406 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (356)
Q Consensus 229 ~~~~~~~~~~~iG~~i~p~i~~~i~~~~gw~~~f~i~~~~~~i~~~~~~ 277 (356)
...+........+..+++.+++++.+.. |+..+.+......+..++.+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~ 185 (417)
T d1pv7a_ 138 FEFGRARMFGCVGWALGASIVGIMFTIN-NQFVFWLGSGCALILAVLLF 185 (417)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhcccccccccccccccccc-ccccccchhhHHHHHHHHHH
Confidence 4455556667778888888888877654 44445444444333333333
No 4
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=99.38 E-value=2.2e-12 Score=118.82 Aligned_cols=143 Identities=10% Similarity=0.039 Sum_probs=117.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCccccccccCCCCC
Q 018406 102 KSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEP 181 (356)
Q Consensus 102 ~s~~~a~~~~~~~~~~~~~~~~~~G~lsD~~~GRr~~i~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (356)
.+....+.......++..++.++.+++.||+ ||++++.++.++..++.+++.+..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 310 (417)
T d1pv7a_ 256 QGTRVFGYVTTMGELLNASIMFFAPLIINRI-GGKNALLLAGTIMSVRIIGSSFAT------------------------ 310 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHTCC------------------------
T ss_pred cchhhhcccccccccccccchhhhhhhhccc-ccccchhhhHHHHHHhhhcccccc------------------------
Confidence 3445566777778888889999999999998 999999999888887776665431
Q ss_pred cchhhHHHHHHHHHHHHHhhhchhhhhhhhhhccCCCCChhhhhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHhhcchhH
Q 018406 182 AKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFF-YLSVTVGAIVAFTLVVYIQMEHGWGS 260 (356)
Q Consensus 182 ~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~-~~~~~iG~~i~p~i~~~i~~~~gw~~ 260 (356)
+.+.+++..++.|++.+...+...+++.|.+|++. |++.+++. ++...+|..++|.+.|++.+..|+++
T Consensus 311 ----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~~ 380 (417)
T d1pv7a_ 311 ----SALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRF------SATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQG 380 (417)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGG------HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred ----ccchhhHHHHHHHHHHHHHHHHHHHHHHHHCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Confidence 46677778888999999999999999999999887 88888875 45667999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 018406 261 AFGALAIAMGISNMLFFIG 279 (356)
Q Consensus 261 ~f~i~~~~~~i~~~~~~~~ 279 (356)
.|++.+++.++..++..+.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~ 399 (417)
T d1pv7a_ 381 AYLVLGLVALGFTLISVFT 399 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9988877766655554443
No 5
>d1u7ga_ f.44.1.1 (A:) Ammonium transporter AmtB {Escherichia coli [TaxId: 562]}
Probab=14.99 E-value=3.2e+02 Score=22.95 Aligned_cols=64 Identities=11% Similarity=0.100 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 018406 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (356)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~~~~G~lsD~~~GRr~~i~ 140 (356)
.......+..++--+.++++... .....+.... ...+....+..+..++..+.|++..+|+.+.
T Consensus 194 ~~~~~~~lG~~iLw~gW~gFN~g------s~~~~~~~~~--~~~~nt~~a~a~~~~~~~~~~~~~~~k~~~~ 257 (383)
T d1u7ga_ 194 HNLPMVFTGTAILYIGWFGFNAG------SAGTANEIAA--LAFVNTVVATAAAILGWIFGEWALRGLPSLL 257 (383)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHG------GGSSSSHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred CChhhhhHHHHHHHHHHHHhccc------cccccchHHH--HHHHHHHhHHHHHHHHHHHHHHHhcCCCCHH
Confidence 45566666666666677666442 2333333322 2222233333445555566777644554333
No 6
>d1o82a_ a.64.2.1 (A:) Bacteriocin AS-48 {Enterococcus faecalis [TaxId: 1351]}
Probab=8.64 E-value=89 Score=18.85 Aligned_cols=25 Identities=8% Similarity=-0.164 Sum_probs=16.2
Q ss_pred HHhcCCChHHHHHHHHHHHHHHHHH
Q 018406 97 FYVMHKSFADSSNAVNNFLGISQAS 121 (356)
Q Consensus 97 ~~~~~~s~~~a~~~~~~~~~~~~~~ 121 (356)
.++||.+.+.++.++++...+..+.
T Consensus 2 akefgipa~ia~~vlniv~agg~vt 26 (70)
T d1o82a_ 2 AKEFGIPAAVAGTVLNVVEAGGWVT 26 (70)
T ss_dssp HHHHCCCHHHHHHHHHHHHTTCCHH
T ss_pred chhhCCcHHHHHHHHHhhccCcchh
Confidence 4678888887777776655444333
No 7
>d3b45a1 f.51.1.1 (A:91-270) GlpG {Escherichia coli [TaxId: 562]}
Probab=7.87 E-value=3.5e+02 Score=19.34 Aligned_cols=34 Identities=18% Similarity=-0.152 Sum_probs=20.5
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 018406 123 VLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (356)
Q Consensus 123 ~~~G~lsD~~~GRr~~i~~~~~l~~~g~~~~~~~ 156 (356)
...|..-++.+|+++.+.+-.+..+++.+...+.
T Consensus 69 ~~~G~~lE~~~G~~~~~~~~~~~~~~g~l~~~~~ 102 (180)
T d3b45a1 69 WYLGGAVEKRLGSGKLIVITLISALLSGYVQQKF 102 (180)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccchhheeeeeHHHHHHHHHHHHH
Confidence 3345555555599887766666655555554443
No 8
>d2iuba2 f.17.3.1 (A:286-349) Magnesium transport protein CorA {Thermotoga maritima [TaxId: 2336]}
Probab=5.47 E-value=1.9e+02 Score=17.23 Aligned_cols=7 Identities=14% Similarity=0.662 Sum_probs=1.3
Q ss_pred hhHHHHH
Q 018406 258 WGSAFGA 264 (356)
Q Consensus 258 w~~~f~i 264 (356)
|.++|++
T Consensus 38 ~~~~~~~ 44 (64)
T d2iuba2 38 WKWGYPV 44 (64)
T ss_dssp ----CHH
T ss_pred ccHHHHH
Confidence 3344443
No 9
>d1rzhh2 f.23.10.1 (H:11-35) Photosystem II reaction centre subunit H, transmembrane region {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=4.81 E-value=2.3e+02 Score=13.72 Aligned_cols=16 Identities=0% Similarity=0.235 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHh
Q 018406 84 AYFGLSVNMVTFMFYV 99 (356)
Q Consensus 84 ~~~~~~~~l~~yl~~~ 99 (356)
.|+++...++.|++.+
T Consensus 9 ~fw~ffalli~ylqte 24 (26)
T d1rzhh2 9 SFWIFLAGLIYYLQTE 24 (26)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc
Confidence 4455556677777654
No 10
>d3b60a2 f.37.1.1 (A:10-328) Multidrug resistance ABC transporter MsbA, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=4.03 E-value=7.1e+02 Score=18.30 Aligned_cols=15 Identities=0% Similarity=-0.412 Sum_probs=6.3
Q ss_pred ChHHHHHHHHHHHHH
Q 018406 67 GWIAALFIFGNEMAE 81 (356)
Q Consensus 67 ~~~~~~~~~~~~~~~ 81 (356)
+|+.+...++..++.
T Consensus 14 ~k~~l~~~~i~~~~~ 28 (319)
T d3b60a2 14 FKAGLIVAGIALILN 28 (319)
T ss_dssp GHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444443333
Done!